Citrus Sinensis ID: 022865
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 291 | 2.2.26 [Sep-21-2011] | |||||||
| A2XAZ3 | 381 | Alcohol dehydrogenase cla | N/A | no | 0.996 | 0.761 | 0.931 | 1e-159 | |
| Q0DWH1 | 381 | Alcohol dehydrogenase cla | yes | no | 0.996 | 0.761 | 0.927 | 1e-159 | |
| Q96533 | 379 | Alcohol dehydrogenase cla | yes | no | 1.0 | 0.767 | 0.917 | 1e-158 | |
| P93629 | 381 | Alcohol dehydrogenase cla | N/A | no | 0.993 | 0.758 | 0.927 | 1e-156 | |
| P80572 | 378 | Alcohol dehydrogenase cla | N/A | no | 0.996 | 0.767 | 0.879 | 1e-150 | |
| P79896 | 376 | Alcohol dehydrogenase cla | N/A | no | 0.982 | 0.760 | 0.700 | 1e-117 | |
| P81600 | 375 | Alcohol dehydrogenase cla | N/A | no | 0.979 | 0.76 | 0.678 | 1e-113 | |
| P81601 | 375 | Alcohol dehydrogenase cla | N/A | no | 0.993 | 0.770 | 0.665 | 1e-111 | |
| P11766 | 374 | Alcohol dehydrogenase cla | yes | no | 0.965 | 0.751 | 0.702 | 1e-111 | |
| P12711 | 374 | Alcohol dehydrogenase cla | yes | no | 0.965 | 0.751 | 0.705 | 1e-111 |
| >sp|A2XAZ3|ADHX_ORYSI Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 562 bits (1448), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/290 (93%), Positives = 279/290 (96%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST+GQVITCKAAVAWE NKP+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 293
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Oryza sativa subsp. indica (taxid: 39946) EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8EC: 4 |
| >sp|Q0DWH1|ADHX_ORYSJ Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 561 bits (1446), Expect = e-159, Method: Compositional matrix adjust.
Identities = 269/290 (92%), Positives = 279/290 (96%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST+GQVITCKAAVAWE N+P+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 293
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Oryza sativa subsp. japonica (taxid: 39947) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|Q96533|ADHX_ARATH Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 556 bits (1434), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/291 (91%), Positives = 279/291 (95%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M+T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVRIKIL+TALCHTDAYTWSGKDPE
Sbjct: 1 MATQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFPCILGHEAAGIVESVGEGVTEVQ GDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61 GLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSAT 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G G+MMNDRKSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APLDKVCLLGCGVP
Sbjct: 121 GVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVP 180
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TGLGAVWNTAKVEPGS VA+FGLGTVGLAVAEGAK AGASR+IGIDID KK++ AK FGV
Sbjct: 181 TGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV 240
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQ+V+VDLTDGGVDYSFECIGNVSVMRAALECCHK GT
Sbjct: 241 NEFVNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 291
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Plays a central role in formaldehyde detoxification. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P93629|ADHX_MAIZE Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1 | Back alignment and function description |
|---|
Score = 551 bits (1421), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/289 (92%), Positives = 278/289 (96%)
Query: 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
T+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEGL
Sbjct: 5 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGL 64
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
FPCILGHEAAGIVESVGEGVT+VQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG
Sbjct: 65 FPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGV 124
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPTG
Sbjct: 125 GVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTG 184
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
LGAVWNTAKVE GS+VAVFGLGTVGLAVAEGAKAAGASRVIGIDID KKFD AKNFGVTE
Sbjct: 185 LGAVWNTAKVESGSVVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDNKKFDVAKNFGVTE 244
Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
FVNPK+HDKPIQQVLVDLTDGGVDYSFECIGNVS+MRAALEC K GT
Sbjct: 245 FVNPKEHDKPIQQVLVDLTDGGVDYSFECIGNVSIMRAALECSDKGWGT 293
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Zea mays (taxid: 4577) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P80572|ADHX_PEA Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1 | Back alignment and function description |
|---|
Score = 532 bits (1371), Expect = e-150, Method: Compositional matrix adjust.
Identities = 255/290 (87%), Positives = 272/290 (93%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+T+GQVITCKAAVAWEPNKPL IEDV+VAPPQA EVRI+ILFTALCHTDAYT GKDPEG
Sbjct: 1 ATQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEG 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAGIVESVGEGVT+V+PGDHVIP YQAEC ECKFCKS KTNLCGKVR ATG
Sbjct: 61 LFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATG 120
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMM DRKSRFS+ GKPIYHFMGTSTFSQYTVVHDVSVAKI P APLDKVCLLGCGVPT
Sbjct: 121 VGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPT 180
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVEPGSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID K+D AKNFGVT
Sbjct: 181 GLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSNKYDTAKNFGVT 240
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EF+NPKDH+KPIQQV++DLTDGGVDYSFEC+GNVSVMR+ALECCHK GT
Sbjct: 241 EFINPKDHEKPIQQVIIDLTDGGVDYSFECLGNVSVMRSALECCHKGWGT 290
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Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Pisum sativum (taxid: 3888) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P79896|ADHX_SPAAU Alcohol dehydrogenase class-3 OS=Sparus aurata PE=2 SV=1 | Back alignment and function description |
|---|
Score = 420 bits (1079), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/287 (70%), Positives = 234/287 (81%), Gaps = 1/287 (0%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M T G+VI CKAAVAWEP KPL IE+V+VAPP A EVRIK+ T +CHTDAYT SG DPE
Sbjct: 1 METAGKVIKCKAAVAWEPGKPLSIEEVEVAPPNAHEVRIKLFATGVCHTDAYTLSGSDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFP ILGHE AG VESVGEGVT+ +PGD VIP Y +C ECKFCK+ KTNLC K+R
Sbjct: 61 GLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRITQ 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G G ++ D+ SRF+ GK ++HFMGTSTFS+YTVV D+S+AK++ +AP+DKVCLLGCG+
Sbjct: 121 GQG-LLPDKTSRFTCKGKQVFHFMGTSTFSEYTVVADISLAKVNEKAPMDKVCLLGCGIS 179
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TG GA NTAKVEPGS AVFGLG VGLAV G K AGA+R+IGID++P KF+ AK FG
Sbjct: 180 TGYGAALNTAKVEPGSTCAVFGLGAVGLAVIMGCKVAGATRIIGIDLNPAKFETAKEFGA 239
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
TEFVNPKDH KPIQ+VLV++TDGGVDYSFECIGNV +MRAALE CHK
Sbjct: 240 TEFVNPKDHSKPIQEVLVEMTDGGVDYSFECIGNVQIMRAALEACHK 286
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Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Sparus aurata (taxid: 8175) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P81600|ADHH_GADMO Alcohol dehydrogenase class-3 chain H OS=Gadus morhua PE=1 SV=1 | Back alignment and function description |
|---|
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/286 (67%), Positives = 232/286 (81%), Gaps = 1/286 (0%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+T GQVI CKAAVAWE KPL +E+V+VAPP+AGEVRIK++ T +CHTDAYT SG DPEG
Sbjct: 1 ATAGQVIKCKAAVAWEAGKPLSLEEVEVAPPRAGEVRIKVVATGVCHTDAYTLSGSDPEG 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
FP ILGHE AG+VESVGEGVT+ + GD VIP Y +C ECKFCK+ KTNLC K+R G
Sbjct: 61 AFPVILGHEGAGLVESVGEGVTKFKAGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQG 120
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
G +M D SRF+ GK ++HFMGTSTFS+YTVV D+S+A +DP+APLDKVCLLGCG+ T
Sbjct: 121 RG-LMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVADISLANVDPKAPLDKVCLLGCGIST 179
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
G GA NTAKVEPGS AVFGLG VGLA G K AGA+R+IG+DI+P+KF +A FG T
Sbjct: 180 GYGAALNTAKVEPGSTCAVFGLGAVGLAAIMGCKVAGATRIIGVDINPEKFGKAAEFGAT 239
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
E +NPKDH +P+Q+VLV++TDGGVDYSFECIGNV +MR+ALE CHK
Sbjct: 240 ECLNPKDHARPVQEVLVEMTDGGVDYSFECIGNVEIMRSALEACHK 285
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Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Gadus morhua (taxid: 8049) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P81601|ADHL_GADMO Alcohol dehydrogenase class-3 chain L OS=Gadus morhua PE=1 SV=1 | Back alignment and function description |
|---|
Score = 402 bits (1032), Expect = e-111, Method: Compositional matrix adjust.
Identities = 193/290 (66%), Positives = 233/290 (80%), Gaps = 1/290 (0%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+T G+ I C+AAVAWE KPL +E+V+VAPPQAGEVRIKI+ T +CHTDAYT SG DPEG
Sbjct: 1 ATVGKTIRCRAAVAWEAGKPLSMEEVEVAPPQAGEVRIKIVATGICHTDAYTLSGSDPEG 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
+FP +LGHE AGIVESVGEGVT+ + GD VIP Y +C ECKFCK+ KTNLC K+R G
Sbjct: 61 VFPSVLGHEGAGIVESVGEGVTKFKSGDAVIPLYVPQCGECKFCKNPKTNLCQKIRLTQG 120
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
G+M N SRFS NG+ ++HFMG+STFS+YTVV ++S+AK+ +APLDKVCLLGC + T
Sbjct: 121 KGLMPNG-TSRFSCNGQVLFHFMGSSTFSEYTVVAEISLAKVHEKAPLDKVCLLGCAIST 179
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
G GA NTAKVE GS AVFGLG +GLAV G +AAGASR+I ID++P KF AK FG T
Sbjct: 180 GYGAALNTAKVEAGSTCAVFGLGALGLAVIMGCQAAGASRIIAIDVNPDKFRIAKEFGAT 239
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
+ VNPKDH KP++QVLV++TDGGVDYSFEC+GN++VMRAALE CHK GT
Sbjct: 240 DLVNPKDHSKPVEQVLVEMTDGGVDYSFECVGNIAVMRAALEACHKGWGT 289
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Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Gadus morhua (taxid: 8049) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P11766|ADHX_HUMAN Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4 | Back alignment and function description |
|---|
Score = 401 bits (1031), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/282 (70%), Positives = 228/282 (80%), Gaps = 1/282 (0%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
+VI CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
NTAK+EPGS+ AVFGLG VGLAV G K AGASR+IG+DI+ KF RAK FG TE +N
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 284
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
| >sp|P12711|ADHX_RAT Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/282 (70%), Positives = 226/282 (80%), Gaps = 1/282 (0%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
QVI CKAAVAWE KPL IE+++VAPPQA EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 4 QVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRF+ GKPI HFMGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
NTAKVEPGS AVFGLG VGLAV G K AGASR+IGIDI+ KF +AK FG TE +N
Sbjct: 183 AVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGIDINKDKFAKAKEFGATECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P+D K IQ+VL+++TDGGVD+SFECIGNV VMR+ALE HK
Sbjct: 243 PQDFSKSIQEVLIEMTDGGVDFSFECIGNVKVMRSALEAAHK 284
|
Class-III ADH is remarkably ineffective in oxidizing ethanol, but it readily catalyzes the oxidation of long-chain primary alcohols and the oxidation of S-(hydroxymethyl) glutathione. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 1 EC: . EC: 1 EC: . EC: 2 EC: 8 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 291 | ||||||
| 353703786 | 379 | alcohol dehydrogenase class III [Solanum | 1.0 | 0.767 | 0.931 | 1e-160 | |
| 433286663 | 396 | Chain A, Crystal Structure Of S-nitrosog | 0.996 | 0.732 | 0.931 | 1e-159 | |
| 224065517 | 379 | glutathione-dependent formaldehyde dehyd | 1.0 | 0.767 | 0.931 | 1e-159 | |
| 429840534 | 378 | alcohol dehydrogenase 2 [Diospyros kaki] | 1.0 | 0.769 | 0.934 | 1e-159 | |
| 242063486 | 381 | hypothetical protein SORBIDRAFT_04g03705 | 0.996 | 0.761 | 0.941 | 1e-158 | |
| 255585914 | 379 | alcohol dehydrogenase, putative [Ricinus | 1.0 | 0.767 | 0.931 | 1e-158 | |
| 148886774 | 381 | RecName: Full=Alcohol dehydrogenase clas | 0.996 | 0.761 | 0.931 | 1e-158 | |
| 82400134 | 379 | alcohol dehydrogenase class III-like pro | 1.0 | 0.767 | 0.917 | 1e-157 | |
| 115449589 | 381 | Os02g0815500 [Oryza sativa Japonica Grou | 0.996 | 0.761 | 0.927 | 1e-157 | |
| 1675394 | 381 | class III ADH enzyme [Oryza sativa Indic | 0.996 | 0.761 | 0.927 | 1e-157 |
| >gi|353703786|ref|NP_001238796.1| alcohol dehydrogenase class III [Solanum lycopersicum] gi|283825505|gb|ADB43258.1| alcohol dehydrogenase class III [Solanum lycopersicum] gi|322719690|gb|ADX07743.1| alcohol dehydrogenase class III [Solanum habrochaites] gi|322719692|gb|ADX07744.1| alcohol dehydrogenase class III [Solanum chmielewskii] | Back alignment and taxonomy information |
|---|
Score = 570 bits (1468), Expect = e-160, Method: Compositional matrix adjust.
Identities = 271/291 (93%), Positives = 285/291 (97%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M+T+GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPE
Sbjct: 1 MATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFPC+LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61 GLFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVP 180
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGV
Sbjct: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 240
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TEF+NPK+H++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 241 TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 291
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|433286663|pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ gi|433286664|pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ gi|433286665|pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase Apoenzyme From Tomato (solanum Lycopersicum) gi|433286666|pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase Apoenzyme From Tomato (solanum Lycopersicum) gi|433286667|pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) Crystallized In Presence Of Nadh And Glutathione gi|433286668|pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) Crystallized In Presence Of Nadh And Glutathione | Back alignment and taxonomy information |
|---|
Score = 568 bits (1463), Expect = e-159, Method: Compositional matrix adjust.
Identities = 270/290 (93%), Positives = 284/290 (97%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+T+GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPEG
Sbjct: 19 ATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEG 78
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPC+LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 79 LFPCVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 138
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVPT
Sbjct: 139 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPT 198
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGVT
Sbjct: 199 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVT 258
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EF+NPK+H++PIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 259 EFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 308
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224065517|ref|XP_002301836.1| glutathione-dependent formaldehyde dehydrogenase [Populus trichocarpa] gi|222843562|gb|EEE81109.1| glutathione-dependent formaldehyde dehydrogenase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 566 bits (1459), Expect = e-159, Method: Compositional matrix adjust.
Identities = 271/291 (93%), Positives = 282/291 (96%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M+T+GQVITC+AAVAWE NKPLVIE+VQVAPPQAGEVR+KILF ALCHTDAYTWSGKDPE
Sbjct: 1 MATQGQVITCRAAVAWEANKPLVIEEVQVAPPQAGEVRVKILFAALCHTDAYTWSGKDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRTAT 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVP 180
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TGLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK AGASR+IGIDID KKFDRAK+FGV
Sbjct: 181 TGLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKFDRAKDFGV 240
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TEFVNPKDHDKPIQQVL+DLTDGGVDYSFECIGNVSVMRAALECCHK GT
Sbjct: 241 TEFVNPKDHDKPIQQVLIDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 291
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|429840534|gb|AGA15794.1| alcohol dehydrogenase 2 [Diospyros kaki] | Back alignment and taxonomy information |
|---|
Score = 566 bits (1458), Expect = e-159, Method: Compositional matrix adjust.
Identities = 272/291 (93%), Positives = 281/291 (96%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M+T+GQVITCKAAVAWEPNKPL IEDVQVAPPQAGEVRI+ILFTALCHTDAYTWSGKDPE
Sbjct: 1 MATQGQVITCKAAVAWEPNKPLAIEDVQVAPPQAGEVRIQILFTALCHTDAYTWSGKDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFPCILGHEAAGIVESVGEGVTEV PGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61 GLFPCILGHEAAGIVESVGEGVTEVHPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G GVMMNDRKSRFSING PIYHFMGTSTFSQYTVVHDVSVAKIDP APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGTPIYHFMGTSTFSQYTVVHDVSVAKIDPIAPLEKVCLLGCGVP 180
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TGLGAVWNTAKVEPGSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGV
Sbjct: 181 TGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDTAKNFGV 240
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 241 TEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 291
|
Source: Diospyros kaki Species: Diospyros kaki Genus: Diospyros Family: Ebenaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|242063486|ref|XP_002453032.1| hypothetical protein SORBIDRAFT_04g037050 [Sorghum bicolor] gi|241932863|gb|EES06008.1| hypothetical protein SORBIDRAFT_04g037050 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 273/290 (94%), Positives = 281/290 (96%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST+GQVITCKAAVA+EPNKPLVIEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4 STQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAG+VESVGEGVTEVQPGDHVIPCYQAEC+ECKFCKSGKTNLCGKVR ATG
Sbjct: 64 LFPCILGHEAAGVVESVGEGVTEVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATG 123
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMND KSRFS+NGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGVPT
Sbjct: 124 VGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPT 183
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVE GSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDNKKFDVAKNFGVT 243
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK GT
Sbjct: 244 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 293
|
Source: Sorghum bicolor Species: Sorghum bicolor Genus: Sorghum Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585914|ref|XP_002533630.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223526488|gb|EEF28759.1| alcohol dehydrogenase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1452), Expect = e-158, Method: Compositional matrix adjust.
Identities = 271/291 (93%), Positives = 284/291 (97%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M+T+GQVI CKAAVA+EPNKPLVIEDVQVAPPQAGEVR++ILFTALCHTDAYTWSGKDPE
Sbjct: 1 MATQGQVIICKAAVAYEPNKPLVIEDVQVAPPQAGEVRVQILFTALCHTDAYTWSGKDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR+CKFCKSGKTNLCGKVR AT
Sbjct: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRDCKFCKSGKTNLCGKVRAAT 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP+APL+KVCLLGCGVP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVP 180
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TGLGAVWNTAKVE GSIVAVFGLGTVGLAVAEGAKAAGASR+IGIDID KK+DRAK+FGV
Sbjct: 181 TGLGAVWNTAKVEAGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKYDRAKDFGV 240
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TEFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 241 TEFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 291
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|148886774|sp|A2XAZ3.1|ADHX_ORYSI RecName: Full=Alcohol dehydrogenase class-3; AltName: Full=Alcohol dehydrogenase class-III; AltName: Full=Glutathione-dependent formaldehyde dehydrogenase; Short=FALDH; Short=FDH; Short=GSH-FDH; AltName: Full=S-(hydroxymethyl)glutathione dehydrogenase gi|125541608|gb|EAY88003.1| hypothetical protein OsI_09425 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1448), Expect = e-158, Method: Compositional matrix adjust.
Identities = 270/290 (93%), Positives = 279/290 (96%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST+GQVITCKAAVAWE NKP+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 293
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|82400134|gb|ABB72806.1| alcohol dehydrogenase class III-like protein [Solanum tuberosum] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 267/291 (91%), Positives = 282/291 (96%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M+T+GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVR+K+L+TALCHTDAYTWSGKDPE
Sbjct: 1 MATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFP +LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR AT
Sbjct: 61 GLFPSVLGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAAT 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD SVA+IDP APL+KVCLLGC VP
Sbjct: 121 GVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDGSVARIDPAAPLEKVCLLGCWVP 180
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TGLGAVWNTAKVEPGSIVA+FGLGTVGLAVAEGAKAAGASR+IGIDID KKFDRAKNFGV
Sbjct: 181 TGLGAVWNTAKVEPGSIVAIFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGV 240
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TEF+NPK+H++PIQQV+VDLTDGGVDYSFECIGNVSVMRAALECCHK GT
Sbjct: 241 TEFINPKEHEQPIQQVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGT 291
|
Source: Solanum tuberosum Species: Solanum tuberosum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115449589|ref|NP_001048503.1| Os02g0815500 [Oryza sativa Japonica Group] gi|122170808|sp|Q0DWH1.1|ADHX_ORYSJ RecName: Full=Alcohol dehydrogenase class-3; AltName: Full=Alcohol dehydrogenase class-III; AltName: Full=Glutathione-dependent formaldehyde dehydrogenase; Short=FALDH; Short=FDH; Short=GSH-FDH; AltName: Full=S-(hydroxymethyl)glutathione dehydrogenase gi|47847883|dbj|BAD21676.1| alcohol dehydrogenase class III [Oryza sativa Japonica Group] gi|47848172|dbj|BAD21999.1| alcohol dehydrogenase class III [Oryza sativa Japonica Group] gi|113538034|dbj|BAF10417.1| Os02g0815500 [Oryza sativa Japonica Group] gi|125584136|gb|EAZ25067.1| hypothetical protein OsJ_08860 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/290 (92%), Positives = 279/290 (96%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST+GQVITCKAAVAWE N+P+ IEDVQVAPPQAGEVR+KILFTALCHTD YTWSGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEG 63
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 293
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|1675394|gb|AAB19117.1| class III ADH enzyme [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 269/290 (92%), Positives = 278/290 (95%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST+GQVITCKAAVAWE NKP+ IEDVQVAPPQAGEVR+KILFTA CHTD YTWSGKDPEG
Sbjct: 4 STQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTAFCHTDHYTWSGKDPEG 63
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR ATG
Sbjct: 64 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATG 123
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI+PQAPLDKVCLLGCGV T
Sbjct: 124 VGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVST 183
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
GLGAVWNTAKVE GSIVA+FGLGTVGLAVAEGAK+AGASR+IGIDID KKFD AKNFGVT
Sbjct: 184 GLGAVWNTAKVEAGSIVAIFGLGTVGLAVAEGAKSAGASRIIGIDIDSKKFDVAKNFGVT 243
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
EFVNPKDHDKPIQQV+VDLTDGGVDYSFECIGNVSVMR+ALECCHK GT
Sbjct: 244 EFVNPKDHDKPIQQVIVDLTDGGVDYSFECIGNVSVMRSALECCHKGWGT 293
|
Source: Oryza sativa Indica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 291 | ||||||
| ZFIN|ZDB-GENE-011003-1 | 376 | adh5 "alcohol dehydrogenase 5" | 0.996 | 0.771 | 0.670 | 3.2e-104 | |
| UNIPROTKB|F1NI89 | 370 | ADH5 "Uncharacterized protein" | 0.962 | 0.756 | 0.679 | 2.7e-100 | |
| UNIPROTKB|F1NKS5 | 374 | ADH5 "Uncharacterized protein" | 0.962 | 0.748 | 0.679 | 2.7e-100 | |
| UNIPROTKB|F1NKS6 | 362 | ADH5 "Uncharacterized protein" | 0.962 | 0.773 | 0.679 | 2.7e-100 | |
| UNIPROTKB|F1PLM5 | 376 | F1PLM5 "Uncharacterized protei | 0.965 | 0.747 | 0.677 | 2.7e-100 | |
| UNIPROTKB|J9PA83 | 374 | ADH5 "Uncharacterized protein" | 0.965 | 0.751 | 0.677 | 2.7e-100 | |
| UNIPROTKB|P11766 | 374 | ADH5 "Alcohol dehydrogenase cl | 0.965 | 0.751 | 0.670 | 4.4e-100 | |
| UNIPROTKB|F1S0C1 | 374 | ADH5 "Uncharacterized protein" | 0.965 | 0.751 | 0.677 | 7.1e-100 | |
| DICTYBASE|DDB_G0281865 | 379 | adh5 "alcohol dehydrogenase, c | 0.982 | 0.754 | 0.658 | 9.1e-100 | |
| TIGR_CMR|SO_A0161 | 376 | SO_A0161 "zinc-containing alco | 0.965 | 0.747 | 0.641 | 1.2e-99 |
| ZFIN|ZDB-GENE-011003-1 adh5 "alcohol dehydrogenase 5" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1032 (368.3 bits), Expect = 3.2e-104, P = 3.2e-104
Identities = 195/291 (67%), Positives = 224/291 (76%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M T G+VI CKAAVAWE KPL IE+V+VAPP+A EVR+KI T +CHTDAYT SG DPE
Sbjct: 1 MDTTGKVIKCKAAVAWEAGKPLTIEEVEVAPPKAHEVRVKIHATGVCHTDAYTLSGSDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
GLFP ILGHE AG VESVGEGVT+ +PGD VIP Y +C ECKFCK+ KTNLC K+R
Sbjct: 61 GLFPVILGHEGAGTVESVGEGVTKFKPGDTVIPLYVPQCGECKFCKNPKTNLCQKIRVTQ 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G G +M D SRF+ GK ++HFMGTSTFS+YTVV ++S+AK+D APLDKVCLLGCG+
Sbjct: 121 GQG-LMPDNTSRFTCKGKQLFHFMGTSTFSEYTVVAEISLAKVDEHAPLDKVCLLGCGIS 179
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
TG GA NTAKVE GS AVFGLG V +R+IGID++P KF+ AK FG
Sbjct: 180 TGYGAAINTAKVEAGSTCAVFGLGAVGLAVVMGCKSAGATRIIGIDVNPDKFEIAKKFGA 239
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TEFVNPKDH KPIQ+VLV+LTDGGVDYSFECIGNV +MRAALE CHK GT
Sbjct: 240 TEFVNPKDHSKPIQEVLVELTDGGVDYSFECIGNVGIMRAALEACHKGWGT 290
|
|
| UNIPROTKB|F1NI89 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 191/281 (67%), Positives = 217/281 (77%)
Query: 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
VI CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP I
Sbjct: 1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LGHE AGIVESVGEGVT+V+PGD VIP Y +C ECK+CK+ KTNLC K+R G G +M
Sbjct: 61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKG-LM 119
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
D RF+ GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA
Sbjct: 120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179
Query: 187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
NTAKVEPGS AVFGLG V SR+IGIDI+ + +AK FG E ++P
Sbjct: 180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+D +KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHK 280
|
|
| UNIPROTKB|F1NKS5 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 191/281 (67%), Positives = 217/281 (77%)
Query: 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
VI CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP I
Sbjct: 5 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 64
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LGHE AGIVESVGEGVT+V+PGD VIP Y +C ECK+CK+ KTNLC K+R G G +M
Sbjct: 65 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRVTQGKG-LM 123
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
D RF+ GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA
Sbjct: 124 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 183
Query: 187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
NTAKVEPGS AVFGLG V SR+IGIDI+ + +AK FG E ++P
Sbjct: 184 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 243
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+D +KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 244 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHK 284
|
|
| UNIPROTKB|F1NKS6 ADH5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 191/281 (67%), Positives = 217/281 (77%)
Query: 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
VI CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TALCHTDAYT SG DPEG FP I
Sbjct: 1 VIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIVATALCHTDAYTLSGADPEGCFPVI 60
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LGHE AGIVESVGEGVT+V+PGD VIP Y +C ECK+CK+ KTNLC K+R G G +M
Sbjct: 61 LGHEGAGIVESVGEGVTKVKPGDTVIPLYIPQCGECKYCKNPKTNLCQKIRFTQGKG-LM 119
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
D RF+ GK IYHFMGTSTFS+YTVV D+SVAKIDP AP DKVCLLGCG+ TG GA
Sbjct: 120 PDGTIRFTCKGKQIYHFMGTSTFSEYTVVADISVAKIDPAAPFDKVCLLGCGISTGYGAA 179
Query: 187 WNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVNP 246
NTAKVEPGS AVFGLG V SR+IGIDI+ + +AK FG E ++P
Sbjct: 180 VNTAKVEPGSTCAVFGLGGVGLATVMGCKAAGASRIIGIDINKNTYAKAKEFGAAECISP 239
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+D +KPIQ+VLV++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 240 QDFEKPIQEVLVEMTDGGVDYSFECIGNVGVMRAALEACHK 280
|
|
| UNIPROTKB|F1PLM5 F1PLM5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 191/282 (67%), Positives = 218/282 (77%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
QVI CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 6 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 65
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +
Sbjct: 66 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 124
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 125 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 184
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
NTAKVEPGS AVFGLG V SR+IG+DI+ KF RAK FG +E +N
Sbjct: 185 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 244
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 245 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 286
|
|
| UNIPROTKB|J9PA83 ADH5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 995 (355.3 bits), Expect = 2.7e-100, P = 2.7e-100
Identities = 191/282 (67%), Positives = 218/282 (77%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
QVI CKAAVAWE KPL IE+V+VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 4 QVIKCKAAVAWEAGKPLSIEEVEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
NTAKVEPGS AVFGLG V SR+IG+DI+ KF RAK FG +E +N
Sbjct: 183 ALNTAKVEPGSTCAVFGLGGVGLATIMGCKVAGASRIIGVDINKDKFSRAKEFGASECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 284
|
|
| UNIPROTKB|P11766 ADH5 "Alcohol dehydrogenase class-3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 993 (354.6 bits), Expect = 4.4e-100, P = 4.4e-100
Identities = 189/282 (67%), Positives = 219/282 (77%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
+VI CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 4 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPV 63
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
NTAK+EPGS+ AVFGLG V SR+IG+DI+ KF RAK FG TE +N
Sbjct: 183 AVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 284
|
|
| UNIPROTKB|F1S0C1 ADH5 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 991 (353.9 bits), Expect = 7.1e-100, P = 7.1e-100
Identities = 191/282 (67%), Positives = 218/282 (77%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
QVI CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 4 QVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGSFPV 63
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G +
Sbjct: 64 ILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCGV TG GA
Sbjct: 123 MPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGVSTGYGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
NTAKVEPGS AVFGLG V SR+IG+DI+ KF RAK FG +E +N
Sbjct: 183 AVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGASECIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHK
Sbjct: 243 PQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 284
|
|
| DICTYBASE|DDB_G0281865 adh5 "alcohol dehydrogenase, class 3" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 191/290 (65%), Positives = 215/290 (74%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
MSTEG+VITCKAAVAWE KPLVIED++V PPQ GEVRIKIL+T +CHTD+YT SG DPE
Sbjct: 1 MSTEGKVITCKAAVAWEAKKPLVIEDIEVQPPQKGEVRIKILYTGVCHTDSYTLSGSDPE 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
G+FPCILGHE GIVES+GEGVT V+ GDHVIP Y EC CKFC S KTNLC K+R
Sbjct: 61 GIFPCILGHEGGGIVESIGEGVTSVKVGDHVIPLYIPECGTCKFCTSNKTNLCSKIRITQ 120
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G G M D +RF GK I+HFMGTSTFSQYTV+ ++S + APLDKVCLLGCG+
Sbjct: 121 GKG-QMPDGTTRFKCKGKEIFHFMGTSTFSQYTVLPEISCCVVREDAPLDKVCLLGCGIT 179
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGV 240
TG GA TAKVE GS VA+FGLG V R+IGID + KF K+FG
Sbjct: 180 TGFGAAKITAKVEEGSTVAIFGLGAVGLSVAQGAVDCGAKRIIGIDNNETKFGPGKDFGC 239
Query: 241 TEFVNP-KD--HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
TEF+NP KD K IQQ LVD+TDGGVDYSFECIGNV+VMRAALECCHK
Sbjct: 240 TEFINPSKDLPEGKTIQQHLVDITDGGVDYSFECIGNVNVMRAALECCHK 289
|
|
| TIGR_CMR|SO_A0161 SO_A0161 "zinc-containing alcohol dehydrogenase" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 989 (353.2 bits), Expect = 1.2e-99, P = 1.2e-99
Identities = 181/282 (64%), Positives = 220/282 (78%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
Q++ KAAVAW +PL IE V V PPQ GEVR+K++ T +CHTDA+T SG DPEG+FPC
Sbjct: 4 QILKSKAAVAWAVGEPLSIEIVDVMPPQKGEVRVKMIATGVCHTDAFTLSGDDPEGIFPC 63
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
ILGHE GIVES+GEGVT VQ GDHVIP Y EC ECKFCKSGKTNLC K+R G G +
Sbjct: 64 ILGHEGGGIVESIGEGVTSVQVGDHVIPLYTPECGECKFCKSGKTNLCQKIRETQGKG-L 122
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
M D SRFS +G+ IYH+MGTSTFS+YTV+ ++S+AK++P APL++VCLLGCGV TG+GA
Sbjct: 123 MPDGTSRFSKDGQIIYHYMGTSTFSEYTVLPEISLAKVNPDAPLEEVCLLGCGVTTGMGA 182
Query: 186 VWNTAKVEPGSIVAVFGLGTVXXXXXXXXXXXXXSRVIGIDIDPKKFDRAKNFGVTEFVN 245
V NTAKVE G+ VA+FG+G + SR+I IDI+ KF+ A G T+F+N
Sbjct: 183 VMNTAKVEEGATVAIFGMGGIGLSAVIGATMAKASRIIVIDINESKFELAGKLGATDFIN 242
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
PKD+DKPIQ V+V+LTDGGVDYSFECIGNV+VMR+ALECCHK
Sbjct: 243 PKDYDKPIQDVIVELTDGGVDYSFECIGNVNVMRSALECCHK 284
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q96533 | ADHX_ARATH | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9175 | 1.0 | 0.7678 | yes | no |
| P19854 | ADHX_HORSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6950 | 0.9656 | 0.7513 | yes | no |
| A2XAZ3 | ADHX_ORYSI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9310 | 0.9965 | 0.7611 | N/A | no |
| B1J085 | FRMA_ECOLC | 1, ., 1, ., 1, ., - | 0.625 | 0.9587 | 0.7560 | yes | no |
| P12711 | ADHX_RAT | 1, ., 1, ., 1, ., 2, 8, 4 | 0.7056 | 0.9656 | 0.7513 | yes | no |
| P93629 | ADHX_MAIZE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9273 | 0.9931 | 0.7585 | N/A | no |
| A7ZX04 | FRMA_ECOHS | 1, ., 1, ., 1, ., - | 0.625 | 0.9587 | 0.7560 | yes | no |
| Q0DWH1 | ADHX_ORYSJ | 1, ., 1, ., 1, ., 2, 8, 4 | 0.9275 | 0.9965 | 0.7611 | yes | no |
| P80572 | ADHX_PEA | 1, ., 1, ., 1, ., 2, 8, 4 | 0.8793 | 0.9965 | 0.7671 | N/A | no |
| O19053 | ADHX_RABIT | 1, ., 1, ., 1, ., 2, 8, 4 | 0.7056 | 0.9656 | 0.7513 | yes | no |
| Q17335 | ADHX_CAEEL | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6310 | 0.9793 | 0.7421 | yes | no |
| Q3ZC42 | ADHX_BOVIN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6985 | 0.9656 | 0.7513 | yes | no |
| P46415 | ADHX_DROME | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6712 | 0.9931 | 0.7625 | yes | no |
| P11766 | ADHX_HUMAN | 1, ., 1, ., 1, ., 2, 8, 4 | 0.7021 | 0.9656 | 0.7513 | yes | no |
| P79896 | ADHX_SPAAU | 1, ., 1, ., 1, ., 2, 8, 4 | 0.7003 | 0.9828 | 0.7606 | N/A | no |
| P32771 | FADH_YEAST | 1, ., 1, ., 1, ., - | 0.6020 | 0.9828 | 0.7409 | yes | no |
| O74540 | FADH2_SCHPO | 1, ., 1, ., 1, ., - | 0.6245 | 0.9759 | 0.7473 | yes | no |
| P28474 | ADHX_MOUSE | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6985 | 0.9656 | 0.7513 | yes | no |
| Q54TC2 | ADHX_DICDI | 1, ., 1, ., 1, ., 2, 8, 4 | 0.6862 | 0.9828 | 0.7546 | yes | no |
| Q3Z550 | FRMA_SHISS | 1, ., 1, ., 1, ., - | 0.625 | 0.9587 | 0.7560 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.1.1 | 0.983 |
| 4th Layer | 1.1.1.284 | 0.979 |
| 4th Layer | 1.1.1.1 | 0.979 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 291 | |||
| cd08300 | 368 | cd08300, alcohol_DH_class_III, class III alcohol d | 0.0 | |
| cd08301 | 369 | cd08301, alcohol_DH_plants, Plant alcohol dehydrog | 0.0 | |
| cd08277 | 365 | cd08277, liver_alcohol_DH_like, Liver alcohol dehy | 1e-162 | |
| TIGR02818 | 368 | TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat | 1e-159 | |
| cd08299 | 373 | cd08299, alcohol_DH_class_I_II_IV, class I, II, IV | 1e-154 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 1e-152 | |
| PLN02740 | 381 | PLN02740, PLN02740, Alcohol dehydrogenase-like | 1e-142 | |
| cd05279 | 365 | cd05279, Zn_ADH1, Liver alcohol dehydrogenase and | 1e-137 | |
| PLN02827 | 378 | PLN02827, PLN02827, Alcohol dehydrogenase-like | 1e-125 | |
| cd08279 | 363 | cd08279, Zn_ADH_class_III, Class III alcohol dehyd | 1e-113 | |
| cd08278 | 365 | cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro | 2e-87 | |
| cd08281 | 371 | cd08281, liver_ADH_like1, Zinc-dependent alcohol d | 1e-83 | |
| TIGR03989 | 369 | TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa | 1e-76 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 2e-61 | |
| TIGR03451 | 358 | TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi | 4e-59 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 2e-56 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 1e-55 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 7e-50 | |
| cd08260 | 345 | cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD | 8e-50 | |
| cd08231 | 361 | cd08231, MDR_TM0436_like, Hypothetical enzyme TM04 | 1e-46 | |
| cd08233 | 351 | cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio | 7e-44 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 9e-44 | |
| cd05278 | 347 | cd05278, FDH_like, Formaldehyde dehydrogenases | 1e-43 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 7e-43 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 2e-42 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 3e-42 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 5e-42 | |
| cd08235 | 343 | cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas | 7e-42 | |
| cd05285 | 343 | cd05285, sorbitol_DH, Sorbitol dehydrogenase | 9e-42 | |
| cd08239 | 339 | cd08239, THR_DH_like, L-threonine dehydrogenase (T | 5e-39 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 9e-37 | |
| cd08283 | 386 | cd08283, FDH_like_1, Glutathione-dependent formald | 3e-36 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 3e-36 | |
| cd08285 | 351 | cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd | 2e-35 | |
| cd05284 | 340 | cd05284, arabinose_DH_like, D-arabinose dehydrogen | 6e-34 | |
| cd08286 | 345 | cd08286, FDH_like_ADH2, formaldehyde dehydrogenase | 2e-33 | |
| cd05281 | 341 | cd05281, TDH, Threonine dehydrogenase | 3e-33 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 4e-33 | |
| cd05283 | 337 | cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA | 4e-32 | |
| cd08284 | 344 | cd08284, FDH_like_2, Glutathione-dependent formald | 6e-32 | |
| cd08240 | 350 | cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa | 7e-32 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 3e-30 | |
| cd08258 | 306 | cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD | 2e-29 | |
| cd08282 | 375 | cd08282, PFDH_like, Pseudomonas putida aldehyde-di | 7e-28 | |
| cd08298 | 329 | cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA | 2e-26 | |
| pfam08240 | 108 | pfam08240, ADH_N, Alcohol dehydrogenase GroES-like | 2e-26 | |
| cd08232 | 339 | cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | 6e-26 | |
| cd08287 | 345 | cd08287, FDH_like_ADH3, formaldehyde dehydrogenase | 1e-25 | |
| PRK05396 | 341 | PRK05396, tdh, L-threonine 3-dehydrogenase; Valida | 1e-25 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 5e-25 | |
| TIGR00692 | 340 | TIGR00692, tdh, L-threonine 3-dehydrogenase | 8e-24 | |
| cd08296 | 333 | cd08296, CAD_like, Cinnamyl alcohol dehydrogenases | 9e-24 | |
| PRK09422 | 338 | PRK09422, PRK09422, ethanol-active dehydrogenase/a | 3e-23 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 2e-22 | |
| PRK10309 | 347 | PRK10309, PRK10309, galactitol-1-phosphate dehydro | 4e-22 | |
| cd08269 | 312 | cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD | 2e-21 | |
| cd08265 | 384 | cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD | 3e-21 | |
| TIGR03201 | 349 | TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1 | 6e-21 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 2e-20 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 5e-20 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 3e-19 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 5e-19 | |
| PLN02702 | 364 | PLN02702, PLN02702, L-idonate 5-dehydrogenase | 2e-18 | |
| TIGR02819 | 393 | TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas | 3e-18 | |
| PRK10083 | 339 | PRK10083, PRK10083, putative oxidoreductase; Provi | 5e-18 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 3e-17 | |
| cd08256 | 350 | cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD | 5e-17 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 1e-16 | |
| cd08262 | 341 | cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD | 2e-15 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 5e-15 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 5e-15 | |
| PLN02586 | 360 | PLN02586, PLN02586, probable cinnamyl alcohol dehy | 3e-14 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 3e-14 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 6e-14 | |
| TIGR03366 | 280 | TIGR03366, HpnZ_proposed, putative phosphonate cat | 1e-13 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 4e-12 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 8e-12 | |
| PRK09880 | 343 | PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro | 9e-12 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 1e-11 | |
| cd08242 | 319 | cd08242, MDR_like, Medium chain dehydrogenases/red | 2e-11 | |
| cd08230 | 355 | cd08230, glucose_DH, Glucose dehydrogenase | 3e-11 | |
| PLN02514 | 357 | PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | 4e-11 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 2e-10 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 7e-10 | |
| cd08292 | 324 | cd08292, ETR_like_2, 2-enoyl thioester reductase ( | 1e-09 | |
| PLN02178 | 375 | PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | 3e-09 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 3e-08 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 8e-08 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 1e-07 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 1e-07 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 2e-07 | |
| cd08252 | 336 | cd08252, AL_MDR, Arginate lyase and other MDR fami | 4e-07 | |
| TIGR02822 | 329 | TIGR02822, adh_fam_2, zinc-binding alcohol dehydro | 7e-07 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 8e-07 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 2e-06 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 2e-06 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 4e-06 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 5e-06 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 1e-05 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 3e-05 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 6e-05 | |
| TIGR02817 | 336 | TIGR02817, adh_fam_1, zinc-binding alcohol dehydro | 8e-05 | |
| cd08247 | 352 | cd08247, AST1_like, AST1 is a cytoplasmic protein | 1e-04 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 3e-04 | |
| cd01075 | 200 | cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d | 6e-04 | |
| pfam02254 | 116 | pfam02254, TrkA_N, TrkA-N domain | 6e-04 | |
| TIGR03026 | 409 | TIGR03026, NDP-sugDHase, nucleotide sugar dehydrog | 8e-04 | |
| cd08291 | 324 | cd08291, ETR_like_1, 2-enoyl thioester reductase ( | 0.002 | |
| COG0677 | 436 | COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate de | 0.002 | |
| TIGR01202 | 308 | TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter | 0.002 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 0.003 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 0.004 | |
| pfam13578 | 105 | pfam13578, Methyltransf_24, Methyltransferase doma | 0.004 |
| >gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 591 bits (1525), Expect = 0.0
Identities = 223/284 (78%), Positives = 243/284 (85%), Gaps = 1/284 (0%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
ITCKAAVAWE KPL IE+V+VAPP+AGEVRIKIL T +CHTDAYT SG DPEGLFP IL
Sbjct: 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVIL 60
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHE AGIVESVGEGVT V+PGDHVIP Y EC ECKFCKSGKTNLC K+R G G +M
Sbjct: 61 GHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKG-LMP 119
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
D SRFS GKPIYHFMGTSTFS+YTVV ++SVAKI+P+APLDKVCLLGCGV TG GAV
Sbjct: 120 DGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVL 179
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
NTAKVEPGS VAVFGLG VGLAV +GAKAAGASR+IGIDI+P KF+ AK FG T+ VNPK
Sbjct: 180 NTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239
Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
DHDKPIQQVLV++TDGGVDY+FECIGNV VMRAALE CHK GT
Sbjct: 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGT 283
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368 |
| >gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 517 bits (1334), Expect = 0.0
Identities = 199/284 (70%), Positives = 233/284 (82%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
ITCKAAVAWE KPLVIE+V+VAPPQA EVRIKIL T+LCHTD Y W K LFP IL
Sbjct: 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRIL 60
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHEAAGIVESVGEGVT+++PGDHV+P + EC+EC+ CKS K+N+C +R T GVM+N
Sbjct: 61 GHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMIN 120
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
D KSRFSINGKPIYHF+GTSTFS+YTVVH VAKI+P+APLDKVCLL CGV TGLGA W
Sbjct: 121 DGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAW 180
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
N AKV+ GS VA+FGLG VGLAVAEGA+ GASR+IG+D++P KF++AK FGVTEFVNPK
Sbjct: 181 NVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240
Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
DHDKP+Q+V+ ++T GGVDYSFEC GN+ M +A EC H G
Sbjct: 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGV 284
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369 |
| >gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 454 bits (1169), Expect = e-162
Identities = 180/284 (63%), Positives = 212/284 (74%), Gaps = 3/284 (1%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
I CKAAVAWE KPLVIE+++VAPP+A EVRIK+L T++CHTD G LFP IL
Sbjct: 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGF-KATLFPVIL 59
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHE AGIVESVGEGVT ++PGD VIP + +C EC C+SGKTNLC K R A +G +M
Sbjct: 60 GHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYR-ANESG-LMP 117
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
D SRF+ GK IYHF+GTSTFSQYTVV + VAKIDP APL+ VCLLGCG TG GA W
Sbjct: 118 DGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAW 177
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
NTAKVEPGS VAVFGLG VGL+ GAK AGASR+IG+DI+ KF++AK FG T+F+NPK
Sbjct: 178 NTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237
Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
D DKP+ +V+ ++T GGVDYSFEC GN +M ALE G
Sbjct: 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGV 281
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 447 bits (1151), Expect = e-159
Identities = 188/277 (67%), Positives = 225/277 (81%), Gaps = 1/277 (0%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
+AAVAW +PL IE+V V PQ GEV ++I+ T +CHTDA+T SG DPEG+FP ILGHE
Sbjct: 3 RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHE 62
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
AGIVE+VGEGVT V+ GDHVIP Y AEC ECKFC SGKTNLC VR G G+M D
Sbjct: 63 GAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGT 121
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
SRFS +G+PIYH+MG STFS+YTVV ++S+AKI+P APL++VCLLGCGV TG+GAV NTA
Sbjct: 122 SRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTA 181
Query: 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250
KVE G VAVFGLG +GL+V +GA+ A ASR+I IDI+P KF+ AK G T+ VNP D+D
Sbjct: 182 KVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD 241
Query: 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
KPIQ+V+V++TDGGVDYSFECIGNV+VMRAALECCHK
Sbjct: 242 KPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHK 278
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368 |
| >gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 435 bits (1121), Expect = e-154
Identities = 170/289 (58%), Positives = 212/289 (73%), Gaps = 2/289 (0%)
Query: 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
T G+VI CKAAV WEP KP IE+++VAPP+A EVRIKI+ T +C +D + SGK
Sbjct: 1 TAGKVIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TP 59
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
FP ILGHEAAGIVESVGEGVT V+PGD VIP + +C +C+ C + ++NLC K
Sbjct: 60 FPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQ 119
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
G+M D SRF+ GKPI+HF+GTSTFS+YTVV +++VAKID APL+KVCL+GCG TG
Sbjct: 120 GLMQ-DGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTG 178
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
GA NTAKV PGS AVFGLG VGL+ G KAAGASR+I +DI+ KF +AK G TE
Sbjct: 179 YGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATE 238
Query: 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
+NP+D+ KPIQ+VL ++TDGGVD+SFE IG + M+AAL CH+ G
Sbjct: 239 CINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGV 287
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 430 bits (1108), Expect = e-152
Identities = 173/280 (61%), Positives = 213/280 (76%), Gaps = 3/280 (1%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ +AAVA E KPL IE+V + PP+AGEV ++I T +CHTDA+T SG DPEG FP +L
Sbjct: 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVL 59
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHE AGIVE+VGEGVT V+PGDHVI + EC +CKFC SGK NLC +R G G M
Sbjct: 60 GHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMP- 118
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
D +R S NG P+YH++G STF++YTVVH++S+ KIDP APL+K CLLGCGV TG+GAV
Sbjct: 119 DGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVV 178
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
NTAKVEPG VAVFGLG VGLA +GAKAAGA R+I +DI+P+K + AK FG T FVNPK
Sbjct: 179 NTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238
Query: 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+ D + + +V+LTDGG DY+FEC+GNV VMR ALE H+
Sbjct: 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHR 277
|
Length = 366 |
| >gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 405 bits (1043), Expect = e-142
Identities = 170/289 (58%), Positives = 220/289 (76%), Gaps = 3/289 (1%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DP 59
T+G+VITCKAAVAW P +PLV+E+++V PPQ EVRIKIL+T++CHTD W G+ +
Sbjct: 2 SETQGKVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEA 61
Query: 60 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
+ +P ILGHEAAGIVESVGEGV +++ GDHVIP + EC +C++CK KTNLC R
Sbjct: 62 QRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVD 121
Query: 120 TGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177
VM+ND K+RFS +G+PIYHF+ TSTF++YTV+ V KIDP APL K+ LL C
Sbjct: 122 PFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSC 181
Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
GV TG+GA WNTA V+ GS VA+FGLG VGLAVAEGA+A GAS++IG+DI+P+KF++ K
Sbjct: 182 GVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKE 241
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
G+T+F+NPKD DKP+ + + ++T GGVDYSFEC GNV V+R A H
Sbjct: 242 MGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTH 290
|
Length = 381 |
| >gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 391 bits (1006), Expect = e-137
Identities = 165/282 (58%), Positives = 208/282 (73%), Gaps = 2/282 (0%)
Query: 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
CKAAV WE KPL IE+++VAPP+AGEVRIK++ T +CHTD + GK P P ILGH
Sbjct: 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGH 59
Query: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
E AGIVES+G GVT ++PGD VIP + +C +CK C + + NLC K RG G G+M D
Sbjct: 60 EGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMS-DG 118
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
SRF+ GKPI+HF+GTSTF++YTVV ++S+AKIDP APL+KVCL+GCG TG GA NT
Sbjct: 119 TSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNT 178
Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
AKV PGS AVFGLG VGL+V G KAAGASR+I +DI+ KF++AK G TE +NP+D
Sbjct: 179 AKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238
Query: 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
DKPI +VL ++TDGGVDY+FE IG+ ++ AL+ GT
Sbjct: 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGT 280
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365 |
| >gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Score = 361 bits (929), Expect = e-125
Identities = 156/280 (55%), Positives = 205/280 (73%), Gaps = 4/280 (1%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
VITC+AAVAW + LV+E+V+V+PPQ E+RIK++ T+LC +D W + LFP
Sbjct: 9 NVITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPR 65
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
I GHEA+GIVES+GEGVTE + GDHV+ + EC C+ C SGK+N+C +V G GVM
Sbjct: 66 IFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMC-QVLGLERKGVM 124
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
+D+K+RFSI GKP+YH+ S+FS+YTVVH K+DP APL K+CLL CGV GLGA
Sbjct: 125 HSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGA 184
Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
WN A V GS V +FGLGTVGL+VA+GAK GAS++IG+DI+P+K ++AK FGVT+F+N
Sbjct: 185 AWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFIN 244
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 285
P D +PIQQV+ +T GG DYSFEC+G+ + AL+ C
Sbjct: 245 PNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSC 284
|
Length = 378 |
| >gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 331 bits (851), Expect = e-113
Identities = 130/274 (47%), Positives = 172/274 (62%), Gaps = 6/274 (2%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
+AAV E KPL IE+V++ P GEV ++I LCH+D + +G P L P +LGHE
Sbjct: 2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPAPL-PAVLGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
AG+VE VG GVT V+PGDHV+ + C C++C G+ NLC GA G + D
Sbjct: 61 GAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCD--LGAGILGGQLPDGT 118
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
RF+ +G+P+ G TF++YTVV + SV KID PLD+ LLGCGV TG+GAV NTA
Sbjct: 119 RRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTA 178
Query: 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250
+V PG VAV G G VGL +GA+ AGASR+I +D P+K + A+ FG T VN + D
Sbjct: 179 RVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDD 238
Query: 251 KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283
++ V DLTDG G DY+FE +G + +R AL
Sbjct: 239 -AVEAV-RDLTDGRGADYAFEAVGRAATIRQALA 270
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363 |
| >gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 265 bits (679), Expect = 2e-87
Identities = 111/278 (39%), Positives = 158/278 (56%), Gaps = 5/278 (1%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ AAV EP P V+EDV++ P+ EV ++I+ T +CHTD G P P +L
Sbjct: 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVL 59
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHE AG+VE+VG VT ++PGDHV+ + A C EC C SG C +G +
Sbjct: 60 GHEGAGVVEAVGSAVTGLKPGDHVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPD 118
Query: 128 DRKSRFSINGKPIY-HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+G P++ HF G S+F+ Y VVH+ +V K+D PL+ + LGCG+ TG GAV
Sbjct: 119 GSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAV 178
Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
N K PGS +AVFG G VGLA AK AG + +I +DI + + AK G T +NP
Sbjct: 179 LNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINP 238
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
K+ D + + ++T GGVDY+ + G +V+ A++
Sbjct: 239 KEED--LVAAIREITGGGVDYALDTTGVPAVIEQAVDA 274
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365 |
| >gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Score = 255 bits (653), Expect = 1e-83
Identities = 121/265 (45%), Positives = 160/265 (60%), Gaps = 4/265 (1%)
Query: 20 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG 79
+PLVIE+V++ PP GEV +KI LCH+D +G P L P LGHEAAG+V VG
Sbjct: 19 RPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPRPL-PMALGHEAAGVVVEVG 77
Query: 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139
EGVT+++ GDHV+ + C C+ C G+ LC A GAG +++ + R + G
Sbjct: 78 EGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGR-RLRLRGGE 136
Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVA 199
I H +G S F++Y VV SV KID PL+ L GC V TG+GAV NTA V PG VA
Sbjct: 137 INHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVA 196
Query: 200 VFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259
V GLG VGL+ GA AAGAS+V+ +D++ K A+ G T VN D + ++QV +
Sbjct: 197 VVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPN-AVEQV-RE 254
Query: 260 LTDGGVDYSFECIGNVSVMRAALEC 284
LT GGVDY+FE G+V + A E
Sbjct: 255 LTGGGVDYAFEMAGSVPALETAYEI 279
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371 |
| >gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family | Back alignment and domain information |
|---|
Score = 237 bits (607), Expect = 1e-76
Identities = 107/254 (42%), Positives = 151/254 (59%), Gaps = 6/254 (2%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KAAV W P +P +E++++ P+AGEV +K++ + LCH+D + +G P +P + GHE
Sbjct: 3 KAAVLWGPGQPWEVEEIELDDPKAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHE 62
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG-AGVMMNDR 129
AG+V VG GVT V+PGDHV+ + C C++C +G NLC GA G ++D
Sbjct: 63 GAGVVTKVGPGVTGVKPGDHVVLSFIPACGRCRWCSTGLQNLCD--LGAALLTGSQISDG 120
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
RF +G+ + TFS+YTVV + SV KID PLDK CL+GCGVPTG G+ N
Sbjct: 121 TYRFHADGQDVGQMCLLGTFSEYTVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNI 180
Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
A V PG V V G+G VG+ +GA AGA +VI +D K ++A FG T
Sbjct: 181 ADVRPGDTVVVMGIGGVGINAVQGAAVAGARKVIAVDPVEFKREQALKFGATHAFA--SM 238
Query: 250 DKPIQQVLVDLTDG 263
++ +Q V +LT+G
Sbjct: 239 EEAVQLVR-ELTNG 251
|
This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 198 bits (505), Expect = 2e-61
Identities = 91/277 (32%), Positives = 137/277 (49%), Gaps = 7/277 (2%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KAAV PN PL IE++ V P+ GE+ I++ +CH+D + G+ P P +LGHE
Sbjct: 2 KAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHE 60
Query: 71 AAGIVESVGEGVT---EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
+G V VG V + GD V+ + C +C++C GK NLC +
Sbjct: 61 ISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLY 120
Query: 128 DRKSR-FSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
D +R F ++G P+Y + ++Y VV ++A + + +LGC T GA+
Sbjct: 121 DGTTRLFRLDGGPVYMYSM-GGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGAL 179
Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
+ A V PG VAV G+G VG + + AKA GAS +I +D+ +K +AK G T VN
Sbjct: 180 KHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
D + + GVD E +G + AL+
Sbjct: 240 AKED-AVAAIREITGGRGVDVVVEALGKPETFKLALD 275
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase | Back alignment and domain information |
|---|
Score = 192 bits (489), Expect = 4e-59
Identities = 106/275 (38%), Positives = 146/275 (53%), Gaps = 15/275 (5%)
Query: 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD-AYTWSGKDPEGLFPCIL 67
T + +A P+ +E + V P GEV + I +CHTD Y G + E FP +L
Sbjct: 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGINDE--FPFLL 58
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHEAAG+VE+VGEGVT+V PGD+V+ ++A C +C+ CK G+ C AT + +
Sbjct: 59 GHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTD 118
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
G + +G F++ T+VH K+DP A LLGCGV GLGA
Sbjct: 119 ---------GTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAV 169
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
NT V+ G VAV G G VG A GA AGAS++I +DID +K + A+ FG T VN
Sbjct: 170 NTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSS 229
Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 281
D P++ + LT G G D + +G + A
Sbjct: 230 GTD-PVEAIR-ALTGGFGADVVIDAVGRPETYKQA 262
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 2e-56
Identities = 87/271 (32%), Positives = 121/271 (44%), Gaps = 31/271 (11%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+T KAAV + +PL IE+V V P GEV IK+ +CHTD + G P P I
Sbjct: 2 MTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIP 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE G V VGEGVT ++ GD V + C EC++C+SG NLC +
Sbjct: 62 GHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITG------ 115
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
++ +G +++Y VV V KI L + L C T A+
Sbjct: 116 ------YTTDG----------GYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL 159
Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
A V+PG VAV G G +G + AKA GA VI I +K + AK G +N
Sbjct: 160 -KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVINS 217
Query: 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277
D ++ V D + +G ++
Sbjct: 218 SD-SDALEAV-----KEIADAIIDTVGPATL 242
|
Length = 339 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 180 bits (459), Expect = 1e-55
Identities = 72/253 (28%), Positives = 102/253 (40%), Gaps = 30/253 (11%)
Query: 36 EVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 94
EV +++ LC TD + G P P ILGHE AG+V VG GVT V+ GD V+
Sbjct: 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60
Query: 95 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
C C+ C+ I F++Y V
Sbjct: 61 PNLGCGTCELCRELCPGGG--------------------------ILGEGLDGGFAEYVV 94
Query: 155 VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGA 214
V ++ + L++ LL + T A+ ++PG V V G G VGL A+ A
Sbjct: 95 VPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLA 154
Query: 215 KAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274
KAAGA RVI D +K + AK G ++ K+ D + L GG D + +G
Sbjct: 155 KAAGA-RVIVTDRSDEKLELAKELGADHVIDYKEEDLE--EELRLTGGGGADVVIDAVGG 211
Query: 275 VSVMRAALECCHK 287
+ AL
Sbjct: 212 PETLAQALRLLRP 224
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 7e-50
Identities = 76/278 (27%), Positives = 113/278 (40%), Gaps = 19/278 (6%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP-CILGH 69
KAAV + + +E+ P G+V I++ T +C +D + + G +P ILGH
Sbjct: 2 KAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGH 61
Query: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
E G V VG V + GD V+ C C++C++G+ NLC AG+
Sbjct: 62 EFVGEVVEVGV-VRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGG-- 118
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
I+G F++Y V P ++ L + T
Sbjct: 119 -----IDG----------GFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163
Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
A V PG V V G G +GL AK GAS VI +D P++ + AK G + V
Sbjct: 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE 223
Query: 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
D ++L G D E +G+ + ALE
Sbjct: 224 DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRP 261
|
Length = 350 |
| >gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 167 bits (426), Expect = 8e-50
Identities = 84/279 (30%), Positives = 125/279 (44%), Gaps = 26/279 (9%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
+AAV E +PL I +V P V +++ +C +D + W G DP+ P + GHE
Sbjct: 2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHE 61
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
AG+V VGE V+ + GD V + C C +C++G +N+C
Sbjct: 62 FAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV------------- 108
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
F +F++Y V DV++ ++ LGC T A+ +
Sbjct: 109 ---------QPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH 159
Query: 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248
A+V+PG VAV G G VGL+ A A GA RVI +DID K + A+ G VN +
Sbjct: 160 QARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNASE 218
Query: 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+ V DLT GG S + +G R ++ K
Sbjct: 219 VEDVAAAV-RDLTGGGAHVSVDALGIPETCRNSVASLRK 256
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345 |
| >gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Score = 159 bits (405), Expect = 1e-46
Identities = 77/284 (27%), Positives = 122/284 (42%), Gaps = 26/284 (9%)
Query: 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
+AAV P KPL I +V + + G V +++ +C +D +T +G+ P P ILGH
Sbjct: 1 ARAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGH 60
Query: 70 EAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
E G V ++G GVT ++ GD V A C C C G C +
Sbjct: 61 EGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKK----- 115
Query: 124 VMMNDRKSRFSIN-GKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
+ H G ++++ + ++ ++ P + C + T
Sbjct: 116 ---------YGHEASCDDPHLSG--GYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALAT 164
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
L A+ V G V V G G +GL AK AGA RVI ID P++ + A+ FG
Sbjct: 165 VLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGAD 224
Query: 242 EFVNPKDHDKPIQQVLV-DLTDG-GVDYSFECIGNVSVMRAALE 283
++ + P ++ +V D+T G G D E G+ + + LE
Sbjct: 225 ATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLE 268
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361 |
| >gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Score = 152 bits (386), Expect = 7e-44
Identities = 84/292 (28%), Positives = 126/292 (43%), Gaps = 47/292 (16%)
Query: 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD--AYTWSG-----KDPEGL--- 62
A + K + +E+V P + GEV+IK+ + +C +D Y G +
Sbjct: 3 AARYHGRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYL-DGPIFIPTEGHPHLTG 61
Query: 63 --FPCILGHEAAGIVESVGEGVTEVQPGDHVI--PCYQAECRECKFCKSGKTNLCGKVRG 118
P LGHE +G+V VG GVT + GD V+ P + C C CK G NLC + G
Sbjct: 62 ETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIK--CGTCGACKRGLYNLCDSL-G 118
Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
G G G F++Y VV V K+ PL++ L+
Sbjct: 119 FIGLGGG----------GG----------GFAEYVVVPAYHVHKLPDNVPLEEAALVE-- 156
Query: 179 VPT--GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
P AV + +PG V G G +GL KAAGAS++I + + + A+
Sbjct: 157 -PLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAE 214
Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
G T ++P + D + + LT G GVD SF+C G + + A++
Sbjct: 215 ELGATIVLDPTEVD--VVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRP 264
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 151 bits (384), Expect = 9e-44
Identities = 85/266 (31%), Positives = 116/266 (43%), Gaps = 26/266 (9%)
Query: 20 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESV 78
LV+E+V V P GEV +K+ +CH+D + G P P LGHE AG V V
Sbjct: 12 GLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEV 71
Query: 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 138
G GVT + GD V C C C+ G+ NLC +N I+G
Sbjct: 72 GAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLC------------LNQGMPGLGIDG- 118
Query: 139 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198
F++Y VV ++ + P + + V T AV +V+PG V
Sbjct: 119 ---------GFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETV 169
Query: 199 AVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258
V GLG +GL + AKA GA VI +DI +K + AK G E +N D D P +
Sbjct: 170 LVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSLD-DSPKDKKAA 227
Query: 259 DLTDGGVDYSFECIGNVSVMRAALEC 284
L GG D F+ +G A +
Sbjct: 228 GL-GGGFDVIFDFVGTQPTFEDAQKA 252
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Score = 151 bits (383), Expect = 1e-43
Identities = 85/282 (30%), Positives = 125/282 (44%), Gaps = 31/282 (10%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA V P K + E + +++ T++C +D + + G P ILGHE
Sbjct: 2 KALVYLGPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHE 61
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
G V VG V ++PGD V C C+FC+ G C
Sbjct: 62 FVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCE---------------- 105
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVH----DVSVAKIDPQAPLDKVCLLGCGVPTGL-GA 185
NG + Q V D+++AKI P + +L +PTG GA
Sbjct: 106 -----NGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA 160
Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
A ++PGS VAV G G VGL GA+ GA+R+I +D +P++ D AK G T+ +N
Sbjct: 161 E--LAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIIN 218
Query: 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH 286
PK+ ++Q+L +LT G GVD E +G A++
Sbjct: 219 PKN-GDIVEQIL-ELTGGRGVDCVIEAVGFEETFEQAVKVVR 258
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 149 bits (378), Expect = 7e-43
Identities = 87/264 (32%), Positives = 120/264 (45%), Gaps = 31/264 (11%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KAA+ +PNKPL IE+V P GEV IK+ +C+ D W G P G +P ILGHE
Sbjct: 2 KAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHE 61
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
G VE VGEGV +PGD VI Y C +C++C SG+ NLC
Sbjct: 62 IVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA------------- 108
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
Y F++Y V + S+ K+ + L C V T + A+ A
Sbjct: 109 ---------EYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHAL-KRA 158
Query: 191 KVEPGSIVAV-FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
V+ G V V G VG+ + AKA GA RVI + P+K K G ++
Sbjct: 159 GVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSKF 217
Query: 250 DKPIQQVLVDLTDGGVDYSFECIG 273
+ ++++ GG D E +G
Sbjct: 218 SEDVKKL------GGADVVIELVG 235
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 148 bits (376), Expect = 2e-42
Identities = 90/277 (32%), Positives = 133/277 (48%), Gaps = 36/277 (12%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA V +P + L + D+ P AGEV +++ +C +D + + G++P +P ILGHE
Sbjct: 2 KALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHV--IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
+G V VGEGV ++ GD V P C EC C+ G+ N C ++ V+
Sbjct: 61 LSGEVVEVGEGVAGLKVGDRVVVDPYI--SCGECYACRKGRPNCCENLQ------VLGVH 112
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VW 187
R +G F++Y VV + LD+ L+ P +GA
Sbjct: 113 R------DG----------GFAEYIVV-PADALLVPEGLSLDQAALVE---PLAIGAHAV 152
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
A V G V V G G +GL V + AKA GA RVI +DID ++ + A+ G + +N
Sbjct: 153 RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVG 211
Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283
D D + L +LTDG G D + GN + M A+E
Sbjct: 212 DED--VAARLRELTDGEGADVVIDATGNPASMEEAVE 246
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 147 bits (374), Expect = 3e-42
Identities = 89/283 (31%), Positives = 124/283 (43%), Gaps = 49/283 (17%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA V +E L +E+V V P EV IK+ +C TD + + G+ P + GHE
Sbjct: 2 KALV-YEGPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA-PPLVPGHE 59
Query: 71 AAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
AG+V +VG VT + GD V I C EC +C+ G+ NLC + T GV
Sbjct: 60 FAGVVVAVGSKVTGFKVGDRVAVDPNIYCG-----ECFYCRRGRPNLCENL---TAVGVT 111
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTG 182
N G F++Y VV V KI ++ L L C
Sbjct: 112 RN--------GG-----------FAEYVVVPAKQVYKIPDNLSFEEAALAEPLSC----- 147
Query: 183 LGAVW--NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
AV + ++PG V VFG G +GL +A+ K GASRV + + +K + AK G
Sbjct: 148 --AVHGLDLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGA 205
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
TE V+P D Q+ + G D E G + A+E
Sbjct: 206 TETVDPSREDPEAQK---EDNPYGFDVVIEATGVPKTLEQAIE 245
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 5e-42
Identities = 83/284 (29%), Positives = 126/284 (44%), Gaps = 50/284 (17%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA V P L ED+ P GEV +K+ +C +D + G P +LGHE
Sbjct: 2 KALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAYH-PPLVLGHE 59
Query: 71 AAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
+G VE VG GV ++ GD V +PC +C++CK G+ +LC
Sbjct: 60 FSGTVEEVGSGVDDLAVGDRVAVNPLLPCG-----KCEYCKKGEYSLCSN---------- 104
Query: 126 MNDRKSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP-- 180
Y ++G+ F++Y V ++ KI ++ ++ P
Sbjct: 105 ---------------YDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIE---PAA 146
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
L AV A + G V V G GT+GL + K GA RVI +DID +K A+ G
Sbjct: 147 VALHAVRL-AGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGA 205
Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283
+ +NPK+ D + + +LT+G G D E G+ + + AL
Sbjct: 206 DDTINPKEED---VEKVRELTEGRGADLVIEAAGSPATIEQALA 246
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
| >gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Score = 146 bits (372), Expect = 7e-42
Identities = 82/288 (28%), Positives = 120/288 (41%), Gaps = 49/288 (17%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KAAV PN + +E+V V P GEV +K+ +C TD G + P ILGHE
Sbjct: 2 KAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHE 60
Query: 71 AAGIVESVGEGVTEVQPGD-----HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
AG + VG+GVT + GD +PC EC +C G N+C +
Sbjct: 61 IAGEIVEVGDGVTGFKVGDRVFVAPHVPCG-----ECHYCLRGNENMCPNYKKFG----- 110
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA-----KIDPQAPLDKVCL---LGC 177
+ G F++Y V +V K+ ++ L L C
Sbjct: 111 ---------------NLYDG--GFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLAC 153
Query: 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
+ A ++PG V V G G +GL A AKA+GA +VI D++ + + AK
Sbjct: 154 CI-----NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKK 208
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
G ++ + D + + +LTDG G D G+ ALE
Sbjct: 209 LGADYTIDAAEEDLV--EKVRELTDGRGADVVIVATGSPEAQAQALEL 254
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343 |
| >gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 9e-42
Identities = 95/300 (31%), Positives = 134/300 (44%), Gaps = 77/300 (25%)
Query: 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPEGLF----PCI 66
AAV P L +E+ + P GEV +++ +C +D + + G+ G F P +
Sbjct: 1 AAVLHGPGD-LRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRI--GDFVVKEPMV 57
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LGHE+AG V +VG GVT ++ GD V +PC R C+FCKSG+ NLC +R
Sbjct: 58 LGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPC-----RTCEFCKSGRYNLCPDMR---- 108
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHD----------VSV---AKID 164
F T T +Y V H VS+ A ++
Sbjct: 109 ---------------------FAATPPVDGTLCRY-VNHPADFCHKLPDNVSLEEGALVE 146
Query: 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 224
P + V + C A V PG V VFG G +GL A AKA GA++V+
Sbjct: 147 PLS----VGVHAC----------RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVV 192
Query: 225 IDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDLTDG-GVDYSFECIGNVSVMRAAL 282
DIDP + + AK G T VN + D P + + +L G G D EC G S ++ A+
Sbjct: 193 TDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAI 252
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343 |
| >gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Score = 139 bits (352), Expect = 5e-39
Identities = 75/268 (27%), Positives = 116/268 (43%), Gaps = 27/268 (10%)
Query: 19 NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPEGLFPCILGHEAAGIVES 77
++ + + + V P GEV +++ + LC +D + + G I GHE AG+V +
Sbjct: 9 DRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVA 68
Query: 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
VG GVT + GD V+ + C C+ C+ G LC +
Sbjct: 69 VGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLC---------------------TSK 107
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
+ Y + ++Y +V + ++ + LL CG+ T A+ V
Sbjct: 108 RAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL-RRVGVSGRDT 166
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257
V V G G VGL A+A GA VIG+D P++ + AK G +N D Q +
Sbjct: 167 VLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD---VQEI 223
Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALEC 284
+LT G G D + EC GN + R ALE
Sbjct: 224 RELTSGAGADVAIECSGNTAARRLALEA 251
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 9e-37
Identities = 84/279 (30%), Positives = 127/279 (45%), Gaps = 31/279 (11%)
Query: 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 67
KAAV E KP ++DV V P GEV +K+ + +CHTD + G P + P I
Sbjct: 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIG 60
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE AG+V +VG GV+ ++ GD V + C +C++C++G LC +G
Sbjct: 61 GHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPN---QKNSG--- 114
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
++++G TF++Y + V I ++ L C T A+
Sbjct: 115 ------YTVDG----------TFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKAL 158
Query: 187 WNTAKVEPGSIVAVFGL-GTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
A ++PG V + G G +G L V AKA G RVI ID+ +K + AK G FV
Sbjct: 159 -KKAGLKPGDWVVISGAGGGLGHLGVQY-AKAMGL-RVIAIDVGDEKLELAKELGADAFV 215
Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
+ K D ++ V GG + + AL+
Sbjct: 216 DFKKSD-DVEAVKELTGGGGAHAVVVTAVSAAAYEQALD 253
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Score = 133 bits (336), Expect = 3e-36
Identities = 84/277 (30%), Positives = 124/277 (44%), Gaps = 20/277 (7%)
Query: 13 AVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
A+ W + +E+V P + +++ TA+C +D + + G P ILGH
Sbjct: 3 ALVWHGKGDVRVEEV--PDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGH 60
Query: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
E G+VE VG V ++ GD V+ + C EC +CK G + C + +
Sbjct: 61 EFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHA 120
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVH----DVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
+ I G H G Q V DV KI +K L +PTG A
Sbjct: 121 GA--GIFGYS--HLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHA 176
Query: 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
A+V+PG VAV+G G VGL A AK GA RVI ID P++ + A++ E +N
Sbjct: 177 A-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETIN 235
Query: 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAA 281
++ D + + L +LT G G D + +G M A
Sbjct: 236 FEEVDDVV-EALRELTGGRGPDVCIDAVG----MEAH 267
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 3e-36
Identities = 72/239 (30%), Positives = 99/239 (41%), Gaps = 31/239 (12%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KAAV PL E+V V P GEV IKI +CHTD + G +P + GHE
Sbjct: 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
G V VG GV + GD V + C C++C+ G NLC K TG
Sbjct: 61 IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVN-TG-------- 111
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN- 188
++ G +++Y V + PL + L C T V++
Sbjct: 112 ---YTTQG----------GYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGIT----VYSA 154
Query: 189 --TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
A PG VAV G+G +G + A+A G + I P K + A+ G E V+
Sbjct: 155 LRDAGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVD 212
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Score = 130 bits (328), Expect = 2e-35
Identities = 79/285 (27%), Positives = 122/285 (42%), Gaps = 42/285 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYT-WSGK--DPEGLFPCIL 67
KA K IE + + ++ A C +D +T W G + G+ IL
Sbjct: 2 KAFAMLGIGKVGWIE-KPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGM---IL 57
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVI-----PCYQAECRECKFCKSGKTNLCGKVRGATGA 122
GHEA G+VE VG V + +PGD VI P ++ + G + G
Sbjct: 58 GHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWR-----SVAAQRGYPSQSG-------- 104
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQAPLDKVCLLGCGVP 180
M+ K +G F++Y V+D ++A + ++ +L +
Sbjct: 105 -GMLGGWKFSNFKDG----------VFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TG A ++ G VAVFG+G VGL GA+ GA R+I + P + + AK +G
Sbjct: 154 TGFHGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGA 212
Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
T+ V+ K+ D ++Q+L LT G GVD G AL+
Sbjct: 213 TDIVDYKNGD-VVEQIL-KLTGGKGVDAVIIAGGGQDTFEQALKV 255
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351 |
| >gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Score = 125 bits (317), Expect = 6e-34
Identities = 78/281 (27%), Positives = 122/281 (43%), Gaps = 34/281 (12%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCIL 67
KAA +E KPL +EDV V P G+V +++ +CH+D + G L P L
Sbjct: 2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTL 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE AG VE VG GV ++ GD V+ + C C++C+ G+ N C
Sbjct: 62 GHENAGWVEEVGSGVDGLKEGDPVV-VHPPWGCGTCRYCRRGEENYC------------E 108
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
N R +G F++Y +V + K+ + L T AV
Sbjct: 109 NARFPGIGTDG----------GFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158
Query: 187 WNTAKV-EPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
+PGS V V G+G +G +AV + +A + VI +D + A+ G +
Sbjct: 159 KKALPYLDPGSTVVVIGVGGLGHIAV-QILRALTPATVIAVDRSEEALKLAERLGADHVL 217
Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
N D +++V +LT G G D + +G+ + A +
Sbjct: 218 NAS--DDVVEEVR-ELTGGRGADAVIDFVGSDETLALAAKL 255
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340 |
| >gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 2e-33
Identities = 90/271 (33%), Positives = 125/271 (46%), Gaps = 36/271 (13%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQ---AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
KA V P K I P + +K+L T +C TD + G P IL
Sbjct: 2 KALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRIL 58
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE G+VE VG VT + GD V I C + C C +C+ G + C +G ++
Sbjct: 59 GHEGVGVVEEVGSAVTNFKVGDRVLISCISS-CGTCGYCRKGLYSHC-----ESGGWILG 112
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYT-VVH-DVSVAKIDPQAPLDKVCLLGCGVPTGL- 183
N I+G T ++Y + H D S+ K+ + +L +PTG
Sbjct: 113 NL------IDG----------TQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156
Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
V N KV+PG VA+ G G VGLA A+ S++I +D+D + + AK G T
Sbjct: 157 CGVLN-GKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHT 215
Query: 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
VN D I+QVL +LTDG GVD E +G
Sbjct: 216 VNSAKGD-AIEQVL-ELTDGRGVDVVIEAVG 244
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 3e-33
Identities = 92/289 (31%), Positives = 126/289 (43%), Gaps = 52/289 (17%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDA--YTW-----SGKDPEGLF 63
KA V + + +V V P GEV IK+L ++C TD Y W S P
Sbjct: 2 KAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKP---- 57
Query: 64 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAE----CRECKFCKSGKTNLCGKVRGA 119
P I GHE AG V VGEGVT V+ GD+V AE C +C C++G ++C +
Sbjct: 58 PLIFGHEFAGEVVEVGEGVTRVKVGDYV----SAETHIVCGKCYQCRTGNYHVCQNTK-- 111
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 176
GV D +G F++Y VV + ++ K D P + + LG
Sbjct: 112 -ILGV---DT------DG----------CFAEYVVVPEENLWKNDKDIPPEIASIQEPLG 151
Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
V T L V G V + G G +GL AKAAGAS VI D +P + + AK
Sbjct: 152 NAVHTVL-----AGDV-SGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAK 205
Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 285
G +NP++ D + +V GVD E GN + L+
Sbjct: 206 KMGADVVINPREED--VVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKAL 252
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 123 bits (312), Expect = 4e-33
Identities = 73/262 (27%), Positives = 111/262 (42%), Gaps = 36/262 (13%)
Query: 19 NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVES 77
+ L D+ P EV +++ AL H D + G L P ILG + AG+VE+
Sbjct: 12 PEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEA 71
Query: 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
VG GVT V+PG V+ C C++C +G+ NLC +++ I G
Sbjct: 72 VGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLC-----------------AQYGILG 114
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT----AKVE 193
H G +++Y V ++ I ++ P W+ A++
Sbjct: 115 ---EHVDG--GYAEYVAVPARNLLPIPDNLSFEE----AAAAPLTFLTAWHMLVTRARLR 165
Query: 194 PGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252
PG V V G G+ VG A + AK GA VI K +RAK G ++ + D
Sbjct: 166 PGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVIDYRKEDFV 224
Query: 253 IQQVLVDLTDG-GVDYSFECIG 273
+ + +LT GVD E +G
Sbjct: 225 --REVRELTGKRGVDVVVEHVG 244
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 121 bits (305), Expect = 4e-32
Identities = 72/247 (29%), Positives = 102/247 (41%), Gaps = 28/247 (11%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
K A + + L + P +V IKI + +CH+D +T + +P + GHE
Sbjct: 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
GIV +VG VT+ + GD V + C C C+ CKSG+ C K
Sbjct: 61 IVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY--------- 111
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA-VWN 188
NGK + ++ + VV + V KI L C G V++
Sbjct: 112 ------NGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCA-----GITVYS 160
Query: 189 ---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
V PG V V G+G +G LAV + AKA GA V P K + A G EF+
Sbjct: 161 PLKRNGVGPGKRVGVVGIGGLGHLAV-KFAKALGA-EVTAFSRSPSKKEDALKLGADEFI 218
Query: 245 NPKDHDK 251
KD +
Sbjct: 219 ATKDPEA 225
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 6e-32
Identities = 76/275 (27%), Positives = 127/275 (46%), Gaps = 27/275 (9%)
Query: 13 AVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEA 71
AV ++ + +E+V + + +K+ A+C +D + + G P +LGHE
Sbjct: 3 AVVFKGPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPSTP-GFVLGHEF 61
Query: 72 AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKS 131
G V VG V ++ GD V+ + C EC +C+ G++ C K AG
Sbjct: 62 VGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAG-------- 113
Query: 132 RFSINGKPIYHFMGTSTFSQYTVV--HDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT 189
+++G ++Y V D ++ K+ + LLG +PTG
Sbjct: 114 SPNLDGAQ----------AEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR- 162
Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
A+V PG VAV G G VGL A+ GA+RV +D P++ +RA G E +N +D
Sbjct: 163 AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALG-AEPINFED- 220
Query: 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283
+P+++V + T+G G D E +G + + A +
Sbjct: 221 AEPVERVR-EATEGRGADVVLEAVGGAAALDLAFD 254
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344 |
| >gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Score = 120 bits (303), Expect = 7e-32
Identities = 79/289 (27%), Positives = 111/289 (38%), Gaps = 36/289 (12%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG------------KD 58
KAA EP KPL ++ P EV +K+ +CH+D + W G D
Sbjct: 2 KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDD 61
Query: 59 PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118
P +LGHE G V +VG +V+ GD V+ C EC C +G NLC K R
Sbjct: 62 RGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGR- 120
Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
A G I+ G +++Y +V L C
Sbjct: 121 ALG------------------IFQDGG---YAEYVIVPHSRYLVDPGGLDPALAATLACS 159
Query: 179 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
T AV + V + G G +GL KA G + +I +DID K + AK
Sbjct: 160 GLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAA 219
Query: 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
G VN D D + ++ GGVD + + N + A + K
Sbjct: 220 GADVVVNGSDPDAAKR--IIKAAGGGVDAVIDFVNNSATASLAFDILAK 266
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 115 bits (290), Expect = 3e-30
Identities = 66/222 (29%), Positives = 94/222 (42%), Gaps = 25/222 (11%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA + + IE+V P EV IK+ + LC+ D G P +P ILGHE
Sbjct: 2 KAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHE 61
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
G VE VGE V +PGD V A C++C+SG+ C K
Sbjct: 62 VVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYC----------------K 105
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA 190
+R G+ + F F++Y V S+ K+ P + ++ C + A
Sbjct: 106 NRLGY-GEELDGF-----FAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGL-RRA 158
Query: 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231
V+ G V V G G VG+ + AKA GA +VI + K
Sbjct: 159 GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESK 199
|
Length = 334 |
| >gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 113 bits (284), Expect = 2e-29
Identities = 77/268 (28%), Positives = 112/268 (41%), Gaps = 43/268 (16%)
Query: 26 DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85
+V P GEV IK+ +C +D + + G P +LGHE +G + VG V
Sbjct: 18 EVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGW 77
Query: 86 QPGDHVIPCYQAE-CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 144
+ GD V+ C C +C+ G NLC R G +G
Sbjct: 78 KVGDRVVSETTFSTCGRCPYCRRGDYNLCPH-RKGIGTQA-----------DG------- 118
Query: 145 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGSIVAVF 201
F++Y +V + S+ ++ L+ L L V AV + + PG V VF
Sbjct: 119 ---GFAEYVLVPEESLHELPENLSLEAAALTEPLAVAV----HAVAERSGIRPGDTVVVF 171
Query: 202 GLGTVGLAVAEGAKAAGASRVI-GIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD- 259
G G +GL A+ AK GA+ V+ G + D + D AK G D ++ L +
Sbjct: 172 GPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGA-------DAVNGGEEDLAEL 224
Query: 260 ---LTDG-GVDYSFECIGNVSVMRAALE 283
+TDG G D EC G V + ALE
Sbjct: 225 VNEITDGDGADVVIECSGAVPALEQALE 252
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306 |
| >gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Score = 109 bits (276), Expect = 7e-28
Identities = 81/245 (33%), Positives = 115/245 (46%), Gaps = 32/245 (13%)
Query: 39 IKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQ 96
++I TA+C +D + + G+ GL +LGHEA G VE VG V ++ GD V+ +
Sbjct: 30 VRITTTAICGSDLHMYRGRTGAEPGL---VLGHEAMGEVEEVGSAVESLKVGDRVVVPFN 86
Query: 97 AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ--YTV 154
C C+ CK G T +C V G Y MG Q Y
Sbjct: 87 VACGRCRNCKRGLTGVCLTVNPGRAGGAYG--------------YVDMGPYGGGQAEYLR 132
Query: 155 V--HDVSVAKIDPQAP----LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGL 208
V D ++ K+ + D + L PTG + A V+PG VAVFG G VGL
Sbjct: 133 VPYADFNLLKLPDRDGAKEKDDYLMLSDI-FPTGWHGL-ELAGVQPGDTVAVFGAGPVGL 190
Query: 209 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268
A A GASRV +D P++ D A++ G ++ D D P++Q+L L GGVD +
Sbjct: 191 MAAYSAILRGASRVYVVDHVPERLDLAESIGA-IPIDFSDGD-PVEQIL-GLEPGGVDRA 247
Query: 269 FECIG 273
+C+G
Sbjct: 248 VDCVG 252
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375 |
| >gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 105 bits (265), Expect = 2e-26
Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 11 KAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
KA V +P PL + +V V P GEV IK+ +C TD + G P P I
Sbjct: 2 KAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLI 61
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
GHE G VE+VG GVT GD V +P + C EC++C+SG+ NLC R TG
Sbjct: 62 PGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNAR-FTG---- 116
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
++++G +++Y V + I ++ L C G A
Sbjct: 117 -------YTVDGG----------YAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159
Query: 186 VWNTAKVEPGSIVAVFGLGTVG-----LAVAEGAKAAGASR 221
+ A ++PG + ++G G +A +GA+ +R
Sbjct: 160 L-KLAGLKPGQRLGLYGFGASAHLALQIARYQGAEVFAFTR 199
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329 |
| >gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain | Back alignment and domain information |
|---|
Score = 99.6 bits (249), Expect = 2e-26
Identities = 40/133 (30%), Positives = 60/133 (45%), Gaps = 28/133 (21%)
Query: 34 AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIP 93
GEV +++ +C +D + + G+ P P ILGHE AGIVE VG GVT ++ GD V+
Sbjct: 1 PGEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVV 60
Query: 94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTS---TFS 150
C +C C+ G+ NLC P F+G F+
Sbjct: 61 YPLIPCGKCAACREGRENLC-------------------------PNGKFLGVHLDGGFA 95
Query: 151 QYTVVHDVSVAKI 163
+Y VV ++ +
Sbjct: 96 EYVVVPARNLVPL 108
|
This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108 |
| >gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 6e-26
Identities = 72/280 (25%), Positives = 106/280 (37%), Gaps = 54/280 (19%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF-------PCILGHEAAGI 74
L +E+ P GEVR+++ +C +D + + G F P +LGHE +G+
Sbjct: 9 LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQ----HGGFGTVRLREPMVLGHEVSGV 64
Query: 75 VESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS 134
VE+VG GVT + PG V C C +C++G+ NLC +R
Sbjct: 65 VEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMR----------------- 107
Query: 135 INGKPIYHFMGTST--------FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP--TGLG 184
F+G++ F +Y VV + L P L
Sbjct: 108 --------FLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLR---RAALAEPLAVALH 156
Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
AV N A G V V G G +G V A+ AGA+ ++ D+ A+ G E V
Sbjct: 157 AV-NRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETV 215
Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
N G D FE G + + +AL
Sbjct: 216 NLARDPLAAYAAD----KGDFDVVFEASGAPAALASALRV 251
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339 |
| >gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-25
Identities = 80/285 (28%), Positives = 119/285 (41%), Gaps = 36/285 (12%)
Query: 11 KAAVAWEPNKPLV--IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
+A V P V + D + P + I+++ T +C +D + + G P P +G
Sbjct: 2 RATVIHGPGDIRVEEVPDPVIEEP--TDAVIRVVATCVCGSDLWPYRGVSPTR-APAPIG 58
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
HE G+VE VG VT V+PGD VI + C FC++G T C
Sbjct: 59 HEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSC--------------- 103
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCL-----LGCGVPTG 182
++G F+ V D ++ K+ D+ L L + TG
Sbjct: 104 ------VHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMGTG 157
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242
A +A V PGS V V G G VGL AK GA R+I + + A+ FG T+
Sbjct: 158 HHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATD 216
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH 286
V + ++ + +V +LT G G D EC+G M A+
Sbjct: 217 IVAERG-EEAVARVR-ELTGGVGADAVLECVGTQESMEQAIAIAR 259
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345 |
| >gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Score = 103 bits (259), Expect = 1e-25
Identities = 81/289 (28%), Positives = 120/289 (41%), Gaps = 53/289 (18%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-------PEGLF 63
KA V + L + DV V P +V IK+ TA+C TD + ++ +
Sbjct: 2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPV---- 57
Query: 64 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAE----CRECKFCKSGKTNLCGKVRGA 119
P ++GHE G V VG VT + GD V E C C+ C++G+ +LC R
Sbjct: 58 PMVVGHEFVGEVVEVGSEVTGFKVGDRV----SGEGHIVCGHCRNCRAGRRHLC---RNT 110
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LG 176
G GV +R G F++Y V+ +V KI P D + G
Sbjct: 111 KGVGV---NR------PG----------AFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFG 151
Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
V T L ++ G V + G G +G+ A AK GA V+ D++ + + A+
Sbjct: 152 NAVHTALS--FDLV----GEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR 205
Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
G T VN D ++ V+ +L G D E G S R L+
Sbjct: 206 KMGATRAVNVAKED--LRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDN 252
|
Length = 341 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-25
Identities = 66/268 (24%), Positives = 100/268 (37%), Gaps = 54/268 (20%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCIL 67
KA V E P L + +V P GEV +++ + D G P P I
Sbjct: 2 KAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIP 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
G EAAG+V +VG GVT + GD V G G
Sbjct: 62 GSEAAGVVVAVGSGVTGFKVGDRVAALGG--------------------VGRDGG----- 96
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
+++Y VV + + ++ L T A++
Sbjct: 97 ---------------------YAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALF 135
Query: 188 NTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
+ A ++PG V V G G VG A + AKA GA V+ + +K + K G +N
Sbjct: 136 DRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVINY 194
Query: 247 KDHDKPIQQVLVDLTDG-GVDYSFECIG 273
++ D + + +LT G GVD + +G
Sbjct: 195 REED--FVEQVRELTGGKGVDVVLDTVG 220
|
Length = 326 |
| >gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Score = 98.8 bits (246), Expect = 8e-24
Identities = 82/268 (30%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 23 VIEDVQVAPPQAGEVRIKILFTALCHTDA--YTWSGKDPEGL-FPCILGHEAAGIVESVG 79
+ +V V P GEV IK+L T++C TD Y W + P ++GHE AG V +G
Sbjct: 12 ELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIG 71
Query: 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139
GV ++ GD+V C +C C+ G+ ++C + GV D
Sbjct: 72 PGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVC---QNTKIFGV---DT---------- 115
Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPGS 196
F++Y VV ++ K P + + LG V T L A G
Sbjct: 116 ------DGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTVL------AGPISGK 163
Query: 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 256
V V G G +GL AKA+GA VI D + + + AK G T VNP D + +
Sbjct: 164 SVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKED--VVKE 221
Query: 257 LVDLTDG-GVDYSFECIGNVSVMRAALE 283
+ DLTDG GVD E G + L+
Sbjct: 222 VADLTDGEGVDVFLEMSGAPKALEQGLQ 249
|
This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340 |
| >gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 98.1 bits (245), Expect = 9e-24
Identities = 74/245 (30%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA EP PL + + V P GEV IK+ +CH+DA+ G P +P + GHE
Sbjct: 2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHE 61
Query: 71 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVMMN 127
G +++VGEGV+ + GD V + + C C C+ G C GKV G T G
Sbjct: 62 VVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDG---- 117
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAV 186
+++Y + ++A+I D + LL GV T A+
Sbjct: 118 --------------------GYAEYMLAPAEALARIPDDLDAAEAAPLLCAGV-TTFNAL 156
Query: 187 WNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
N+ +PG +VAV G+G +G LAV + A G R + I K D A+ G +++
Sbjct: 157 RNS-GAKPGDLVAVQGIGGLGHLAV-QYAAKMGF-RTVAISRGSDKADLARKLGAHHYID 213
Query: 246 PKDHD 250
D
Sbjct: 214 TSKED 218
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333 |
| >gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 3e-23
Identities = 79/266 (29%), Positives = 120/266 (45%), Gaps = 45/266 (16%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILG 68
KAAV + + V+ + + P + GE +K+ + +CHTD + +G D G ILG
Sbjct: 2 KAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDKTG---RILG 58
Query: 69 HEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
HE GIV+ VG GVT ++ GD V I + C C++C +G+ LC V+ A
Sbjct: 59 HEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAG------- 111
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA---KIDPQAPLDKVCLLGCGVPTGLG 184
++++G M Q V D +V +DP C GV T
Sbjct: 112 -----YTVDGG-----MAE----QCIVTADYAVKVPEGLDPAQASSITC---AGV-TTYK 153
Query: 185 AVWNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
A+ + ++PG +A++G G +G LA+ A +VI +DI+ K AK G
Sbjct: 154 AI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLT 211
Query: 244 VNPK---DHDKPIQQVLVDLTDGGVD 266
+N K D K IQ+ GG
Sbjct: 212 INSKRVEDVAKIIQE-----KTGGAH 232
|
Length = 338 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 94.6 bits (236), Expect = 2e-22
Identities = 72/287 (25%), Positives = 96/287 (33%), Gaps = 60/287 (20%)
Query: 11 KAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
KAAV P LV+ DV V P EV +K+ AL D +P ILG
Sbjct: 2 KAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI-PSYPAILGC 60
Query: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
+ AG V VG GVT + GD V G N
Sbjct: 61 DFAGTVVEVGSGVTRFKVGDRVA----------------------------GFVHGGNPN 92
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT-------- 181
R F +Y V AKI ++ L G+ T
Sbjct: 93 DPR-------------NGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQK 139
Query: 182 -GLGAVW-NTAKVEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
GL + G V ++G + VG + AK AG +VI PK FD K+
Sbjct: 140 LGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITT-ASPKNFDLVKSL 197
Query: 239 GVTEFVNPKD-HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
G D HD + + + T G + Y+ +CI + E
Sbjct: 198 GADAVF---DYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEA 241
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 4e-22
Identities = 66/234 (28%), Positives = 103/234 (44%), Gaps = 42/234 (17%)
Query: 36 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV---- 91
+V +K+ + LC +D +P LGHE +G VE+VG GV ++ PGD V
Sbjct: 27 DVLVKVASSGLCGSDIPRIFKNGAH-YYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVP 85
Query: 92 -IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF- 149
+PC+ C C G +LC K Y F+G+
Sbjct: 86 LLPCFT-----CPECLRGFYSLCAK-------------------------YDFIGSRRDG 115
Query: 150 --SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVG 207
++Y VV ++ + P++ + + GL A ++ A+ G V + G GT+G
Sbjct: 116 GNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHA-FHLAQGCEGKNVIIIGAGTIG 173
Query: 208 LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP-IQQVLVDL 260
L + A A GA V IDI+ +K AK+ G + N ++ P IQ VL +L
Sbjct: 174 LLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLREL 227
|
Length = 347 |
| >gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 2e-21
Identities = 59/260 (22%), Positives = 93/260 (35%), Gaps = 65/260 (25%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDPE--GLFPCILGHEAAGIVESV 78
+E+ P G+V +++ +C +D ++ G+ P GHE G V ++
Sbjct: 7 FEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVAL 66
Query: 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 138
G GV + GD V
Sbjct: 67 GPGVRGLAVGDRVA---------------------------------------------- 80
Query: 139 PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLGAVWNTAKVEPG 195
+ F++Y + + P + LGC + V+ + G
Sbjct: 81 ----GLSGGAFAEYDLADADHAVPL-PSLLDGQAFPGEPLGCAL-----NVFRRGWIRAG 130
Query: 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
VAV G G +GL + A AAGA RVI ID P + A+ G TE V D + +++
Sbjct: 131 KTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVV-TDDSEAIVER 189
Query: 256 VLVDLTDG-GVDYSFECIGN 274
V +LT G G D E +G+
Sbjct: 190 V-RELTGGAGADVVIEAVGH 208
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312 |
| >gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 92.2 bits (229), Expect = 3e-21
Identities = 78/269 (28%), Positives = 119/269 (44%), Gaps = 40/269 (14%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL--------FPCILGHEAAG 73
L +EDV V + E+ I++ +C +D + + D +G FP ++GHE +G
Sbjct: 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYE-TDKDGYILYPGLTEFPVVIGHEFSG 97
Query: 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 133
+VE G+ V + GD V C C+ C+SG N C N ++ F
Sbjct: 98 VVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC------------KNLKELGF 145
Query: 134 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL---DKVCLLGCGV-PTGL---GAV 186
S +G F++Y V+ +I+ + DK G V PT + G
Sbjct: 146 SADG----------AFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPTSVAYNGLF 195
Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
PG+ V V+G G +GLA AKAAGAS+VI +I ++ + AK G NP
Sbjct: 196 IRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255
Query: 247 -KDHDKPIQQVLVDLTDG-GVDYSFECIG 273
K D + ++++T G G D E G
Sbjct: 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAG 284
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384 |
| >gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Score = 90.7 bits (225), Expect = 6e-21
Identities = 77/233 (33%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD-AYTWSGKDPEGLFPCILGHEAAGIV 75
EP KP+V V++ AG+V +K+ +CHTD +Y + G P LGHE +G V
Sbjct: 6 EPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRV 65
Query: 76 ESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI 135
G G G VI C EC+ CK+G+ +C R G ND + F+
Sbjct: 66 IQAGAG-AASWIGKAVIVPAVIPCGECELCKTGRGTIC---RAQKMPG---NDMQGGFA- 117
Query: 136 NGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG 195
H + + VV + +A PL+ V ++ V T A A ++ G
Sbjct: 118 -----SHIVVPAKG--LCVVDEARLAAAG--LPLEHVSVVADAVTTPYQAAVQ-AGLKKG 167
Query: 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248
+V V G G VG + + AKA GA+ V+ IDIDP+K + K FG +NPKD
Sbjct: 168 DLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKD 219
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 2e-20
Identities = 62/281 (22%), Positives = 93/281 (33%), Gaps = 67/281 (23%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQA--GEVRIKILFTALCHTDAYTWSG---KDPEGLFPC 65
KA E P V+E V P+ GEV +K+ + D G P
Sbjct: 2 KAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPL 61
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
I GH+ AG+V +VG GVT + GD V
Sbjct: 62 IPGHDVAGVVVAVGPGVTGFKVGDEVF--------------------------------- 88
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----T 181
G + G +++Y VV +A + +P T
Sbjct: 89 -----------GMTPFTRGG--AYAEYVVVPADELALKPANLSFE----EAAALPLAGLT 131
Query: 182 GLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
A++ ++ G V + G G VG + AKA GA RVI D ++ G
Sbjct: 132 AWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIAT-ASAANADFLRSLGA 189
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAA 281
E ++ D GGVD + +G ++ R+
Sbjct: 190 DEVIDYTKGD-----FERAAAPGGVDAVLDTVGGETLARSL 225
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 86.9 bits (216), Expect = 5e-20
Identities = 56/224 (25%), Positives = 78/224 (34%), Gaps = 62/224 (27%)
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
P G+ + G V VG GVT +PGD V FC
Sbjct: 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRV------------FC---------------- 50
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
G ++ VV + + P ++ L T
Sbjct: 51 ----------------------FGPH--AERVVVPANLLVPLPDGLPPERAALTALA-AT 85
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
L V + A+ G VAV GLG VGL A+ AKAAGA V+G+D D + + A+ G
Sbjct: 86 ALNGVRD-AEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPA 144
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 285
+ V D ++ G D E G+ S + AL
Sbjct: 145 DPVAADTAD--------EIGGRGADVVIEASGSPSALETALRLL 180
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 85.6 bits (213), Expect = 3e-19
Identities = 74/268 (27%), Positives = 106/268 (39%), Gaps = 57/268 (21%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
KA V E P LV+E+V P GEVRI++ + D GK P +
Sbjct: 2 KAVVCKELGGPEDLVLEEVPPEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVP 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
G E AG+VE+VGEGVT + GD V+ TG G
Sbjct: 62 GSEVAGVVEAVGEGVTGFKVGDRVV-------------------------ALTGQG---- 92
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
F++ VV +V + ++ L T A+
Sbjct: 93 --------------------GFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALV 132
Query: 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
A+++PG V V G G VGLA + AKA GA RVI +K A+ G ++
Sbjct: 133 RRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVIDY 191
Query: 247 KDHDKPIQQVLVDLTDG-GVDYSFECIG 273
D +++ + LT G GVD ++ +G
Sbjct: 192 --RDPDLRERVKALTGGRGVDVVYDPVG 217
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 80.8 bits (200), Expect = 5e-19
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 206 VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G 264
VGLA + AKA GA+RVI +D +K + AK G +N +D D + + +LT G G
Sbjct: 2 VGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDED--FVERVRELTGGRG 59
Query: 265 VDYSFECIGNVSVMRAALECCHK 287
VD +C+G + + ALE
Sbjct: 60 VDVVIDCVGAPATLEQALELLRP 82
|
Length = 131 |
| >gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Score = 83.7 bits (207), Expect = 2e-18
Identities = 75/279 (26%), Positives = 113/279 (40%), Gaps = 47/279 (16%)
Query: 20 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY---TWSGKDPEGLFPCILGHEAAGIVE 76
L I+ ++ P +VR+++ +C +D + T D P ++GHE AGI+E
Sbjct: 27 NTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIE 86
Query: 77 SVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN 136
VG V + GD V C C CK G+ NLC
Sbjct: 87 EVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLC----------------------- 123
Query: 137 GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--------LGCGVPTGLGAVWN 188
P F T V A + + P + V L L GV
Sbjct: 124 --PEMKFFATPPVHGSLANQVVHPADLCFKLP-ENVSLEEGAMCEPLSVGVHA-----CR 175
Query: 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV---- 244
A + P + V V G G +GL A+A GA R++ +D+D ++ AK G E V
Sbjct: 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVST 235
Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
N +D + ++++ + GG+D SF+C+G M ALE
Sbjct: 236 NIEDVESEVEEIQKAMG-GGIDVSFDCVGFNKTMSTALE 273
|
Length = 364 |
| >gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Score = 83.4 bits (206), Expect = 3e-18
Identities = 78/245 (31%), Positives = 114/245 (46%), Gaps = 25/245 (10%)
Query: 37 VRIKILFTALCHTDAYTWSGKD--PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPC 94
V +K++ T +C +D + G+ P GL +LGHE G V G V ++ GD V
Sbjct: 36 VILKVVTTNICGSDQHMVRGRTTAPTGL---VLGHEITGEVIEKGRDVEFIKIGDIVSVP 92
Query: 95 YQAECRECKFCKSGKTNLCGKVR----GATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150
+ C C+ CK G T +C V GA V M + G+ Y + + F+
Sbjct: 93 FNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGW-----VGGQSEYVMVPYADFN 147
Query: 151 QYTVV-HDVSVAKIDPQAPLDKVCLLGCGVPTGL-GAVWNTAKVEPGSIVAVFGLGTVGL 208
D ++ KI D L PTG GAV TA V PGS V + G G VGL
Sbjct: 148 LLKFPDRDQALEKI-----RDLTMLSDI-FPTGYHGAV--TAGVGPGSTVYIAGAGPVGL 199
Query: 209 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268
A A A+ GA+ VI D++P + +A++FG E V+ +Q+ L + VD +
Sbjct: 200 AAAASAQLLGAAVVIVGDLNPARLAQARSFGC-ETVDLSKDATLPEQIEQILGEPEVDCA 258
Query: 269 FECIG 273
+C+G
Sbjct: 259 VDCVG 263
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393 |
| >gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 5e-18
Identities = 68/252 (26%), Positives = 107/252 (42%), Gaps = 36/252 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
K+ V +PN L IE+ + P AGEVR+K+ +C +D++ + G +P +P ++GHE
Sbjct: 2 KSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
G++++VGEGV + G+ V C C C GK N+C
Sbjct: 61 FFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVC----------------- 103
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV---PTGLGA-V 186
+ + G H G FS+Y VV + +I P A D+ V P + A V
Sbjct: 104 TSLVVLG---VHRDG--GFSEYAVVPAKNAHRI-PDAIADQ-----YAVMVEPFTIAANV 152
Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN 245
+ ++G G VGL + + K VI D ++ AK G +N
Sbjct: 153 TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVIN 212
Query: 246 PKDHDKPIQQVL 257
P+ + L
Sbjct: 213 NAQE--PLGEAL 222
|
Length = 339 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 79.8 bits (198), Expect = 3e-17
Identities = 75/271 (27%), Positives = 106/271 (39%), Gaps = 68/271 (25%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
L EDV V P GEV ++ + D Y SG P L P +LG E AG+VE+VG G
Sbjct: 14 LEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPLPL-PFVLGVEGAGVVEAVGPG 72
Query: 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
VT + GD V Y
Sbjct: 73 VTGFKVGDRV--AY---------------------------------------------- 84
Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV---CLLGCGVPTGLGA---VWNTAKVEPG 195
+++Y VV + K+ P D+ LL GL A + T V+PG
Sbjct: 85 -AGPPGAYAEYRVVPASRLVKL-PDGISDETAAALLL-----QGLTAHYLLRETYPVKPG 137
Query: 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254
V V G VGL + + AKA GA VIG +K + A+ G +N +D D +
Sbjct: 138 DTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYRDEDFV-E 195
Query: 255 QVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
+V ++T G GVD ++ +G +L+
Sbjct: 196 RVR-EITGGRGVDVVYDGVG-KDTFEGSLDS 224
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 79.8 bits (197), Expect = 5e-17
Identities = 73/284 (25%), Positives = 115/284 (40%), Gaps = 54/284 (19%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---------KDPEG 61
+A V P + +E+V V P GE+ +K+ +C D + G + P
Sbjct: 2 RAVVCHGP-QDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYV 60
Query: 62 LFPCILGHEAAGIVESVGEGVTE--VQPGDHVIPCYQAECRECKFCKSG------KTNLC 113
P I GHE G V +GEG E V+ GD VI C C+FC G K +L
Sbjct: 61 KPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLY 120
Query: 114 GKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173
G G + +M F + +VH K+ P +
Sbjct: 121 GFQNNVNGG-----------------MAEYM---RFPKEAIVH-----KVPDDIPPEDAI 155
Query: 174 L---LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230
L L C L AV + A ++ +V + G G +GL + A+ ++I +D+ +
Sbjct: 156 LIEPLACA----LHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDE 210
Query: 231 KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
+ A+ FG +NP + D ++++ +LT G G D E G
Sbjct: 211 RLALARKFGADVVLNPPEVDV-VEKIK-ELTGGYGCDIYIEATG 252
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 1e-16
Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 39/269 (14%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY----TWSGKDPEGLFPCILGHEAAGIVES 77
L + + V P GEV +++ +L + D + + L P + AG V +
Sbjct: 15 LKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPL---SDGAGEVVA 71
Query: 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
VGEGVT + GD V+P + L G A + I+G
Sbjct: 72 VGEGVTRFKVGDRVVPTFFP------------NWLDGPPTAEDEASAL------GGPIDG 113
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSI 197
++Y V+ + + + ++ L C T A++ ++PG
Sbjct: 114 ----------VLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDT 163
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257
V V G G V L + AKAAGA RVI +K +RAK G +N + ++VL
Sbjct: 164 VLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVL 222
Query: 258 VDLTDG-GVDYSFECIGNVSVMRAALECC 285
LT G GVD+ E +G + +++
Sbjct: 223 -KLTGGRGVDHVVE-VGGPGTLAQSIKAV 249
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 2e-15
Identities = 63/280 (22%), Positives = 103/280 (36%), Gaps = 50/280 (17%)
Query: 19 NKPLVIEDVQVAPPQAGEVRIKILFTALCHTD----------AYTWSGKDPEGLF-PCIL 67
+ PLV+ DV P G+V +K+L +C +D G L +L
Sbjct: 8 DGPLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVL 67
Query: 68 GHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE G V G G +++ G V C + C G + A G
Sbjct: 68 GHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP------EAPGG---- 117
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+++Y ++ + + ++ ++ L + GL AV
Sbjct: 118 ----------------------YAEYMLLSEALLLRVPDGLSMEDAALTE-PLAVGLHAV 154
Query: 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
A++ PG + V G G +GLAV KA G ++ D P++ A G V+P
Sbjct: 155 -RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDP 213
Query: 247 KDHDKPIQQVLVDLTDGGV---DYSFECIGNVSVMRAALE 283
D P +L G FEC+G +++ +E
Sbjct: 214 AA-DSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIE 252
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 73.5 bits (181), Expect = 5e-15
Identities = 61/218 (27%), Positives = 91/218 (41%), Gaps = 28/218 (12%)
Query: 11 KAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
A+ +E + + L +EDV+ P GEV I++ + D + + + P I G
Sbjct: 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVKVKPM-PHIPG 59
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
E AG+VE VG+ V V+ GD V+ + C C SG LC R GV+ N
Sbjct: 60 AEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLC---RNGGIIGVVSN- 115
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
+++Y VV + ++ KI + L T A+
Sbjct: 116 ------------------GGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHAL-K 156
Query: 189 TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225
TA + PG V VFG G G+ + AK GA VI +
Sbjct: 157 TAGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAV 193
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 5e-15
Identities = 60/259 (23%), Positives = 96/259 (37%), Gaps = 54/259 (20%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGE 80
L + D+ V P GEV +++ + + D Y +G P + G + AG+VE+VGE
Sbjct: 15 LRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGE 74
Query: 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
GV ++ GD V + + G
Sbjct: 75 GVDGLKVGDRV------------WLTNLGWG------RRQG------------------- 97
Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK-VCLLGCGVP--TGLGAVWNTAKVEPGSI 197
T ++Y VV + + ++ L G+P T A+++ A + G
Sbjct: 98 -------TAAEYVVVPADQLVPLPDGVSFEQGAAL---GIPALTAYRALFHRAGAKAGET 147
Query: 198 VAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQV 256
V V G G VG A + A+ AGA RVI + + + G N + D ++
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFNYRAED-LADRI 205
Query: 257 LVDLTDGGVDYSFECIGNV 275
L GVD E + NV
Sbjct: 206 LAATAGQGVDVIIEVLANV 224
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 71.8 bits (176), Expect = 3e-14
Identities = 63/221 (28%), Positives = 91/221 (41%), Gaps = 24/221 (10%)
Query: 36 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
+V +KIL+ +CH+D +T + +P + GHE GIV +G+ V + + GD V +
Sbjct: 39 DVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGV 98
Query: 95 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT- 153
C+ C+ C N C K M+ F+ N I H GT + Y+
Sbjct: 99 IVGSCKSCESCDQDLENYCPK---------MI------FTYNS--IGH-DGTKNYGGYSD 140
Query: 154 --VVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 211
VV V + PLD L C T + EPG + V GLG +G
Sbjct: 141 MIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200
Query: 212 EGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDK 251
+ KA G +V I K D A G F+ D +K
Sbjct: 201 KIGKAFGL-KVTVISSSSNKEDEAINRLGADSFLVSTDPEK 240
|
Length = 360 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 71.5 bits (176), Expect = 3e-14
Identities = 65/272 (23%), Positives = 106/272 (38%), Gaps = 57/272 (20%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
KA V +P P L + ++ + P+ G V I++ L ++ +T G P FP +LG
Sbjct: 2 KAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLG 61
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
EA G VE G PG V AT G M
Sbjct: 62 IEAVGEVEEAPGG--TFTPGQRV---------------------------ATAMGGMG-- 90
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
+ +G ++++YT+V + V ID ++ L T G+++
Sbjct: 91 ----RTFDG----------SYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFR 136
Query: 189 TAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVN 245
+ ++PG + + G GT VGLA + AKA GA V P++ K G E ++
Sbjct: 137 SLGLQPGDTLLIRG-GTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194
Query: 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277
+ ++ GG D E +G ++
Sbjct: 195 DGAIAEQLRAA-----PGGFDKVLELVGTATL 221
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 70.7 bits (174), Expect = 6e-14
Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGE 80
L IE++ V P AGEV I++ L DA G E P LG+EAAG+VE+VG
Sbjct: 15 LRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGA 74
Query: 81 GVTEVQPGDHV 91
GVT GD V
Sbjct: 75 GVTGFAVGDRV 85
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 1e-13
Identities = 52/225 (23%), Positives = 84/225 (37%), Gaps = 26/225 (11%)
Query: 66 ILGHEAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
+LGHE G V ++ G T ++ G V+ C C C+ G C +R
Sbjct: 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKY 60
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV-VHDVSVAKIDPQAPLDKVCLLGCG 178
+ ++++ ++ + P GC
Sbjct: 61 GHE---------ALDSGWPL------SGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCA 105
Query: 179 VPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
T + A+ ++ G V V G G +GL A A AAGA+RV+ D P + + A +F
Sbjct: 106 TATVMAALEAAGDLK-GRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSF 164
Query: 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
G T P + ++ GVD + E G + +RA LE
Sbjct: 165 GATALAEP---EVLAERQGGLQNGRGVDVALEFSGATAAVRACLE 206
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 4e-12
Identities = 63/270 (23%), Positives = 102/270 (37%), Gaps = 58/270 (21%)
Query: 10 CKAAVAWEPNKPLVIEDVQVA--PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
KA V +P L + ++ P AGEV +K+ L D + P +P +
Sbjct: 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVP 60
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
G + AG+V +VG VT + GD V
Sbjct: 61 GVDGAGVVVAVGAKVTGWKVGDRV------------------------------------ 84
Query: 128 DRKSRFSINGKPIYHFMGTS--TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
YH +F++YTVV +V + ++ L C T A
Sbjct: 85 ------------AYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQA 132
Query: 186 VWNTAKVEPG-SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
++ ++E G +I+ G G VG + AK AG RVI + F+ K+ G +
Sbjct: 133 LFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVI-TTCSKRNFEYVKSLGADHVI 190
Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
+ D D + + + ++T G GVD + +G
Sbjct: 191 DYNDED--VCERIKEITGGRGVDAVLDTVG 218
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 64.1 bits (157), Expect = 8e-12
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
KA V P V E +V PQ G+V +++ + + D G P IL
Sbjct: 2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAIL 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQ 96
G + AG+VE+VGEGVT + GD V C
Sbjct: 62 GCDVAGVVEAVGEGVTRFRVGDEVYGCAG 90
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 64.3 bits (157), Expect = 9e-12
Identities = 46/199 (23%), Positives = 74/199 (37%), Gaps = 45/199 (22%)
Query: 64 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
P +LGHE G + + ++ G V C CK+C S N C +R
Sbjct: 60 PMVLGHEVIGKIVHSDS--SGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMR------ 111
Query: 124 VMMNDRKSRFSINGKPIYHFMGTST--------FSQYTVVHDVSVAKIDPQAPLDKVCLL 175
F G++ F++Y VV +A +KV +
Sbjct: 112 -------------------FFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKAD-EKV--M 149
Query: 176 GCGVPTGLGAVWNTAKVEPGSI----VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231
P AV A + G + V V G+G +G + K GA+ ++ D+ P+
Sbjct: 150 AFAEPL---AVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRS 206
Query: 232 FDRAKNFGVTEFVNPKDHD 250
A+ G + VNP++ D
Sbjct: 207 LSLAREMGADKLVNPQNDD 225
|
Length = 343 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 63.8 bits (156), Expect = 1e-11
Identities = 60/268 (22%), Positives = 94/268 (35%), Gaps = 62/268 (23%)
Query: 25 EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCILGHEAAGIVESVGEG 81
+V + P+ GEV +K+ ++ D G L FP I G + AG V +VG G
Sbjct: 17 VEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSG 76
Query: 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
VT + GD V G+ G
Sbjct: 77 VTRFKVGDEVF---------------GRLPPKG--------------------------- 94
Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
G ++Y V + +AK + + L G+ T L A+ + KV+PG V +
Sbjct: 95 --GG--ALAEYVVAPESGLAKKPEGVSFEEAAALPVAGL-TALQALRDAGKVKPGQRVLI 149
Query: 201 FGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259
G G VG + AKA GA V G+ + + ++ G E ++ D +
Sbjct: 150 NGASGGVGTFAVQIAKALGA-HVTGVCS-TRNAELVRSLGADEVIDYTTED-----FVAL 202
Query: 260 LTDGGV-DYSFECIGNVSVMRAALECCH 286
G D F+ +GN +
Sbjct: 203 TAGGEKYDVIFDAVGNSP--FSLYRASL 228
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 63.0 bits (154), Expect = 2e-11
Identities = 69/287 (24%), Positives = 103/287 (35%), Gaps = 72/287 (25%)
Query: 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAA 72
A+ + L +ED+ P GE +++L +C+TD + G P FP + GHE
Sbjct: 3 ALVLDGGLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFV 59
Query: 73 GIVESVGEG-------VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
GIVE E V E+ C C++C+ G C
Sbjct: 60 GIVEEGPEAELVGKRVVGEI----------NIACGRCEYCRRGLYTHC------------ 97
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVV-----HDVSVAKIDPQA----PLDKVCLLG 176
++ I + F++Y + H V D QA PL +
Sbjct: 98 --PNRTVLGIVDRD-------GAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEIL 148
Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
VP + PG VAV G G +GL +A+ G V+ + +K A+
Sbjct: 149 EQVP-----------ITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALAR 196
Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
GV E V P + + GG D E G+ S + AL
Sbjct: 197 RLGV-ETVLPDE---------AESEGGGFDVVVEATGSPSGLELALR 233
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 3e-11
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTD------AYTWSGKDPEGLFP 64
KA + + D+ P GEV ++ L +C TD Y + P G
Sbjct: 2 KAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTA---PPGEDF 58
Query: 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC----GKVRGAT 120
+LGHEA G+VE VG+G + + PGD V+P + +C C+ G+ + C RG
Sbjct: 59 LVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIK 117
Query: 121 GA-GVM 125
G G M
Sbjct: 118 GLHGFM 123
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355 |
| >gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 62.5 bits (152), Expect = 4e-11
Identities = 58/211 (27%), Positives = 86/211 (40%), Gaps = 18/211 (8%)
Query: 36 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
+V IK+++ +CHTD + +P + GHE G V VG V++ GD V +
Sbjct: 36 DVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGV 95
Query: 95 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
C EC CKS C K + ND +GKP F+ V
Sbjct: 96 IVGCCGECSPCKSDLEQYCNKRIWS------YND----VYTDGKPT-----QGGFASAMV 140
Query: 155 VHDVSVAKI-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEG 213
V V KI + AP LL GV T + + + G + GLG VG +
Sbjct: 141 VDQKFVVKIPEGMAPEQAAPLLCAGV-TVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKI 199
Query: 214 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
AKA G + D K+ + ++ G +++
Sbjct: 200 AKAMGHHVTVISSSDKKREEALEHLGADDYL 230
|
Length = 357 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 60.4 bits (147), Expect = 2e-10
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 20 KPLVIEDVQVA--PPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAGI 74
PLV+E V + PP GEV +++L + +D T SG P P + G+E G+
Sbjct: 10 LPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPP--LPAVPGNEGVGV 67
Query: 75 VESVGEGVTEVQPGDHVIP 93
V VG GV+ + G V+P
Sbjct: 68 VVEVGSGVSGLLVGQRVLP 86
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 58.2 bits (142), Expect = 7e-10
Identities = 66/274 (24%), Positives = 98/274 (35%), Gaps = 69/274 (25%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
KA V EP P L + +V P GEV I++ + D G P G I
Sbjct: 2 KAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASD-I 60
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LG E AG+V +VG GVT + GD V C + G G
Sbjct: 61 LGLEVAGVVVAVGPGVTGWKVGDRV---------------------CALLAG--GG---- 93
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TG 182
+++Y VV + + L + +P T
Sbjct: 94 ----------------------YAEYVVVPAGQLLPVPEGLSLVE----AAALPEVFFTA 127
Query: 183 LGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
++ ++ G V + G G VG A + AKA GA RVI +K + + G
Sbjct: 128 WQNLFQLGGLKAGETVLIHG-GASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGA 185
Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
+N + D + + + T G GVD + +G
Sbjct: 186 DVAINYRTED--FAEEVKEATGGRGVDVILDMVG 217
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176252 cd08292, ETR_like_2, 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Score = 58.1 bits (141), Expect = 1e-09
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIV 75
+P L I +V P AGEV ++ + + + D +T G P I G EA G+V
Sbjct: 11 DPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVV 70
Query: 76 ESVGEGVTEVQPGDHV 91
++VGEGV +Q G V
Sbjct: 71 DAVGEGVKGLQVGQRV 86
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 3e-09
Identities = 57/218 (26%), Positives = 81/218 (37%), Gaps = 17/218 (7%)
Query: 36 EVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPC 94
+V +KILF +CH+D +T +P I GHE GI VG+ VT+ + GD V +
Sbjct: 33 DVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGV 92
Query: 95 YQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTV 154
C+ C+ C N C KV F+ N + +S V
Sbjct: 93 IIGSCQSCESCNQDLENYCPKV---------------VFTYNSRSSDGTRNQGGYSDVIV 137
Query: 155 VHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEG 213
V V I P D L C G+ + E G + V GLG +G +
Sbjct: 138 VDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKI 197
Query: 214 AKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251
KA G + K+ + G F+ D K
Sbjct: 198 GKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQK 235
|
Length = 375 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (130), Expect = 3e-08
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 21 PLVIEDVQVAP--PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78
P V++ V+ P P EV+++ + + D Y SG P P LG EAAG+V V
Sbjct: 13 PEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKV 72
Query: 79 GEGVTEVQPGDHVI 92
G GV ++ GD V+
Sbjct: 73 GSGVKHIKVGDRVV 86
|
Length = 327 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 52.2 bits (126), Expect = 8e-08
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--KDPEGLFPCILGHEAAGIVESVG 79
L +E + P +GEVR+++ L D G P + G E AG VE+VG
Sbjct: 14 LKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKP-PFVPGFECAGTVEAVG 72
Query: 80 EGVTEVQPGDHVI 92
EGV + + GD V+
Sbjct: 73 EGVKDFKVGDRVM 85
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVI 92
EV +++ L D G P LG E +GIV VG GVT ++ GD V+
Sbjct: 1 DEVEVEVKAAGLNFRDVLVALGLLPGD--ETPLGLECSGIVTRVGSGVTGLKVGDRVM 56
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 1e-07
Identities = 54/259 (20%), Positives = 83/259 (32%), Gaps = 62/259 (23%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVG 79
L I + P+ +V IK+ + D GK P G ILG E AG VE VG
Sbjct: 16 LKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSE-ILGLEVAGYVEDVG 74
Query: 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139
V + GD V+ + G
Sbjct: 75 SDVKRFKEGDRVM---------------------ALLPGG-------------------- 93
Query: 140 IYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TGLGAVWNTAKVEPG 195
+++Y V H V I ++ +P T + V+ G
Sbjct: 94 --------GYAEYAVAHKGHVMHIPQGYTFEE----AAAIPEAFLTAWQLLKKHGDVKKG 141
Query: 196 SIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254
V + G VG A A+ A+ GA+ +I +K D K + D +
Sbjct: 142 QSVLIHAGASGVGTAAAQLAEKYGAATIITTS-SEEKVDFCKKLAAIILIRYPDEEGFAP 200
Query: 255 QVLVDLTDGGVDYSFECIG 273
+V + GV+ +C+G
Sbjct: 201 KVKKLTGEKGVNLVLDCVG 219
|
Length = 334 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 2e-07
Identities = 65/273 (23%), Positives = 94/273 (34%), Gaps = 77/273 (28%)
Query: 24 IEDVQVAPPQAGEVRIKILFTALCHTDAYT--WSGKDPEGLFPCILGHEAAGIVESVGEG 81
+E+V V P G+V ++ L+ +L D Y P P LG G V +
Sbjct: 29 LEEVDVPEPGEGQVLLRTLYLSL---DPYMRGRMSDAPSYAPPVELGEVMVGGT--VAKV 83
Query: 82 V----TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSING 137
V QPGD V+
Sbjct: 84 VASNHPGFQPGDIVV--------------------------------------------- 98
Query: 138 KPIYHFMGTSTFSQYTVVHDVSVAKIDP-QAPL-DKVCLLGCGVPTGLGA---VWNTAKV 192
G S + +Y + + K+DP APL + +LG GL A + + +
Sbjct: 99 -------GVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLG---MPGLTAYFGLLDIGQP 148
Query: 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHD 250
+ G V V G VG V + AK G RV+GI +K D G ++ K D
Sbjct: 149 KAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKAED 207
Query: 251 KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALE 283
Q L + G+D FE +G V+ A L
Sbjct: 208 --FAQALKEACPKGIDVYFENVGGE-VLDAVLP 237
|
Length = 340 |
| >gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Score = 50.2 bits (121), Expect = 4e-07
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 11 KAAVAWEPNK---PLVIEDVQVAPPQAG--EVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
KA +P P + D+++ P G ++ +++ ++ D +G P P
Sbjct: 2 KAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPK 61
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHV 91
ILG +A+G+VE+VG VT + GD V
Sbjct: 62 ILGWDASGVVEAVGSEVTLFKVGDEV 87
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336 |
| >gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 7e-07
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVES 77
PL + V P GE+ +++ +C TD + G P + P GHE G V
Sbjct: 14 PLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTP---GHEVVGEVAG 70
Query: 78 VGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVR 117
G GD V I + C C++C+ G NLC R
Sbjct: 71 RGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASR 111
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 8e-07
Identities = 66/253 (26%), Positives = 93/253 (36%), Gaps = 59/253 (23%)
Query: 24 IEDVQVAPPQAGEVRIKILFTALCHTDA-YTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82
I DV V P GEV +K F + +D +T DP P G E G V +VGEGV
Sbjct: 20 IVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGV 79
Query: 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYH 142
T+ + GD V
Sbjct: 80 TDFKVGDAVA-------------------------------------------------- 89
Query: 143 FMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 202
M F++Y VV + P+ + + LL G+ T A+ +++ G V V
Sbjct: 90 TMSFGAFAEYQVVPARHAVPV-PELKPEVLPLLVSGL-TASIALEEVGEMKSGETVLVTA 147
Query: 203 L--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260
GT AV + AK AG VIG +K + K+ G +N K D + +VL
Sbjct: 148 AAGGTGQFAV-QLAKLAG-CHVIGTCSSDEKAEFLKSLGCDRPINYKTED--LGEVLKKE 203
Query: 261 TDGGVDYSFECIG 273
GVD +E +G
Sbjct: 204 YPKGVDVVYESVG 216
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 16 WEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDP-----EGLFPCILGH 69
EP + L +E ++ PP EV +K+L + D G P P + G+
Sbjct: 10 GEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGN 69
Query: 70 EAAGIVESVGEGVTEVQPGDHVIP 93
E G V VG GV ++PGD VIP
Sbjct: 70 EGVGEVVKVGSGVKSLKPGDWVIP 93
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 48.2 bits (116), Expect = 2e-06
Identities = 59/265 (22%), Positives = 88/265 (33%), Gaps = 74/265 (27%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY--TWSGKDPEGLFPCILGH--EAAGI--- 74
+ +V + + GEV ++ L+ ++ D Y W P LG G+
Sbjct: 20 FELVEVPLPELKDGEVLVRTLYLSV---DPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEV 76
Query: 75 VESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS 134
VES + GD V
Sbjct: 77 VESRSPD---FKVGDLV------------------------------------------- 90
Query: 135 INGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLG-CGVP--TGLGAVWNTA 190
F+G + +Y VV S + K+DP L LG G+ T +
Sbjct: 91 ------SGFLG---WQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIG 141
Query: 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKD 248
K +PG V V G VG V + AK GA RV+GI +K G +N K
Sbjct: 142 KPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLVEELGFDAAINYKT 200
Query: 249 HDKPIQQVLVDLTDGGVDYSFECIG 273
D + + L + G+D F+ +G
Sbjct: 201 PD--LAEALKEAAPDGIDVYFDNVG 223
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 4e-06
Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 28 QVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86
+VAPP GEVRI++ +L D G P +P G EA+G+V +VG VT +
Sbjct: 1 EVAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLA 60
Query: 87 PGDHVI 92
GD VI
Sbjct: 61 VGDEVI 66
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC----------- 65
+P + + +EDV V GEV + ++ + + + + G+ P F
Sbjct: 25 DPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGE-PVSTFAARQRRGRDEPYH 83
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVI 92
I G +A+GIV +VGEGV + GD V+
Sbjct: 84 IGGSDASGIVWAVGEGVKNWKVGDEVV 110
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 45.9 bits (109), Expect = 1e-05
Identities = 44/194 (22%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
I+G +A+G+V VG GVT + GD V+ C Q + + G L + R
Sbjct: 80 IIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPD-GRDGDPMLSSEQR------- 131
Query: 125 MMNDRKSRFSINGKPIYHFMGT-STFSQYTVVHDVSVAKIDPQAPL----DKVCLLGCGV 179
I+ + +F+++ +V D ++ P+ + C G
Sbjct: 132 ---------------IWGYETNFGSFAEFALVKD---YQLMPKPKHLTWEEAACPGLTG- 172
Query: 180 PTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
T + WN A V+PG V ++G G +G + A+A G + V + P+K + +
Sbjct: 173 ATAYRQLVGWNPAAVKPGDNVLIWGAAGGLGSYATQLARAGGGNPV-AVVSSPEKAEYCR 231
Query: 237 NFGVTEFVNPKDHD 250
+ G ++ D
Sbjct: 232 SLGAEAVIDRNDFG 245
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAY----TWSGKDPEGLFPCILGHEAAGIVES 77
L + + + P AGEV +K+ + + D + + P P G++ G V++
Sbjct: 15 LKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPP---LPFTPGYDLVGRVDA 71
Query: 78 VGEGVTEVQPGDHVI 92
+G GVT + GD V
Sbjct: 72 LGSGVTGFEVGDRVA 86
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 43.5 bits (104), Expect = 6e-05
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVI 92
LG E AG+V VG GVT + GD V+
Sbjct: 26 LGGECAGVVTRVGPGVTGLAVGDRVM 51
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 8e-05
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 13 AVAWEPNKPL----VIEDVQVAPPQAGE--VRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
AV ++ P+ + D+ + P+ G + +++ ++ D + PE P I
Sbjct: 2 AVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKI 61
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV 91
LG +AAG+V +VG+ VT +PGD V
Sbjct: 62 LGWDAAGVVVAVGDEVTLFKPGDEV 86
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336 |
| >gnl|CDD|176209 cd08247, AST1_like, AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 1e-04
Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 143 FMGTSTFSQYTVV---HDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-----AKVE 193
+ G T SQY +V D S+ + L++ P LG + K+
Sbjct: 95 YGGQGTLSQYLLVDPKKDKKSITRKPENISLEE----AAAWPLVLGTAYQILEDLGQKLG 150
Query: 194 PGSIVAVFGLGT-VGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD- 250
P S V V G T VG + AK V+G + + K G F++ H
Sbjct: 151 PDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGT-CSSRSAELNKKLGADHFIDYDAHSG 209
Query: 251 -KPIQQVLVDLTDGG-VDYSFECIGN 274
K ++ VL ++ G D +C+G
Sbjct: 210 VKLLKPVLENVKGQGKFDLILDCVGG 235
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 352 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 41.5 bits (98), Expect = 3e-04
Identities = 34/85 (40%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
KA EP P V+ V+V P AGEV I++ + D +GK P G I
Sbjct: 2 KAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASD-I 60
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV 91
LG E AG V +VGEGV+ + GD V
Sbjct: 61 LGLEVAGEVVAVGEGVSRWKVGDRV 85
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 6e-04
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 176 GCGVPTGLGA----VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231
GV G+ A + T +E G VAV GLG VG +AE GA ++I DI+ +
Sbjct: 6 AYGVFLGMKAAAEHLLGTDSLE-GKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEA 63
Query: 232 FDRA-KNFGVT 241
RA + FG T
Sbjct: 64 VARAAELFGAT 74
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200 |
| >gnl|CDD|216949 pfam02254, TrkA_N, TrkA-N domain | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 6e-04
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
+ + G G VG ++AE + G V+ ID DP++ + + GV
Sbjct: 1 IIIIGYGRVGRSLAEELREGG-PDVVVIDKDPERVEELREEGVP 43
|
This domain is found in a wide variety of proteins. These protein include potassium channels, phosphoesterases, and various other transporters. This domain binds to NAD. Length = 116 |
| >gnl|CDD|234094 TIGR03026, NDP-sugDHase, nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 8e-04
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246
+AV GLG VGL +A G V G+DID +K D+ G + P
Sbjct: 3 IAVIGLGYVGLPLAALLADLGHD-VTGVDIDQEKVDKLNK-GKSPIYEP 49
|
Enzymes in this family catalyze the NAD-dependent alcohol-to-acid oxidation of nucleotide-linked sugars. Examples include UDP-glucose 6-dehydrogenase (1.1.1.22) , GDP-mannose 6-dehydrogenase (1.1.1.132) , UDP-N-acetylglucosamine 6-dehydrogenase (1.1.1.136), UDP-N-acetyl-D-galactosaminuronic acid dehydrogenase and UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase. These enzymes are most often involved in the biosynthesis of polysaccharides and are often found in operons devoted to that purpose. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. Length = 409 |
| >gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 20 KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESV 78
K L + + +V P GEV IK+ + +D G+ P G E +G V +
Sbjct: 16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAA 75
Query: 79 GEGV 82
G G
Sbjct: 76 GGGP 79
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|223749 COG0677, WecC, UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.002
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
+ V GLG VGL +A A A+ +VIG+DI+ KK D+
Sbjct: 12 IGVIGLGYVGLPLA-AAFASAGFKVIGVDINQKKVDKLNR 50
|
Length = 436 |
| >gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 58/258 (22%), Positives = 95/258 (36%), Gaps = 62/258 (24%)
Query: 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCH-TDAYTWSGK---DPEGLFPCILG 68
A+ + + +V + PP G++ ++I ++ + T+ W+G P +P + G
Sbjct: 4 AIVLSGPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPG 63
Query: 69 HEAAGIVESVGEGVTEVQPGDHV-IP---CYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
+E+ G V G +PGD V +P CY VRG G
Sbjct: 64 YESVGRVVEAGPDTGF-RPGDRVFVPGSNCY------------------EDVRGLFGGA- 103
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
S+ V V ++DP L L T
Sbjct: 104 -------------------------SKRLVTPASRVCRLDPA--LGPQGALLALAATARH 136
Query: 185 AV-WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
AV KV P IV G GT+G +A KAAG S + +P++ D A + V
Sbjct: 137 AVAGAEVKVLPDLIV---GHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYEV--- 190
Query: 244 VNPKDHDKPIQQVLVDLT 261
++P+ + + + D +
Sbjct: 191 LDPEKDPRRDYRAIYDAS 208
|
[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 58/246 (23%), Positives = 85/246 (34%), Gaps = 64/246 (26%)
Query: 25 EDVQVAPPQAGEVRIKILFTALCHTDAYT---WSGKD----------------PEGL-FP 64
+DV V P GEV I++ + +TD T W + L FP
Sbjct: 19 DDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFP 78
Query: 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
I G + G V +VGEGV + G+ V+ +R
Sbjct: 79 RIQGADIVGRVVAVGEGVDTARIGERVL---------VDPS----------IRDPPEDDP 119
Query: 125 MMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGV 179
D ++G+ F++YTVV + ++ PL V L C
Sbjct: 120 ADID--------------YIGSERDGGFAEYTVVPAENAYPVNS--PLSDVELATFPCSY 163
Query: 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
T + A V G V V G G VG A+ + AK GA VI + K + +
Sbjct: 164 STAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV-AGAAKEEAVRAL 220
Query: 239 GVTEFV 244
G +
Sbjct: 221 GADTVI 226
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 37.9 bits (89), Expect = 0.004
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCILGHEAAGIVESV 78
L + + + G+V I++ +++L + DA +G G+ +P G +AAG V S
Sbjct: 15 LFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGN--GGVTRNYPHTPGIDAAGTVVSS 72
Query: 79 GEGVTEVQPGDHVI 92
+ GD V+
Sbjct: 73 --DDPRFREGDEVL 84
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|222236 pfam13578, Methyltransf_24, Methyltransferase domain | Back alignment and domain information |
|---|
Score = 35.7 bits (83), Expect = 0.004
Identities = 16/64 (25%), Positives = 25/64 (39%), Gaps = 4/64 (6%)
Query: 208 LAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 265
L +A+ K G R+ ID P + + G+ + V + L L DG +
Sbjct: 12 LWLAQALKDNGLGRLYSIDPWPGAEAGANLRKAGLADRVRL--LRGDSLEALARLPDGSI 69
Query: 266 DYSF 269
D F
Sbjct: 70 DLLF 73
|
This family appears to be a methyltransferase domain. Length = 105 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 291 | |||
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 99.98 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 99.98 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 99.97 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 99.97 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 99.97 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 99.97 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 99.97 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 99.97 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 99.97 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 99.97 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 99.97 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 99.97 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 99.97 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 99.97 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 99.97 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 99.97 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 99.96 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 99.96 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 99.96 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 99.96 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 99.96 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 99.96 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 99.96 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 99.95 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 99.95 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 99.95 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 99.95 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 99.95 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 99.95 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 99.94 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 99.94 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 99.94 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 99.93 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.88 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.87 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 99.87 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 99.82 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.46 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.0 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 98.64 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.36 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.12 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 98.0 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 97.98 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 97.98 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.91 | |
| PLN02494 | 477 | adenosylhomocysteinase | 97.88 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 97.81 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.78 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 97.75 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.73 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.58 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 97.57 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.54 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.54 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.54 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 97.51 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 97.38 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 97.32 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.29 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.28 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.27 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.21 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 97.14 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.03 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 97.02 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.02 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.95 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 96.95 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 96.94 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 96.9 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 96.88 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 96.86 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.83 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.81 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 96.81 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 96.78 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.75 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 96.75 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 96.74 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.73 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.7 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 96.68 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 96.65 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 96.64 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 96.62 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 96.62 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 96.61 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 96.61 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.6 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 96.59 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 96.58 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.58 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 96.58 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 96.56 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.53 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 96.52 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 96.49 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 96.49 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.48 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.47 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 96.46 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 96.43 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 96.43 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 96.42 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 96.38 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.38 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 96.35 | |
| TIGR01318 | 467 | gltD_gamma_fam glutamate synthase small subunit fa | 96.33 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.32 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.32 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 96.31 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 96.31 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.29 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 96.29 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.27 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 96.27 | |
| PRK12809 | 639 | putative oxidoreductase Fe-S binding subunit; Revi | 96.26 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 96.25 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 96.25 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 96.24 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 96.24 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.23 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 96.23 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 96.22 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 96.21 | |
| PRK00536 | 262 | speE spermidine synthase; Provisional | 96.2 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 96.2 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.2 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 96.18 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 96.17 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.17 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.17 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 96.16 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 96.15 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 96.11 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 96.11 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 96.11 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 96.1 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.09 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 96.08 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.08 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.07 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 96.07 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 96.05 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 96.05 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 96.05 | |
| PRK08643 | 256 | acetoin reductase; Validated | 96.04 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 96.03 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 96.02 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 96.02 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 96.01 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 95.99 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.99 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 95.99 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 95.98 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 95.98 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 95.97 | |
| PRK12769 | 654 | putative oxidoreductase Fe-S binding subunit; Revi | 95.97 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 95.96 | |
| PRK05717 | 255 | oxidoreductase; Validated | 95.95 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.95 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 95.94 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 95.93 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 95.92 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 95.92 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 95.92 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 95.92 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 95.92 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 95.92 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 95.91 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 95.91 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 95.9 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 95.89 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.88 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 95.88 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.88 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.86 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 95.86 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 95.86 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 95.86 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 95.86 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.85 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 95.85 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 95.85 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 95.82 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 95.82 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 95.82 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 95.81 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 95.81 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 95.8 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 95.8 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 95.79 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 95.79 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 95.79 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 95.78 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 95.76 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 95.75 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 95.75 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 95.74 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 95.74 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 95.71 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 95.71 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 95.71 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 95.71 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 95.7 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 95.69 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 95.69 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 95.68 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 95.68 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 95.68 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 95.66 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 95.66 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 95.66 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 95.66 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 95.66 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 95.64 | |
| PRK14967 | 223 | putative methyltransferase; Provisional | 95.63 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 95.63 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 95.62 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 95.62 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 95.62 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 95.62 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 95.61 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 95.61 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 95.58 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.58 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 95.57 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.57 | |
| PF02558 | 151 | ApbA: Ketopantoate reductase PanE/ApbA; InterPro: | 95.56 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.55 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 95.54 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 95.53 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.51 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 95.51 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 95.51 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 95.51 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 95.5 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 95.5 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.49 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.48 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.48 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 95.45 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 95.45 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 95.45 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 95.45 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 95.44 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 95.43 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 95.42 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 95.4 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 95.4 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.39 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 95.38 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 95.37 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 95.35 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 95.32 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 95.31 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 95.3 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.3 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 95.29 | |
| PLN02366 | 308 | spermidine synthase | 95.29 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 95.28 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 95.28 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 95.24 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 95.22 | |
| TIGR03215 | 285 | ac_ald_DH_ac acetaldehyde dehydrogenase (acetylati | 95.22 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 95.19 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 95.19 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.18 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 95.16 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 95.16 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 95.15 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 95.14 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 95.14 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.11 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 95.1 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.09 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 95.08 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 95.07 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 94.99 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 94.99 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 94.98 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 94.96 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.96 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 94.94 | |
| PF01408 | 120 | GFO_IDH_MocA: Oxidoreductase family, NAD-binding R | 94.87 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 94.87 | |
| COG0421 | 282 | SpeE Spermidine synthase [Amino acid transport and | 94.86 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 94.86 | |
| PRK01438 | 480 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 94.85 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 94.84 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 94.83 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.82 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 94.81 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 94.81 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 94.81 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 94.81 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.81 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 94.78 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 94.75 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 94.74 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 94.71 | |
| PRK01683 | 258 | trans-aconitate 2-methyltransferase; Provisional | 94.69 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 94.68 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.67 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.66 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 94.66 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 94.66 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 94.65 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 94.64 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 94.64 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 94.63 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 94.62 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 94.61 | |
| PRK08300 | 302 | acetaldehyde dehydrogenase; Validated | 94.6 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 94.59 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.57 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 94.54 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 94.5 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 94.5 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 94.5 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.47 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 94.47 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 94.44 | |
| PLN02476 | 278 | O-methyltransferase | 94.44 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 94.4 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 94.38 | |
| PRK08223 | 287 | hypothetical protein; Validated | 94.38 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 94.34 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 94.32 | |
| COG0031 | 300 | CysK Cysteine synthase [Amino acid transport and m | 94.31 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 94.3 | |
| PLN02823 | 336 | spermine synthase | 94.28 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 94.27 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.24 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 94.23 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 94.21 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 94.2 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 94.17 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 94.16 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 94.15 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 94.15 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 94.13 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 94.11 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 94.09 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 94.07 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 94.06 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 94.03 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 94.03 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 94.0 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 93.94 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.92 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 93.91 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 93.89 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 93.87 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 93.87 | |
| PRK13984 | 604 | putative oxidoreductase; Provisional | 93.86 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.82 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 93.82 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 93.79 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 93.77 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 93.75 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 93.74 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 93.73 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 93.64 | |
| TIGR00417 | 270 | speE spermidine synthase. the SpeE subunit of sper | 93.59 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 93.59 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.59 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 93.52 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 93.5 | |
| PRK12814 | 652 | putative NADPH-dependent glutamate synthase small | 93.5 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 93.48 | |
| PRK14103 | 255 | trans-aconitate 2-methyltransferase; Provisional | 93.46 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 93.44 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 93.42 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 93.41 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 93.36 | |
| PRK05708 | 305 | 2-dehydropantoate 2-reductase; Provisional | 93.36 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 93.35 | |
| COG1893 | 307 | ApbA Ketopantoate reductase [Coenzyme metabolism] | 93.32 | |
| cd05211 | 217 | NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of | 93.32 | |
| PLN03013 | 429 | cysteine synthase | 93.31 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 93.29 | |
| PLN02735 | 1102 | carbamoyl-phosphate synthase | 93.28 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 93.26 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 93.25 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 93.24 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 93.22 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 93.19 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 93.17 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 93.1 | |
| PRK13403 | 335 | ketol-acid reductoisomerase; Provisional | 93.1 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 93.09 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 93.07 | |
| PRK14806 | 735 | bifunctional cyclohexadienyl dehydrogenase/ 3-phos | 93.07 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 93.06 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 93.06 | |
| PRK07411 | 390 | hypothetical protein; Validated | 93.03 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 93.03 | |
| PRK04266 | 226 | fibrillarin; Provisional | 93.03 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 93.01 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 92.99 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 92.96 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 92.95 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 92.93 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 92.9 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 92.9 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 92.89 |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-56 Score=379.11 Aligned_cols=284 Identities=77% Similarity=1.284 Sum_probs=274.8
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+++++||++.+++++||.++|++.++|+.+||+||++++++||+|...|+|..+...+|.++|||.+|+|+++|+.|++
T Consensus 3 gkvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~ 82 (375)
T KOG0022|consen 3 GKVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTT 82 (375)
T ss_pred CCceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCccc
Confidence 46789999999999999999999999999999999999999999999999999877789999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+.....+|++|.+|.+++.|+|.......+.+.+.+||.+|+.-+|+.+|+|+++.+|+||.+++...+++|+
T Consensus 83 vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId 162 (375)
T KOG0022|consen 83 VKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID 162 (375)
T ss_pred cCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence 99999999999999999999999999999999999888999889999999999999999999999999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+..+++.++++.|..+|+|.|....++++||+++.|+|.|.+|+++++-||+.|+++||++|-+++|.+.+++||+++.+
T Consensus 163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~i 242 (375)
T KOG0022|consen 163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFI 242 (375)
T ss_pred CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|.++....+++.+.+.|++|+|+-|||+|+.+++.+++.+.+.+
T Consensus 243 Np~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~G 286 (375)
T KOG0022|consen 243 NPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKG 286 (375)
T ss_pred ChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcC
Confidence 99865557999999999999999999999999999999998876
|
|
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-55 Score=382.52 Aligned_cols=280 Identities=63% Similarity=1.091 Sum_probs=269.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
+++||++.+++++||+++|++++.|++||||||+.++|+||+|..+++|..+.. +|.++|||++|+|+++|+.|+.++|
T Consensus 1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp 79 (366)
T COG1062 1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP 79 (366)
T ss_pred CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence 578999999999999999999999999999999999999999999999998887 9999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+...|+.|.+|.++++++|.......+.|.+ .||.+|++.++.+++++++.++|++|..++...+++++++.
T Consensus 80 GDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m-~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 80 GDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTM-PDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCEEEEcccCCCCCCchhhCCCcccccchhhhcccccc-cCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 99999999999999999999999999998888888866 99999999999999999999999999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+++.++++.|...|.+.+..+.+++++|+++.|+|.|++|++++|-|+..|+.+|+++|.+++|++++++||+++++|.+
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~ 238 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPK 238 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+.. +..+.+.+++++|+|.+|||+|+...++++++++.++ |+
T Consensus 239 ~~~-~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~-G~ 280 (366)
T COG1062 239 EVD-DVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRG-GT 280 (366)
T ss_pred hhh-hHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcC-Ce
Confidence 632 6889999999999999999999999999999999997 53
|
|
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-55 Score=389.33 Aligned_cols=253 Identities=36% Similarity=0.539 Sum_probs=235.4
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
+++|||+++.+++++++++|++.|.|+++||||+|+++|+||+|++.++|.++...+|+++|||.+|+|+++|+.|+.|+
T Consensus 1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence 46899999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred CCCEEee-cCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 87 PGDHVIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 87 ~Gd~V~~-~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
+||||.+ +...+|+.|.+|++|+.++|++... .|++ .+| +|+||+.++.+++++||+
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~---~gy~-~~G------------------Gyaeyv~v~~~~~~~iP~ 138 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKI---TGYT-TDG------------------GYAEYVVVPARYVVKIPE 138 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccc---ccee-ecC------------------cceeEEEEchHHeEECCC
Confidence 9999988 8889999999999999999999665 5555 444 999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
++|++.||.+.|+..|.|+++ +...++||++|+|.|.|++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 139 ~~d~~~aApllCaGiT~y~al-k~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga-~Via~~~~~~K~e~a~~lGAd~~i~ 216 (339)
T COG1064 139 GLDLAEAAPLLCAGITTYRAL-KKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA-EVIAITRSEEKLELAKKLGADHVIN 216 (339)
T ss_pred CCChhhhhhhhcCeeeEeeeh-hhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEeCChHHHHHHHHhCCcEEEE
Confidence 999999999999999999987 45999999999999999999999999999997 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
..+ ++..+.+.+. +|+++|+++ +.+++.++++|+++ |+
T Consensus 217 ~~~--~~~~~~~~~~----~d~ii~tv~-~~~~~~~l~~l~~~-G~ 254 (339)
T COG1064 217 SSD--SDALEAVKEI----ADAIIDTVG-PATLEPSLKALRRG-GT 254 (339)
T ss_pred cCC--chhhHHhHhh----CcEEEECCC-hhhHHHHHHHHhcC-CE
Confidence 763 5555666553 999999999 89999999999999 53
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=335.27 Aligned_cols=270 Identities=30% Similarity=0.455 Sum_probs=237.9
Q ss_pred CCCCCcccceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEe
Q 022865 1 MSTEGQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~ 78 (291)
|+++..|.+++++.+..++. ++++.+++.|+|+++||+|++++|||||+|++.|.+.++..++|.++|||.+|+|+++
T Consensus 1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv 80 (360)
T KOG0023|consen 1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV 80 (360)
T ss_pred CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence 67778899999999999988 5677999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCEEe-ecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 79 GEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 79 G~~~~~~~~Gd~V~-~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
|++|+.|++||+|- .+....|.+|.+|.++..+.|++.... .+|...++..++|+|++|++++.
T Consensus 81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t---------------~~g~~~DGt~~~ggf~~~~~v~~ 145 (360)
T KOG0023|consen 81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFT---------------YNGVYHDGTITQGGFQEYAVVDE 145 (360)
T ss_pred CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEe---------------ccccccCCCCccCccceeEEEee
Confidence 99999999999994 445578999999999999999954332 12222333777889999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK 236 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~~ 236 (291)
.++++||++++++.||.++|+..|+|.+| ....+.||+++.|.|+|++|.+++|+||+||. +|+++++++ +|.+..+
T Consensus 146 ~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aVq~AKAMG~-rV~vis~~~~kkeea~~ 223 (360)
T KOG0023|consen 146 VFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAVQYAKAMGM-RVTVISTSSKKKEEAIK 223 (360)
T ss_pred eeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHHHHHHHhCc-EEEEEeCCchhHHHHHH
Confidence 99999999999999999999999999987 66778899999999997799999999999999 999999998 5666667
Q ss_pred hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 237 ~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
.+||+.+++... ++++.+.+.+.+++++|-|.+. .+..+..++.+|+.+ |+
T Consensus 224 ~LGAd~fv~~~~-d~d~~~~~~~~~dg~~~~v~~~--a~~~~~~~~~~lk~~-Gt 274 (360)
T KOG0023|consen 224 SLGADVFVDSTE-DPDIMKAIMKTTDGGIDTVSNL--AEHALEPLLGLLKVN-GT 274 (360)
T ss_pred hcCcceeEEecC-CHHHHHHHHHhhcCcceeeeec--cccchHHHHHHhhcC-CE
Confidence 799999888763 3788889999888888888877 556699999999998 53
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-48 Score=333.24 Aligned_cols=258 Identities=28% Similarity=0.414 Sum_probs=231.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCC---CCCCcccccceeEEEEEeCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
..++|+++.++++ +++++.|.|++ .|+||+|+++++|||++|+++|...... .+.|.++|||.+|+|+++|+.|+
T Consensus 3 ~~~~A~vl~g~~d-i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 3 ADNLALVLRGKGD-IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cccceeEEEccCc-eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 3689999999987 99999999986 9999999999999999999999766532 26899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
++++||||++.+..+|..|.+|++|+.|+|++..+ .+....+| ++++|++.++++++++
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f---~atpp~~G------------------~la~y~~~~~dfc~KL 140 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVF---CATPPVDG------------------TLAEYYVHPADFCYKL 140 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCcccc---ccCCCcCC------------------ceEEEEEechHheeeC
Confidence 99999999999999999999999999999999877 33444556 9999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
|+++|++++|++. +++++|+|. +++.+++|++|||+|+|++|+++...||++|+++|+.++..+.|++++++||++.+
T Consensus 141 Pd~vs~eeGAl~e-PLsV~~HAc-r~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~ 218 (354)
T KOG0024|consen 141 PDNVSFEEGALIE-PLSVGVHAC-RRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVT 218 (354)
T ss_pred CCCCchhhccccc-chhhhhhhh-hhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEE
Confidence 9999999999887 799999976 88999999999999999999999999999999999999999999999999999888
Q ss_pred eCCCCCC--chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 244 VNPKDHD--KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 244 i~~~~~~--~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+..... +.+.+.+....+. .+|++|||+|...+++.++.+++.+|
T Consensus 219 ~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gG 267 (354)
T KOG0024|consen 219 DPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGG 267 (354)
T ss_pred eeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCC
Confidence 7665433 3444555555554 69999999999999999999999983
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-46 Score=340.57 Aligned_cols=281 Identities=67% Similarity=1.145 Sum_probs=239.9
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
.|||+++...+++++++++|.|.|.++||+|||+++++|++|++++.|..+...+|.++|||++|+|+++|+.+++|++|
T Consensus 1 ~~~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~G 80 (368)
T TIGR02818 1 KSRAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVG 80 (368)
T ss_pred CceEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCC
Confidence 38999999988889999999999999999999999999999999998876555679999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..++.++|.+.......|+. .+|..++..+|...+++.+.|+|+||+.++.+.++++|++++
T Consensus 81 drV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~ 159 (368)
T TIGR02818 81 DHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM-PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAP 159 (368)
T ss_pred CEEEEcCCCCCCCChhhhCCCcccccCcccccccccc-cCCccccccCCCcccccccCccceeeEEechhheEECCCCCC
Confidence 9999988899999999999999999986543333332 222222222232222222357999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+++++.|+|+++....+++++++|||+|+|++|++++|+||++|+.+|++++.+++|+++++++|++.++++.+
T Consensus 160 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~ 239 (368)
T TIGR02818 160 LEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND 239 (368)
T ss_pred HHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc
Confidence 99999999999999998877888999999999999999999999999999977999999999999999999999998764
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
...++.+.+.+++++++|++|||+|++..+..+++++++++|
T Consensus 240 ~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G 281 (368)
T TIGR02818 240 YDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWG 281 (368)
T ss_pred cchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCC
Confidence 334566777777766899999999998889999999988634
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-45 Score=334.92 Aligned_cols=282 Identities=79% Similarity=1.286 Sum_probs=242.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++...+++++++++|.|.|+++||+||++++++|++|+.++.+..+...+|.++|||++|+|+++|+.+++|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~v 80 (368)
T cd08300 1 ITCKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKP 80 (368)
T ss_pred CcceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCC
Confidence 36899999988888999999999999999999999999999999999887655568999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|++.+..+|+.|.+|+.++.+.|.+.......|.. .+|..++..+|.+.+++...|+|+||+.++.+.++++|+++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLM-PDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCcccccccccc-CCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 99999988899999999999999999876432222222 22222233334444444456799999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++++.|+|+++.+..+++++++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~ 239 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPK 239 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEccc
Confidence 99999999999999999887778899999999999999999999999999997799999999999999999999999877
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+.++++.+.+.+++++++|+|||++|++..+..+++++++++|
T Consensus 240 ~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G 282 (368)
T cd08300 240 DHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWG 282 (368)
T ss_pred ccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCC
Confidence 5333577778888777899999999998889999999987634
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-45 Score=336.04 Aligned_cols=285 Identities=59% Similarity=1.089 Sum_probs=238.1
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
++++|||+++.++++++.+++++.|.|+++||+|||+++|||++|++++.|..+ ...+|.++|||++|+|+++|++++.
T Consensus 7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 86 (381)
T PLN02740 7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED 86 (381)
T ss_pred cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence 568999999999987799999999999999999999999999999999988753 2357899999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCcccccc--CCCceecccCCcceeeeEEecccceEE
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSI--NGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
|++||+|++.+..+|+.|.+|..+..+.|++.....-.+....+|..++.. .+...+.+...|+|+||+.++.+.+++
T Consensus 87 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~ 166 (381)
T PLN02740 87 LKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVK 166 (381)
T ss_pred CCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEE
Confidence 999999999999999999999999999999864311000000011110000 011112223457999999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+|+++++++++.+.+++.|+|+++.+..+++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|++.
T Consensus 167 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~ 246 (381)
T PLN02740 167 IDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITD 246 (381)
T ss_pred CCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcE
Confidence 99999999999999999999998777789999999999999999999999999999967999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
++++++...++.+.+.+++++++|+|||++|.+..+..+++++++++|
T Consensus 247 ~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G 294 (381)
T PLN02740 247 FINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWG 294 (381)
T ss_pred EEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCC
Confidence 998765333577778887766899999999998889999999988633
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-44 Score=332.58 Aligned_cols=283 Identities=70% Similarity=1.205 Sum_probs=242.8
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++...++++++++++.|.|+++||+||+.+++||++|+.++.|..+...+|.++|||++|+|+++|+.+++|++
T Consensus 1 ~~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~ 80 (369)
T cd08301 1 ITCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKP 80 (369)
T ss_pred CccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCcccc
Confidence 47999999998888999999999999999999999999999999999887655567899999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+..+|+.|.+|..++.+.|.+.......|....++..++...|...+++...|+|++|+.++...++++|+++
T Consensus 81 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~ 160 (369)
T cd08301 81 GDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA 160 (369)
T ss_pred CCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence 99999998899999999999999999986543222332222223333334444444556799999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++++++.+.|+|+++....+++++++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++.+++++
T Consensus 161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~ 240 (369)
T cd08301 161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPK 240 (369)
T ss_pred CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEccc
Confidence 99999999989999999887778899999999999999999999999999987799999999999999999999998876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
..+.++.+.+++++++++|++||++|....+..+++++++++|
T Consensus 241 ~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g 283 (369)
T cd08301 241 DHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWG 283 (369)
T ss_pred ccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCC
Confidence 5334566777777766899999999998889999999998524
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-44 Score=330.40 Aligned_cols=276 Identities=44% Similarity=0.746 Sum_probs=232.8
Q ss_pred eeEEEEecCC--------CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 10 CKAAVAWEPN--------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 10 ~~a~~~~~~~--------~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
|||+++.++| +.+++++++.|.|+++||+|||.+++||++|++++.|..+ ..+|.++|||++|+|+++|+.
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG 79 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence 7899999876 3489999999999999999999999999999999988653 357899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
+++|++||+|++.+...|+.|..|+.++.++|.+.......|.. .+|..++..++..+....+.|+|++|+.++.+.++
T Consensus 80 v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 80 VTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTL-LSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCcCCCCCEEEEccCCCCCCCccccCCCcccccCcccccccccc-ccCcccccccCcccccccCcccceeeEEecccceE
Confidence 99999999999888889999999999999999876432222221 11111111111111111223699999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
++|+++++++++.++++..|+|+++....+++++++|||+|+|++|++++|+|+++|+++|++++.+++|+++++++|++
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~ 238 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGAT 238 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999887788899999999999999999999999999997799999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.++++.+ .++.+.+.+++++++|+||||+|....+..++++++++|
T Consensus 239 ~~i~~~~--~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G 284 (371)
T cd08281 239 ATVNAGD--PNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGG 284 (371)
T ss_pred eEeCCCc--hhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCC
Confidence 9998765 567777888776689999999999888999999999983
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-43 Score=322.19 Aligned_cols=270 Identities=39% Similarity=0.629 Sum_probs=232.4
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
+|||+++.++++++++++++.|.|+++||+|||.++++|++|++++.|..+ ..+|.++|||++|+|+++|+.+++|++|
T Consensus 1 ~mka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (358)
T TIGR03451 1 TVRGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPG 79 (358)
T ss_pred CcEEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCC
Confidence 599999999998899999999999999999999999999999999888653 2478999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..++.++|........ .....+| .........|+|+||+.++.+.++++|++++
T Consensus 80 drV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~-~~~~~~g--------~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~ 150 (358)
T TIGR03451 80 DYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQ-KMTLTDG--------TELSPALGIGAFAEKTLVHAGQCTKVDPAAD 150 (358)
T ss_pred CEEEEccCCCCCCChHHhCcCcccCcCcccccc-ccccccC--------cccccccccccccceEEEehhheEECCCCCC
Confidence 999999999999999999999999986432100 0000001 0000012346999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+++.+.++|+++.+...++++++|||+|+|++|++++|+|+.+|+.+|++++++++|+++++++|+++++++++
T Consensus 151 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 230 (358)
T TIGR03451 151 PAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG 230 (358)
T ss_pred hhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC
Confidence 99999999999999988777788999999999999999999999999999966999999999999999999999998865
Q ss_pred CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
.++.+.+.+++++ ++|+||||+|++..+..++++++++ |+
T Consensus 231 --~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~-G~ 271 (358)
T TIGR03451 231 --TDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLA-GT 271 (358)
T ss_pred --cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC-CE
Confidence 5677778888876 8999999999988899999999998 53
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-43 Score=323.25 Aligned_cols=279 Identities=55% Similarity=1.035 Sum_probs=231.3
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
..|||+++.++++.+++++++.|.|+++||+|||.+++||++|+..+.+.. .+|.++|||++|+|+++|+.+++|++
T Consensus 11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~ 87 (378)
T PLN02827 11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK 87 (378)
T ss_pred ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence 689999999888779999999999999999999999999999999887642 36789999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|++.+...|+.|.+|+.++.++|++.... ..|....++..++...|...+++...|+|++|+.++.+.++++|+++
T Consensus 88 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 88 GDHVLTVFTGECGSCRHCISGKSNMCQVLGLE-RKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCEEEEecCCCCCCChhhhCcCcccccCcccc-ccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 99999998889999999999999999874221 01111001111111111111111234699999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+.+++.++|+++....+++++++|||+|+|++|++++|+|+++|+..|++++.+++|+++++++|++.+++++
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~ 246 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPN 246 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEccc
Confidence 99999998888889998776778899999999999999999999999999996788998899999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+...++.+.+.+++++++|+|||++|....+..+++++++++|
T Consensus 247 ~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G 289 (378)
T PLN02827 247 DLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWG 289 (378)
T ss_pred ccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCC
Confidence 5334567778877766899999999998789999999998733
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-43 Score=320.63 Aligned_cols=280 Identities=64% Similarity=1.099 Sum_probs=237.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
+++||+++.+.+++++++++|.|.|.++||+||++++++|++|++++.|..+ ..+|.++|||++|+|+++|+.++++++
T Consensus 1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08277 1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP 79 (365)
T ss_pred CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence 4789999998888899999999999999999999999999999999988654 457899999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+...|+.|.+|..++.++|++.... ..|.. .++..+....|...+.+...|+|++|+.++.+.++++|+++
T Consensus 80 GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l 157 (365)
T cd08277 80 GDKVIPLFIGQCGECSNCRSGKTNLCQKYRAN-ESGLM-PDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAA 157 (365)
T ss_pred CCEEEECCCCCCCCCchhcCcCcccCcCcccc-ccccc-cCCccccccCCcccccccccccceeeEEEchhheEECCCCC
Confidence 99999988899999999999999999986543 12222 22211222222222223345799999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+.+++.|+|+++.+..+++++++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++.+++.+
T Consensus 158 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 158 PLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred CHHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999999877788899999999999999999999999999997799999999999999999999998876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+....+.+.+.+++++++|+||||+|....+..+++++++++|
T Consensus 238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G 280 (365)
T cd08277 238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWG 280 (365)
T ss_pred cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCC
Confidence 5333456677777767899999999988889999999987534
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-42 Score=313.96 Aligned_cols=253 Identities=30% Similarity=0.489 Sum_probs=223.7
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++++++.|.|+++||+||+.++++|++|+..+.+.+.. ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 79 (339)
T cd08239 1 MRGAVFPGDRT-VELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVG 79 (339)
T ss_pred CeEEEEecCCc-eEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCC
Confidence 78999997764 999999999999999999999999999999988776432 2458999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+..+...|++|.+|+.++++.|.+... .+|.. .+ |+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~--~~g~~-~~------------------G~~ae~~~v~~~~~~~~P~~~~ 138 (339)
T cd08239 80 DRVMVYHYVGCGACRNCRRGWMQLCTSKRA--AYGWN-RD------------------GGHAEYMLVPEKTLIPLPDDLS 138 (339)
T ss_pred CEEEECCCCCCCCChhhhCcCcccCcCccc--ccccC-CC------------------CcceeEEEechHHeEECCCCCC
Confidence 999999999999999999999999987543 12221 22 4999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+++++.|+|+++ ....++++++|||+|+|++|++++|+|+++|+++|++++++++++++++++|++.++++++
T Consensus 139 ~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~ 217 (339)
T cd08239 139 FADGALLLCGIGTAYHAL-RRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ 217 (339)
T ss_pred HHHhhhhcchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc
Confidence 999999999999999986 5677889999999999999999999999999955999999999999999999999998865
Q ss_pred CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+ .+.+.+++++ ++|+||||+|+...+..++++|+++
T Consensus 218 --~~-~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 255 (339)
T cd08239 218 --DD-VQEIRELTSGAGADVAIECSGNTAARRLALEAVRPW 255 (339)
T ss_pred --ch-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 33 5667777766 8999999999988789999999998
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-41 Score=309.78 Aligned_cols=259 Identities=29% Similarity=0.396 Sum_probs=212.2
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCc-ccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC-ILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|+++++..++...++++.+.|.+.+++|+|||.++|||++|++++.+..+....|. ++|||++|+|+++| .++.+++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~G 79 (350)
T COG1063 1 MKAAVVYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79 (350)
T ss_pred CceeEEEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCC
Confidence 57777877766455777877778999999999999999999999999876666666 99999999999999 77789999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE-cCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK-IDPQA 167 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-iP~~~ 167 (291)
|||++.+..+|+.|.+|+.+..++|++... .|..... ....|+|+||+.+|.++++. +|+++
T Consensus 80 drVvv~~~~~Cg~C~~C~~G~~~~C~~~~~---~g~~~~~--------------~~~~G~~aEyv~vp~~~~~~~~pd~~ 142 (350)
T COG1063 80 DRVVVEPNIPCGHCRYCRAGEYNLCENPGF---YGYAGLG--------------GGIDGGFAEYVRVPADFNLAKLPDGI 142 (350)
T ss_pred CEEEECCCcCCCCChhHhCcCcccCCCccc---ccccccc--------------CCCCCceEEEEEeccccCeecCCCCC
Confidence 999999999999999999999999996542 1211100 00124999999999755555 47887
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~ 246 (291)
+.+++++..++.++|++........++.+|+|+|+|++|++++++++.+|+++|+++|.+++|++++++ ++++.+++.
T Consensus 143 -~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~ 221 (350)
T COG1063 143 -DEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNP 221 (350)
T ss_pred -ChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecC
Confidence 455566666999998864555556666699999999999999999999999999999999999999998 556555555
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.. ......+.+.+++ ++|++|||+|....+.+++++++++|
T Consensus 222 ~~--~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG 263 (350)
T COG1063 222 SE--DDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGG 263 (350)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCC
Confidence 44 2566677788888 99999999999999999999999993
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=307.67 Aligned_cols=231 Identities=29% Similarity=0.403 Sum_probs=207.6
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCC-CCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+.+ ++++|+|.|.|+++||||||++++||+.|+..++|. .+..++|.++|.|.+|+|+++|+.++.|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 688999987765 889999999999999999999999999999999987 33447899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... .| ..|+|+||+.++.+.++++|++
T Consensus 81 ~GdrV~~~~~-~~---------------------------------------------~~G~~AEy~~v~a~~~~~~P~~ 114 (326)
T COG0604 81 VGDRVAALGG-VG---------------------------------------------RDGGYAEYVVVPADWLVPLPDG 114 (326)
T ss_pred CCCEEEEccC-CC---------------------------------------------CCCcceeEEEecHHHceeCCCC
Confidence 9999985530 00 1249999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+|+++|+++++++.|||+++....++++|++|||+|+ |++|.+++|+||++|+ +++++.++++|.++++++|++++++
T Consensus 115 ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~-~~v~~~~s~~k~~~~~~lGAd~vi~ 193 (326)
T COG0604 115 LSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGA-TVVAVVSSSEKLELLKELGADHVIN 193 (326)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-cEEEEecCHHHHHHHHhcCCCEEEc
Confidence 9999999999999999999989899999999999986 9999999999999998 6777667788888999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+++ .++.+.+++++++ ++|+|||++|... +..++++|+++ |+
T Consensus 194 y~~--~~~~~~v~~~t~g~gvDvv~D~vG~~~-~~~~l~~l~~~-G~ 236 (326)
T COG0604 194 YRE--EDFVEQVRELTGGKGVDVVLDTVGGDT-FAASLAALAPG-GR 236 (326)
T ss_pred CCc--ccHHHHHHHHcCCCCceEEEECCCHHH-HHHHHHHhccC-CE
Confidence 887 5599999999998 9999999999965 88899999999 53
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=307.86 Aligned_cols=255 Identities=22% Similarity=0.356 Sum_probs=212.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhc-CCCC--CCCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.++|++++.++++ +++++++.| +.++||||||+++|||++|++++. +... ...+|.++|||++|+|+++ .+++
T Consensus 3 ~~~~~~~~~~~~~-~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 3 VKTQSCVVAGKKD-VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ccceEEEEecCCc-eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 5789999998877 999999987 689999999999999999999875 3332 2357999999999999999 6788
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+..+..+|+.|.+|..++.+.|++... +|....+ ....|+|+||+.++.+.++++|
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~~~~--------------~~~~G~~aey~~v~~~~~~~~P 141 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRF---FGSAMYF--------------PHVDGGFTRYKVVDTAQCIPYP 141 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcce---eeccccc--------------CCCCCceeeeEEechHHeEECC
Confidence 9999999999999999999999999999997543 2211000 0013499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++++.++. ..+++++|+++. .....++++|+|+|+|++|++++|+|+++|+++|++++++++|+++++++|++.++
T Consensus 142 ~~l~~~~aa~-~~~~~~a~~al~-~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi 219 (343)
T PRK09880 142 EKADEKVMAF-AEPLAVAIHAAH-QAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLV 219 (343)
T ss_pred CCCCHHHHHh-hcHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEe
Confidence 9999876654 457789999774 45566899999999999999999999999997799999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++ .++.+ +.+. .+++|+||||+|.+..+..++++++++|
T Consensus 220 ~~~~--~~~~~-~~~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G 260 (343)
T PRK09880 220 NPQN--DDLDH-YKAE-KGYFDVSFEVSGHPSSINTCLEVTRAKG 260 (343)
T ss_pred cCCc--ccHHH-Hhcc-CCCCCEEEECCCCHHHHHHHHHHhhcCC
Confidence 8765 33333 2222 2369999999999888999999999983
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-41 Score=311.95 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=215.0
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCC-------CCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQ-------AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~-------~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
-|||+++.++++ ++++++|.|.|+ +|||||||+++|||++|++++.|..+ ..+|.++|||++|+|+++|+.
T Consensus 2 ~mka~v~~~~~~-~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~ 79 (393)
T TIGR02819 2 GNRGVVYLGPGK-VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRD 79 (393)
T ss_pred CceEEEEecCCc-eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCc
Confidence 489999998886 999999999874 68999999999999999999987653 357899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCC---CCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
+++|++||||++.+...|+.|.+|.+++.++|.+..... .+|+... | ...|+|+||+.++..
T Consensus 80 V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~-~--------------~~~G~~aey~~v~~~ 144 (393)
T TIGR02819 80 VEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDM-G--------------GWVGGQSEYVMVPYA 144 (393)
T ss_pred cccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceeccccc-C--------------CCCCceEEEEEechh
Confidence 999999999999999999999999999999999753210 0111000 0 013599999999964
Q ss_pred --ceEEcCCCCCh----hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 159 --SVAKIDPQAPL----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 159 --~~~~iP~~~~~----~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
.++++|++++. ..++.+.+++.++|+++ ...+++++++|||.|+|++|++++|+|+++|+..|++++.+++|+
T Consensus 145 ~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~ 223 (393)
T TIGR02819 145 DFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARL 223 (393)
T ss_pred hCceEECCCcccccccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHH
Confidence 79999998753 34566777889999976 457889999999998999999999999999996677778889999
Q ss_pred HHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCCh--------------HHHHHHHHHhhccCCC
Q 022865 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV--------------SVMRAALECCHKVSGT 291 (291)
Q Consensus 233 ~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~--------------~~~~~~~~~l~~~gg~ 291 (291)
++++++|++. +++.. ..++.+.+.+++++ ++|++||++|.+ .++++++++++++ |+
T Consensus 224 ~~a~~~Ga~~-v~~~~-~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~ 294 (393)
T TIGR02819 224 AQARSFGCET-VDLSK-DATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVG-GA 294 (393)
T ss_pred HHHHHcCCeE-EecCC-cccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCC-CE
Confidence 9999999974 44432 13566677777776 899999999986 4799999999999 53
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-40 Score=303.12 Aligned_cols=282 Identities=60% Similarity=1.003 Sum_probs=238.3
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
-.+||++++...+++++++++|.|.+.++||+||++++++|++|+..+.|... ..+|.++|||++|+|+++|+.++.|+
T Consensus 5 ~~~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 5 VIKCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred cceeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCC
Confidence 46799999999888899999999999999999999999999999999988752 35788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+..+|+.|.+|..++.+.|++.......|.. .++..++..+|.+.+++...|+|++|+.++.+.++++|++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~ 162 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLM-QDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAA 162 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccc-cCCccccccCCcccccccCCCcccceEEecccceeeCCCC
Confidence 999999988899999999999999999876432112222 3333344444544444445689999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++++.++|+++....+++++++|+|+|+|++|++++++|+.+|+.+|+++++++++++.++++|++++++.
T Consensus 163 l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 163 APLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred CChHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 99999999999999999987788899999999999889999999999999998679999999999999999999998887
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
.+...++.+.+.+++++++|++|||+|.+..+..++..+.+.||
T Consensus 243 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G 286 (373)
T cd08299 243 QDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYG 286 (373)
T ss_pred cccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCC
Confidence 65333466677776666899999999987778888877654324
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-40 Score=303.62 Aligned_cols=263 Identities=23% Similarity=0.321 Sum_probs=217.9
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
+-|++++++.+.+.++.+++.+++.|.|+++||+|||.+++||++|++++.|.++...+|.++|||++|+|+++|+.+++
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 87 (360)
T PLN02586 8 EHPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKK 87 (360)
T ss_pred hchhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCc
Confidence 46788888888887777999999999999999999999999999999999876654467899999999999999999999
Q ss_pred CCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
|++||+|++.+. .+|+.|.+|..++.+.|++...... ... .+| ....|+|+||+.++.+.++++
T Consensus 88 ~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~-~~~-~~g-------------~~~~G~~aey~~v~~~~~~~l 152 (360)
T PLN02586 88 FKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYN-SIG-HDG-------------TKNYGGYSDMIVVDQHFVLRF 152 (360)
T ss_pred cCCCCEEEEccccCcCCCCccccCCCcccCCCcccccc-ccc-cCC-------------CcCCCccceEEEEchHHeeeC
Confidence 999999986554 4799999999999999997543100 000 001 001249999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCCE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTE 242 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~~ 242 (291)
|+++++++++.+.+...|+|+++.....++++++|||.|+|++|++++|+||++|+ +|++++.++++ .++++++|++.
T Consensus 153 P~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~vi~~~~~~~~~~~~~~~~Ga~~ 231 (360)
T PLN02586 153 PDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGL-KVTVISSSSNKEDEAINRLGADS 231 (360)
T ss_pred CCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCcchhhhHHHhCCCcE
Confidence 99999999999999999999987666667899999999999999999999999999 77777666655 55668899998
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++..+ . +.+.+.++ ++|+|||++|....+..++++++++|
T Consensus 232 vi~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G 272 (360)
T PLN02586 232 FLVSTD--P---EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNG 272 (360)
T ss_pred EEcCCC--H---HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCc
Confidence 887654 1 23444444 69999999998878999999999983
|
|
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=296.47 Aligned_cols=277 Identities=59% Similarity=1.041 Sum_probs=247.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
+||+++.+.++++++++++.|.+.+++|+||+.++++|++|+..+.+... ..+|.++|||++|+|+++|++++.+++||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd 79 (365)
T cd05279 1 CKAAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGD 79 (365)
T ss_pred CceeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCC
Confidence 57899998887899999999999999999999999999999998887653 34678999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+..+|++|.+|..++.+.|.....+...|.. .+|..++..+|+..+++.+.|+|++|+.++.+.++++|+++++
T Consensus 80 ~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 80 KVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLM-SDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred EEEEcCCCCCCCChhhcCCCcccCCCcccccccccc-cCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 999998899999999999999999998876666655 6677777778888888888899999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+.+++.++|+++.....++++++|||+|+|++|++++++|+.+|+..|++++++++++++++++|++++++..+.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 99999999999999988788889999999999889999999999999999668888889999999999999998887653
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhh-cc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~-~~ 288 (291)
+.++.+.+.+++++++|++||++|....+..++++++ ++
T Consensus 239 ~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~ 278 (365)
T cd05279 239 DKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGG 278 (365)
T ss_pred cchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCC
Confidence 2266777777775689999999998778999999999 76
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-39 Score=294.48 Aligned_cols=252 Identities=31% Similarity=0.494 Sum_probs=218.6
Q ss_pred EEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-CCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 13 AVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
+++.+++++++++++|.|.|+++||+|||.++++|++|++.+.+.. +...+|.++|||++|+|+++|+.+..+ +||+|
T Consensus 2 ~~~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV 80 (349)
T TIGR03201 2 WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAV 80 (349)
T ss_pred ceEecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEE
Confidence 4667777779999999999999999999999999999999874433 233578999999999999999999877 99999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC------
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------ 165 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~------ 165 (291)
++.+..+|+.|.+|..++.++|..... .|.. .+ |+|++|+.++.+.++++|+
T Consensus 81 ~~~~~~~cg~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~ae~~~v~~~~~~~ip~~~~~~~ 138 (349)
T TIGR03201 81 IVPAVIPCGECELCKTGRGTICRAQKM---PGND-MQ------------------GGFASHIVVPAKGLCVVDEARLAAA 138 (349)
T ss_pred EECCCCCCCCChhhhCcCcccCCCCCc---cCcC-CC------------------CcccceEEechHHeEECCccccccc
Confidence 999999999999999999999986533 1211 22 4999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++.++.+.+++.++|+++. ...++++++|+|+|+|++|++++|+|+++|+ +|++++++++++++++++|++.+++
T Consensus 139 ~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~~i~ 216 (349)
T TIGR03201 139 GLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQTAKAMGA-AVVAIDIDPEKLEMMKGFGADLTLN 216 (349)
T ss_pred CCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceEec
Confidence 8999999988899999999774 5788999999999999999999999999999 8999999999999999999999888
Q ss_pred CCCCC-chHHHHHHhhcCC-Ccc----EEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHD-KPIQQVLVDLTDG-GVD----YSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~-~~~~~~v~~~~~g-g~d----~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+.+ .++.+.+.+++++ ++| +||||+|+...+..++++++++|
T Consensus 217 ~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G 266 (349)
T TIGR03201 217 PKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGG 266 (349)
T ss_pred CccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCC
Confidence 76532 3566777888876 776 89999999888999999999983
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-39 Score=295.32 Aligned_cols=251 Identities=25% Similarity=0.334 Sum_probs=202.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC---CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+.+++++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|++ ++|+
T Consensus 1 mka~~~~~~~~~l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~ 79 (355)
T cd08230 1 MKAIAVKPGKPGVRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLS 79 (355)
T ss_pred CceeEecCCCCCCeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCC
Confidence 688888755444999999999999999999999999999999999886532 246889999999999999999 8999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+...|+.|.+|..++.+.|...... ..|....+ |+|+||+.++.+.++++|++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~-~~g~~~~~------------------G~~aey~~~~~~~~~~~P~~ 140 (355)
T cd08230 80 PGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYT-ERGIKGLH------------------GFMREYFVDDPEYLVKVPPS 140 (355)
T ss_pred CCCEEEeccccCCCcChhhhCcCcccCCCccee-ccCcCCCC------------------ccceeEEEeccccEEECCCC
Confidence 999999988889999999999999999875321 11221122 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhh------hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC---ChhhHHHHHh
Q 022865 167 APLDKVCLLGCGVPTGLGAVWN------TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI---DPKKFDRAKN 237 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~------~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~---~~~~~~~~~~ 237 (291)
++ + ++++..++.+++.++.. ....+++++|+|+|+|++|++++|+||++|+ +|+++++ +++|++++++
T Consensus 141 ~~-~-~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~-~vi~~~~~~~~~~~~~~~~~ 217 (355)
T cd08230 141 LA-D-VGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGF-EVYVLNRRDPPDPKADIVEE 217 (355)
T ss_pred CC-c-ceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCHHHHHHHHH
Confidence 98 3 34444455555444322 2235789999999999999999999999999 7999887 6889999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+|++. +++.+ .++.+ . . ..+++|+||||+|.+..+..++++++++|
T Consensus 218 ~Ga~~-v~~~~--~~~~~-~-~-~~~~~d~vid~~g~~~~~~~~~~~l~~~G 263 (355)
T cd08230 218 LGATY-VNSSK--TPVAE-V-K-LVGEFDLIIEATGVPPLAFEALPALAPNG 263 (355)
T ss_pred cCCEE-ecCCc--cchhh-h-h-hcCCCCEEEECcCCHHHHHHHHHHccCCc
Confidence 99986 55544 23322 1 1 12489999999999888999999999983
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-39 Score=290.08 Aligned_cols=243 Identities=23% Similarity=0.317 Sum_probs=210.7
Q ss_pred EEEecCC----CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 13 AVAWEPN----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 13 ~~~~~~~----~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
+.+..+| +.++++++|.|.|+++||+|||.++++|++|++.+.|.++...+|.++|||++|+|+++|+.+++|++|
T Consensus 2 ~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G 81 (329)
T TIGR02822 2 WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVG 81 (329)
T ss_pred eeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCC
Confidence 4455554 348999999999999999999999999999999998876544457899999999999999999999999
Q ss_pred CEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|++.+. ..|+.|.+|..++.+.|+++.. .|.. .+ |+|++|+.++.+.++++|+++
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~lP~~~ 139 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRY---TGWD-TD------------------GGYAEYTTVPAAFAYRLPTGY 139 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCccc---CCcc-cC------------------CcceeEEEeccccEEECCCCC
Confidence 99987654 4799999999999999997643 2221 23 499999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++.+.|+|+++ ...+++++++|||+|+|++|++++|+|+.+|+ +|++++++++|+++++++|++++++..
T Consensus 140 ~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~-~vi~~~~~~~~~~~a~~~Ga~~vi~~~ 217 (329)
T TIGR02822 140 DDVELAPLLCAGIIGYRAL-LRASLPPGGRLGLYGFGGSAHLTAQVALAQGA-TVHVMTRGAAARRLALALGAASAGGAY 217 (329)
T ss_pred CHHHhHHHhccchHHHHHH-HhcCCCCCCEEEEEcCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHhCCceecccc
Confidence 9999999999999999987 46789999999999999999999999999999 799999999999999999999988753
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+.. .+++|+++++.+....+..++++++++ |+
T Consensus 218 ~~~-----------~~~~d~~i~~~~~~~~~~~~~~~l~~~-G~ 249 (329)
T TIGR02822 218 DTP-----------PEPLDAAILFAPAGGLVPPALEALDRG-GV 249 (329)
T ss_pred ccC-----------cccceEEEECCCcHHHHHHHHHhhCCC-cE
Confidence 211 126899999998888999999999998 53
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=293.15 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=210.1
Q ss_pred EEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 12 a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
+++..+.++.+++.+++.|.|+++||+|||.+++||++|++++.|.+....+|.++|||++|+|+++|+.+++|++||+|
T Consensus 9 ~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV 88 (375)
T PLN02178 9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFKEGDRV 88 (375)
T ss_pred EEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccCCCCEE
Confidence 45555555568889999999999999999999999999999998865434578999999999999999999999999999
Q ss_pred eecCCC-CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChh
Q 022865 92 IPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (291)
Q Consensus 92 ~~~~~~-~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~ 170 (291)
++.+.. .|+.|.+|+.++.++|++..... .+.. ..| ....|+|+||+.++.+.++++|++++++
T Consensus 89 ~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~-~~g-------------~~~~G~~aey~~v~~~~~~~lP~~ls~~ 153 (375)
T PLN02178 89 GVGVIIGSCQSCESCNQDLENYCPKVVFTY-NSRS-SDG-------------TRNQGGYSDVIVVDHRFVLSIPDGLPSD 153 (375)
T ss_pred EEcCccCCCCCChhHhCcchhcCCCccccc-cccc-cCC-------------CcCCCccccEEEEchHHeEECCCCCCHH
Confidence 866654 69999999999999999864310 0000 001 0113499999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCC
Q 022865 171 KVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 171 ~aa~l~~~~~ta~~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~ 248 (291)
+++.+.+...|+|+++..... .+++++|+|.|+|++|++++|+|+++|+ +|++++.+++ ++++++++|++.++++.+
T Consensus 154 ~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga-~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~ 232 (375)
T PLN02178 154 SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGL-RVTVISRSSEKEREAIDRLGADSFLVTTD 232 (375)
T ss_pred HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCC-eEEEEeCChHHhHHHHHhCCCcEEEcCcC
Confidence 999999999999987744433 3689999999999999999999999999 7888877654 478889999999888654
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
. +.+.+.++ ++|+||||+|.+..+..++++++++ |+
T Consensus 233 --~---~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~-G~ 268 (375)
T PLN02178 233 --S---QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVS-GK 268 (375)
T ss_pred --H---HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCC-CE
Confidence 1 24445443 6999999999987899999999998 53
|
|
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=289.26 Aligned_cols=267 Identities=23% Similarity=0.285 Sum_probs=219.7
Q ss_pred CCCCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCC
Q 022865 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|-+-+....++|+++..++.++.+++++.|+|+++||+||+.++++|++|+..+.+.+....+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~ 80 (357)
T PLN02514 1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS 80 (357)
T ss_pred CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence 33444446799999999999999999999999999999999999999999999988765446789999999999999999
Q ss_pred CCCCCCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc
Q 022865 81 GVTEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 159 (291)
.+++|++||+|++.+. ..|+.|.+|..+..+.|.+.......++ ..| ....|+|++|+.++.+.
T Consensus 81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~--~~g-------------~~~~G~~aey~~v~~~~ 145 (357)
T PLN02514 81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVY--TDG-------------KPTQGGFASAMVVDQKF 145 (357)
T ss_pred CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccc--cCC-------------ccCCCccccEEEEchHH
Confidence 9999999999986554 3699999999999999987532100000 001 11235999999999999
Q ss_pred eEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc
Q 022865 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF 238 (291)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ 238 (291)
++++|+++++++++.+++++.|+|+++......+++++++|+|+|++|++++|+||++|+ ++++++.++++++.+ +++
T Consensus 146 ~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~-~vi~~~~~~~~~~~~~~~~ 224 (357)
T PLN02514 146 VVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSDKKREEALEHL 224 (357)
T ss_pred eEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhc
Confidence 999999999999999999999999987665666899999999999999999999999999 788777777766554 579
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
|++.+++..+ . ..+.+.+. ++|++|||+|....+..++++++++|
T Consensus 225 Ga~~~i~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G 269 (357)
T PLN02514 225 GADDYLVSSD--A---AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDG 269 (357)
T ss_pred CCcEEecCCC--h---HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCC
Confidence 9988776543 1 23444443 69999999998778999999999983
|
|
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=288.64 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=212.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. ++++++|.|.| .++||+|||.++++|++|+..+..... ..+|.++|||++|+|+++|+.+++|++|
T Consensus 1 Mka~~~~~~~~-~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~vG 78 (347)
T PRK10309 1 MKSVVNDTDGI-VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA-HYYPITLGHEFSGYVEAVGSGVDDLHPG 78 (347)
T ss_pred CceEEEeCCCc-eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC-CCCCcccccceEEEEEEeCCCCCCCCCC
Confidence 68999998875 99999999997 699999999999999999875432211 2357899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..+..+.|..... .|.. . .|+|++|+.++.+.++++|++++
T Consensus 79 d~V~~~~~~~c~~c~~c~~g~~~~c~~~~~---~g~~-~------------------~G~~aey~~v~~~~~~~lP~~~s 136 (347)
T PRK10309 79 DAVACVPLLPCFTCPECLRGFYSLCAKYDF---IGSR-R------------------DGGNAEYIVVKRKNLFALPTDMP 136 (347)
T ss_pred CEEEECCCcCCCCCcchhCcCcccCCCcce---eccC-C------------------CCccceeEEeehHHeEECcCCCC
Confidence 999999999999999999999999986432 1211 2 34999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++++.+. ++.++|+++ ....++++++|+|+|+|++|++++|+|+++|+..|++++++++++++++++|++.+++++.
T Consensus 137 ~~~aa~~~-~~~~~~~~~-~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 214 (347)
T PRK10309 137 IEDGAFIE-PITVGLHAF-HLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE 214 (347)
T ss_pred HHHhhhhh-HHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc
Confidence 99988764 455677764 5677889999999999999999999999999966899999999999999999999988765
Q ss_pred CCchHHHHHHhhcCC-Ccc-EEEEcCCChHHHHHHHHHhhccC
Q 022865 249 HDKPIQQVLVDLTDG-GVD-YSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d-~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.. .+.+.+++.+ ++| ++|||+|+...+..++++++++|
T Consensus 215 --~~-~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G 254 (347)
T PRK10309 215 --MS-APQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRA 254 (347)
T ss_pred --cC-HHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCC
Confidence 23 3456666655 888 99999999888999999999983
|
|
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=286.17 Aligned_cols=253 Identities=31% Similarity=0.517 Sum_probs=219.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---C--------CCCCCcccccceeEEEEEe
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---P--------EGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~--------~~~~p~~~G~e~~G~Vv~~ 78 (291)
|||+++.+++. +++++++.|.|.++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~-l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~v 79 (351)
T cd08233 1 MKAARYHGRKD-IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEV 79 (351)
T ss_pred CceEEEecCCc-eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEe
Confidence 68999988765 9999999999999999999999999999988765321 1 1136889999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
|+++++|++||+|+..+...|++|.+|+.+..+.|+.... .|.... .|+|++|+.++.+
T Consensus 80 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~g~~a~~~~~~~~ 138 (351)
T cd08233 80 GSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGF---IGLGGG------------------GGGFAEYVVVPAY 138 (351)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCce---eccCCC------------------CCceeeEEEechH
Confidence 9999999999999999888999999999999999985432 111101 2499999999999
Q ss_pred ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
.++++|+++++++++.+ .++.++|+++ ...+++++++|+|+|+|.+|++++|+|+.+|+.+|+++++++++.++++++
T Consensus 139 ~~~~lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ 216 (351)
T cd08233 139 HVHKLPDNVPLEEAALV-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEEL 216 (351)
T ss_pred HeEECcCCCCHHHhhhc-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 99999999999988766 5788999987 778899999999999999999999999999997899999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|++.++++++ .++.+.+++++++ ++|+|||++|....+..++++|+++
T Consensus 217 ga~~~i~~~~--~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 265 (351)
T cd08233 217 GATIVLDPTE--VDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPR 265 (351)
T ss_pred CCCEEECCCc--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC
Confidence 9999998775 5677788888776 7999999999877899999999988
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-38 Score=286.12 Aligned_cols=263 Identities=28% Similarity=0.457 Sum_probs=225.6
Q ss_pred eEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC------
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE------ 84 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~------ 84 (291)
||+++.++++.+++++++.|.|+++||+||+.++++|++|+....|.++...+|.++|||++|+|+++|+++++
T Consensus 2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~ 81 (361)
T cd08231 2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP 81 (361)
T ss_pred eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence 78999998877999999999999999999999999999999998887653467889999999999999999986
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc-ceEEc
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SVAKI 163 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~i 163 (291)
|++||+|+..+..+|++|..|..+.++.|.+.... |.....+ .....|+|++|+.++.+ .++++
T Consensus 82 ~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~---~~~~~~~------------~~~~~g~~a~~~~v~~~~~~~~l 146 (361)
T cd08231 82 LKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKY---GHEASCD------------DPHLSGGYAEHIYLPPGTAIVRV 146 (361)
T ss_pred cCCCCEEEEcccCCCCCChhHhCcCccccccchhc---ccccccc------------CCCCCcccceEEEecCCCceEEC
Confidence 99999999999999999999999999999976542 2210000 00123599999999986 79999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
|+++++..++++++++.|+|+++......+++++|||+|+|.+|++++++|+.+|+++|+++++++++.++++++|++.+
T Consensus 147 P~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~v 226 (361)
T cd08231 147 PDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADAT 226 (361)
T ss_pred CCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeE
Confidence 99999999998889999999988766666799999999999999999999999999789999999999999999999988
Q ss_pred eCCCCCC-chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~-~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++... .++...+.+.+++ ++|++|||+|+...+..++++++++
T Consensus 227 i~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 273 (361)
T cd08231 227 IDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRG 273 (361)
T ss_pred EcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccC
Confidence 8876522 2233567777776 8999999999877799999999988
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-38 Score=265.31 Aligned_cols=232 Identities=28% Similarity=0.350 Sum_probs=215.6
Q ss_pred CcccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
..|+..|-+++.+.|.. +++++.|.|+|+++|++||..|+|+|..|..+.+|-+.+.+.|++||-|.+|+|+++|+.+
T Consensus 4 ~~p~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gv 83 (336)
T KOG1197|consen 4 ASPPLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGV 83 (336)
T ss_pred CCCchheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCc
Confidence 46788899999988764 8999999999999999999999999999999999999877899999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
+++++||||.-.. ..|.|+++..+|...+++
T Consensus 84 tdrkvGDrVayl~-------------------------------------------------~~g~yaee~~vP~~kv~~ 114 (336)
T KOG1197|consen 84 TDRKVGDRVAYLN-------------------------------------------------PFGAYAEEVTVPSVKVFK 114 (336)
T ss_pred cccccccEEEEec-------------------------------------------------cchhhheeccccceeecc
Confidence 9999999997332 124899999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+|+.+++..|+++.+.++|||..+++-.++++|++|||+.+ |++|+++.|+++..|. .+|++.++.+|.+.+++.|+.
T Consensus 115 vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a-~tI~~asTaeK~~~akenG~~ 193 (336)
T KOG1197|consen 115 VPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGA-HTIATASTAEKHEIAKENGAE 193 (336)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCc-EEEEEeccHHHHHHHHhcCCc
Confidence 99999999999999999999998989999999999999965 9999999999999999 899998999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.|+++. +++.+.+.+++++ |+|+++|++|. +++...+.+|++.|
T Consensus 194 h~I~y~~--eD~v~~V~kiTngKGVd~vyDsvG~-dt~~~sl~~Lk~~G 239 (336)
T KOG1197|consen 194 HPIDYST--EDYVDEVKKITNGKGVDAVYDSVGK-DTFAKSLAALKPMG 239 (336)
T ss_pred ceeeccc--hhHHHHHHhccCCCCceeeeccccc-hhhHHHHHHhccCc
Confidence 9999987 7899999999988 99999999998 45999999999984
|
|
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=283.54 Aligned_cols=256 Identities=28% Similarity=0.399 Sum_probs=223.7
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++++++.|.+.++||+||++++++|++|+..+.+......+|.++|||++|+|+++|+.+++|++||
T Consensus 1 mka~~~~~~~~-~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd 79 (351)
T cd08285 1 MKAFAMLGIGK-VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGD 79 (351)
T ss_pred CceEEEccCCc-cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCC
Confidence 78999999875 89999999999999999999999999999998877655446689999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCCC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~~ 167 (291)
+|+..+..+|++|..|..++.+.|.+... +.++. ....|+|++|+.++.+ .++++|+++
T Consensus 80 ~V~~~~~~~~~~c~~c~~g~~~~~~~~~~--~~~~~-----------------~~~~g~~~~y~~v~~~~~~~~~lP~~~ 140 (351)
T cd08285 80 RVIVPAITPDWRSVAAQRGYPSQSGGMLG--GWKFS-----------------NFKDGVFAEYFHVNDADANLAPLPDGL 140 (351)
T ss_pred EEEEcCcCCCCCCHHHHCcCcccCcCCCC--Ccccc-----------------CCCCcceeEEEEcchhhCceEECCCCC
Confidence 99998878999999999999999987531 11110 1123499999999874 899999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++.+.|+|+++ ....++++++|||+|+|++|++++|+|+++|+..|++++++++++++++++|++.+++++
T Consensus 141 ~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 219 (351)
T cd08285 141 TDEQAVMLPDMMSTGFHGA-ELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYK 219 (351)
T ss_pred CHHHhhhhccchhhHHHHH-HccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCC
Confidence 9999999988999999974 677899999999998899999999999999997799999999999999999999998876
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. .++.+.+.+++.+ ++|++||++|++..+..++++++++
T Consensus 220 ~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 259 (351)
T cd08285 220 N--GDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPG 259 (351)
T ss_pred C--CCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcC
Confidence 5 4566677777665 8999999999888899999999988
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=283.95 Aligned_cols=276 Identities=40% Similarity=0.741 Sum_probs=229.2
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++.++++++++++.+.|.+.++||+||+.++++|++|+..+.+.++ ..+|.++|||++|+|+++|+++..|++
T Consensus 1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~ 79 (365)
T cd08278 1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP 79 (365)
T ss_pred CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence 5799999998777799999999999999999999999999999999888654 346889999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccC-CCce-ecccCCcceeeeEEecccceEEcCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN-GKPI-YHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~-~~~~-~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
||+|++.+. .|+.|..|..+..++|.+.......|.. .+|-.-+... |.+. -+++..|+|++|+.++.++++++|+
T Consensus 80 Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~ 157 (365)
T cd08278 80 GDHVVLSFA-SCGECANCLSGHPAYCENFFPLNFSGRR-PDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK 157 (365)
T ss_pred CCEEEEccc-CCCCChHHhCCCcccccCcccccccccc-cCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence 999998764 8999999999999999865431111111 1110000000 0000 0123457999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++.++.+++++.|||.++.....++++++|+|+|+|.+|++++|+|+++|+..+++++++++|+++++++|++.+++
T Consensus 158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 99999999999999999998877888999999999988999999999999999977999999999999999999998888
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++. .++.+.+.++++.++|+++||+|....+..++++++++
T Consensus 238 ~~~--~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 278 (365)
T cd08278 238 PKE--EDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPR 278 (365)
T ss_pred CCC--cCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccC
Confidence 765 45666777777448999999999877899999999987
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-37 Score=281.43 Aligned_cols=239 Identities=18% Similarity=0.233 Sum_probs=192.5
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC----CCCCcccccceeEEEEEeCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.-|++++.++++ +++++.+.|. +++||||||+++|||++|++++.|.+.+ ..+|.++|||++|+|+++|.+ +
T Consensus 2 ~~~~~~~~~~~~-~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 2 INQVYRLVRPKF-FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cccceEEeccce-EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 457889988876 9999999995 9999999999999999999999886532 257999999999999998864 6
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|++.+..+|+ |+.| ...+.|.+... .|.. .+ |+|+||+.++.+.++++|
T Consensus 78 ~~vGdrV~~~~~~~~~-~~~~--~~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~vP 132 (341)
T cd08237 78 YKVGTKVVMVPNTPVE-KDEI--IPENYLPSSRF---RSSG-YD------------------GFMQDYVFLPPDRLVKLP 132 (341)
T ss_pred cCCCCEEEECCCCCch-hccc--chhccCCCcce---eEec-CC------------------CceEEEEEEchHHeEECC
Confidence 9999999998877776 5556 35567765432 1111 23 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhh--hcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~--~~~~~~g~~vlI~G~g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+++++++|+++. +++++|+++.. ...+++|++|||+|+|++|++++|++++ +|..+|++++++++|++++++++++
T Consensus 133 ~~l~~~~aa~~~-~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~ 211 (341)
T cd08237 133 DNVDPEVAAFTE-LVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADET 211 (341)
T ss_pred CCCChHHhhhhc-hHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCce
Confidence 999998877554 78888887643 3456889999999999999999999986 6665899999999999999886654
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCC---ChHHHHHHHHHhhccCCC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG---NVSVMRAALECCHKVSGT 291 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g---~~~~~~~~~~~l~~~gg~ 291 (291)
..++ + .... ++|+|||++| .+..+..++++++++ |+
T Consensus 212 ~~~~------~-------~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~-G~ 251 (341)
T cd08237 212 YLID------D-------IPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQ-GT 251 (341)
T ss_pred eehh------h-------hhhccCCcEEEECCCCCccHHHHHHHHHhCcCC-cE
Confidence 3221 1 1112 6999999999 467899999999998 53
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-36 Score=273.82 Aligned_cols=251 Identities=28% Similarity=0.485 Sum_probs=220.2
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++.++++++++.|.+.++||+||+.++++|++|+..+.+..+...+|.++|||++|+|+++|+.+++|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd 80 (333)
T cd08296 1 YKAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGD 80 (333)
T ss_pred CeEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCC
Confidence 79999999866799999999999999999999999999999999888654445688999999999999999999999999
Q ss_pred EEeecC-CCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 90 HVIPCY-QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 90 ~V~~~~-~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
+|++.+ ...|++|.+|..+..+.|.+... .|.. .+ |+|++|+.++.+.++++|++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~---~~~~-~~------------------g~~a~~~~v~~~~~~~lp~~~~ 138 (333)
T cd08296 81 RVGVGWHGGHCGTCDACRRGDFVHCENGKV---TGVT-RD------------------GGYAEYMLAPAEALARIPDDLD 138 (333)
T ss_pred EEEeccccCCCCCChhhhCcCcccCCCCCc---cCcc-cC------------------CcceeEEEEchhheEeCCCCCC
Confidence 998754 46799999999999999997653 2221 12 3899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+.+++.+++++.++|+++.. ..+.++++|||+|+|.+|++++++|+++|+ +|++++++++++++++++|+++++++..
T Consensus 139 ~~~aa~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~~ 216 (333)
T cd08296 139 AAEAAPLLCAGVTTFNALRN-SGAKPGDLVAVQGIGGLGHLAVQYAAKMGF-RTVAISRGSDKADLARKLGAHHYIDTSK 216 (333)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHcCCcEEecCCC
Confidence 99999999999999998744 588999999999999999999999999999 7999999999999999999998888765
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+.++ +++|++||++|....+..++++++++
T Consensus 217 --~~~~~~~~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~ 252 (333)
T cd08296 217 --EDVAEALQEL--GGAKLILATAPNAKAISALVGGLAPR 252 (333)
T ss_pred --ccHHHHHHhc--CCCCEEEECCCchHHHHHHHHHcccC
Confidence 3455566655 36999999998777899999999988
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=274.32 Aligned_cols=251 Identities=25% Similarity=0.415 Sum_probs=215.4
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++++++.|.|.++|++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+.++.|++||
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd 79 (339)
T PRK10083 1 MKSIVIEKPNS-LAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGE 79 (339)
T ss_pred CeEEEEecCCe-eEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCC
Confidence 68999998774 99999999999999999999999999999999888765446789999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+...|+.|.+|..+++++|.+... .++. ..|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~~~~~~~~~ip~~~~~ 137 (339)
T PRK10083 80 RVAVDPVISCGHCYPCSIGKPNVCTSLVV---LGVH-------------------RDGGFSEYAVVPAKNAHRIPDAIAD 137 (339)
T ss_pred EEEEccccCCCCCccccCcCcccCCCCce---EEEc-------------------cCCcceeeEEechHHeEECcCCCCH
Confidence 99999988999999999999999975432 1111 1248999999999999999999998
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+.++ +..++.++|. +....+++++++|+|+|+|.+|++++|+|+. +|+..+++++++++|+++++++|+++++++++
T Consensus 138 ~~a~-~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~ 215 (339)
T PRK10083 138 QYAV-MVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ 215 (339)
T ss_pred HHHh-hhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc
Confidence 8876 4467788885 5577789999999999999999999999996 69977888999999999999999999988765
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+... +.++|++||++|....+..++++++++
T Consensus 216 --~~~~~~~~~~-g~~~d~vid~~g~~~~~~~~~~~l~~~ 252 (339)
T PRK10083 216 --EPLGEALEEK-GIKPTLIIDAACHPSILEEAVTLASPA 252 (339)
T ss_pred --ccHHHHHhcC-CCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 3455555331 125789999999877899999999998
|
|
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-36 Score=273.28 Aligned_cols=254 Identities=27% Similarity=0.461 Sum_probs=219.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC---------CCCCcccccceeEEEEEeCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE---------GLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~---------~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|||+++.++++ +++++++.|++.+++|+||++++++|+.|+.++.|.... .++|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~~~-~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~ 79 (350)
T cd08256 1 MRAVVCHGPQD-YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79 (350)
T ss_pred CeeEEEecCCc-eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCC
Confidence 68999988875 999999999999999999999999999999988775311 14678899999999999999
Q ss_pred CCC--CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 81 GVT--EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 81 ~~~--~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
.++ .|++||+|+..+..+|+.|.+|..++.+.|..... +|+.. ...|+|++|+.++.+
T Consensus 80 ~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~-----------------~~~g~~~~~~~~~~~ 139 (350)
T cd08256 80 GAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDL---YGFQN-----------------NVNGGMAEYMRFPKE 139 (350)
T ss_pred CcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccc---eeecc-----------------CCCCcceeeEEcccc
Confidence 998 89999999999999999999999999999986432 22210 023499999999987
Q ss_pred -ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 159 -SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 159 -~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
.++++|++++++.++.+ .++.++|.++ +..+++++++|+|.|+|.+|++++++|+++|+..++++++++++.+++++
T Consensus 140 ~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 217 (350)
T cd08256 140 AIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARK 217 (350)
T ss_pred cceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHH
Confidence 67899999999999888 7889999987 77889999999997789999999999999998778899999999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++.+. .++.+.+.+++++ ++|++||++|....+..++++++++
T Consensus 218 ~g~~~v~~~~~--~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~ 267 (350)
T cd08256 218 FGADVVLNPPE--VDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL 267 (350)
T ss_pred cCCcEEecCCC--cCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 99988887764 4666777777776 8999999999766789999999988
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-36 Score=272.14 Aligned_cols=254 Identities=30% Similarity=0.466 Sum_probs=225.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..+++++++.+.+.|.+.+++++||+.++++|++|+..+.+.+. ...+|.++|||++|+|+++|+++.+|+
T Consensus 1 ~ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~ 80 (340)
T cd05284 1 MKAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLK 80 (340)
T ss_pred CeeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCc
Confidence 68999998877899999999999999999999999999999998877654 335688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+..+|+.|..|..+..++|++... .|+. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~P~~ 138 (340)
T cd05284 81 EGDPVVVHPPWGCGTCRYCRRGEENYCENARF---PGIG-TD------------------GGFAEYLLVPSRRLVKLPRG 138 (340)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCCCCcc---cCcc-CC------------------CcceeeEEecHHHeEECCCC
Confidence 99999999989999999999999999998765 2332 23 39999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++++.+++.+.|||+++... ..+.++++|||+|+|.+|++++++|+.+|..+|+++.+++++.++++++|++++++
T Consensus 139 ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~ 218 (340)
T cd05284 139 LDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLN 218 (340)
T ss_pred CCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEc
Confidence 99999999999999999987665 46888999999999889999999999999338899989999999999999998888
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++. . +.+.+.++.++ ++|+++|++|....+..++++|+++
T Consensus 219 ~~~--~-~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~ 259 (340)
T cd05284 219 ASD--D-VVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKG 259 (340)
T ss_pred CCc--c-HHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcC
Confidence 765 3 67778887766 8999999999877799999999988
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-36 Score=271.34 Aligned_cols=256 Identities=32% Similarity=0.505 Sum_probs=224.8
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++.+++.|.| .++||+||+.++++|++|+..+.+.++...+|.++|||++|+|+++|+++++|++|
T Consensus 1 ~ka~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (347)
T cd05278 1 MKALVYLGPGK-IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPG 79 (347)
T ss_pred CceEEEecCCc-eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCC
Confidence 57999988776 89999999999 99999999999999999999988877656678999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+..+|+.|.+|..+...+|.+.......+ ....|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~g~~~~~~~v~~~~~~~~~lP~~ 140 (347)
T cd05278 80 DRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLG-------------------NRIDGGQAEYVRVPYADMNLAKIPDG 140 (347)
T ss_pred CEEEecCCCCCCCChhHhCcCcccCcCCCcccccc-------------------cCCCCeeeEEEEecchhCeEEECCCC
Confidence 99999999999999999999999998755321101 1223599999999987 99999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++.+.|||+++ ...+++++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++.++++
T Consensus 141 ~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~ 219 (347)
T cd05278 141 LPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINP 219 (347)
T ss_pred CCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcC
Confidence 99999999999999999987 67789999999998889999999999999997578888889999999999999998887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+.+++++ ++|++||++|....+..++++|+++
T Consensus 220 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 260 (347)
T cd05278 220 KN--GDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPG 260 (347)
T ss_pred Cc--chHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcC
Confidence 75 4577778777765 8999999999866799999999988
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=272.64 Aligned_cols=274 Identities=46% Similarity=0.816 Sum_probs=230.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++...+.++++++++.|.+.++||+||+.++++|+.|+.++.+.++ ..+|.++|+|++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd 79 (363)
T cd08279 1 MRAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGD 79 (363)
T ss_pred CeEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCC
Confidence 68999999888899999999999999999999999999999998888664 35678999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+..+|++|.+|++++.+.|.+..... +|.. .++.++....|...+.+...|+|++|+.++.+.++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~ 157 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGIL-GGQL-PDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPL 157 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCccccccc-cccc-CCCcccccccCccccccccCccceeeEEeccccEEECCCCCCh
Confidence 9999999999999999999999998754210 0000 0111111111222222344579999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+++.+.++|.++.....+.++++|||+|+|.+|++++++|+.+|+.+|+++++++++.++++++|++++++.+.
T Consensus 158 ~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~- 236 (363)
T cd08279 158 DRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE- 236 (363)
T ss_pred HHeehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC-
Confidence 9999999999999998878888999999999988999999999999999955999999999999999999988887765
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++...+.++..+ ++|++||++++...+..++++++++
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~ 275 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKG 275 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcC
Confidence 4566677777654 8999999999777799999999988
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=272.02 Aligned_cols=274 Identities=29% Similarity=0.399 Sum_probs=222.8
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++++++.|.| .+++|+||+.++++|++|+.++.|.++..++|.++|||++|+|+++|+++++|++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 79 (386)
T cd08283 1 MKALVWHGKGD-VRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVG 79 (386)
T ss_pred CeeEEEecCCC-ceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCC
Confidence 78999987754 99999999988 59999999999999999999998877655678999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+...|++|.+|..+..++|++....... .+..|.....+.|.........|+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~ 157 (386)
T cd08283 80 DRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEM--AKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDD 157 (386)
T ss_pred CEEEEcCcCCCCCChhhcCCCcccCCCccccccc--ccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCC
Confidence 9999998889999999999999999976432100 0000000000000000000124699999999987 89999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++.+.|+|+++ ....+.++++|||+|+|.+|++++++|+++|+.+|+++++++++++++++++...++++
T Consensus 158 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~ 236 (386)
T cd08283 158 LSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINF 236 (386)
T ss_pred CCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcC
Confidence 99999999999999999987 77889999999999889999999999999998679999999999999999854467766
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCCh---------------------HHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNV---------------------SVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~---------------------~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+++++ ++|+|||++|++ ..+..++++++++
T Consensus 237 ~~~-~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 299 (386)
T cd08283 237 EEV-DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKG 299 (386)
T ss_pred Ccc-hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccC
Confidence 541 1477778887776 899999999853 4688899999988
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=267.61 Aligned_cols=255 Identities=31% Similarity=0.452 Sum_probs=223.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++. +++++++.|.| .++||+||++++++|++|+.++.|.++...+|.++|||++|+|+++|++++.+++|
T Consensus 1 m~a~~~~~~~~-~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G 79 (345)
T cd08286 1 MKALVYHGPGK-ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVG 79 (345)
T ss_pred CceEEEecCCc-eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCC
Confidence 68999988876 99999999986 89999999999999999999998876555568899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+...|+.|.+|..+..+.|...... .|.. .+ |+|++|+.++.+ .++++|++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~------------------g~~~~~~~v~~~~~~~~~lp~~ 138 (345)
T cd08286 80 DRVLISCISSCGTCGYCRKGLYSHCESGGWI--LGNL-ID------------------GTQAEYVRIPHADNSLYKLPEG 138 (345)
T ss_pred CEEEECCcCCCCCChHHHCcCcccCCCcccc--cccc-cC------------------CeeeeEEEcccccCceEECCCC
Confidence 9999998889999999999999999865432 1111 22 489999999987 89999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+.+.+.++|.++....++.+++++||.|+|.+|.+++|+|+.+|..+|+++++++++.++++++|++.++++
T Consensus 139 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~ 218 (345)
T cd08286 139 VDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNS 218 (345)
T ss_pred CCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecc
Confidence 99999999999999999877677889999999999889999999999999994489999999999999999999988887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .++...+.+++.+ ++|++|||+|....+..++++|+++
T Consensus 219 ~~--~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 259 (345)
T cd08286 219 AK--GDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPG 259 (345)
T ss_pred cc--ccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCC
Confidence 65 4566667777665 8999999999877899999999887
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=267.37 Aligned_cols=255 Identities=29% Similarity=0.456 Sum_probs=222.8
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC------------CCCCCcccccceeEEEEE
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP------------EGLFPCILGHEAAGIVES 77 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~Vv~ 77 (291)
|||+++..++.+++++++|.|++.++||+||+.++++|++|+..+.+.++ ...+|.++|||++|+|++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~ 80 (350)
T cd08240 1 MKAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVA 80 (350)
T ss_pred CeeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEe
Confidence 78999998888899999999999999999999999999999998877543 224568899999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 78 ~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
+|+.++++++||+|+..+...|++|.+|..+..++|..... .|.. . .|.+++|+.++.
T Consensus 81 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~ 138 (350)
T cd08240 81 VGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRA---LGIF-Q------------------DGGYAEYVIVPH 138 (350)
T ss_pred eCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCc---eeee-c------------------cCcceeeEEecH
Confidence 99999999999999999999999999999999999976532 1211 2 248999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.++++|+++++.+++.+.+.+.|||+++.....++++++|+|+|+|.+|++++|+|+.+|+++|+++++++++++.+++
T Consensus 139 ~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 218 (350)
T cd08240 139 SRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKA 218 (350)
T ss_pred HHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 99999999999999999999999999988766666789999999889999999999999999788899899999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++.++ .++.+.+.++.++++|++||++|....+..++++|+++
T Consensus 219 ~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 267 (350)
T cd08240 219 AGADVVVNGSD--PDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKG 267 (350)
T ss_pred hCCcEEecCCC--ccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC
Confidence 99988877654 45556677666558999999999877899999999988
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-35 Score=265.36 Aligned_cols=255 Identities=32% Similarity=0.558 Sum_probs=224.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..++.++++++++.|.+.+++|+||+.++++|++|+..+.+..+...+|.++|+|++|+|+++|+.++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd 80 (345)
T cd08260 1 MRAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGD 80 (345)
T ss_pred CeeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCC
Confidence 79999998887899999999999999999999999999999999888766556688999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCCC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQA 167 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~~ 167 (291)
+|+......|++|.+|+.|+.++|.++.. .++. .+ |+|++|+.++.. .++++|+++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~~iP~~~ 138 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQ---PGFT-HP------------------GSFAEYVAVPRADVNLVRLPDDV 138 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcc---cccC-CC------------------CcceeEEEcccccCceEECCCCC
Confidence 99886667899999999999999998642 2221 12 489999999874 999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++++.+++++.|+|+++.....+.++++|+|+|+|.+|++++++|+.+|+ +|+++.+++++.++++++|++++++++
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~i~~~ 217 (345)
T cd08260 139 DFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGA-RVIAVDIDDDKLELARELGAVATVNAS 217 (345)
T ss_pred CHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHhCCCEEEccc
Confidence 9999999999999999988777889999999999999999999999999999 899998999999999999999998876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ..++.+.+.++..+++|++|||+|....+..++++++++
T Consensus 218 ~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~ 257 (345)
T cd08260 218 E-VEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKR 257 (345)
T ss_pred c-chhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcC
Confidence 4 235666677766558999999999777789999999988
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=266.69 Aligned_cols=276 Identities=32% Similarity=0.528 Sum_probs=228.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC---CC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE---VQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~---~~ 86 (291)
|||+++..++.++++++.+.|.++++||+||+.++++|++|+.++.+.++. .+|.++|||++|+|+++|+.+++ |+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G~v~~vG~~~~~~~~~~ 79 (367)
T cd08263 1 MKAAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISGEVVEVGPNVENPYGLS 79 (367)
T ss_pred CeeEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccceEEEEeCCCCCCCCcCC
Confidence 689999988777999999999999999999999999999999988876643 56789999999999999999988 99
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+..+|+.|.+|..+..++|.+...+...+....+|...+.....+-......|.|++|+.++.+.++++|++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 80 VGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred CCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence 99999998888999999999999999998653211110001111110000000000123469999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+++.+.|+|+++.....+.++++|||+|+|.+|++++++|+.+|+.+++++++++++.++++++|++.+++.
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 99999999999999999988777788999999999889999999999999999559999899999999999999989887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+.+..++ ++|+|||++++...+..++++++++
T Consensus 240 ~~--~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~ 280 (367)
T cd08263 240 AK--EDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDG 280 (367)
T ss_pred Cc--ccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcC
Confidence 65 4566777777655 8999999999975789999999988
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=271.74 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=218.2
Q ss_pred cccceeEEEEec--CCC---CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC----------CCCCCcccccc
Q 022865 6 QVITCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFPCILGHE 70 (291)
Q Consensus 6 ~~~~~~a~~~~~--~~~---~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e 70 (291)
.|.+|||+++.. .+. .+++++++.|.++++||+||+.++++|++|+..+.+... ....+.++|||
T Consensus 9 ~~~~~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e 88 (393)
T cd08246 9 VPEKMYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSD 88 (393)
T ss_pred CchhhhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccc
Confidence 457899998853 232 378899999999999999999999999999988766411 01123588999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCccee
Q 022865 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (291)
Q Consensus 71 ~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 150 (291)
++|+|+++|+.++.|++||+|++.+...|++|..|..+..++|+.... +|+... .|+|+
T Consensus 89 ~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~~~------------------~g~~a 147 (393)
T cd08246 89 ASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRI---WGYETN------------------YGSFA 147 (393)
T ss_pred eEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccccccccccc---ccccCC------------------CCcce
Confidence 999999999999999999999999999999999999999999986533 333212 24999
Q ss_pred eeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhh--cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 151 ~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~--~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
+|+.++...++++|+++++++++.+++++.|||+++... .+++++++|+|+|+ |++|++++++|+++|+ +++++++
T Consensus 148 ~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~-~vv~~~~ 226 (393)
T cd08246 148 QFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGA-NPVAVVS 226 (393)
T ss_pred eEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCC-eEEEEeC
Confidence 999999999999999999999999999999999987544 67899999999997 9999999999999999 7778889
Q ss_pred ChhhHHHHHhcCCCEEeCCCCCC--------------------chHHHHHHhhcCC--CccEEEEcCCChHHHHHHHHHh
Q 022865 228 DPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 228 ~~~~~~~~~~~ga~~~i~~~~~~--------------------~~~~~~v~~~~~g--g~d~v~d~~g~~~~~~~~~~~l 285 (291)
+++++++++++|++.+++.++.+ ..+.+.+.+++++ ++|++||++|+ ..+..+++++
T Consensus 227 s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~-~~~~~~~~~l 305 (393)
T cd08246 227 SEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGR-ATFPTSVFVC 305 (393)
T ss_pred CHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCch-HhHHHHHHHh
Confidence 99999999999999988864321 1356677777765 79999999998 5588999999
Q ss_pred hcc
Q 022865 286 HKV 288 (291)
Q Consensus 286 ~~~ 288 (291)
+++
T Consensus 306 ~~~ 308 (393)
T cd08246 306 DRG 308 (393)
T ss_pred ccC
Confidence 988
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=265.51 Aligned_cols=257 Identities=26% Similarity=0.420 Sum_probs=210.2
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+++++.+..+. .+++++++.|.|.++||+||++++++|++|+.++.+... ...+|.++|||++|+|+++|+.+++
T Consensus 16 ~~~~~~~~~~~~-~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~ 94 (364)
T PLN02702 16 EENMAAWLVGVN-TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKH 94 (364)
T ss_pred cccceEEEecCC-ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCC
Confidence 344555555554 489999999889999999999999999999998876321 1235788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+..+...|++|..|..+..+.|+.... ++.... .|+|++|+.++.+.++++|
T Consensus 95 ~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~---~~~~~~------------------~g~~~~y~~v~~~~~~~~P 153 (364)
T PLN02702 95 LVVGDRVALEPGISCWRCNLCKEGRYNLCPEMKF---FATPPV------------------HGSLANQVVHPADLCFKLP 153 (364)
T ss_pred CCCCCEEEEcCCCCCCCCcchhCcCcccCCCccc---cCCCCC------------------CCcccceEEcchHHeEECC
Confidence 9999999999999999999999999999986422 111111 2499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++.+++.. .++.++|+++ ...++.++++|+|+|+|++|++++++|+.+|+..|+++++++++.++++++|++.++
T Consensus 154 ~~l~~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~ 231 (364)
T PLN02702 154 ENVSLEEGAMC-EPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIV 231 (364)
T ss_pred CCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 99999888752 2444577765 677889999999998899999999999999997788999999999999999999887
Q ss_pred CCCCCCchHHHHHHhh---cCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDL---TDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~---~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.....++.+.+.++ .++++|+|||++|+...+..++++++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 278 (364)
T PLN02702 232 LVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAG 278 (364)
T ss_pred ecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 6543334555555544 3348999999999877899999999988
|
|
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-34 Score=262.94 Aligned_cols=255 Identities=29% Similarity=0.448 Sum_probs=216.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCC-CCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++..++ .+++++++.|.|. ++||+||+.++++|+.|+.+..+.++ ..+|.++|||++|+|+++|++++.+++|
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (344)
T cd08284 1 MKAVVFKGPG-DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVG 78 (344)
T ss_pred CeeEEEecCC-CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCC
Confidence 6789998764 5999999999985 99999999999999999998877654 3457889999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|++.+..+|++|.+|+.+..+.|++... +|.. + .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~------------~~~~~g~~~~~~~v~~~~~~~~~~p~~ 140 (344)
T cd08284 79 DRVVSPFTIACGECFYCRRGQSGRCAKGGL---FGYA---G------------SPNLDGAQAEYVRVPFADGTLLKLPDG 140 (344)
T ss_pred CEEEEcccCCCCCChHHhCcCcccCCCCcc---cccc---c------------cCCCCCceeEEEEcccccCceEECCCC
Confidence 999999889999999999999999986532 1110 0 00113489999999864 99999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++++.+++++.|+|+++. ...+.++++|+|+|+|.+|++++++|+.+|+.+|+++++++++.++++++|+. .++.
T Consensus 141 l~~~~a~~l~~~~~ta~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~ 218 (344)
T cd08284 141 LSDEAALLLGDILPTGYFGAK-RAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINF 218 (344)
T ss_pred CCHHHhhhhcCchHHHHhhhH-hcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEec
Confidence 999999999999999999874 47888999999998899999999999999976799998899999999999975 4554
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++...+.+++++ ++|++||++|....+..++++++++
T Consensus 219 ~~--~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~ 259 (344)
T cd08284 219 ED--AEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPG 259 (344)
T ss_pred CC--cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccC
Confidence 43 4566777777765 8999999999877899999999887
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-35 Score=271.66 Aligned_cols=247 Identities=20% Similarity=0.302 Sum_probs=199.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhh-cCCCC-C-----CCCCcccccceeEEEEEeCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDP-E-----GLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~-~g~~~-~-----~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|+|||+++.+++. ++++++|.|.|+++||+|||.++|||++|++.+ .+... . ..+|.++|||++|+|+++|+
T Consensus 1 m~~~a~~~~~~~~-l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 1 MKTKAWRMYGKGD-LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred CCcEEEEEEcCCc-eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 5789999999885 999999999999999999999999999999976 44321 1 14688999999999999999
Q ss_pred CCC-CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc-
Q 022865 81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV- 158 (291)
Q Consensus 81 ~~~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 158 (291)
+++ .|++||+|++.+...|+.|..|.. +|+. .+| +|++|+.++.+
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~--------------~g~~-~~G------------------~~aey~~v~~~~ 126 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPG--------------YSYT-YPG------------------GLATYHIIPNEV 126 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCC--------------cccc-CCC------------------cceEEEEecHHh
Confidence 998 599999999988888888776621 1111 233 99999999987
Q ss_pred ---ceEEcCCCCChhhhhhh-cccc-hhhhhhh--------hhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcC--CCeE
Q 022865 159 ---SVAKIDPQAPLDKVCLL-GCGV-PTGLGAV--------WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAG--ASRV 222 (291)
Q Consensus 159 ---~~~~iP~~~~~~~aa~l-~~~~-~ta~~~~--------~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g--~~~v 222 (291)
.++++|+++++++++.+ +... .+++.++ ....+++++++|+|+|+ |++|++++|+|+++| +.+|
T Consensus 127 ~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~V 206 (410)
T cd08238 127 MEQDCLLIYEGDGYAEASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLL 206 (410)
T ss_pred ccCCeEECCCCCCHHHHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceE
Confidence 68999999999988854 2111 1233322 24567899999999985 999999999999985 4579
Q ss_pred EEEcCChhhHHHHHhc--------CCC-EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 223 IGIDIDPKKFDRAKNF--------GVT-EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 223 ~~~~~~~~~~~~~~~~--------ga~-~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++.+++|+++++++ |++ .++++.+ ..++.+.+.+++++ ++|++||++|....+..++++++++|
T Consensus 207 i~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~-~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G 282 (410)
T cd08238 207 VVTDVNDERLARAQRLFPPEAASRGIELLYVNPAT-IDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDG 282 (410)
T ss_pred EEEcCCHHHHHHHHHhccccccccCceEEEECCCc-cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCC
Confidence 9999999999999997 666 4566543 13567778888877 89999999998888999999999884
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-34 Score=264.62 Aligned_cols=261 Identities=30% Similarity=0.435 Sum_probs=216.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+++ +++++++|.|.+ .++|++||++++++|++|+..+.|..+ ..+|.++|||++|+|+++|+.+..+++|
T Consensus 1 m~~~~~~~~~-~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~G 78 (375)
T cd08282 1 MKAVVYGGPG-NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVG 78 (375)
T ss_pred CceEEEecCC-ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCC
Confidence 5788888776 599999999996 899999999999999999999988765 3468899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+..+..+|+.|..|..+..++|.+.......++ .|..+ .....|+|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~---~~~~~---------~~~~~g~~a~y~~v~~~~~~~~~lP~~ 146 (375)
T cd08282 79 DRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGA---YGYVD---------MGPYGGGQAEYLRVPYADFNLLKLPDR 146 (375)
T ss_pred CEEEEeCCCCCCCCHHHHCcCcccCCCCCccccccc---ccccc---------cCCCCCeeeeEEEeecccCcEEECCCC
Confidence 999998999999999999999999987532100000 00000 00012599999999976 89999999
Q ss_pred CChh---hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 167 APLD---KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 167 ~~~~---~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
++++ .++.+..++.|+|+++ ....++++++|+|.|+|.+|++++|+|+++|+.+|++++++++|+++++++|+ ..
T Consensus 147 ~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~-~~ 224 (375)
T cd08282 147 DGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGA-IP 224 (375)
T ss_pred CChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-eE
Confidence 9998 4677778899999987 77889999999999889999999999999998678889999999999999998 45
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChH-----------HHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS-----------VMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~-----------~~~~~~~~l~~~ 288 (291)
+++.+ .++.+.+.+++++++|++|||+|... .+..++++++++
T Consensus 225 v~~~~--~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~ 278 (375)
T cd08282 225 IDFSD--GDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPG 278 (375)
T ss_pred eccCc--ccHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcC
Confidence 55544 45666777776667999999999763 588999999988
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=266.85 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=218.5
Q ss_pred cccceeEEEEec--CCC---CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC----------CCCCC-ccccc
Q 022865 6 QVITCKAAVAWE--PNK---PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP----------EGLFP-CILGH 69 (291)
Q Consensus 6 ~~~~~~a~~~~~--~~~---~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~----------~~~~p-~~~G~ 69 (291)
.|.+|||+++.. .++ .+++.+++.|.|.++|++||+.++++|++|+....+... ....| .++||
T Consensus 4 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~ 83 (398)
T TIGR01751 4 VPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGS 83 (398)
T ss_pred cchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceeccc
Confidence 457899999965 443 499999999999999999999999999999877655321 11223 37999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcce
Q 022865 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF 149 (291)
Q Consensus 70 e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (291)
|++|+|+++|+.++.|++||+|++.....|++|.+|..++.++|+.+.. +|+...+ |+|
T Consensus 84 e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~------------------g~~ 142 (398)
T TIGR01751 84 DASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRI---WGYETNF------------------GSF 142 (398)
T ss_pred ceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCcccccccccc---ccccCCC------------------ccc
Confidence 9999999999999999999999999999999999999999999986543 2222122 499
Q ss_pred eeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhh--hcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022865 150 SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 150 ~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~--~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
++|+.++.+.++++|+++++++++.+.+++.|+|+++.. ..++.++++++|+|+ |.+|++++++|+++|+ ++++++
T Consensus 143 ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~-~vi~~~ 221 (398)
T TIGR01751 143 AEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGG-NPVAVV 221 (398)
T ss_pred eEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-eEEEEc
Confidence 999999999999999999999999999999999998654 467889999999998 9999999999999999 778888
Q ss_pred CChhhHHHHHhcCCCEEeCCCCCC--------------------chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHh
Q 022865 227 IDPKKFDRAKNFGVTEFVNPKDHD--------------------KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 227 ~~~~~~~~~~~~ga~~~i~~~~~~--------------------~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l 285 (291)
++++++++++++|++.+++.++++ ..+.+.+.+++++ ++|++|||+|. ..+..+++++
T Consensus 222 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~-~~~~~~~~~l 300 (398)
T TIGR01751 222 SSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGR-ATFPTSVFVC 300 (398)
T ss_pred CCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcH-HHHHHHHHhh
Confidence 889999999999999999865421 1355667777775 89999999997 5588999999
Q ss_pred hcc
Q 022865 286 HKV 288 (291)
Q Consensus 286 ~~~ 288 (291)
+++
T Consensus 301 ~~~ 303 (398)
T TIGR01751 301 RRG 303 (398)
T ss_pred ccC
Confidence 988
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=260.49 Aligned_cols=252 Identities=29% Similarity=0.438 Sum_probs=214.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||++++.++++.+++.+.|.|.|+++||+||++++++|++|+.++.+.. ....+|.++|||++|+|+++|+.++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~ 80 (341)
T PRK05396 1 MKALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFK 80 (341)
T ss_pred CceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCC
Confidence 6899999988889999999999999999999999999999998765532 1224678899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+..+|..|..|..+..++|++... .+.. .+ |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~iP~~ 138 (341)
T PRK05396 81 VGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKG---VGVN-RP------------------GAFAEYLVIPAFNVWKIPDD 138 (341)
T ss_pred CCCEEEECCCCCCCCChhhhCcChhhCCCcce---eeec-CC------------------CcceeeEEechHHeEECcCC
Confidence 99999999999999999999999999987432 2211 22 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+ .++.++++++.. ...++++|+|.|+|.+|++++|+|+++|+++|+++++++++.++++++|+++++++
T Consensus 139 l~~~~~~~~-~~~~~~~~~~~~--~~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~ 215 (341)
T PRK05396 139 IPDDLAAIF-DPFGNAVHTALS--FDLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNV 215 (341)
T ss_pred CCHHHhHhh-hHHHHHHHHHHc--CCCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecC
Confidence 998888754 455666554432 34589999998889999999999999999668888889999999999999999887
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+.+++++ ++|+||||+|....+..++++++++
T Consensus 216 ~~--~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~ 256 (341)
T PRK05396 216 AK--EDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHG 256 (341)
T ss_pred cc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 65 4577778877765 8999999999888899999999988
|
|
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=257.38 Aligned_cols=252 Identities=31% Similarity=0.481 Sum_probs=214.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+++. +++.+.|.|.| +++||+||+.++++|++|+..+.|..+. ..|.++|||++|+|+++|+.+.++++|
T Consensus 1 m~~~~~~~~~~-~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~vG~~v~~~~~G 78 (345)
T cd08287 1 MRATVIHGPGD-IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT-RAPAPIGHEFVGVVEEVGSEVTSVKPG 78 (345)
T ss_pred CceeEEecCCc-eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC-CCCcccccceEEEEEEeCCCCCccCCC
Confidence 68999987765 99999999996 8999999999999999999988776542 457899999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|+.....+|+.|.+|..+..++|.+... +|.. .+| +|++|+.++.+ .++++|++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~g------------------~~~~~~~v~~~~~~~~~lP~~ 136 (345)
T cd08287 79 DFVIAPFAISDGTCPFCRAGFTTSCVHGGF---WGAF-VDG------------------GQGEYVRVPLADGTLVKVPGS 136 (345)
T ss_pred CEEEeccccCCCCChhhhCcCcccCCCCCc---ccCC-CCC------------------ceEEEEEcchhhCceEECCCC
Confidence 999886677899999999999999997543 2211 233 89999999864 99999999
Q ss_pred CChhhhh-----hhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 167 APLDKVC-----LLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 167 ~~~~~aa-----~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
++++.+. .+...+.++|+++ ....++++++++|.|+|.+|++++|+|+++|+..++++++++++.++++++|++
T Consensus 137 l~~~~~~~~~~~~l~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~ 215 (345)
T cd08287 137 PSDDEDLLPSLLALSDVMGTGHHAA-VSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGAT 215 (345)
T ss_pred CChhhhhhhhhHhhhcHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCc
Confidence 9872221 1225678888876 467889999999988899999999999999996699999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+++++. .++.+.+.+++++ ++|++||++|....+..++++++++
T Consensus 216 ~v~~~~~--~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~ 261 (345)
T cd08287 216 DIVAERG--EEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPG 261 (345)
T ss_pred eEecCCc--ccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccC
Confidence 9998875 4677778877766 8999999999888899999999887
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=258.67 Aligned_cols=247 Identities=28% Similarity=0.441 Sum_probs=215.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.++++++++++++.|.+.++|++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+.++.+++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~ 80 (334)
T PRK13771 1 MKAVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGD 80 (334)
T ss_pred CeeEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCC
Confidence 68999999988899999999999999999999999999999998888765556688999999999999999998899999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|++....+|+.|.+|..++.+.|+.... +|.. . .|+|++|+.++.+.++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~~~~~~~~~lp~~~~~ 138 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLG---YGEE-L------------------DGFFAEYAKVKVTSLVKVPPNVSD 138 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCccccc---cccc-c------------------CceeeeeeecchhceEECCCCCCH
Confidence 99998888999999999999999988643 2211 1 248999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
.+++.+++.+.++|+++... .+.++++++|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++ ++.+++.+
T Consensus 139 ~~~a~l~~~~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~-~vi~~~~~~~~~~~~~~~-~~~~~~~~- 214 (334)
T PRK13771 139 EGAVIVPCVTGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGA-KVIAVTSSESKAKIVSKY-ADYVIVGS- 214 (334)
T ss_pred HHhhcccchHHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHH-HHHhcCch-
Confidence 99999999999999987555 8899999999988 9999999999999999 889888999999999888 66666543
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.+.+.++ +++|++|||+|+. .+..++++++++
T Consensus 215 ---~~~~~v~~~--~~~d~~ld~~g~~-~~~~~~~~l~~~ 248 (334)
T PRK13771 215 ---KFSEEVKKI--GGADIVIETVGTP-TLEESLRSLNMG 248 (334)
T ss_pred ---hHHHHHHhc--CCCcEEEEcCChH-HHHHHHHHHhcC
Confidence 344455554 3799999999985 488999999988
|
|
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=256.37 Aligned_cols=252 Identities=27% Similarity=0.447 Sum_probs=215.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..+++...++++|.|.+.++||+||++++++|++|+..+.+..+. ..|.++|||++|+|+++|++++.|++||
T Consensus 1 mka~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (338)
T PRK09422 1 MKAAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGD 79 (338)
T ss_pred CeEEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCC
Confidence 789999988774448999999999999999999999999999988776543 3467899999999999999999999999
Q ss_pred EEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 90 HVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 90 ~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
+|++.+. ..|+.|.+|..+..+.|.+... .|+. .+ |+|++|+.++.+.++++|++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~~~ 137 (338)
T PRK09422 80 RVSIAWFFEGCGHCEYCTTGRETLCRSVKN---AGYT-VD------------------GGMAEQCIVTADYAVKVPEGLD 137 (338)
T ss_pred EEEEccCCCCCCCChhhcCCCcccCCCccc---cCcc-cc------------------CcceeEEEEchHHeEeCCCCCC
Confidence 9987654 5799999999999999987643 2222 23 3999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.+++.+++.+.|+|+++ ....++++++|||+|+|++|++++++|+.+ |+ +|++++++++++++++++|++.+++++
T Consensus 138 ~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~~~ 215 (338)
T PRK09422 138 PAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNA-KVIAVDINDDKLALAKEVGADLTINSK 215 (338)
T ss_pred HHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCC-eEEEEeCChHHHHHHHHcCCcEEeccc
Confidence 999999999999999987 778899999999999999999999999984 98 899999999999999999998888875
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .++.+.+.+..+ ++|++|++.++...+..++++++++
T Consensus 216 ~~-~~~~~~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~ 254 (338)
T PRK09422 216 RV-EDVAKIIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAG 254 (338)
T ss_pred cc-ccHHHHHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCC
Confidence 31 345566776665 6896666666667799999999988
|
|
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=255.38 Aligned_cols=253 Identities=33% Similarity=0.502 Sum_probs=221.3
Q ss_pred eeEEEEecCCCC-eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPNKP-LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~~~-~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||++++..++++ +.+.+.+.|.+.+++|+||+.++++|+.|+..+.+.++ ...+|.++|+|++|+|+.+|+.++.|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~ 80 (338)
T cd08254 1 MKAWRFHKGSKGLLVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKV 80 (338)
T ss_pred CeeEEEecCCCCceEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCC
Confidence 689999988887 68888899999999999999999999999999888765 3356789999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..+..+|+.|.+|+.++.++|..+.. .|+. .+ |+|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp~~~ 138 (338)
T cd08254 81 GDRVAVPAVIPCGACALCRRGRGNLCLNQGM---PGLG-ID------------------GGFAEYIVVPARALVPVPDGV 138 (338)
T ss_pred CCEEEECCCCCCCCChhhhCcCcccCCCCCc---cccc-cC------------------CcceeeEEechHHeEECCCCC
Confidence 9999999989999999999999999965532 1221 22 489999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++.+++.++.++.|+|+++.....++++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.++++|++.+++..
T Consensus 139 ~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~-~V~~~~~s~~~~~~~~~~g~~~~~~~~ 217 (338)
T cd08254 139 PFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA-AVIAVDIKEEKLELAKELGADEVLNSL 217 (338)
T ss_pred CHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEcCC
Confidence 9999999999999999988777889999999999889999999999999999 799999999999999999998888766
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ....+.+ ....+ ++|+++||+|....+..++++|+++
T Consensus 218 ~--~~~~~~~-~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~ 256 (338)
T cd08254 218 D--DSPKDKK-AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPG 256 (338)
T ss_pred C--cCHHHHH-HHhcCCCceEEEECCCCHHHHHHHHHHhhcC
Confidence 4 3444445 44444 8999999999888899999999998
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=254.79 Aligned_cols=250 Identities=35% Similarity=0.567 Sum_probs=217.7
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..++. +++.+++.|.+.++|++|||.++++|+.|+....+..+...+|.++|+|++|+|+++|+.++.|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd 79 (337)
T cd08261 1 MKALVCEKPGR-LEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGD 79 (337)
T ss_pred CeEEEEeCCCc-eEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCC
Confidence 68999988764 99999999999999999999999999999999888765555678999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+..+|+.|..|..++.+.|...+. .++. ..|+|++|+.++.+ ++++|+++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~v~v~~~-~~~~p~~~~~ 136 (337)
T cd08261 80 RVVVDPYISCGECYACRKGRPNCCENLQV---LGVH-------------------RDGGFAEYIVVPAD-ALLVPEGLSL 136 (337)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCe---eeec-------------------CCCcceeEEEechh-eEECCCCCCH
Confidence 99998888999999999999999953211 1111 13489999999999 9999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++++ ..+.++++++ ....+.++++|||+|+|.+|.+++|+|+.+|+ +|+++.+++++.++++++|+++++++..
T Consensus 137 ~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~-~v~~~~~s~~~~~~~~~~g~~~v~~~~~- 212 (337)
T cd08261 137 DQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA-RVIVVDIDDERLEFARELGADDTINVGD- 212 (337)
T ss_pred HHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEECCCHHHHHHHHHhCCCEEecCcc-
Confidence 998876 5777888866 77889999999999889999999999999999 8999988999999999999999998876
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+.+++++ ++|++||++|+...+..++++|+++
T Consensus 213 -~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 251 (337)
T cd08261 213 -EDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHG 251 (337)
T ss_pred -cCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 4577778877766 8999999998877789999999987
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=259.71 Aligned_cols=255 Identities=27% Similarity=0.457 Sum_probs=213.4
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC------C-CCCCCcccccceeEEEEEeCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD------P-EGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
.+.+.++..+ .+++++++.|.++++||+||+.++++|++|+..+.+.. + ...+|.++|||++|+|+++|++
T Consensus 28 ~~~~~~~~~~--~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~ 105 (384)
T cd08265 28 NLGSKVWRYP--ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKN 105 (384)
T ss_pred cceeEEEeCC--CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCC
Confidence 3445555543 49999999999999999999999999999998876321 1 1346789999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
++.|++||+|++.+..+|+.|..|..+..++|..+.. .|+. .+ |+|++|+.++.+.++
T Consensus 106 v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~---~g~~-~~------------------g~~~~~v~v~~~~~~ 163 (384)
T cd08265 106 VKNFEKGDPVTAEEMMWCGMCRACRSGSPNHCKNLKE---LGFS-AD------------------GAFAEYIAVNARYAW 163 (384)
T ss_pred CCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCcce---eeec-CC------------------CcceeeEEechHHeE
Confidence 9999999999999999999999999999999997653 2322 13 389999999999999
Q ss_pred EcCCCC-------Chhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 162 KIDPQA-------PLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 162 ~iP~~~-------~~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
++|+++ ++. +++++.+++++|+++... .+++++++|+|+|+|.+|++++++|+.+|+.+|+++++++++.+
T Consensus 164 ~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~ 242 (384)
T cd08265 164 EINELREIYSEDKAFE-AGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRN 242 (384)
T ss_pred ECCccccccccCCCHH-HhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 999863 444 555666889999987655 68999999999988999999999999999877999999999999
Q ss_pred HHHhcCCCEEeCCCCC-CchHHHHHHhhcCC-CccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 234 RAKNFGVTEFVNPKDH-DKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~-~~~~~~~v~~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
+++++|++.++++++. ..++.+.+.+++.+ ++|+|+|++|+. ..+..++++|+.+
T Consensus 243 ~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~ 300 (384)
T cd08265 243 LAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKSIAIN 300 (384)
T ss_pred HHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcC
Confidence 9999999988887642 23677778888876 899999999973 5688999999988
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-34 Score=257.17 Aligned_cols=255 Identities=27% Similarity=0.382 Sum_probs=214.8
Q ss_pred eEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~ 90 (291)
|+++....+..+++++++.|.|.++|++||+.++++|++|+..+.+......+|.++|||++|+|+++|+.+++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~ 80 (337)
T cd05283 1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR 80 (337)
T ss_pred CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence 57788888888999999999999999999999999999999998887655567899999999999999999999999999
Q ss_pred Eee-cCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 91 VIP-CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 91 V~~-~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
|+. .....|++|.+|..++.++|+++.... .|.. ..+ ....|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~-------------~~~~g~~~~~~~v~~~~~~~lp~~~~~ 145 (337)
T cd05283 81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTY-NGKY-PDG-------------TITQGGYADHIVVDERFVFKIPEGLDS 145 (337)
T ss_pred EEEecCCCCCCCCccccCCchhcCcchhhcc-cccc-cCC-------------CcCCCcceeEEEechhheEECCCCCCH
Confidence 974 444689999999999999998864320 0100 000 123459999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+.+...++|+++ ....+.++++++|.|.|.+|++++++|+.+|+ +|+.++++++++++++++|++.+++...
T Consensus 146 ~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~vi~~~~- 222 (337)
T cd05283 146 AAAAPLLCAGITVYSPL-KRNGVGPGKRVGVVGIGGLGHLAVKFAKALGA-EVTAFSRSPSKKEDALKLGADEFIATKD- 222 (337)
T ss_pred HHhhhhhhHHHHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEecCcc-
Confidence 99999999999999976 44568999999998889999999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++. .. .++++|++|||+|....+..++++++++
T Consensus 223 -~~~~---~~-~~~~~d~v~~~~g~~~~~~~~~~~l~~~ 256 (337)
T cd05283 223 -PEAM---KK-AAGSLDLIIDTVSASHDLDPYLSLLKPG 256 (337)
T ss_pred -hhhh---hh-ccCCceEEEECCCCcchHHHHHHHhcCC
Confidence 2221 12 2348999999999876689999999887
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-34 Score=256.22 Aligned_cols=222 Identities=25% Similarity=0.351 Sum_probs=177.5
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecc-hhhhhhhcCCCCC---CCCCcccccceeEEEEEeCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALC-HTDAYTWSGKDPE---GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
++||+++.+++. +++++.+.|.|+++||||||++++|| ++|+..+.|.++. ..+|.++|||++|+|+++|+++ +
T Consensus 1 ~~ka~~~~~~~~-l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~ 78 (308)
T TIGR01202 1 KTQAIVLSGPNQ-IELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-G 78 (308)
T ss_pred CceEEEEeCCCe-EEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-C
Confidence 578999988765 99999999999999999999999996 7999988887543 2579999999999999999998 5
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||+... ..|..|.. | .+ |+|+||+.++.+.++++|
T Consensus 79 ~~vGdrV~~~~----~~c~~~~~---------------~---~~------------------G~~aey~~v~~~~~~~ip 118 (308)
T TIGR01202 79 FRPGDRVFVPG----SNCYEDVR---------------G---LF------------------GGASKRLVTPASRVCRLD 118 (308)
T ss_pred CCCCCEEEEeC----cccccccc---------------c---cC------------------CcccceEEcCHHHceeCC
Confidence 99999998632 12222110 0 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++++. +.+. ...|+|+++.. . ..++++++|+|+|++|++++|+||++|+..|++++.++++++.+.++ .++
T Consensus 119 ~~~~~~~-a~~~-~~~~a~~~~~~-~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i 191 (308)
T TIGR01202 119 PALGPQG-ALLA-LAATARHAVAG-A-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVL 191 (308)
T ss_pred CCCCHHH-Hhhh-HHHHHHHHHHh-c-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---ccc
Confidence 9998864 4444 57899998744 2 33688999999999999999999999996687888888888777654 344
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
++.+ . .+.++|+||||+|++.+++.++++++++ |+
T Consensus 192 ~~~~---~--------~~~g~Dvvid~~G~~~~~~~~~~~l~~~-G~ 226 (308)
T TIGR01202 192 DPEK---D--------PRRDYRAIYDASGDPSLIDTLVRRLAKG-GE 226 (308)
T ss_pred Chhh---c--------cCCCCCEEEECCCCHHHHHHHHHhhhcC-cE
Confidence 4321 0 1237999999999988899999999999 53
|
|
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-33 Score=253.70 Aligned_cols=252 Identities=32% Similarity=0.511 Sum_probs=218.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++++.+.|.+.+++|+||++++++|+.|+..+.+.+.....|.++|+|++|+|+++|+.++.|++||
T Consensus 1 ~~~~~~~~~~~-~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd 79 (343)
T cd08235 1 MKAAVLHGPND-VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGD 79 (343)
T ss_pred CeEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCC
Confidence 58999988774 99999999999999999999999999999999887664334577999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc-----eEEcC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-----VAKID 164 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~iP 164 (291)
+|+..++.+|++|..|..++.+.|+.+.. .|. ...|+|++|+.++.+. ++++|
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~g~~~~~v~v~~~~~~~~~~~~lP 137 (343)
T cd08235 80 RVFVAPHVPCGECHYCLRGNENMCPNYKK---FGN-------------------LYDGGFAEYVRVPAWAVKRGGVLKLP 137 (343)
T ss_pred EEEEccCCCCCCChHHHCcCcccCCCcce---ecc-------------------CCCCcceeeEEecccccccccEEECC
Confidence 99999999999999999999999987643 111 1234999999999998 99999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++.+++.+ +++.++|+++. ...++++++|+|+|+|.+|++++|+|+.+|+..|+++++++++.++++++|++.++
T Consensus 138 ~~~~~~~aa~~-~~~~~a~~~l~-~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~ 215 (343)
T cd08235 138 DNVSFEEAALV-EPLACCINAQR-KAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTI 215 (343)
T ss_pred CCCCHHHHHhh-hHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEe
Confidence 99999998776 68889999874 45899999999998899999999999999994488998999999999999998888
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++ .++.+.+.++..+ ++|+||||++....+..++++++++
T Consensus 216 ~~~~--~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~ 258 (343)
T cd08235 216 DAAE--EDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKG 258 (343)
T ss_pred cCCc--cCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcC
Confidence 8775 5677777777766 7999999999877789999999987
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=254.53 Aligned_cols=225 Identities=22% Similarity=0.244 Sum_probs=192.2
Q ss_pred eeEEEEecCCC-----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 022865 10 CKAAVAWEPNK-----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 10 ~~a~~~~~~~~-----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
|||+++.+++. .+++.++|.|.|+++||+||+.++++|++|+..+.|.++. ..+|.++|||++|+|+++|+.++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 68999998874 4788899999999999999999999999999998886543 35789999999999999999998
Q ss_pred C-CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 84 E-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 84 ~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
+ |++||+|+.... .+ |+|++|+.++.+.+++
T Consensus 81 ~~~~vGd~V~~~~~------------------------------~~------------------g~~a~~~~v~~~~~~~ 112 (324)
T cd08291 81 AQSLIGKRVAFLAG------------------------------SY------------------GTYAEYAVADAQQCLP 112 (324)
T ss_pred ccCCCCCEEEecCC------------------------------CC------------------CcchheeeecHHHeEE
Confidence 6 999999974321 01 3899999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~--G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|+++++++++.+++.+.|+|. +...... ++++++|+ |+|++|++++|+|+++|+ +|++++++++++++++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~-~~~~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALG-MLETARE-EGAKAVVHTAAASALGRMLVRLCKADGI-KVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHH-HHHhhcc-CCCcEEEEccCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCC
Confidence 9999999999988888899975 4455555 45566665 459999999999999999 89999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++++++. .++.+.+++++.+ ++|++||++|+.. ...++++++++
T Consensus 190 ~~~i~~~~--~~~~~~v~~~~~~~~~d~vid~~g~~~-~~~~~~~l~~~ 235 (324)
T cd08291 190 EYVLNSSD--PDFLEDLKELIAKLNATIFFDAVGGGL-TGQILLAMPYG 235 (324)
T ss_pred cEEEECCC--ccHHHHHHHHhCCCCCcEEEECCCcHH-HHHHHHhhCCC
Confidence 99998765 5677788888776 8999999999865 67789999888
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-33 Score=254.27 Aligned_cols=253 Identities=34% Similarity=0.529 Sum_probs=212.4
Q ss_pred EEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-C--CCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-P--EGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 12 a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|+++.+.. .+++++.+.|.+.++||+||+.++++|+.|+..+.+.. . ...+|.++|+|++|+|+++|+++++|++|
T Consensus 1 ~~~~~~~~-~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~G 79 (343)
T cd05285 1 AAVLHGPG-DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVG 79 (343)
T ss_pred CceEecCC-ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCC
Confidence 45677774 49999999999999999999999999999988764321 1 11357789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|++|.+|..+..++|++.... +.... .|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~------------------~g~~~~~~~v~~~~~~~lP~~~~ 138 (343)
T cd05285 80 DRVAIEPGVPCRTCEFCKSGRYNLCPDMRFA---ATPPV------------------DGTLCRYVNHPADFCHKLPDNVS 138 (343)
T ss_pred CEEEEccccCCCCChhHhCcCcccCcCcccc---ccccC------------------CCceeeeEEecHHHcEECcCCCC
Confidence 9999988899999999999999999875321 10001 24999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+.+++.+ .++.++++++ ....++++++++|.|+|.+|++++|+|+.+|+.+|+++.+++++.++++++|++.++++++
T Consensus 139 ~~~aa~~-~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~ 216 (343)
T cd05285 139 LEEGALV-EPLSVGVHAC-RRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRT 216 (343)
T ss_pred HHHhhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEecccc
Confidence 9998876 5788898875 7888999999999988999999999999999955899989999999999999999988765
Q ss_pred CCc-hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDK-PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~-~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .+.+.+.+.+++ ++|++|||+|....+..++++++++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 258 (343)
T cd05285 217 EDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPG 258 (343)
T ss_pred ccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 211 136667777766 7999999999876799999999988
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=251.07 Aligned_cols=248 Identities=36% Similarity=0.594 Sum_probs=216.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++..+++++.++++|.|.+.+++|+||++++++|++|+..+.+..+....|.++|||++|+|+++|++++.|++||
T Consensus 1 m~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 80 (332)
T cd08259 1 MKAAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGD 80 (332)
T ss_pred CeEEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCC
Confidence 68999987666799999999999999999999999999999999888766556788999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+......|+.|.+|..+..++|.+.. ..|.. . .|.|++|+.++...++++|+++++
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~------------------~g~~~~~~~v~~~~~~~ip~~~~~ 138 (332)
T cd08259 81 RVILYYYIPCGKCEYCLSGEENLCRNRA---EYGEE-V------------------DGGFAEYVKVPERSLVKLPDNVSD 138 (332)
T ss_pred EEEECCCCCCcCChhhhCCCcccCCCcc---ccccc-c------------------CCeeeeEEEechhheEECCCCCCH
Confidence 9999988899999999999999999752 23322 2 348999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
++++.+++++.++|+++.. ..+.++++++|+|+ |.+|++++++++.+|+ +|+++.+++++.+.+++++.+.+++.++
T Consensus 139 ~~~~~~~~~~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (332)
T cd08259 139 ESAALAACVVGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGA-RVIAVTRSPEKLKILKELGADYVIDGSK 216 (332)
T ss_pred HHHhhhccHHHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHcCCcEEEecHH
Confidence 9999999999999998766 88899999999987 9999999999999999 8888888889999998889877775432
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.+.+.. ++|++|+++|... ...++++++++
T Consensus 217 ----~~~~~~~~~--~~d~v~~~~g~~~-~~~~~~~~~~~ 249 (332)
T cd08259 217 ----FSEDVKKLG--GADVVIELVGSPT-IEESLRSLNKG 249 (332)
T ss_pred ----HHHHHHhcc--CCCEEEECCChHH-HHHHHHHhhcC
Confidence 445555543 7999999999865 88889999877
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-33 Score=251.67 Aligned_cols=244 Identities=29% Similarity=0.412 Sum_probs=207.2
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++..++ +.+++++.+.|+++++||+||+.++++|++|+..+.+. ....+|.++|||++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (325)
T cd08264 1 MKALVFEKSGIENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKG 79 (325)
T ss_pred CeeEEeccCCCCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCC
Confidence 6888887665 45888888888899999999999999999999887642 222457889999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|++.+..+|+.|.+|..++.++|.++.. .|+. ..|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~~p~~~~ 137 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGI---IGVV-------------------SNGGYAEYIVVPEKNLFKIPDSIS 137 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccce---eecc-------------------CCCceeeEEEcCHHHceeCCCCCC
Confidence 999999888999999999999999997543 2221 234899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+++++.+++.+.++|+++.. .+++++++++|+|+ |++|++++++|+++|+ +|+++. +.++++++|++++++.+
T Consensus 138 ~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~-~v~~~~----~~~~~~~~g~~~~~~~~ 211 (325)
T cd08264 138 DELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGA-EVIAVS----RKDWLKEFGADEVVDYD 211 (325)
T ss_pred HHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEe----HHHHHHHhCCCeeecch
Confidence 99999999999999998744 88999999999998 9999999999999999 777775 23666789998888764
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ ..+.+.+++ +++|+|+|++|. ..+..++++|+++
T Consensus 212 ~----~~~~l~~~~-~~~d~vl~~~g~-~~~~~~~~~l~~~ 246 (325)
T cd08264 212 E----VEEKVKEIT-KMADVVINSLGS-SFWDLSLSVLGRG 246 (325)
T ss_pred H----HHHHHHHHh-CCCCEEEECCCH-HHHHHHHHhhccC
Confidence 3 244556665 689999999998 4699999999998
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=252.16 Aligned_cols=242 Identities=24% Similarity=0.408 Sum_probs=202.6
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-----------CCCCCcccccceeEEEEEe
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----------EGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~Vv~~ 78 (291)
|||+++..+ ++++++++.|++.++||+||+.++++|+.|+..+.+... ...+|.++|+|++|+|+++
T Consensus 1 m~a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v 78 (341)
T cd08262 1 MRAAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDY 78 (341)
T ss_pred CceEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEe
Confidence 689998866 699999999999999999999999999999998877321 2235788999999999999
Q ss_pred CCCCCC-CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 79 GEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 79 G~~~~~-~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
|+++++ |++||+|+..+...|+.|..|..+... ...|+|++|+.++.
T Consensus 79 G~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~--------------------------------~~~g~~~~~~~v~~ 126 (341)
T cd08262 79 GPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSP--------------------------------EAPGGYAEYMLLSE 126 (341)
T ss_pred CCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCc--------------------------------CCCCceeeeEEech
Confidence 999987 999999999999999999999332100 01238999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.++++|+++++++++ ++.+++++|++ ....+++++++|||+|+|.+|.+++|+|+.+|+..++++++++++.+++++
T Consensus 127 ~~~~~lP~~~s~~~a~-~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~ 204 (341)
T cd08262 127 ALLLRVPDGLSMEDAA-LTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALA 204 (341)
T ss_pred HHeEECCCCCCHHHhh-hhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 9999999999998876 56688899987 477889999999999889999999999999999678889889999999999
Q ss_pred cCCCEEeCCCCCCc--hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDK--PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~--~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++++.... .+. .+.....+ ++|++||++|+...+..++++++++
T Consensus 205 ~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 257 (341)
T cd08262 205 MGADIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGLIQQIIEGAPPG 257 (341)
T ss_pred cCCcEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 99988888765211 222 34444444 8999999999866688899999887
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=250.18 Aligned_cols=253 Identities=32% Similarity=0.492 Sum_probs=219.9
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
|||+++..++ ..+++++++.|.|.++|++||+.++++|++|+.++.+..+. ...|.++|||++|+|+++|++++.|++
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~~ 80 (341)
T cd08297 1 MKAAVVEEFGEKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKV 80 (341)
T ss_pred CceEEeeccCCCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCCC
Confidence 7899998776 45999999999999999999999999999999988776543 245678999999999999999999999
Q ss_pred CCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 88 GDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 88 Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
||+|+..+. ..|+.|.+|..++.++|++... .|+. . .|+|++|+.++.+.++++|++
T Consensus 81 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~s~~~~~~~~~~~lp~~ 138 (341)
T cd08297 81 GDRVGVKWLYDACGKCEYCRTGDETLCPNQKN---SGYT-V------------------DGTFAEYAIADARYVTPIPDG 138 (341)
T ss_pred CCEEEEecCCCCCCCCccccCCCcccCCCccc---cccc-c------------------CCcceeEEEeccccEEECCCC
Confidence 999998764 6799999999999999987533 2221 1 248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.+++.+.|||+++.. ..+++++++||+|+ +.+|++++++|+++|+ +|+++.+++++.++++++|++.+++
T Consensus 139 ~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~v~~ 216 (341)
T cd08297 139 LSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGL-RVIAIDVGDEKLELAKELGADAFVD 216 (341)
T ss_pred CCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCcEEEc
Confidence 9999999999999999998654 58899999999988 6799999999999999 8999999999999999999999888
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++. .++.+.+.+++++ ++|++||+.+....+..++++++++
T Consensus 217 ~~~--~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~ 258 (341)
T cd08297 217 FKK--SDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPG 258 (341)
T ss_pred CCC--ccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcC
Confidence 765 3577777877765 8999999888778899999999887
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=249.14 Aligned_cols=238 Identities=26% Similarity=0.443 Sum_probs=202.9
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++ ++++++++.|.+.++||+||+.++++|++|+.++.+..+ +|.++|||++|+|+++|+. +++||
T Consensus 1 ~~a~~~~~~~-~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~ 73 (319)
T cd08242 1 MKALVLDGGL-DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGK 73 (319)
T ss_pred CeeEEEeCCC-cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCC
Confidence 6899999875 599999999999999999999999999999999887654 5789999999999999987 68999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|...+..+|+.|.+|..+..+.|..... .+....+ |+|++|+.++.+.++++|++++.
T Consensus 74 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~------------------g~~~~~~~v~~~~~~~lP~~~~~ 132 (319)
T cd08242 74 RVVGEINIACGRCEYCRRGLYTHCPNRTV---LGIVDRD------------------GAFAEYLTLPLENLHVVPDLVPD 132 (319)
T ss_pred eEEECCCcCCCCChhhhCcCcccCCCCcc---cCccCCC------------------CceEEEEEechHHeEECcCCCCH
Confidence 99999988999999999999888886543 2211112 49999999999999999999998
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+ .+..++|. +.+..+++++++|||+|+|.+|++++|+|+.+|+ +|++++.+++++++++++|++.+++++..
T Consensus 133 ~~aa~~-~~~~~~~~-~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~-~vi~~~~~~~~~~~~~~~g~~~~~~~~~~ 209 (319)
T cd08242 133 EQAVFA-EPLAAALE-ILEQVPITPGDKVAVLGDGKLGLLIAQVLALTGP-DVVLVGRHSEKLALARRLGVETVLPDEAE 209 (319)
T ss_pred HHhhhh-hHHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHcCCcEEeCcccc
Confidence 888764 34556665 4477889999999999889999999999999999 69999999999999999999887776431
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..++++|++|||+|+...+..++++++++
T Consensus 210 ----------~~~~~~d~vid~~g~~~~~~~~~~~l~~~ 238 (319)
T cd08242 210 ----------SEGGGFDVVVEATGSPSGLELALRLVRPR 238 (319)
T ss_pred ----------ccCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 12238999999999877899999999887
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=248.65 Aligned_cols=244 Identities=29% Similarity=0.442 Sum_probs=214.0
Q ss_pred eeEEEEecCCC----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 10 CKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 10 ~~a~~~~~~~~----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
||++++.+++. ++++.+.+.|.+.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+.+++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRF 80 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence 68999998883 58888888888999999999999999999999988876555668899999999999999999999
Q ss_pred CCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 86 QPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 86 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
++||+|++.+- .+|++|.+|..+++++|+.... .|+. .+ |.|++|+.++.+.++++|
T Consensus 81 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~------------------g~~~~~~~~~~~~~~~lp 138 (329)
T cd08298 81 SVGDRVGVPWLGSTCGECRYCRSGRENLCDNARF---TGYT-VD------------------GGYAEYMVADERFAYPIP 138 (329)
T ss_pred cCCCEEEEeccCCCCCCChhHhCcChhhCCCccc---cccc-cC------------------CceEEEEEecchhEEECC
Confidence 99999987554 5789999999999999997754 2222 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++.+++.+.+++.|+|+++ ...+++++++++|+|+|++|+++++++++.|+ +|+++..++++++.++++|++.++
T Consensus 139 ~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 216 (329)
T cd08298 139 EDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQGA-EVFAFTRSGEHQELARELGADWAG 216 (329)
T ss_pred CCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEcCChHHHHHHHHhCCcEEe
Confidence 9999999999999999999987 88899999999999999999999999999998 899999999999999999998877
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.. ..+++|+++++.+....++.++++++++
T Consensus 217 ~~~~~-----------~~~~vD~vi~~~~~~~~~~~~~~~l~~~ 249 (329)
T cd08298 217 DSDDL-----------PPEPLDAAIIFAPVGALVPAALRAVKKG 249 (329)
T ss_pred ccCcc-----------CCCcccEEEEcCCcHHHHHHHHHHhhcC
Confidence 76531 1237999999987777899999999988
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=249.84 Aligned_cols=250 Identities=32% Similarity=0.521 Sum_probs=216.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+.+. +.+++.+.|++.++||+||+.++++|+.|+....+.+. ...|.++|+|++|+|+++|+.++.|++||
T Consensus 1 ~~a~~~~~~~~-l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd 78 (343)
T cd08236 1 MKALVLTGPGD-LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGD 78 (343)
T ss_pred CeeEEEecCCc-eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCC
Confidence 68999998865 99999999999999999999999999999988877652 24578899999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+...|+.|.+|..+....|+.... .|. ...|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------~~~g~~~~~~~~~~~~~~~lP~~~~~ 136 (343)
T cd08236 79 RVAVNPLLPCGKCEYCKKGEYSLCSNYDY---IGS-------------------RRDGAFAEYVSVPARNLIKIPDHVDY 136 (343)
T ss_pred EEEEcCCCCCCCChhHHCcChhhCCCcce---Eec-------------------ccCCcccceEEechHHeEECcCCCCH
Confidence 99999888999999999999888886532 111 12349999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++++.+ ..+.++|+++. ...++++++|+|+|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++.+++++.
T Consensus 137 ~~aa~~-~~~~ta~~~l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~- 213 (343)
T cd08236 137 EEAAMI-EPAAVALHAVR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE- 213 (343)
T ss_pred HHHHhc-chHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc-
Confidence 998887 57889999874 778899999999988999999999999999954999988999999999999988888765
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .+.+.+..++ ++|++|||+|....+..++++|+++
T Consensus 214 -~~-~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 251 (343)
T cd08236 214 -ED-VEKVRELTEGRGADLVIEAAGSPATIEQALALARPG 251 (343)
T ss_pred -cc-HHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 33 5566666665 7999999999877899999999988
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=248.85 Aligned_cols=203 Identities=28% Similarity=0.443 Sum_probs=171.7
Q ss_pred ccccceeEEEEEeCCCCC------CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCc
Q 022865 66 ILGHEAAGIVESVGEGVT------EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKP 139 (291)
Q Consensus 66 ~~G~e~~G~Vv~~G~~~~------~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~ 139 (291)
++|||++|+|+++|+.++ +|++||||++.+..+|+.|.+|+.++.+.|++... .|....++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~~---------- 67 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRK---YGHEALDS---------- 67 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhh---cCcccccC----------
Confidence 589999999999999998 89999999999999999999999999999987543 22110000
Q ss_pred eecccCCcceeeeEEeccc-ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC
Q 022865 140 IYHFMGTSTFSQYTVVHDV-SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG 218 (291)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~-~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g 218 (291)
.....|+|+||+.++.+ .++++|++++++.++.+.+...|+|+++ +.....++++|||+|+|++|++++|+||++|
T Consensus 68 --~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G 144 (280)
T TIGR03366 68 --GWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAAL-EAAGDLKGRRVLVVGAGMLGLTAAAAAAAAG 144 (280)
T ss_pred --CccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHH-HhccCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 00112499999999987 7999999999999999998999999976 4455669999999999999999999999999
Q ss_pred CCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 219 ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 219 ~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+|++++.+++|+++++++|++.+++.+. ..+.+.+++++ ++|++||++|.+..++.++++++++
T Consensus 145 ~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~----~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~ 211 (280)
T TIGR03366 145 AARVVAADPSPDRRELALSFGATALAEPEV----LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVG 211 (280)
T ss_pred CCEEEEECCCHHHHHHHHHcCCcEecCchh----hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCC
Confidence 966999999999999999999998887643 23456666666 8999999999988899999999998
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-33 Score=248.41 Aligned_cols=225 Identities=24% Similarity=0.311 Sum_probs=197.3
Q ss_pred eeEEEEecCCCC---eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCC
Q 022865 10 CKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
|||+++.+++.+ +++++++.|.+.++||+||+.++++|++|+..+.|.++ ...+|.++|||++|+|+++|+++++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 689999877653 78899999999999999999999999999999888654 23568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... .|+|++|+.++...++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~ip~ 111 (324)
T cd08292 81 QVGQRVAVAPV-------------------------------------------------HGTWAEYFVAPADGLVPLPD 111 (324)
T ss_pred CCCCEEEeccC-------------------------------------------------CCcceeEEEEchHHeEECCC
Confidence 99999974421 13899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++++++.+++.+.++|+++ ....++++++|||+|+ |.+|++++|+|+++|+ +++++..++++.+.++++|++.++
T Consensus 112 ~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (324)
T cd08292 112 GISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGI-NVINLVRRDAGVAELRALGIGPVV 189 (324)
T ss_pred CCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHhcCCCEEE
Confidence 999999999988889999876 5578999999999987 9999999999999999 788888888888888889998888
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+..+ .++.+.+.+++++ ++|+||||+|+. .+..++++++++
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~ 231 (324)
T cd08292 190 STEQ--PGWQDKVREAAGGAPISVALDSVGGK-LAGELLSLLGEG 231 (324)
T ss_pred cCCC--chHHHHHHHHhCCCCCcEEEECCCCh-hHHHHHHhhcCC
Confidence 7765 5677788888877 999999999985 578999999888
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=245.17 Aligned_cols=252 Identities=31% Similarity=0.539 Sum_probs=214.1
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+++ +.+++++++.|.+.+++|+||+.++++|++|+..+.+.+.....|.++|+|++|+|+++|++++.|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~G 80 (306)
T cd08258 1 MKALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVG 80 (306)
T ss_pred CeeEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCC
Confidence 5788888755 359999999999999999999999999999998888776444567899999999999999999999999
Q ss_pred CEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|+.... .+|+.|.+|..+..+.|+.... .|+. ..|+|++|+.++.+.++++|+++
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~v~~~~~~~lp~~~ 138 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKG---IGTQ-------------------ADGGFAEYVLVPEESLHELPENL 138 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCce---eeec-------------------CCCceEEEEEcchHHeEECcCCC
Confidence 99998875 6899999999999999986432 2211 12499999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE--cCChhhHHHHHhcCCCEEeC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI--DIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~--~~~~~~~~~~~~~ga~~~i~ 245 (291)
++++++ +.....++|+++.....++++++|||.|+|.+|.+++|+|+++|+ +|+.+ ++++++.++++++|++++ +
T Consensus 139 ~~~~aa-~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~-~v~~~~~~~~~~~~~~~~~~g~~~~-~ 215 (306)
T cd08258 139 SLEAAA-LTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGA-TVVVVGTEKDEVRLDVAKELGADAV-N 215 (306)
T ss_pred CHHHHH-hhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEECCCCCHHHHHHHHHhCCccc-C
Confidence 999887 666888999988888889999999998889999999999999999 67765 345668888899999877 6
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.. .++.+.+.++..+ ++|++||++|....+..++++|+++
T Consensus 216 ~~~--~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 257 (306)
T cd08258 216 GGE--EDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKG 257 (306)
T ss_pred CCc--CCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 654 5677777777765 8999999998777899999999988
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=250.71 Aligned_cols=213 Identities=20% Similarity=0.272 Sum_probs=179.4
Q ss_pred eEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCC---CCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 022865 22 LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (291)
Q Consensus 22 ~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~---~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~ 97 (291)
+++++.+.|.| .++||||||+++|||+.|+..+... ....++|.++|||++|+|+++|+.+++|++||+|+...
T Consensus 23 ~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 100 (345)
T cd08293 23 FRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFN-- 100 (345)
T ss_pred eEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecC--
Confidence 88999999987 4999999999999999986433211 11235678999999999999999999999999997321
Q ss_pred CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh----hh
Q 022865 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK----VC 173 (291)
Q Consensus 98 ~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~----aa 173 (291)
+.|++|+.++.+.++++|+++++.+ ++
T Consensus 101 -------------------------------------------------~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a 131 (345)
T cd08293 101 -------------------------------------------------WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLG 131 (345)
T ss_pred -------------------------------------------------CCceeEEEecHHHeEEcCccccccchhHHhh
Confidence 1799999999999999999864432 44
Q ss_pred hhcccchhhhhhhhhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCC
Q 022865 174 LLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH 249 (291)
Q Consensus 174 ~l~~~~~ta~~~~~~~~~~~~g--~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~ 249 (291)
.+++++.|+|+++.+..+++++ ++|||+|+ |++|++++|+|+++|+.+|+++++++++.+++++ +|++.++++.+
T Consensus 132 ~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~- 210 (345)
T cd08293 132 AVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKT- 210 (345)
T ss_pred hcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCC-
Confidence 5677899999988777788876 99999987 9999999999999998679999999999998876 99999998765
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+++++++++|++||++|+.. +..++++|+++
T Consensus 211 -~~~~~~i~~~~~~gvd~vid~~g~~~-~~~~~~~l~~~ 247 (345)
T cd08293 211 -DNVAERLRELCPEGVDVYFDNVGGEI-SDTVISQMNEN 247 (345)
T ss_pred -CCHHHHHHHHCCCCceEEEECCCcHH-HHHHHHHhccC
Confidence 56777788877668999999999865 79999999998
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-32 Score=247.89 Aligned_cols=251 Identities=32% Similarity=0.472 Sum_probs=210.6
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||++++..++..+++.+.+.|.|.++|++||+.++++|+.|+.++.+.. ....+|.++|||++|+|+.+|++++.|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~ 80 (341)
T cd05281 1 MKAIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVK 80 (341)
T ss_pred CcceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCC
Confidence 6889999888779999999999999999999999999999988754421 1224567899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+.++|+.|.+|..+..++|... .. .|. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~-------------------~~~g~~~~~v~v~~~~~~~lP~~ 138 (341)
T cd05281 81 VGDYVSAETHIVCGKCYQCRTGNYHVCQNT-KI--LGV-------------------DTDGCFAEYVVVPEENLWKNDKD 138 (341)
T ss_pred CCCEEEECCccCCCCChHHHCcCcccCccc-ce--Eec-------------------cCCCcceEEEEechHHcEECcCC
Confidence 999999998899999999999999999753 21 111 11348999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++++.+ +++..+.++++++. ...+++++|+|.|+|.+|++++|+|+++|+.+|++++++++|.++++++|+++++++
T Consensus 139 ~~~~~a-~~~~~~~~a~~~~~--~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~ 215 (341)
T cd05281 139 IPPEIA-SIQEPLGNAVHTVL--AGDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINP 215 (341)
T ss_pred CCHHHh-hhhhHHHHHHHHHH--hcCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCc
Confidence 998554 55567788887653 455789999998889999999999999998668888889999999999999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++. .+.++.++ ++|++|||+|....+..++++|+++
T Consensus 216 ~~--~~~~-~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 255 (341)
T cd05281 216 RE--EDVV-EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPG 255 (341)
T ss_pred cc--ccHH-HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 54 4555 67776665 8999999999888889999999987
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-32 Score=244.35 Aligned_cols=253 Identities=28% Similarity=0.418 Sum_probs=215.7
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+. .+++.+.+.|.+.+++|+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++|+.+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 68898884433 3777788888889999999999999999999988876542 25678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+..+|+.|.+|..++.+.|+.... .|.. . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~------------------~g~~~~~~~~~~~~~~~~p~~ 138 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGI---LGEH-V------------------DGGYAEYVAVPARNLLPIPDN 138 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccc---cccc-c------------------CcceeEEEEechHHceeCCCC
Confidence 99999999999999999999999999997532 2211 1 248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.+++++.++|+++.....+.++++++|+|+ +.+|++++++++.+|+ +|+.+++++++++.+++++.+..++
T Consensus 139 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~ 217 (342)
T cd08266 139 LSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGA-TVIATAGSEDKLERAKELGADYVID 217 (342)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCeEEe
Confidence 9999999998899999998877888999999999988 7999999999999999 7899989999999998888877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+.+.+ ++|++++++|.. .+..++++++++
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~~i~~~g~~-~~~~~~~~l~~~ 258 (342)
T cd08266 218 YRK--EDFVREVRELTGKRGVDVVVEHVGAA-TWEKSLKSLARG 258 (342)
T ss_pred cCC--hHHHHHHHHHhCCCCCcEEEECCcHH-HHHHHHHHhhcC
Confidence 543 4555666666655 899999999985 488899999888
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-32 Score=244.10 Aligned_cols=250 Identities=32% Similarity=0.487 Sum_probs=213.4
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.+++. +++.+.+.|++.++||+||++++++|+.|+....|..+. .+|.++|+|++|+|+++|+.+++|++||
T Consensus 1 ~~a~~~~~~~~-~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd 78 (334)
T cd08234 1 MKALVYEGPGE-LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGD 78 (334)
T ss_pred CeeEEecCCCc-eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCC
Confidence 68999998874 999999999999999999999999999999988887653 3778999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
+|+..+...|+.|.+|..+..+.|..... +|.. . .|+|++|+.++.+.++++|+++++
T Consensus 79 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~------------------~g~~~~~~~v~~~~~~~lP~~~~~ 136 (334)
T cd08234 79 RVAVDPNIYCGECFYCRRGRPNLCENLTA---VGVT-R------------------NGGFAEYVVVPAKQVYKIPDNLSF 136 (334)
T ss_pred EEEEcCCcCCCCCccccCcChhhCCCcce---eccC-C------------------CCcceeEEEecHHHcEECcCCCCH
Confidence 99998888899999999998888887642 2111 1 248999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
.+++.+ .++.++++++ ...+++++++|+|+|+|.+|.+++++|+++|+.+|+++++++++.++++++|++.+++++.
T Consensus 137 ~~aa~~-~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 213 (334)
T cd08234 137 EEAALA-EPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR- 213 (334)
T ss_pred HHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC-
Confidence 988766 6778888877 7788999999999988999999999999999955888999999999999999988887765
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++... +...++++|++||++|....+..++++|+++
T Consensus 214 -~~~~~~-~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~ 250 (334)
T cd08234 214 -EDPEAQ-KEDNPYGFDVVIEATGVPKTLEQAIEYARRG 250 (334)
T ss_pred -CCHHHH-HHhcCCCCcEEEECCCChHHHHHHHHHHhcC
Confidence 233333 3233348999999999877899999999987
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-31 Score=242.23 Aligned_cols=248 Identities=31% Similarity=0.466 Sum_probs=213.1
Q ss_pred eEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~ 90 (291)
||+++.++|..+++++.+.|.+.+++++||+.++++|++|+..+.+......+|.++|||++|+|+++|+++++|++||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~ 80 (330)
T cd08245 1 KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDR 80 (330)
T ss_pred CeEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCE
Confidence 68899988767999999999999999999999999999999998887654456889999999999999999999999999
Q ss_pred EeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCCh
Q 022865 91 VIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPL 169 (291)
Q Consensus 91 V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~ 169 (291)
|++.+. ..|++|.+|..+..+.|++.... +.. . .|+|++|+.++.+.++++|+++++
T Consensus 81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~------------------~g~~~~~~~v~~~~~~~~p~~~~~ 138 (330)
T cd08245 81 VGVGWLVGSCGRCEYCRRGLENLCQKAVNT---GYT-T------------------QGGYAEYMVADAEYTVLLPDGLPL 138 (330)
T ss_pred EEEccccCCCCCChhhhCcCcccCcCcccc---Ccc-c------------------CCccccEEEEcHHHeEECCCCCCH
Confidence 987554 56999999999999999985431 111 1 248999999999999999999999
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
.+++.+.+.+.++|+++.. ..+.++++|+|+|+|.+|++++++|+.+|+ +|++++++++++++++++|++.+++...
T Consensus 139 ~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~- 215 (330)
T cd08245 139 AQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGF-ETVAITRSPDKRELARKLGADEVVDSGA- 215 (330)
T ss_pred HHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCcEEeccCC-
Confidence 9999999999999998744 788999999999888899999999999999 8999999999999999999988887654
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
...... ..+++|++||+++....+..++++++.+
T Consensus 216 -~~~~~~----~~~~~d~vi~~~~~~~~~~~~~~~l~~~ 249 (330)
T cd08245 216 -ELDEQA----AAGGADVILVTVVSGAAAEAALGGLRRG 249 (330)
T ss_pred -cchHHh----ccCCCCEEEECCCcHHHHHHHHHhcccC
Confidence 222111 2247999999999878899999999887
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=230.96 Aligned_cols=233 Identities=24% Similarity=0.349 Sum_probs=194.0
Q ss_pred CcccceeEEEEecCCCC---eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCC
Q 022865 5 GQVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~ 80 (291)
..+...|+++++..|+| ++++++++|.+..++|+||.+|+.|||+|+..++|.++.. ++|.+-|+|++|+|+.+|+
T Consensus 15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs 94 (354)
T KOG0025|consen 15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS 94 (354)
T ss_pred ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence 45688999999998886 7788999998877779999999999999999999999755 7899999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
.++.|++||+|+.... +.|+|++|...+.+.+
T Consensus 95 ~vkgfk~Gd~VIp~~a------------------------------------------------~lGtW~t~~v~~e~~L 126 (354)
T KOG0025|consen 95 NVKGFKPGDWVIPLSA------------------------------------------------NLGTWRTEAVFSESDL 126 (354)
T ss_pred CcCccCCCCeEeecCC------------------------------------------------CCccceeeEeecccce
Confidence 9999999999986643 2349999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----H
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----A 235 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~----~ 235 (291)
+++++.++++.||.+.++..|||+.+....++++|++|+-.|+ +.+|.+.+|+||++|+ +.+.+.++....+. +
T Consensus 127 i~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~Gi-ktinvVRdR~~ieel~~~L 205 (354)
T KOG0025|consen 127 IKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGI-KTINVVRDRPNIEELKKQL 205 (354)
T ss_pred EEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCc-ceEEEeecCccHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 9999999999999999 45555466544433 3
Q ss_pred HhcCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 236 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 236 ~~~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+||++++-..+. +.++..... .+....+.|||+|+.+ .....+.|.+||
T Consensus 206 k~lGA~~ViTeeel~~~~~~k~~~--~~~~prLalNcVGGks-a~~iar~L~~Gg 257 (354)
T KOG0025|consen 206 KSLGATEVITEEELRDRKMKKFKG--DNPRPRLALNCVGGKS-ATEIARYLERGG 257 (354)
T ss_pred HHcCCceEecHHHhcchhhhhhhc--cCCCceEEEeccCchh-HHHHHHHHhcCc
Confidence 56999999864331 112211111 1237899999999977 566777788873
|
|
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=244.02 Aligned_cols=230 Identities=21% Similarity=0.283 Sum_probs=195.3
Q ss_pred eEEEEecC---CC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 11 KAAVAWEP---NK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 11 ~a~~~~~~---~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
||+++..+ +. .+++.++|.|+|+++||+||++++++|+.|+.++.+..+...+|.++|+|++|+|+++|+.++.|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLF 80 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 46666665 33 38888999999999999999999999999999887765544568899999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... ....|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~----------------------------------------------~~~~g~~~~~~~v~~~~~~~ip~ 114 (336)
T TIGR02817 81 KPGDEVWYAGD----------------------------------------------IDRPGSNAEFHLVDERIVGHKPK 114 (336)
T ss_pred CCCCEEEEcCC----------------------------------------------CCCCCcccceEEEcHHHcccCCC
Confidence 99999974311 00123899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~-----g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ 238 (291)
++++++++.+++++.|+|+++....++++ +++|||+|+ |.+|++++|+|+.+ |+ +|+++.+++++.++++++
T Consensus 115 ~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~-~vi~~~~~~~~~~~l~~~ 193 (336)
T TIGR02817 115 SLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGL-TVIATASRPESQEWVLEL 193 (336)
T ss_pred CCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCC-EEEEEcCcHHHHHHHHHc
Confidence 99999999999999999998877788776 999999987 99999999999998 98 899998999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
|+++++++.. ++.+.+.+..++++|+++|++++...+..++++++++ |+
T Consensus 194 g~~~~~~~~~---~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~-G~ 242 (336)
T TIGR02817 194 GAHHVIDHSK---PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQ-GR 242 (336)
T ss_pred CCCEEEECCC---CHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccC-CE
Confidence 9999887543 4556666654448999999988777799999999888 53
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-31 Score=242.11 Aligned_cols=249 Identities=29% Similarity=0.483 Sum_probs=203.7
Q ss_pred EEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhc-CCCC--CCCCCcccccceeEEEEEeCCCCCCCCCCCE
Q 022865 14 VAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GKDP--EGLFPCILGHEAAGIVESVGEGVTEVQPGDH 90 (291)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~ 90 (291)
++++.+. +++++.+.|.++++||+||+.++++|++|+.... +... ...+|.++|+|++|+|+++|+.+++|++||+
T Consensus 2 ~~~~~~~-~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~ 80 (339)
T cd08232 2 VIHAAGD-LRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQR 80 (339)
T ss_pred eeccCCc-eEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCE
Confidence 4556654 9999999999999999999999999999988763 3221 1245778999999999999999999999999
Q ss_pred EeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChh
Q 022865 91 VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLD 170 (291)
Q Consensus 91 V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~ 170 (291)
|+..+...|++|.+|..|..+.|..... ++....+ ....|+|++|+.++.+.++++|++++++
T Consensus 81 V~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--------------~~~~g~~~~~v~v~~~~~~~iP~~~~~~ 143 (339)
T cd08232 81 VAVNPSRPCGTCDYCRAGRPNLCLNMRF---LGSAMRF--------------PHVQGGFREYLVVDASQCVPLPDGLSLR 143 (339)
T ss_pred EEEccCCcCCCChHHhCcCcccCccccc---eeecccc--------------CCCCCceeeEEEechHHeEECcCCCCHH
Confidence 9999989999999999999999997532 1110000 0123499999999999999999999999
Q ss_pred hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCC
Q 022865 171 KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD 250 (291)
Q Consensus 171 ~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~ 250 (291)
+++. ..++.++|+++...... ++++|||.|+|.+|.+++|+|+.+|+.+|+++++++++.++++++|++++++++.
T Consensus 144 ~aa~-~~~~~~a~~~l~~~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~-- 219 (339)
T cd08232 144 RAAL-AEPLAVALHAVNRAGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR-- 219 (339)
T ss_pred Hhhh-cchHHHHHHHHHhcCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc--
Confidence 8875 56888999887555555 8999999888999999999999999867899989999999999999988888764
Q ss_pred chHHHHHHhhc-C-CCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 251 KPIQQVLVDLT-D-GGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 251 ~~~~~~v~~~~-~-gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++ .++. . +++|++||++|....+..++++|+++
T Consensus 220 ~~~----~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~ 255 (339)
T cd08232 220 DPL----AAYAADKGDFDVVFEASGAPAALASALRVVRPG 255 (339)
T ss_pred hhh----hhhhccCCCccEEEECCCCHHHHHHHHHHHhcC
Confidence 222 2222 2 26999999999877799999999988
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=241.13 Aligned_cols=218 Identities=22% Similarity=0.258 Sum_probs=185.2
Q ss_pred ceeEEEEecC--CC----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 9 TCKAAVAWEP--NK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 9 ~~~a~~~~~~--~~----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
+||++++..+ +. .+++++++.|.|+++||||||++++||+.|..+... ...+|.++|+|++|+|++ .+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CC
Confidence 6899999883 33 388999999999999999999999999987653221 124688999999999995 34
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc---c
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV---S 159 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~ 159 (291)
+.|++||+|+.. +.|++|+.++.+ .
T Consensus 76 ~~~~~Gd~V~~~----------------------------------------------------~~~~~~~~~~~~~~~~ 103 (329)
T cd08294 76 SKFPVGTIVVAS----------------------------------------------------FGWRTHTVSDGKDQPD 103 (329)
T ss_pred CCCCCCCEEEee----------------------------------------------------CCeeeEEEECCccccc
Confidence 579999999732 168899999999 9
Q ss_pred eEEcCCCCCh-----hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 160 VAKIDPQAPL-----DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 160 ~~~iP~~~~~-----~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
++++|++++. ..++.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++.+
T Consensus 104 ~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~-~vi~~~~s~~~~~ 182 (329)
T cd08294 104 LYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGC-KVIGCAGSDDKVA 182 (329)
T ss_pred eEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHH
Confidence 9999999871 2234677899999999878888999999999986 9999999999999999 8999999999999
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++++|+++++++.+ .++.+.+++++++++|+|||++|+ ..+..++++++++
T Consensus 183 ~l~~~Ga~~vi~~~~--~~~~~~v~~~~~~gvd~vld~~g~-~~~~~~~~~l~~~ 234 (329)
T cd08294 183 WLKELGFDAVFNYKT--VSLEEALKEAAPDGIDCYFDNVGG-EFSSTVLSHMNDF 234 (329)
T ss_pred HHHHcCCCEEEeCCC--ccHHHHHHHHCCCCcEEEEECCCH-HHHHHHHHhhccC
Confidence 999999999998875 567777777776689999999998 5689999999988
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=241.74 Aligned_cols=247 Identities=30% Similarity=0.439 Sum_probs=208.8
Q ss_pred EecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 15 AWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
-.++++++++++.|.|.|.++|++||+.++++|+.|+..+.+.. ...++|.++|+|++|+|+++|+++++|++||+|
T Consensus 4 ~~~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 4 KTKPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cccCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 34677889999999999999999999999999999998765542 122457789999999999999999999999999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~ 171 (291)
+..+...|+.|-.|..+....|++.+. +|.. ..|+|++|+.++.+.++++|++++++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~ 141 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-------------------TDGCFAEYAVVPAQNIWKNPKSIPPEY 141 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcce---Eeec-------------------CCCcceeEEEeehHHcEECcCCCChHh
Confidence 999989999999999999999998643 1211 124899999999999999999999865
Q ss_pred hhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCc
Q 022865 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (291)
Q Consensus 172 aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~ 251 (291)
+ +++.++.++++++ ....+++++++|.|+|.+|.+++|+|+.+|++.|+++++++++.++++++|++.++++.. .
T Consensus 142 a-~~~~~~~~a~~~~--~~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~--~ 216 (340)
T TIGR00692 142 A-TIQEPLGNAVHTV--LAGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK--E 216 (340)
T ss_pred h-hhcchHHHHHHHH--HccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc--c
Confidence 5 4666888888765 345678999999888999999999999999955888888899999999999988887755 5
Q ss_pred hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 252 PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 252 ~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.+.+.++.++ ++|++|||+|....+..++++|+++
T Consensus 217 ~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~ 254 (340)
T TIGR00692 217 DVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPG 254 (340)
T ss_pred CHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCC
Confidence 677777777765 8999999999878899999999987
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-31 Score=243.23 Aligned_cols=227 Identities=26% Similarity=0.342 Sum_probs=189.7
Q ss_pred ccceeEEEEecCCC-CeEEEeeec----CCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccce--eEEEEEe
Q 022865 7 VITCKAAVAWEPNK-PLVIEDVQV----APPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEA--AGIVESV 78 (291)
Q Consensus 7 ~~~~~a~~~~~~~~-~~~~~~~~~----~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~Vv~~ 78 (291)
...+|++....++. .|++.+.++ |+|+++||||||++++||+.|+..+.|.... ...|+++|++. .|.+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v 84 (338)
T cd08295 5 QVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVV 84 (338)
T ss_pred EEEEecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEE
Confidence 35567777655554 489988877 7899999999999999999999988875432 24678899854 4566667
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc-
Q 022865 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD- 157 (291)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~- 157 (291)
|+.++.|++||+|+.. |+|+||+.++.
T Consensus 85 ~~~v~~~~vGd~V~~~----------------------------------------------------g~~aey~~v~~~ 112 (338)
T cd08295 85 DSGNPDFKVGDLVWGF----------------------------------------------------TGWEEYSLIPRG 112 (338)
T ss_pred ecCCCCCCCCCEEEec----------------------------------------------------CCceeEEEecch
Confidence 8888889999999622 27999999999
Q ss_pred cceEEcC-CCCChh-hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 022865 158 VSVAKID-PQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (291)
Q Consensus 158 ~~~~~iP-~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~ 234 (291)
..++++| +++++. +++.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++.+++++.++
T Consensus 113 ~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~-~Vi~~~~~~~~~~~ 191 (338)
T cd08295 113 QDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGC-YVVGSAGSDEKVDL 191 (338)
T ss_pred hceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHH
Confidence 7999995 678876 788899999999998878889999999999998 9999999999999999 89998899999999
Q ss_pred HHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 235 AKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 235 ~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++ +|++.++++.+. .++.+.+.+++++++|++||++|+ ..+..++++++++
T Consensus 192 ~~~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvd~v~d~~g~-~~~~~~~~~l~~~ 244 (338)
T cd08295 192 LKNKLGFDDAFNYKEE-PDLDAALKRYFPNGIDIYFDNVGG-KMLDAVLLNMNLH 244 (338)
T ss_pred HHHhcCCceeEEcCCc-ccHHHHHHHhCCCCcEEEEECCCH-HHHHHHHHHhccC
Confidence 998 999999886542 356666777765689999999998 5689999999998
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=241.39 Aligned_cols=229 Identities=22% Similarity=0.296 Sum_probs=187.4
Q ss_pred cccceeEEEEecCCC------CeEEEe---eecCC-CCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCccccc--ceeE
Q 022865 6 QVITCKAAVAWEPNK------PLVIED---VQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH--EAAG 73 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~------~~~~~~---~~~~~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G 73 (291)
++.+.|.+++....+ .|++++ ++.|. +++||||||+.++++|+.|+..+.+.......|.++|+ |++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G 84 (348)
T PLN03154 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFG 84 (348)
T ss_pred ccccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeE
Confidence 445678888864432 288876 46664 48999999999999999988654332222245889998 8899
Q ss_pred EEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeE
Q 022865 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 153 (291)
Q Consensus 74 ~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 153 (291)
+|..+|+.++.|++||+|+.. ++|++|.
T Consensus 85 ~v~~vg~~v~~~~~Gd~V~~~----------------------------------------------------~~~aey~ 112 (348)
T PLN03154 85 VSKVVDSDDPNFKPGDLISGI----------------------------------------------------TGWEEYS 112 (348)
T ss_pred EEEEEecCCCCCCCCCEEEec----------------------------------------------------CCcEEEE
Confidence 999999999999999999622 2799998
Q ss_pred Eeccc--ceEE--cCCCCChh-hhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 154 VVHDV--SVAK--IDPQAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 154 ~~~~~--~~~~--iP~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
.++.+ .+++ +|+++++. +++.+++++.|||+++.....+++|++|||+|+ |++|++++|+||++|+ +|+++++
T Consensus 113 ~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~-~Vi~~~~ 191 (348)
T PLN03154 113 LIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC-YVVGSAG 191 (348)
T ss_pred EEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcC
Confidence 88874 3544 48999986 677889999999999877888999999999998 9999999999999999 8999999
Q ss_pred ChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 228 DPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 228 ~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++++++++ ++|++.++++++. .++.+.+++.+++++|++||++|+. .+..++++++++|
T Consensus 192 ~~~k~~~~~~~lGa~~vi~~~~~-~~~~~~i~~~~~~gvD~v~d~vG~~-~~~~~~~~l~~~G 252 (348)
T PLN03154 192 SSQKVDLLKNKLGFDEAFNYKEE-PDLDAALKRYFPEGIDIYFDNVGGD-MLDAALLNMKIHG 252 (348)
T ss_pred CHHHHHHHHHhcCCCEEEECCCc-ccHHHHHHHHCCCCcEEEEECCCHH-HHHHHHHHhccCC
Confidence 999999987 7999999987641 3566677777666899999999984 6999999999983
|
|
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=240.43 Aligned_cols=229 Identities=26% Similarity=0.362 Sum_probs=194.9
Q ss_pred eeEEEEecCCCC---eEEEeeecCCCCC-CeEEEEEeeeecchhhhhhhcCCCCCC-C----CCcccccceeEEEEEeCC
Q 022865 10 CKAAVAWEPNKP---LVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSGKDPEG-L----FPCILGHEAAGIVESVGE 80 (291)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~~~~~~-~evlVkv~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~Vv~~G~ 80 (291)
|||+++...+.+ +.+++.|.|.|.+ ++|+||+.++++|++|+..+.+..+.. . +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 789999988775 8999999999887 999999999999999999988765422 2 577999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
.+..|++||+|+.... ..|+|++|+.++.+.+
T Consensus 81 ~v~~~~~Gd~V~~~~~------------------------------------------------~~g~~~~~~~v~~~~~ 112 (341)
T cd08290 81 GVKSLKPGDWVIPLRP------------------------------------------------GLGTWRTHAVVPADDL 112 (341)
T ss_pred CCCCCCCCCEEEecCC------------------------------------------------CCccchheEeccHHHe
Confidence 9999999999984421 0138999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHH
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRA 235 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----~~~~~~ 235 (291)
+++|+++++++++.+++.+.|+|+++.....++++++|||+|+ |.+|++++|+|+++|+ +++++..++ ++++++
T Consensus 113 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~ 191 (341)
T cd08290 113 IKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGI-KTINVVRDRPDLEELKERL 191 (341)
T ss_pred EeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCC-eEEEEEcCCCcchhHHHHH
Confidence 9999999999999999999999998877778999999999987 9999999999999999 677766655 678888
Q ss_pred HhcCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 236 KNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 236 ~~~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++|+++++++... ...+...+..+.++++|++|||+|+.. +..++++++++
T Consensus 192 ~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~-~~~~~~~l~~~ 244 (341)
T cd08290 192 KALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS-ATELARLLSPG 244 (341)
T ss_pred HhcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh-HHHHHHHhCCC
Confidence 89999998887541 015666677766558999999999865 67789999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-31 Score=237.39 Aligned_cols=228 Identities=25% Similarity=0.339 Sum_probs=200.1
Q ss_pred ceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
+||++++.++|.+ +++++++.|.|.++||+||+.++++|++|+....+.++...+|.++|||++|+|+++|+.++.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence 5899999987663 88889999999999999999999999999998887765445688999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... . .|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~------------------------------~------------------~g~~~~~v~v~~~~~~~lp~~ 112 (327)
T PRK10754 81 VGDRVVYAQS------------------------------A------------------LGAYSSVHNVPADKAAILPDA 112 (327)
T ss_pred CCCEEEECCC------------------------------C------------------CcceeeEEEcCHHHceeCCCC
Confidence 9999973211 0 138999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++++.+++.+.++|.++....+++++++++|+|+ |.+|++++++|+.+|+ +|++++.+++++++++++|++++++
T Consensus 113 ~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 9999999888899999998777788999999999975 9999999999999999 7899989999999999999988887
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+. .++.+.+++.+++ ++|++|||+|+. .+..++++++++
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~ 232 (327)
T PRK10754 192 YRE--ENIVERVKEITGGKKVRVVYDSVGKD-TWEASLDCLQRR 232 (327)
T ss_pred CCC--CcHHHHHHHHcCCCCeEEEEECCcHH-HHHHHHHHhccC
Confidence 664 5677778888876 899999999984 588899999887
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-31 Score=237.61 Aligned_cols=207 Identities=21% Similarity=0.275 Sum_probs=176.6
Q ss_pred CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 022865 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (291)
Q Consensus 21 ~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~ 100 (291)
.+++.+.+.|+|++|||||||+++++|+.|+. +.+.....|.++|.|++|+|++.|+ +|++||+|+..
T Consensus 18 ~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~------ 85 (325)
T TIGR02825 18 DFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKNV---ALPKGTIVLAS------ 85 (325)
T ss_pred ceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCCC---CCCCCCEEEEe------
Confidence 38889999999999999999999999997654 3333234578999999999999874 59999999732
Q ss_pred CChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc----CCCCChhhh-hhh
Q 022865 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI----DPQAPLDKV-CLL 175 (291)
Q Consensus 101 ~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i----P~~~~~~~a-a~l 175 (291)
++|++|+.++.+.+.++ |++++++++ +++
T Consensus 86 ----------------------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l 119 (325)
T TIGR02825 86 ----------------------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTV 119 (325)
T ss_pred ----------------------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhc
Confidence 15889999998888887 899999887 678
Q ss_pred cccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHH
Q 022865 176 GCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254 (291)
Q Consensus 176 ~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 254 (291)
++++.|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +|+++++++++.++++++|++.++++++. ..+.
T Consensus 120 ~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~-~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~-~~~~ 197 (325)
T TIGR02825 120 GMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKVAYLKKLGFDVAFNYKTV-KSLE 197 (325)
T ss_pred ccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEecccc-ccHH
Confidence 8899999998888899999999999986 9999999999999999 89999999999999999999999988652 2455
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+....++++|++||++|++. +..++++++++
T Consensus 198 ~~~~~~~~~gvdvv~d~~G~~~-~~~~~~~l~~~ 230 (325)
T TIGR02825 198 ETLKKASPDGYDCYFDNVGGEF-SNTVIGQMKKF 230 (325)
T ss_pred HHHHHhCCCCeEEEEECCCHHH-HHHHHHHhCcC
Confidence 5566665558999999999864 79999999998
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-30 Score=237.41 Aligned_cols=241 Identities=25% Similarity=0.282 Sum_probs=193.7
Q ss_pred eeEEEEecCCCC--eEEEe-eecCCCCCCeEEEEEeeeecchhhhhhhcCCCC--------------------CCCCCcc
Q 022865 10 CKAAVAWEPNKP--LVIED-VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------EGLFPCI 66 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~-~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------~~~~p~~ 66 (291)
||++++...+.+ +.+.+ ++.|.+.+++|+||+.++++|++|+.++.|.++ ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 688888876543 55544 577778999999999999999999998876542 2356889
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCC
Q 022865 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (291)
Q Consensus 67 ~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 146 (291)
+|||++|+|+++|+.+++|++||+|+..+..+|++|..|.. |. . .|.. .+
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~-----~~---~---~~~~-~~------------------ 130 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPAD-----ID---Y---IGSE-RD------------------ 130 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCcccccc-----cc---c---cCCC-CC------------------
Confidence 99999999999999999999999999888777777655321 11 0 1100 12
Q ss_pred cceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 022865 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (291)
Q Consensus 147 g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~ 225 (291)
|+|++|+.++.+.++++|+++++.+++.+++++.|+|+++ ....+++++++||+|+ |.+|++++++|+++|+ +++++
T Consensus 131 g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~vi~~ 208 (350)
T cd08274 131 GGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGA-IVIAV 208 (350)
T ss_pred ccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCC-EEEEE
Confidence 3899999999999999999999999999999999999976 7778999999999998 9999999999999999 68887
Q ss_pred cCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 226 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..++ ++++++++|++.+++... ..+.+ ...+.+ ++|++||++|+. .+..++++++++
T Consensus 209 ~~~~-~~~~~~~~g~~~~~~~~~--~~~~~--~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~ 266 (350)
T cd08274 209 AGAA-KEEAVRALGADTVILRDA--PLLAD--AKALGGEPVDVVADVVGGP-LFPDLLRLLRPG 266 (350)
T ss_pred eCch-hhHHHHhcCCeEEEeCCC--ccHHH--HHhhCCCCCcEEEecCCHH-HHHHHHHHhccC
Confidence 7665 888889999975554332 23333 444555 899999999985 589999999988
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.5e-31 Score=238.40 Aligned_cols=232 Identities=28% Similarity=0.364 Sum_probs=195.8
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++..++ +.+++++++.|.|+++||+||++++++|++|+....+.. ...+|.++|||++|+|+.+|+.++.|++|
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~G 79 (339)
T cd08249 1 QKAAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVG 79 (339)
T ss_pred CceEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCC
Confidence 6899999884 448999999999999999999999999999988775544 22356789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+......|+ + ....|+|++|+.++.+.++++|++++
T Consensus 80 d~V~~~~~~~~~----------------------~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~ 118 (339)
T cd08249 80 DRVAGFVHGGNP----------------------N-------------------DPRNGAFQEYVVADADLTAKIPDNIS 118 (339)
T ss_pred CEEEEEeccccC----------------------C-------------------CCCCCcccceEEechhheEECCCCCC
Confidence 999866432211 0 01124899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCC----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKV----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~----------~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.+++.+++.+.++|+++.....+ +++++++|+|+ |.+|++++++|+++|+ +|+.+. ++++++++++
T Consensus 119 ~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~-~v~~~~-~~~~~~~~~~ 196 (339)
T cd08249 119 FEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGY-KVITTA-SPKNFDLVKS 196 (339)
T ss_pred HHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCC-eEEEEE-CcccHHHHHh
Confidence 999999999999999987655544 78999999997 9999999999999999 787776 5688999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
+|++.+++... .++.+.+++++++++|++||++|++..+..+++++++
T Consensus 197 ~g~~~v~~~~~--~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~ 244 (339)
T cd08249 197 LGADAVFDYHD--PDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGR 244 (339)
T ss_pred cCCCEEEECCC--chHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhc
Confidence 99988888765 5677777777666899999999986679999999998
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-29 Score=228.79 Aligned_cols=228 Identities=24% Similarity=0.296 Sum_probs=195.5
Q ss_pred ceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 022865 9 TCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 9 ~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
+|||+++...++ .+++.+.+.|.+.++||+||+.++++|+.|+....+..+. ...|.++|||++|+|+++|+.++++
T Consensus 1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~ 80 (334)
T PTZ00354 1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF 80 (334)
T ss_pred CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence 689999998876 3667788888889999999999999999999988775532 2456789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... .|+|++|+.++.+.++++|+
T Consensus 81 ~~Gd~V~~~~~-------------------------------------------------~g~~~~~~~v~~~~~~~ip~ 111 (334)
T PTZ00354 81 KEGDRVMALLP-------------------------------------------------GGGYAEYAVAHKGHVMHIPQ 111 (334)
T ss_pred CCCCEEEEecC-------------------------------------------------CCceeeEEEecHHHcEeCCC
Confidence 99999974311 13899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++..++.+++++.++|+++.....++++++|+|+|+ |.+|++++++|+.+|+ +++.+.++++++++++++|++.++
T Consensus 112 ~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 190 (334)
T PTZ00354 112 GYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGA-ATIITTSSEEKVDFCKKLAAIILI 190 (334)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999998877788999999999986 9999999999999999 667788899999999999998888
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.... ..+.+.+.+.+++ ++|++||++|+ ..+..++++++++
T Consensus 191 ~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~ 233 (334)
T PTZ00354 191 RYPDE-EGFAPKVKKLTGEKGVNLVLDCVGG-SYLSETAEVLAVD 233 (334)
T ss_pred ecCCh-hHHHHHHHHHhCCCCceEEEECCch-HHHHHHHHHhccC
Confidence 76541 2266777777765 89999999987 4588999999887
|
|
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.6e-29 Score=226.76 Aligned_cols=248 Identities=26% Similarity=0.353 Sum_probs=204.6
Q ss_pred eeEEEEecCC--CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+ +.+++++.+.|.+.++|++||+.++++|++|+....+..+. ...|.++|||++|+|+++|+.+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 7899998664 34888888888899999999999999999999988776532 24678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+......|..+.+ ..|... . ..|. ...|+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~------~~~~~~-~--~~~~-------------------~~~g~~~~~~~~~~~~~~~lp~~ 132 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPP------TAEDEA-S--ALGG-------------------PIDGVLAEYVVLPEEGLVRAPDH 132 (336)
T ss_pred CCCEEEEecccccccccc------cccccc-c--cccc-------------------ccCceeeeEEEecHHHeEECCCC
Confidence 999999876655543322 222211 0 0111 11348999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.+++.+.+.+.++|+++.....++++++++|+|+|++|++++++++++|+ +|++++.+++++++++++|++.+++.
T Consensus 133 ~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 211 (336)
T cd08276 133 LSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGA-RVIATSSSDEKLERAKALGADHVINY 211 (336)
T ss_pred CCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEcC
Confidence 99999999999999999988777889999999999889999999999999999 79999999999999999999888876
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. ..++.+.+.+++++ ++|++||+++. ..+..+++++++.
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~d~~i~~~~~-~~~~~~~~~l~~~ 252 (336)
T cd08276 212 RT-TPDWGEEVLKLTGGRGVDHVVEVGGP-GTLAQSIKAVAPG 252 (336)
T ss_pred Cc-ccCHHHHHHHHcCCCCCcEEEECCCh-HHHHHHHHhhcCC
Confidence 53 14566778888776 89999999986 4588999999987
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=226.61 Aligned_cols=227 Identities=27% Similarity=0.349 Sum_probs=193.4
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++..++.+ +++.+.+.|.+.++||+||+.++++|++|+....|..+ ...+|.++|||++|+|+++|+.++.
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 689999876543 66677777778999999999999999999998877543 2356788999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+..... . .|+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~-----------------------------~------------------~g~~~~~~~v~~~~~~~lp 113 (324)
T cd08244 81 AWLGRRVVAHTGR-----------------------------A------------------GGGYAELAVADVDSLHPVP 113 (324)
T ss_pred CCCCCEEEEccCC-----------------------------C------------------CceeeEEEEEchHHeEeCC
Confidence 9999999854210 1 2389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
+++++.+++.+++.+.|+|. +.....++++++++|+|+ |.+|++++++|+.+|+ +|+++++++++.++++++|++.+
T Consensus 114 ~~~~~~~a~~~~~~~~ta~~-~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 114 DGLDLEAAVAVVHDGRTALG-LLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGA-TVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCHHHHhhhcchHHHHHH-HHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEE
Confidence 99999999999999999964 667788999999999986 9999999999999999 79999999999999999999888
Q ss_pred eCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.. .++.+.+.++.++ ++|+++|++|+.. ...++++++..
T Consensus 192 ~~~~~--~~~~~~~~~~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~ 234 (324)
T cd08244 192 VDYTR--PDWPDQVREALGGGGVTVVLDGVGGAI-GRAALALLAPG 234 (324)
T ss_pred EecCC--ccHHHHHHHHcCCCCceEEEECCChHh-HHHHHHHhccC
Confidence 87654 4566777777766 8999999999875 68899999887
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=221.41 Aligned_cols=223 Identities=34% Similarity=0.510 Sum_probs=190.7
Q ss_pred eEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCC
Q 022865 36 EVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (291)
Q Consensus 36 evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~ 114 (291)
||+||++++++|+.|+..+.+..+ ...+|.++|||++|+|+++|+.++.|++||+|+......|+.|..|.. .|+
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~----~~~ 76 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRE----LCP 76 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHh----hCC
Confidence 689999999999999999888764 345678999999999999999999999999999999999999999997 565
Q ss_pred CccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCC
Q 022865 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (291)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~ 194 (291)
.... .+ ....|+|++|+.++.+.++++|+++++++++.+++++.++|+++.....+.+
T Consensus 77 ~~~~---~~-------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 134 (271)
T cd05188 77 GGGI---LG-------------------EGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKP 134 (271)
T ss_pred CCCE---ec-------------------cccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCC
Confidence 4432 11 1123489999999999999999999999999999999999998877777789
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g 273 (291)
+++|||+|++++|++++++++.+|. +|+++++++++.++++++|++.+++... .++.+.+. ...+ ++|++||+++
T Consensus 135 ~~~vli~g~~~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~-~~~~~~~d~vi~~~~ 210 (271)
T cd05188 135 GDTVLVLGAGGVGLLAAQLAKAAGA-RVIVTDRSDEKLELAKELGADHVIDYKE--EDLEEELR-LTGGGGADVVIDAVG 210 (271)
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-eEEEEcCCHHHHHHHHHhCCceeccCCc--CCHHHHHH-HhcCCCCCEEEECCC
Confidence 9999999986699999999999997 8999999999999999999888887665 34444444 4444 8999999999
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
....+..++++++++
T Consensus 211 ~~~~~~~~~~~l~~~ 225 (271)
T cd05188 211 GPETLAQALRLLRPG 225 (271)
T ss_pred CHHHHHHHHHhcccC
Confidence 866689999999987
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=227.69 Aligned_cols=224 Identities=26% Similarity=0.297 Sum_probs=192.7
Q ss_pred ceeEEEEecCCC----CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 022865 9 TCKAAVAWEPNK----PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 9 ~~~a~~~~~~~~----~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
.|||+++..++. ++++++++.|.+.++|++||+.++++|+.|+....+.... ..+|.++|||++|+|+.+|+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~ 80 (329)
T cd08250 1 SFRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVT 80 (329)
T ss_pred CceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCC
Confidence 489999997654 5899999999999999999999999999999988776543 36788999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
++++||+|+... .|+|++|+.++.+.++++
T Consensus 81 ~~~~Gd~V~~~~--------------------------------------------------~g~~~s~~~v~~~~~~~i 110 (329)
T cd08250 81 DFKVGDAVATMS--------------------------------------------------FGAFAEYQVVPARHAVPV 110 (329)
T ss_pred CCCCCCEEEEec--------------------------------------------------CcceeEEEEechHHeEEC
Confidence 999999997431 138999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
|++. .+++.+++++.++|+++.+...+.++++++|+|+ |.+|++++++|+.+|+ +|+++.+++++.++++++|++.
T Consensus 111 p~~~--~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 187 (329)
T cd08250 111 PELK--PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGC-HVIGTCSSDEKAEFLKSLGCDR 187 (329)
T ss_pred CCCc--chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCC-eEEEEeCcHHHHHHHHHcCCce
Confidence 9973 4667788899999998877788999999999986 9999999999999999 7899889999999999999988
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++... .++.+.+.+..++++|++||++|+ ..+..++++++++
T Consensus 188 v~~~~~--~~~~~~~~~~~~~~vd~v~~~~g~-~~~~~~~~~l~~~ 230 (329)
T cd08250 188 PINYKT--EDLGEVLKKEYPKGVDVVYESVGG-EMFDTCVDNLALK 230 (329)
T ss_pred EEeCCC--ccHHHHHHHhcCCCCeEEEECCcH-HHHHHHHHHhccC
Confidence 877654 445556666554589999999997 5689999999887
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-29 Score=227.07 Aligned_cols=229 Identities=22% Similarity=0.251 Sum_probs=194.4
Q ss_pred eeEEEEecCCCC-----eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~-----~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++.++++. +..++++.|.+.+++++||+.++++|++|+..+.+..+..++|.++|||++|+|+++|+.+..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~ 80 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTL 80 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCC
Confidence 579999988763 666678888889999999999999999999988776553456778999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+...... .+ |+|++|+.++.+.++++|
T Consensus 81 ~~~Gd~V~~~~~~~----------------------------~~------------------g~~~~~~~v~~~~~~~ip 114 (336)
T cd08252 81 FKVGDEVYYAGDIT----------------------------RP------------------GSNAEYQLVDERIVGHKP 114 (336)
T ss_pred CCCCCEEEEcCCCC----------------------------CC------------------ccceEEEEEchHHeeeCC
Confidence 99999997432100 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCC-----CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEP-----GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~-----g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~ 237 (291)
+++++++++.+++.+.++|.++.+...+.+ +++|+|+|+ |.+|++++++|+.+| + +|+++++++++.+++++
T Consensus 115 ~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~-~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 115 KSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGL-TVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCc-EEEEEcCChhhHHHHHh
Confidence 999999999999999999998777777777 999999986 999999999999999 7 89999999999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|++.+++.+. ++.+.+.....+++|++||++|....+..++++++++
T Consensus 194 ~g~~~~~~~~~---~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~ 241 (336)
T cd08252 194 LGADHVINHHQ---DLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQ 241 (336)
T ss_pred cCCcEEEeCCc---cHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCC
Confidence 99988887653 3445555443348999999999877799999999988
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=229.54 Aligned_cols=226 Identities=23% Similarity=0.302 Sum_probs=189.0
Q ss_pred eeEEEEecCCCC---eEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCC---------------CCCCCcccccc
Q 022865 10 CKAAVAWEPNKP---LVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---------------EGLFPCILGHE 70 (291)
Q Consensus 10 ~~a~~~~~~~~~---~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e 70 (291)
|||+++..++++ +++++++.|.| .++||+||++++++|++|+..+.+... ...+|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 688998887775 88999999999 499999999999999999998877421 23568899999
Q ss_pred eeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCccee
Q 022865 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFS 150 (291)
Q Consensus 71 ~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~ 150 (291)
++|+|+++|+.+++|++||+|+..... +..|+|+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~----------------------------------------------~~~g~~~ 114 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPP----------------------------------------------WSQGTHA 114 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCC----------------------------------------------CCCccce
Confidence 999999999999999999999854320 1124899
Q ss_pred eeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCC----CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE
Q 022865 151 QYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP----GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI 225 (291)
Q Consensus 151 ~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~----g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~ 225 (291)
+|+.++.+.++++|+++++..++.+++.+.++|+++.....+.+ +++++|+|+ |.+|++++++|+++|+ +|+++
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~-~v~~~ 193 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGA-HVTTT 193 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEE
Confidence 99999999999999999999999999999999998767666654 999999986 9999999999999999 78877
Q ss_pred cCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 226 DIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 226 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++ ++.++++++|++.+++... .++.+.+... +++|++||++|.+ .+..++++++++
T Consensus 194 ~~~-~~~~~~~~~g~~~~~~~~~--~~~~~~l~~~--~~vd~vi~~~g~~-~~~~~~~~l~~~ 250 (350)
T cd08248 194 CST-DAIPLVKSLGADDVIDYNN--EDFEEELTER--GKFDVILDTVGGD-TEKWALKLLKKG 250 (350)
T ss_pred eCc-chHHHHHHhCCceEEECCC--hhHHHHHHhc--CCCCEEEECCChH-HHHHHHHHhccC
Confidence 654 6788889999988887654 3444444332 3799999999987 689999999988
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-29 Score=224.40 Aligned_cols=229 Identities=21% Similarity=0.246 Sum_probs=187.3
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..+++ +++++++|.|.+.++||+||+.++++|++|+..+.|..+. ..+|.++|||++|+|+++ .++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 68999998875 6999999999999999999999999999999988876532 245789999999999999 456799
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... ..|+ ...|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~------------------------~~g~-------------------~~~g~~~~~~~v~~~~~~~lp~~ 115 (325)
T cd05280 79 EGDEVLVTGY------------------------DLGM-------------------NTDGGFAEYVRVPADWVVPLPEG 115 (325)
T ss_pred CCCEEEEccc------------------------ccCC-------------------CCCceeEEEEEEchhhEEECCCC
Confidence 9999985421 0111 11248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcC--CC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAK--VE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~--~~-~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++.+++.+++.+.++|.++..... +. .+++|+|+|+ |.+|++++++|+.+|+ +|++++++++++++++++|++.
T Consensus 116 ~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (325)
T cd05280 116 LSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGY-TVVALTGKEEQADYLKSLGASE 194 (325)
T ss_pred CCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcE
Confidence 9999999999999999987654433 35 3579999998 9999999999999999 7999999999999999999988
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.+. . ..........+++|+|||++|.. .+..+++++++.
T Consensus 195 ~~~~~~--~-~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~ 236 (325)
T cd05280 195 VLDRED--L-LDESKKPLLKARWAGAIDTVGGD-VLANLLKQTKYG 236 (325)
T ss_pred EEcchh--H-HHHHHHHhcCCCccEEEECCchH-HHHHHHHhhcCC
Confidence 887643 1 11222223334799999999985 589999999887
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-29 Score=224.63 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=186.0
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-CCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...++ .+++++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.| ++.|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 78999998776 38889999999999999999999999999987664321 122458899999999999964 46799
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..... .|.. .+ |+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~~~-~~------------------g~~~~~~~v~~~~~~~~p~~ 115 (326)
T cd08289 79 PGDEVIVTSYD------------------------LGVS-HH------------------GGYSEYARVPAEWVVPLPKG 115 (326)
T ss_pred CCCEEEEcccc------------------------cCCC-CC------------------CcceeEEEEcHHHeEECCCC
Confidence 99999854310 1110 12 38999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhh--cC-CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNT--AK-VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~--~~-~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++++++.+++.+.|+|.++... .. ..++++|+|+|+ |.+|++++|+|+++|+ +|++++++++++++++++|++.
T Consensus 116 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~ 194 (326)
T cd08289 116 LTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGY-EVVASTGKADAADYLKKLGAKE 194 (326)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-eEEEEecCHHHHHHHHHcCCCE
Confidence 99999999999999998876432 22 335789999998 9999999999999999 8999999999999999999988
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.++ . ..+.+.++.++++|+|||++|+ ..+..++++++++
T Consensus 195 v~~~~~--~-~~~~~~~~~~~~~d~vld~~g~-~~~~~~~~~l~~~ 236 (326)
T cd08289 195 VIPREE--L-QEESIKPLEKQRWAGAVDPVGG-KTLAYLLSTLQYG 236 (326)
T ss_pred EEcchh--H-HHHHHHhhccCCcCEEEECCcH-HHHHHHHHHhhcC
Confidence 887654 2 2344555544489999999998 5689999999988
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-29 Score=222.96 Aligned_cols=228 Identities=27% Similarity=0.405 Sum_probs=192.5
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||++++...+. .+++.+.+.|.+.++|++||++++++|+.|+..+.+..+....|.++|||++|+|+++|+ ..+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~ 78 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTP 78 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCC
Confidence 57888887664 367778888888999999999999999999999888765456688999999999999995 57999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..... .+. ...|+|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~-------------------~~~g~~~~~~~~~~~~~~~ip~~~ 115 (320)
T cd08243 79 GQRVATAMGG------------------------MGR-------------------TFDGSYAEYTLVPNEQVYAIDSDL 115 (320)
T ss_pred CCEEEEecCC------------------------CCC-------------------CCCcccceEEEcCHHHcEeCCCCC
Confidence 9999865320 000 012389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++++++.+++++.++|+++.....++++++|+|+|+ |.+|++++|+|+++|+ +|+++..++++.+.++++|++.++..
T Consensus 116 ~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 194 (320)
T cd08243 116 SWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA-TVTATTRSPERAALLKELGADEVVID 194 (320)
T ss_pred CHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCcEEEec
Confidence 999999999999999998877778999999999997 9999999999999999 79999899999999999999887653
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. .++.+.+.++ +.++|++||++|+ ..+..++++++++
T Consensus 195 -~--~~~~~~i~~~-~~~~d~vl~~~~~-~~~~~~~~~l~~~ 231 (320)
T cd08243 195 -D--GAIAEQLRAA-PGGFDKVLELVGT-ATLKDSLRHLRPG 231 (320)
T ss_pred -C--ccHHHHHHHh-CCCceEEEECCCh-HHHHHHHHHhccC
Confidence 2 3566667777 4589999999998 4689999999987
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.5e-29 Score=227.08 Aligned_cols=215 Identities=30% Similarity=0.448 Sum_probs=177.7
Q ss_pred eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC----CCCcccccceeEEEEEeCCCC----CCCCCCCEEee
Q 022865 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG----LFPCILGHEAAGIVESVGEGV----TEVQPGDHVIP 93 (291)
Q Consensus 22 ~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~Vv~~G~~~----~~~~~Gd~V~~ 93 (291)
...++.+.|.|.++|++|++.++++|+.|+.+..+.+.+. .+|.+++.++.|++...++.. ..+..|+.+..
T Consensus 20 ~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~ 99 (347)
T KOG1198|consen 20 LFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVA 99 (347)
T ss_pred EEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEee
Confidence 4457889999999999999999999999999999987554 377666666666644433322 22444444431
Q ss_pred cCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhh
Q 022865 94 CYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVC 173 (291)
Q Consensus 94 ~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa 173 (291)
+...|+|+||+.+|...++++|+++++.+++
T Consensus 100 -------------------------------------------------~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa 130 (347)
T KOG1198|consen 100 -------------------------------------------------FLSSGGLAEYVVVPEKLLVKIPESLSFEEAA 130 (347)
T ss_pred -------------------------------------------------ccCCCceeeEEEcchhhccCCCCccChhhhh
Confidence 2333599999999999999999999999999
Q ss_pred hhcccchhhhhhhhhhc------CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 174 LLGCGVPTGLGAVWNTA------KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 174 ~l~~~~~ta~~~~~~~~------~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++.++.|||.++.... ++++|++|||+|+ |++|++++|+|++.++ ..+++.++++++++++++|++++++|
T Consensus 131 ~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~-~~v~t~~s~e~~~l~k~lGAd~vvdy 209 (347)
T KOG1198|consen 131 ALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGA-IKVVTACSKEKLELVKKLGADEVVDY 209 (347)
T ss_pred cCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCC-cEEEEEcccchHHHHHHcCCcEeecC
Confidence 99999999999999999 8999999999976 9999999999999996 45555599999999999999999999
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++ +++.+.+.+.+.++||+||||+|++ ....++.++...|
T Consensus 210 ~~--~~~~e~~kk~~~~~~DvVlD~vg~~-~~~~~~~~l~~~g 249 (347)
T KOG1198|consen 210 KD--ENVVELIKKYTGKGVDVVLDCVGGS-TLTKSLSCLLKGG 249 (347)
T ss_pred CC--HHHHHHHHhhcCCCccEEEECCCCC-ccccchhhhccCC
Confidence 98 7888899988855999999999996 4677777776663
|
|
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.6e-29 Score=222.20 Aligned_cols=214 Identities=22% Similarity=0.343 Sum_probs=188.1
Q ss_pred eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCC
Q 022865 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100 (291)
Q Consensus 22 ~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~ 100 (291)
+++++.+.|.+.+++|+||++++++|+.|+..+.+.... ..+|.++|||++|+|+++|+.++++++||+|+..+.
T Consensus 14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~---- 89 (323)
T cd05282 14 LELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGG---- 89 (323)
T ss_pred EEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCC----
Confidence 667788888899999999999999999999988776532 346789999999999999999999999999985421
Q ss_pred CChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccch
Q 022865 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180 (291)
Q Consensus 101 ~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ 180 (291)
+ |+|++|+.++.+.++++|+++++.+++.+++.+.
T Consensus 90 ---------------------------~------------------g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ 124 (323)
T cd05282 90 ---------------------------E------------------GTWQEYVVAPADDLIPVPDSISDEQAAMLYINPL 124 (323)
T ss_pred ---------------------------C------------------CcceeEEecCHHHeEECCCCCCHHHHHHHhccHH
Confidence 1 3899999999999999999999999999999999
Q ss_pred hhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHh
Q 022865 181 TGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 181 ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~ 259 (291)
++|+++.....+.++++|+|+|+ |.+|++++++|+++|+ +++++.+++++++.++++|++++++++. .++.+.+.+
T Consensus 125 ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~ 201 (323)
T cd05282 125 TAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGF-KTINVVRRDEQVEELKALGADEVIDSSP--EDLAQRVKE 201 (323)
T ss_pred HHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCC-eEEEEecChHHHHHHHhcCCCEEecccc--hhHHHHHHH
Confidence 99998877778899999999987 9999999999999999 7888888899999999999998888765 457777888
Q ss_pred hcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 260 LTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++ ++|++|||+|+.. ...++++++++
T Consensus 202 ~~~~~~~d~vl~~~g~~~-~~~~~~~l~~~ 230 (323)
T cd05282 202 ATGGAGARLALDAVGGES-ATRLARSLRPG 230 (323)
T ss_pred HhcCCCceEEEECCCCHH-HHHHHHhhCCC
Confidence 8776 8999999999966 66889999887
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-28 Score=219.62 Aligned_cols=227 Identities=23% Similarity=0.248 Sum_probs=185.3
Q ss_pred eEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||+++...+. .++++++|.|.+.++||+||++++++|++|+..+.|..+. ...|.++|||++|+|++ +.+..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 5778877665 4789999999999999999999999999999988886532 24688999999999998 55678999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+..... .|.. . .|.|++|+.++.+.++++|+++
T Consensus 79 Gd~V~~~~~~------------------------~~~~-~------------------~g~~~~~~~~~~~~~~~iP~~~ 115 (323)
T TIGR02823 79 GDEVIVTGYG------------------------LGVS-H------------------DGGYSQYARVPADWLVPLPEGL 115 (323)
T ss_pred CCEEEEccCC------------------------CCCC-C------------------CccceEEEEEchhheEECCCCC
Confidence 9999855310 0100 1 2389999999999999999999
Q ss_pred Chhhhhhhcccchhhhhhhhhh--cCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNT--AKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~--~~~~~g~-~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
++++++.+++.+.+++.++... ..+.+++ +|+|+|+ |.+|.+++++|+++|+ +++++..+++++++++++|++.+
T Consensus 116 ~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~-~vi~~~~~~~~~~~~~~~g~~~~ 194 (323)
T TIGR02823 116 SLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGY-EVVASTGKAEEEDYLKELGASEV 194 (323)
T ss_pred CHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHhcCCcEE
Confidence 9999999998999998765332 3478898 9999998 9999999999999999 78887788888899999999888
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.++ ... .+..+.++++|+++||+|+. .+..++++++++
T Consensus 195 ~~~~~--~~~--~~~~~~~~~~d~vld~~g~~-~~~~~~~~l~~~ 234 (323)
T TIGR02823 195 IDRED--LSP--PGKPLEKERWAGAVDTVGGH-TLANVLAQLKYG 234 (323)
T ss_pred Ecccc--HHH--HHHHhcCCCceEEEECccHH-HHHHHHHHhCCC
Confidence 87643 222 44455555799999999986 588999999988
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-28 Score=219.29 Aligned_cols=213 Identities=27% Similarity=0.382 Sum_probs=181.0
Q ss_pred CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhh-cCCCCC--CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCC
Q 022865 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTW-SGKDPE--GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQA 97 (291)
Q Consensus 21 ~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~ 97 (291)
.+++++++.|.+.++||+||+.++++|++|+..+ .+.... ..+|.++|+|++|+|+++|+.++++++||+|+...
T Consensus 6 ~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~-- 83 (312)
T cd08269 6 RFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS-- 83 (312)
T ss_pred eeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec--
Confidence 3999999999999999999999999999999887 665321 22478999999999999999999999999998442
Q ss_pred CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcc
Q 022865 98 ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC 177 (291)
Q Consensus 98 ~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~ 177 (291)
.|+|++|+.++.+.++++|+++ ..++.+..
T Consensus 84 ------------------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~ 113 (312)
T cd08269 84 ------------------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGE 113 (312)
T ss_pred ------------------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhh
Confidence 1389999999999999999998 23332236
Q ss_pred cchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHH
Q 022865 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVL 257 (291)
Q Consensus 178 ~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v 257 (291)
++.++++++. ..+++++++++|+|+|.+|.+++++|+.+|+.+|+++.+.+++.++++++|++.+++... .++.+.+
T Consensus 114 ~~~~a~~~~~-~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~l 190 (312)
T cd08269 114 PLGCALNVFR-RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS--EAIVERV 190 (312)
T ss_pred hHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC--cCHHHHH
Confidence 7788888764 788899999999988999999999999999944999999999999999999988887654 5677778
Q ss_pred HhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 258 VDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 258 ~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+++++ ++|++|||+|....+..++++|+++
T Consensus 191 ~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~ 222 (312)
T cd08269 191 RELTGGAGADVVIEAVGHQWPLDLAGELVAER 222 (312)
T ss_pred HHHcCCCCCCEEEECCCCHHHHHHHHHHhccC
Confidence 887776 8999999999877899999999887
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-28 Score=219.95 Aligned_cols=233 Identities=23% Similarity=0.316 Sum_probs=186.6
Q ss_pred eEEEEecCCCCeEEEeeecCCC---CCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCCCC-CC
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPP---QAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT-EV 85 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~---~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~~~-~~ 85 (291)
|++++.+++.++++++++.|.| ++++|+||+.++++|++|+..+.+..... ..|.++|||++|+|+++|+.++ .|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~ 81 (352)
T cd08247 2 KALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEW 81 (352)
T ss_pred ceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCC
Confidence 6899999988888888877776 89999999999999999998875432221 2377899999999999999998 89
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc----ceE
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV----SVA 161 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~ 161 (291)
++||+|+......+ ...|+|++|+.++.. .++
T Consensus 82 ~~Gd~V~~~~~~~~--------------------------------------------~~~g~~~~~~~v~~~~~~~~~~ 117 (352)
T cd08247 82 KVGDEVCGIYPHPY--------------------------------------------GGQGTLSQYLLVDPKKDKKSIT 117 (352)
T ss_pred CCCCEEEEeecCCC--------------------------------------------CCCceeeEEEEEccccccceeE
Confidence 99999985532110 012489999999987 799
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhc-CCCCCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~-~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ 238 (291)
++|+++++.+++.+++.+.|+|+++.... .+++|++++|+|+ +.+|++++++|+++|. +.++.+. ++++.++++++
T Consensus 118 ~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 118 RKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred ECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 99999999999999999999999876666 7999999999988 8999999999999854 3677775 45556678899
Q ss_pred CCCEEeCCCCCCc--hHHHHHHhhc-CCCccEEEEcCCChHHHHHHHHHhh---cc
Q 022865 239 GVTEFVNPKDHDK--PIQQVLVDLT-DGGVDYSFECIGNVSVMRAALECCH---KV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~--~~~~~v~~~~-~gg~d~v~d~~g~~~~~~~~~~~l~---~~ 288 (291)
|++.+++.++... .+.+.++..+ ++++|++|||+|+...+..++++++ ++
T Consensus 197 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~ 252 (352)
T cd08247 197 GADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKN 252 (352)
T ss_pred CCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCC
Confidence 9998888655221 2333344444 3489999999999777889999998 77
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-28 Score=215.71 Aligned_cols=228 Identities=27% Similarity=0.390 Sum_probs=195.1
Q ss_pred eeEEEEecCC--CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPN--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~--~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
|||+++.+++ +.+++++++.|.+.+++++||+.++++|++|+....+.......|.++|||++|+|+.+|+.++.+++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~ 80 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKV 80 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCC
Confidence 7899999988 46999999999999999999999999999999888776543334778999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+...... . .++|++|+.++.+.++++|+++
T Consensus 81 Gd~V~~~~~~~----------------------------~------------------~~~~~s~~~~~~~~~~~ip~~~ 114 (325)
T cd08271 81 GDRVAYHASLA----------------------------R------------------GGSFAEYTVVDARAVLPLPDSL 114 (325)
T ss_pred CCEEEeccCCC----------------------------C------------------CccceeEEEeCHHHeEECCCCC
Confidence 99998553200 1 2389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++..++.+.+++.++|+++.....++++++++|+|+ +.+|++++++++..|+ +|+.+. ++++.++++++|++.+++.
T Consensus 115 ~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~-~v~~~~-~~~~~~~~~~~g~~~~~~~ 192 (325)
T cd08271 115 SFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL-RVITTC-SKRNFEYVKSLGADHVIDY 192 (325)
T ss_pred CHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEE-cHHHHHHHHHcCCcEEecC
Confidence 999999999999999998877788999999999998 8999999999999999 777775 6778888889999888776
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. ..+.+.+.+..++ ++|++++++++.. ...+++++++.
T Consensus 193 ~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~ 232 (325)
T cd08271 193 ND--EDVCERIKEITGGRGVDAVLDTVGGET-AAALAPTLAFN 232 (325)
T ss_pred CC--ccHHHHHHHHcCCCCCcEEEECCCcHh-HHHHHHhhccC
Confidence 54 4566677777766 8999999999865 56789999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.3e-28 Score=215.33 Aligned_cols=213 Identities=21% Similarity=0.223 Sum_probs=179.6
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||++++.+.+ ..+++++.+.|.+.++|++||+.++++|+.|+.+.... ..|.++|||++|+|+++|+.+..|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~----~~~~~~g~e~~G~v~~~G~~v~~~~~G 76 (305)
T cd08270 1 MRALVVDPDAPLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAER----PDGAVPGWDAAGVVERAAADGSGPAVG 76 (305)
T ss_pred CeEEEEccCCCceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccC----CCCCcccceeEEEEEEeCCCCCCCCCC
Confidence 5788887754 23777788999999999999999999999999876521 235789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+... . .|+|++|+.++.+.++++|++++
T Consensus 77 d~V~~~~-------------------------------~------------------~g~~~~~~~v~~~~~~~ip~~~~ 107 (305)
T cd08270 77 ARVVGLG-------------------------------A------------------MGAWAELVAVPTGWLAVLPDGVS 107 (305)
T ss_pred CEEEEec-------------------------------C------------------CcceeeEEEEchHHeEECCCCCC
Confidence 9997431 0 23899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.+++.+++.+.|+|+++...... ++++++|+|+ |.+|.+++++++.+|+ +|+.++++++++++++++|++..++..
T Consensus 108 ~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 185 (305)
T cd08270 108 FAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLAALAGA-HVVAVVGSPARAEGLRELGAAEVVVGG 185 (305)
T ss_pred HHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence 999999999999999987555544 5999999988 9999999999999999 899998999999999999987655432
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ++.++++|+++|++|+. .+..++++++.+
T Consensus 186 ~----------~~~~~~~d~vl~~~g~~-~~~~~~~~l~~~ 215 (305)
T cd08270 186 S----------ELSGAPVDLVVDSVGGP-QLARALELLAPG 215 (305)
T ss_pred c----------cccCCCceEEEECCCcH-HHHHHHHHhcCC
Confidence 1 12234799999999986 588999999988
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=214.40 Aligned_cols=231 Identities=28% Similarity=0.397 Sum_probs=196.0
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||++++..++.+ +.+.+++.|.+.+++|+|++.++++|++|+....+... ...+|.++|||++|+|+++|+++++|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 578888766543 88889999999999999999999999999998877553 235788999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... |.... .|.+++|+.++.+.++++|++
T Consensus 81 ~Gd~v~~~~~--------------------------~~~~~------------------~g~~~~~~~~~~~~~~~ip~~ 116 (325)
T cd08253 81 VGDRVWLTNL--------------------------GWGRR------------------QGTAAEYVVVPADQLVPLPDG 116 (325)
T ss_pred CCCEEEEecc--------------------------ccCCC------------------CcceeeEEEecHHHcEeCCCC
Confidence 9999986542 00001 238999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.+++++.++|+++.....+.++++++|+|+ +.+|++++++++.+|+ +|+++++++++.++++++|++.+++
T Consensus 117 ~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (325)
T cd08253 117 VSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGA-RVIATASSAEGAELVRQAGADAVFN 195 (325)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999987 9999999999999998 8999999999999999999988877
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+++.+ ++|+++|++|... ....+++++..
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~~~-~~~~~~~l~~~ 236 (325)
T cd08253 196 YRA--EDLADRILAATAGQGVDVIIEVLANVN-LAKDLDVLAPG 236 (325)
T ss_pred CCC--cCHHHHHHHHcCCCceEEEEECCchHH-HHHHHHhhCCC
Confidence 654 4566667776655 8999999999864 77888888877
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=213.48 Aligned_cols=226 Identities=27% Similarity=0.353 Sum_probs=193.8
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+.+ +++.+.+.|.+.++|++||+.++++|+.|+....+.++. ..+|.++|||++|+|+++|+.+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 689999876543 777788877889999999999999999999888775532 35678999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... + |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 81 VGDRVCALLA-------------------------------G------------------GGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred CCCEEEEecC-------------------------------C------------------CceeEEEEcCHHHhccCCCC
Confidence 9999974321 1 38999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++.+++.++.++.++|.++.+...+.++++++|+|+ |.+|++++++++.+|+ +|+.+++++++++.++++|++.+++
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGA-RVIATAGSEEKLEACRALGADVAIN 190 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788999999999997 9999999999999999 7999989999999999999887777
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+...+ ++|++||++|+.. +..++++++++
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~~~~~ 231 (323)
T cd05276 191 YRT--EDFAEEVKEATGGRGVDVILDMVGGDY-LARNLRALAPD 231 (323)
T ss_pred CCc--hhHHHHHHHHhCCCCeEEEEECCchHH-HHHHHHhhccC
Confidence 654 4566667776655 8999999999865 77888888877
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=213.71 Aligned_cols=229 Identities=27% Similarity=0.390 Sum_probs=194.8
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..++.+ +++++.+.|.+.+++|+|++.++++|++|+.+..+... ....|.++|||++|+|+++|+.+..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 689999987764 77888888888999999999999999999998877643 123578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... |.... .|.|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~--------------------------~~~~~------------------~g~~~~~~~v~~~~~~~~p~~ 116 (326)
T cd08272 81 VGDEVYGCAG--------------------------GLGGL------------------QGSLAEYAVVDARLLALKPAN 116 (326)
T ss_pred CCCEEEEccC--------------------------CcCCC------------------CCceeEEEEecHHHcccCCCC
Confidence 9999985431 00001 238999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++..++.+++.+.++|+++.+...++++++++|+|+ |.+|++++++++.+|+ +|+.+++. +++++++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~ 194 (326)
T cd08272 117 LSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGA-RVYATASS-EKAAFARSLGADPIIY 194 (326)
T ss_pred CCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCC-EEEEEech-HHHHHHHHcCCCEEEe
Confidence 9999999999899999998878889999999999986 9999999999999999 78888777 8889999999988777
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... . +.+.+.+++++ ++|+++|++|+. .+..+++++++.
T Consensus 195 ~~~--~-~~~~~~~~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~ 234 (326)
T cd08272 195 YRE--T-VVEYVAEHTGGRGFDVVFDTVGGE-TLDASFEAVALY 234 (326)
T ss_pred cch--h-HHHHHHHhcCCCCCcEEEECCChH-HHHHHHHHhccC
Confidence 654 4 66778887776 899999999985 488899999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=211.29 Aligned_cols=224 Identities=31% Similarity=0.419 Sum_probs=192.0
Q ss_pred eEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
||+.+..++.. +.+.+.+.+.+.++|++||+.++++|+.|+....+..+. .+|.++|||++|+|+.+|+.+++|++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~~G 79 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAGVVEAVGPGVTGFKVG 79 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeEEEEEECCCCCCCCCC
Confidence 46666655543 666677777789999999999999999999988776543 457789999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+... . .|+|++|+.++.+.++++|++++
T Consensus 80 ~~V~~~~-------------------------------~------------------~g~~~~~~~~~~~~~~~~p~~~~ 110 (320)
T cd05286 80 DRVAYAG-------------------------------P------------------PGAYAEYRVVPASRLVKLPDGIS 110 (320)
T ss_pred CEEEEec-------------------------------C------------------CCceeEEEEecHHHceeCCCCCC
Confidence 9997431 0 23899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.+++.+++...++|.++.....+.++++|+|+|+ |.+|++++++++.+|+ +|++++.++++.++++++|++.+++..
T Consensus 111 ~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 189 (320)
T cd05286 111 DETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGA-TVIGTVSSEEKAELARAAGADHVINYR 189 (320)
T ss_pred HHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHCCCCEEEeCC
Confidence 99999988899999998877788999999999996 9999999999999999 899999999999999999998888765
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
. ..+.+.+.+++.+ ++|++|||+++. .+..++++++++
T Consensus 190 ~--~~~~~~~~~~~~~~~~d~vl~~~~~~-~~~~~~~~l~~~ 228 (320)
T cd05286 190 D--EDFVERVREITGGRGVDVVYDGVGKD-TFEGSLDSLRPR 228 (320)
T ss_pred c--hhHHHHHHHHcCCCCeeEEEECCCcH-hHHHHHHhhccC
Confidence 4 5666777777766 899999999984 688999999887
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-27 Score=213.39 Aligned_cols=228 Identities=18% Similarity=0.216 Sum_probs=184.4
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..++. .++++++|.|.|+++||+||+.++++|++|+.++.+.... ..+|.++|||++|+|++ +.+++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 78999998774 4899999999999999999999999999999988776432 24578899999999999 6677899
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..... .+ ....|+|++|+.++.+.++++|++
T Consensus 79 ~Gd~V~~~~~~------------------------~~-------------------~~~~g~~~~~~~v~~~~~~~lp~~ 115 (324)
T cd08288 79 PGDRVVLTGWG------------------------VG-------------------ERHWGGYAQRARVKADWLVPLPEG 115 (324)
T ss_pred CCCEEEECCcc------------------------CC-------------------CCCCCcceeEEEEchHHeeeCCCC
Confidence 99999854210 00 001248999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhh--hhcCCC-CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVW--NTAKVE-PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~--~~~~~~-~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++++++.+++.+.+++.++. +..... ++++++|+|+ |.+|.+++|+|+.+|+ +|+++..++++.++++++|++.
T Consensus 116 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~-~vi~~~~~~~~~~~~~~~g~~~ 194 (324)
T cd08288 116 LSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGY-EVVASTGRPEEADYLRSLGASE 194 (324)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999988888886643 123444 5789999998 9999999999999999 7888889999999999999998
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++++ ....+..++.+++|.+||++++. .+..++..++.+
T Consensus 195 ~~~~~~----~~~~~~~~~~~~~~~~~d~~~~~-~~~~~~~~~~~~ 235 (324)
T cd08288 195 IIDRAE----LSEPGRPLQKERWAGAVDTVGGH-TLANVLAQTRYG 235 (324)
T ss_pred EEEcch----hhHhhhhhccCcccEEEECCcHH-HHHHHHHHhcCC
Confidence 888754 22245555555799999999974 466777777665
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-27 Score=204.38 Aligned_cols=211 Identities=25% Similarity=0.322 Sum_probs=177.9
Q ss_pred CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeC--CCCCCCCCCCEEeecCCCC
Q 022865 21 PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG--EGVTEVQPGDHVIPCYQAE 98 (291)
Q Consensus 21 ~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G--~~~~~~~~Gd~V~~~~~~~ 98 (291)
+|++++.++|.|+++|||||++|.++++.... +....+.--.|+-+|...+|.++... |..+.|++||.|....
T Consensus 26 ~F~lee~~vp~p~~GqvLl~~~ylS~DPymRg-rm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~--- 101 (340)
T COG2130 26 DFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRG-RMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVS--- 101 (340)
T ss_pred CceeEeccCCCCCcCceEEEEEEeccCHHHee-cccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecc---
Confidence 39999999999999999999999999995433 33333333456777776665554443 5678899999997331
Q ss_pred CCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh--hhhhc
Q 022865 99 CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK--VCLLG 176 (291)
Q Consensus 99 ~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~--aa~l~ 176 (291)
+|++|..++.+.+.+++++.-+.. ...+.
T Consensus 102 -------------------------------------------------GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLG 132 (340)
T COG2130 102 -------------------------------------------------GWQEYAISDGEGLRKLDPSPAPLSAYLGVLG 132 (340)
T ss_pred -------------------------------------------------cceEEEeechhhceecCCCCCCcchHHhhcC
Confidence 799999999999999986533222 33467
Q ss_pred ccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHH
Q 022865 177 CGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQ 254 (291)
Q Consensus 177 ~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~ 254 (291)
++..|||.++.+..+.++|++|+|.++ |++|..+.|+||..|+ +|+++..+++|.+++++ +|.|..|||+. +++.
T Consensus 133 mpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~-rVVGiaGg~eK~~~l~~~lGfD~~idyk~--~d~~ 209 (340)
T COG2130 133 MPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC-RVVGIAGGAEKCDFLTEELGFDAGIDYKA--EDFA 209 (340)
T ss_pred CchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC-eEEEecCCHHHHHHHHHhcCCceeeecCc--ccHH
Confidence 899999999999999999999999987 9999999999999999 99999999999999987 99999999998 6899
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.+..+.|+|+.||++|++. +...+..|+..
T Consensus 210 ~~L~~a~P~GIDvyfeNVGg~v-~DAv~~~ln~~ 242 (340)
T COG2130 210 QALKEACPKGIDVYFENVGGEV-LDAVLPLLNLF 242 (340)
T ss_pred HHHHHHCCCCeEEEEEcCCchH-HHHHHHhhccc
Confidence 9999999889999999999965 99999998877
|
|
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-27 Score=213.29 Aligned_cols=221 Identities=24% Similarity=0.322 Sum_probs=186.8
Q ss_pred eEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||+++...+. .+++++.+.|.|.++||+||+.++++|++|+.++.+..+. ..+|.++|||++|+|+++|+.++.|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~ 81 (331)
T cd08273 2 REVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEV 81 (331)
T ss_pred eeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCC
Confidence 6788887665 3888899999999999999999999999999988776543 256889999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+.... . |+|++|+.++.+.++++|+++
T Consensus 82 Gd~V~~~~~-------------------------------~------------------g~~~~~~~~~~~~~~~~p~~~ 112 (331)
T cd08273 82 GDRVAALTR-------------------------------V------------------GGNAEYINLDAKYLVPVPEGV 112 (331)
T ss_pred CCEEEEeCC-------------------------------C------------------cceeeEEEechHHeEECCCCC
Confidence 999974421 1 389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++.+++.+++++.++|+++.....+.++++++|+|+ |.+|++++++|+.+|+ +|+.+.. +++.++++++|+.. ++.
T Consensus 113 ~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~-~v~~~~~-~~~~~~~~~~g~~~-~~~ 189 (331)
T cd08273 113 DAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA-EVYGTAS-ERNHAALRELGATP-IDY 189 (331)
T ss_pred CHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEeC-HHHHHHHHHcCCeE-EcC
Confidence 999999999999999998877788999999999997 9999999999999999 7888877 88899999999754 343
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.. .++.+. +...+++|++||++|+.. +..++++++.+
T Consensus 190 ~~--~~~~~~--~~~~~~~d~vl~~~~~~~-~~~~~~~l~~~ 226 (331)
T cd08273 190 RT--KDWLPA--MLTPGGVDVVFDGVGGES-YEESYAALAPG 226 (331)
T ss_pred CC--cchhhh--hccCCCceEEEECCchHH-HHHHHHHhcCC
Confidence 32 233222 333358999999999876 88999999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=208.95 Aligned_cols=220 Identities=24% Similarity=0.276 Sum_probs=181.5
Q ss_pred eEEEEecCC------CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCC
Q 022865 11 KAAVAWEPN------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 11 ~a~~~~~~~------~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
||+++...+ +.+++++++.|.+.+++|+||+.++++|+.|...+.+... +...+.++|+|++|+|+++|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 455555433 2388999999999999999999999999988765554321 1123467899999999999964
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc-cce
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 160 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 160 (291)
+|++||+|+.. ++|++|+.++. +.+
T Consensus 83 --~~~~Gd~V~~~----------------------------------------------------~~~~~~~~v~~~~~~ 108 (329)
T cd05288 83 --DFKVGDLVSGF----------------------------------------------------LGWQEYAVVDGASGL 108 (329)
T ss_pred --CCCCCCEEecc----------------------------------------------------cceEEEEEecchhhc
Confidence 79999999722 17999999999 999
Q ss_pred EEcCCCCC--hhhhhh-hcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 161 AKIDPQAP--LDKVCL-LGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 161 ~~iP~~~~--~~~aa~-l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
+++|++++ +..++. +++++.|+|+++.....+.++++|||+|+ |.+|++++++|+.+|+ +|+++++++++.+.++
T Consensus 109 ~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~-~vi~~~~~~~~~~~~~ 187 (329)
T cd05288 109 RKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGA-RVVGIAGSDEKCRWLV 187 (329)
T ss_pred EECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 99999985 445555 88899999998877788899999999986 9999999999999999 8999989999999998
Q ss_pred h-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 237 N-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 237 ~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ +|++.++++++ .++.+.+.+.+++++|++|||+|+ ..+..++++++++
T Consensus 188 ~~~g~~~~~~~~~--~~~~~~v~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~ 237 (329)
T cd05288 188 EELGFDAAINYKT--PDLAEALKEAAPDGIDVYFDNVGG-EILDAALTLLNKG 237 (329)
T ss_pred hhcCCceEEecCC--hhHHHHHHHhccCCceEEEEcchH-HHHHHHHHhcCCC
Confidence 8 99988888765 456667777665689999999998 4689999999888
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-26 Score=205.53 Aligned_cols=231 Identities=29% Similarity=0.376 Sum_probs=194.3
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++...+. .+.+.+.+.|.+.+++++|++.++++|+.|+.+..+.... ..+|.++|||++|+|+.+|+.+..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 57888886554 3667788878889999999999999999999887765432 24578899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..+... ....|++++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~~~--------------------------------------------~~~~g~~~~~~~~~~~~~~~~p~~ 116 (328)
T cd08268 81 VGDRVSVIPAAD--------------------------------------------LGQYGTYAEYALVPAAAVVKLPDG 116 (328)
T ss_pred CCCEEEeccccc--------------------------------------------cCCCccceEEEEechHhcEeCCCC
Confidence 999998653210 001238999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++..++.+++++.++|.++.....+.++++++|+|+ |.+|++++++++..|+ +++.++.+++++++++++|++.+++
T Consensus 117 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 195 (328)
T cd08268 117 LSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIATTRTSEKRDALLALGAAHVIV 195 (328)
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEe
Confidence 9999999999999999998877788899999999987 9999999999999999 8888888999999999899888777
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+. .++.+.+.+.+.+ ++|++|+++|+ .....++++++.+
T Consensus 196 ~~~--~~~~~~~~~~~~~~~~d~vi~~~~~-~~~~~~~~~l~~~ 236 (328)
T cd08268 196 TDE--EDLVAEVLRITGGKGVDVVFDPVGG-PQFAKLADALAPG 236 (328)
T ss_pred cCC--ccHHHHHHHHhCCCCceEEEECCch-HhHHHHHHhhccC
Confidence 654 4566667777665 89999999998 4588889999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-26 Score=204.82 Aligned_cols=226 Identities=27% Similarity=0.345 Sum_probs=192.4
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+.+..++.+ +++++.+.+.+.+++++||+.++++|+.|+....+.+.. ..+|.++|||++|+|+.+|+.+.+++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 578888776554 667777777789999999999999999999888765432 24578999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+.... + |+|++|+.++.+.++++|++
T Consensus 81 ~Gd~V~~~~~-------------------------------~------------------~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 81 VGDRVCALVA-------------------------------G------------------GGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred CCCEEEEccC-------------------------------C------------------CcceeEEEecHHHcEeCCCC
Confidence 9999974311 1 28999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++..++.++++..++|.++.+...++++++++|+|+ |.+|.+++++++.+|+ +|+++.+++++.++++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA-RVFTTAGSDEKCAACEALGADIAIN 190 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCcEEEe
Confidence 9999999999999999998778889999999999987 9999999999999999 8889888999999999999877776
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .++.+.+.+..++ ++|++++++|.. .+..++++++++
T Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~l~~~ 231 (325)
T TIGR02824 191 YRE--EDFVEVVKAETGGKGVDVILDIVGGS-YLNRNIKALALD 231 (325)
T ss_pred cCc--hhHHHHHHHHcCCCCeEEEEECCchH-HHHHHHHhhccC
Confidence 654 4566677777765 899999999975 588899999877
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=204.31 Aligned_cols=208 Identities=26% Similarity=0.397 Sum_probs=181.0
Q ss_pred cCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhC
Q 022865 29 VAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKS 107 (291)
Q Consensus 29 ~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~ 107 (291)
.|.+.+++++||+.++++|+.|+..+.+.++. ..+|.++|+|++|+|+++|+.+++|++||+|+.....
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~---------- 71 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGE---------- 71 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCC----------
Confidence 46789999999999999999999988776542 2568899999999999999999999999999854320
Q ss_pred CCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhh
Q 022865 108 GKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187 (291)
Q Consensus 108 ~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~ 187 (291)
.+ |+|++|+.++.+.++++|+++++.+++.+++.+.++|.++
T Consensus 72 -------------------~~------------------g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l- 113 (303)
T cd08251 72 -------------------SM------------------GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAF- 113 (303)
T ss_pred -------------------CC------------------cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-
Confidence 11 3899999999999999999999999999999999999976
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-Cc
Q 022865 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GV 265 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~ 265 (291)
+..+++++++++|+++ +.+|++++|+++++|+ +|+++++.++++++++++|++.+++... .++...+.+++++ ++
T Consensus 114 ~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~~i~~~~~~~~~ 190 (303)
T cd08251 114 ARAGLAKGEHILIQTATGGTGLMAVQLARLKGA-EIYATASSDDKLEYLKQLGVPHVINYVE--EDFEEEIMRLTGGRGV 190 (303)
T ss_pred HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHcCCCEEEeCCC--ccHHHHHHHHcCCCCc
Confidence 5788999999999966 9999999999999999 8999989999999999999988887765 4566777777776 89
Q ss_pred cEEEEcCCChHHHHHHHHHhhcc
Q 022865 266 DYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 266 d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|+++|+++. ..+..+++++++.
T Consensus 191 d~v~~~~~~-~~~~~~~~~l~~~ 212 (303)
T cd08251 191 DVVINTLSG-EAIQKGLNCLAPG 212 (303)
T ss_pred eEEEECCcH-HHHHHHHHHhccC
Confidence 999999976 5688889999887
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-26 Score=202.72 Aligned_cols=224 Identities=26% Similarity=0.349 Sum_probs=186.0
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++..++.. +.+++.+.|.+.++||+||+.++++|+.|+..+.+... ...+|.++|||++|+|+++|+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 678888877653 55677777888999999999999999999998877542 2355889999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+...... . .|+|++|+.++.+.++++|
T Consensus 81 ~~~G~~V~~~~~~~----------------------------~------------------~g~~~~~~~~~~~~~~~~p 114 (309)
T cd05289 81 FKVGDEVFGMTPFT----------------------------R------------------GGAYAEYVVVPADELALKP 114 (309)
T ss_pred CCCCCEEEEccCCC----------------------------C------------------CCcceeEEEecHHHhccCC
Confidence 99999998553200 1 2389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
+++++..++.+++.+.++|.++.....+.++++++|+|+ |.+|++++++++.+|+ +|+.+..++ +.++++++|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~-~~~~~~~~g~~~~ 192 (309)
T cd05289 115 ANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA-RVIATASAA-NADFLRSLGADEV 192 (309)
T ss_pred CCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCC-EEEEEecch-hHHHHHHcCCCEE
Confidence 999999999888899999998777677899999999997 9999999999999999 788877766 8888889998777
Q ss_pred eCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++... .++.+ ...+ ++|++||++|+. ....++++++++
T Consensus 193 ~~~~~--~~~~~----~~~~~~~d~v~~~~~~~-~~~~~~~~l~~~ 231 (309)
T cd05289 193 IDYTK--GDFER----AAAPGGVDAVLDTVGGE-TLARSLALVKPG 231 (309)
T ss_pred EeCCC--Cchhh----ccCCCCceEEEECCchH-HHHHHHHHHhcC
Confidence 77654 22322 2333 899999999987 588999999987
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-25 Score=199.94 Aligned_cols=225 Identities=32% Similarity=0.465 Sum_probs=190.2
Q ss_pred eeEEEEecCCC--CeEEEeeecCCCC-CCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCC
Q 022865 10 CKAAVAWEPNK--PLVIEDVQVAPPQ-AGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 10 ~~a~~~~~~~~--~~~~~~~~~~~~~-~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
|+|+++...+. .+++.+.+ |.+. +++++||+.++++|++|+..+.+.... ...|.++|||++|+|+.+|+.+..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 57888875443 37777777 6666 499999999999999999988776532 2346789999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|+.... .|.+++|+.++.+.++++|+
T Consensus 80 ~~G~~V~~~~~-------------------------------------------------~~~~~~~~~~~~~~~~~ip~ 110 (323)
T cd08241 80 KVGDRVVALTG-------------------------------------------------QGGFAEEVVVPAAAVFPLPD 110 (323)
T ss_pred CCCCEEEEecC-------------------------------------------------CceeEEEEEcCHHHceeCCC
Confidence 99999985420 13899999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
++++.+++.+.++..++|.++.....+.++++++|+|+ |.+|++++++++.+|+ .|+.++.++++.++++++|++.++
T Consensus 111 ~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (323)
T cd08241 111 GLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGA-RVIAAASSEEKLALARALGADHVI 189 (323)
T ss_pred CCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCC-EEEEEeCCHHHHHHHHHcCCceee
Confidence 99998888888899999998776788999999999998 9999999999999999 799998999999999999987777
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+... .++.+.+.+.+++ ++|+++|++|. ..+..++++++++
T Consensus 190 ~~~~--~~~~~~i~~~~~~~~~d~v~~~~g~-~~~~~~~~~~~~~ 231 (323)
T cd08241 190 DYRD--PDLRERVKALTGGRGVDVVYDPVGG-DVFEASLRSLAWG 231 (323)
T ss_pred ecCC--ccHHHHHHHHcCCCCcEEEEECccH-HHHHHHHHhhccC
Confidence 6654 4567778887766 89999999998 5588899999887
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.4e-26 Score=198.63 Aligned_cols=198 Identities=25% Similarity=0.327 Sum_probs=174.0
Q ss_pred CeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCC
Q 022865 35 GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCG 114 (291)
Q Consensus 35 ~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~ 114 (291)
+|++||+.++++|++|+....+.. ..+|.++|||++|+|+++|+.++.|++||+|+...
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~------------------- 59 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA------------------- 59 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence 589999999999999999887764 24578999999999999999999999999997432
Q ss_pred CccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCC
Q 022865 115 KVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEP 194 (291)
Q Consensus 115 ~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~ 194 (291)
.|+|++|+.++.+.++++|+++++.+++.++++..++|.++.+...+++
T Consensus 60 -------------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ 108 (293)
T cd05195 60 -------------------------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQK 108 (293)
T ss_pred -------------------------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCC
Confidence 1389999999999999999999999999998899999998877788999
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC--CCEEeCCCCCCchHHHHHHhhcCC-CccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g--a~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d 270 (291)
+++++|+|+ |.+|++++++++.+|+ +++++..++++.+++++++ ++.+++... .++.+.+.+++.+ ++|+++|
T Consensus 109 g~~vlv~g~~g~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~ 185 (293)
T cd05195 109 GESVLIHAAAGGVGQAAIQLAQHLGA-EVFATVGSEEKREFLRELGGPVDHIFSSRD--LSFADGILRATGGRGVDVVLN 185 (293)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHhCCCcceEeecCc--hhHHHHHHHHhCCCCceEEEe
Confidence 999999975 9999999999999999 8999988889999998888 677776654 4677778887766 8999999
Q ss_pred cCCChHHHHHHHHHhhcc
Q 022865 271 CIGNVSVMRAALECCHKV 288 (291)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~ 288 (291)
++|+. .+..++++++++
T Consensus 186 ~~~~~-~~~~~~~~l~~~ 202 (293)
T cd05195 186 SLSGE-LLRASWRCLAPF 202 (293)
T ss_pred CCCch-HHHHHHHhcccC
Confidence 99987 699999999987
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.8e-25 Score=198.31 Aligned_cols=224 Identities=24% Similarity=0.347 Sum_probs=184.9
Q ss_pred eEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
||+++...+. .+.+.+.+.|.|.+++|+||+.++++|+.|+..+.+.... ...|.++|||++|+|+.+|+.+++|++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 4666665553 3777788878889999999999999999999988776532 245778999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+.... + |+|++|+.++.+.++++|+++
T Consensus 81 G~~V~~~~~-------------------------------~------------------~~~~~~~~~~~~~~~~ip~~~ 111 (337)
T cd08275 81 GDRVMGLTR-------------------------------F------------------GGYAEVVNVPADQVFPLPDGM 111 (337)
T ss_pred CCEEEEecC-------------------------------C------------------CeeeeEEEecHHHeEECCCCC
Confidence 999985421 1 389999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
++.+++.++++..++|+++....+++++++|+|+|+ |.+|++++++|+.+ +. .++.. ..+++.++++++|++.+++
T Consensus 112 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~~~ 189 (337)
T cd08275 112 SFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNV-TVVGT-ASASKHEALKENGVTHVID 189 (337)
T ss_pred CHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCc-EEEEe-CCHHHHHHHHHcCCcEEee
Confidence 999999999999999998877888999999999998 99999999999999 33 33222 3456788888899988877
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+. ..+.+.+.+.+.+++|+++|++|+. .+..++++++++
T Consensus 190 ~~~--~~~~~~~~~~~~~~~d~v~~~~g~~-~~~~~~~~l~~~ 229 (337)
T cd08275 190 YRT--QDYVEEVKKISPEGVDIVLDALGGE-DTRKSYDLLKPM 229 (337)
T ss_pred CCC--CcHHHHHHHHhCCCceEEEECCcHH-HHHHHHHhhccC
Confidence 664 4566677776655899999999985 478899999887
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.6e-25 Score=199.06 Aligned_cols=213 Identities=26% Similarity=0.354 Sum_probs=173.9
Q ss_pred EEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCC
Q 022865 23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99 (291)
Q Consensus 23 ~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~ 99 (291)
++++.+.|.|.++||+|+++++++|++|+..+.+..+ ....|..+|||++|+|+++|+.+.++.+||+|+......
T Consensus 15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~- 93 (319)
T cd08267 15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPK- 93 (319)
T ss_pred ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCC-
Confidence 7788899999999999999999999999998877652 123567899999999999999999999999998553210
Q ss_pred CCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccc
Q 022865 100 RECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179 (291)
Q Consensus 100 ~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~ 179 (291)
.. |.|++|+.++.+.++++|+++++..++.+++++
T Consensus 94 ---------------------------~~------------------g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~ 128 (319)
T cd08267 94 ---------------------------GG------------------GALAEYVVAPESGLAKKPEGVSFEEAAALPVAG 128 (319)
T ss_pred ---------------------------CC------------------ceeeEEEEechhheEECCCCCCHHHHHhhhhHH
Confidence 11 389999999999999999999999999999999
Q ss_pred hhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHH
Q 022865 180 PTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 180 ~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~ 258 (291)
.++|+++.....++++++++|+|+ |.+|++++++|+.+|+ +|+++..+ ++.++++++|++.+++... .++. .
T Consensus 129 ~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~-~v~~~~~~-~~~~~~~~~g~~~~~~~~~--~~~~---~ 201 (319)
T cd08267 129 LTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA-HVTGVCST-RNAELVRSLGADEVIDYTT--EDFV---A 201 (319)
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCH-HHHHHHHHcCCCEeecCCC--CCcc---h
Confidence 999998877777999999999997 9999999999999999 78887765 8888889999988877654 2222 3
Q ss_pred hhcCC-CccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 259 DLTDG-GVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~g-g~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
..+.+ ++|+++||+|+. ......+..++++
T Consensus 202 ~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~ 233 (319)
T cd08267 202 LTAGGEKYDVIFDAVGNSPFSLYRASLALKPG 233 (319)
T ss_pred hccCCCCCcEEEECCCchHHHHHHhhhccCCC
Confidence 34444 899999999952 2333444346666
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.1e-24 Score=189.58 Aligned_cols=193 Identities=25% Similarity=0.378 Sum_probs=168.7
Q ss_pred EEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccC
Q 022865 39 IKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118 (291)
Q Consensus 39 Vkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~ 118 (291)
||+.++++|++|+..+.+.++ .|.++|||++|+|+++|+.++.|++||+|+...
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~----------------------- 55 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA----------------------- 55 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence 899999999999998877543 357899999999999999999999999997431
Q ss_pred CCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEE
Q 022865 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIV 198 (291)
Q Consensus 119 ~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~v 198 (291)
.|+|++|+.++.+.++++|+++++.+++.+.++..++|.++.+...+.++++|
T Consensus 56 ---------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~v 108 (288)
T smart00829 56 ---------------------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESV 108 (288)
T ss_pred ---------------------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEE
Confidence 13899999999999999999999999999999999999987777889999999
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--CEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCC
Q 022865 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGN 274 (291)
Q Consensus 199 lI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga--~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~ 274 (291)
+|+|+ |.+|++++++++++|+ +|++++++++++++++++|+ +.+++++. .++.+.+.+..++ ++|+++|++|.
T Consensus 109 lv~g~~~~~g~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~~~ 185 (288)
T smart00829 109 LIHAAAGGVGQAAIQLAQHLGA-EVFATAGSPEKRDFLRELGIPDDHIFSSRD--LSFADEILRATGGRGVDVVLNSLAG 185 (288)
T ss_pred EEecCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCChhheeeCCC--ccHHHHHHHHhCCCCcEEEEeCCCH
Confidence 99986 9999999999999999 89999899999999999998 66776654 4566677777665 89999999996
Q ss_pred hHHHHHHHHHhhcc
Q 022865 275 VSVMRAALECCHKV 288 (291)
Q Consensus 275 ~~~~~~~~~~l~~~ 288 (291)
..+..++++++++
T Consensus 186 -~~~~~~~~~l~~~ 198 (288)
T smart00829 186 -EFLDASLRCLAPG 198 (288)
T ss_pred -HHHHHHHHhccCC
Confidence 5688899999887
|
Enoylreductase in Polyketide synthases. |
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-22 Score=154.37 Aligned_cols=108 Identities=37% Similarity=0.691 Sum_probs=93.3
Q ss_pred CCeEEEEEeeeecchhhhhhhcC-CCCCCCCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCC
Q 022865 34 AGEVRIKILFTALCHTDAYTWSG-KDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112 (291)
Q Consensus 34 ~~evlVkv~~~~i~~~D~~~~~g-~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 112 (291)
|+|||||+++++||++|++++.+ ......+|.++|||++|+|+++|+++++|++||+|++.+...|+.|.+|..+..++
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 68999999999999999999998 45556899999999999999999999999999999999988899999999999999
Q ss_pred CCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 113 ~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
|++... +|+. .+| +|+||+.++.++++++
T Consensus 81 c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEV---LGLG-LDG------------------GFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEE---TTTS-STC------------------SSBSEEEEEGGGEEEE
T ss_pred CCCCCE---eEcC-CCC------------------cccCeEEEehHHEEEC
Confidence 987654 2322 334 9999999999999975
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.1e-21 Score=169.29 Aligned_cols=163 Identities=33% Similarity=0.425 Sum_probs=140.6
Q ss_pred CCCcccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCcee
Q 022865 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141 (291)
Q Consensus 62 ~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~ 141 (291)
++|.++|||++|+|+++|+++++|++||+|+...
T Consensus 19 ~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~---------------------------------------------- 52 (277)
T cd08255 19 PLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFG---------------------------------------------- 52 (277)
T ss_pred cCCcccCcceeEEEEEeCCCCCCCCCCCEEEecC----------------------------------------------
Confidence 4889999999999999999999999999997331
Q ss_pred cccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 022865 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASR 221 (291)
Q Consensus 142 ~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~ 221 (291)
.|++|+.++.+.++++|+++++.+++.+ +++.++|+++ ...+++++++++|+|+|.+|++++++|+++|+.+
T Consensus 53 ------~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~ 124 (277)
T cd08255 53 ------PHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAEPRLGERVAVVGLGLVGLLAAQLAKAAGARE 124 (277)
T ss_pred ------CcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCc
Confidence 5899999999999999999999998888 7899999976 4688999999999988999999999999999944
Q ss_pred EEEEcCChhhHHHHHhcC-CCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 222 VIGIDIDPKKFDRAKNFG-VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 222 v~~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|++++++++++++++++| ++.++.... ..+.+ ++|++||+++....+..++++++++
T Consensus 125 vi~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~ 183 (277)
T cd08255 125 VVGVDPDAARRELAEALGPADPVAADTA----------DEIGGRGADVVIEASGSPSALETALRLLRDR 183 (277)
T ss_pred EEEECCCHHHHHHHHHcCCCccccccch----------hhhcCCCCCEEEEccCChHHHHHHHHHhcCC
Confidence 999999999999999999 444443321 11233 8999999999877899999999988
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.2e-20 Score=159.11 Aligned_cols=207 Identities=26% Similarity=0.300 Sum_probs=162.7
Q ss_pred EeeecC-CCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCccccc----ceeEEEEEeCCCCCCCCCCCEEeecCCCC
Q 022865 25 EDVQVA-PPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH----EAAGIVESVGEGVTEVQPGDHVIPCYQAE 98 (291)
Q Consensus 25 ~~~~~~-~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~----e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~ 98 (291)
.+++++ +++++++|||.+|.+..|.....+....+.. -.|+.+|- .++|+|++ |..+++++||.|....
T Consensus 27 ~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v~g~~--- 101 (343)
T KOG1196|consen 27 TTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLVWGIV--- 101 (343)
T ss_pred eeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceEEEec---
Confidence 345544 4689999999999999988654433222221 22344433 67999999 5678899999996332
Q ss_pred CCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCC--CCChhhhh-
Q 022865 99 CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDP--QAPLDKVC- 173 (291)
Q Consensus 99 ~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~--~~~~~~aa- 173 (291)
+|.+|.++++. ..++|+. +.++....
T Consensus 102 -------------------------------------------------gWeeysii~~~~~~~~ki~~~~~~pLs~ylg 132 (343)
T KOG1196|consen 102 -------------------------------------------------GWEEYSVITPNDLEHFKIQHPTDVPLSYYLG 132 (343)
T ss_pred -------------------------------------------------cceEEEEecCcchhcccCCCCCccCHhhhhh
Confidence 68999888654 3444433 44444433
Q ss_pred hhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCc
Q 022865 174 LLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDK 251 (291)
Q Consensus 174 ~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~ 251 (291)
++.++.+|||..+.+....++|++|+|-|| |++|.++.|+|+.+|+ +|++...++||.++++ +||.+..+||+++ .
T Consensus 133 ~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~Ak~~Gc-~VVGsaGS~EKv~ll~~~~G~d~afNYK~e-~ 210 (343)
T KOG1196|consen 133 LLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKLMGC-YVVGSAGSKEKVDLLKTKFGFDDAFNYKEE-S 210 (343)
T ss_pred ccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHHHhcCC-EEEEecCChhhhhhhHhccCCccceeccCc-c
Confidence 467899999999999999999999999987 9999999999999999 9999999999999997 6799999999983 4
Q ss_pred hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 252 PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 252 ~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+..+++.+..+.|+|+.||.+|+.. +...+..|+..
T Consensus 211 ~~~~aL~r~~P~GIDiYfeNVGG~~-lDavl~nM~~~ 246 (343)
T KOG1196|consen 211 DLSAALKRCFPEGIDIYFENVGGKM-LDAVLLNMNLH 246 (343)
T ss_pred CHHHHHHHhCCCcceEEEeccCcHH-HHHHHHhhhhc
Confidence 7788888888889999999999965 88888888877
|
|
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-19 Score=177.26 Aligned_cols=206 Identities=20% Similarity=0.257 Sum_probs=172.4
Q ss_pred eEEEeeecC---CCCCCeEEEEEeeeecchhhhhhhcCCCCCCCC-------CcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 22 LVIEDVQVA---PPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF-------PCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 22 ~~~~~~~~~---~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~-------p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
++..+-+.. +..++.=+.-|.|+.||..|+++.+|+.++... .+++|-|++|+ ..-|.||
T Consensus 1429 lrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~GrRv 1498 (2376)
T KOG1202|consen 1429 LRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGRRV 1498 (2376)
T ss_pred eeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCcEE
Confidence 555555544 236777899999999999999999999876533 36889999888 4559999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~ 171 (291)
..... . -.+++.+.++.+++|.+|.+..+++
T Consensus 1499 M~mvp-------------------------------A------------------ksLATt~l~~rd~lWevP~~WTlee 1529 (2376)
T KOG1202|consen 1499 MGMVP-------------------------------A------------------KSLATTVLASRDFLWEVPSKWTLEE 1529 (2376)
T ss_pred EEeee-------------------------------h------------------hhhhhhhhcchhhhhhCCcccchhh
Confidence 64432 1 1688888899999999999999999
Q ss_pred hhhhcccchhhhhhhhhhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCC
Q 022865 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNP 246 (291)
Q Consensus 172 aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~ 246 (291)
|+..++.++|+|+|+..+.+.++|++|||+ |+|++|++||.+|.++|+ +|+.+..+.||++++.+. ....+-|.
T Consensus 1530 AstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~-~VFTTVGSaEKRefL~~rFPqLqe~~~~NS 1608 (2376)
T KOG1202|consen 1530 ASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGC-TVFTTVGSAEKREFLLKRFPQLQETNFANS 1608 (2376)
T ss_pred cccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCC-EEEEecCcHHHHHHHHHhchhhhhhccccc
Confidence 999999999999999999999999999999 559999999999999999 999999999999998652 22333343
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+ +.+|-+-+.+.|.| |+|+|+|+...+. ++.+++||+.. ||
T Consensus 1609 R--dtsFEq~vl~~T~GrGVdlVLNSLaeEk-LQASiRCLa~~-GR 1650 (2376)
T KOG1202|consen 1609 R--DTSFEQHVLWHTKGRGVDLVLNSLAEEK-LQASIRCLALH-GR 1650 (2376)
T ss_pred c--cccHHHHHHHHhcCCCeeeehhhhhHHH-HHHHHHHHHhc-Ce
Confidence 3 47899999999998 9999999999876 99999999999 54
|
|
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-13 Score=105.91 Aligned_cols=82 Identities=30% Similarity=0.503 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHH
Q 022865 205 TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALE 283 (291)
Q Consensus 205 ~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~ 283 (291)
++|++++|+|+++|+ +|++++++++|+++++++|++.++++++ .++.+.+++++++ ++|+||||+|+...++.+++
T Consensus 1 ~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~~~~~Ga~~~~~~~~--~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 77 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGA-KVIATDRSEEKLELAKELGADHVIDYSD--DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIK 77 (130)
T ss_dssp HHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTESEEEETTT--SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCC-EEEEEECCHHHHHHHHhhcccccccccc--cccccccccccccccceEEEEecCcHHHHHHHHH
Confidence 589999999999996 9999999999999999999999999887 5689999999988 99999999999899999999
Q ss_pred HhhccC
Q 022865 284 CCHKVS 289 (291)
Q Consensus 284 ~l~~~g 289 (291)
+++++|
T Consensus 78 ~l~~~G 83 (130)
T PF00107_consen 78 LLRPGG 83 (130)
T ss_dssp HEEEEE
T ss_pred HhccCC
Confidence 999983
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.00 E-value=2.6e-09 Score=101.08 Aligned_cols=97 Identities=20% Similarity=0.252 Sum_probs=76.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCC-----------chHHHHHHh
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHD-----------KPIQQVLVD 259 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~-----------~~~~~~v~~ 259 (291)
..++++|+|+|+|.+|+++++.|+.+|+ +|+++|.++++++.++++|++.+ ++..+.+ .++.+...+
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA-~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGA-IVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 4679999999999999999999999999 89999999999999999999854 5543211 123233333
Q ss_pred h-cC--CCccEEEEcCCC-----hHHH-HHHHHHhhccC
Q 022865 260 L-TD--GGVDYSFECIGN-----VSVM-RAALECCHKVS 289 (291)
Q Consensus 260 ~-~~--gg~d~v~d~~g~-----~~~~-~~~~~~l~~~g 289 (291)
. .. +++|+||+|+|. +.++ +++++.++++|
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGg 279 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGS 279 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCC
Confidence 2 22 379999999996 3364 99999999983
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.8e-07 Score=85.38 Aligned_cols=92 Identities=22% Similarity=0.321 Sum_probs=74.1
Q ss_pred hhhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 183 LGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 183 ~~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.++.+..+ .-+|++|+|+|.|++|+.+++.++.+|+ +|++++.++.|++.++++|++.+ + ..+.+
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga-~ViV~d~d~~R~~~A~~~G~~~~-~-------~~e~v---- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGA-RVIVTEVDPICALQAAMEGYEVM-T-------MEEAV---- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEECChhhHHHHHhcCCEEc-c-------HHHHH----
Confidence 344444444 4689999999999999999999999999 89999999999999999998432 1 11122
Q ss_pred CCCccEEEEcCCChHHHHHH-HHHhhcc
Q 022865 262 DGGVDYSFECIGNVSVMRAA-LECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~-~~~l~~~ 288 (291)
.++|+||+|+|++..+... +++++++
T Consensus 256 -~~aDVVI~atG~~~~i~~~~l~~mk~G 282 (413)
T cd00401 256 -KEGDIFVTTTGNKDIITGEHFEQMKDG 282 (413)
T ss_pred -cCCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 2589999999999988887 8888887
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.36 E-value=2.5e-06 Score=80.89 Aligned_cols=95 Identities=21% Similarity=0.301 Sum_probs=71.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCC-----------CchHHHHHHhh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDH-----------DKPIQQVLVDL 260 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~-----------~~~~~~~v~~~ 260 (291)
.++.+++|+|+|.+|++++++++.+|+ .|++++.++++++.++++|++.+. +..++ ..++.+...++
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA-~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 457899999999999999999999999 799999999999999999987632 22110 12333333333
Q ss_pred cC---CCccEEEEcC---CChH---HHHHHHHHhhcc
Q 022865 261 TD---GGVDYSFECI---GNVS---VMRAALECCHKV 288 (291)
Q Consensus 261 ~~---gg~d~v~d~~---g~~~---~~~~~~~~l~~~ 288 (291)
.. .++|+||+|+ |.+. ..+..++.++++
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpG 277 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAG 277 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCC
Confidence 32 3799999999 6433 577788888887
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.6e-05 Score=72.64 Aligned_cols=93 Identities=26% Similarity=0.316 Sum_probs=69.9
Q ss_pred hhhhhhhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhh
Q 022865 182 GLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 182 a~~~~~~~~~~~-~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
.|.++.+...+. .|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|++ +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga-~ViV~d~dp~ra~~A~~~G~~-v~~-------l~eal--- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGA-RVIVTEVDPICALQAAMDGFR-VMT-------MEEAA--- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCchhhHHHHhcCCE-ecC-------HHHHH---
Confidence 345444443444 89999999999999999999999999 899999998887766666653 221 11222
Q ss_pred cCCCccEEEEcCCChHHHH-HHHHHhhcc
Q 022865 261 TDGGVDYSFECIGNVSVMR-AALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~-~~~~~l~~~ 288 (291)
.++|+||+++|+...+. ..++.++++
T Consensus 266 --~~aDVVI~aTG~~~vI~~~~~~~mK~G 292 (425)
T PRK05476 266 --ELGDIFVTATGNKDVITAEHMEAMKDG 292 (425)
T ss_pred --hCCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 26999999999988776 577777776
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=98.00 E-value=1.7e-05 Score=71.36 Aligned_cols=109 Identities=20% Similarity=0.202 Sum_probs=78.1
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCC---CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-H
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKV---EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-D 233 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~---~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~ 233 (291)
+.++++|+.+..+.+.... +.+.++.++...... .++.+|+|+|+|.+|..+++.++..|..+|++++++.++. +
T Consensus 139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 5677778888877776654 566666654322221 3689999999999999999999988877899999998864 7
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
+++++|+. ++.. .+..+.+. .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~----~~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL----DELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH----HHHHHHHh-----cCCEEEECCCCCch
Confidence 77888873 3322 12222221 48999999998765
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.98 E-value=5.8e-07 Score=84.05 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=100.3
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceeccc
Q 022865 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 144 (291)
Q Consensus 65 ~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~ 144 (291)
..-|.|.++.+.+|++.++. .|++.+.. |+-|+.| .+.|..... .|.. .++
T Consensus 88 ~~~~~~a~~hl~~Va~GldS-----~V~GE~qI-~gQvk~a----~~~a~~~~~---~g~~-l~~--------------- 138 (417)
T TIGR01035 88 ILTGESAVEHLFRVASGLDS-----MVVGETQI-LGQVKNA----YKVAQEEKT---VGKV-LER--------------- 138 (417)
T ss_pred hcCchHHHHHHHHHHhhhhh-----hhcCChHH-HHHHHHH----HHHHHHcCC---chHH-HHH---------------
Confidence 35688999999999988765 55555555 7777887 233332221 1110 222
Q ss_pred CCcceeeeEEecccceEE---c-CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC
Q 022865 145 GTSTFSQYTVVHDVSVAK---I-DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS 220 (291)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~---i-P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~ 220 (291)
.|++++.++. .+.. | +..++...++.- .........++++|+|+|+|.+|..+++.++..|+.
T Consensus 139 ---lf~~a~~~~k-~vr~~t~i~~~~vSv~~~Av~---------la~~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~ 205 (417)
T TIGR01035 139 ---LFQKAFSVGK-RVRTETDISAGAVSISSAAVE---------LAERIFGSLKGKKALLIGAGEMGELVAKHLLRKGVG 205 (417)
T ss_pred ---HHHHHHHHhh-hhhhhcCCCCCCcCHHHHHHH---------HHHHHhCCccCCEEEEECChHHHHHHHHHHHHCCCC
Confidence 7888888765 3332 3 223333333211 011223335678999999999999999999999976
Q ss_pred eEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 221 RVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 221 ~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
+|++++++.++.+ ++++++.. .+.. .+..+.+ .++|+||+|++.+..
T Consensus 206 ~V~v~~rs~~ra~~la~~~g~~-~i~~----~~l~~~l-----~~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 206 KILIANRTYERAEDLAKELGGE-AVKF----EDLEEYL-----AEADIVISSTGAPHP 253 (417)
T ss_pred EEEEEeCCHHHHHHHHHHcCCe-EeeH----HHHHHHH-----hhCCEEEECCCCCCc
Confidence 9999999988754 66777753 2221 1222222 159999999987543
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=97.98 E-value=6.8e-05 Score=69.43 Aligned_cols=91 Identities=25% Similarity=0.330 Sum_probs=68.8
Q ss_pred hhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC
Q 022865 184 GAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 184 ~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.++.+..+ ...|++|+|+|.|.+|+.+++.++.+|+ +|++++.++.+...+...|+. +.. ..+.+
T Consensus 183 ~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga-~ViV~d~dp~r~~~A~~~G~~-v~~-------leeal----- 248 (406)
T TIGR00936 183 DGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGA-RVIVTEVDPIRALEAAMDGFR-VMT-------MEEAA----- 248 (406)
T ss_pred HHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcC-EEEEEeCChhhHHHHHhcCCE-eCC-------HHHHH-----
Confidence 33434433 3689999999999999999999999999 899999888887777777762 221 11222
Q ss_pred CCccEEEEcCCChHHHHH-HHHHhhcc
Q 022865 263 GGVDYSFECIGNVSVMRA-ALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~g~~~~~~~-~~~~l~~~ 288 (291)
.++|+||+++|++..+.. .+..++++
T Consensus 249 ~~aDVVItaTG~~~vI~~~~~~~mK~G 275 (406)
T TIGR00936 249 KIGDIFITATGNKDVIRGEHFENMKDG 275 (406)
T ss_pred hcCCEEEECCCCHHHHHHHHHhcCCCC
Confidence 258999999999888875 77777776
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.91 E-value=0.00012 Score=65.40 Aligned_cols=84 Identities=24% Similarity=0.324 Sum_probs=64.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+++++|+|.|.+|+.+++.++.+|+ +|++++++.++++.++++|+.. +.. . .+.+... .+|+||++++
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga-~V~v~~r~~~~~~~~~~~G~~~-~~~----~----~l~~~l~-~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGA-NVTVGARKSAHLARITEMGLSP-FHL----S----ELAEEVG-KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCee-ecH----H----HHHHHhC-CCCEEEECCC
Confidence 57899999999999999999999999 9999999998888888888642 211 1 1222222 5999999998
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
.....+..++.++++
T Consensus 220 ~~~i~~~~l~~~~~g 234 (296)
T PRK08306 220 ALVLTKEVLSKMPPE 234 (296)
T ss_pred hhhhhHHHHHcCCCC
Confidence 765556666667664
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=68.94 Aligned_cols=93 Identities=26% Similarity=0.334 Sum_probs=70.7
Q ss_pred hhhhhhhcCC-CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 183 LGAVWNTAKV-EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 183 ~~~~~~~~~~-~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.++.+..++ -.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|... + +..+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga-~VIV~e~dp~r~~eA~~~G~~v-v-------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGA-RVIVTEIDPICALQALMEGYQV-L-------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhHHHHhcCCee-c-------cHHHHHh---
Confidence 4444454443 579999999999999999999999999 8999999888776777777642 1 1222222
Q ss_pred CCCccEEEEcCCChHHH-HHHHHHhhccC
Q 022865 262 DGGVDYSFECIGNVSVM-RAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~-~~~~~~l~~~g 289 (291)
.+|++++++|+...+ ...++.|++++
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~GA 335 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNNA 335 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCCC
Confidence 489999999988764 88999998873
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.81 E-value=4.5e-05 Score=67.18 Aligned_cols=93 Identities=25% Similarity=0.403 Sum_probs=65.7
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHh--hc
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVD--LT 261 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~--~~ 261 (291)
...++++++||.+|+|. |..+.++++..+.. +|+++|.+++.++.+++. +.+.+.... .+ +.+ +.
T Consensus 72 ~~~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~---~d----~~~l~~~ 143 (272)
T PRK11873 72 LAELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRL---GE----IEALPVA 143 (272)
T ss_pred hccCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEE---cc----hhhCCCC
Confidence 35678999999999988 98888888888753 799999999999888763 322111000 11 222 22
Q ss_pred CCCccEEEEcC------CChHHHHHHHHHhhccCC
Q 022865 262 DGGVDYSFECI------GNVSVMRAALECCHKVSG 290 (291)
Q Consensus 262 ~gg~d~v~d~~------g~~~~~~~~~~~l~~~gg 290 (291)
.+.||+|+... .....++.+.+.|+++ |
T Consensus 144 ~~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpG-G 177 (272)
T PRK11873 144 DNSVDVIISNCVINLSPDKERVFKEAFRVLKPG-G 177 (272)
T ss_pred CCceeEEEEcCcccCCCCHHHHHHHHHHHcCCC-c
Confidence 34799888543 3356799999999999 5
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00027 Score=61.59 Aligned_cols=123 Identities=22% Similarity=0.228 Sum_probs=74.4
Q ss_pred eeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 149 FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 149 ~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
|.+|.. +...++.+++++++..+.-- .|.. ++... ..+.++++||-+|+|. |.+++.+++ .|..+|+++|.
T Consensus 79 ~~~~~~-~~~~~i~i~p~~afgtg~h~----tt~~-~l~~l~~~~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDi 150 (250)
T PRK00517 79 WEDPPD-PDEINIELDPGMAFGTGTHP----TTRL-CLEALEKLVLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDI 150 (250)
T ss_pred CcCCCC-CCeEEEEECCCCccCCCCCH----HHHH-HHHHHHhhcCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEEC
Confidence 444544 66788899988876654321 1111 11111 1256889999999987 888876554 67767999999
Q ss_pred ChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC--CccEEEEcCCCh---HHHHHHHHHhhccC
Q 022865 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNV---SVMRAALECCHKVS 289 (291)
Q Consensus 228 ~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g--g~d~v~d~~g~~---~~~~~~~~~l~~~g 289 (291)
++...+.+++.....-+. + .. ....+ .||+|+...... ..++.+.+.|+++|
T Consensus 151 s~~~l~~A~~n~~~~~~~--~-~~-------~~~~~~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG 207 (250)
T PRK00517 151 DPQAVEAARENAELNGVE--L-NV-------YLPQGDLKADVIVANILANPLLELAPDLARLLKPGG 207 (250)
T ss_pred CHHHHHHHHHHHHHcCCC--c-eE-------EEccCCCCcCEEEEcCcHHHHHHHHHHHHHhcCCCc
Confidence 999888876532110000 0 00 01111 589888765542 34567778888883
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=97.75 E-value=0.0012 Score=58.86 Aligned_cols=127 Identities=16% Similarity=0.125 Sum_probs=80.1
Q ss_pred ceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhc---CCCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeE
Q 022865 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA---KVEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRV 222 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~---~~~~g~~vlI~G~-g~vG~~ai~~a~-~~g~~~v 222 (291)
.|-+|..+..+..+. | .....++..-+ .+.|+|. +.+.. ..-..+.|+|.++ +..++..+..++ ..+.-++
T Consensus 90 ~YN~Y~r~~~d~~y~-~-~~e~~~~LlrP-Lf~Tsfl-l~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~ 165 (314)
T PF11017_consen 90 IYNQYLRVSADPAYD-P-EREDWQMLLRP-LFITSFL-LDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKV 165 (314)
T ss_pred hhhceeecCCCcccC-c-chhHHHHHHHH-HHHHHHH-HHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceE
Confidence 456666666554431 1 11122222223 5677775 32222 2334567788877 888988888887 4555489
Q ss_pred EEEcCChhhHHHHHhcCC-CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 223 IGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 223 ~~~~~~~~~~~~~~~~ga-~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
|++ ++....++.+.+|. |+++.|++ |.++....--+++|+.|+..+.....+.+.+
T Consensus 166 vgl-TS~~N~~Fve~lg~Yd~V~~Yd~--------i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d 222 (314)
T PF11017_consen 166 VGL-TSARNVAFVESLGCYDEVLTYDD--------IDSLDAPQPVVIVDFAGNGEVLAALHEHLGD 222 (314)
T ss_pred EEE-ecCcchhhhhccCCceEEeehhh--------hhhccCCCCEEEEECCCCHHHHHHHHHHHhh
Confidence 999 55566678899996 66777764 4444334567999999998877776665543
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=4.9e-05 Score=73.97 Aligned_cols=81 Identities=26% Similarity=0.343 Sum_probs=59.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---------------------hhhHHHHHhcCCCEEeCCCC-
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---------------------PKKFDRAKNFGVTEFVNPKD- 248 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~---------------------~~~~~~~~~~ga~~~i~~~~- 248 (291)
...+|++|+|+|+|++|+++++.++.+|+ +|++++.. +.+++.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~-~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGH-AVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 36789999999999999999999999999 78888743 35677788899876665432
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
.+... +.+ ..++|+||+++|....
T Consensus 212 ~~~~~-~~~----~~~~D~Vi~AtG~~~~ 235 (564)
T PRK12771 212 EDITL-EQL----EGEFDAVFVAIGAQLG 235 (564)
T ss_pred CcCCH-HHH----HhhCCEEEEeeCCCCC
Confidence 11111 111 2269999999997543
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00032 Score=55.17 Aligned_cols=73 Identities=25% Similarity=0.354 Sum_probs=52.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCC--EEeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
++.+++|+|+|+.|.+++..+...|+++|+.+.++.+|.+.+ ++++.. ..+.+.+ +.+.+ ..+|+||+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~----~~~~~-----~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED----LEEAL-----QEADIVIN 81 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG----HCHHH-----HTESEEEE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH----HHHHH-----hhCCeEEE
Confidence 578999999999999999999999998899999999886655 455332 1333322 11111 15999999
Q ss_pred cCCCh
Q 022865 271 CIGNV 275 (291)
Q Consensus 271 ~~g~~ 275 (291)
|++..
T Consensus 82 aT~~~ 86 (135)
T PF01488_consen 82 ATPSG 86 (135)
T ss_dssp -SSTT
T ss_pred ecCCC
Confidence 98864
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00038 Score=64.14 Aligned_cols=88 Identities=19% Similarity=0.197 Sum_probs=59.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.+|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+. .++........+ . +.+.+... .+|+||+++
T Consensus 166 ~~~~VlViGaG~vG~~aa~~a~~lGa-~V~v~d~~~~~~~~l~~~~g~~v~~~~~~--~---~~l~~~l~-~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGGGVVGTNAAKMANGLGA-TVTILDINIDRLRQLDAEFGGRIHTRYSN--A---YEIEDAVK-RADLLIGAV 238 (370)
T ss_pred CCceEEEEcCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcCceeEeccCC--H---HHHHHHHc-cCCEEEEcc
Confidence 34569999999999999999999999 8999999988877664 455432222221 1 12333222 589999998
Q ss_pred C---C--hH-HHHHHHHHhhcc
Q 022865 273 G---N--VS-VMRAALECCHKV 288 (291)
Q Consensus 273 g---~--~~-~~~~~~~~l~~~ 288 (291)
+ . +. ..+..++.++++
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g 260 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPG 260 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCC
Confidence 3 2 22 135666666665
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00031 Score=58.79 Aligned_cols=95 Identities=19% Similarity=0.223 Sum_probs=71.3
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.....++++++||-+|+|. |+.++-+++..+ +|+.+++.++-.+.+ +.+|...+.....+. ...+.
T Consensus 64 m~~~L~~~~g~~VLEIGtGs-GY~aAvla~l~~--~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG------~~G~~ 134 (209)
T COG2518 64 MLQLLELKPGDRVLEIGTGS-GYQAAVLARLVG--RVVSIERIEELAEQARRNLETLGYENVTVRHGDG------SKGWP 134 (209)
T ss_pred HHHHhCCCCCCeEEEECCCc-hHHHHHHHHHhC--eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc------ccCCC
Confidence 45778899999999999876 999999999888 899999999855554 457774433222211 11222
Q ss_pred C-CCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 262 D-GGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~-gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
. +.||.|+-+.+.+..-+..++.|+++|
T Consensus 135 ~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gG 163 (209)
T COG2518 135 EEAPYDRIIVTAAAPEVPEALLDQLKPGG 163 (209)
T ss_pred CCCCcCEEEEeeccCCCCHHHHHhcccCC
Confidence 2 389999999898887889999999993
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00076 Score=63.46 Aligned_cols=83 Identities=27% Similarity=0.358 Sum_probs=63.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|+.. . ++.+.+ ..+|+|+.+
T Consensus 251 ~LaGKtVgVIG~G~IGr~vA~rL~a~Ga-~ViV~e~dp~~a~~A~~~G~~~-~-------~leell-----~~ADIVI~a 316 (476)
T PTZ00075 251 MIAGKTVVVCGYGDVGKGCAQALRGFGA-RVVVTEIDPICALQAAMEGYQV-V-------TLEDVV-----ETADIFVTA 316 (476)
T ss_pred CcCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHhcCcee-c-------cHHHHH-----hcCCEEEEC
Confidence 3478999999999999999999999999 8999988877665555556531 1 122222 258999999
Q ss_pred CCChHHHH-HHHHHhhcc
Q 022865 272 IGNVSVMR-AALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~-~~~~~l~~~ 288 (291)
+|+...+. ..++.|+++
T Consensus 317 tGt~~iI~~e~~~~MKpG 334 (476)
T PTZ00075 317 TGNKDIITLEHMRRMKNN 334 (476)
T ss_pred CCcccccCHHHHhccCCC
Confidence 99888774 788888887
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00037 Score=65.44 Aligned_cols=90 Identities=19% Similarity=0.208 Sum_probs=62.6
Q ss_pred cchhhhhhhhhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchH
Q 022865 178 GVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPI 253 (291)
Q Consensus 178 ~~~ta~~~~~~~~~---~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~ 253 (291)
+.+.++.++..... -.++++|+|+|+|.+|.++++.++..|+.+|++++++.++.+ +++++|.+ ++.. .+.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~----~~~ 236 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL----DEL 236 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH----HHH
Confidence 44555555432222 257789999999999999999999999878999999988854 77778753 3222 112
Q ss_pred HHHHHhhcCCCccEEEEcCCChHH
Q 022865 254 QQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 254 ~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
.+.. .++|+||+|+|.+..
T Consensus 237 ----~~~l-~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 237 ----PEAL-AEADIVISSTGAPHP 255 (423)
T ss_pred ----HHHh-ccCCEEEECCCCCCc
Confidence 2211 258999999997543
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00061 Score=67.90 Aligned_cols=113 Identities=24% Similarity=0.302 Sum_probs=72.5
Q ss_pred ceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc
Q 022865 148 TFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 148 ~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
.+++|..++...++.+ +..+++++.....+ .....+++++||+|+ |++|+..++.+...|+ +|++++
T Consensus 386 ~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~~----------~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga-~Vvl~~ 453 (681)
T PRK08324 386 AVGRYEPLSEQEAFDI-EYWSLEQAKLQRMP----------KPKPLAGKVALVTGAAGGIGKATAKRLAAEGA-CVVLAD 453 (681)
T ss_pred hcCCccCCChhhhcce-eeehhhhhhhhcCC----------CCcCCCCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEe
Confidence 5667777777666666 55665665422100 122336789999987 9999999999999999 899999
Q ss_pred CChhhHHHHH-hcCC--C-EE--eCCCCCCchHHHHHHhhc--CCCccEEEEcCC
Q 022865 227 IDPKKFDRAK-NFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGGVDYSFECIG 273 (291)
Q Consensus 227 ~~~~~~~~~~-~~ga--~-~~--i~~~~~~~~~~~~v~~~~--~gg~d~v~d~~g 273 (291)
++.++++.+. +++. . .. .|..+ ..++.+.+.+.. .+++|+||+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd-~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTD-EAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988766553 3433 1 12 23222 233333343322 247999999998
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0013 Score=56.31 Aligned_cols=79 Identities=19% Similarity=0.336 Sum_probs=58.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC----CEEeCCCCCCchHHHHHHhhcC--CCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV----TEFVNPKDHDKPIQQVLVDLTD--GGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga----~~~i~~~~~~~~~~~~v~~~~~--gg~ 265 (291)
+++.++|.|+ +++|.+.++.....|+ +|+.+.+..++++.+ .+++. ...+|..+ ..+....+..+.. +.+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~-~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD-~~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGA-KVVLAARREERLEALADEIGAGAALALALDVTD-RAAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCC-eEEEEeccHHHHHHHHHhhccCceEEEeeccCC-HHHHHHHHHHHHHhhCcc
Confidence 3478899998 9999999999999999 999999999988766 46773 12334433 2344445554443 379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+.+|..|-
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999884
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0022 Score=56.50 Aligned_cols=78 Identities=17% Similarity=0.252 Sum_probs=55.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHh---hcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVD---LTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~---~~~gg~d~v 268 (291)
.++++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.+ ...+.+|++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~-~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGW-RVFATCRKEEDVAALEAEGLEAFQLDYAE-PESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCceEEEccCCC-HHHHHHHHHHHHHHcCCCccEE
Confidence 3578999988 9999999988888899 89999999888877766555433 23332 2333333333 233579999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
|++.|
T Consensus 81 i~~Ag 85 (277)
T PRK05993 81 FNNGA 85 (277)
T ss_pred EECCC
Confidence 99976
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0016 Score=57.87 Aligned_cols=83 Identities=24% Similarity=0.302 Sum_probs=58.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+++++|+|.|.+|..++..++.+|+ +|+++++++++++.+.+++.. .+.. .+ +.+.. ..+|+||++++
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~-~V~v~~R~~~~~~~~~~~g~~-~~~~----~~----l~~~l-~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGA-RVFVGARSSADLARITEMGLI-PFPL----NK----LEEKV-AEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCe-eecH----HH----HHHHh-ccCCEEEECCC
Confidence 47899999999999999999999998 999999998887777666643 1111 11 22222 25899999987
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
....-...++.+++
T Consensus 219 ~~ii~~~~l~~~k~ 232 (287)
T TIGR02853 219 ALVLTADVLSKLPK 232 (287)
T ss_pred hHHhCHHHHhcCCC
Confidence 54322334454543
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00095 Score=59.42 Aligned_cols=89 Identities=22% Similarity=0.223 Sum_probs=57.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCE-EeCCCCCCchHHHHHHhhcCCCcc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~-~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
..++++||-+|+|. |.+++.+++ +|..+|+++|.++..++.+++. +... +..... + ......++||
T Consensus 157 ~~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~----~~~~~~~~fD 227 (288)
T TIGR00406 157 DLKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---Y----LEQPIEGKAD 227 (288)
T ss_pred cCCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---c----cccccCCCce
Confidence 45788999999988 888877665 5777999999999888777653 2211 111110 0 1122234799
Q ss_pred EEEEcCCCh---HHHHHHHHHhhccC
Q 022865 267 YSFECIGNV---SVMRAALECCHKVS 289 (291)
Q Consensus 267 ~v~d~~g~~---~~~~~~~~~l~~~g 289 (291)
+|+...... ..+..+.+.|+++|
T Consensus 228 lVvan~~~~~l~~ll~~~~~~LkpgG 253 (288)
T TIGR00406 228 VIVANILAEVIKELYPQFSRLVKPGG 253 (288)
T ss_pred EEEEecCHHHHHHHHHHHHHHcCCCc
Confidence 998765432 44667778888883
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0024 Score=58.68 Aligned_cols=86 Identities=23% Similarity=0.250 Sum_probs=60.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---CC-EEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---VT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g---a~-~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+|||+|+|.+|+.+++.+.+.+-.+|+..+++.++.+.+.+.. .. ..+|..+ .+.+.++.. ++|+||++
T Consensus 2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d-----~~al~~li~-~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD-----VDALVALIK-DFDLVINA 75 (389)
T ss_pred CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC-----hHHHHHHHh-cCCEEEEe
Confidence 47899999999999999998888559999999999888886653 11 1233332 223333333 35999999
Q ss_pred CCChHHHHHHHHHhhc
Q 022865 272 IGNVSVMRAALECCHK 287 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~ 287 (291)
.+.......+-.|++.
T Consensus 76 ~p~~~~~~i~ka~i~~ 91 (389)
T COG1748 76 APPFVDLTILKACIKT 91 (389)
T ss_pred CCchhhHHHHHHHHHh
Confidence 9987766554455443
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0036 Score=48.92 Aligned_cols=52 Identities=33% Similarity=0.526 Sum_probs=41.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
..++.+++++|.| .|...+..+..+|. .|+++|.+++..+.+++.+.+.+.+
T Consensus 14 ~~~~~kileIG~G-fG~~vA~~L~~~G~-~ViaIDi~~~aV~~a~~~~~~~v~d 65 (134)
T PRK04148 14 KGKNKKIVELGIG-FYFKVAKKLKESGF-DVIVIDINEKAVEKAKKLGLNAFVD 65 (134)
T ss_pred cccCCEEEEEEec-CCHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhCCeEEEC
Confidence 3456789999999 78766666668898 9999999999999888887655443
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0029 Score=55.49 Aligned_cols=79 Identities=22% Similarity=0.339 Sum_probs=54.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
++++++|+|+ |.+|...++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.+.. .+++|++|
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGY-TVYGAARRVDKMEDLASLGVHPLSLDVTD-EASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEE
Confidence 3578999988 9999999988888899 89999998888765554444322 23322 233434444322 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99884
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.003 Score=55.41 Aligned_cols=77 Identities=23% Similarity=0.373 Sum_probs=54.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEEEc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~d~ 271 (291)
+++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+.+...+ .|..+ ..++.+.+.... .+++|++|++
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~vi~~ 79 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGY-EVWATARKAEDVEALAAAGFTAVQLDVND-GAALARLAEELEAEHGGLDVLINN 79 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCCeEEEeeCCC-HHHHHHHHHHHHHhcCCCCEEEEC
Confidence 47899988 9999999998888899 89999998887776665554332 23332 234444444432 2479999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 80 ag~ 82 (274)
T PRK05693 80 AGY 82 (274)
T ss_pred CCC
Confidence 983
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0048 Score=51.66 Aligned_cols=96 Identities=23% Similarity=0.385 Sum_probs=65.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcC-CCEEeCCCCCCchHHHHHHhhc
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFG-VTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~----~~g-a~~~i~~~~~~~~~~~~v~~~~ 261 (291)
....+.++++||-+|+|. |.+++++++.++ ..+|+++|.+++.++.++ +++ .+.+..... +..+.+...
T Consensus 34 ~~l~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~---d~~~~l~~~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG---EAPEILFTI- 108 (198)
T ss_pred HHcCCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe---chhhhHhhc-
Confidence 456778999999999988 999999998875 348999999999887664 355 222221111 122222222
Q ss_pred CCCccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
.+.+|.||...+. ...+..+.+.|+++
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~Lkpg 138 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKG 138 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCC
Confidence 2479999986543 45677888889988
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0057 Score=53.44 Aligned_cols=81 Identities=19% Similarity=0.247 Sum_probs=55.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE-EeCCCCCCchHHHHHH-hhcC--
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-FVNPKDHDKPIQQVLV-DLTD-- 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~-~i~~~~~~~~~~~~v~-~~~~-- 262 (291)
..+.++||+|+ +++|...+..+...|+ +++.+.++++|++.+. + .+... ++..+-.+.+-.+.+. ++..
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~-~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGY-NLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 45789999998 9999998888888899 9999999999987663 2 33222 3322211233333333 3332
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
..+|+.+|++|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 279999999983
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0054 Score=52.94 Aligned_cols=77 Identities=25% Similarity=0.333 Sum_probs=54.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHH---hhcCCCccEEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLV---DLTDGGVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~---~~~~gg~d~v~d 270 (291)
+++||+|+ |.+|...++.+...|+ +|++++++.++++.+++.++..+. |..+ ..++.+.+. ....+.+|.++.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~i~~~~~~~~~~ii~ 80 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGY-RVLAACRKPDDVARMNSLGFTGILLDLDD-PESVERAADEVIALTDNRLYGLFN 80 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHhHHHHhCCCeEEEeecCC-HHHHHHHHHHHHHhcCCCCeEEEE
Confidence 57999998 9999999999988998 899999999888877777764432 3322 222222222 333457899998
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 81 ~ag~ 84 (256)
T PRK08017 81 NAGF 84 (256)
T ss_pred CCCC
Confidence 8773
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0028 Score=51.72 Aligned_cols=47 Identities=34% Similarity=0.423 Sum_probs=40.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
..+|+|+|+|.+|..|+.+++.+|+ +++..+...++++..+..++..
T Consensus 20 p~~vvv~G~G~vg~gA~~~~~~lGa-~v~~~d~~~~~~~~~~~~~~~~ 66 (168)
T PF01262_consen 20 PAKVVVTGAGRVGQGAAEIAKGLGA-EVVVPDERPERLRQLESLGAYF 66 (168)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHTT--EEEEEESSHHHHHHHHHTTTEE
T ss_pred CeEEEEECCCHHHHHHHHHHhHCCC-EEEeccCCHHHHHhhhcccCce
Confidence 3689999999999999999999999 8999999999888888777644
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.0072 Score=49.46 Aligned_cols=83 Identities=25% Similarity=0.364 Sum_probs=55.9
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC--
Q 022865 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN-- 274 (291)
Q Consensus 198 vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~-- 274 (291)
|+|+|+ |.+|...++.+...|. +|+++.+++++.+. ..+.+ ++..+-.+. +.+.+... ++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~-~V~~~~R~~~~~~~--~~~~~-~~~~d~~d~---~~~~~al~-~~d~vi~~~~~~~ 72 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGH-EVTALVRSPSKAED--SPGVE-IIQGDLFDP---DSVKAALK-GADAVIHAAGPPP 72 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTS-EEEEEESSGGGHHH--CTTEE-EEESCTTCH---HHHHHHHT-TSSEEEECCHSTT
T ss_pred eEEECCCChHHHHHHHHHHHCCC-EEEEEecCchhccc--ccccc-cceeeehhh---hhhhhhhh-hcchhhhhhhhhc
Confidence 689998 9999999999999997 99999999998776 33443 332222122 23333332 69999999984
Q ss_pred --hHHHHHHHHHhhcc
Q 022865 275 --VSVMRAALECCHKV 288 (291)
Q Consensus 275 --~~~~~~~~~~l~~~ 288 (291)
....+..++.++..
T Consensus 73 ~~~~~~~~~~~a~~~~ 88 (183)
T PF13460_consen 73 KDVDAAKNIIEAAKKA 88 (183)
T ss_dssp THHHHHHHHHHHHHHT
T ss_pred cccccccccccccccc
Confidence 23344555555443
|
... |
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.006 Score=55.06 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=67.2
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
.....++++++||.+|+|. |..++.+++..+. ..|++++.+++.++.+++ .|.+.+..... +..+.+..
T Consensus 73 l~~L~i~~g~~VLDIG~Gt-G~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g---D~~~~~~~-- 146 (322)
T PRK13943 73 MEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG---DGYYGVPE-- 146 (322)
T ss_pred HHhcCCCCCCEEEEEeCCc-cHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC---Chhhcccc--
Confidence 3556778999999999974 9999999998763 369999999987766643 56543322221 11111111
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+.+|+|+.+.+.+......++.|+++
T Consensus 147 ~~~fD~Ii~~~g~~~ip~~~~~~Lkpg 173 (322)
T PRK13943 147 FAPYDVIFVTVGVDEVPETWFTQLKEG 173 (322)
T ss_pred cCCccEEEECCchHHhHHHHHHhcCCC
Confidence 136999999988777677788889988
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0061 Score=50.84 Aligned_cols=77 Identities=21% Similarity=0.258 Sum_probs=55.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---CEEeCCCCCCchHHHHHHhhcCC--CccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQVLVDLTDG--GVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---~~~i~~~~~~~~~~~~v~~~~~g--g~d~v 268 (291)
|.+|||.|+ +++|+..++-...+|- +||...+++++++.+++.-. ..+.|..+ .....+.+.++... ..+++
T Consensus 5 gnTiLITGG~sGIGl~lak~f~elgN-~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d-~~~~~~lvewLkk~~P~lNvl 82 (245)
T COG3967 5 GNTILITGGASGIGLALAKRFLELGN-TVIICGRNEERLAEAKAENPEIHTEVCDVAD-RDSRRELVEWLKKEYPNLNVL 82 (245)
T ss_pred CcEEEEeCCcchhhHHHHHHHHHhCC-EEEEecCcHHHHHHHHhcCcchheeeecccc-hhhHHHHHHHHHhhCCchhee
Confidence 679999966 9999999988889998 89999999999999876433 22334333 12233334444333 57999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
+|+.|
T Consensus 83 iNNAG 87 (245)
T COG3967 83 INNAG 87 (245)
T ss_pred eeccc
Confidence 99988
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0039 Score=57.77 Aligned_cols=99 Identities=20% Similarity=0.250 Sum_probs=67.7
Q ss_pred hhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 182 a~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
.+..+.+...++++++||-+|+|. |..+..+++..|+ +|++++.+++.++.+++......+.... .++ .++
T Consensus 155 k~~~l~~~l~l~~g~rVLDIGcG~-G~~a~~la~~~g~-~V~giDlS~~~l~~A~~~~~~l~v~~~~--~D~----~~l- 225 (383)
T PRK11705 155 KLDLICRKLQLKPGMRVLDIGCGW-GGLARYAAEHYGV-SVVGVTISAEQQKLAQERCAGLPVEIRL--QDY----RDL- 225 (383)
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCc-cHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhccCeEEEEE--Cch----hhc-
Confidence 344456677889999999999864 7788888988888 9999999999999987643221111110 111 112
Q ss_pred CCCccEEEE-----cCCC---hHHHHHHHHHhhccC
Q 022865 262 DGGVDYSFE-----CIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||.|+. .+|. +..++.+.+.|+++|
T Consensus 226 ~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG 261 (383)
T PRK11705 226 NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDG 261 (383)
T ss_pred CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCc
Confidence 347998864 3443 356788888999983
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.011 Score=50.68 Aligned_cols=77 Identities=29% Similarity=0.425 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++.+... +.+...+ .|..+ .....+.+.. .+++|++|+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~--~~~~d~vi~ 83 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGA-RVVAAARNAAALDRLAGETGCEPLRLDVGD-DAAIRAALAA--AGAFDGLVN 83 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeEEEecCCC-HHHHHHHHHH--hCCCCEEEE
Confidence 4678999988 9999999999999999 8999988887765443 3444322 23322 1222222222 237999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 84 ~ag~ 87 (245)
T PRK07060 84 CAGI 87 (245)
T ss_pred CCCC
Confidence 9884
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.013 Score=48.48 Aligned_cols=95 Identities=22% Similarity=0.292 Sum_probs=57.6
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-Ccc
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVD 266 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d 266 (291)
...++++++||.+|+|+-++ +..+++.. +..+|+++|.++.. ...+.. .+..+..+....+.+.+.... ++|
T Consensus 27 ~~~i~~g~~VLDiG~GtG~~-~~~l~~~~~~~~~v~~vDis~~~----~~~~i~-~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGAAPGGW-SQVAVEQVGGKGRVIAVDLQPMK----PIENVD-FIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecCCCCHH-HHHHHHHhCCCceEEEEeccccc----cCCCce-EEEeeCCChhHHHHHHHHhCCCCcc
Confidence 44568999999999987554 44444443 44489999999864 112332 222221123333445554444 899
Q ss_pred EEEEc-----CCC------------hHHHHHHHHHhhccCC
Q 022865 267 YSFEC-----IGN------------VSVMRAALECCHKVSG 290 (291)
Q Consensus 267 ~v~d~-----~g~------------~~~~~~~~~~l~~~gg 290 (291)
+|+.. .|. ...+..+.++|+++ |
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~Lkpg-G 140 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPK-G 140 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCC-C
Confidence 99952 121 35688889999998 5
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0079 Score=56.23 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
-.+.+++|+|+|.+|.+++..+...|+.+|+++.++.++.+ ++.+++...++.+ +.+.+... .+|+||+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~--------~~l~~~l~-~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL--------SELPQLIK-KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH--------HHHHHHhc-cCCEEEEC
Confidence 35789999999999999999999999888999999877754 4445652122222 12222222 59999999
Q ss_pred CCChHH
Q 022865 272 IGNVSV 277 (291)
Q Consensus 272 ~g~~~~ 277 (291)
++.+..
T Consensus 250 T~a~~~ 255 (414)
T PRK13940 250 VNVLEY 255 (414)
T ss_pred cCCCCe
Confidence 998653
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0091 Score=51.67 Aligned_cols=79 Identities=28% Similarity=0.388 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
++++++|+|+ |.+|...++.+...|+ +|+++++++++.+.. .+++.... .|..+ ..++.+.+.+.. .+++|++
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 83 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGA-TVVVGDIDPEAGKAAADEVGGLFVPTDVTD-EDAVNALFDTAAETYGSVDIA 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHcCCcEEEeeCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 5789999998 9999999998888998 899998887766544 34443222 22222 223333333322 2379999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06057 84 FNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0097 Score=50.52 Aligned_cols=77 Identities=17% Similarity=0.211 Sum_probs=52.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++++|+|+ |.+|...+..+...|+ +|+++++++++.+.+++++....+ |..+ .+++.+.+..+..+++|++|.+.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGW-QVTATVRGPQQDTALQALPGVHIEKLDMND-PASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCC-EEEEEeCCCcchHHHHhccccceEEcCCCC-HHHHHHHHHHhhcCCCCEEEEcC
Confidence 47899987 9999998888888899 899999888776655554322222 2222 23344444444444899999988
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0065 Score=55.13 Aligned_cols=79 Identities=22% Similarity=0.384 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+ ++.|.+.. + |..+ .+++.+.+.+.. .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~-~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 83 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGA-RLVLAARDEEALQAVAEECRALGAEVLVVPTDVTD-ADQVKALATQAASFGG 83 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHhcC
Confidence 4678999988 9999999999989999 899999998877543 33454332 2 3322 223333332221 25
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~iD~lVnnAG~ 94 (330)
T PRK06139 84 RIDVWVNNVGV 94 (330)
T ss_pred CCCEEEECCCc
Confidence 79999999883
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0074 Score=48.66 Aligned_cols=83 Identities=27% Similarity=0.371 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++++|+|-|.+|.-.++.++.+|+ +|++++.++-++-.+..-|.+ +. ...+.+ ..+|++|.+
T Consensus 20 ~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga-~V~V~e~DPi~alqA~~dGf~-v~-------~~~~a~-----~~adi~vta 85 (162)
T PF00670_consen 20 MLAGKRVVVIGYGKVGKGIARALRGLGA-RVTVTEIDPIRALQAAMDGFE-VM-------TLEEAL-----RDADIFVTA 85 (162)
T ss_dssp --TTSEEEEE--SHHHHHHHHHHHHTT--EEEEE-SSHHHHHHHHHTT-E-EE--------HHHHT-----TT-SEEEE-
T ss_pred eeCCCEEEEeCCCcccHHHHHHHhhCCC-EEEEEECChHHHHHhhhcCcE-ec-------CHHHHH-----hhCCEEEEC
Confidence 4578999999999999999999999999 999999999876666555543 11 121222 258999999
Q ss_pred CCChHHH-HHHHHHhhcc
Q 022865 272 IGNVSVM-RAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~-~~~~~~l~~~ 288 (291)
+|+...+ ..-++.|+++
T Consensus 86 TG~~~vi~~e~~~~mkdg 103 (162)
T PF00670_consen 86 TGNKDVITGEHFRQMKDG 103 (162)
T ss_dssp SSSSSSB-HHHHHHS-TT
T ss_pred CCCccccCHHHHHHhcCC
Confidence 9986532 3555556554
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.017 Score=47.55 Aligned_cols=97 Identities=28% Similarity=0.335 Sum_probs=65.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....+++++.++=+|+|. |..++++++.....+|++++++++.+++.+ +||.+-+..... +..+.+..+.
T Consensus 28 s~L~~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g---~Ap~~L~~~~-- 101 (187)
T COG2242 28 SKLRPRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG---DAPEALPDLP-- 101 (187)
T ss_pred HhhCCCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec---cchHhhcCCC--
Confidence 456778999777778865 777888886655569999999999887774 578764433332 1222333321
Q ss_pred CccEEEEcCCC--hHHHHHHHHHhhccCCC
Q 022865 264 GVDYSFECIGN--VSVMRAALECCHKVSGT 291 (291)
Q Consensus 264 g~d~v~d~~g~--~~~~~~~~~~l~~~gg~ 291 (291)
.+|.+|---|. +..++.+++.|+++ ||
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~g-gr 130 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPG-GR 130 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcC-Ce
Confidence 58888865442 45678888888888 54
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.013 Score=49.62 Aligned_cols=77 Identities=18% Similarity=0.272 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
++++|+|+ |.+|...++.+...|+ +|+.++++.++.+.++..+.... .|..+ ...+.+.+.+...+++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGW-RVIATARDAAALAALQALGAEALALDVAD-PASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCC-EEEEEECCHHHHHHHHhccceEEEecCCC-HHHHHHHHHHhcCCCCCEEEECCC
Confidence 46889987 9999998887777898 89999898887776665554321 22222 233334333333337999999887
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0055 Score=54.38 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=36.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++++++|+|+|+.+.+++..+..+|+++|+++.++.+|.+.+
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~L 165 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRL 165 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 577999999999999999999999998999999998876544
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.011 Score=56.62 Aligned_cols=74 Identities=28% Similarity=0.303 Sum_probs=54.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+.++++|+|+|.|.+|++++.+++..|+ +|++.|..+++.+.++++|+. ++.... ..+.+ ..+|+|+.+
T Consensus 9 ~~~~~~v~V~G~G~sG~aa~~~L~~~G~-~v~~~D~~~~~~~~l~~~g~~-~~~~~~----~~~~l-----~~~D~VV~S 77 (488)
T PRK03369 9 LLPGAPVLVAGAGVTGRAVLAALTRFGA-RPTVCDDDPDALRPHAERGVA-TVSTSD----AVQQI-----ADYALVVTS 77 (488)
T ss_pred ccCCCeEEEEcCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHhCCCE-EEcCcc----hHhHh-----hcCCEEEEC
Confidence 5578899999999999999999999999 899999877776667777773 332211 11112 147999999
Q ss_pred CCChH
Q 022865 272 IGNVS 276 (291)
Q Consensus 272 ~g~~~ 276 (291)
.|-+.
T Consensus 78 pGi~~ 82 (488)
T PRK03369 78 PGFRP 82 (488)
T ss_pred CCCCC
Confidence 88643
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.015 Score=49.50 Aligned_cols=77 Identities=22% Similarity=0.249 Sum_probs=49.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH-HHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD-RAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~-~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+ +..+++...+ .|..+ ...+.+.+.+ .+++|++|
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~-~~~~~~~~~~--~~~id~li 80 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGA-NVRFTYAGSKDAAERLAQETGATAVQTDSAD-RDAVIDVVRK--SGALDILV 80 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHhCCeEEecCCCC-HHHHHHHHHH--hCCCcEEE
Confidence 4679999987 9999999998888999 7776644 444443 3345555332 22221 2233333433 24699999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 81 ~~ag~ 85 (237)
T PRK12742 81 VNAGI 85 (237)
T ss_pred ECCCC
Confidence 99874
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.013 Score=52.20 Aligned_cols=79 Identities=22% Similarity=0.336 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--CEE---eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TEF---VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga--~~~---i~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++. ... .|..+ ..+..+.+.+.. .++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGA-KLALVDLEEAELAALAAELGGDDRVLTVVADVTD-LAAMQAAAEEAVERFGG 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 5689999988 9999999999989999 899998988876544 44542 111 23322 233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 9999999984
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.012 Score=49.92 Aligned_cols=79 Identities=23% Similarity=0.253 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-eCCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ |.+|..+++.+...|+ +|+.++++.++.+.. ++.+...+ .|..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGA-RVALIGRGAAPLSQTLPGVPADALRIGGIDLVD-PQAARRAVDEVNRQFGRL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCC-eEEEEeCChHhHHHHHHHHhhcCceEEEeecCC-HHHHHHHHHHHHHHhCCc
Confidence 3679999988 9999999988888899 899998877653322 22333222 12221 223333333322 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998874
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.012 Score=51.21 Aligned_cols=78 Identities=22% Similarity=0.261 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCCE-Ee--CCCCCCchHHHHHHhhcC--CCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTE-FV--NPKDHDKPIQQVLVDLTD--GGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-ga~~-~i--~~~~~~~~~~~~v~~~~~--gg~d 266 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++++.+.+. +... .+ |..+ ..+..+.+.+... +.+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGA-RVAVLDKSAAGLQELEAAHGDAVVGVEGDVRS-LDDHKEAVARCVAAFGKID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCceEEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 4688999987 9999999988888999 899998888776655442 3211 12 2222 2233344443321 4789
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999987
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.013 Score=50.89 Aligned_cols=80 Identities=23% Similarity=0.236 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCC-EEeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EFVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~-~~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+.+ ++.. ..+..+- +..++...+.+.. .+.+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGA-RVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999987 9999999988888999 89999998887665543 3321 1221111 1223333343322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 84 li~~ag~ 90 (263)
T PRK06200 84 FVGNAGI 90 (263)
T ss_pred EEECCCC
Confidence 9999883
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.011 Score=51.10 Aligned_cols=82 Identities=24% Similarity=0.246 Sum_probs=53.6
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCC--EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT--EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~--~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
..++.++||+|+ |.+|...+..+...|+ +|+.++++++..+...+ +... ..+ +..+ ..++.+.+.+.. -+
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFAEAGA-RVHVCDVSEAALAATAARLPGAKVTATVADVAD-PAQVERVFDTAVERFG 85 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 357789999988 9999999998888999 79999888776655433 2211 222 2222 223333333321 13
Q ss_pred CccEEEEcCCCh
Q 022865 264 GVDYSFECIGNV 275 (291)
Q Consensus 264 g~d~v~d~~g~~ 275 (291)
++|.||.+.|..
T Consensus 86 ~~d~vi~~ag~~ 97 (264)
T PRK12829 86 GLDVLVNNAGIA 97 (264)
T ss_pred CCCEEEECCCCC
Confidence 799999998753
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.023 Score=47.85 Aligned_cols=35 Identities=29% Similarity=0.346 Sum_probs=31.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|.|++|..+++.+..+|..+++.+|.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 34679999999999999999999999899999877
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0067 Score=53.65 Aligned_cols=43 Identities=26% Similarity=0.348 Sum_probs=38.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
++++++|+|+|+.+.+++..++..|+++|+++.++.+|.+.+.
T Consensus 125 ~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La 167 (283)
T COG0169 125 TGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELA 167 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence 5789999999999999999999999889999999998866554
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.013 Score=51.06 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCC-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVT-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++++.+. + .+.. ..+ |..+ .....+.+.+.. -+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGA-DVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAH-PEATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5689999988 9999999998888999 8999988887655432 2 2322 122 2222 223333333321 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.014 Score=50.44 Aligned_cols=80 Identities=20% Similarity=0.285 Sum_probs=53.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c---CC-CEEe--CCCCCCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F---GV-TEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~---ga-~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++++|+|+ |.+|..++..+...|+ +|+++.+++++++.+.+ + +. ..++ |..+ ..++.+.+.+.. .
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGA-KVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTD-YQSIKAAVAHAETEA 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhc
Confidence 35689999987 9999999988888999 89999898887654432 1 21 1222 2222 233444343322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|++|++.|.
T Consensus 85 ~~~d~li~~ag~ 96 (258)
T PRK06949 85 GTIDILVNNSGV 96 (258)
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.015 Score=49.57 Aligned_cols=80 Identities=25% Similarity=0.295 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCCEEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVTEFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~---ga~~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
++++++|+|+ |.+|..+++.+...|+ +|+.+++++++++.+ +++ +.-..+..+- +..+..+.+.+.. .+++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGA-QVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999988 9999999999999999 899999988876555 222 2222232221 1233333333322 2368
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|.++.+.|.
T Consensus 83 d~ii~~ag~ 91 (238)
T PRK05786 83 DGLVVTVGG 91 (238)
T ss_pred CEEEEcCCC
Confidence 999998874
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.015 Score=48.78 Aligned_cols=80 Identities=18% Similarity=0.259 Sum_probs=59.9
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCCCC--chHHHHHHhhcCCCccE
Q 022865 194 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKDHD--KPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~--g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~~~--~~~~~~v~~~~~gg~d~ 267 (291)
..+.|||.|+ |++|.+.+.-...-|+ .|+++.+.-+...-+. ++|..- -+|..+++ ..+.+++++.++|+.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~-~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGY-LVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCe-EEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 3467899875 9999998888888899 9999999988876665 777522 23433321 24566777777889999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
.+|..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9998885
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.017 Score=50.58 Aligned_cols=78 Identities=27% Similarity=0.292 Sum_probs=52.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
+.++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++....+ |..+ .+++.+.+.+.. .+++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGA-RVAIGDLDEALAKETAAELGLVVGGPLDVTD-PASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 578999988 9999998888888899 888888888876544 344422222 3322 233333343332 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+++.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999884
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.027 Score=50.00 Aligned_cols=42 Identities=29% Similarity=0.372 Sum_probs=37.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+++++|+|+|+.|.+++..+..+|+++|+.++++.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 457899999999999999999999998999999998876554
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.019 Score=50.08 Aligned_cols=79 Identities=20% Similarity=0.348 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEe--CCCCCCchHHHHHHhhc-CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFV--NPKDHDKPIQQVLVDLT-DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i--~~~~~~~~~~~~v~~~~-~g 263 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++ +.+ ..+ |..+ ..+..+.+.+.. .+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~g 84 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGA-DVILLSRNEENLKKAREKIKSESNVDVSYIVADLTK-REDLERTVKELKNIG 84 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCC-HHHHHHHHHHHHhhC
Confidence 4688999988 9999999998888999 8999988887765443 22 322 122 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 85 ~iD~lv~nag~ 95 (263)
T PRK08339 85 EPDIFFFSTGG 95 (263)
T ss_pred CCcEEEECCCC
Confidence 79999999874
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.015 Score=50.17 Aligned_cols=79 Identities=20% Similarity=0.213 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-E--eCCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-F--VNPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~--i~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. + .+... . .|..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGA-QVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQ-HQQVTSMLDQVTAELG 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4689999988 9999999988888999 8999988887665443 2 23221 2 22222 233444443322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.017 Score=50.69 Aligned_cols=78 Identities=23% Similarity=0.229 Sum_probs=52.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-E-Ee--CCCCCCchHHHHHHhhcC--CCccE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-E-FV--NPKDHDKPIQQVLVDLTD--GGVDY 267 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~-~i--~~~~~~~~~~~~v~~~~~--gg~d~ 267 (291)
++++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+.... . .+ |..+ ...+.+.+.+... +++|+
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d-~~~~~~~~~~~~~~~~~~d~ 81 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGH-RVVGTVRSEAARADFEALHPDRALARLLDVTD-FDAIDAVVADAEATFGPIDV 81 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcC-EEEEEeCCHHHHHHHHhhcCCCeeEEEccCCC-HHHHHHHHHHHHHHhCCCCE
Confidence 568999988 9999999988888899 899999988877655443221 1 22 2222 2333333443221 36999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++++.|.
T Consensus 82 vv~~ag~ 88 (277)
T PRK06180 82 LVNNAGY 88 (277)
T ss_pred EEECCCc
Confidence 9999885
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.021 Score=50.38 Aligned_cols=44 Identities=27% Similarity=0.262 Sum_probs=37.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
...+++++|+|+|+.+.+++..++.+|+.+|+++.++.+|.+.+
T Consensus 119 ~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~l 162 (272)
T PRK12550 119 VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKAL 162 (272)
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence 34456899999999999999999999998899999998876554
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.02 Score=47.15 Aligned_cols=46 Identities=46% Similarity=0.672 Sum_probs=37.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
-.|++|.|+|.|.+|...++.++.+|+ +|++.++.....+...+++
T Consensus 34 l~g~tvgIiG~G~IG~~vA~~l~~fG~-~V~~~d~~~~~~~~~~~~~ 79 (178)
T PF02826_consen 34 LRGKTVGIIGYGRIGRAVARRLKAFGM-RVIGYDRSPKPEEGADEFG 79 (178)
T ss_dssp STTSEEEEESTSHHHHHHHHHHHHTT--EEEEEESSCHHHHHHHHTT
T ss_pred cCCCEEEEEEEcCCcCeEeeeeecCCc-eeEEecccCChhhhccccc
Confidence 358899999999999999999999999 9999999888665334443
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.019 Score=48.84 Aligned_cols=80 Identities=21% Similarity=0.295 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---CEEeCCC-CCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFVNPK-DHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga---~~~i~~~-~~~~~~~~~v~~~~--~gg~ 265 (291)
++.+++|+|+ |.+|...++.+...|+ +|+++++++++++.+ +++.. -+.+..+ .+..++.+.+.+.. .+++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGY-KVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999998888878899 799998888765544 33321 1222211 11233444444332 1379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 84 d~vi~~ag~ 92 (237)
T PRK07326 84 DVLIANAGV 92 (237)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.019 Score=49.46 Aligned_cols=79 Identities=23% Similarity=0.258 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE--Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~--~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |.+|...++.+...|+ +|+.++++++..+...++.... .+ |..+ ..++...+.+.. .+++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGA-RVALLDRSEDVAEVAAQLLGGNAKGLVCDVSD-SQSVEAAVAAVISAFGRID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999998888888899 8999988877665555443221 22 2222 223333333322 13799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999884
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.02 Score=49.68 Aligned_cols=81 Identities=23% Similarity=0.369 Sum_probs=53.3
Q ss_pred CCCCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCCEE--e--CCCCCCchHHHHHHhh
Q 022865 192 VEPGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF--V--NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 192 ~~~g~~vlI~G~-g-~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-----~ga~~~--i--~~~~~~~~~~~~v~~~ 260 (291)
+.+++++||+|+ | ++|.+.++.+...|+ +|+++++++++++...+ ++...+ + |..+ ..++.+.+.+.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~ 91 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGA-RVVISDIHERRLGETADELAAELGLGRVEAVVCDVTS-EAQVDALIDAA 91 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCC-HHHHHHHHHHH
Confidence 345789999987 6 799999999999999 79998888876654432 443222 2 2222 22333333332
Q ss_pred c--CCCccEEEEcCCC
Q 022865 261 T--DGGVDYSFECIGN 274 (291)
Q Consensus 261 ~--~gg~d~v~d~~g~ 274 (291)
. .+++|++|++.|.
T Consensus 92 ~~~~g~id~li~~ag~ 107 (262)
T PRK07831 92 VERLGRLDVLVNNAGL 107 (262)
T ss_pred HHHcCCCCEEEECCCC
Confidence 2 2479999999984
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.024 Score=50.84 Aligned_cols=79 Identities=22% Similarity=0.218 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |++|...+..+...|+ +|++++++.++.+.+. ++..-..+ |..+ ..++.+.+.+.. .+++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~-~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d-~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGA-HVIVPARRPDVAREALAGIDGVEVVMLDLAD-LESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhhCeEEEccCCC-HHHHHHHHHHHHhcCCCCCE
Confidence 4678999988 9999998888888899 8999888887665432 33211222 2222 233434444332 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999873
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.024 Score=49.12 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCC--C-EEe--CCCCCCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGV--T-EFV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga--~-~~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+.++||+|+ |.+|...+..+...|+ +|+.+++++++++...+ +.. + ..+ |..+ ..++.+.+.+.. .+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGA-TLGLVARRTDALQAFAARLPKAARVSVYAADVRD-ADALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCC-HHHHHHHHHHHHHhCCCC
Confidence 468999987 9999998888888899 89999998887655432 221 1 112 2222 234444444332 2368
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999999873
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.035 Score=42.05 Aligned_cols=96 Identities=21% Similarity=0.298 Sum_probs=62.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....+.++++++-+|+|. |..+..+++..+..+|+++|.++...+.+++ ++...+..... +....+.. ...
T Consensus 13 ~~~~~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~ 87 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG---DAPEALED-SLP 87 (124)
T ss_pred HHcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec---cccccChh-hcC
Confidence 344566778899999977 8889999988754599999999988877643 33322111111 00000111 123
Q ss_pred CccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 264 GVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 264 g~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
.+|+|+-..+. ...++.+.+.|+++
T Consensus 88 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~g 115 (124)
T TIGR02469 88 EPDRVFIGGSGGLLQEILEAIWRRLRPG 115 (124)
T ss_pred CCCEEEECCcchhHHHHHHHHHHHcCCC
Confidence 79999876433 34688899999988
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.029 Score=50.67 Aligned_cols=80 Identities=18% Similarity=0.223 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE----EeCCCCCCchHHHHHHhhcCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE----FVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~----~i~~~~~~~~~~~~v~~~~~g 263 (291)
.|++++|+|+ +++|...+..+...|+ +|+.+++++++++.+. + .+... ..|..++..+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~-~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~ 130 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGL-NLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG 130 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC
Confidence 4789999998 9999988877777899 8999999998876542 2 22111 123322112333444444444
Q ss_pred -CccEEEEcCCC
Q 022865 264 -GVDYSFECIGN 274 (291)
Q Consensus 264 -g~d~v~d~~g~ 274 (291)
.+|++++++|.
T Consensus 131 ~didilVnnAG~ 142 (320)
T PLN02780 131 LDVGVLINNVGV 142 (320)
T ss_pred CCccEEEEecCc
Confidence 57799998873
|
|
| >TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.021 Score=54.40 Aligned_cols=78 Identities=31% Similarity=0.404 Sum_probs=54.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhcCCCEEeCCCCCCch
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDHDKP 252 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~---------------------~~~~~~~~~ga~~~i~~~~~~~~ 252 (291)
.+++|+|+|+|+.|+.++..++..|+ .|+.++..+ ...+.++++|.+..++..-. .+
T Consensus 140 ~~~~V~IIG~GpaGl~aA~~l~~~G~-~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~-~~ 217 (467)
T TIGR01318 140 TGKRVAVIGAGPAGLACADILARAGV-QVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVG-RD 217 (467)
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCC-eEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeC-Cc
Confidence 57899999999999999999999999 788887654 24566778887655443211 11
Q ss_pred HHHHHHhhcCCCccEEEEcCCChH
Q 022865 253 IQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 253 ~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
+ .+.++. .++|.||.++|...
T Consensus 218 ~--~~~~~~-~~~D~vilAtGa~~ 238 (467)
T TIGR01318 218 I--SLDDLL-EDYDAVFLGVGTYR 238 (467)
T ss_pred c--CHHHHH-hcCCEEEEEeCCCC
Confidence 0 112222 26999999999743
|
This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.025 Score=48.48 Aligned_cols=80 Identities=18% Similarity=0.299 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhcC--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++++.+ ++.+... .+..+- +..++.+.+..... ++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGA-KLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999988 9999999998888998 899998888765443 2234332 222221 11233333433322 47
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|.||++.|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999883
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.024 Score=48.57 Aligned_cols=80 Identities=21% Similarity=0.272 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC--CC-EEeCCC-CCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG--VT-EFVNPK-DHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~g--a~-~~i~~~-~~~~~~~~~v~~~~--~gg~ 265 (291)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. .+. .. ..+..+ .+..++...+.+.. .+.+
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGA-RVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4568999988 9999998888888899 7999999987765442 222 11 122111 12234444444321 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.025 Score=54.68 Aligned_cols=47 Identities=17% Similarity=0.150 Sum_probs=39.3
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
...+.+.++++||+|+ |.+|...++.+...|+ +|+++.++.++++.+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~-~Vval~Rn~ekl~~l 120 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSAQRAESL 120 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHH
Confidence 4556678899999998 9999999988888899 899988988876543
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.021 Score=49.60 Aligned_cols=79 Identities=25% Similarity=0.321 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCCEE----eCCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTEF----VNPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-----~ga~~~----i~~~~~~~~~~~~v~~~~-- 261 (291)
.+++++|+|+ +++|...++.+...|+ +|+.+++++++++.+.+ .+...+ .|..+ ..++.+.+.+..
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 84 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGA-SVAICGRDEERLASAEARLREKFPGARLLAARCDVLD-EADVAAFAAAVEAR 84 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4678999988 9999999988888999 89999898876554321 111121 23222 233333333332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++++++|.
T Consensus 85 ~g~id~li~~Ag~ 97 (265)
T PRK07062 85 FGGVDMLVNNAGQ 97 (265)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999884
|
|
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.043 Score=48.73 Aligned_cols=42 Identities=26% Similarity=0.271 Sum_probs=36.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++++++|+|+|+.+.+++..+..+|+++|+.++++.+|.+.+
T Consensus 126 ~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~L 167 (283)
T PRK14027 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_pred CCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHH
Confidence 467899999999999999888889998999999998876554
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.027 Score=50.06 Aligned_cols=80 Identities=23% Similarity=0.291 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.+++++|+|+ |++|...++.+...|+ +|++++++.++++.+.+ .+.+. .+..+- +..++.+.+.... .++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~-~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 117 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGA-TVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGG 117 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999999988888898 89999998877654432 23221 222221 1233333333221 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 118 id~li~~AG~ 127 (293)
T PRK05866 118 VDILINNAGR 127 (293)
T ss_pred CCEEEECCCC
Confidence 9999999884
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.045 Score=46.39 Aligned_cols=96 Identities=17% Similarity=0.223 Sum_probs=64.9
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~ 258 (291)
+.....++++++||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++ .|... ++..+.. ..+
T Consensus 68 ~~~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~-~~~----- 140 (212)
T PRK13942 68 MCELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGT-LGY----- 140 (212)
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcc-cCC-----
Confidence 44566788999999999876 7788888888763 389999999988777754 33321 2221110 000
Q ss_pred hhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 259 DLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
...+.||.|+-....+......++.|+++|
T Consensus 141 -~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG 170 (212)
T PRK13942 141 -EENAPYDRIYVTAAGPDIPKPLIEQLKDGG 170 (212)
T ss_pred -CcCCCcCEEEECCCcccchHHHHHhhCCCc
Confidence 112379998876666666778888999983
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.026 Score=48.85 Aligned_cols=80 Identities=18% Similarity=0.151 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.++.+++ +... .+..+- +..+....+.+.. .+++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGA-IPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-cEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999988 9999998888888899 788888887766544432 3221 222111 1223333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999983
|
|
| >PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.024 Score=56.21 Aligned_cols=76 Identities=29% Similarity=0.340 Sum_probs=55.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCCEEeCCCCC-Cc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-DK 251 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~---------------------~~~~~~~~ga~~~i~~~~~-~~ 251 (291)
.+++|+|+|+|+.|+.++..++.+|+ +|++++..+. +.++++++|.+..++..-. +.
T Consensus 309 ~~kkVaIIG~GpaGl~aA~~L~~~G~-~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGAGPAGLGCADILARAGV-QVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCC-cEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 47899999999999999999999999 7888887753 4566778887655544321 11
Q ss_pred hHHHHHHhhcCCCccEEEEcCCCh
Q 022865 252 PIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 252 ~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+ .++. .++|.||.++|..
T Consensus 388 ~~----~~l~-~~~DaV~latGa~ 406 (639)
T PRK12809 388 TF----SDLT-SEYDAVFIGVGTY 406 (639)
T ss_pred CH----HHHH-hcCCEEEEeCCCC
Confidence 22 2222 2699999999963
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.035 Score=48.22 Aligned_cols=80 Identities=24% Similarity=0.321 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCC-EEeCCCC-CCchHHHHHHhhc-CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFVNPKD-HDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--ga~-~~i~~~~-~~~~~~~~v~~~~-~gg~d 266 (291)
++.++||+|+ |.+|...+..+...|+ +|+++++++++++.+. ++ +.. ..+..+- +..+..+.+.... .+.+|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGA-RLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4678999987 9999998888888898 8999999887765543 22 211 1221111 1122222222221 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999875
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.03 Score=48.03 Aligned_cols=79 Identities=25% Similarity=0.324 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
++++++|.|+ |.+|...++.+...|+ +|+.+++++++++.. ++++... .+ |..+ ..+....+.... .+++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGA-RVAITGRDPASLEAARAELGESALVIRADAGD-VAAQKALAQALAEAFGRLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999988 9999999999889999 899998887765443 3455432 22 2221 122222222222 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.027 Score=51.19 Aligned_cols=79 Identities=19% Similarity=0.200 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++++.+ ++.|.+.. + |..+ ..++.+.+.... -+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~-~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d-~~~v~~~~~~~~~~~g 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGA-KVVLLARGEEGLEALAAEIRAAGGEALAVVADVAD-AEAVQAAADRAEEELG 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCC-HHHHHHHHHHHHHHCC
Confidence 4578999988 9999999988888999 899998988776543 23454332 2 3222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.03 Score=48.29 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=48.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-Ee--CCCCCCchHHHHHHhhcCCCcc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FV--NPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i--~~~~~~~~~~~~v~~~~~gg~d 266 (291)
++++||+|+ |.+|...++.+...|+ +|+++.+++++.+.+.+ .+... ++ |..+ . +.+.....+++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGH-NVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD--A---IDRAQAAEWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC--H---HHHHHHhcCCCC
Confidence 457999988 9999999999989998 88888887766544332 23221 21 2222 1 223333334799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 76 ~vi~~ag 82 (257)
T PRK09291 76 VLLNNAG 82 (257)
T ss_pred EEEECCC
Confidence 9999987
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.027 Score=52.15 Aligned_cols=85 Identities=27% Similarity=0.359 Sum_probs=50.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh--cCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN--FGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~--~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
|+|+|+|.+|..+++.+....- .+|++.+++.++++.+.+ .+... .+..+- .-.+.+.++.. +.|+|++|+|
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~---~~~~~l~~~~~-~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDV---NDPESLAELLR-GCDVVINCAG 76 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--T---TTHHHHHHHHT-TSSEEEE-SS
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEec---CCHHHHHHHHh-cCCEEEECCc
Confidence 6889999999999988887764 389999999999776653 22211 111111 11122444433 4699999999
Q ss_pred ChHHHHHHHHHhh
Q 022865 274 NVSVMRAALECCH 286 (291)
Q Consensus 274 ~~~~~~~~~~~l~ 286 (291)
.......+..|++
T Consensus 77 p~~~~~v~~~~i~ 89 (386)
T PF03435_consen 77 PFFGEPVARACIE 89 (386)
T ss_dssp GGGHHHHHHHHHH
T ss_pred cchhHHHHHHHHH
Confidence 7644444444443
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.033 Score=47.77 Aligned_cols=79 Identities=20% Similarity=0.283 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
.++++||+|+ |.+|...+..+...|+ +|+.+++++. ..+...+.+... .+ |..+ ..++...+.+.. .+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGA-DIVGAGRSEPSETQQQVEALGRRFLSLTADLSD-IEAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999988 9999998888888899 8988877652 123333444321 22 2222 233443444332 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999999874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.031 Score=47.95 Aligned_cols=80 Identities=26% Similarity=0.319 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---CCC-EEeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---GVT-EFVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~---ga~-~~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ .++ +.. ..+..+- +..+..+.+.+.. .++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGA-SVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999988 9999998888888898 899998887654333 221 221 1222211 1223333333221 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 9999999884
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.034 Score=47.95 Aligned_cols=79 Identities=23% Similarity=0.251 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+. ++ +... .+ |..+ ..++...+.+.. .+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGA-DVVLAARTAERLDEVAAEIDDLGRRALAVPTDITD-EDQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCC-HHHHHHHHHHHHHHcC
Confidence 5678999987 9999998888888999 8999988887654442 22 3221 22 2222 233333333322 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 79999999874
|
|
| >PRK00536 speE spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.015 Score=50.92 Aligned_cols=94 Identities=12% Similarity=-0.084 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccE-EEEc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY-SFEC 271 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~-v~d~ 271 (291)
...++|||+|+|- |.++-+++|+- .+|+.++-+++-.++++++-....-..++...++...+.+...+.+|+ ++|+
T Consensus 71 ~~pk~VLIiGGGD-Gg~~REvLkh~--~~v~mVeID~~Vv~~~k~~lP~~~~~~~DpRv~l~~~~~~~~~~~fDVIIvDs 147 (262)
T PRK00536 71 KELKEVLIVDGFD-LELAHQLFKYD--THVDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIICLQ 147 (262)
T ss_pred CCCCeEEEEcCCc-hHHHHHHHCcC--CeeEEEECCHHHHHHHHHHCHHHHHhhcCCCEEEeehhhhccCCcCCEEEEcC
Confidence 3458999998766 66777888886 389999999999999988422110011221122222344433347995 5676
Q ss_pred CCChHHHHHHHHHhhccC
Q 022865 272 IGNVSVMRAALECCHKVS 289 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~g 289 (291)
+-.+...+.+.++|+++|
T Consensus 148 ~~~~~fy~~~~~~L~~~G 165 (262)
T PRK00536 148 EPDIHKIDGLKRMLKEDG 165 (262)
T ss_pred CCChHHHHHHHHhcCCCc
Confidence 788888889999999994
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.031 Score=48.60 Aligned_cols=79 Identities=30% Similarity=0.400 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
++++++|+|+ +.+|...+..+...|+ +|+.+++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+.+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGA-RVAIVDIDADNGAAVAASLGERARFIATDITD-DAAIERAVATVVARFGRVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCeeEEEEecCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999999988888999 899998888765444 4444321 22 2222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.032 Score=48.21 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.+++++|+|+ |++|...++.+...|+ +|+.+.+ +++..+.+++.+...+ .|..+ ..+..+.+.+.. .+++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGA-KVAVLYNSAENEAKELREKGVFTIKCDVGN-RDQVKKSKEVVEKEFGRVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHhCCCeEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 9999999988888898 7766544 3444444443333222 22222 233444444332 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 999874
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.033 Score=48.07 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...+..+...|+ +|+.+++++++++.+. +.+.+. .+ |..+ ..+....+.+.. .+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGA-KVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRD-EAYAKALVALAVERFG 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 3578999987 9999999988888899 8999888887765442 233322 22 2222 223333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.034 Score=48.47 Aligned_cols=78 Identities=23% Similarity=0.283 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++++.. .+.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGA-NVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRD-YAAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999999988888999 899998887665333 2223221 22 3222 233444444432 23
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|.+.|
T Consensus 86 ~iD~vi~~ag 95 (264)
T PRK07576 86 PIDVLVSGAA 95 (264)
T ss_pred CCCEEEECCC
Confidence 7999999876
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.018 Score=50.95 Aligned_cols=43 Identities=14% Similarity=0.186 Sum_probs=37.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
..+++++|+|+|++|.+++..+...|+.+|++++++.++.+.+
T Consensus 121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l 163 (278)
T PRK00258 121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEEL 163 (278)
T ss_pred CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 3567899999999999999999999976999999998876544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.044 Score=48.12 Aligned_cols=79 Identities=19% Similarity=0.244 Sum_probs=50.1
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~~----~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++..+ +.+++|....+ |..+ ..+..+.+.+.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGA-ELAFTYQGEALGKRVKPLAESLGSDFVLPCDVED-IASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCC-EEEEecCchHHHHHHHHHHHhcCCceEEeCCCCC-HHHHHHHHHHHHHHh
Confidence 46889999984 899999988888999 8888877653222 22334543322 2222 233334444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 84 g~iD~lVnnAG~ 95 (271)
T PRK06505 84 GKLDFVVHAIGF 95 (271)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.16 E-value=0.045 Score=46.67 Aligned_cols=78 Identities=18% Similarity=0.175 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCCEE-eCCCCCCchHHHHHHhhcC--CCccEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTD--GGVDYSF 269 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~--gg~d~v~ 269 (291)
++++||.|+ +++|...++.+...|+ +|+.+++++++ .+..++.++..+ .|..+ ..+..+.+.+... +++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQ-PVIVSYRTHYPAIDGLRQAGAQCIQADFST-NAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHHcCCEEEEcCCCC-HHHHHHHHHHHHhhCCCccEEE
Confidence 468999987 9999999988888899 88888877643 333344453221 22222 2333344443322 3699999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 99874
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.031 Score=48.97 Aligned_cols=79 Identities=22% Similarity=0.330 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-E--eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~--i~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++++..+.+.++ +... . .|..+ ..++...+.+.. .++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGA-YVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISD-EQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHHHcCC
Confidence 4679999988 9999998888888899 899988884333333332 3221 2 22222 233333333332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 9999999874
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.048 Score=46.58 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
..++++|+|+ |.+|...+..+...|. +|+++++++++.+.+.+ .+... .+..+- +..++...+.+.. .++
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGW-DLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC 83 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4578999987 9999999988888899 89999998876544422 22221 222211 1233333333322 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
.|+++++.|.
T Consensus 84 id~lv~~ag~ 93 (241)
T PRK07454 84 PDVLINNAGM 93 (241)
T ss_pred CCEEEECCCc
Confidence 9999999884
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.046 Score=49.76 Aligned_cols=35 Identities=31% Similarity=0.350 Sum_probs=31.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 46799999999999999999999998999998864
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.04 Score=49.48 Aligned_cols=79 Identities=20% Similarity=0.162 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----C-CC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----G-VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----g-a~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.+++++|+|+ +++|...+..+...|+ +|+.+.+++++.+.+. ++ + .. ..+ |..+ ..+..+.+.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~-~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d-~~sv~~~~~~~~~~ 90 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGA-EVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSS-LASVAALGEQLRAE 90 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4678999988 9999998888888898 8988888877654332 21 1 11 122 3222 223333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+.+|++|++.|.
T Consensus 91 ~~~iD~li~nAG~ 103 (313)
T PRK05854 91 GRPIHLLINNAGV 103 (313)
T ss_pred CCCccEEEECCcc
Confidence 2379999999874
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.037 Score=47.40 Aligned_cols=79 Identities=24% Similarity=0.190 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++.+++|+|+ |.+|...+..+...|+ +|+++++++++++... +.+.. .++ |..+ ..++.+.+.+.. .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 83 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGA-TVAFNDGLAAEARELAAALEAAGGRAHAIAADLAD-PASVQRFFDAAAAALG 83 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999988 9999999988888999 8888888877654432 22322 122 3222 223333333221 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|.++|.
T Consensus 84 ~id~vi~~ag~ 94 (250)
T PRK12939 84 GLDGLVNNAGI 94 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999885
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.05 Score=47.28 Aligned_cols=80 Identities=18% Similarity=0.253 Sum_probs=49.3
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~----~~~~~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|++ ++|.+.++.+...|+ +|+.++++++.. ++.++++....+..+- +..+..+.+.+.. .+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGA-ELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC
Confidence 46899999873 899998888888899 888887775432 2223344323332221 1233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++++.|.
T Consensus 88 ~ld~lv~nAg~ 98 (258)
T PRK07533 88 RLDFLLHSIAF 98 (258)
T ss_pred CCCEEEEcCcc
Confidence 79999999874
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.039 Score=47.68 Aligned_cols=79 Identities=28% Similarity=0.372 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.|... .+ |..+ ..++.+.+.+.. .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 86 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGA-EVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTD-HDAVRAAIDAFEAEIG 86 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4689999987 9999999888888899 8999988877654332 223222 22 3222 233444444322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|++.|.
T Consensus 87 ~~d~li~~ag~ 97 (255)
T PRK07523 87 PIDILVNNAGM 97 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.034 Score=48.10 Aligned_cols=79 Identities=20% Similarity=0.357 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCCE-E--eCCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE-F--VNPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~--~~~~~~~ga~~-~--i~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++.. .+..++.+.+. . .|..+ ..++.+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGA-DIVGVGVAEAPETQAQVEALGRKFHFITADLIQ-QKDIDSIVSQAVEVMGHI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHcCCeEEEEEeCCCC-HHHHHHHHHHHHHHcCCC
Confidence 4689999987 9999999988888999 88887665421 22334444322 2 23322 233444444322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999874
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.054 Score=48.22 Aligned_cols=36 Identities=22% Similarity=0.339 Sum_probs=31.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
++++++|+|+|++|.+++..+...|+++|+.++++.
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567899999999999998888889997799998885
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.035 Score=47.65 Aligned_cols=80 Identities=21% Similarity=0.218 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCC-EEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--ga~-~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
++++++|+|+ |.+|...++.+...|+ +|+.+.++.++.+... ++ +.. ..+..+- +..+..+.+.+.. .+++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGA-RVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCC-eEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999988 9999998887777898 8999988876554332 22 221 2222221 2233333333322 1479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++.+.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.046 Score=48.12 Aligned_cols=79 Identities=23% Similarity=0.315 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+.++||+|+ |.+|...+..+...|+ +|+.++++.++++... ++ +... .+..+- +..++.+.+.... .+++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGM-KLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999987 9999999988888899 8999988876654332 22 3322 122221 1223333333321 2478
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 85 d~vi~~Ag~ 93 (287)
T PRK06194 85 HLLFNNAGV 93 (287)
T ss_pred CEEEECCCC
Confidence 999999885
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.043 Score=47.52 Aligned_cols=79 Identities=25% Similarity=0.387 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++++... +.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d-~~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGA-RVVLSARKAEELEEAAAHLEALGIDALWIAADVAD-EADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4688999987 9999998888888899 8999988887765443 222221 22 2222 233433333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|.+|.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.05 E-value=0.057 Score=45.90 Aligned_cols=74 Identities=19% Similarity=0.236 Sum_probs=49.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+++|+|+ |.+|...++.+...|+ +|+.+++++++++.+ ++++...+ .|..+ ..++.+.+.+.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGH-KVTLVGARRDDLEVAAKELDVDAIVCDNTD-PASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCcEEecCCCC-HHHHHHHHHHHh-hcCcEEEECCC
Confidence 4889987 9999999988888898 899998888876544 34444322 22222 223333333332 36899999876
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.039 Score=47.60 Aligned_cols=78 Identities=18% Similarity=0.235 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+... .+ |..+ .....+.+.+.. .++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGF-KVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSD-RDQVFAAVRQVVDTFGD 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 568899987 9999999988888899 8999988877654432 2 22221 22 2222 233333343332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 9999999874
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.039 Score=47.76 Aligned_cols=79 Identities=24% Similarity=0.300 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~-----ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||.|+ +++|...+..+...|+ +|+.+++++++++... ++ +... .+ |..+ ..++.+.+.+..
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGA-AVALADLDAALAERAAAAIARDVAGARVLAVPADVTD-AASVAAAVAAAEEA 83 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4678999987 9999999988888999 8999988877655432 22 2111 22 2222 233333343322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 84 ~g~id~li~~ag~ 96 (260)
T PRK07063 84 FGPLDVLVNNAGI 96 (260)
T ss_pred hCCCcEEEECCCc
Confidence 2479999999883
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.08 Score=44.99 Aligned_cols=100 Identities=20% Similarity=0.164 Sum_probs=69.6
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
........++||=+|.+ +|+.++.+|..+. -.+++.++.++++.+.+++ .|.+..+..... .+..+.+.+...
T Consensus 53 ~L~~~~~~k~iLEiGT~-~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~-gdal~~l~~~~~ 130 (219)
T COG4122 53 LLARLSGPKRILEIGTA-IGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLG-GDALDVLSRLLD 130 (219)
T ss_pred HHHHhcCCceEEEeecc-cCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEec-CcHHHHHHhccC
Confidence 34445577888888864 4888889999886 4489999999999888854 566553221110 244555665445
Q ss_pred CCccEEEEcCC---ChHHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIG---NVSVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g---~~~~~~~~~~~l~~~g 289 (291)
+.||+||==.. .+..++.+++.|++||
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GG 160 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGG 160 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCc
Confidence 68998874333 4778999999999994
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.026 Score=49.24 Aligned_cols=76 Identities=25% Similarity=0.378 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
+++++|+|+ |.+|...++.+...|+ +|++++++.++.+... +...+ .|.. +..++.+.+.+.. .+.+|++|+
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~-d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGY-RVFGTSRNPARAAPIP--GVELLELDVT-DDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCChhhccccC--CCeeEEeecC-CHHHHHHHHHHHHHhCCCCCEEEE
Confidence 467999987 9999998888888898 8999988876543221 22211 2222 2234444444432 247999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.043 Score=49.37 Aligned_cols=78 Identities=21% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---C-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---T-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga---~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |++|...++.+...|+ +|+.+++++++.+.+ .++.. . ..+ |..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 82 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGW-HVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGD-LDSVRRFVDDFRALGK 82 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhccCCceEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 4678999987 9999998888888898 899998888776543 23321 1 122 2222 223333333322 23
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|++.|
T Consensus 83 ~iD~li~nAg 92 (322)
T PRK07453 83 PLDALVCNAA 92 (322)
T ss_pred CccEEEECCc
Confidence 6999999987
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.043 Score=47.25 Aligned_cols=80 Identities=25% Similarity=0.347 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... .+..+- +..++.+.+.+.. .++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGA-KVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4679999988 9999998888888898 899998887764433 2333322 221111 1123333333221 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 85 id~li~~ag~ 94 (253)
T PRK06172 85 LDYAFNNAGI 94 (253)
T ss_pred CCEEEECCCC
Confidence 8999999874
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.047 Score=47.26 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=49.8
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE--Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~--~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++||.|++ ++|.+.++.+...|+ +|+.+.++++..+.++++.... .+ |..+ ..+..+.+.+.. .+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGA-TVIYTYQNDRMKKSLQKLVDEEDLLVECDVAS-DESIERAFATIKERVGK 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEecCchHHHHHHHhhccCceeEEeCCCCC-HHHHHHHHHHHHHHhCC
Confidence 46889999874 899998888888899 8888877754344444442211 22 2222 233434443332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 84 iD~lv~nAg~ 93 (252)
T PRK06079 84 IDGIVHAIAY 93 (252)
T ss_pred CCEEEEcccc
Confidence 9999999873
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.036 Score=41.33 Aligned_cols=87 Identities=22% Similarity=0.188 Sum_probs=56.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHHHhcC----C--CEEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRAKNFG----V--TEFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~~~~g----a--~~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
|+.+||-+|+|. |..++.+++. .++ +|+++|.+++-++++++.- . ...+... ++ .......+.||
T Consensus 1 p~~~vLDlGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~----d~--~~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGCGT-GRLSIALARLFPGA-RVVGVDISPEMLEIARERAAEEGLSDRITFVQG----DA--EFDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETTTT-SHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES----CC--HGGTTTSSCEE
T ss_pred CCCEEEEEcCcC-CHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC----cc--ccCcccCCCCC
Confidence 678999999876 8888888885 566 9999999999888886432 1 1112111 11 11111123799
Q ss_pred EEEEcC-CC---h------HHHHHHHHHhhcc
Q 022865 267 YSFECI-GN---V------SVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~-g~---~------~~~~~~~~~l~~~ 288 (291)
+|+... .. . ..++.+.+.|+++
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pg 104 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPG 104 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCC
Confidence 999876 21 1 2367788888887
|
... |
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.065 Score=46.40 Aligned_cols=77 Identities=23% Similarity=0.260 Sum_probs=51.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcC-CC-EE--eCCCCCCchHHHHHHhhc---CCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFG-VT-EF--VNPKDHDKPIQQVLVDLT---DGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~g-a~-~~--i~~~~~~~~~~~~v~~~~---~gg~d 266 (291)
+++||+|+ |.+|...++.+...|+ +|+.++++.++++.+. .+. .. .. .|..+ ..++.+.+.... .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGW-RVGAYDINEAGLAALAAELGAGNAWTGALDVTD-RAAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCC
Confidence 47899987 9999999988888898 8999988888766553 332 11 12 23322 233444444321 34799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+|+.+.|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999884
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.034 Score=47.53 Aligned_cols=80 Identities=26% Similarity=0.357 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE----EeCCCC-CCchH---HHHHHhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE----FVNPKD-HDKPI---QQVLVDL 260 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~----~i~~~~-~~~~~---~~~v~~~ 260 (291)
++++++|+|+ |.+|...++.+...|+ +|+.+++++++.+.+. +.+... ..|..+ +..++ .+.+.+.
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~ 83 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGA-TVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEA 83 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHH
Confidence 4578999987 9999998888888899 8999999887665442 122111 122211 11222 2333333
Q ss_pred cCCCccEEEEcCCC
Q 022865 261 TDGGVDYSFECIGN 274 (291)
Q Consensus 261 ~~gg~d~v~d~~g~ 274 (291)
..+.+|++|++.|.
T Consensus 84 ~~~~id~vi~~ag~ 97 (239)
T PRK08703 84 TQGKLDGIVHCAGY 97 (239)
T ss_pred hCCCCCEEEEeccc
Confidence 32478999999884
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.037 Score=47.93 Aligned_cols=78 Identities=26% Similarity=0.288 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCCE-E--eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTE-F--VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~---~ga~~-~--i~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++||.|+ |.+|...++.+...|+ +|+.+++++...++..+ .+.+. . .|..+ ..+..+.+.+.. .++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGA-RVVLVDRSELVHEVAAELRAAGGEALALTADLET-YAGAQAAMAAAVEAFGR 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999988 9999999988888899 89998887644333333 23322 1 23322 233333444332 247
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++++++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 999999987
|
|
| >PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.035 Score=55.14 Aligned_cols=76 Identities=25% Similarity=0.310 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCCEEeCCCCC-C
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~---------------------~~~~~~~~ga~~~i~~~~~-~ 250 (291)
..+++|+|+|+|+.|+.++..++.+|+ +|++++..+. ..+.++++|.+...+..-. +
T Consensus 325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~-~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~ 403 (654)
T PRK12769 325 KSDKRVAIIGAGPAGLACADVLARNGV-AVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIFSAMGIEFELNCEVGKD 403 (654)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHHHHCCeEEECCCEeCCc
Confidence 357899999999999999999999999 7888887543 3455667776543332110 1
Q ss_pred chHHHHHHhhcCCCccEEEEcCCC
Q 022865 251 KPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 251 ~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
..+ .++. ..+|.||.++|.
T Consensus 404 i~~----~~~~-~~~DavilAtGa 422 (654)
T PRK12769 404 ISL----ESLL-EDYDAVFVGVGT 422 (654)
T ss_pred CCH----HHHH-hcCCEEEEeCCC
Confidence 111 1111 269999999886
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.047 Score=47.09 Aligned_cols=79 Identities=20% Similarity=0.225 Sum_probs=51.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
++++||.|+ +++|...++.+...|+ +|+++++++++++.+.+ .+... .+..+- +..++.+.+.+.. .+++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGA-NVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999987 9999999998888999 89999888776544322 22221 222221 1233434343322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 80 d~lI~~ag~ 88 (252)
T PRK07677 80 DALINNAAG 88 (252)
T ss_pred cEEEECCCC
Confidence 999999873
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.05 Score=47.01 Aligned_cols=79 Identities=22% Similarity=0.328 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhcC--CCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLTD--GGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~~--gg~d 266 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.. ++++... .+ |..+ ..++.+.+.+... +.+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGW-QVVLADLDRERGSKVAKALGENAWFIAMDVAD-EAQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHcCCceEEEEccCCC-HHHHHHHHHHHHHHhCCCC
Confidence 4678999987 9999998888888898 898888776654433 3444322 22 2222 2233333333322 3699
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99999884
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.062 Score=45.70 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE---eCCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~---i~~~~~~~~~~~~v~~~~--~g 263 (291)
++.++||+|+ |.+|...++.+...|+ +|+++++++++.+.. ++.+.... .|..+ ...+.+.+.+.. -+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGA-KVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSD-EAAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 3468999998 9999999988888899 799998888765443 22333222 22222 233444444322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|.|+.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999864
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.049 Score=47.19 Aligned_cols=79 Identities=22% Similarity=0.310 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
++++++|+|+ |.+|...++.+...|+ +|+.++++++..+...++ +... .+ |..+ ..++.+.+.+.. .+.
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGA-NLILLDISPEIEKLADELCGRGHRCTAVVADVRD-PASVAAAIKRAKEKEGR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999988888899 899998887544443322 3221 22 2222 223333333322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 83 id~vi~~ag~ 92 (263)
T PRK08226 83 IDILVNNAGV 92 (263)
T ss_pred CCEEEECCCc
Confidence 9999999883
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.035 Score=47.89 Aligned_cols=75 Identities=24% Similarity=0.325 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |.+|...++.+...|+ +|+.+++++++ ...+.. ..+ |..+ ..++.+.+.... .+.+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~-~v~~~~r~~~~----~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGA-TVVVCGRRAPE----TVDGRPAEFHAADVRD-PDQVAALVDAIVERHGRLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCChhh----hhcCCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999987 9999999988888899 89998887764 112221 122 2222 233333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|.+.|.
T Consensus 79 vi~~ag~ 85 (252)
T PRK07856 79 LVNNAGG 85 (252)
T ss_pred EEECCCC
Confidence 9999873
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.05 Score=47.01 Aligned_cols=80 Identities=19% Similarity=0.236 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH----HHhcCCCEE---eCCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR----AKNFGVTEF---VNPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~----~~~~ga~~~---i~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...++.+...|+..|+++++++++.+. +++.+.... .|..+ ..++.+.+.... .+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSD-VEDCRRVVAAADEAFG 83 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 4678999988 9999999999989999449999888765542 233343321 23222 223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~id~li~~ag~ 94 (260)
T PRK06198 84 RLDALVNAAGL 94 (260)
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.065 Score=45.47 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=30.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+..+|..+++.+|.+
T Consensus 28 ~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 28 KAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4679999999999999999999999889999887
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.064 Score=45.81 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCC-CCCchHHHHHHhhc--CC-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPK-DHDKPIQQVLVDLT--DG- 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~-~~~~~~~~~v~~~~--~g- 263 (291)
++++++|.|+ +++|...+..+...|+ +|+.+++++++++.+. +.+.+. .+..+ .+.++..+.+.+.. -+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGA-TLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999988 8999998888888899 8999988888765432 334322 22111 12233333333322 13
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
.+|++|++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 7999999986
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.12 Score=45.52 Aligned_cols=35 Identities=31% Similarity=0.479 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|.|++|..++..+-..|..+++.+|.+
T Consensus 29 ~~s~VlVvG~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVGIGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999998899988865
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.046 Score=48.06 Aligned_cols=80 Identities=26% Similarity=0.273 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |++|...+..+...|+ +|+.+++++++++.+. + .+.+. .+..+- +..++.+.+.+.. .+.
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGA-RVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999988888999 8888888877655432 2 23322 122211 1233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 84 id~li~nAg~ 93 (275)
T PRK05876 84 VDVVFSNAGI 93 (275)
T ss_pred CCEEEECCCc
Confidence 9999999873
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.051 Score=48.49 Aligned_cols=79 Identities=19% Similarity=0.191 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc-----CCC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF-----GVT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~-----ga~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |++|...++.+...|+ +|+.+.++.++.+.+ +++ +.. ..+ |..+ ..+..+.+.+..
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~-~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~ 92 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGA-HVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTS-LASVRAAADALRAA 92 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCC-HHHHHHHHHHHHhh
Confidence 5689999988 9999998888888898 888888887765432 111 111 122 2222 233434444332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|+++|.
T Consensus 93 ~~~iD~li~nAg~ 105 (306)
T PRK06197 93 YPRIDLLINNAGV 105 (306)
T ss_pred CCCCCEEEECCcc
Confidence 2379999999873
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.05 Score=46.32 Aligned_cols=76 Identities=21% Similarity=0.234 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCC-CCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKD-HDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~-~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.+++++|+|+ |.+|...++.+...|+.+|+.++++.++.+. .+.. ..+..+- +..++.+.+... +.+|+||.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 4578999987 9999999998888898678888888776543 2222 1221111 122333333322 36899999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 9876
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.052 Score=47.48 Aligned_cols=77 Identities=21% Similarity=0.256 Sum_probs=50.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCE-E--eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-F--VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~-~--i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
+++||+|+ |.+|...++.+...|+ +|+++.+++++++.+++ ++... + .|..+ ...+.+.+.+.. .+++|+|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGD-RVAATVRRPDALDDLKARYGDRLWVLQLDVTD-SAAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 57999987 9999998888888898 89999898877665543 23221 1 22222 223333343322 2378999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999874
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.052 Score=47.06 Aligned_cols=78 Identities=18% Similarity=0.258 Sum_probs=49.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
.++||+|+ |.+|...++.+...|+ +|+++++++++.+.+. ..+... ++..+- +...+.+.+.+.. -+++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGA-QLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899988 9999999988888898 8999988876644332 223322 121111 1233334444332 13699
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+||.+.|.
T Consensus 81 ~vi~~ag~ 88 (263)
T PRK06181 81 ILVNNAGI 88 (263)
T ss_pred EEEECCCc
Confidence 99999874
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.046 Score=47.97 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--C-EE--eCCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EF--VNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga--~-~~--i~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++||.|+ |.+|...++.+...|+ +|+.+++++++.+.+ .+++. . .. .|..+ ..++.+.+.+.. .++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~g~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGA-KVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTV-EDDVSRAVDFTVDKFGT 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 3678999987 9999998888878898 899988876654333 33321 1 12 22222 223333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 9999999874
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.076 Score=50.18 Aligned_cols=78 Identities=24% Similarity=0.394 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhH-HHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKF-DRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~-~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++.+ +++ ++..+++...+ .|..+ ..+..+.+.... .+++|
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga-~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 286 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGA-HVVCLDVPAAGEALAAVANRVGGTALALDITA-PDAPARIAEHLAERHGGLD 286 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEeCCC-HHHHHHHHHHHHHhCCCCC
Confidence 5789999988 9999999999888999 888887643 222 33344554322 23322 223333333322 23799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 287 ~vi~~AG 293 (450)
T PRK08261 287 IVVHNAG 293 (450)
T ss_pred EEEECCC
Confidence 9999988
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.052 Score=46.70 Aligned_cols=79 Identities=20% Similarity=0.233 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCC-EEe--CCCCCCchHHHHHHhhcC--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVT-EFV--NPKDHDKPIQQVLVDLTD--G 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~-~~i--~~~~~~~~~~~~v~~~~~--g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+.++++.++++.+. + .+.. ..+ +..+ ..+..+.+.+... +
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 84 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGA-HVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGE-MEQIDALFAHIRERHG 84 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3578999987 9999999998888998 8999988877654432 2 2321 122 2222 2233333333221 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++++.|.
T Consensus 85 ~id~li~~ag~ 95 (252)
T PRK07035 85 RLDILVNNAAA 95 (252)
T ss_pred CCCEEEECCCc
Confidence 69999998873
|
|
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.07 Score=45.73 Aligned_cols=70 Identities=21% Similarity=0.274 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCC----hhh--------HHHHHhcCCCEEeCCCCCCchHHHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDID----PKK--------FDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~--~v~~~~~~----~~~--------~~~~~~~ga~~~i~~~~~~~~~~~~v~ 258 (291)
-++.+++|+|+|..|..++..+...|++ +|+.++++ +++ .++++.++... . ..++.+.+.
T Consensus 23 l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~-----~~~l~~~l~ 96 (226)
T cd05311 23 IEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-T-----GGTLKEALK 96 (226)
T ss_pred ccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-c-----cCCHHHHHh
Confidence 3567999999999999999888889998 89999998 443 33445443211 0 012223331
Q ss_pred hhcCCCccEEEEcCC
Q 022865 259 DLTDGGVDYSFECIG 273 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g 273 (291)
++|++|++++
T Consensus 97 -----~~dvlIgaT~ 106 (226)
T cd05311 97 -----GADVFIGVSR 106 (226)
T ss_pred -----cCCEEEeCCC
Confidence 4899999987
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.061 Score=49.96 Aligned_cols=73 Identities=19% Similarity=0.240 Sum_probs=54.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+.++||+|+|-+|..++..+...|..+|+...++.+|. ++++++|+. ++... +..+.+. .+|+||.++
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~-~~~l~----el~~~l~-----~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAE-AVALE----ELLEALA-----EADVVISST 246 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCe-eecHH----HHHHhhh-----hCCEEEEec
Confidence 678999999999999999999999988999998888875 466789853 32221 1222222 489999999
Q ss_pred CChH
Q 022865 273 GNVS 276 (291)
Q Consensus 273 g~~~ 276 (291)
|.+.
T Consensus 247 sa~~ 250 (414)
T COG0373 247 SAPH 250 (414)
T ss_pred CCCc
Confidence 9753
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.076 Score=46.05 Aligned_cols=81 Identities=23% Similarity=0.307 Sum_probs=50.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhh-HHH----HHhcCC-C-EEe--CCCCCCchHHHHHHhh
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKK-FDR----AKNFGV-T-EFV--NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~-~~~----~~~~ga-~-~~i--~~~~~~~~~~~~v~~~ 260 (291)
+..++++||+|+ |++|...++-+...| + +|+.+++++++ ++. +++.+. + +++ |..+ ..+..+.+.+.
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~-~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~-~~~~~~~~~~~ 82 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPA-RVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALD-TDSHPKVIDAA 82 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCC-eEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCC-hHHHHHHHHHH
Confidence 456789999988 999999887666664 7 89898887765 332 223332 1 222 2222 23333334433
Q ss_pred cC-CCccEEEEcCCC
Q 022865 261 TD-GGVDYSFECIGN 274 (291)
Q Consensus 261 ~~-gg~d~v~d~~g~ 274 (291)
.. +++|+++++.|.
T Consensus 83 ~~~g~id~li~~ag~ 97 (253)
T PRK07904 83 FAGGDVDVAIVAFGL 97 (253)
T ss_pred HhcCCCCEEEEeeec
Confidence 22 479999988775
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.18 Score=37.93 Aligned_cols=84 Identities=21% Similarity=0.241 Sum_probs=58.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
|+|+|.|.+|...++.++..+. +|++++.++++.+.+++.|.. ++.-+.. -.+.+++..-..++.++-+++++..
T Consensus 1 vvI~G~g~~~~~i~~~L~~~~~-~vvvid~d~~~~~~~~~~~~~-~i~gd~~---~~~~l~~a~i~~a~~vv~~~~~d~~ 75 (116)
T PF02254_consen 1 VVIIGYGRIGREIAEQLKEGGI-DVVVIDRDPERVEELREEGVE-VIYGDAT---DPEVLERAGIEKADAVVILTDDDEE 75 (116)
T ss_dssp EEEES-SHHHHHHHHHHHHTTS-EEEEEESSHHHHHHHHHTTSE-EEES-TT---SHHHHHHTTGGCESEEEEESSSHHH
T ss_pred eEEEcCCHHHHHHHHHHHhCCC-EEEEEECCcHHHHHHHhcccc-cccccch---hhhHHhhcCccccCEEEEccCCHHH
Confidence 5788999999999999999665 899999999999999988853 4433321 2234444432379999999888664
Q ss_pred HHHHHHHhh
Q 022865 278 MRAALECCH 286 (291)
Q Consensus 278 ~~~~~~~l~ 286 (291)
-..+...++
T Consensus 76 n~~~~~~~r 84 (116)
T PF02254_consen 76 NLLIALLAR 84 (116)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444444444
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.098 Score=45.26 Aligned_cols=78 Identities=21% Similarity=0.285 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEeCCCC-CCchHHHHHHhhcCCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFVNPKD-HDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i~~~~-~~~~~~~~v~~~~~gg~ 265 (291)
+++++||.|+ +++|...++.+...|+ +|+.+++++++.+.+. ++ +.. ..+..+- +..++.+.+... +.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGC-HLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCC
Confidence 4689999988 9999999988888999 8999988887665432 12 222 1222211 122333333322 479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.061 Score=46.45 Aligned_cols=78 Identities=28% Similarity=0.365 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC--EEe--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT--EFV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~--~~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. .+... +.+ |..+ ..++...+.+.. .+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGD-RVLALDIDAAALAAFADALGDARFVPVACDLTD-AASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 468999988 9999998888778898 8999988887765443 33211 122 2222 123333333322 13699
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (257)
T PRK07074 80 VLVANAGA 87 (257)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.067 Score=47.61 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=30.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
++++++|+|+|+.+.+++..+..+|+++|+++.+++
T Consensus 123 ~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~ 158 (288)
T PRK12749 123 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRD 158 (288)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 567999999999999877777778998999999985
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.052 Score=47.81 Aligned_cols=79 Identities=20% Similarity=0.276 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC---E---EeCCCCCCc---hHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---E---FVNPKDHDK---PIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~---~---~i~~~~~~~---~~~~~v~~ 259 (291)
.++++||.|+ .++|.+.+..+...|+ +|+.+++++++++...+ .+.. . ..|... ++ +..+...+
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga-~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGA-KVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSK-EVDVEKLVEFAVE 84 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCC-HHHHHHHHHHHHH
Confidence 5788999987 9999999999999999 89999999887655532 2221 1 222222 12 22223333
Q ss_pred hcCCCccEEEEcCCC
Q 022865 260 LTDGGVDYSFECIGN 274 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~ 274 (291)
...|++|++++..|.
T Consensus 85 ~~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGA 99 (270)
T ss_pred HhCCCCCEEEEcCCc
Confidence 334589999998885
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.069 Score=48.68 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+..+|..+++.+|.+
T Consensus 24 ~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D 57 (339)
T PRK07688 24 EKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRD 57 (339)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 3679999999999999999999999999999886
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.06 Score=46.66 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=49.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCEEeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTEFVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
++||+|+ +++|...++.+...|+ +|+.+++++++++.+. + .+....+..+- +..++.+.+.+.. .+++|++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGA-RVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 6899987 9999998888888899 8999988887654432 2 22222222221 1233444444322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 81 i~naG~ 86 (259)
T PRK08340 81 VWNAGN 86 (259)
T ss_pred EECCCC
Confidence 999884
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.079 Score=44.51 Aligned_cols=46 Identities=43% Similarity=0.609 Sum_probs=39.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga 240 (291)
+|.+++|+|.|.+|..+++.+...|+ +|++++.++++++.+. .+++
T Consensus 27 ~gk~v~I~G~G~vG~~~A~~L~~~G~-~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 27 EGKTVAVQGLGKVGYKLAEHLLEEGA-KLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCC
Confidence 57899999999999999999999999 8999999988776654 4454
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.013 Score=49.57 Aligned_cols=97 Identities=21% Similarity=0.271 Sum_probs=62.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....+++|++||-+|+|. |+.++.+++..|.. +|+.++..++-.+.++ +++.+.+.....+ .. ..+ .
T Consensus 64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gd-g~--~g~--~ 137 (209)
T PF01135_consen 64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGD-GS--EGW--P 137 (209)
T ss_dssp HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES--GG--GTT--G
T ss_pred HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcc-hh--hcc--c
Confidence 45667799999999999876 89999999988743 6999999987666554 3455432111111 00 001 1
Q ss_pred cCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 261 TDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+.||.|+-+.+.+..-...++.|+++
T Consensus 138 ~~apfD~I~v~~a~~~ip~~l~~qL~~g 165 (209)
T PF01135_consen 138 EEAPFDRIIVTAAVPEIPEALLEQLKPG 165 (209)
T ss_dssp GG-SEEEEEESSBBSS--HHHHHTEEEE
T ss_pred cCCCcCEEEEeeccchHHHHHHHhcCCC
Confidence 1237999999888777677888889988
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.058 Score=46.43 Aligned_cols=78 Identities=22% Similarity=0.422 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCCE--E--eCCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE--F--VNPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~----ga~~--~--i~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...+..+...|+ +|+.+.+++++++.+ .++ +... . .|..+ ..++.+.+.+..
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGG-IVIAADIDKEALNELLESLGKEFKSKKLSLVELDITD-QESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCC-HHHHHHHHHHHHHH
Confidence 4688999988 9999999988888899 888888887765433 222 2221 1 13322 234444444432
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+++|+++++.+
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 246999999985
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.062 Score=46.43 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~-----ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...+..+...|+ +|+.+++++++++... ++ +.+. .+ |..+ ..++.+.+.+..
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGA-DVLIVARDADALAQARDELAEEFPEREVHGLAADVSD-DEDRRAILDWVEDH 85 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCC-HHHHHHHHHHHHHH
Confidence 4689999987 9999999988888999 8999888887654432 22 2221 11 2222 233333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
-+++|+++.+.|.
T Consensus 86 ~g~id~li~~ag~ 98 (257)
T PRK09242 86 WDGLHILVNNAGG 98 (257)
T ss_pred cCCCCEEEECCCC
Confidence 2479999999984
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.063 Score=46.38 Aligned_cols=79 Identities=29% Similarity=0.395 Sum_probs=51.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
++++||+|+ |.+|...++.+...|+ +|+.++++.++.+.+. +++... .+..+- +..+....+.+.. .+.+|++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGA-RVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578999987 9999999988888899 8999988888765543 333211 222111 1233333333322 2379999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 998873
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.059 Score=46.51 Aligned_cols=80 Identities=20% Similarity=0.195 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCCC-CchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKDH-DKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~~-~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+ ++.+.+. .+..+-. ...+.+.+.+.. .++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGA-AVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999988 9999999988888999 888888888654333 3344432 2222211 223333333221 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (262)
T PRK13394 85 VDILVSNAGI 94 (262)
T ss_pred CCEEEECCcc
Confidence 8999999874
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.059 Score=47.18 Aligned_cols=78 Identities=24% Similarity=0.313 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++ .+... .+ |..+ ..++...+.+.. .+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGA-KVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLD-KESLEQARQQILEDFG 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999988888999 899998887655333 22 23221 22 2221 223333333322 24
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|+++|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 7999999988
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.077 Score=47.06 Aligned_cols=79 Identities=24% Similarity=0.310 Sum_probs=56.1
Q ss_pred CCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhhHHHHH-----hcCCCE---EeCCCCCCchHHHHHHhhcC
Q 022865 193 EPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVTE---FVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~-ai~~a~~~g~~~v~~~~~~~~~~~~~~-----~~ga~~---~i~~~~~~~~~~~~v~~~~~ 262 (291)
+-|++.+|.|+ .++|.+ |-++|+ .|. +|+.+.++++|++..+ +.++.- ++|....+. .-+.+++...
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~-nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~-~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGF-NVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE-VYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch-hHHHHHHHhc
Confidence 34689999998 899977 446665 999 8999999999987663 344311 355555333 3455666555
Q ss_pred C-CccEEEEcCCC
Q 022865 263 G-GVDYSFECIGN 274 (291)
Q Consensus 263 g-g~d~v~d~~g~ 274 (291)
+ .+-+.+|++|.
T Consensus 124 ~~~VgILVNNvG~ 136 (312)
T KOG1014|consen 124 GLDVGILVNNVGM 136 (312)
T ss_pred CCceEEEEecccc
Confidence 5 78899999995
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.062 Score=46.41 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=49.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hH-HHH---HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KF-DRA---KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~-~~~---~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++++ .+ ++. ++.+... .+..+- +..++.+.+.+.. .+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGA-DVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888999 8888877643 22 222 2233222 222111 2233444444322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|++.|.
T Consensus 86 ~id~li~~ag~ 96 (254)
T PRK06114 86 ALTLAVNAAGI 96 (254)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.08 Score=45.51 Aligned_cols=35 Identities=40% Similarity=0.512 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|.|++|..++..+-..|..+++.+|.+.
T Consensus 11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 35799999999999999999999999999988654
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.066 Score=46.09 Aligned_cols=76 Identities=20% Similarity=0.296 Sum_probs=50.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCE-Ee--CCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++|+|+ |.+|...+..+...|+ +|+++++++++++.+.+ ++... .+ |..+ ..++.+.+.+.. .+++|.++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~~~id~vi 79 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRN-RAAIEEMLASLPAEWRNIDVLV 79 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhccceEEEEecCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 6889987 9999999988888899 89999998887665533 34322 22 2222 233334444322 23799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+.|.
T Consensus 80 ~~ag~ 84 (248)
T PRK10538 80 NNAGL 84 (248)
T ss_pred ECCCc
Confidence 98874
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.036 Score=48.18 Aligned_cols=74 Identities=22% Similarity=0.289 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-EeCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-~i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++++||+|+ +++|...+..+...|+ +|+.+++++++.. .... ..|..+ ..++.+.+.+.. .+.+|++|
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~-~Vi~~~r~~~~~~-----~~~~~~~D~~~-~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGS-NVINFDIKEPSYN-----DVDYFKVDVSN-KEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCccccC-----ceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4679999988 9999999998888999 8998887765422 1111 123322 233444444332 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 78 ~~Ag~ 82 (258)
T PRK06398 78 NNAGI 82 (258)
T ss_pred ECCCC
Confidence 98873
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.046 Score=46.06 Aligned_cols=96 Identities=17% Similarity=0.150 Sum_probs=63.4
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCC---EEeCCCCCCchHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVL 257 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~---~~i~~~~~~~~~~~~v 257 (291)
+.....++++++||=+|+|. |..++.+++..+ ..+|++++.+++-.+.+++ .+.. .++..+. .+.+
T Consensus 64 ~~~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~-----~~~~ 137 (205)
T PRK13944 64 MCELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDG-----KRGL 137 (205)
T ss_pred HHHhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCc-----ccCC
Confidence 34556678899999998866 888888888774 3389999999987766643 3432 1222111 0111
Q ss_pred HhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
. ..+.||.|+-+..........++.|+++|
T Consensus 138 ~--~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG 167 (205)
T PRK13944 138 E--KHAPFDAIIVTAAASTIPSALVRQLKDGG 167 (205)
T ss_pred c--cCCCccEEEEccCcchhhHHHHHhcCcCc
Confidence 1 12379998877666666777888999983
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.072 Score=46.10 Aligned_cols=35 Identities=34% Similarity=0.484 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+..+|..+++.+|.+.
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ 58 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDT 58 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence 36899999999999999999999999998877654
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.065 Score=47.64 Aligned_cols=121 Identities=25% Similarity=0.282 Sum_probs=66.7
Q ss_pred ccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 157 DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 157 ~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
....+++.+++-+- ......|.+-.-.....++++.++|=+|+|. |.++|..+ .+|+.+|+++|.++-..+.++
T Consensus 129 ~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~~~~~g~~vlDvGcGS-GILaIAa~-kLGA~~v~g~DiDp~AV~aa~ 202 (300)
T COG2264 129 DELNIELDPGLAFG----TGTHPTTSLCLEALEKLLKKGKTVLDVGCGS-GILAIAAA-KLGAKKVVGVDIDPQAVEAAR 202 (300)
T ss_pred CceEEEEccccccC----CCCChhHHHHHHHHHHhhcCCCEEEEecCCh-hHHHHHHH-HcCCceEEEecCCHHHHHHHH
Confidence 46667777666332 2223333332111223356888888888865 77777655 568879999999997766665
Q ss_pred h----cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 237 N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 237 ~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
+ .+....+... .........++.||+|+-.+=. ..........++++
T Consensus 203 eNa~~N~v~~~~~~~-----~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpg 256 (300)
T COG2264 203 ENARLNGVELLVQAK-----GFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPG 256 (300)
T ss_pred HHHHHcCCchhhhcc-----cccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCC
Confidence 4 2333211011 0011122223589988865432 23345555666776
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.078 Score=45.73 Aligned_cols=79 Identities=20% Similarity=0.319 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +.+|...++.+...|+ +|+.+++++++++.+ .+ .+... .+ |..+ ..++.+.+.+.. .+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~-~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGA-EIIINDITAERAELAVAKLRQEGIKAHAAPFNVTH-KQEVEAAIEHIEKDIG 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999987 9999999888888898 899998887765433 22 23221 22 2222 233333343322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 79999999874
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.07 Score=46.72 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCC--C-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV--T-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga--~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
++++||+|+ |.+|...+..+...|+ +|+++++++++.+...+ .+. . ..+ |..+ ..++.+ +.+.. .
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~-~~~~~~~~ 79 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGY-LVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTD-QNSIHN-FQLVLKEI 79 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCC-HHHHHH-HHHHHHhc
Confidence 568999988 9999999988888899 89998888776544422 221 1 122 2222 233333 43322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999999874
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.1 Score=43.33 Aligned_cols=76 Identities=26% Similarity=0.302 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCCEE-eCCCCCCchHHHHHHhhcCCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTEF-VNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~~~-i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
++.+++|+|+ |.+|..++..+...|+ +|+.+.++.++.+.+. .+ +.... .+..+ ..+..+.+ .++|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~-~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~-----~~~d 99 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGA-RVVLVGRDLERAQKAADSLRARFGEGVGAVETSD-DAARAAAI-----KGAD 99 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC-HHHHHHHH-----hcCC
Confidence 5678999987 9999988888878887 8999888887765443 22 22211 11111 11222222 2589
Q ss_pred EEEEcCCChH
Q 022865 267 YSFECIGNVS 276 (291)
Q Consensus 267 ~v~d~~g~~~ 276 (291)
+||.+++...
T Consensus 100 iVi~at~~g~ 109 (194)
T cd01078 100 VVFAAGAAGV 109 (194)
T ss_pred EEEECCCCCc
Confidence 9999887544
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.052 Score=46.04 Aligned_cols=73 Identities=25% Similarity=0.303 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhcCC-CccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLTDG-GVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~~g-g~d~v~ 269 (291)
++++++|+|+ |.+|...++.+...|+ +|+.++++.++ .+.. +++ |..+ ..++.+.+.+.... ++|++|
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~-~v~~~~r~~~~-----~~~~-~~~~~D~~~-~~~~~~~~~~~~~~~~~d~vi 73 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGH-QVIGIARSAID-----DFPG-ELFACDLAD-IEQTAATLAQINEIHPVDAIV 73 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCccc-----ccCc-eEEEeeCCC-HHHHHHHHHHHHHhCCCcEEE
Confidence 3578999988 9999999988888898 89998887654 1211 222 2222 23344444443332 689999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+.|.
T Consensus 74 ~~ag~ 78 (234)
T PRK07577 74 NNVGI 78 (234)
T ss_pred ECCCC
Confidence 99874
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.086 Score=43.03 Aligned_cols=80 Identities=26% Similarity=0.250 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-H---hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-K---NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~---~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
++++++|.|+ +++|...+..+...|+ +|+.++++++..+.+ + +.+... .+..+- +..++.+.+.+.. -++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGA-KVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 5678999987 8899998888878898 899988877654332 2 234322 222221 1123333333221 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 94 iDilVnnAG~ 103 (169)
T PRK06720 94 IDMLFQNAGL 103 (169)
T ss_pred CCEEEECCCc
Confidence 9999999884
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.072 Score=46.57 Aligned_cols=79 Identities=24% Similarity=0.366 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc---C--CC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF---G--VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~---g--a~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.. .++ + .. .++ |..+ ..+....+.+..
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGA-AVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTD-EDQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4678999998 9999999999988999 899998887664433 222 1 11 122 2222 233333344332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|.+.|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 2378999999873
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=95.69 E-value=0.034 Score=44.56 Aligned_cols=79 Identities=20% Similarity=0.228 Sum_probs=48.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--PKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~--~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ +++|...++.+-..|..+|+.+.++ .++.+.+ +..+... ++..+- +..++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 47899987 9999998877777777688888888 3433322 3334322 222221 1234444444433 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999885
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.08 Score=42.07 Aligned_cols=74 Identities=19% Similarity=0.212 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~-~~~~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.++.+++|+|.|.+|...++.+...|..+|++++++.++.+. +++++... ..... +..+. -.++|+|+.
T Consensus 17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL----DLEEL-----LAEADLIIN 87 (155)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec----chhhc-----cccCCEEEe
Confidence 456789999999999999988888875489999998877654 44555421 01111 11111 136888888
Q ss_pred cCCCh
Q 022865 271 CIGNV 275 (291)
Q Consensus 271 ~~g~~ 275 (291)
|++..
T Consensus 88 ~~~~~ 92 (155)
T cd01065 88 TTPVG 92 (155)
T ss_pred CcCCC
Confidence 87764
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.075 Score=45.54 Aligned_cols=77 Identities=17% Similarity=0.306 Sum_probs=49.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c-----CCC-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F-----GVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~-----ga~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++|+|+ |.+|...++.+...|+ +|+.+++++++++.+.+ + +.. .++ |..+ ..++.+.+.+.. .
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGR-DLALCARRTDRLEELKAELLARYPGIKVAVAALDVND-HDQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 468999987 9999988877777898 88888888876654422 1 211 122 3222 234444444332 2
Q ss_pred CCccEEEEcCC
Q 022865 263 GGVDYSFECIG 273 (291)
Q Consensus 263 gg~d~v~d~~g 273 (291)
+++|++|.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 37999999987
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=95.68 E-value=0.078 Score=46.04 Aligned_cols=35 Identities=34% Similarity=0.474 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..++..+.+.|..+++.+|.+.
T Consensus 32 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D~ 66 (245)
T PRK05690 32 AARVLVVGLGGLGCAASQYLAAAGVGTLTLVDFDT 66 (245)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 46899999999999999999999998998886553
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.075 Score=45.91 Aligned_cols=80 Identities=21% Similarity=0.288 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |++|.+.++.+...|+ +|+.++..+. ..+.+++.+... .+..+- +..+..+.+.+.. .+++|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGC-DIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4679999988 9999999998888899 8888765442 222333333221 121211 1233334443322 23799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999884
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.078 Score=43.25 Aligned_cols=53 Identities=21% Similarity=0.154 Sum_probs=37.5
Q ss_pred CCCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCC
Q 022865 192 VEPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPK 247 (291)
Q Consensus 192 ~~~g~~vlI~G~g~-vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~ 247 (291)
--.+++|+|+|+|. +|..++..++..|+ +|+.+.++.+.+. .+.+ +|.+|...
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~-~V~v~~r~~~~l~~~l~~--aDiVIsat 95 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNA-TVTVCHSKTKNLKEHTKQ--ADIVIVAV 95 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCC-EEEEEECCchhHHHHHhh--CCEEEEcC
Confidence 35789999999987 59989999999999 7888877654332 2222 45555443
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.08 Score=45.15 Aligned_cols=80 Identities=20% Similarity=0.171 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
++.++||+|+ |.+|...+..+...|+ +|+..+++.++++.. ..++... .+..+- +..++.+.+.+.. .+++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGA-IVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4578999987 9999998888888898 888887777766544 3343322 222111 1223333333322 237999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|.+.|.
T Consensus 84 vi~~ag~ 90 (245)
T PRK12936 84 LVNNAGI 90 (245)
T ss_pred EEECCCC
Confidence 9999884
|
|
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.032 Score=46.36 Aligned_cols=91 Identities=15% Similarity=0.074 Sum_probs=57.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcCCCccE
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
++++.+||-+|+|. |..++.+++.....+|+++|.+++..+.+++ .+.+.+.... .+..+ +. . .+.||+
T Consensus 43 l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~---~d~~~-~~-~-~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVH---GRAEE-FG-Q-EEKFDV 115 (187)
T ss_pred cCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEe---ccHhh-CC-C-CCCccE
Confidence 44588999998865 6677777766544499999999987766653 4443211111 11111 11 1 347998
Q ss_pred EEEcCC--ChHHHHHHHHHhhccC
Q 022865 268 SFECIG--NVSVMRAALECCHKVS 289 (291)
Q Consensus 268 v~d~~g--~~~~~~~~~~~l~~~g 289 (291)
|+-... -+..++.+.+.|+++|
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG 139 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGG 139 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCe
Confidence 886432 2466778889999983
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.062 Score=46.22 Aligned_cols=80 Identities=24% Similarity=0.261 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+.+. + .+... .+..+- +..++.+.+.+.. .++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGA-KVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999987 9999998888888898 8999988887654432 2 23221 222221 2233333333322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.++|.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999998873
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.068 Score=46.21 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=49.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCC--EEeCCCC-CCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT--EFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~--~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...+..+...|+ +|+.++++.++.+... + .+.. ..+..+- +..+....+.+.. .+
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGY-RVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999988 9999998888888898 8999988876553332 1 2211 1222221 1233333343332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 81 ~id~vv~~ag~ 91 (259)
T PRK12384 81 RVDLLVYNAGI 91 (259)
T ss_pred CCCEEEECCCc
Confidence 79999999873
|
|
| >PRK14967 putative methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.12 Score=44.01 Aligned_cols=47 Identities=28% Similarity=0.394 Sum_probs=37.5
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
...++++++||-+|+|. |..++.+++. +..+|+++|.+++.++.+++
T Consensus 31 ~~~~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~ 77 (223)
T PRK14967 31 AEGLGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARL 77 (223)
T ss_pred hcccCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHH
Confidence 34567889999999987 8888888875 55589999999988876654
|
|
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.087 Score=45.09 Aligned_cols=90 Identities=23% Similarity=0.247 Sum_probs=60.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE--eCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~--i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
-+|.+||=+|+|+ |+++.-+| .+|+ +|+++|.+++-.+.++......- ++|.. ...+.+.+. ++.||+|+.
T Consensus 58 l~g~~vLDvGCGg-G~Lse~mA-r~Ga-~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~---~~~edl~~~-~~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG-GILSEPLA-RLGA-SVTGIDASEKPIEVAKLHALESGVNIDYRQ---ATVEDLASA-GGQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc-cHhhHHHH-HCCC-eeEEecCChHHHHHHHHhhhhccccccchh---hhHHHHHhc-CCCccEEEE
Confidence 4778888888865 67776666 5677 99999999999999875433222 33432 223333332 148999876
Q ss_pred -----cCCChH-HHHHHHHHhhccC
Q 022865 271 -----CIGNVS-VMRAALECCHKVS 289 (291)
Q Consensus 271 -----~~g~~~-~~~~~~~~l~~~g 289 (291)
.+.++. .+..+.++++|+|
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G 155 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGG 155 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCc
Confidence 556554 5677788888883
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.12 Score=44.38 Aligned_cols=35 Identities=34% Similarity=0.356 Sum_probs=30.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.+.
T Consensus 21 ~~~VlivG~GglGs~va~~La~~Gvg~i~lvD~D~ 55 (228)
T cd00757 21 NARVLVVGAGGLGSPAAEYLAAAGVGKLGLVDDDV 55 (228)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 46899999999999999999999999998885543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.071 Score=45.60 Aligned_cols=80 Identities=21% Similarity=0.223 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhcC--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg 264 (291)
.++++||+|+ |.+|...+..+...|+ +|++++++.++.... ++.+... .+..+- +..++.+.+.+... +.
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGA-EVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999987 9999998888888898 899998886554322 2223221 222111 12333333333221 36
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.+.|.
T Consensus 84 ~d~vi~~ag~ 93 (251)
T PRK12826 84 LDILVANAGI 93 (251)
T ss_pred CCEEEECCCC
Confidence 8999999864
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.13 Score=40.51 Aligned_cols=32 Identities=31% Similarity=0.505 Sum_probs=28.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+|+|+|+|++|...+..+...|.++++.+|.+
T Consensus 1 ~VliiG~GglGs~ia~~L~~~Gv~~i~ivD~d 32 (143)
T cd01483 1 RVLLVGLGGLGSEIALNLARSGVGKITLIDFD 32 (143)
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 48899999999999999999999889998766
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.074 Score=47.78 Aligned_cols=71 Identities=20% Similarity=0.196 Sum_probs=48.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|+|+|+ |-+|...+..+...|+ +|++++++.++.......+.+.+. |..+ ..+ +.+... ++|+||++++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~-~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d-~~~----l~~al~-g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGY-QVRCLVRNLRKASFLKEWGAELVYGDLSL-PET----LPPSFK-GVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcChHHhhhHhhcCCEEEECCCCC-HHH----HHHHHC-CCCEEEECCCC
Confidence 6899998 9999999988888898 899988887766555555553322 2221 122 333222 58999998763
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.073 Score=49.25 Aligned_cols=35 Identities=29% Similarity=0.259 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 45689999999999999999999999999999887
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.61 E-value=0.08 Score=45.35 Aligned_cols=79 Identities=18% Similarity=0.188 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...+..+...|+ +|+.++++.++.+.+. +.+... .+..+- +..++.+.+.... .++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGA-KVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999999988888898 8999888877654432 222222 222221 1223333333322 237
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++|.+.|
T Consensus 81 ~d~vi~~ag 89 (250)
T TIGR03206 81 VDVLVNNAG 89 (250)
T ss_pred CCEEEECCC
Confidence 899999987
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.088 Score=45.40 Aligned_cols=79 Identities=19% Similarity=0.357 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ +.+|...+..+...|+ +|+.+++++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGA-HVLVNGRNAATLEAAVAALRAAGGAAEALAFDIAD-EEAVAAAFARIDAEHG 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 5789999988 9999998888778899 899998887664432 2233222 22 2222 233333443332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|.+|.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 78999999884
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.065 Score=51.53 Aligned_cols=80 Identities=26% Similarity=0.349 Sum_probs=54.5
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
..++++||+|+ +++|+..++.+...|+ +|+.+++++++++.+. +++... .+ |..+ ..+..+.+.+.. .+.+
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i 344 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGD-RLLIIDRDAEGAKKLAEALGDEHLSVQADITD-EAAVESAFAQIQARWGRL 344 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEccCCC-HHHHHHHHHHHHHHcCCC
Confidence 35788999987 9999999988888999 8999999888776554 344332 12 2222 233333343332 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 345 d~li~nAg~ 353 (520)
T PRK06484 345 DVLVNNAGI 353 (520)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.075 Score=46.47 Aligned_cols=76 Identities=22% Similarity=0.278 Sum_probs=48.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE----EeCCCCCCchHHHHHHhhc--CCCc
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE----FVNPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~----~i~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++|+|+ |++|...++.+...|+ +|+.+++++++++.. +..+... ..|..+ ..+..+.+.+.. .+++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~-~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGA-ELFLTDRDADGLAQTVADARALGGTVPEHRALDISD-YDAVAAFAADIHAAHGSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCC-HHHHHHHHHHHHHhcCCC
Confidence 6899987 9999999988888898 788888887665433 2233321 123322 223333333322 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.082 Score=45.08 Aligned_cols=79 Identities=18% Similarity=0.236 Sum_probs=50.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+.+++|.|+ |.+|...+..+...|+ +|+.+++++++.+.. +..+... ++..+- +..++.+.+.+.. .+++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGV-NVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 578999987 9999998888888899 899998887664433 2223222 222221 1233333444322 2379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 86 d~vi~~ag~ 94 (239)
T PRK07666 86 DILINNAGI 94 (239)
T ss_pred cEEEEcCcc
Confidence 999999874
|
|
| >PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1 | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.0084 Score=47.66 Aligned_cols=85 Identities=20% Similarity=0.260 Sum_probs=53.0
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC----CchHHHHHHhhcCCCccEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~----~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
|+|+|+|.+|...+..++..|. .|..+.+.+ +.+..++.|........+. ....... ....+.+|+||-|+-
T Consensus 1 I~I~G~GaiG~~~a~~L~~~g~-~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~D~viv~vK 76 (151)
T PF02558_consen 1 ILIIGAGAIGSLYAARLAQAGH-DVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP--SADAGPYDLVIVAVK 76 (151)
T ss_dssp EEEESTSHHHHHHHHHHHHTTC-EEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH--GHHHSTESEEEE-SS
T ss_pred CEEECcCHHHHHHHHHHHHCCC-ceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc--hhccCCCcEEEEEec
Confidence 6899999999888887777898 899998887 7777766654222111000 0000000 111237999999998
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
..+ ...+++.+++
T Consensus 77 a~~-~~~~l~~l~~ 89 (151)
T PF02558_consen 77 AYQ-LEQALQSLKP 89 (151)
T ss_dssp GGG-HHHHHHHHCT
T ss_pred ccc-hHHHHHHHhh
Confidence 755 5566666654
|
1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B .... |
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.091 Score=45.76 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=48.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||.|+ +++|.+.++.+...|+ +|+.+.+.+...+.++ +++....+ |.. +.++..+.+.+.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGA-ELAFTYVVDKLEERVRKMAAELDSELVFRCDVA-SDDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHhccCCceEEECCCC-CHHHHHHHHHHHHHHh
Confidence 4678999983 5899998888888999 7887755443222232 23332222 222 2234444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|-
T Consensus 83 g~iD~lVnnAG~ 94 (261)
T PRK08690 83 DGLDGLVHSIGF 94 (261)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.078 Score=50.98 Aligned_cols=79 Identities=22% Similarity=0.314 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE---EeCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~---~i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++.++++.+ ++++... ..|..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGD-QVVVADRNVERARERADSLGPDHHALAMDVSD-EAQIREGFEQLHREFGRID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEeccCC-HHHHHHHHHHHHHHhCCCC
Confidence 5688999987 9999999998889999 899998888876544 4455432 123322 234444444432 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999874
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.05 Score=45.71 Aligned_cols=34 Identities=38% Similarity=0.561 Sum_probs=30.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+.+.|..+++.+|.+
T Consensus 21 ~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 21 QATVAICGLGGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3679999999999999999999999889999887
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.11 Score=45.80 Aligned_cols=79 Identities=13% Similarity=0.245 Sum_probs=50.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHH-HHHhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFD-RAKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~---~~~-~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|++.++.+...|+ +|+.++++++ +++ +..+++....+ |..+ ..+..+.+.+.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~-~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGA-ELAFTYLNEALKKRVEPIAQELGSDYVYELDVSK-PEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCceEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4688999987 4899998888888899 8888877742 222 22345543322 3322 233444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 82 g~iDilVnnAG~ 93 (274)
T PRK08415 82 GKIDFIVHSVAF 93 (274)
T ss_pred CCCCEEEECCcc
Confidence 479999999884
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.1 Score=45.94 Aligned_cols=42 Identities=26% Similarity=0.226 Sum_probs=34.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.++++++|+|+|++|.+++..+...|+ +|+++++++++.+.+
T Consensus 115 ~~~k~vliiGaGg~g~aia~~L~~~g~-~v~v~~R~~~~~~~l 156 (270)
T TIGR00507 115 RPNQRVLIIGAGGAARAVALPLLKADC-NVIIANRTVSKAEEL 156 (270)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 457889999999999998888888898 899998888775433
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.088 Score=47.17 Aligned_cols=78 Identities=21% Similarity=0.240 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHH----HHHhcCCCE-Ee--CCCCCCchHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----------KKFD----RAKNFGVTE-FV--NPKDHDKPIQQ 255 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----------~~~~----~~~~~ga~~-~i--~~~~~~~~~~~ 255 (291)
.++++||+|+ +++|++.++.+...|+ +|+.++++. ++++ .+++.+... .+ |..+ ..+...
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 84 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGA-TVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLV-PEQVRA 84 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCC-HHHHHH
Confidence 4689999988 8999999988888999 888887762 2222 223334322 22 2222 233443
Q ss_pred HHHhhc--CCCccEEEEcC-C
Q 022865 256 VLVDLT--DGGVDYSFECI-G 273 (291)
Q Consensus 256 ~v~~~~--~gg~d~v~d~~-g 273 (291)
.+.+.. -+++|++|+++ |
T Consensus 85 ~~~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 85 LVERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHHHcCCccEEEECCcc
Confidence 443332 24799999998 6
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.086 Score=45.61 Aligned_cols=79 Identities=20% Similarity=0.216 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH---HHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR---AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~---~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ +.+|...++.+...|+ +|+.+.++++..++ ..+.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGA-DIIITTHGTNWDETRRLIEKEGRKVTFVQVDLTK-PESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999988888999 78888776322222 22333321 22 2222 223333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++.+.|.
T Consensus 92 id~li~~ag~ 101 (258)
T PRK06935 92 IDILVNNAGT 101 (258)
T ss_pred CCEEEECCCC
Confidence 9999999874
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.074 Score=46.96 Aligned_cols=79 Identities=19% Similarity=0.342 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee----CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV----NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i----~~~~~~~~~~~~v~~~~-- 261 (291)
.+++|+|.|+ +++|...+.-.-.+|+ +++.+.+..++++.. ++.+..+ ++ |.. +.++..+.+.+..
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~-~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs-~~~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGA-KLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVS-DEESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-ceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccC-CHHHHHHHHHHHHHh
Confidence 4688999998 9999887776668888 666666666665555 4455544 22 211 1233444443322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
-|++|+.+|..|-
T Consensus 89 fg~vDvLVNNAG~ 101 (282)
T KOG1205|consen 89 FGRVDVLVNNAGI 101 (282)
T ss_pred cCCCCEEEecCcc
Confidence 3489999998883
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.1 Score=46.20 Aligned_cols=80 Identities=26% Similarity=0.229 Sum_probs=49.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHH-HHHh---cCCCE-Ee--CCCCCCchHHH
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFD-RAKN---FGVTE-FV--NPKDHDKPIQQ 255 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~---------~~~~-~~~~---~ga~~-~i--~~~~~~~~~~~ 255 (291)
-+++++||+|+ +++|...++.+...|+ +|+.++++. ++++ .+.+ .+... .+ |..+ ..+..+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~-~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~ 81 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIAD-WDGAAN 81 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCC-HHHHHH
Confidence 35789999987 9999998888888899 788776553 3322 2222 23322 22 2222 233333
Q ss_pred HHHhhc--CCCccEEEEcCCC
Q 022865 256 VLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 256 ~v~~~~--~gg~d~v~d~~g~ 274 (291)
.+.+.. .+.+|++|++.|.
T Consensus 82 ~~~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 82 LVDAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 444332 2479999999884
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.095 Score=45.79 Aligned_cols=79 Identities=19% Similarity=0.263 Sum_probs=47.9
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|++ ++|.+.++.+...|+ +|+.+++++...+.+++ .+....+ |..+ ..++.+.+.+.. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~-~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAE-DASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCC-EEEEEecchhHHHHHHHHHhccCCceEeecCCCC-HHHHHHHHHHHHhhc
Confidence 46889999873 799998888878899 78887776321222222 2222222 2222 233444444432 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|++|++.|.
T Consensus 83 g~iD~linnAg~ 94 (262)
T PRK07984 83 PKFDGFVHSIGF 94 (262)
T ss_pred CCCCEEEECCcc
Confidence 479999999973
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.16 Score=40.96 Aligned_cols=80 Identities=15% Similarity=0.231 Sum_probs=48.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+.+|+|+|+|.+|..-++.+...|+ +|++++ ++..+.+.+++.-.. .... + .+..-.++|+||-+++
T Consensus 12 ~~~~vlVvGGG~va~rka~~Ll~~ga-~V~VIs--p~~~~~l~~l~~i~~-~~~~----~----~~~dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGGGKIAYRKASGLKDTGA-FVTVVS--PEICKEMKELPYITW-KQKT----F----SNDDIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEc--CccCHHHHhccCcEE-Eecc----c----ChhcCCCceEEEECCC
Confidence 56899999999999988888878898 788773 333233334432111 1111 1 1100126899999999
Q ss_pred ChHHHHHHHHHhh
Q 022865 274 NVSVMRAALECCH 286 (291)
Q Consensus 274 ~~~~~~~~~~~l~ 286 (291)
++. .+..+..++
T Consensus 80 d~e-~N~~i~~~a 91 (157)
T PRK06719 80 QHA-VNMMVKQAA 91 (157)
T ss_pred CHH-HHHHHHHHH
Confidence 876 444444443
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.1 Score=45.41 Aligned_cols=79 Identities=19% Similarity=0.235 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||.|+ + ++|.+.++.+...|+ +|+.++++++..+.+ .+++....+ |..+ ..+..+.+.+.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~-~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGA-ELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTN-PKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCC-EEEEEeCchHHHHHHHHHHHhcCCceEEEccCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 4 799998888778899 788877764222222 233433322 3322 234444444432 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 85 g~iDilVnnag~ 96 (260)
T PRK06603 85 GSFDFLLHGMAF 96 (260)
T ss_pred CCccEEEEcccc
Confidence 479999998873
|
|
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.13 Score=50.90 Aligned_cols=87 Identities=17% Similarity=0.281 Sum_probs=63.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.++|+|.|.|.+|+..++.++..|. .++++|.++++.+.+++.|.+.++ -+. .-.+.+++.--..+|.++-++++
T Consensus 400 ~~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t~~~~L~~agi~~A~~vvv~~~d 474 (621)
T PRK03562 400 QPRVIIAGFGRFGQIVGRLLLSSGV-KMTVLDHDPDHIETLRKFGMKVFY-GDA---TRMDLLESAGAAKAEVLINAIDD 474 (621)
T ss_pred cCcEEEEecChHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhcCCeEEE-EeC---CCHHHHHhcCCCcCCEEEEEeCC
Confidence 3579999999999999999999999 899999999999999998864332 221 11223444322379999999998
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
+..-......++
T Consensus 475 ~~~n~~i~~~ar 486 (621)
T PRK03562 475 PQTSLQLVELVK 486 (621)
T ss_pred HHHHHHHHHHHH
Confidence 665444444443
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.032 Score=47.33 Aligned_cols=98 Identities=18% Similarity=0.209 Sum_probs=62.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....++++++||-+|+|. |..++.+++..+. .+|++++.+++..+.+++ ++.+.+..... +..+.. .
T Consensus 69 ~~~~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~---d~~~~~--~ 142 (215)
T TIGR00080 69 MTELLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVG---DGTQGW--E 142 (215)
T ss_pred HHHHhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEEC---CcccCC--c
Confidence 44556788999999998866 7777788887653 369999999987777653 34322111111 110000 0
Q ss_pred cCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 261 TDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
..+.||+|+-............+.|+++ |
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~g-G 171 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEG-G 171 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcC-c
Confidence 1237998886655556677788889998 5
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.1 Score=42.74 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+|+|+|+|++|...++.+...|..+++.+|.+.
T Consensus 1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~ 33 (174)
T cd01487 1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV 33 (174)
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 488999999999999999899998899988775
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.1 Score=45.74 Aligned_cols=79 Identities=16% Similarity=0.161 Sum_probs=50.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCC-EEeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVT-EFVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~-~~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
++++||+|+ |.+|...++.+...|+ +|+.++++.++++.+.+ ++.. ..+..+- +..++.+.+.... .+++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGD-RVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999987 9999998888877898 89999888877655543 2221 1221111 1223333333322 2478999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+.|.
T Consensus 82 i~~ag~ 87 (275)
T PRK08263 82 VNNAGY 87 (275)
T ss_pred EECCCC
Confidence 999884
|
|
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.22 Score=40.18 Aligned_cols=43 Identities=30% Similarity=0.434 Sum_probs=35.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.|+
T Consensus 3 ~Ig~IGlG~mG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~g~ 45 (163)
T PF03446_consen 3 KIGFIGLGNMGSAMARNLAKAGY-EVTVYDRSPEKAEALAEAGA 45 (163)
T ss_dssp EEEEE--SHHHHHHHHHHHHTTT-EEEEEESSHHHHHHHHHTTE
T ss_pred EEEEEchHHHHHHHHHHHHhcCC-eEEeeccchhhhhhhHHhhh
Confidence 68899999999998888888899 89999999999888877664
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.43 E-value=0.16 Score=43.45 Aligned_cols=75 Identities=23% Similarity=0.286 Sum_probs=55.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH--hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK--NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~--~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+++|+|+|.+|...++.+...|. .|++++.++++.+... ++.. .++.-+. .-.+.++++--..+|+++-++|+
T Consensus 2 ~iiIiG~G~vG~~va~~L~~~g~-~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~---t~~~~L~~agi~~aD~vva~t~~ 76 (225)
T COG0569 2 KIIIIGAGRVGRSVARELSEEGH-NVVLIDRDEERVEEFLADELDT-HVVIGDA---TDEDVLEEAGIDDADAVVAATGN 76 (225)
T ss_pred EEEEECCcHHHHHHHHHHHhCCC-ceEEEEcCHHHHHHHhhhhcce-EEEEecC---CCHHHHHhcCCCcCCEEEEeeCC
Confidence 58899999999999999999999 9999999999877733 3544 3443332 22345666533489999999998
Q ss_pred hH
Q 022865 275 VS 276 (291)
Q Consensus 275 ~~ 276 (291)
..
T Consensus 77 d~ 78 (225)
T COG0569 77 DE 78 (225)
T ss_pred CH
Confidence 54
|
|
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=95.42 E-value=0.14 Score=42.97 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..++..+-.+|.++++.+|..
T Consensus 21 ~s~VlIiG~gglG~evak~La~~GVg~i~lvD~d 54 (197)
T cd01492 21 SARILLIGLKGLGAEIAKNLVLSGIGSLTILDDR 54 (197)
T ss_pred hCcEEEEcCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 4679999999999999999999999999998765
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.11 Score=45.16 Aligned_cols=79 Identities=23% Similarity=0.363 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.+++++|+|+ +.+|...+..+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..+..+.+.+.. -+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGA-TIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTD-EDGVQAMVSQIEKEVG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 5678999987 9999988887778899 7888888877654332 234322 12 2222 223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999884
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.40 E-value=0.11 Score=44.44 Aligned_cols=79 Identities=20% Similarity=0.269 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhcC--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~~-- 262 (291)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+.+ +..+... .+ |..+ ..++.+.+.+...
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGA-HVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTD-EESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCC-EEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHhC
Confidence 3578999988 9999999988888898 7888777543 33222 2223221 22 3222 2333333333221
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++.+.|.
T Consensus 83 ~~~d~vi~~ag~ 94 (248)
T PRK07806 83 GGLDALVLNASG 94 (248)
T ss_pred CCCcEEEECCCC
Confidence 368999988764
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.39 E-value=0.079 Score=51.00 Aligned_cols=74 Identities=15% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+.+|+|+|+|.+|.+++..+...|+.+|+++.++.++.+.+. +++...+ ..... .+ +.+.. ..+|+||.|++
T Consensus 266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~-~d----l~~al-~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPL-DE----MLACA-AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecH-hh----HHHHH-hcCCEEEEccC
Confidence 678999999999999999998999878999999988865554 4532111 11100 11 12221 25899999987
Q ss_pred Ch
Q 022865 274 NV 275 (291)
Q Consensus 274 ~~ 275 (291)
.+
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 54
|
|
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.38 E-value=0.091 Score=46.64 Aligned_cols=93 Identities=12% Similarity=0.093 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--------CEEeCCCCCCchHHHHHHhhcCCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--------TEFVNPKDHDKPIQQVLVDLTDGG 264 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga--------~~~i~~~~~~~~~~~~v~~~~~gg 264 (291)
.+.++||++|+|. |..+..+++..+..+|++++.+++-.+.++++-. +.-+.... .+..+.+.. ..+.
T Consensus 75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~--~Da~~~l~~-~~~~ 150 (283)
T PRK00811 75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVI--GDGIKFVAE-TENS 150 (283)
T ss_pred CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEE--CchHHHHhh-CCCc
Confidence 3457899998866 7777778887777799999999999888876421 10010000 123334443 3448
Q ss_pred ccEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
+|+||--... ...++.+.+.|+++|
T Consensus 151 yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gG 185 (283)
T PRK00811 151 FDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDG 185 (283)
T ss_pred ccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCc
Confidence 9988764321 344677788898883
|
|
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.37 E-value=0.096 Score=45.02 Aligned_cols=34 Identities=41% Similarity=0.493 Sum_probs=30.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 27 ~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D 60 (231)
T PRK08328 27 KAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQ 60 (231)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4679999999999999999999999999998744
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.092 Score=46.36 Aligned_cols=78 Identities=22% Similarity=0.268 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH----HHHHhcC-CC-EEeCCCCCCchHH---HHHHhhcCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF----DRAKNFG-VT-EFVNPKDHDKPIQ---QVLVDLTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~----~~~~~~g-a~-~~i~~~~~~~~~~---~~v~~~~~g 263 (291)
.|+.|||.|+ +++|.+.++-...+|+ +++..|.+++.. +..++.| +. +..|..+ .+++. +.+++.. |
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~-~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~-~eei~~~a~~Vk~e~-G 113 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGA-KLVLWDINKQGNEETVKEIRKIGEAKAYTCDISD-REEIYRLAKKVKKEV-G 113 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCC-eEEEEeccccchHHHHHHHHhcCceeEEEecCCC-HHHHHHHHHHHHHhc-C
Confidence 5889999987 8999887766667788 787777776533 3334444 21 2334333 23333 3333332 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++|.+|-
T Consensus 114 ~V~ILVNNAGI 124 (300)
T KOG1201|consen 114 DVDILVNNAGI 124 (300)
T ss_pred CceEEEecccc
Confidence 79999999883
|
|
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.15 Score=49.79 Aligned_cols=76 Identities=17% Similarity=0.222 Sum_probs=56.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
++++|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...+.-.-. -.+.+++..-..+|.++-+++++
T Consensus 418 ~hiiI~G~G~~G~~la~~L~~~g~-~vvvId~d~~~~~~~~~~g~~~i~GD~~----~~~~L~~a~i~~a~~viv~~~~~ 492 (558)
T PRK10669 418 NHALLVGYGRVGSLLGEKLLAAGI-PLVVIETSRTRVDELRERGIRAVLGNAA----NEEIMQLAHLDCARWLLLTIPNG 492 (558)
T ss_pred CCEEEECCChHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHCCCeEEEcCCC----CHHHHHhcCccccCEEEEEcCCh
Confidence 578999999999999999999998 8999999999999999887654432211 12334443223789888777764
Q ss_pred H
Q 022865 276 S 276 (291)
Q Consensus 276 ~ 276 (291)
.
T Consensus 493 ~ 493 (558)
T PRK10669 493 Y 493 (558)
T ss_pred H
Confidence 4
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.11 Score=44.76 Aligned_cols=79 Identities=19% Similarity=0.240 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +.+|...+..+...|+ +|+.+++++++.+.+ ++.+.+. .+ |..+ ..+..+.+.... .+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~-~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITS-EQELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4689999987 9999999988888899 788887777665433 2223221 22 2222 223333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.099 Score=46.53 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--h----HHHHHhcCCCEE-e--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--K----FDRAKNFGVTEF-V--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~----~~~~~~~ga~~~-i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |.+|...+..+...|+ +|+.+.++++ . .+.+++.+.... + |..+ ..+..+.+.+..
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 131 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGA-DIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKD-EAFCRQLVERAVKE 131 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4679999987 9999998888888899 7777654332 1 222333443322 2 2222 223333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 132 ~g~iD~lV~nAg~ 144 (300)
T PRK06128 132 LGGLDILVNIAGK 144 (300)
T ss_pred hCCCCEEEECCcc
Confidence 2479999999884
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.30 E-value=0.16 Score=45.52 Aligned_cols=71 Identities=23% Similarity=0.456 Sum_probs=49.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|.|+|.|.+|...+..++..|. .+|+++++++++++.+++.|....+.. +..+.+ ..+|+||.|+..
T Consensus 7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~~-----~~~~~~-----~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVTT-----SAAEAV-----KGADLVILCVPV 76 (307)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceecC-----CHHHHh-----cCCCEEEECCCH
Confidence 579999999999998888888884 379999999998888888775321110 111111 247888888776
Q ss_pred hH
Q 022865 275 VS 276 (291)
Q Consensus 275 ~~ 276 (291)
..
T Consensus 77 ~~ 78 (307)
T PRK07502 77 GA 78 (307)
T ss_pred HH
Confidence 43
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.12 Score=51.70 Aligned_cols=79 Identities=24% Similarity=0.395 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE--Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE--FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~--~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |.+|...++.+...|+ +|+.++++.++++... + .+... .+ |..+ ..++.+.+.+..
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga-~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd-~~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGA-HVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTD-EQAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4688999987 9999999988888899 8999988887655432 2 23211 12 2222 233444444322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 2479999999884
|
|
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.12 Score=46.54 Aligned_cols=96 Identities=18% Similarity=0.087 Sum_probs=61.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC-----CchHHHHHHhhcCCCccE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-----DKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~-----~~~~~~~v~~~~~gg~d~ 267 (291)
.+.++||++|+|. |.++..++++-+..+|++++.+++-.++++++-...-...+++ ..+..+.+.+...+.+|+
T Consensus 90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv 168 (308)
T PLN02366 90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA 168 (308)
T ss_pred CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence 4568999998876 6677788888777789999999988888877421100000110 023334454443447997
Q ss_pred EEEcCCC----------hHHHHHHHHHhhccC
Q 022865 268 SFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 268 v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
||--... ...++.+.++|+++|
T Consensus 169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgG 200 (308)
T PLN02366 169 IIVDSSDPVGPAQELFEKPFFESVARALRPGG 200 (308)
T ss_pred EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCc
Confidence 7753322 245778888999984
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.078 Score=45.84 Aligned_cols=73 Identities=26% Similarity=0.269 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++. .+.. ..+ |..+ ..++.+.+.+.. .+++|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~r~~~~~-----~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGA-RVVTTARSRPDD-----LPEGVEFVAADLTT-AEGCAAVARAVLERLGGVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCC-EEEEEeCChhhh-----cCCceeEEecCCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4689999987 9999999988888899 899988876532 1111 122 2222 223333333222 237999
Q ss_pred EEEcCC
Q 022865 268 SFECIG 273 (291)
Q Consensus 268 v~d~~g 273 (291)
+|++.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999987
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.18 Score=43.08 Aligned_cols=75 Identities=16% Similarity=0.110 Sum_probs=48.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EE--eCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EF--VNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~--i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+++|+|+ |++|...+..+...|+ +|+.+++++++++.+.+.+.. .. .|..+ ..++.+.+.+.. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~-~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGW-QVIACGRNQSVLDELHTQSANIFTLAFDVTD-HPGTKAALSQLP-FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCCCeEEEeeCCC-HHHHHHHHHhcc-cCCCEEEEc
Confidence 46899987 9999988877778899 899999998887666543321 12 22222 234444444432 246777766
Q ss_pred CC
Q 022865 272 IG 273 (291)
Q Consensus 272 ~g 273 (291)
.|
T Consensus 79 ag 80 (240)
T PRK06101 79 AG 80 (240)
T ss_pred Cc
Confidence 65
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=95.24 E-value=0.32 Score=40.98 Aligned_cols=80 Identities=21% Similarity=0.225 Sum_probs=49.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+++|||+|+|.+|..-+..+...|+ +|++++.... .++.+.+.|--..+. ..... .. + .++|+||-++
T Consensus 8 ~gk~vlVvGgG~va~rk~~~Ll~~ga-~VtVvsp~~~~~l~~l~~~~~i~~~~-~~~~~---~d---l--~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKARLLLKAGA-QLRVIAEELESELTLLAEQGGITWLA-RCFDA---DI---L--EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCC-EEEEEcCCCCHHHHHHHHcCCEEEEe-CCCCH---HH---h--CCcEEEEECC
Confidence 46799999999999999999999999 8888865542 232233333212221 11111 11 1 2689999999
Q ss_pred CChHHHHHHHH
Q 022865 273 GNVSVMRAALE 283 (291)
Q Consensus 273 g~~~~~~~~~~ 283 (291)
+.+..-.....
T Consensus 78 ~d~~ln~~i~~ 88 (205)
T TIGR01470 78 DDEELNRRVAH 88 (205)
T ss_pred CCHHHHHHHHH
Confidence 98754333333
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.13 Score=44.52 Aligned_cols=75 Identities=20% Similarity=0.313 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+++++|+|+ |++|...++.+...|+ +|+++++++ ++++.... +....+..+-.+. +.+.+.. +++|++|++
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~-~Vi~~~r~~~~~~~~~~~-~~~~~~~~D~~~~---~~~~~~~-~~iDilVnn 86 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGA-KVIGLTHSKINNSESNDE-SPNEWIKWECGKE---ESLDKQL-ASLDVLILN 86 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEECCchhhhhhhcc-CCCeEEEeeCCCH---HHHHHhc-CCCCEEEEC
Confidence 3578999988 9999999988888999 888887776 33222111 1112221111111 1233332 369999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 87 AG~ 89 (245)
T PRK12367 87 HGI 89 (245)
T ss_pred Ccc
Confidence 884
|
|
| >TIGR03215 ac_ald_DH_ac acetaldehyde dehydrogenase (acetylating) | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.22 Score=44.18 Aligned_cols=82 Identities=21% Similarity=0.362 Sum_probs=53.6
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEE-EcCChhh--HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLAV-AEGAKAAGASRVIG-IDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~a-i~~a~~~g~~~v~~-~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.|+|+|.+|... ..+.+.-++ .+.+ ++.++++ +++++++|...... ++...+.+ ..+|+||+++
T Consensus 3 rVAIIG~G~IG~~h~~~ll~~~~~-elvaV~d~d~es~~la~A~~~Gi~~~~~------~~e~ll~~---~dIDaV~iaT 72 (285)
T TIGR03215 3 KVAIIGSGNIGTDLMYKLLRSEHL-EMVAMVGIDPESDGLARARELGVKTSAE------GVDGLLAN---PDIDIVFDAT 72 (285)
T ss_pred EEEEEeCcHHHHHHHHHHHhCCCc-EEEEEEeCCcccHHHHHHHHCCCCEEEC------CHHHHhcC---CCCCEEEECC
Confidence 68899999999754 555554466 5555 4445543 56777888654332 12122221 3699999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
++....+.+.+++..|
T Consensus 73 p~~~H~e~a~~al~aG 88 (285)
T TIGR03215 73 SAKAHARHARLLAELG 88 (285)
T ss_pred CcHHHHHHHHHHHHcC
Confidence 9988888887776554
|
Members of this protein family are acetaldehyde dehydrogenase (acetylating), EC 1.2.1.10. This enzyme oxidizes acetaldehyde, using NAD(+), and attaches coenzyme A (CoA), yielding acetyl-CoA. It occurs as a late step in the meta-cleavage pathways of a variety of compounds, including catechol, biphenyl, toluene, salicylate, etc. |
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.0027 Score=48.79 Aligned_cols=42 Identities=24% Similarity=0.415 Sum_probs=28.3
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC--ChHHHHHHHHHhhcc
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG--NVSVMRAALECCHKV 288 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g--~~~~~~~~~~~l~~~ 288 (291)
+||+++++|+. .++ ...+++|+|||++| .+..+..++++| ++
T Consensus 1 LGAd~vidy~~--~~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~ 44 (127)
T PF13602_consen 1 LGADEVIDYRD--TDF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PG 44 (127)
T ss_dssp CT-SEEEETTC--SHH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EE
T ss_pred CCcCEEecCCC--ccc------cCCCCceEEEECCCCccHHHHHHHHHHC-CC
Confidence 68999999985 444 22348999999999 655556666777 66
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=95.19 E-value=0.15 Score=43.23 Aligned_cols=94 Identities=21% Similarity=0.190 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeC-------CCCCCch-HHHHHHhhc-
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-------PKDHDKP-IQQVLVDLT- 261 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~-------~~~~~~~-~~~~v~~~~- 261 (291)
+.++.+||+.|+|. |.-++-+| ..|+ .|+++|.++.-++.+ ++.+...... +.....+ ....+.++.
T Consensus 32 ~~~~~rvLd~GCG~-G~da~~LA-~~G~-~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~ 108 (213)
T TIGR03840 32 LPAGARVFVPLCGK-SLDLAWLA-EQGH-RVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA 108 (213)
T ss_pred CCCCCeEEEeCCCc-hhHHHHHH-hCCC-eEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc
Confidence 35678999999876 77788887 4799 999999999988765 2333211000 0000000 000011111
Q ss_pred --CCCccEEEEcCC--------ChHHHHHHHHHhhcc
Q 022865 262 --DGGVDYSFECIG--------NVSVMRAALECCHKV 288 (291)
Q Consensus 262 --~gg~d~v~d~~g--------~~~~~~~~~~~l~~~ 288 (291)
.+.||.|+|+.- .+..++...++|+++
T Consensus 109 ~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpg 145 (213)
T TIGR03840 109 ADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPG 145 (213)
T ss_pred ccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCC
Confidence 236899999753 134577888999998
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.047 Score=46.72 Aligned_cols=36 Identities=33% Similarity=0.476 Sum_probs=31.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+..+|+|+|.|++|.+++..+-+.|+.+++.+|-++
T Consensus 29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~ 64 (263)
T COG1179 29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDD 64 (263)
T ss_pred hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEeccc
Confidence 346899999999999999999999999988877554
|
|
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.23 Score=45.59 Aligned_cols=35 Identities=31% Similarity=0.341 Sum_probs=31.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+..+|.++++.+|.+.
T Consensus 28 ~~~VlivG~GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 28 DAKVAVIGAGGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 46899999999999999999999999999988764
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.16 Score=46.80 Aligned_cols=35 Identities=29% Similarity=0.389 Sum_probs=31.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
...+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 40 ~~~~VliiG~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIGAGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 34689999999999999999999999899998876
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.14 Score=47.50 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=49.8
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-------HHHhc-CCCEE-eCCCCCCchHHHHHHhhc
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-------RAKNF-GVTEF-VNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-------~~~~~-ga~~~-i~~~~~~~~~~~~v~~~~ 261 (291)
-..+.+|||+|+ |.+|...+..+...|+ +|++++++.++.+ ..... ++..+ .|..+ ...+.+.+...
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~-~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d-~~~l~~~~~~~- 133 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGY-NVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTD-ADSLRKVLFSE- 133 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEEechhhccccchhhHHhhhcCCceEEEeeCCC-HHHHHHHHHHh-
Confidence 345678999988 9999999988888898 8999888765431 11112 22222 12222 23333333332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
+.++|+||+|++.
T Consensus 134 ~~~~D~Vi~~aa~ 146 (390)
T PLN02657 134 GDPVDVVVSCLAS 146 (390)
T ss_pred CCCCcEEEECCcc
Confidence 1169999999874
|
|
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.17 Score=49.84 Aligned_cols=86 Identities=13% Similarity=0.183 Sum_probs=63.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+|+|.|.|.+|...++.++..|. .++++|.++++.+.+++.|...++ -+. .-.+.+++..-..+|.++-+++++
T Consensus 401 ~~vII~G~Gr~G~~va~~L~~~g~-~vvvID~d~~~v~~~~~~g~~v~~-GDa---t~~~~L~~agi~~A~~vv~~~~d~ 475 (601)
T PRK03659 401 PQVIIVGFGRFGQVIGRLLMANKM-RITVLERDISAVNLMRKYGYKVYY-GDA---TQLELLRAAGAEKAEAIVITCNEP 475 (601)
T ss_pred CCEEEecCchHHHHHHHHHHhCCC-CEEEEECCHHHHHHHHhCCCeEEE-eeC---CCHHHHHhcCCccCCEEEEEeCCH
Confidence 578999999999999999999999 899999999999999998864333 221 122334443333799999999987
Q ss_pred HHHHHHHHHhh
Q 022865 276 SVMRAALECCH 286 (291)
Q Consensus 276 ~~~~~~~~~l~ 286 (291)
..-......++
T Consensus 476 ~~n~~i~~~~r 486 (601)
T PRK03659 476 EDTMKIVELCQ 486 (601)
T ss_pred HHHHHHHHHHH
Confidence 65545544444
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.19 Score=42.92 Aligned_cols=77 Identities=19% Similarity=0.218 Sum_probs=47.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEeCCCC-CCchHHHHHHhhcCCCccE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFVNPKD-HDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i~~~~-~~~~~~~~v~~~~~gg~d~ 267 (291)
++++|+|+ |.+|...++.+...|+ +|+++++++++.+... ++ +.. .++..+- +..+..+.+.+.. ..+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGA-RLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCE
Confidence 47899987 9999998888888898 8999988887654332 21 111 1222211 1223333333332 25799
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++.+.|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9988774
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.056 Score=45.19 Aligned_cols=91 Identities=16% Similarity=0.224 Sum_probs=56.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhh-cC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDL-TD 262 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~-~~ 262 (291)
......++.+||-+|+|. |..+..+++. |. +|+++|.+++-++.+++. +...+ .... .++ .+. ..
T Consensus 24 ~~l~~~~~~~vLDiGcG~-G~~a~~La~~-g~-~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~--~d~----~~~~~~ 93 (197)
T PRK11207 24 EAVKVVKPGKTLDLGCGN-GRNSLYLAAN-GF-DVTAWDKNPMSIANLERIKAAENLDNL-HTAV--VDL----NNLTFD 93 (197)
T ss_pred HhcccCCCCcEEEECCCC-CHHHHHHHHC-CC-EEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEe--cCh----hhCCcC
Confidence 334455678899998876 7777888864 77 999999999876666542 22111 0000 111 111 12
Q ss_pred CCccEEEEcCC----C----hHHHHHHHHHhhcc
Q 022865 263 GGVDYSFECIG----N----VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~g----~----~~~~~~~~~~l~~~ 288 (291)
+.||+|+.+.. . ...+....+.|+++
T Consensus 94 ~~fD~I~~~~~~~~~~~~~~~~~l~~i~~~Lkpg 127 (197)
T PRK11207 94 GEYDFILSTVVLMFLEAKTIPGLIANMQRCTKPG 127 (197)
T ss_pred CCcCEEEEecchhhCCHHHHHHHHHHHHHHcCCC
Confidence 36999987533 1 35566777778888
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.14 Score=39.79 Aligned_cols=90 Identities=16% Similarity=0.264 Sum_probs=57.7
Q ss_pred EEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhcCCCEEeCCCCCCc-hH----------------H
Q 022865 198 VAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDK-PI----------------Q 254 (291)
Q Consensus 198 vlI~G~-g~vG~~ai~~a~~~g--~~~v~~~~~~~~~---~~~~~~~ga~~~i~~~~~~~-~~----------------~ 254 (291)
|.|+|+ |.+|..+..+.+... + +|+++.....- .+.+++|....+...+.... .+ .
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f-~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~~~~~~l~~~~~~~~~~~~v~~G~ 79 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKF-EVVALSAGSNIEKLAEQAREFKPKYVVIADEEAYEELKKALPSKGPGIEVLSGP 79 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTE-EEEEEEESSTHHHHHHHHHHHT-SEEEESSHHHHHHHHHHHHHTTSSSEEEESH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCce-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHHhhhcCCCCEEEeCh
Confidence 578898 999999999999997 6 77776554432 34557788877766543110 11 1
Q ss_pred HHHHhhcC-CCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.++.. ..+|+|+..+.+-..+...+..++.+
T Consensus 80 ~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~g 114 (129)
T PF02670_consen 80 EGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAG 114 (129)
T ss_dssp HHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCC
Confidence 22333333 37999999988777788888887654
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.17 Score=44.34 Aligned_cols=81 Identities=20% Similarity=0.275 Sum_probs=49.8
Q ss_pred CCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-HhcCCCEEeCCCC-CCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNFGVTEFVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~---~~~~~~-~~~ga~~~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
-.++++||+|+ +++|++.+..+...|+ +|+.+.+++ ++++.+ ++++....+..+- +..+..+.+.+.. .
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~-~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGA-ELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 35688999986 5899998888888999 888776653 333322 3445322222221 2233444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 479999999874
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.14 Score=43.92 Aligned_cols=77 Identities=25% Similarity=0.343 Sum_probs=49.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+ .+... .+ |..+ ..++.+.+.+.. .+++
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGA-NVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTK-EDEIADMIAAAAAEFGGL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhcCCC
Confidence 57999987 9999999988888899 89999888876654432 22221 12 2222 233333333322 2368
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999988764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=95.07 E-value=0.12 Score=45.01 Aligned_cols=79 Identities=22% Similarity=0.290 Sum_probs=46.3
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC------hhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID------PKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~------~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~ 261 (291)
.+++++|+|+ +++|.+.+..+...|+ +|+.+.++ ++.++.+.+.+.. ..+ |..+ .++..+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~ 82 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGA-ELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQD-DAQIEETFETIK 82 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCC-EEEEEecCcccchHHHHHHHHHhccCcceEeecCcCC-HHHHHHHHHHHH
Confidence 4688999986 4899998888888999 77766432 2223222222211 122 2222 233443443332
Q ss_pred --CCCccEEEEcCCC
Q 022865 262 --DGGVDYSFECIGN 274 (291)
Q Consensus 262 --~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 83 ~~~g~iD~lv~nag~ 97 (258)
T PRK07370 83 QKWGKLDILVHCLAF 97 (258)
T ss_pred HHcCCCCEEEEcccc
Confidence 2479999999884
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.13 Score=44.97 Aligned_cols=79 Identities=18% Similarity=0.261 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------H-HH---HHhcCCCE-E--eCCCCCCchHHHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------F-DR---AKNFGVTE-F--VNPKDHDKPIQQVLV 258 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-------~-~~---~~~~ga~~-~--i~~~~~~~~~~~~v~ 258 (291)
+++++||+|+ |.+|...+..+...|+ +|++++++.++ + +. .++.+... . .|..+ ..++.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~ 82 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGA-NIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRD-EDQVAAAVA 82 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHH
Confidence 4578999988 9999999888888899 88888876532 1 11 12233322 1 23222 233333333
Q ss_pred hhc--CCCccEEEEcCCC
Q 022865 259 DLT--DGGVDYSFECIGN 274 (291)
Q Consensus 259 ~~~--~gg~d~v~d~~g~ 274 (291)
+.. .+.+|++|++.|.
T Consensus 83 ~~~~~~g~id~li~~ag~ 100 (273)
T PRK08278 83 KAVERFGGIDICVNNASA 100 (273)
T ss_pred HHHHHhCCCCEEEECCCC
Confidence 321 1379999999884
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.19 Score=45.48 Aligned_cols=84 Identities=13% Similarity=0.060 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCChHHHHHHHH-HHHcCCCeEEEEcCChhhHHHHH-h----cCCCEEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEG-AKAAGASRVIGIDIDPKKFDRAK-N----FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~-a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
+..++++|+|+|..|.+.+.. +...++++|.++++++++.+.+. + ++.+ +..+. +..+.+ ..+|
T Consensus 125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~----~~~~~~-----~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN----SADEAI-----EEAD 194 (325)
T ss_pred CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC----CHHHHH-----hcCC
Confidence 456789999999999876654 44668889999999988865443 2 3332 11121 222233 2589
Q ss_pred EEEEcCCChHHHHHHHHHhhcc
Q 022865 267 YSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|+.|+++.+-+. . +++++|
T Consensus 195 iVi~aT~s~~p~i-~-~~l~~G 214 (325)
T PRK08618 195 IIVTVTNAKTPVF-S-EKLKKG 214 (325)
T ss_pred EEEEccCCCCcch-H-HhcCCC
Confidence 9999999765333 3 666654
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.088 Score=45.72 Aligned_cols=76 Identities=21% Similarity=0.275 Sum_probs=48.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+++++++.+. .....+ .|..+ ..++.+.+.+.. .+.+|++|
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~-~v~~~~~~~~~~~~---~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGA-NVVNADIHGGDGQH---ENYQFVPTDVSS-AEEVNHTVAEIIEKFGRIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCcccccc---CceEEEEccCCC-HHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999987 9999999988888999 88888877665321 111111 22222 233333343322 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 83 ~~Ag~ 87 (266)
T PRK06171 83 NNAGI 87 (266)
T ss_pred ECCcc
Confidence 99873
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.19 Score=44.14 Aligned_cols=77 Identities=22% Similarity=0.315 Sum_probs=48.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc-CCCcc
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~-~gg~d 266 (291)
+++++|.|+|++|...+..+. .|+ +|+.+++++++++.+ ++ .+.+. .+ |..+ ..++.+.+.+.. .+++|
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGK-KVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS-RESVKALAATAQTLGPVT 78 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCC-HHHHHHHHHHHHhcCCCC
Confidence 357888899999999887774 788 899998887765433 22 23222 22 3222 233444443321 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 79 ~li~nAG~ 86 (275)
T PRK06940 79 GLVHTAGV 86 (275)
T ss_pred EEEECCCc
Confidence 99999984
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.96 E-value=0.14 Score=43.78 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...+..+...|+ +|+. ..++.++.+.+ +..+... .+..+- +..+....+.+.. .+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGY-DIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999988 9999999988888898 6655 45666554332 2234322 221221 2233333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 82 ~id~vi~~ag~ 92 (250)
T PRK08063 82 RLDVFVNNAAS 92 (250)
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.11 Score=44.44 Aligned_cols=79 Identities=18% Similarity=0.221 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhH----HHHHhcCCCEE---eCCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKF----DRAKNFGVTEF---VNPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~----~~~~~~ga~~~---i~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+ .+.+++. +..++.+.... .|..+ ..++.+.+.+.. .
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 79 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGF-KVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGD-WDSTKAAFDKVKAEV 79 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHh
Confidence 3578899987 9999999988888998 66664 3333322 22223344332 22222 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 80 ~~id~li~~ag~ 91 (246)
T PRK12938 80 GEIDVLVNNAGI 91 (246)
T ss_pred CCCCEEEECCCC
Confidence 479999999885
|
|
| >PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.16 Score=38.43 Aligned_cols=81 Identities=20% Similarity=0.287 Sum_probs=56.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEE-EEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA--GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~--g~~~v~-~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.|+|.|.+|......++.. +. +++ +++.++++.+. +++++.+ .+. ++.+.+.. ..+|+|+-++
T Consensus 2 ~v~iiG~G~~g~~~~~~~~~~~~~~-~v~~v~d~~~~~~~~~~~~~~~~-~~~------~~~~ll~~---~~~D~V~I~t 70 (120)
T PF01408_consen 2 RVGIIGAGSIGRRHLRALLRSSPDF-EVVAVCDPDPERAEAFAEKYGIP-VYT------DLEELLAD---EDVDAVIIAT 70 (120)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTTTE-EEEEEECSSHHHHHHHHHHTTSE-EES------SHHHHHHH---TTESEEEEES
T ss_pred EEEEECCcHHHHHHHHHHHhcCCCc-EEEEEEeCCHHHHHHHHHHhccc-chh------HHHHHHHh---hcCCEEEEec
Confidence 588999999998877666555 45 555 47777777665 4567776 221 23333433 2699999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
.+......+.++++.+
T Consensus 71 p~~~h~~~~~~~l~~g 86 (120)
T PF01408_consen 71 PPSSHAEIAKKALEAG 86 (120)
T ss_dssp SGGGHHHHHHHHHHTT
T ss_pred CCcchHHHHHHHHHcC
Confidence 9988888888888765
|
GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A .... |
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.19 Score=43.51 Aligned_cols=78 Identities=12% Similarity=0.193 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH-Hh----cCCC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KN----FGVT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~-~~----~ga~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ +++|...+..+...|+ +|+.+. +++++++.. ++ .+.. ..+ |..+ ..++.+.+.+..
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~ 84 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGV-NIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILE-PETYKELFKKIDED 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHh
Confidence 5689999988 9999999988888999 777664 444444322 22 2322 122 3222 233333333322
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+.+|+++++.|
T Consensus 85 ~g~id~lv~nAg 96 (260)
T PRK08416 85 FDRVDFFISNAI 96 (260)
T ss_pred cCCccEEEECcc
Confidence 247999999886
|
|
| >COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.19 Score=44.51 Aligned_cols=92 Identities=15% Similarity=0.132 Sum_probs=62.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-CEEeCCCCC----CchHHHHHHhhcCCCccEEE-
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDH----DKPIQQVLVDLTDGGVDYSF- 269 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-~~~i~~~~~----~~~~~~~v~~~~~gg~d~v~- 269 (291)
++|||+|.|. |-.+-.++|+...+++++++-+++-.++++++-. ......+.+ -.+-.+.+++... +||+||
T Consensus 78 k~VLiiGgGd-G~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~-~fDvIi~ 155 (282)
T COG0421 78 KRVLIIGGGD-GGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEE-KFDVIIV 155 (282)
T ss_pred CeEEEECCCc-cHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCC-cCCEEEE
Confidence 5999997655 6677788999988899999999999999987422 111111110 0234455665544 799554
Q ss_pred EcCCC---------hHHHHHHHHHhhccC
Q 022865 270 ECIGN---------VSVMRAALECCHKVS 289 (291)
Q Consensus 270 d~~g~---------~~~~~~~~~~l~~~g 289 (291)
|++.. +..++.+-++|+++|
T Consensus 156 D~tdp~gp~~~Lft~eFy~~~~~~L~~~G 184 (282)
T COG0421 156 DSTDPVGPAEALFTEEFYEGCRRALKEDG 184 (282)
T ss_pred cCCCCCCcccccCCHHHHHHHHHhcCCCc
Confidence 55443 577888888898884
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.86 E-value=0.14 Score=49.70 Aligned_cols=79 Identities=23% Similarity=0.282 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.+.++||+|+ |++|...++.+...|+ +|+.++++.++++.+. +.|... .+ |..+ ..+..+.+.+.. .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 391 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGA-EVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSD-ADAMEAFAEWVRAEHG 391 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHhcC
Confidence 4568999987 9999998888888899 7999999887765432 233322 22 2222 233334444332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|+++|.
T Consensus 392 ~id~lv~~Ag~ 402 (582)
T PRK05855 392 VPDIVVNNAGI 402 (582)
T ss_pred CCcEEEECCcc
Confidence 79999999885
|
|
| >PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.23 Score=47.34 Aligned_cols=70 Identities=27% Similarity=0.279 Sum_probs=48.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-----hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-----KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-----~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++|+|+|+|.+|+.++.+++..|+ +|++++..+. ..+.+++.|......... . ....+|+|
T Consensus 15 ~~~~v~viG~G~~G~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~---~--------~~~~~D~V 82 (480)
T PRK01438 15 QGLRVVVAGLGVSGFAAADALLELGA-RVTVVDDGDDERHRALAAILEALGATVRLGPGP---T--------LPEDTDLV 82 (480)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchhhhHHHHHHHHHcCCEEEECCCc---c--------ccCCCCEE
Confidence 46789999999999999999999999 7999886542 223455667654332211 1 01258899
Q ss_pred EEcCCCh
Q 022865 269 FECIGNV 275 (291)
Q Consensus 269 ~d~~g~~ 275 (291)
+-+.|-+
T Consensus 83 v~s~Gi~ 89 (480)
T PRK01438 83 VTSPGWR 89 (480)
T ss_pred EECCCcC
Confidence 9888853
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.49 Score=39.78 Aligned_cols=80 Identities=14% Similarity=0.099 Sum_probs=48.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-h-HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-K-FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~-~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+.+|||+|+|.+|...+..+...|+ +|++++.... . .+++.+ +. ....... +.+. .+ .++|+||-+
T Consensus 9 ~~k~vLVIGgG~va~~ka~~Ll~~ga-~V~VIs~~~~~~l~~l~~~-~~-i~~~~~~----~~~~--~l--~~adlViaa 77 (202)
T PRK06718 9 SNKRVVIVGGGKVAGRRAITLLKYGA-HIVVISPELTENLVKLVEE-GK-IRWKQKE----FEPS--DI--VDAFLVIAA 77 (202)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEcCCCCHHHHHHHhC-CC-EEEEecC----CChh--hc--CCceEEEEc
Confidence 46799999999999998888888898 8888765432 2 222222 21 1111111 0000 01 268999999
Q ss_pred CCChHHHHHHHHHh
Q 022865 272 IGNVSVMRAALECC 285 (291)
Q Consensus 272 ~g~~~~~~~~~~~l 285 (291)
++++. ++..+...
T Consensus 78 T~d~e-lN~~i~~~ 90 (202)
T PRK06718 78 TNDPR-VNEQVKED 90 (202)
T ss_pred CCCHH-HHHHHHHH
Confidence 99877 44444433
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.83 E-value=0.29 Score=41.43 Aligned_cols=96 Identities=24% Similarity=0.293 Sum_probs=63.1
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCE-EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE-FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~-~i~~~~~~~~~~~~v~~ 259 (291)
+.+...+.++++||-+|+|. |..+..+++..+ ..++++++.+++.++.+++. .... ++..+. .. ..
T Consensus 11 ~~~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~--~~-----~~ 82 (241)
T PRK08317 11 TFELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDA--DG-----LP 82 (241)
T ss_pred HHHHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEeccc--cc-----CC
Confidence 34566788899999999976 888889988873 34899999999988888664 1111 111111 00 01
Q ss_pred hcCCCccEEEEcC------CChHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFECI------GNVSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~~------g~~~~~~~~~~~l~~~g 289 (291)
+..+.||+|+... .....++.+.++|+++|
T Consensus 83 ~~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG 118 (241)
T PRK08317 83 FPDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGG 118 (241)
T ss_pred CCCCCceEEEEechhhccCCHHHHHHHHHHHhcCCc
Confidence 2234788877531 22456888888899883
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.82 E-value=0.19 Score=43.71 Aligned_cols=79 Identities=22% Similarity=0.352 Sum_probs=48.6
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHH-HHhcCCCEEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDID---PKKFDR-AKNFGVTEFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~---~~~~~~-~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ +++|++.++.+...|+ +|+.+.+. +++++. .++++....+ |..+ .++..+.+.+.. .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVAS-DEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCC-eEEEEccchHHHHHHHHHHHhcCCcceeeccCCC-HHHHHHHHHHHHHHh
Confidence 4688999984 5899998888878899 78776432 333332 2344432222 2222 234444444433 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 83 g~iD~lvnnAG~ 94 (260)
T PRK06997 83 DGLDGLVHSIGF 94 (260)
T ss_pred CCCcEEEEcccc
Confidence 479999999874
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.24 Score=42.81 Aligned_cols=96 Identities=23% Similarity=0.239 Sum_probs=65.8
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....+.||++|+=.|.|+ |.+++-+|++.|. .+|+.++..++..+.|++ ++....+.... .+ +.+.
T Consensus 86 I~~~~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~--~D----v~~~ 158 (256)
T COG2519 86 IVARLGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL--GD----VREG 158 (256)
T ss_pred HHHHcCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe--cc----cccc
Confidence 34578899999998887765 8888899998874 699999999998888853 44433221111 11 2222
Q ss_pred cCC-Ccc-EEEEcCCChHHHHHHHHHhhcc
Q 022865 261 TDG-GVD-YSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~g-g~d-~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+ .+| +++|.--....++.+.+.|+++
T Consensus 159 ~~~~~vDav~LDmp~PW~~le~~~~~Lkpg 188 (256)
T COG2519 159 IDEEDVDAVFLDLPDPWNVLEHVSDALKPG 188 (256)
T ss_pred ccccccCEEEEcCCChHHHHHHHHHHhCCC
Confidence 222 677 5556655667788888888888
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.17 Score=44.10 Aligned_cols=77 Identities=17% Similarity=0.148 Sum_probs=48.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
++||+|+ |.+|...+..+...|+ +|+.++++.++++.+. ..+.+. .+..+- +..++.+.+.... .+++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGW-RLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899987 9999998888878899 8888888887654332 223222 221111 1123333333221 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 81 lI~~ag~ 87 (270)
T PRK05650 81 IVNNAGV 87 (270)
T ss_pred EEECCCC
Confidence 9999884
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.17 Score=44.86 Aligned_cols=81 Identities=17% Similarity=0.176 Sum_probs=47.9
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HH----HHHhcCCCE-EeCCCC-CCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FD----RAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~----~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
-+++++||+|+ |.+|...+..+...|+ +|+.+++++++ .+ .++..+.+. .+..+- +...+.+.+.+.. .
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~-~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGA-DIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34678999987 9999998888878898 78887766432 11 122223322 222221 1223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|.+.|.
T Consensus 123 ~~iD~lI~~Ag~ 134 (290)
T PRK06701 123 GRLDILVNNAAF 134 (290)
T ss_pred CCCCEEEECCcc
Confidence 379999998874
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.19 Score=46.91 Aligned_cols=74 Identities=24% Similarity=0.312 Sum_probs=47.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC-EEe--CCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EFV--NPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~-~~i--~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
++++++|.|+ |++|.+.+..+...|+ +|+++++++++++... +.... ..+ |..+ . +.+.+.. +++|++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~-~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd--~---~~v~~~l-~~IDiL 249 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGA-KVVALTSNSDKITLEINGEDLPVKTLHWQVGQ--E---AALAELL-EKVDIL 249 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC--H---HHHHHHh-CCCCEE
Confidence 4679999988 9999999888888899 8998888877654322 11111 122 2221 1 2233332 369999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 250 InnAGi 255 (406)
T PRK07424 250 IINHGI 255 (406)
T ss_pred EECCCc
Confidence 998774
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.81 E-value=0.19 Score=42.81 Aligned_cols=79 Identities=23% Similarity=0.352 Sum_probs=48.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhcC--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg 264 (291)
++++||+|+ |.+|...+..+...|+ +|+.+ ++++++.+.+.+ .+... ++..+- +..++.+.+.+... ++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGA-KVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999987 9999998887777898 78777 887766543322 22211 221111 12233333333221 36
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.+.|.
T Consensus 84 id~vi~~ag~ 93 (247)
T PRK05565 84 IDILVNNAGI 93 (247)
T ss_pred CCEEEECCCc
Confidence 9999998874
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=94.78 E-value=0.18 Score=43.30 Aligned_cols=78 Identities=17% Similarity=0.175 Sum_probs=48.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
++++|+|+ |.+|...++.+...|+ +|+.+++++++++.. ++.+... .+..+- +..++.+.+.+.. .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGF-AVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899987 9999999988888999 888888876654332 2233221 222111 1233333343332 23689
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|.+.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99999874
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.72 Score=33.29 Aligned_cols=76 Identities=22% Similarity=0.311 Sum_probs=49.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcC---CCeEE-EEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAG---ASRVI-GIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g---~~~v~-~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+|.|+|+|.+|.+.+.-....| . +|+ +.++++++.+.+ ++++.. +.. .+..+.+. ..|+||-|
T Consensus 1 kI~iIG~G~mg~al~~~l~~~g~~~~-~v~~~~~r~~~~~~~~~~~~~~~-~~~-----~~~~~~~~-----~advvila 68 (96)
T PF03807_consen 1 KIGIIGAGNMGSALARGLLASGIKPH-EVIIVSSRSPEKAAELAKEYGVQ-ATA-----DDNEEAAQ-----EADVVILA 68 (96)
T ss_dssp EEEEESTSHHHHHHHHHHHHTTS-GG-EEEEEEESSHHHHHHHHHHCTTE-EES-----EEHHHHHH-----HTSEEEE-
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCce-eEEeeccCcHHHHHHHHHhhccc-ccc-----CChHHhhc-----cCCEEEEE
Confidence 4778899999999888888888 6 777 448999887666 566643 221 12333343 37999999
Q ss_pred CCChHHHHHHHHHh
Q 022865 272 IGNVSVMRAALECC 285 (291)
Q Consensus 272 ~g~~~~~~~~~~~l 285 (291)
+.... +...++.+
T Consensus 69 v~p~~-~~~v~~~i 81 (96)
T PF03807_consen 69 VKPQQ-LPEVLSEI 81 (96)
T ss_dssp S-GGG-HHHHHHHH
T ss_pred ECHHH-HHHHHHHH
Confidence 98755 44444443
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.22 Score=42.46 Aligned_cols=79 Identities=16% Similarity=0.150 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHHH----hcCCC--EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRAK----NFGVT--EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~~----~~ga~--~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |.+|...+..+...|+ +|++++++. ++.+... ..... ..+ |..+ ..++...+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGY-RVAIHYHRSAAEADALAAELNALRPGSAAALQADLLD-PDALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCC-HHHHHHHHHHHHHH
Confidence 4578999988 9999998888888899 888887753 3332221 11111 122 2222 233333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|+||.+.|.
T Consensus 83 ~~~~d~vi~~ag~ 95 (249)
T PRK09135 83 FGRLDALVNNASS 95 (249)
T ss_pred cCCCCEEEECCCC
Confidence 2368999999883
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.71 E-value=0.25 Score=42.31 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=51.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE--E--eCCCC-CCchHHHHHHhhc
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE--F--VNPKD-HDKPIQQVLVDLT 261 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~--~--i~~~~-~~~~~~~~v~~~~ 261 (291)
..++++++|.|+ |.+|...++.+...|+ +|+.++++.++.+.+ ++.+... + .+... +..++.+.+....
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGA-TVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-cEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999987 9999998888878898 899998887664333 2233221 2 22221 1123333333322
Q ss_pred C--CCccEEEEcCCC
Q 022865 262 D--GGVDYSFECIGN 274 (291)
Q Consensus 262 ~--gg~d~v~d~~g~ 274 (291)
. +.+|.||.+.|.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 379999998764
|
|
| >PRK01683 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=94.69 E-value=0.28 Score=42.58 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=60.5
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCCCCchHHHHHHhhcCCCc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
.....+.++++||=+|+|. |..+..+++..+..+|+++|.+++-++.+++.-.. .++..+ ... + .....+
T Consensus 24 l~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-----~~~-~--~~~~~f 94 (258)
T PRK01683 24 LARVPLENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-----IAS-W--QPPQAL 94 (258)
T ss_pred HhhCCCcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-----hhc-c--CCCCCc
Confidence 3445567888999898865 67777888877544999999999988888754221 122111 110 0 112378
Q ss_pred cEEEEcCC------ChHHHHHHHHHhhccC
Q 022865 266 DYSFECIG------NVSVMRAALECCHKVS 289 (291)
Q Consensus 266 d~v~d~~g------~~~~~~~~~~~l~~~g 289 (291)
|+|+.... ....++.+.+.|+++|
T Consensus 95 D~v~~~~~l~~~~d~~~~l~~~~~~LkpgG 124 (258)
T PRK01683 95 DLIFANASLQWLPDHLELFPRLVSLLAPGG 124 (258)
T ss_pred cEEEEccChhhCCCHHHHHHHHHHhcCCCc
Confidence 98876433 2356778888888883
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.13 Score=49.75 Aligned_cols=41 Identities=34% Similarity=0.477 Sum_probs=35.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+++++|+|+|++|.+++..+...|+ +|+.++++.++.+.+
T Consensus 378 ~~k~vlIlGaGGagrAia~~L~~~G~-~V~i~nR~~e~a~~l 418 (529)
T PLN02520 378 AGKLFVVIGAGGAGKALAYGAKEKGA-RVVIANRTYERAKEL 418 (529)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHH
Confidence 46789999999999999999999999 899998887765554
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.67 E-value=0.35 Score=45.61 Aligned_cols=79 Identities=18% Similarity=0.146 Sum_probs=56.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+..+++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+.+ .++.-+. .-.+.+.+..-..+|.|+-++
T Consensus 230 ~~~~iiIiG~G~~g~~l~~~L~~~~~-~v~vid~~~~~~~~~~~~~~~~~~i~gd~---~~~~~L~~~~~~~a~~vi~~~ 305 (453)
T PRK09496 230 PVKRVMIVGGGNIGYYLAKLLEKEGY-SVKLIERDPERAEELAEELPNTLVLHGDG---TDQELLEEEGIDEADAFIALT 305 (453)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHCCCCeEEECCC---CCHHHHHhcCCccCCEEEECC
Confidence 45789999999999999999989899 899999999988877654322 2332221 222345444334799999888
Q ss_pred CChH
Q 022865 273 GNVS 276 (291)
Q Consensus 273 g~~~ 276 (291)
++..
T Consensus 306 ~~~~ 309 (453)
T PRK09496 306 NDDE 309 (453)
T ss_pred CCcH
Confidence 8643
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.19 Score=43.58 Aligned_cols=78 Identities=18% Similarity=0.339 Sum_probs=47.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH-Hhc-CCC-EE--eCCCCCCchHHHHHHhhcC
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA-KNF-GVT-EF--VNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~---~~~~~~-~~~-ga~-~~--i~~~~~~~~~~~~v~~~~~ 262 (291)
.+++++|+|+ +++|.+.++.+...|+ +|+.+.++. ++++.+ .++ +.. .. .|..+ ..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 83 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGA-KLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTS-DEEITACFETIKE 83 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEecCcccchHHHHHHHHHcCCCceEEEecCCCC-HHHHHHHHHHHHH
Confidence 4688999986 5999998888888899 788875542 333333 333 221 12 23222 2344444444322
Q ss_pred --CCccEEEEcCC
Q 022865 263 --GGVDYSFECIG 273 (291)
Q Consensus 263 --gg~d~v~d~~g 273 (291)
+++|+++++.|
T Consensus 84 ~~g~ld~lv~nag 96 (257)
T PRK08594 84 EVGVIHGVAHCIA 96 (257)
T ss_pred hCCCccEEEECcc
Confidence 47999999887
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.3 Score=42.81 Aligned_cols=93 Identities=12% Similarity=0.095 Sum_probs=61.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCC---EEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVT---EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-ga~---~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.++++||++|.|. |.++..+++.....+|++++.+++-.+.++++ +.. .-+.... .+..+.+.+. .+.+|+|
T Consensus 65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~--~Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIE--ADGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEE--CCHHHHHHhC-CCCCCEE
Confidence 3467899999876 77888888887655999999999999998764 321 1111110 2333444432 3479977
Q ss_pred E-EcCC---------ChHHHHHHHHHhhccC
Q 022865 269 F-ECIG---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 269 ~-d~~g---------~~~~~~~~~~~l~~~g 289 (291)
+ |... ....++.+.+.|+++|
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgG 171 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDG 171 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCc
Confidence 6 3321 1467888899999983
|
|
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.48 Score=39.37 Aligned_cols=97 Identities=22% Similarity=0.277 Sum_probs=56.2
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcC
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.....++++++||=+|+|. |..++.+++.....+|+++|.+++..+.+++ ++.+.+..... +..+.+....
T Consensus 33 ~~~l~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~---d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG---SAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC---chHHHHhhCC-
Confidence 3445667888888887754 5566666766543499999999988777753 45432211111 1112222221
Q ss_pred CCcc-EEEEcCCC-hHHHHHHHHHhhcc
Q 022865 263 GGVD-YSFECIGN-VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d-~v~d~~g~-~~~~~~~~~~l~~~ 288 (291)
..+| ++++.... ...++.+.+.|+++
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~Lkpg 135 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPG 135 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCC
Confidence 2234 44443222 46678888889888
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.65 E-value=0.23 Score=42.35 Aligned_cols=80 Identities=18% Similarity=0.153 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~----~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
++++++|+|+ |.+|...+..+...|+ +++.+.++.+ +.+ ...+.+... .+..+- +..++.+.+.+.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGF-AVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999998888999 6666554432 222 222333321 222221 1223333333321 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (245)
T PRK12937 83 RIDVLVNNAGV 93 (245)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.2 Score=45.30 Aligned_cols=39 Identities=26% Similarity=0.283 Sum_probs=33.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++|.|+|+|.+|...++.+...|+ .|+..|.+++.++.+
T Consensus 8 ~~VaVIGaG~MG~giA~~~a~aG~-~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGSGVIGSGWVARALAHGL-DVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHH
Confidence 579999999999888888878899 999999998765543
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.22 Score=42.98 Aligned_cols=75 Identities=21% Similarity=0.134 Sum_probs=46.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-CEEe--CCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFV--NPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-~~~i--~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
..+|||+|+ |.+|...++.+...|+ +|+++.++.++.......+. -.++ |..+ . . +.+.+....++|+||.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d--~-~-~~l~~~~~~~~d~vi~ 91 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGF-AVKAGVRDVDKAKTSLPQDPSLQIVRADVTE--G-S-DKLVEAIGDDSDAVIC 91 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCC-EEEEEecCHHHHHHhcccCCceEEEEeeCCC--C-H-HHHHHHhhcCCCEEEE
Confidence 578999997 9999999888878898 88888787776543221111 1222 2222 1 1 2232322226999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 92 ~~g~ 95 (251)
T PLN00141 92 ATGF 95 (251)
T ss_pred CCCC
Confidence 8774
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=94.63 E-value=0.22 Score=42.98 Aligned_cols=78 Identities=19% Similarity=0.109 Sum_probs=47.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ +.+|...++.+...|+ +|+.+. ++.++.+.+ +..+... .+ |..+ ..++...+.+.. .+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGF-DIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSD-LPEGAQALDKLIQRLG 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 468999988 9999999998888999 777664 444443322 2344322 22 2222 223333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=94.62 E-value=0.098 Score=47.60 Aligned_cols=77 Identities=19% Similarity=0.111 Sum_probs=46.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC--CCE-EeCCCCCCchHHHHHHhhcCC-CccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG--VTE-FVNPKDHDKPIQQVLVDLTDG-GVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~g--a~~-~i~~~~~~~~~~~~v~~~~~g-g~d~ 267 (291)
++.+|||+|+ |.+|...++.+...|. +|+++++++...... ..++ ... .+..+-.+. +.+.++... ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~---~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGA-EVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA---AKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCC-EEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH---HHHHHHHhhcCCCE
Confidence 4678999987 9999999999888998 898887766543211 1221 111 121111111 223333223 6899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
||.+++.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9999873
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.26 Score=42.72 Aligned_cols=79 Identities=19% Similarity=0.276 Sum_probs=48.7
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHH-HHHhcCCC-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP--KKFD-RAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~-~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.+++++|+|+ +++|.+.++.+...|+ +|+.+++++ +.++ +..+++.. ..+ |..+ ..++.+.+.+.. .
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~-~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~i~~~~~~~~~~~ 83 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGA-EVVLTGFGRALRLTERIAKRLPEPAPVLELDVTN-EEHLASLADRVREHV 83 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCC-EEEEecCccchhHHHHHHHhcCCCCcEEeCCCCC-HHHHHHHHHHHHHHc
Confidence 4678999985 7999998888888899 888887553 3323 33344321 122 2222 233444444332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 84 g~iD~li~nAG~ 95 (256)
T PRK07889 84 DGLDGVVHSIGF 95 (256)
T ss_pred CCCcEEEEcccc
Confidence 479999999874
|
|
| >PRK08300 acetaldehyde dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.32 Score=43.41 Aligned_cols=86 Identities=21% Similarity=0.276 Sum_probs=52.8
Q ss_pred CEEEEEcCChHHHH-HHHHHHHcCCCeEEE-EcCChh--hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLA-VAEGAKAAGASRVIG-IDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~-ai~~a~~~g~~~v~~-~~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
-++.|+|.|.+|.. +..+.+.-++ .+++ ++.+++ .+++++++|..... .++.+.+.......+|+||++
T Consensus 5 lrVAIIGtG~IGt~hm~~l~~~~~v-elvAVvdid~es~gla~A~~~Gi~~~~------~~ie~LL~~~~~~dIDiVf~A 77 (302)
T PRK08300 5 LKVAIIGSGNIGTDLMIKILRSEHL-EPGAMVGIDPESDGLARARRLGVATSA------EGIDGLLAMPEFDDIDIVFDA 77 (302)
T ss_pred CeEEEEcCcHHHHHHHHHHhcCCCc-EEEEEEeCChhhHHHHHHHHcCCCccc------CCHHHHHhCcCCCCCCEEEEC
Confidence 47899999999986 4445443456 5554 545443 34667788864322 122223332111369999999
Q ss_pred CCChHHHHHHHHHhhcc
Q 022865 272 IGNVSVMRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~ 288 (291)
++.....+.+.+++..|
T Consensus 78 T~a~~H~e~a~~a~eaG 94 (302)
T PRK08300 78 TSAGAHVRHAAKLREAG 94 (302)
T ss_pred CCHHHHHHHHHHHHHcC
Confidence 99987777776665543
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.057 Score=40.16 Aligned_cols=77 Identities=21% Similarity=0.245 Sum_probs=47.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.+.+|||+|+|.+|..-++.+...|+ +|++++... +..++ --.... ..+ .+.. .++|+||-+++
T Consensus 6 ~~~~vlVvGgG~va~~k~~~Ll~~gA-~v~vis~~~---~~~~~--~i~~~~-----~~~----~~~l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGGGPVAARKARLLLEAGA-KVTVISPEI---EFSEG--LIQLIR-----REF----EEDL-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEESHHHHHHHHHHCCCTB-EEEEEESSE---HHHHT--SCEEEE-----SS-----GGGC-TTESEEEE-SS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCch---hhhhh--HHHHHh-----hhH----HHHH-hhheEEEecCC
Confidence 46889999999999999999988998 899987765 22221 111111 111 1111 26999999999
Q ss_pred ChHHHHHHHHHhh
Q 022865 274 NVSVMRAALECCH 286 (291)
Q Consensus 274 ~~~~~~~~~~~l~ 286 (291)
++..-....+..+
T Consensus 70 d~~~n~~i~~~a~ 82 (103)
T PF13241_consen 70 DPELNEAIYADAR 82 (103)
T ss_dssp -HHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh
Confidence 9775544444444
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=94.57 E-value=0.25 Score=41.96 Aligned_cols=79 Identities=24% Similarity=0.312 Sum_probs=46.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH-H---HHhcCCCE-Ee--CCCCCCchHHHHHHhhcC--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD-R---AKNFGVTE-FV--NPKDHDKPIQQVLVDLTD-- 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~-~---~~~~ga~~-~i--~~~~~~~~~~~~v~~~~~-- 262 (291)
+++++||+|+ |.+|...+..+...|+ +|+++.++.+ +.+ . .+..+... .+ |..+ ..++.+.+.+...
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGA-NVVINYASSEAGAEALVAEIGALGGKALAVQGDVSD-AESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3568999988 9999999998888899 6766555443 222 1 12223222 22 2222 2333333333322
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|.|+.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 368999999874
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.54 E-value=0.27 Score=45.57 Aligned_cols=79 Identities=20% Similarity=0.205 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC---CCCCCchHHHHHHhhcCC-CccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN---PKDHDKPIQQVLVDLTDG-GVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~---~~~~~~~~~~~v~~~~~g-g~d~v 268 (291)
...+|||+|+ .++++..+..++..|+ +|++++..+........+ +++.+. ...+.+.+.+.+.++... ++|+|
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~-~Vi~~d~~~~~~~~~s~~-~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGH-TVILADSLKYPLSRFSRA-VDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHh-hhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3578999998 5689999999999999 899998886554322222 233321 222234566777776544 79999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+-+...
T Consensus 81 IP~~e~ 86 (389)
T PRK06849 81 IPTCEE 86 (389)
T ss_pred EECChH
Confidence 987664
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.26 Score=43.11 Aligned_cols=78 Identities=18% Similarity=0.144 Sum_probs=49.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
..+++|+|+ |.+|...+..+...|+ +|+++.++.++++.. +..+... .+ |..+ ..++.+.+.+.. -++
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGF-PVALGARRVEKCEELVDKIRADGGEAVAFPLDVTD-PDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHHHHHHHHHHHhcCC
Confidence 458999987 9999999988888899 888887776654432 2233322 11 2221 233333333321 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 88 id~vi~~Ag~ 97 (274)
T PRK07775 88 IEVLVSGAGD 97 (274)
T ss_pred CCEEEECCCc
Confidence 8999999875
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.082 Score=46.94 Aligned_cols=86 Identities=21% Similarity=0.225 Sum_probs=57.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC-
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG- 273 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g- 273 (291)
..|.|+|.|-+|.-++.+|..+|+ +|+..+.+.+|++.+.. |+.+....+.. ..++.+.+. ++|++|..+=
T Consensus 169 ~kv~iiGGGvvgtnaAkiA~glgA-~Vtild~n~~rl~~ldd~f~~rv~~~~st-~~~iee~v~-----~aDlvIgaVLI 241 (371)
T COG0686 169 AKVVVLGGGVVGTNAAKIAIGLGA-DVTILDLNIDRLRQLDDLFGGRVHTLYST-PSNIEEAVK-----KADLVIGAVLI 241 (371)
T ss_pred ccEEEECCccccchHHHHHhccCC-eeEEEecCHHHHhhhhHhhCceeEEEEcC-HHHHHHHhh-----hccEEEEEEEe
Confidence 457888999999999999999999 99999999999988875 44442233322 122222222 4787776531
Q ss_pred -----ChHHHHHHHHHhhcc
Q 022865 274 -----NVSVMRAALECCHKV 288 (291)
Q Consensus 274 -----~~~~~~~~~~~l~~~ 288 (291)
.....++.++.|++|
T Consensus 242 pgakaPkLvt~e~vk~MkpG 261 (371)
T COG0686 242 PGAKAPKLVTREMVKQMKPG 261 (371)
T ss_pred cCCCCceehhHHHHHhcCCC
Confidence 123355566667665
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=94.50 E-value=0.35 Score=41.13 Aligned_cols=70 Identities=26% Similarity=0.360 Sum_probs=48.4
Q ss_pred EEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 198 VAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 198 vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
|+|+|+ |.+|...++.+...+. +|.++.++.. ..+.+++.|+..+ ..+.++ .+.+.+... |+|.||.+++
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~-~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~~---~~~l~~al~-g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGF-SVRALVRDPSSDRAQQLQALGAEVV-EADYDD---PESLVAALK-GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTG-CEEEEESSSHHHHHHHHHHTTTEEE-ES-TT----HHHHHHHHT-TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCC-CcEEEEeccchhhhhhhhcccceEe-ecccCC---HHHHHHHHc-CCceEEeecC
Confidence 689998 9999999999988888 7888777764 3455667888543 333211 223333332 7999999988
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.23 Score=44.04 Aligned_cols=70 Identities=19% Similarity=0.181 Sum_probs=45.2
Q ss_pred hcccchhhhhhhhhhcCC-CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCC
Q 022865 175 LGCGVPTGLGAVWNTAKV-EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKD 248 (291)
Q Consensus 175 l~~~~~ta~~~~~~~~~~-~~g~~vlI~G~g~-vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~ 248 (291)
.+|+....+. +.+..++ -.|++++|+|.|. +|.-++.++...|+ +|+.+.+....++ .++ .+|.++....
T Consensus 138 ~PcTp~ai~~-ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~ga-tVtv~~s~t~~l~~~~~--~ADIVIsAvg 210 (286)
T PRK14175 138 VPCTPLGIME-ILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNA-SVTILHSRSKDMASYLK--DADVIVSAVG 210 (286)
T ss_pred CCCcHHHHHH-HHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCC-eEEEEeCCchhHHHHHh--hCCEEEECCC
Confidence 3444443333 3344443 4789999999965 99999999999999 8888766544332 222 3666665543
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.27 Score=44.12 Aligned_cols=78 Identities=21% Similarity=0.205 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhcCC---C-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGV---T-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~-~~~ga---~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++|.|+ +++|...+..+...| + +|+.+.+++++.+.+ +++.. . ..+ |..+ ..+....+.+.. .+
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~-~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~~ 80 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEW-HVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGS-LDSVRQFVQQFRESGR 80 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCC-EEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCC-HHHHHHHHHHHHHhCC
Confidence 568999988 999999888777889 7 888888888766443 33321 1 112 2222 223333443332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 81 ~iD~lI~nAG~ 91 (314)
T TIGR01289 81 PLDALVCNAAV 91 (314)
T ss_pred CCCEEEECCCc
Confidence 79999999874
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.27 Score=41.74 Aligned_cols=77 Identities=18% Similarity=0.194 Sum_probs=45.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hhc---CCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KNF---GVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~-~~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ |.+|...+..+...|+ +++++.+ ++++.+.. .++ +... .+ |..+ ..++.+.+.+.. .+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGY-RVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSS-FESCKAAVAKVEAELGP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCC-HHHHHHHHHHHHHHcCC
Confidence 46899987 9999999988888999 7777766 44433222 222 2211 22 2222 233333333322 236
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|.||.+.|.
T Consensus 79 id~vi~~ag~ 88 (242)
T TIGR01829 79 IDVLVNNAGI 88 (242)
T ss_pred CcEEEECCCC
Confidence 9999999874
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.32 Score=43.01 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=64.7
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
....+..+.++||=+|.+. |..++.+|+.++ -.+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 111 ~~L~~~~~ak~VLEIGT~t-GySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~--GdA~e~L~~l~ 187 (278)
T PLN02476 111 AMLVQILGAERCIEVGVYT-GYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKH--GLAAESLKSMI 187 (278)
T ss_pred HHHHHhcCCCeEEEecCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHH
Confidence 3445566788999998743 777778888774 2379999999998887753 56543222221 23334444432
Q ss_pred ----CCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 262 ----DGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 ----~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||+||--... ...++.+++.|++||
T Consensus 188 ~~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GG 222 (278)
T PLN02476 188 QNGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGG 222 (278)
T ss_pred hcccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCc
Confidence 2479977755443 456888899999984
|
|
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.27 Score=42.36 Aligned_cols=99 Identities=20% Similarity=0.194 Sum_probs=62.8
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc-
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~- 261 (291)
...+..+.++||-+|.|. |..++.+++.++ ..+|+.++.+++..+.+++ .|....+.... .+..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiGt~~-G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~--gda~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIGVFT-GYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQ--SDALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEecCcc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--ccHHHHHHHHHh
Confidence 345556778999998743 667777777763 4499999999998887754 34332221111 22333444432
Q ss_pred ---CCCccEEEEcCC---ChHHHHHHHHHhhccC
Q 022865 262 ---DGGVDYSFECIG---NVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ---~gg~d~v~d~~g---~~~~~~~~~~~l~~~g 289 (291)
.+.||+||--.. -...+..+++++++||
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG 172 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGG 172 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCe
Confidence 237998885432 2456788889999883
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.26 Score=42.36 Aligned_cols=78 Identities=21% Similarity=0.237 Sum_probs=47.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCC-EEeCCCC-CCchHHHHHHhhcC--CCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVT-EFVNPKD-HDKPIQQVLVDLTD--GGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~----~~~~~ga~-~~i~~~~-~~~~~~~~v~~~~~--gg~ 265 (291)
+++||.|+ |.+|...+..+...|+ +|+.+++... +.+ ..++.+.. ..+..+- +..++.+.+.+... +.+
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGF-DLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57899988 9999999988888899 8888876532 221 12223332 2222221 12333344443321 379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (256)
T PRK12745 82 DCLVNNAGV 90 (256)
T ss_pred CEEEECCcc
Confidence 999999874
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=94.38 E-value=0.22 Score=44.14 Aligned_cols=35 Identities=31% Similarity=0.277 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+.++|..++..+|.+.
T Consensus 27 ~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 27 NSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 46899999999999999999999999998887653
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=94.34 E-value=0.57 Score=42.95 Aligned_cols=95 Identities=17% Similarity=0.095 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-CCEEe--CCCCC-----CchHHHHHHhhcCCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-VTEFV--NPKDH-----DKPIQQVLVDLTDGG 264 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g-a~~~i--~~~~~-----~~~~~~~v~~~~~gg 264 (291)
...++|||+|+|. |..+..+++..+..+|++++.+++-.++++++. ....- ...+. -.+..+.+.. ..+.
T Consensus 149 ~~PkrVLIIGgGd-G~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~-~~~~ 226 (374)
T PRK01581 149 IDPKRVLILGGGD-GLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRVNVHVCDAKEFLSS-PSSL 226 (374)
T ss_pred CCCCEEEEECCCH-HHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCceEEEECcHHHHHHh-cCCC
Confidence 3457999999764 667778887766679999999999999998631 00000 00000 0123344443 3347
Q ss_pred ccEEEEcCCC-----------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN-----------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~-----------~~~~~~~~~~l~~~g 289 (291)
||+||--... ...+..+.+.|+++|
T Consensus 227 YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgG 262 (374)
T PRK01581 227 YDVIIIDFPDPATELLSTLYTSELFARIATFLTEDG 262 (374)
T ss_pred ccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCc
Confidence 9977654332 235778888899984
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.32 E-value=0.46 Score=39.84 Aligned_cols=75 Identities=13% Similarity=0.123 Sum_probs=45.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.++||+|+ |.+|...+..+... + +|++++++.++.+.+.+ +..-+++..+-. ..++.+.+... +++|.||.+.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~~a 79 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL--GRLDVLVHNA 79 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 57999987 99998887766655 6 89999998877654442 211122222211 12222222221 2699999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 80 g~ 81 (227)
T PRK08219 80 GV 81 (227)
T ss_pred Cc
Confidence 74
|
|
| >COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.31 E-value=1 Score=40.14 Aligned_cols=61 Identities=20% Similarity=0.310 Sum_probs=44.9
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCCEEeCCC
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~--~~~~~~~~~~~~ga~~~i~~~ 247 (291)
.....++||.+|+=--+|..|...+.+|+++|++-+++++ .+.+|+++++.+|+..+....
T Consensus 54 e~~G~l~pG~tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3556689999554444599999999999999995555543 456889999999996554433
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=94.30 E-value=0.26 Score=38.40 Aligned_cols=35 Identities=29% Similarity=0.416 Sum_probs=29.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|...+..+...|..+++.+|...
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcc
Confidence 46899999999999999999899998998887643
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PLN02823 spermine synthase | Back alignment and domain information |
|---|
Probab=94.28 E-value=0.33 Score=44.20 Aligned_cols=94 Identities=16% Similarity=0.091 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-CE-EeCCCC---CCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TE-FVNPKD---HDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-~~-~i~~~~---~~~~~~~~v~~~~~gg~d~v 268 (291)
..++|||+|+|. |..+..+++..+..+|++++.+++-.++++++-. .. ...... ...+..+.+.+ ..+.+|+|
T Consensus 103 ~pk~VLiiGgG~-G~~~re~l~~~~~~~v~~VEiD~~vv~lar~~~~~~~~~~~dprv~v~~~Da~~~L~~-~~~~yDvI 180 (336)
T PLN02823 103 NPKTVFIMGGGE-GSTAREVLRHKTVEKVVMCDIDQEVVDFCRKHLTVNREAFCDKRLELIINDARAELEK-RDEKFDVI 180 (336)
T ss_pred CCCEEEEECCCc-hHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhcccccccccCCceEEEEChhHHHHhh-CCCCccEE
Confidence 457899998865 6666778887777799999999999999987532 10 010000 00233344533 33489966
Q ss_pred EEcCC------------ChHHHH-HHHHHhhccC
Q 022865 269 FECIG------------NVSVMR-AALECCHKVS 289 (291)
Q Consensus 269 ~d~~g------------~~~~~~-~~~~~l~~~g 289 (291)
|-=+. +.+.++ .+.+.|+++|
T Consensus 181 i~D~~dp~~~~~~~~Lyt~eF~~~~~~~~L~p~G 214 (336)
T PLN02823 181 IGDLADPVEGGPCYQLYTKSFYERIVKPKLNPGG 214 (336)
T ss_pred EecCCCccccCcchhhccHHHHHHHHHHhcCCCc
Confidence 64321 123355 6778888884
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=94.27 E-value=0.21 Score=42.82 Aligned_cols=74 Identities=30% Similarity=0.312 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEe--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ |.+|...+..+...|+ +|+.++++. ....+.. ..+ |..+ ...+.+.+.+.. .+.+|+
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~-~v~~~~~~~-----~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~~id~ 79 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGA-KVIGFDQAF-----LTQEDYPFATFVLDVSD-AAAVAQVCQRLLAETGPLDV 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEecch-----hhhcCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCCE
Confidence 4678999988 9999999988888898 888887765 1122221 122 2222 233444443322 236999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 80 vi~~ag~ 86 (252)
T PRK08220 80 LVNAAGI 86 (252)
T ss_pred EEECCCc
Confidence 9999885
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.24 E-value=0.35 Score=43.24 Aligned_cols=79 Identities=22% Similarity=0.286 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HH---HhcCCCEE-e--CCCCCCchHHHHHHhhc-CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD-RA---KNFGVTEF-V--NPKDHDKPIQQVLVDLT-DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~-~~---~~~ga~~~-i--~~~~~~~~~~~~v~~~~-~g 263 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++.+ ++.+ .+ ++.|.... + |..+ .+...+.+.... .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga-~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d-~~~~~~~~~~~~~~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQ-RATADELVATAVGLG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHHHHHHhC
Confidence 4678999987 9999998888888899 788877643 2322 22 23343222 2 2211 122222222211 35
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.26 Score=43.79 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=48.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ +++|...++.+...|+ +|+.+.++. ++.+.+ ++.+... .+ |..+ .+++.+.+.+..
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~-~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 125 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSD-EKFARSLVHEAHKA 125 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 5678999988 9999999988888899 788775432 222222 2333322 22 2222 233444444432
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 126 ~g~id~lv~~Ag~ 138 (294)
T PRK07985 126 LGGLDIMALVAGK 138 (294)
T ss_pred hCCCCEEEECCCC
Confidence 2479999998874
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.16 Score=44.29 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=50.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC-CCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~-gg~d~v~d~~g~ 274 (291)
+|||+|+.+-|...+..+...|. +|+++.+++...+.+.+.|...++.-..+..+ +.++.. .++|+|+|++-.
T Consensus 2 ~ILvlGGT~egr~la~~L~~~g~-~v~~s~~t~~~~~~~~~~g~~~v~~g~l~~~~----l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVDSRAIAKGLIAQGI-EILVTVTTSEGKHLYPIHQALTVHTGALDPQE----LREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHHHHHHHHHHHhCCC-eEEEEEccCCccccccccCCceEEECCCCHHH----HHHHHHhcCCCEEEEcCCH
Confidence 68999884459888877777898 88888888887777777665555433222222 333333 379999999764
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.4 Score=42.57 Aligned_cols=84 Identities=18% Similarity=0.205 Sum_probs=53.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC---CchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH---DKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~---~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|+|+|+|.+|...+..+...|. .|+.+++++++.+..++.|... . +.. .........+. ..+|+||-++.
T Consensus 2 ~I~IiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~g~~~--~-~~~~~~~~~~~~~~~~~--~~~d~vila~k 75 (304)
T PRK06522 2 KIAILGAGAIGGLFGAALAQAGH-DVTLVARRGAHLDALNENGLRL--E-DGEITVPVLAADDPAEL--GPQDLVILAVK 75 (304)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECChHHHHHHHHcCCcc--c-CCceeecccCCCChhHc--CCCCEEEEecc
Confidence 58999999999988887777887 8999988777777666655421 0 000 00000001111 36899999988
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
... ...+++.+++
T Consensus 76 ~~~-~~~~~~~l~~ 88 (304)
T PRK06522 76 AYQ-LPAALPSLAP 88 (304)
T ss_pred ccc-HHHHHHHHhh
Confidence 754 4555555543
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.17 E-value=0.33 Score=41.21 Aligned_cols=78 Identities=21% Similarity=0.249 Sum_probs=45.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCC-EEeCCCC-CCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVT-EFVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~-~~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.+++||+|+ |.+|...+..+...|+ +|+.+.+ +++..+.. .+.+.. ..+..+- +...+.+.+.+.. .++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGA-DVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 468999988 9999999998888999 6655444 44333222 222322 1221111 1233333333322 137
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|+||.+.|
T Consensus 85 id~vi~~ag 93 (249)
T PRK12825 85 IDILVNNAG 93 (249)
T ss_pred CCEEEECCc
Confidence 999999987
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.16 E-value=0.33 Score=42.63 Aligned_cols=81 Identities=21% Similarity=0.265 Sum_probs=46.6
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|.|+|.|.+|...++..... +. .+.++-..+.+.+. ...++.. +..+. + +.++ ...+|+|++|++.
T Consensus 3 rVgIiG~G~iG~~~~~~l~~~~~~-~l~~v~~~~~~~~~~~~~~~~~-~~~~~----d----~~~l-~~~~DvVve~t~~ 71 (265)
T PRK13303 3 KVAMIGFGAIGAAVLELLEHDPDL-RVDWVIVPEHSIDAVRRALGEA-VRVVS----S----VDAL-PQRPDLVVECAGH 71 (265)
T ss_pred EEEEECCCHHHHHHHHHHhhCCCc-eEEEEEEcCCCHHHHhhhhccC-CeeeC----C----HHHh-ccCCCEEEECCCH
Confidence 688999999999877766655 44 44443222222222 2223211 11111 1 1222 2368999999998
Q ss_pred hHHHHHHHHHhhcc
Q 022865 275 VSVMRAALECCHKV 288 (291)
Q Consensus 275 ~~~~~~~~~~l~~~ 288 (291)
....+.+.++|+.|
T Consensus 72 ~~~~e~~~~aL~aG 85 (265)
T PRK13303 72 AALKEHVVPILKAG 85 (265)
T ss_pred HHHHHHHHHHHHcC
Confidence 87777888877654
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.54 Score=43.39 Aligned_cols=92 Identities=15% Similarity=0.239 Sum_probs=60.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEc--CChhh-HHHHHhcCCCEEeCCCCCC-chH--------------H
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGID--IDPKK-FDRAKNFGVTEFVNPKDHD-KPI--------------Q 254 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~--~~~~~-~~~~~~~ga~~~i~~~~~~-~~~--------------~ 254 (291)
++|.|+|+ |.+|..++.+.+.. .+ +|+++. ++.++ .+.+++|+...+...+... ..+ .
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f-~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRF-RVVALSAGKNVELLAEQAREFRPKYVVVADEEAAKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCcccc-EEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHHHHHHHHhhccCCceEEECh
Confidence 57899997 99999999988766 46 777764 44444 3555788887765544210 011 1
Q ss_pred HHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.++... .+|+|++++++...+...+.+++.|
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aG 115 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAG 115 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCC
Confidence 123333333 6899999988876678888887654
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.15 E-value=0.34 Score=41.90 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...++.+...|+ +|+.+.++ +++.+.+ ++.+... .+ |..+ ..+..+.+.... .
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~-~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~i~~~~~~~~~~~ 83 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKA-KVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTV-ESDVVNLIQTAVKEF 83 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5689999987 9999999998889998 67666553 3332222 2233321 22 3322 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 84 g~id~lv~~ag~ 95 (261)
T PRK08936 84 GTLDVMINNAGI 95 (261)
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.13 E-value=0.28 Score=42.00 Aligned_cols=77 Identities=19% Similarity=0.153 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++||.|+ |.+|...++.+...|+ +|+.+ .+++++++.. ++.+... .+ |.. +..++.+.+.+.. .++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGW-SVGINYARDAAAAEETADAVRAAGGRACVVAGDVA-NEADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccC-CHHHHHHHHHHHHHhcCC
Confidence 47899987 9999998888888898 66654 4555544322 2233222 22 222 1233444444332 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 9999999873
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=94.11 E-value=0.31 Score=43.07 Aligned_cols=43 Identities=23% Similarity=0.439 Sum_probs=36.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..++..|. +|+++++++++++.+.+.|.
T Consensus 2 ~I~IIG~G~mG~sla~~L~~~g~-~V~~~d~~~~~~~~a~~~g~ 44 (279)
T PRK07417 2 KIGIVGLGLIGGSLGLDLRSLGH-TVYGVSRRESTCERAIERGL 44 (279)
T ss_pred eEEEEeecHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCC
Confidence 58899999999888888778888 89999999998888877664
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.09 E-value=0.58 Score=43.19 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=31.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
.+.+|+|+|+|++|..++..+-++|..+++.+|.+
T Consensus 175 ~~~~VaIVG~GG~GS~Va~~LAR~GVgeI~LVD~D 209 (393)
T PRK06153 175 EGQRIAIIGLGGTGSYILDLVAKTPVREIHLFDGD 209 (393)
T ss_pred hhCcEEEEcCCccHHHHHHHHHHcCCCEEEEECCC
Confidence 45789999999999999999999999899988765
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.34 Score=41.22 Aligned_cols=78 Identities=22% Similarity=0.266 Sum_probs=46.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcC---CCE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFG---VTE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~g---a~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+++||+|+ |.+|...++.+...|+ +|+.++++++ ..++...+. ... .+..+- +..++.+.+.... .+.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~-~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGY-RVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899987 9999998888878898 8888877743 222222222 111 222221 1223333333322 2369
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 82 d~vi~~ag~ 90 (245)
T PRK12824 82 DILVNNAGI 90 (245)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=94.06 E-value=0.4 Score=42.55 Aligned_cols=43 Identities=26% Similarity=0.336 Sum_probs=36.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 1 ~IgvIG~G~mG~~iA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 43 (291)
T TIGR01505 1 KVGFIGLGIMGSPMSINLAKAGY-QLHVTTIGPEVADELLAAGA 43 (291)
T ss_pred CEEEEEecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 37788999999988777778898 89999999998888776664
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.36 Score=41.68 Aligned_cols=79 Identities=14% Similarity=0.122 Sum_probs=47.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ |.+|...++.+...|+ +|+.+.+ ++++.+.+ .+ .+... .+ |..+ ..++.+.+.+.. .
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~~ 85 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGF-DVAVHYNRSRDEAEALAAEIRALGRRAVALQADLAD-EAEVRALVARASAAL 85 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4568999988 9999998888888898 6766544 34443322 22 23321 12 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|.+.|.
T Consensus 86 ~~iD~vi~~ag~ 97 (258)
T PRK09134 86 GPITLLVNNASL 97 (258)
T ss_pred CCCCEEEECCcC
Confidence 479999999874
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=94.03 E-value=0.51 Score=44.51 Aligned_cols=75 Identities=21% Similarity=0.319 Sum_probs=53.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|+|+|.|.+|...++.+...|. .|++++.++++.+.+++ ++...+. -+. .-...+.+..-.++|.|+-++++.
T Consensus 2 ~viIiG~G~ig~~~a~~L~~~g~-~v~vid~~~~~~~~~~~~~~~~~~~-gd~---~~~~~l~~~~~~~a~~vi~~~~~~ 76 (453)
T PRK09496 2 KIIIVGAGQVGYTLAENLSGENN-DVTVIDTDEERLRRLQDRLDVRTVV-GNG---SSPDVLREAGAEDADLLIAVTDSD 76 (453)
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhhcCEEEEE-eCC---CCHHHHHHcCCCcCCEEEEecCCh
Confidence 58899999999999999999998 89999999998887765 5543322 211 112234443223799999998875
Q ss_pred H
Q 022865 276 S 276 (291)
Q Consensus 276 ~ 276 (291)
.
T Consensus 77 ~ 77 (453)
T PRK09496 77 E 77 (453)
T ss_pred H
Confidence 4
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=94.00 E-value=0.68 Score=38.75 Aligned_cols=34 Identities=24% Similarity=0.396 Sum_probs=30.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|...+..+-..|.++++.+|.+
T Consensus 19 ~s~VlviG~gglGsevak~L~~~GVg~i~lvD~d 52 (198)
T cd01485 19 SAKVLIIGAGALGAEIAKNLVLAGIDSITIVDHR 52 (198)
T ss_pred hCcEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3689999999999999999999999999888755
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.94 E-value=0.27 Score=43.70 Aligned_cols=39 Identities=23% Similarity=0.405 Sum_probs=34.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
++|.|+|+|.+|...++.+...|. +|+.++.++++++.+
T Consensus 4 ~~I~ViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~ 42 (291)
T PRK06035 4 KVIGVVGSGVMGQGIAQVFARTGY-DVTIVDVSEEILKNA 42 (291)
T ss_pred cEEEEECccHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHH
Confidence 579999999999998888888898 899999999887654
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.92 E-value=0.15 Score=45.33 Aligned_cols=39 Identities=26% Similarity=0.352 Sum_probs=33.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+|.|+|+|.+|...++.+...|+ .|+..+.+++.++.+
T Consensus 6 ~~V~ViGaG~mG~~iA~~~a~~G~-~V~l~d~~~~~~~~~ 44 (286)
T PRK07819 6 QRVGVVGAGQMGAGIAEVCARAGV-DVLVFETTEELATAG 44 (286)
T ss_pred cEEEEEcccHHHHHHHHHHHhCCC-EEEEEECCHHHHHHH
Confidence 479999999999888877778899 999999999987763
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.33 Score=44.85 Aligned_cols=81 Identities=26% Similarity=0.281 Sum_probs=47.2
Q ss_pred CCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChh--h--------------HHHHHhcCCCE-EeCCCCC-Cc
Q 022865 193 EPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDPK--K--------------FDRAKNFGVTE-FVNPKDH-DK 251 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~--ai~~a~~~g~~~v~~~~~~~~--~--------------~~~~~~~ga~~-~i~~~~~-~~ 251 (291)
..++++||+|+ +++|++ .++.+ ..|+ +++++....+ + .+++++.|... .+..+-. ++
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA-~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGA-DTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCC-eEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44678999987 899998 45555 7898 7777753221 1 23445566532 2322221 22
Q ss_pred hHHHHHHhhc--CCCccEEEEcCCCh
Q 022865 252 PIQQVLVDLT--DGGVDYSFECIGNV 275 (291)
Q Consensus 252 ~~~~~v~~~~--~gg~d~v~d~~g~~ 275 (291)
...+.+.... .|++|+++++++.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 3333333322 24799999998864
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.89 E-value=0.41 Score=40.86 Aligned_cols=80 Identities=18% Similarity=0.175 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhcC--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLTD--G 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~~--g 263 (291)
++++++|+|+ |.+|...+..+...|+ +|+++.+ ++++.+.. ++.+.+. .+..+- +...+.+.+.+... +
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGA-KVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3679999987 9999998888878898 6766533 33433222 2233322 222221 12333444443322 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+||.+.|.
T Consensus 84 ~id~vi~~ag~ 94 (247)
T PRK12935 84 KVDILVNNAGI 94 (247)
T ss_pred CCCEEEECCCC
Confidence 68999999885
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.22 Score=41.57 Aligned_cols=92 Identities=14% Similarity=0.159 Sum_probs=54.4
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcC
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.......++.+||-+|+|. |..+..+++ .|. +|+++|.+++-++.+++. +.. +.... .++.. . .. .
T Consensus 23 ~~~~~~~~~~~vLDiGcG~-G~~a~~la~-~g~-~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~--~d~~~-~-~~-~ 92 (195)
T TIGR00477 23 REAVKTVAPCKTLDLGCGQ-GRNSLYLSL-AGY-DVRAWDHNPASIASVLDMKARENLP--LRTDA--YDINA-A-AL-N 92 (195)
T ss_pred HHHhccCCCCcEEEeCCCC-CHHHHHHHH-CCC-eEEEEECCHHHHHHHHHHHHHhCCC--ceeEe--ccchh-c-cc-c
Confidence 3344444567888888855 667777776 477 899999999877665432 222 11100 01100 0 11 2
Q ss_pred CCccEEEEcC-----CC---hHHHHHHHHHhhcc
Q 022865 263 GGVDYSFECI-----GN---VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~-----g~---~~~~~~~~~~l~~~ 288 (291)
+.+|+|+.+. .. +..+..+.+.|+++
T Consensus 93 ~~fD~I~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 126 (195)
T TIGR00477 93 EDYDFIFSTVVFMFLQAGRVPEIIANMQAHTRPG 126 (195)
T ss_pred CCCCEEEEecccccCCHHHHHHHHHHHHHHhCCC
Confidence 3699887642 11 35677788888988
|
Part of a tellurite-reducing operon tehA and tehB |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.41 Score=42.85 Aligned_cols=37 Identities=22% Similarity=0.173 Sum_probs=30.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+++|||+|+ |.+|...+..+...|+ +|+++.++.++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 41 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGY-TVKATVRDLTD 41 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 4679999987 9999998888888898 78877666554
|
|
| >PRK13984 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.36 Score=47.58 Aligned_cols=77 Identities=25% Similarity=0.249 Sum_probs=52.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh---------------------hhHHHHHhcCCCEEeCCCCC-
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP---------------------KKFDRAKNFGVTEFVNPKDH- 249 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~---------------------~~~~~~~~~ga~~~i~~~~~- 249 (291)
.+++++|+|+|+|+.|+.++..++.+|. +|++++..+ ...+.++++|.+..++..-.
T Consensus 280 ~~~~~~v~IIGaG~aGl~aA~~L~~~G~-~v~vie~~~~~gG~~~~~i~~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~ 358 (604)
T PRK13984 280 EKKNKKVAIVGSGPAGLSAAYFLATMGY-EVTVYESLSKPGGVMRYGIPSYRLPDEALDKDIAFIEALGVKIHLNTRVGK 358 (604)
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCceEeecCCcccCCHHHHHHHHHHHHHCCcEEECCCEeCC
Confidence 4568899999999999999999999999 788876543 12455677787544432211
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCC
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+... +.+. ..+|.||-++|.
T Consensus 359 ~~~~-~~~~----~~yD~vilAtGa 378 (604)
T PRK13984 359 DIPL-EELR----EKHDAVFLSTGF 378 (604)
T ss_pred cCCH-HHHH----hcCCEEEEEcCc
Confidence 1111 1121 269999999995
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.4 Score=41.02 Aligned_cols=78 Identities=17% Similarity=0.138 Sum_probs=46.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHh---hcCCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVD---LTDGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~---~~~gg~ 265 (291)
++++||+|+ |.+|...+..+...|+ +|+.+. +.+++.+.+ .+++... .+ |..+ ..++.+.+.+ ..+.++
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~-~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~i 82 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGA-RVVVNYHQSEDAAEALADELGDRAIALQADVTD-REQVQAMFATATEHFGKPI 82 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCC-HHHHHHHHHHHHHHhCCCC
Confidence 468999987 9999999988888898 676653 344444333 3343221 22 2222 2333333333 222249
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|.+.|.
T Consensus 83 d~li~~ag~ 91 (253)
T PRK08642 83 TTVVNNALA 91 (253)
T ss_pred eEEEECCCc
Confidence 999998763
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.82 E-value=0.34 Score=39.05 Aligned_cols=74 Identities=24% Similarity=0.314 Sum_probs=49.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC----CchHHHHHHhhcCC-CccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH----DKPIQQVLVDLTDG-GVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~----~~~~~~~v~~~~~g-g~d~v 268 (291)
..+|+|.|+ |.+|.++++.-|+.++ -|..+|-++... .-+..+++...+ ++...+.+.+...+ ++|.|
T Consensus 3 agrVivYGGkGALGSacv~~Fkanny-wV~siDl~eNe~-----Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNY-WVLSIDLSENEQ-----ADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCe-EEEEEeeccccc-----ccceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 357888888 9999999999999999 888887776532 112223332221 12334445555555 99999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|...|+
T Consensus 77 ~CVAGG 82 (236)
T KOG4022|consen 77 FCVAGG 82 (236)
T ss_pred EEeecc
Confidence 997764
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=93.79 E-value=0.33 Score=43.05 Aligned_cols=40 Identities=23% Similarity=0.368 Sum_probs=34.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
++|.|+|+|.+|...++.+...|. +|++.+.++++++.+.
T Consensus 2 ~~V~VIG~G~mG~~iA~~la~~G~-~V~~~d~~~~~~~~~~ 41 (288)
T PRK09260 2 EKLVVVGAGVMGRGIAYVFAVSGF-QTTLVDIKQEQLESAQ 41 (288)
T ss_pred cEEEEECccHHHHHHHHHHHhCCC-cEEEEeCCHHHHHHHH
Confidence 468999999999998888888898 8999999998877654
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.77 E-value=0.3 Score=48.41 Aligned_cols=78 Identities=26% Similarity=0.356 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++++|+|+ |++|...+..+...|+ +|+++++++++++.+. +.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGA-TVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTD-SAAVDHTVKDILAEHGH 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Confidence 578999987 9999998888888898 8999999887754432 223222 12 2222 233334444322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 9999999884
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.75 E-value=0.44 Score=40.73 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=45.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhH----HHHHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKF----DRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~----~~~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...+..+...|+ +++.+.+ +.++. +..++.+... .+ |..+ ..++...+.+.. .+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGS-LVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVST-REGCETLAKATIDRYG 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCC-HHHHHHHHHHHHHHcC
Confidence 578999987 9999998887778999 6655443 33322 2223333322 22 2222 223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|.||.+.|.
T Consensus 84 ~~d~vi~~ag~ 94 (252)
T PRK06077 84 VADILVNNAGL 94 (252)
T ss_pred CCCEEEECCCC
Confidence 79999999983
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.41 Score=40.76 Aligned_cols=77 Identities=16% Similarity=0.133 Sum_probs=47.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ |.+|...+..+...|+ +|++ ..+++++.+.. ++.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGY-TVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISD-ENQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCC-HHHHHHHHHHHHHhCCC
Confidence 47899988 9999999888888898 6765 45555543322 2233221 22 2222 233444444432 348
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|.+.|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 9999999884
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.4 Score=43.00 Aligned_cols=39 Identities=23% Similarity=0.256 Sum_probs=31.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
..++++||+|+ |.+|...+..+...|+ +|+++.++.++.
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~-~V~~~~r~~~~~ 42 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGY-TINATVRDPKDR 42 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEEcCCcch
Confidence 34689999987 9999999988888899 787776665543
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.48 Score=40.36 Aligned_cols=96 Identities=16% Similarity=0.126 Sum_probs=56.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEe-------CCCCCCch-HHHHHHhh-
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV-------NPKDHDKP-IQQVLVDL- 260 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i-------~~~~~~~~-~~~~v~~~- 260 (291)
...++.+||+.|+|. |.-++.+|. .|+ .|+++|.++..++.+ ++.+..... .+...... +...+.++
T Consensus 34 ~~~~~~rvL~~gCG~-G~da~~LA~-~G~-~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLCGK-SLDMLWLAE-QGH-EVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCCCC-hHhHHHHHh-CCC-eEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 445678999998866 777777774 799 899999999877765 233321100 00000000 00001111
Q ss_pred --cCCCccEEEEcCC--------ChHHHHHHHHHhhccC
Q 022865 261 --TDGGVDYSFECIG--------NVSVMRAALECCHKVS 289 (291)
Q Consensus 261 --~~gg~d~v~d~~g--------~~~~~~~~~~~l~~~g 289 (291)
..+.||.|+|.+- .+..++...++|+++|
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG 149 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGC 149 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCC
Confidence 1136899999653 2344788888899983
|
|
| >TIGR00417 speE spermidine synthase | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.53 Score=41.43 Aligned_cols=94 Identities=17% Similarity=0.099 Sum_probs=55.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC--EEeCCCC---CCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKD---HDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~--~~i~~~~---~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++||++|+|. |..+..+++.....++++++.+++-.+.++++-.. ..++... ...+..+.+.+. .+.+|+|
T Consensus 72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~-~~~yDvI 149 (270)
T TIGR00417 72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADT-ENTFDVI 149 (270)
T ss_pred CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhC-CCCccEE
Confidence 446999998866 55566677766566899999999887877764110 0000000 001223334332 3479977
Q ss_pred EEcCC----------ChHHHHHHHHHhhccC
Q 022865 269 FECIG----------NVSVMRAALECCHKVS 289 (291)
Q Consensus 269 ~d~~g----------~~~~~~~~~~~l~~~g 289 (291)
+--.. ....++.+.+.|+++|
T Consensus 150 i~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG 180 (270)
T TIGR00417 150 IVDSTDPVGPAETLFTKEFYELLKKALNEDG 180 (270)
T ss_pred EEeCCCCCCcccchhHHHHHHHHHHHhCCCc
Confidence 65322 2344678888899883
|
the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM. |
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.38 Score=42.69 Aligned_cols=54 Identities=17% Similarity=0.070 Sum_probs=39.6
Q ss_pred CCCCEEEEEcCCh-HHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 193 EPGSIVAVFGLGT-VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 193 ~~g~~vlI~G~g~-vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
-.|++++|+|.|. +|...++++...|+ +|+...+..+.++..- -.+|.+++...
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~ga-tVtv~~~~t~~L~~~~-~~aDIvI~AtG 211 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANA-TVTICHSRTQNLPELV-KQADIIVGAVG 211 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCC-EEEEEeCCchhHHHHh-ccCCEEEEccC
Confidence 4788999999976 99999999999999 8888866443332211 24677776653
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.44 Score=45.00 Aligned_cols=71 Identities=30% Similarity=0.366 Sum_probs=48.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-hhH----HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-KKF----DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~----~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++++|+|+|.+|+.++..+...|+ .|++++..+ +.. +.+.+.|.. ++..+. .+ +. -+++|+|
T Consensus 4 ~~k~v~iiG~g~~G~~~A~~l~~~G~-~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~--~~------~~-~~~~d~v 72 (450)
T PRK14106 4 KGKKVLVVGAGVSGLALAKFLKKLGA-KVILTDEKEEDQLKEALEELGELGIE-LVLGEY--PE------EF-LEGVDLV 72 (450)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCc--ch------hH-hhcCCEE
Confidence 46889999999999999999999999 899998875 222 233445543 222221 11 11 1368999
Q ss_pred EEcCCCh
Q 022865 269 FECIGNV 275 (291)
Q Consensus 269 ~d~~g~~ 275 (291)
+.++|..
T Consensus 73 v~~~g~~ 79 (450)
T PRK14106 73 VVSPGVP 79 (450)
T ss_pred EECCCCC
Confidence 9998853
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=93.52 E-value=0.46 Score=44.80 Aligned_cols=71 Identities=24% Similarity=0.226 Sum_probs=46.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~----~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
.+++++|+|.|.+|.+++.+++..|+ +|++.+..+.. .+.+++.|......... .+. + ..++|+|+
T Consensus 4 ~~k~v~v~G~g~~G~s~a~~l~~~G~-~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~~~--~~~---~----~~~~d~vV 73 (447)
T PRK02472 4 QNKKVLVLGLAKSGYAAAKLLHKLGA-NVTVNDGKPFSENPEAQELLEEGIKVICGSHP--LEL---L----DEDFDLMV 73 (447)
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEcCCCccchhHHHHHHhcCCEEEeCCCC--HHH---h----cCcCCEEE
Confidence 36789999998899999999999999 89998865422 23344556533221111 111 1 11489999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+.|-
T Consensus 74 ~s~gi 78 (447)
T PRK02472 74 KNPGI 78 (447)
T ss_pred ECCCC
Confidence 88764
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.48 Score=40.66 Aligned_cols=78 Identities=18% Similarity=0.260 Sum_probs=46.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH-Hhc---CCCE-Ee--CCCCCCchHHHHHHhhc----
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA-KNF---GVTE-FV--NPKDHDKPIQQVLVDLT---- 261 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~-~~~---ga~~-~i--~~~~~~~~~~~~v~~~~---- 261 (291)
+.+++|+|+ |.+|...+..+...|+ +|+. ..++.++.+.. .++ +... .+ |..+ ..++.+.+.+..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~i~~~~~~~~~~~~ 83 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGA-LVAIHYGRNKQAADETIREIESNGGKAFLIEADLNS-IDGVKKLVEQLKNELQ 83 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCC-HHHHHHHHHHHHHHhc
Confidence 578999987 9999999888878898 6655 45666554322 222 2221 22 2222 233333333321
Q ss_pred ---C-CCccEEEEcCCC
Q 022865 262 ---D-GGVDYSFECIGN 274 (291)
Q Consensus 262 ---~-gg~d~v~d~~g~ 274 (291)
. +++|++|.+.|.
T Consensus 84 ~~~~~~~id~vi~~ag~ 100 (254)
T PRK12746 84 IRVGTSEIDILVNNAGI 100 (254)
T ss_pred cccCCCCccEEEECCCC
Confidence 1 369999999874
|
|
| >PRK12814 putative NADPH-dependent glutamate synthase small subunit; Provisional | Back alignment and domain information |
|---|
Probab=93.50 E-value=0.42 Score=47.56 Aligned_cols=77 Identities=22% Similarity=0.248 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh---------------------hHHHHHhcCCCEEeCCCCC-C
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK---------------------KFDRAKNFGVTEFVNPKDH-D 250 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~---------------------~~~~~~~~ga~~~i~~~~~-~ 250 (291)
..+++|+|+|+|+.|+.++..+..+|+ +|++++..+. ..+.++++|.+...+.... +
T Consensus 191 ~~~k~VaIIGaGpAGl~aA~~La~~G~-~Vtv~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~Gv~i~~~~~v~~d 269 (652)
T PRK12814 191 KSGKKVAIIGAGPAGLTAAYYLLRKGH-DVTIFDANEQAGGMMRYGIPRFRLPESVIDADIAPLRAMGAEFRFNTVFGRD 269 (652)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCceeeecCCCCCCCHHHHHHHHHHHHHcCCEEEeCCcccCc
Confidence 456899999999999999999999999 7888876543 1344566776544433210 0
Q ss_pred chHHHHHHhhcCCCccEEEEcCCCh
Q 022865 251 KPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 251 ~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
... +.+. ..+|.||-++|..
T Consensus 270 v~~-~~~~----~~~DaVilAtGa~ 289 (652)
T PRK12814 270 ITL-EELQ----KEFDAVLLAVGAQ 289 (652)
T ss_pred cCH-HHHH----hhcCEEEEEcCCC
Confidence 111 1111 1489999988864
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=93.48 E-value=0.69 Score=41.01 Aligned_cols=44 Identities=30% Similarity=0.385 Sum_probs=38.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVT 241 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~ 241 (291)
+|.++|.|..|.-.++=+...|+ .+++.+++++| .+++++.|+.
T Consensus 2 kIafIGLG~MG~pmA~~L~~aG~-~v~v~~r~~~ka~~~~~~~Ga~ 46 (286)
T COG2084 2 KIAFIGLGIMGSPMAANLLKAGH-EVTVYNRTPEKAAELLAAAGAT 46 (286)
T ss_pred eEEEEcCchhhHHHHHHHHHCCC-EEEEEeCChhhhhHHHHHcCCc
Confidence 57888999999988888888999 99999999999 8888887774
|
|
| >PRK14103 trans-aconitate 2-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.46 E-value=0.86 Score=39.55 Aligned_cols=91 Identities=16% Similarity=0.141 Sum_probs=61.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc-CC
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DG 263 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~-~g 263 (291)
+.......++++||=+|+|. |..+..+++.. +. +|+++|.+++-++.+++.+.+ ++.. +. .++. .+
T Consensus 21 ll~~l~~~~~~~vLDlGcG~-G~~~~~l~~~~p~~-~v~gvD~s~~~~~~a~~~~~~-~~~~-----d~----~~~~~~~ 88 (255)
T PRK14103 21 LLARVGAERARRVVDLGCGP-GNLTRYLARRWPGA-VIEALDSSPEMVAAARERGVD-ARTG-----DV----RDWKPKP 88 (255)
T ss_pred HHHhCCCCCCCEEEEEcCCC-CHHHHHHHHHCCCC-EEEEEECCHHHHHHHHhcCCc-EEEc-----Ch----hhCCCCC
Confidence 34555667888998898866 77777888776 45 899999999988888775543 2221 11 1111 23
Q ss_pred CccEEEEcCC-----C-hHHHHHHHHHhhcc
Q 022865 264 GVDYSFECIG-----N-VSVMRAALECCHKV 288 (291)
Q Consensus 264 g~d~v~d~~g-----~-~~~~~~~~~~l~~~ 288 (291)
.||+|+-... . ...++.+.+.|+++
T Consensus 89 ~fD~v~~~~~l~~~~d~~~~l~~~~~~Lkpg 119 (255)
T PRK14103 89 DTDVVVSNAALQWVPEHADLLVRWVDELAPG 119 (255)
T ss_pred CceEEEEehhhhhCCCHHHHHHHHHHhCCCC
Confidence 7998887432 2 45577788888888
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.44 E-value=0.68 Score=39.71 Aligned_cols=38 Identities=24% Similarity=0.198 Sum_probs=29.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKF 232 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~ 232 (291)
.++++||+|+ +.+|...++.+...|+ +|+.+. +.+++.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~-~v~~~~~~~~~~~ 42 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGA-LVAIHYGNRKEEA 42 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcCCCHHHH
Confidence 4678999987 9999999998888998 777653 444443
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.42 E-value=0.49 Score=39.95 Aligned_cols=73 Identities=21% Similarity=0.261 Sum_probs=45.9
Q ss_pred EEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--CCC-EEeCCCC-CCchHHHHHHhhcCCCccEEEEcC
Q 022865 199 AVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--GVT-EFVNPKD-HDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 199 lI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--ga~-~~i~~~~-~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
||+|+ |.+|...++.+...|+ +|+++++++++.+... ++ +.. +.+..+- +..++.+.+.+. +++|.+|++.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGA-RVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECC
Confidence 57787 9999998888888899 8999988877655432 22 221 2222221 123333333332 4689999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 78 g~ 79 (230)
T PRK07041 78 AD 79 (230)
T ss_pred CC
Confidence 74
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=93.41 E-value=0.45 Score=39.08 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=46.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHHHhcCCCEEeC-CC-CCCchHHHHHHhhcC--CC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAKNFGVTEFVN-PK-DHDKPIQQVLVDLTD--GG 264 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-------~~~~~~~~~ga~~~i~-~~-~~~~~~~~~v~~~~~--gg 264 (291)
++||+|+ |++|+..++.+...+..+++.+.++. +..+.+++.|+...+. .+ .+.+++.+.+.++.. +.
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 6789976 99999999888888887999998882 2334445566643221 11 122344555555432 37
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
++.||.+.|.
T Consensus 82 i~gVih~ag~ 91 (181)
T PF08659_consen 82 IDGVIHAAGV 91 (181)
T ss_dssp EEEEEE----
T ss_pred cceeeeeeee
Confidence 8999999875
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.59 Score=43.35 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=36.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.++.....+..+.++
T Consensus 191 ~gktVGIvG~G~IG~~vA~~l~~fG~-~V~~~dr~~~~~~~~~~~g 235 (385)
T PRK07574 191 EGMTVGIVGAGRIGLAVLRRLKPFDV-KLHYTDRHRLPEEVEQELG 235 (385)
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEECCCCCchhhHhhcC
Confidence 46789999999999999999999999 9999988764333333444
|
|
| >PRK05708 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.36 E-value=0.36 Score=43.28 Aligned_cols=87 Identities=15% Similarity=0.088 Sum_probs=51.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-CCCEEeCCCCCCchHHH-HHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-GVTEFVNPKDHDKPIQQ-VLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-ga~~~i~~~~~~~~~~~-~v~~~~~gg~d~v~d~~g~ 274 (291)
+|+|+|+|++|....-.+...|. .|+.+++..++++..++- |.. +..... ...+.- .......+.+|+||-|+=.
T Consensus 4 ~I~IiGaGaiG~~~a~~L~~~G~-~V~lv~r~~~~~~~i~~~~Gl~-i~~~g~-~~~~~~~~~~~~~~~~~D~viv~vK~ 80 (305)
T PRK05708 4 TWHILGAGSLGSLWACRLARAGL-PVRLILRDRQRLAAYQQAGGLT-LVEQGQ-ASLYAIPAETADAAEPIHRLLLACKA 80 (305)
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CeEEEEechHHHHHHhhcCCeE-EeeCCc-ceeeccCCCCcccccccCEEEEECCH
Confidence 69999999999876666667788 788888887777766543 331 111111 000000 0000011368999999887
Q ss_pred hHHHHHHHHHhhc
Q 022865 275 VSVMRAALECCHK 287 (291)
Q Consensus 275 ~~~~~~~~~~l~~ 287 (291)
-+ ...+++.+++
T Consensus 81 ~~-~~~al~~l~~ 92 (305)
T PRK05708 81 YD-AEPAVASLAH 92 (305)
T ss_pred Hh-HHHHHHHHHh
Confidence 55 4455555543
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=93.35 E-value=0.48 Score=38.57 Aligned_cols=80 Identities=28% Similarity=0.376 Sum_probs=56.3
Q ss_pred CCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCC--CCchHHHHHHhhcCC--CccE
Q 022865 194 PGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKD--HDKPIQQVLVDLTDG--GVDY 267 (291)
Q Consensus 194 ~g~~vlI~G-~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~--~~~~~~~~v~~~~~g--g~d~ 267 (291)
++-..||.| ++++|.+++.-+...|+ .++..|-... ..+.++++|...++...+ .+.+....+...... ..|+
T Consensus 8 kglvalvtggasglg~ataerlakqga-sv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGA-SVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCc-eEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 445667875 49999999998888999 6666665554 467778999876664433 234555555554433 7899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
.+||.|-
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999985
|
|
| >COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.38 Score=43.21 Aligned_cols=88 Identities=15% Similarity=0.174 Sum_probs=52.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
+|+|+|+|++|.+..-.+...| ..|+.+.+++. .+..++-|....-..................+.+|+||-++-.-+
T Consensus 2 kI~IlGaGAvG~l~g~~L~~~g-~~V~~~~R~~~-~~~l~~~GL~i~~~~~~~~~~~~~~~~~~~~~~~Dlviv~vKa~q 79 (307)
T COG1893 2 KILILGAGAIGSLLGARLAKAG-HDVTLLVRSRR-LEALKKKGLRIEDEGGNFTTPVVAATDAEALGPADLVIVTVKAYQ 79 (307)
T ss_pred eEEEECCcHHHHHHHHHHHhCC-CeEEEEecHHH-HHHHHhCCeEEecCCCccccccccccChhhcCCCCEEEEEecccc
Confidence 6899999999988877777888 47877766665 666666664322111100000000111111127899999887755
Q ss_pred HHHHHHHHhhc
Q 022865 277 VMRAALECCHK 287 (291)
Q Consensus 277 ~~~~~~~~l~~ 287 (291)
...+++.+++
T Consensus 80 -~~~al~~l~~ 89 (307)
T COG1893 80 -LEEALPSLAP 89 (307)
T ss_pred -HHHHHHHhhh
Confidence 5666666554
|
|
| >cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.33 Score=41.29 Aligned_cols=46 Identities=33% Similarity=0.407 Sum_probs=37.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~----------~~~~~~~~~g 239 (291)
.+.+|+|.|-|.+|..+++++..+|++.|.+.|.+. +.++..++.+
T Consensus 22 ~g~~vaIqGfGnVG~~~a~~L~~~G~~vV~vsD~~g~i~~~Gld~~~l~~~~~~~~ 77 (217)
T cd05211 22 EGLTVAVQGLGNVGWGLAKKLAEEGGKVLAVSDPDGYIYDPGITTEELINYAVALG 77 (217)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEcCCCcEECCCCCHHHHHHHHHhhC
Confidence 578999999999999999999999985666677776 6666665554
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral |
| >PLN03013 cysteine synthase | Back alignment and domain information |
|---|
Probab=93.31 E-value=1.4 Score=41.38 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=41.8
Q ss_pred hhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCCEEe
Q 022865 188 NTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 188 ~~~~~~~g~~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~--~~~~~~~~~~~~ga~~~i 244 (291)
+...+.+|.+.+|. .+|..|.+.+.+++.+|++-+++++ .+++|++..+.+|++.++
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~ 226 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVL 226 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEE
Confidence 45556788665565 4599999999999999995444443 345788888999986553
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=93.29 E-value=1 Score=46.96 Aligned_cols=89 Identities=18% Similarity=0.164 Sum_probs=57.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHc-CCC------------eEEEEcCChhhHHHH-Hhc-CCCE-EeCCCCCCchHHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAA-GAS------------RVIGIDIDPKKFDRA-KNF-GVTE-FVNPKDHDKPIQQVL 257 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~-g~~------------~v~~~~~~~~~~~~~-~~~-ga~~-~i~~~~~~~~~~~~v 257 (291)
..++|+|+|+|.+|...+..+... ++. .|++.+.+.++.+.+ +.+ +++. .+|+.+ . +.+
T Consensus 568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D----~-e~L 642 (1042)
T PLN02819 568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSD----S-ESL 642 (1042)
T ss_pred cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCC----H-HHH
Confidence 356899999999999888877654 332 277777777665544 334 3322 233322 1 233
Q ss_pred HhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.. ++|+|+.|++.......+..|++.+
T Consensus 643 ~~~v~-~~DaVIsalP~~~H~~VAkaAieaG 672 (1042)
T PLN02819 643 LKYVS-QVDVVISLLPASCHAVVAKACIELK 672 (1042)
T ss_pred HHhhc-CCCEEEECCCchhhHHHHHHHHHcC
Confidence 33322 4999999999877777887777653
|
|
| >PLN02735 carbamoyl-phosphate synthase | Back alignment and domain information |
|---|
Probab=93.28 E-value=0.44 Score=50.22 Aligned_cols=99 Identities=14% Similarity=0.180 Sum_probs=58.1
Q ss_pred cchhhhhhhhhhcCCCCCCEEEEEcCChH-----------HHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTV-----------GLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 178 ~~~ta~~~~~~~~~~~~g~~vlI~G~g~v-----------G~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
...-+|.+......-..-++|||+|+|++ |..++..++.+|+ +|+.++.+++.......+ +|++...
T Consensus 6 ~~~~~~~~~~~~~~~~~~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLke~G~-~Vi~vd~np~t~~~~~~~-aD~~yi~ 83 (1102)
T PLN02735 6 TVTRAWSAATKAGKRTDLKKIMILGAGPIVIGQACEFDYSGTQACKALKEEGY-EVVLINSNPATIMTDPET-ADRTYIA 83 (1102)
T ss_pred cceecccccccCCcccCCCEEEEECCCccccccceeecchHHHHHHHHHHcCC-EEEEEeCCcccccCChhh-CcEEEeC
Confidence 34456665433333333468999999874 5568888889999 899998887532111122 4443321
Q ss_pred CCCCchHHHHHHhhcC-CCccEEEEcCCChHHHHHHH
Q 022865 247 KDHDKPIQQVLVDLTD-GGVDYSFECIGNVSVMRAAL 282 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~-gg~d~v~d~~g~~~~~~~~~ 282 (291)
.. +.+ .+.++.. .++|.|+-+.|+...+..+.
T Consensus 84 p~-~~e---~v~~ii~~e~~D~Iip~~gg~~gl~la~ 116 (1102)
T PLN02735 84 PM-TPE---LVEQVIAKERPDALLPTMGGQTALNLAV 116 (1102)
T ss_pred CC-CHH---HHHHHHHHhCCCEEEECCCchhhHHHHH
Confidence 11 122 2333222 37999999888765554444
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=93.26 E-value=0.98 Score=39.64 Aligned_cols=79 Identities=15% Similarity=0.216 Sum_probs=48.3
Q ss_pred EEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|.|+|.|.+|...++..... +.+.+.+++++.++.+.+ ++++.. .. .++.+.+ ..+|+|++|++
T Consensus 3 rIgIIG~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~~~~~-~~------~~~~ell-----~~~DvVvi~a~ 70 (265)
T PRK13304 3 KIGIVGCGAIASLITKAILSGRINAELYAFYDRNLEKAENLASKTGAK-AC------LSIDELV-----EDVDLVVECAS 70 (265)
T ss_pred EEEEECccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHhcCCe-eE------CCHHHHh-----cCCCEEEEcCC
Confidence 688999999998877665554 453455677777765544 344432 11 1222222 25788888887
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
.......+.++++.
T Consensus 71 ~~~~~~~~~~al~~ 84 (265)
T PRK13304 71 VNAVEEVVPKSLEN 84 (265)
T ss_pred hHHHHHHHHHHHHc
Confidence 76666666666653
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.61 Score=43.24 Aligned_cols=46 Identities=20% Similarity=0.224 Sum_probs=36.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++....+..++.|+
T Consensus 198 ~gktVGIVG~G~IG~~vA~~L~afG~-~V~~~d~~~~~~~~~~~~g~ 243 (386)
T PLN03139 198 EGKTVGTVGAGRIGRLLLQRLKPFNC-NLLYHDRLKMDPELEKETGA 243 (386)
T ss_pred CCCEEEEEeecHHHHHHHHHHHHCCC-EEEEECCCCcchhhHhhcCc
Confidence 57799999999999999999999999 89999877544444444443
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=93.24 E-value=0.2 Score=44.69 Aligned_cols=71 Identities=23% Similarity=0.171 Sum_probs=45.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+++|+|+ |.+|...++.+...|. +|+++++++++.....+.+.. .+..+-.+. +.+.++.. ++|+||++.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~---~~l~~~~~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGE-EVRVLVRPTSDRRNLEGLDVE-IVEGDLRDP---ASLRKAVA-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCC-EEEEEEecCccccccccCCce-EEEeeCCCH---HHHHHHHh-CCCEEEEece
Confidence 6899987 9999999998888898 899998877654333333332 222111111 22333222 5899999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=93.22 E-value=0.6 Score=42.92 Aligned_cols=42 Identities=19% Similarity=0.150 Sum_probs=33.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
..+++|||+|+ |.+|...+..+...|+ +|+++.++.++.+.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~-~V~~~~r~~~~~~~l 93 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGY-SVRIAVDTQEDKEKL 93 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 45789999987 9999999998888999 887766665554433
|
|
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.19 E-value=0.6 Score=41.34 Aligned_cols=45 Identities=33% Similarity=0.486 Sum_probs=36.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~-v~~~~~~~~~~~~~~~~ga 240 (291)
.+|+|+|.|.+|.+.+..++..|... |+..+.+.+.++.+.++|.
T Consensus 4 ~~v~IvG~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv 49 (279)
T COG0287 4 MKVGIVGLGLMGGSLARALKEAGLVVRIIGRDRSAATLKAALELGV 49 (279)
T ss_pred cEEEEECCchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHhhcCc
Confidence 57888899999999999999999743 5777777777777777775
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=93.17 E-value=0.51 Score=45.12 Aligned_cols=41 Identities=22% Similarity=0.256 Sum_probs=35.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
.+.+++|+|+|++|.+++..+...|+ +|+.++++.++.+.+
T Consensus 331 ~~k~vlIiGaGgiG~aia~~L~~~G~-~V~i~~R~~~~~~~l 371 (477)
T PRK09310 331 NNQHVAIVGAGGAAKAIATTLARAGA-ELLIFNRTKAHAEAL 371 (477)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 56789999999999999999999999 888888888776544
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.63 Score=39.72 Aligned_cols=78 Identities=17% Similarity=0.140 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHH----HHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDR----AKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~----~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...++.+...|+ +|+.+. +++++.+. +++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~-~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGY-AVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVAD-EADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC-eEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCC-HHHHHHHHHHHHHHhC
Confidence 457899987 9999998888878898 666654 34433322 22334322 22 2222 234444444332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (248)
T PRK06123 80 RLDALVNNAGI 90 (248)
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
|
| >PRK13403 ketol-acid reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=93.10 E-value=0.92 Score=40.94 Aligned_cols=71 Identities=23% Similarity=0.257 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-.+++|.|+|-|.+|...++.++..|. +|++.++.....+.+.+.|.. +. ++.+.+. ..|+|+-++
T Consensus 14 LkgKtVGIIG~GsIG~amA~nL~d~G~-~ViV~~r~~~s~~~A~~~G~~-v~-------sl~Eaak-----~ADVV~llL 79 (335)
T PRK13403 14 LQGKTVAVIGYGSQGHAQAQNLRDSGV-EVVVGVRPGKSFEVAKADGFE-VM-------SVSEAVR-----TAQVVQMLL 79 (335)
T ss_pred hCcCEEEEEeEcHHHHHHHHHHHHCcC-EEEEEECcchhhHHHHHcCCE-EC-------CHHHHHh-----cCCEEEEeC
Confidence 367899999999999999999999999 787776655555566666652 11 1222222 479999988
Q ss_pred CChHH
Q 022865 273 GNVSV 277 (291)
Q Consensus 273 g~~~~ 277 (291)
..+..
T Consensus 80 Pd~~t 84 (335)
T PRK13403 80 PDEQQ 84 (335)
T ss_pred CChHH
Confidence 86543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=93.09 E-value=0.55 Score=43.35 Aligned_cols=77 Identities=14% Similarity=0.172 Sum_probs=47.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCC------CEEeCCCCCCchHHHHHHhhcCC
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGV------TEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga------~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.-+..+|||+|+ |-+|...++.+... |. +|++++++.++.+.+...+. -+.+..+-.+. ..+.++..
T Consensus 11 ~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~-~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~---~~l~~~~~- 85 (386)
T PLN02427 11 PIKPLTICMIGAGGFIGSHLCEKLMTETPH-KVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD---SRLEGLIK- 85 (386)
T ss_pred cccCcEEEEECCcchHHHHHHHHHHhcCCC-EEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh---HHHHHHhh-
Confidence 334568999987 99999888888777 46 89999877666554433221 11221111111 22333322
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|+||.+++
T Consensus 86 ~~d~ViHlAa 95 (386)
T PLN02427 86 MADLTINLAA 95 (386)
T ss_pred cCCEEEEccc
Confidence 5899999986
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.22 Score=41.01 Aligned_cols=71 Identities=21% Similarity=0.258 Sum_probs=46.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.|.|+|+ |.+|...++-|+..|. .|+++.++++|....... .+.-.+- -+. ..+.+.. .|+|+||++.|..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGH-eVTAivRn~~K~~~~~~~----~i~q~Di-fd~-~~~a~~l-~g~DaVIsA~~~~ 73 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGH-EVTAIVRNASKLAARQGV----TILQKDI-FDL-TSLASDL-AGHDAVISAFGAG 73 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCC-eeEEEEeChHhccccccc----eeecccc-cCh-hhhHhhh-cCCceEEEeccCC
Confidence 4788888 9999999999999999 899999999987543211 1111110 011 1122211 2799999988753
|
|
| >PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=93.07 E-value=0.61 Score=47.06 Aligned_cols=80 Identities=23% Similarity=0.386 Sum_probs=54.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|.|+|.|.+|.+.++.++..|. .+|+++++++++++.++++|+.. ... .+..+.+ ..+|+||.|++.
T Consensus 4 ~~I~IIG~G~mG~ala~~l~~~G~~~~V~~~d~~~~~~~~a~~~g~~~---~~~--~~~~~~~-----~~aDvVilavp~ 73 (735)
T PRK14806 4 GRVVVIGLGLIGGSFAKALRERGLAREVVAVDRRAKSLELAVSLGVID---RGE--EDLAEAV-----SGADVIVLAVPV 73 (735)
T ss_pred cEEEEEeeCHHHHHHHHHHHhcCCCCEEEEEECChhHHHHHHHCCCCC---ccc--CCHHHHh-----cCCCEEEECCCH
Confidence 679999999999999999998883 37999999999988888877521 011 1121222 146777777775
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
. .+...++.++
T Consensus 74 ~-~~~~vl~~l~ 84 (735)
T PRK14806 74 L-AMEKVLADLK 84 (735)
T ss_pred H-HHHHHHHHHH
Confidence 3 3445444443
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.33 Score=37.64 Aligned_cols=78 Identities=22% Similarity=0.382 Sum_probs=42.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
-+|-|+|+|.+|......++..|+ .|..+- ++.++.+.+.+ ++...+.+..+ .. ..+|++|-++.
T Consensus 11 l~I~iIGaGrVG~~La~aL~~ag~-~v~~v~srs~~sa~~a~~~~~~~~~~~~~~-----------~~-~~aDlv~iavp 77 (127)
T PF10727_consen 11 LKIGIIGAGRVGTALARALARAGH-EVVGVYSRSPASAERAAAFIGAGAILDLEE-----------IL-RDADLVFIAVP 77 (127)
T ss_dssp -EEEEECTSCCCCHHHHHHHHTTS-EEEEESSCHH-HHHHHHC--TT-----TTG-----------GG-CC-SEEEE-S-
T ss_pred cEEEEECCCHHHHHHHHHHHHCCC-eEEEEEeCCccccccccccccccccccccc-----------cc-ccCCEEEEEec
Confidence 478999999999999999999998 788874 44445555543 33322222111 11 14666666666
Q ss_pred ChHHHHHHHHHhhc
Q 022865 274 NVSVMRAALECCHK 287 (291)
Q Consensus 274 ~~~~~~~~~~~l~~ 287 (291)
... +....+.|+.
T Consensus 78 Dda-I~~va~~La~ 90 (127)
T PF10727_consen 78 DDA-IAEVAEQLAQ 90 (127)
T ss_dssp CCH-HHHHHHHHHC
T ss_pred hHH-HHHHHHHHHH
Confidence 643 4444444443
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=93.06 E-value=0.41 Score=39.09 Aligned_cols=79 Identities=19% Similarity=0.158 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC--CccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g--g~d~v~d 270 (291)
.|..|++.|+ -++|...++-+...|+ +|+++.++++.+.-+.++-...++-..-+-..| +.+.+.... .+|..++
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA-~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~w-ea~~~~l~~v~pidgLVN 83 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGA-QVIAVARNEANLLSLVKETPSLIIPIVGDLSAW-EALFKLLVPVFPIDGLVN 83 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCC-EEEEEecCHHHHHHHHhhCCcceeeeEecccHH-HHHHHhhcccCchhhhhc
Confidence 5678999998 6899999999999999 999999999987766555433322111111223 233343332 5677777
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
..|.
T Consensus 84 NAgv 87 (245)
T KOG1207|consen 84 NAGV 87 (245)
T ss_pred cchh
Confidence 6663
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.69 Score=43.04 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=31.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+.++|..+++.+|.+.
T Consensus 38 ~~~VlivG~GGlG~~va~~La~~Gvg~l~lvD~D~ 72 (390)
T PRK07411 38 AASVLCIGTGGLGSPLLLYLAAAGIGRIGIVDFDV 72 (390)
T ss_pred cCcEEEECCCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 35899999999999999999999999999887653
|
|
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=93.03 E-value=0.89 Score=40.37 Aligned_cols=43 Identities=23% Similarity=0.383 Sum_probs=35.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 4 ~IgviG~G~mG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~g~ 46 (296)
T PRK11559 4 KVGFIGLGIMGKPMSKNLLKAGY-SLVVYDRNPEAVAEVIAAGA 46 (296)
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 68899999999887777777888 89999999888777766654
|
|
| >PRK04266 fibrillarin; Provisional | Back alignment and domain information |
|---|
Probab=93.03 E-value=1.2 Score=38.07 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=57.2
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC----CCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG----VTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g----a~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
+...++++++||=+|+|. |.....+++..+..+|+++|.+++.++.+.+.. .-..+..+...+. ....+ ..
T Consensus 66 ~~l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~---~~~~l-~~ 140 (226)
T PRK04266 66 KNFPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPE---RYAHV-VE 140 (226)
T ss_pred hhCCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcc---hhhhc-cc
Confidence 346788999988888755 556666777765348999999998766443221 1122211111110 00111 13
Q ss_pred CccEEEEcCCCh----HHHHHHHHHhhccCC
Q 022865 264 GVDYSFECIGNV----SVMRAALECCHKVSG 290 (291)
Q Consensus 264 g~d~v~d~~g~~----~~~~~~~~~l~~~gg 290 (291)
.+|+|+-....+ ..+..+.+.|+++ |
T Consensus 141 ~~D~i~~d~~~p~~~~~~L~~~~r~LKpG-G 170 (226)
T PRK04266 141 KVDVIYQDVAQPNQAEIAIDNAEFFLKDG-G 170 (226)
T ss_pred cCCEEEECCCChhHHHHHHHHHHHhcCCC-c
Confidence 599998654443 2367788889998 5
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=93.01 E-value=0.17 Score=42.70 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=61.3
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc---
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT--- 261 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~--- 261 (291)
.+....++||-+|.+. |+.++.+|+++. -.+|+.++.+++..+.+++ .|...-+.... .+..+.+.++.
T Consensus 41 ~~~~~~k~vLEIGt~~-GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~--gda~~~l~~l~~~~ 117 (205)
T PF01596_consen 41 VRLTRPKRVLEIGTFT-GYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIE--GDALEVLPELANDG 117 (205)
T ss_dssp HHHHT-SEEEEESTTT-SHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEE--S-HHHHHHHHHHTT
T ss_pred HHhcCCceEEEecccc-ccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEE--eccHhhHHHHHhcc
Confidence 3345567999998754 888999998874 2399999999999888854 45433222221 22334444433
Q ss_pred -CCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 262 -DGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 -~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||+||-=..- ...+..++++|+++|
T Consensus 118 ~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~gg 149 (205)
T PF01596_consen 118 EEGQFDFVFIDADKRNYLEYFEKALPLLRPGG 149 (205)
T ss_dssp TTTSEEEEEEESTGGGHHHHHHHHHHHEEEEE
T ss_pred CCCceeEEEEcccccchhhHHHHHhhhccCCe
Confidence 2369977654332 344777888888873
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.99 E-value=0.37 Score=42.87 Aligned_cols=86 Identities=22% Similarity=0.235 Sum_probs=51.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC--CchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~--~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|+|+|+|.+|.+.+..+...|. .|+.+++ +++.+..++.|........+. .........+. ...+|++|-|+..
T Consensus 2 kI~IiG~G~iG~~~a~~L~~~g~-~V~~~~r-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~vilavk~ 78 (305)
T PRK12921 2 RIAVVGAGAVGGTFGGRLLEAGR-DVTFLVR-PKRAKALRERGLVIRSDHGDAVVPGPVITDPEEL-TGPFDLVILAVKA 78 (305)
T ss_pred eEEEECCCHHHHHHHHHHHHCCC-ceEEEec-HHHHHHHHhCCeEEEeCCCeEEecceeecCHHHc-cCCCCEEEEEecc
Confidence 58899999999987777777787 7888888 777777766553211110000 00000001111 1368999998887
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
.. ++.+++.++
T Consensus 79 ~~-~~~~~~~l~ 89 (305)
T PRK12921 79 YQ-LDAAIPDLK 89 (305)
T ss_pred cC-HHHHHHHHH
Confidence 54 455555544
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=92.96 E-value=0.69 Score=39.94 Aligned_cols=79 Identities=15% Similarity=0.164 Sum_probs=46.9
Q ss_pred CCCEEEEEcCC---hHHHHHHHHHHHcCCCeEEEEcCC-----------hhhH----HHHHhcCCCE-Ee--CCCCCCch
Q 022865 194 PGSIVAVFGLG---TVGLAVAEGAKAAGASRVIGIDID-----------PKKF----DRAKNFGVTE-FV--NPKDHDKP 252 (291)
Q Consensus 194 ~g~~vlI~G~g---~vG~~ai~~a~~~g~~~v~~~~~~-----------~~~~----~~~~~~ga~~-~i--~~~~~~~~ 252 (291)
+++++||+|++ ++|...+..+...|+ +|+.+.+. .+++ +.+++.|... .+ |..+ .++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~-~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~-~~~ 82 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGA-DIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQ-NDA 82 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHH
Confidence 57899999883 799998888888999 77775321 1111 2223345432 22 2222 234
Q ss_pred HHHHHHhhc--CCCccEEEEcCCC
Q 022865 253 IQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 253 ~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
+.+.+.+.. .+.+|++|.+.|.
T Consensus 83 i~~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 83 PKELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHHHcCCCcEEEECCCC
Confidence 444444433 2368999999874
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.22 Score=43.21 Aligned_cols=99 Identities=17% Similarity=0.233 Sum_probs=59.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEE--eCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEF--VNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~--i~~~~~~~~~~~~v~ 258 (291)
+.....+.||++|+=-|.|. |.+...++++.| -.+|+..+.++++.+.+++ +|.+.. +...+ .. .+...
T Consensus 32 I~~~l~i~pG~~VlEaGtGS-G~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~D--v~-~~g~~ 107 (247)
T PF08704_consen 32 ILMRLDIRPGSRVLEAGTGS-GSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHRD--VC-EEGFD 107 (247)
T ss_dssp HHHHTT--TT-EEEEE--TT-SHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES---GG-CG--S
T ss_pred HHHHcCCCCCCEEEEecCCc-HHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEecc--ee-ccccc
Confidence 55678899999998887655 777888888776 3489999999999887753 555432 21111 00 00111
Q ss_pred hhcCCCcc-EEEEcCCChHHHHHHHHHh-hcc
Q 022865 259 DLTDGGVD-YSFECIGNVSVMRAALECC-HKV 288 (291)
Q Consensus 259 ~~~~gg~d-~v~d~~g~~~~~~~~~~~l-~~~ 288 (291)
+-....+| +++|--.....+..+.+.| +++
T Consensus 108 ~~~~~~~DavfLDlp~Pw~~i~~~~~~L~~~g 139 (247)
T PF08704_consen 108 EELESDFDAVFLDLPDPWEAIPHAKRALKKPG 139 (247)
T ss_dssp TT-TTSEEEEEEESSSGGGGHHHHHHHE-EEE
T ss_pred ccccCcccEEEEeCCCHHHHHHHHHHHHhcCC
Confidence 11123688 4556555556899999999 666
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.93 E-value=0.68 Score=39.78 Aligned_cols=75 Identities=13% Similarity=0.205 Sum_probs=46.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCC--EEe--CCCCCCchHHHHHHhhc--CCCc
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVT--EFV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~--~~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++|+|+ +++|...+..+. .|. +|+.+++++++++.+ ++.+.+ ..+ |..+ .++..+.+.+.. .+++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~-~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGE-DVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQD-LDTHRELVKQTQELAGEI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCC-EEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCC-HHHHHHHHHHHHHhcCCC
Confidence 6889987 999988776655 487 888888888776544 223432 222 2222 233333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999998884
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.53 Score=41.74 Aligned_cols=40 Identities=30% Similarity=0.352 Sum_probs=33.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
.+|.|+|+|.+|...++.+...|. +|+.++.++++++.++
T Consensus 4 ~kIaViGaG~mG~~iA~~la~~G~-~V~l~d~~~~~l~~~~ 43 (287)
T PRK08293 4 KNVTVAGAGVLGSQIAFQTAFHGF-DVTIYDISDEALEKAK 43 (287)
T ss_pred cEEEEECCCHHHHHHHHHHHhcCC-eEEEEeCCHHHHHHHH
Confidence 479999999999988888878898 8999999988766554
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.7 Score=41.75 Aligned_cols=85 Identities=20% Similarity=0.149 Sum_probs=54.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CC-C----C-CCchHHHHHHhhcCCCccEE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NP-K----D-HDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~-~----~-~~~~~~~~v~~~~~gg~d~v 268 (291)
-+|.|+|+|.+|...+..+...|. .|++.++++++.+.+.+.+..... .. . - ...+..+.+ ..+|+|
T Consensus 5 m~I~iIG~G~mG~~ia~~L~~~G~-~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~-----~~aD~V 78 (328)
T PRK14618 5 MRVAVLGAGAWGTALAVLAASKGV-PVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL-----AGADFA 78 (328)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH-----cCCCEE
Confidence 368999999999998888888888 899999988877666553211000 00 0 0 001121111 258999
Q ss_pred EEcCCChHHHHHHHHHhhc
Q 022865 269 FECIGNVSVMRAALECCHK 287 (291)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~ 287 (291)
|-++.... +...++.+++
T Consensus 79 i~~v~~~~-~~~v~~~l~~ 96 (328)
T PRK14618 79 VVAVPSKA-LRETLAGLPR 96 (328)
T ss_pred EEECchHH-HHHHHHhcCc
Confidence 99998865 5666665554
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=92.89 E-value=0.45 Score=42.88 Aligned_cols=77 Identities=21% Similarity=0.201 Sum_probs=45.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHH-HhcCCC--EEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRA-KNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
++.+|||+|+ |.+|...+..+...| ..+|+++++++.+...+ ..+... .++..+-.+. +.+.+... ++|+|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~---~~l~~~~~-~iD~V 78 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK---ERLTRALR-GVDYV 78 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH---HHHHHHHh-cCCEE
Confidence 3678999987 999998887776665 23788887776554322 233211 1221111111 22333222 58999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.++|.
T Consensus 79 ih~Ag~ 84 (324)
T TIGR03589 79 VHAAAL 84 (324)
T ss_pred EECccc
Confidence 999874
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 291 | ||||
| 4dl9_A | 396 | Crystal Structure Of S-nitrosoglutathione Reductase | 1e-154 | ||
| 3uko_A | 378 | Crystal Structure Of S-Nitrosoglutathione Reductase | 1e-151 | ||
| 3qj5_A | 374 | S-Nitrosoglutathione Reductase (Gsnor) In Complex W | 1e-106 | ||
| 1teh_A | 373 | Structure Of Human Liver Chichi Alcohol Dehydrogena | 1e-106 | ||
| 1mc5_A | 374 | Ternary Complex Of Human Glutathione-Dependent Form | 1e-106 | ||
| 2fzw_A | 373 | Structure Of The Binary Complex Of The E67l Mutant | 1e-106 | ||
| 1cdo_A | 374 | Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co | 9e-92 | ||
| 3cos_A | 381 | Crystal Structure Of Human Class Ii Alcohol Dehydro | 1e-89 | ||
| 1hdy_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 7e-85 | ||
| 1htb_A | 374 | Crystallization Of Human Beta3 Alcohol Dehydrogenas | 5e-84 | ||
| 1hdx_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 6e-84 | ||
| 1hdz_A | 374 | Three-Dimensional Structures Of Three Human Alcohol | 1e-83 | ||
| 1ht0_A | 374 | Human Gamma-2 Alcohol Dehydrogense Length = 374 | 4e-82 | ||
| 1hso_A | 374 | Human Alpha Alcohol Dehydrogenase (Adh1a) Length = | 8e-82 | ||
| 1e3l_A | 376 | P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase | 1e-81 | ||
| 1qlh_A | 374 | Horse Liver Alcohol Dehydrogenase Complexed To Nad | 1e-81 | ||
| 6adh_A | 374 | Structure Of Triclinic Ternary Complex Of Horse Liv | 2e-81 | ||
| 1n8k_A | 374 | Horse Liver Alcohol Dehydrogenase Val292thr Mutant | 2e-81 | ||
| 1ju9_A | 374 | Horse Liver Alcohol Dehydrogenase Val292ser Mutant | 2e-81 | ||
| 3oq6_A | 374 | Horse Liver Alcohol Dehydrogenase A317c Mutant Comp | 2e-81 | ||
| 1axe_A | 374 | Crystal Structure Of The Active-Site Mutant Phe93-> | 3e-81 | ||
| 1axg_A | 374 | Crystal Structure Of The Val203->ala Mutant Of Live | 6e-81 | ||
| 1qv6_A | 374 | Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG | 8e-81 | ||
| 1mgo_A | 374 | Horse Liver Alcohol Dehydrogenase Phe93ala Mutant L | 8e-81 | ||
| 1ee2_B | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 8e-81 | ||
| 1a71_A | 374 | Ternary Complex Of An Active Site Double Mutant Of | 9e-81 | ||
| 1ee2_A | 373 | The Structure Of Steroid-Active Alcohol Dehydrogena | 2e-80 | ||
| 1e3e_A | 376 | Mouse Class Ii Alcohol Dehydrogenase Complex With N | 2e-80 | ||
| 1p0c_A | 373 | Crystal Structure Of The Nadp(H)-Dependent Vertebra | 3e-79 | ||
| 1agn_A | 373 | X-Ray Structure Of Human Sigma Alcohol Dehydrogenas | 2e-76 | ||
| 1d1t_A | 373 | Mutant Of Human Sigma Alcohol Dehydrogenase With Le | 6e-76 | ||
| 1f8f_A | 371 | Crystal Structure Of Benzyl Alcohol Dehydrogenase F | 7e-34 | ||
| 1rjw_A | 339 | Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd | 2e-18 | ||
| 1llu_A | 342 | The Ternary Complex Of Pseudomonas Aeruginosa Alcoh | 2e-18 | ||
| 3pii_A | 339 | Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog | 3e-18 | ||
| 3meq_A | 365 | Crystal Structure Of Alcohol Dehydrogenase From Bru | 6e-18 | ||
| 3s1l_A | 340 | Crystal Structure Of Apo-Form Furx Length = 340 | 3e-17 | ||
| 1h2b_A | 359 | Crystal Structure Of The Alcohol Dehydrogenase From | 1e-16 | ||
| 2hcy_A | 347 | Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi | 4e-16 | ||
| 3two_A | 348 | The Crystal Structure Of Cad From Helicobacter Pylo | 7e-16 | ||
| 2h6e_A | 344 | Crystal Structure Of The D-Arabinose Dehydrogenase | 1e-15 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 1e-14 | ||
| 3fpl_A | 351 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 1e-13 | ||
| 4ilk_A | 359 | Crystal Structure Of Short Chain Alcohol Dehydrogen | 2e-13 | ||
| 1vj0_A | 380 | Crystal Structure Of Alcohol Dehydrogenase (Tm0436) | 6e-13 | ||
| 4eex_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 8e-13 | ||
| 2nvb_A | 352 | Contribution Of Pro275 To The Thermostability Of Th | 1e-12 | ||
| 1ykf_A | 352 | Nadp-Dependent Alcohol Dehydrogenase From Thermoana | 1e-12 | ||
| 1uuf_A | 369 | Crystal Structure Of A Zinc-Type Alcohol Dehydrogen | 1e-12 | ||
| 4eez_A | 348 | Crystal Structure Of Lactococcus Lactis Alcohol Deh | 2e-12 | ||
| 4a2c_A | 346 | Crystal Structure Of Galactitol-1-Phosphate Dehydro | 1e-11 | ||
| 2xaa_A | 345 | Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube | 3e-11 | ||
| 2eer_A | 347 | Structural Study Of Project Id St2577 From Sulfolob | 4e-11 | ||
| 2dq4_A | 343 | Crystal Structure Of Threonine 3-Dehydrogenase Leng | 1e-10 | ||
| 1e3j_A | 352 | Ketose Reductase (Sorbitol Dehydrogenase) From Silv | 1e-10 | ||
| 2dfv_A | 347 | Hyperthermophilic Threonine Dehydrogenase From Pyro | 6e-10 | ||
| 2d8a_A | 348 | Crystal Structure Of Ph0655 From Pyrococcus Horikos | 6e-10 | ||
| 3gfb_A | 350 | L-Threonine Dehydrogenase (Tktdh) From The Hyperthe | 9e-10 | ||
| 1yqd_A | 366 | Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ | 2e-09 | ||
| 4ej6_A | 370 | Crystal Structure Of A Putative Zinc-Binding Dehydr | 2e-09 | ||
| 1jqb_A | 351 | Alcohol Dehydrogenase From Clostridium Beijerinckii | 4e-09 | ||
| 1ped_A | 351 | Bacterial Secondary Alcohol Dehydrogenase (Apo-Form | 2e-08 | ||
| 2b83_A | 351 | A Single Amino Acid Substitution In The Clostridium | 5e-08 | ||
| 1pl7_A | 356 | Human Sorbitol Dehydrogenase (Apo) Length = 356 | 6e-08 | ||
| 3ftn_A | 352 | Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDRO | 7e-08 | ||
| 3qe3_A | 355 | Sheep Liver Sorbitol Dehydrogenase Length = 355 | 7e-08 | ||
| 1pl6_A | 356 | Human SdhNADHINHIBITOR COMPLEX Length = 356 | 1e-07 | ||
| 1nto_A | 347 | N249y Mutant Of Alcohol Dehydrogenase From The Arch | 1e-07 | ||
| 1r37_A | 347 | Alcohol Dehydrogenase From Sulfolobus Solfataricus | 1e-07 | ||
| 1kol_A | 398 | Crystal Structure Of Formaldehyde Dehydrogenase Len | 2e-07 | ||
| 3fsr_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 2e-07 | ||
| 3i4c_A | 347 | Crystal Structure Of Sulfolobus Solfataricus Adh(Ss | 3e-07 | ||
| 1jvb_A | 347 | Alcohol Dehydrogenase From The Archaeon Sulfolobus | 4e-07 | ||
| 2cd9_A | 366 | Sulfolobus Solfataricus Glucose Dehydrogenase 1 - A | 5e-07 | ||
| 2cdb_A | 366 | Sulfolobus Solfataricus Glucose Dehydrogenase 1 In | 2e-06 | ||
| 3fpc_A | 352 | Chimera Of Alcohol Dehydrogenase By Exchange Of The | 1e-05 | ||
| 1qor_A | 327 | Crystal Structure Of Escherichia Coli Quinone Oxido | 2e-05 | ||
| 3m6i_A | 363 | L-Arabinitol 4-Dehydrogenase Length = 363 | 5e-05 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 5e-05 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 1e-04 | ||
| 2b5w_A | 357 | Crystal Structure Of D38c Glucose Dehydrogenase Mut | 2e-04 | ||
| 1wly_A | 333 | Crystal Structure Of 2-haloacrylate Reductase Lengt | 3e-04 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 4e-04 | ||
| 2dph_A | 398 | Crystal Structure Of Formaldehyde Dismutase Length | 6e-04 |
| >pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396 | Back alignment and structure |
|
| >pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378 | Back alignment and structure |
|
| >pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374 | Back alignment and structure |
|
| >pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373 | Back alignment and structure |
|
| >pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374 | Back alignment and structure |
|
| >pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373 | Back alignment and structure |
|
| >pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374 | Back alignment and structure |
|
| >pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381 | Back alignment and structure |
|
| >pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374 | Back alignment and structure |
|
| >pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374 | Back alignment and structure |
|
| >pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374 | Back alignment and structure |
|
| >pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374 | Back alignment and structure |
|
| >pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double Mutant Of Gly 293 Ala And Pro 295 Thr Length = 374 | Back alignment and structure |
|
| >pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver Alcohol Dehydrogenase At 2.9 Angstroms Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant Complexed To Nad+ And Pyrazole Length = 374 | Back alignment and structure |
|
| >pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant Length = 374 | Back alignment and structure |
|
| >pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of Horse Liver Alcohol Dehydrogenase In Complex With Nad And Inhibitor Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver Alcohol Dehydrogenase Complexed With Cofactor Nad And Inhibitor Trifluoroethanol Solved To 2.5 Angstrom Resolution Length = 374 | Back alignment and structure |
|
| >pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol Length = 374 | Back alignment and structure |
|
| >pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant Length = 374 | Back alignment and structure |
|
| >pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With Nad And Trifluoroethanol Length = 374 | Back alignment and structure |
|
| >pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373 | Back alignment and structure |
|
| >pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376 | Back alignment and structure |
|
| >pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373 | Back alignment and structure |
|
| >pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373 | Back alignment and structure |
|
| >pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373 | Back alignment and structure |
|
| >pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371 | Back alignment and structure |
|
| >pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339 | Back alignment and structure |
|
| >pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342 | Back alignment and structure |
|
| >pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339 | Back alignment and structure |
|
| >pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365 | Back alignment and structure |
|
| >pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340 | Back alignment and structure |
|
| >pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359 | Back alignment and structure |
|
| >pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347 | Back alignment and structure |
|
| >pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348 | Back alignment and structure |
|
| >pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of C. Beijerinckii Adh By T. Brockii Adh Length = 351 | Back alignment and structure |
|
| >pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359 | Back alignment and structure |
|
| >pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380 | Back alignment and structure |
|
| >pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348 | Back alignment and structure |
|
| >pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The Alcohol Dehydrogenases (Adhs) Length = 352 | Back alignment and structure |
|
| >pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium Brockii Length = 352 | Back alignment and structure |
|
| >pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369 | Back alignment and structure |
|
| >pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348 | Back alignment and structure |
|
| >pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346 | Back alignment and structure |
|
| >pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345 | Back alignment and structure |
|
| >pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347 | Back alignment and structure |
|
| >pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352 | Back alignment and structure |
|
| >pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347 | Back alignment and structure |
|
| >pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348 | Back alignment and structure |
|
| >pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350 | Back alignment and structure |
|
| >pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366 | Back alignment and structure |
|
| >pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370 | Back alignment and structure |
|
| >pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii: Crystal Structure Of Mutant With Enhanced Thermal Stability Length = 351 | Back alignment and structure |
|
| >pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form) Length = 351 | Back alignment and structure |
|
| >pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium Beijerinckii Alcohol Dehydrogenase Is Critical For Thermostabilization Length = 351 | Back alignment and structure |
|
| >pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356 | Back alignment and structure |
|
| >pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE BY EXCHANGE Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355 | Back alignment and structure |
|
| >pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356 | Back alignment and structure |
|
| >pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347 | Back alignment and structure |
|
| >pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347 | Back alignment and structure |
|
| >pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398 | Back alignment and structure |
|
| >pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By C. Beijerinckii Adh Length = 352 | Back alignment and structure |
|
| >pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347 | Back alignment and structure |
|
| >pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347 | Back alignment and structure |
|
| >pdb|2CD9|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 - Apo Form Length = 366 | Back alignment and structure |
|
| >pdb|2CDB|A Chain A, Sulfolobus Solfataricus Glucose Dehydrogenase 1 In Complex With Nadp And Glucose Length = 366 | Back alignment and structure |
|
| >pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By E. Histolytica Adh Length = 352 | Back alignment and structure |
|
| >pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327 | Back alignment and structure |
|
| >pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase Length = 363 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
| >pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant From Haloferax Mediterranei Length = 357 | Back alignment and structure |
|
| >pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase Length = 398 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373 | Back alignment and structure |
|---|
Score = 549 bits (1418), Expect = 0.0
Identities = 198/287 (68%), Positives = 228/287 (79%), Gaps = 1/287 (0%)
Query: 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP 64
+VI CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61
Query: 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
ILGH AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G+
Sbjct: 62 VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGL 121
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP APLDKVCLLGCG+ TG G
Sbjct: 122 MP-DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYG 180
Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
A NTAK+EPGS+ AVFGLG VGLAV G K AGASR+IG+DI+ KF RAK FG TE +
Sbjct: 181 AAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240
Query: 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
NP+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CHK G
Sbjct: 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGV 287
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373 | Back alignment and structure |
|---|
Score = 546 bits (1410), Expect = 0.0
Identities = 159/291 (54%), Positives = 199/291 (68%), Gaps = 3/291 (1%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M T G+ ITCKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+ P
Sbjct: 1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT 120
FP ILGHEA G+VES+G GVT V+PGD VIP + +C C+ CKS +N C K
Sbjct: 61 K-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGA 119
Query: 121 GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP 180
G+M D SRF+ GKPIY+ MGTSTF++YTVV D++VAKIDP+APL+ CL+GCG
Sbjct: 120 KTGLMA-DMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFA 177
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
TG GA NTAKV PGS AVFGLG VG + G KAAGASR+IG+ KF +A G
Sbjct: 178 TGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA 237
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
TE +NPKD+DKPI +V+ + T+GGVDY+ EC G + M AL+ + SG
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGV 288
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376 | Back alignment and structure |
|---|
Score = 544 bits (1404), Expect = 0.0
Identities = 153/292 (52%), Positives = 204/292 (69%), Gaps = 4/292 (1%)
Query: 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
T+G+VI CKAA+AW+ PL IE+++V+PP+A EVRI+++ T +C TD K L
Sbjct: 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-AL 60
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR---GA 119
FP +LGHE AGIVESVG GVT +PGD VIP + +C+ CK C S TNLCGK+R
Sbjct: 61 FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
T +M DR SRF+ G+ IYHFMG S+FSQYTVV + ++A++D +A L++VCL+GCG
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGF 180
Query: 180 PTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
+G GA NTAKV PGS AVFGLG VGL+ G K AGASR+I IDI+ +KF +AK G
Sbjct: 181 SSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALG 240
Query: 240 VTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
T+ +NP++ DKP+Q V+ +LT GGVDYS +C G ++AA++C G+
Sbjct: 241 ATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGS 292
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374 | Back alignment and structure |
|---|
Score = 543 bits (1402), Expect = 0.0
Identities = 171/290 (58%), Positives = 212/290 (73%), Gaps = 1/290 (0%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+T G+VI CKAAVAWE NKPLVIE+++V P A E+RIKI+ T +CHTD Y +
Sbjct: 1 ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
FP +LGHE AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C K
Sbjct: 61 GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANES 120
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
+M+ +++RF+ G+ + F+GTSTFSQYTVV+ ++VAKIDP APLD VCLLGCGV T
Sbjct: 121 PD-VMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSAPLDTVCLLGCGVST 179
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
G GA NTAKVEPGS AVFGLG VGLA G +AGA R+I +D++P KF++AK FG T
Sbjct: 180 GFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGAT 239
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
+FVNP DH +PI QVL +T+GGVD+S EC+GNV VMR ALE C K G
Sbjct: 240 DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGV 289
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374 | Back alignment and structure |
|---|
Score = 542 bits (1399), Expect = 0.0
Identities = 162/290 (55%), Positives = 204/290 (70%), Gaps = 2/290 (0%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST G+VI CKAAV WE KP IE+V+VAPP+A EVRIK++ T +C +D + SG
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
P I GHEAAGIVES+GEGVT V+PGD VIP + +C +C+ CK + N C K +
Sbjct: 61 -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
G M D SRF+ GKPI+HF+GTSTFSQYTVV ++SVAKID +PL+KVCL+GCG T
Sbjct: 120 RGTMQ-DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLIGCGFST 178
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
G G+ AKV GS AVFGLG VGL+V G KAAGA+R+IG+DI+ KF +AK G T
Sbjct: 179 GYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGAT 238
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
E VNP+D+ KPIQ+VL ++++GGVD+SFE IG + M AL CC + G
Sbjct: 239 ECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGV 288
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371 | Back alignment and structure |
|---|
Score = 473 bits (1220), Expect = e-169
Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 7/284 (2%)
Query: 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPC 65
++ AAV ++ +++ PQ EV +K++ T +CHTD K P P
Sbjct: 3 ELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPA 61
Query: 66 ILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
+LGHE +GI+E++G VTE+Q GDHV+ Y C +C C +G C + G +G
Sbjct: 62 VLGHEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD 120
Query: 126 MNDRKSRFSINGKPIY--HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGL 183
+ + + + HF S+F+ Y + + + K+ P++ + LGCG+ TG
Sbjct: 121 S-EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGA 179
Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
GA N KV P S +G G VGL+ AK GAS +I +DI + + AK G T
Sbjct: 180 GACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHV 239
Query: 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+N K D + ++TDGGV+++ E G+ +++ ++
Sbjct: 240 INSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALGI 281
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380 | Back alignment and structure |
|---|
Score = 420 bits (1083), Expect = e-148
Identities = 71/288 (24%), Positives = 122/288 (42%), Gaps = 21/288 (7%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ A V + N+PLV ++ +++ G + ++IL +C +D + + G+DP P IL
Sbjct: 16 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 75
Query: 68 GHEAAGIVESVGEGVT-----EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
GHE AG V V ++PGD ++ C EC +CK K R
Sbjct: 76 GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNR----K 131
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
+N S + H G +S + V+ + V K+ + LD + + C T
Sbjct: 132 VYGINRGCSEYP-------HLRGC--YSSHIVLDPETDVLKVSEKDDLDVLAMAMCSGAT 182
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
A + G V + G G +GL A++ GA VI I P + A+ G
Sbjct: 183 AYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGAD 242
Query: 242 EFVNPKDHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
+N ++ + ++ ++D+T G G D+ E G+ + E +
Sbjct: 243 LTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRR 290
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 223 bits (571), Expect = 9e-72
Identities = 64/278 (23%), Positives = 96/278 (34%), Gaps = 24/278 (8%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILG 68
KA E V+ D+ P GE+ +K+ LCH+D + + P LG
Sbjct: 2 KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLG 61
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
HE G V +GEGVT GD V C C C G+ N C +
Sbjct: 62 HEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITP----- 116
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV-CLLGCGVPTGLGAVW 187
G + ++Y +V L G+
Sbjct: 117 --PGLGSPG----------SMAEYMIVDSARHLVPIGDLDPVAAAPLTDAGLTPYHAISR 164
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
+ PGS V G+G +G + +A A+RVI +D+D + A+ G V
Sbjct: 165 VLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVKSG 224
Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
+ +LT G G F+ +G S + A +
Sbjct: 225 --AGAADAIR-ELTGGQGATAVFDFVGAQSTIDTAQQV 259
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359 | Back alignment and structure |
|---|
Score = 199 bits (509), Expect = 2e-62
Identities = 77/293 (26%), Positives = 121/293 (41%), Gaps = 34/293 (11%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDP 59
S V KAA E NKPL IEDV +V ++I +CHTD + G
Sbjct: 7 FSQSLGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWH 66
Query: 60 EGL---FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 116
E L P LGHE G +E V EGV ++ GD VI C C++G+ C +
Sbjct: 67 ELLQPKLPYTLGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENL 126
Query: 117 RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK---VC 173
+I+G F+++ SV K+ +K +
Sbjct: 127 EF------------PGLNIDG----------GFAEFMRTSHRSVIKLPKDISREKLVEMA 164
Query: 174 LLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232
L T AV + PG+ VA+ G+G +G + K + VI +D+ +K
Sbjct: 165 PLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKL 224
Query: 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
A+ G V+ + P++QV+ +LT G GV+ + + +G+ + +
Sbjct: 225 KLAERLGADHVVDAR--RDPVKQVM-ELTRGRGVNVAMDFVGSQATVDYTPYL 274
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 191 bits (488), Expect = 4e-59
Identities = 68/285 (23%), Positives = 109/285 (38%), Gaps = 41/285 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA + + +V + P ++ +K+ +C TD + G+ P P LGHE
Sbjct: 25 KAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFPST-PPVTLGHE 82
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
GIV G V ++ PG + C C C++G+ NLC +R
Sbjct: 83 FCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLR------------- 129
Query: 131 SRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGLG 184
+G F++Y +V +I L C +
Sbjct: 130 ------------AIGIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCL----H 173
Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
V + + ++ GS VA+ G G +GL + A+ AGA+ VI K A+ G T V
Sbjct: 174 GV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATV 232
Query: 245 NPKDHDKPIQQV--LVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
+P D ++ + V L GGVD EC G ++ +
Sbjct: 233 DPSAGD-VVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKA 276
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 187 bits (477), Expect = 1e-57
Identities = 77/288 (26%), Positives = 118/288 (40%), Gaps = 45/288 (15%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 66
A + +P + +V V P GEV IK+L T++C TD + + + P I
Sbjct: 6 VAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEW-NEWAQSRIKPPQI 64
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
+GHE AG V +G GV ++ GD+V C +C C+ G+ ++C +
Sbjct: 65 MGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTK--------- 115
Query: 127 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 180
G T F++Y VV ++ K P + L LG V
Sbjct: 116 ----------------IFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQEPLGNAVD 159
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
T L G V + G G +GL AKA+GA VI + + + AK G
Sbjct: 160 TVLAGP------ISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA 213
Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
+NP + D + + ++D+TDG GVD E G + L+
Sbjct: 214 DYVINPFEED--VVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTP 259
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 6e-57
Identities = 67/285 (23%), Positives = 106/285 (37%), Gaps = 42/285 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
K+ V + + + + EVR+KI + LC +D + +P LGH
Sbjct: 2 KSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFK-NGAHYYPITLGH 59
Query: 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
E +G +++VG GV ++ PGD V C C C G + C K
Sbjct: 60 EFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYD------------ 107
Query: 130 KSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVPTGL 183
F+G+ F++Y VV +V + P++ + G+
Sbjct: 108 -------------FIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGL---- 150
Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
A A+ V + G GT+GL + A A GA V IDI +K AK+FG +
Sbjct: 151 HAFHL-AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQT 209
Query: 244 VNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
N + Q+ L + E G + A+E
Sbjct: 210 FNSSEMS--APQMQSVLRELRFNQLILETAGVPQTVELAVEIAGP 252
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 6e-57
Identities = 66/284 (23%), Positives = 113/284 (39%), Gaps = 35/284 (12%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--------KDPEGL 62
+A E KPL ++++ V P+ +V IK+ +CH+D + G +D
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
P LGHE AG +E VG+ V GD V C +C+ G+ +LC R G
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR-WLG- 119
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
+ +G +++Y +V + + L C T
Sbjct: 120 ----------INFDG----------AYAEYVIVPHYKYMYKLRRLNAVEAAPLTCSGITT 159
Query: 183 LGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
AV A ++P + V G G +G + AKA + +IG+D+ + + AK G
Sbjct: 160 YRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGAD 218
Query: 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
+N D P+ ++ +T+ GVD + + + +
Sbjct: 219 YVINASMQD-PLAEIR-RITESKGVDAVIDLNNSEKTLSVYPKA 260
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 185 bits (472), Expect = 7e-57
Identities = 68/287 (23%), Positives = 111/287 (38%), Gaps = 44/287 (15%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 66
+A P + L + D V P GE+ +++ ++C TD + W D P +
Sbjct: 2 RALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKW-DAWARGRIRPPLV 60
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE +G+VE+VG GV Q GDHV C C C++G ++C +
Sbjct: 61 TGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQ--------- 111
Query: 127 NDRKSRFSINGKPIYHFMGTS---TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 180
+G F++Y VV + P + + G V
Sbjct: 112 ----------------ILGVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVH 155
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
T G V + G G +GL A +A+GA ++ D +P + A+ +
Sbjct: 156 TVY-----AGSGVSGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPYA- 209
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
VNP + D + +V+ +T GV+ E GN + + L
Sbjct: 210 DRLVNPLEED--LLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIP 254
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 1e-56
Identities = 73/283 (25%), Positives = 111/283 (39%), Gaps = 34/283 (12%)
Query: 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCI 66
KAA+ + ++PL IEDV + PQ EV I+I +C TD W G + + P I
Sbjct: 3 KSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPII 62
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LGHE AG + VGE + +V+ GD+V+ C++C+ GK N+C G
Sbjct: 63 LGHENAGTIVEVGE-LAKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQI-IPG----- 115
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+ NG FS+Y +V + L T +GA+
Sbjct: 116 ------QTTNG----------GFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGTTSMGAI 159
Query: 187 ---WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTE 242
+V V G+G + + + KA + ++GI K D A G
Sbjct: 160 RQALPFISKFAEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGADY 219
Query: 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
KD + I LTDG G + + +G +
Sbjct: 220 VSEMKDAESLIN----KLTDGLGASIAIDLVGTEETTYNLGKL 258
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356 | Back alignment and structure |
|---|
Score = 174 bits (443), Expect = 2e-52
Identities = 63/294 (21%), Positives = 105/294 (35%), Gaps = 54/294 (18%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF----PCI 66
+ V L +E+ + P EV +++ +C +D + W G F P +
Sbjct: 9 LSLV-VHGPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEY-GRIGNFIVKKPMV 66
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHV-----IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
LGHEA+G VE VG V ++PGD V P +FCK G+ NL +
Sbjct: 67 LGHEASGTVEKVGSSVKHLKPGDRVAIEPGAPR-----ENDEFCKMGRYNLSPSIF---- 117
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL--- 174
F T ++ + K+ ++ L
Sbjct: 118 ---------------------FCATPPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALIEP 156
Query: 175 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
L G+ A V G V V G G +G+ AKA GA++V+ D+ + +
Sbjct: 157 LSVGI----HAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSK 211
Query: 235 AKNFGVTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
AK G + + I + + + + EC G + ++A +
Sbjct: 212 AKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRS 265
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 175 bits (445), Expect = 2e-52
Identities = 56/300 (18%), Positives = 100/300 (33%), Gaps = 53/300 (17%)
Query: 11 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF------ 63
+ W + + +E+V + E+ IK+ +C +D + + +
Sbjct: 32 LGSKVWRYPE-VRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTG 90
Query: 64 -PCILGHEAAGIVESVGEGVTE------VQPGDHVIPCYQAECRECKFCKSGKTNLCGKV 116
P LGHE +G+V G + G+ V C C+ C G N C +
Sbjct: 91 FPVTLGHEFSGVVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENL 150
Query: 117 RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-------DPQAPL 169
G +++G F++Y V + +
Sbjct: 151 NEL---GF---------NVDG----------AFAEYVKVDAKYAWSLRELEGVYEGDRLF 188
Query: 170 DKVCL---LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
L + + PG V + G G +GLA K AGAS+VI +
Sbjct: 189 LAGSLVEPTSVAYN---AVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSE 245
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECC 285
+ + AK G ++P + + ++D T+G G E G ++ +E
Sbjct: 246 PSEVRRNLAKELGADHVIDPTKEN--FVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEV 303
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 8e-52
Identities = 69/281 (24%), Positives = 109/281 (38%), Gaps = 28/281 (9%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
K K + + + P + ++ L A C +D +T ILGHE
Sbjct: 2 KGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
A G V VG V + +PGD V+ P + G G G N
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVVVPAITP-DWRTSEVQRGYHQHSG---GMLAGWKFSN-- 114
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
+G F ++ V+ D+++A + + PL+ ++ + TG
Sbjct: 115 ----VKDG----------VFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTTGFHGAE 160
Query: 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247
A ++ G V V G+G VGL GA GA R+ + D A +G T+ +N K
Sbjct: 161 L-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINYK 219
Query: 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
+ D ++Q+L TDG GVD G+V A++
Sbjct: 220 NGD-IVEQIL-KATDGKGVDKVVIAGGDVHTFAQAVKMIKP 258
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 2e-50
Identities = 77/291 (26%), Positives = 124/291 (42%), Gaps = 39/291 (13%)
Query: 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
T K + +E + L +D+ V P+A E+ I + ++ +CHTD + W G P + P +
Sbjct: 5 TQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVG 64
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE AG+V +GE V + GD+ I C C++C+ G + C +
Sbjct: 65 GHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSG------ 118
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPT--GL 183
++ +G +F QY V A I L +V + C G+ L
Sbjct: 119 ------YTHDG----------SFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKAL 162
Query: 184 GAVWNTAKVEPGSIVAVFGLGTVGL---AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
+A + G VA+ G GL AV + AKA G RV+GID K + ++ G
Sbjct: 163 ----KSANLMAGHWVAISGAAG-GLGSLAV-QYAKAMGY-RVLGIDGGEGKEELFRSIGG 215
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
F++ + VL TDGG + + + A+ + +GT
Sbjct: 216 EVFIDFTKEKDIVGAVL-KATDGGAHGVINVSVSEAAIEASTRYV-RANGT 264
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363 | Back alignment and structure |
|---|
Score = 168 bits (429), Expect = 2e-50
Identities = 68/298 (22%), Positives = 102/298 (34%), Gaps = 51/298 (17%)
Query: 7 VITCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTD--AYTWSGKDPEGLF 63
V T W +E VQ + GEV + + T +C +D + G
Sbjct: 12 VFTNPQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKH---GCIGPM 68
Query: 64 ----PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
+LGHE+AG V +V V ++ GD V Q C C+ C +G+ N C +V
Sbjct: 69 IVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVD-- 126
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL- 174
F+ T +Y V KI + +
Sbjct: 127 -----------------------FLSTPPVPGLLRRYVNHPAVWCHKI-GNMSYENGAML 162
Query: 175 --LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232
L + A A V G V + G G +GL AKAAGA ++ DID +
Sbjct: 163 EPLSVAL-----AGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRL 217
Query: 233 DRAKNFGVTEFVNPKDHDKP--IQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
AK + + + +V+ G + EC G S + AA+
Sbjct: 218 KFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKF 275
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340 | Back alignment and structure |
|---|
Score = 167 bits (426), Expect = 4e-50
Identities = 82/290 (28%), Positives = 123/290 (42%), Gaps = 40/290 (13%)
Query: 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCIL 67
KAAV PL I++V V P G+V++KI + +CHTD + G P P I
Sbjct: 2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIP 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE G V +VG GV+ V+ GD V +P + C C+ C G LC K +
Sbjct: 62 GHEGVGYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTG------ 115
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGA 185
+S+NG + +Y V V + + ++ + C GV
Sbjct: 116 ------YSVNG----------GYGEYVVADPNYVGLLPDKVGFVEIAPILCAGV-----T 154
Query: 186 VWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
V+ PG V + G+G +G +AV + A+A G RV +DID K + A+ G
Sbjct: 155 VYKGLKVTDTRPGQWVVISGIGGLGHVAV-QYARAMGL-RVAAVDIDDAKLNLARRLGAE 212
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
VN +D D P + ++ GG + A+ + GT
Sbjct: 213 VAVNARDTD-PAAWLQKEI--GGAHGVLVTAVSPKAFSQAIGMV-RRGGT 258
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339 | Back alignment and structure |
|---|
Score = 166 bits (424), Expect = 7e-50
Identities = 83/288 (28%), Positives = 125/288 (43%), Gaps = 40/288 (13%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGH 69
KAAV + +PL I++V+ GEV ++I +CHTD + G P P I GH
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 70 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
E GIVE VG GVT ++ GD V IP + C C +C SG+ LC + A
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAG-------- 113
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPTGLGAVW 187
+S++G +++Y V KI ++ + C GV +
Sbjct: 114 ----YSVDG----------GYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGV-----TTY 154
Query: 188 N---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
+PG VA++G+G +G +AV + AKA G V+ +DI +K + AK G
Sbjct: 155 KALKVTGAKPGEWVAIYGIGGLGHVAV-QYAKAMGL-NVVAVDIGDEKLELAKELGADLV 212
Query: 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
VNP D + GGV + + ++A + G
Sbjct: 213 VNPLKEDAAKF---MKEKVGGVHAAVVTAVSKPAFQSAYNSI-RRGGA 256
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 1e-48
Identities = 74/290 (25%), Positives = 116/290 (40%), Gaps = 45/290 (15%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-GK--DPEGLFPCIL 67
+AV L +E + P+ EV +++ + +C +D + + G+ D P ++
Sbjct: 6 LSAV-LYKQNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHEA+G V VG+ V ++ GD V CR C+FCK GK NLC +
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLT---------- 114
Query: 128 DRKSRFSINGKPIYHFMGTS----TFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGVP 180
F T ++Y V K+ L++ L L GV
Sbjct: 115 ---------------FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGV- 158
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG- 239
A A V+ G+ V V G G +GL AKA GA V+ P++ + AKN G
Sbjct: 159 ---HAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGA 213
Query: 240 -VTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
VT V+P + I + + + + +C GN + +
Sbjct: 214 DVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT 263
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357 | Back alignment and structure |
|---|
Score = 158 bits (401), Expect = 3e-46
Identities = 49/289 (16%), Positives = 93/289 (32%), Gaps = 41/289 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCIL 67
KA V+ + P++GE ++ L +C TD +G PEG +L
Sbjct: 2 KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVL 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV--IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
GHEA G+V V TE++ GD V ++ + + ++ V
Sbjct: 62 GHEAVGVV--VDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVG 119
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL---LGCGV-PT 181
+G S++ + + +I P++ + L +
Sbjct: 120 A---------HG----------YMSEFFTSPEKYLVRI-PRSQAELGFLIEPISITEKAL 159
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKA--AGASRVIGI---DIDPKKFDRAK 236
+A S V G G++GL K G + + D D +
Sbjct: 160 EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE 219
Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 285
T + + + + V +D+ +E G +++
Sbjct: 220 ELDATYVDSRQTPVEDVPDVY-----EQMDFIYEATGFPKHAIQSVQAL 263
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366 | Back alignment and structure |
|---|
Score = 155 bits (393), Expect = 4e-45
Identities = 51/293 (17%), Positives = 96/293 (32%), Gaps = 44/293 (15%)
Query: 11 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKD-----PEGLFP 64
KA + PN + ++DV G+++I+ ++ +C D +GK P+G
Sbjct: 2 KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDF 61
Query: 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
+LGHEA G+VE G GD V+P + C C+ C G+ + C AG+
Sbjct: 62 LVLGHEAIGVVEESYHGF---SQGDLVMPVNRRGCGICRNCLVGRPDFCETGEF-GEAGI 117
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGVPT- 181
D G ++ + KI + L +
Sbjct: 118 HKMD----------------GF--MREWWYDDPKYLVKIPKSIEDIGILAQPLADIEKSI 159
Query: 182 --------GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233
+ V V G G +G+ + G + +P + +
Sbjct: 160 EEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVE 219
Query: 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG-NVSVMRAALECC 285
+ N + ++ + G D + G +V+++ +
Sbjct: 220 QTVIEETK--TNYYNSSNGYDKLKDSV--GKFDVIIDATGADVNILGNVIPLL 268
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398 | Back alignment and structure |
|---|
Score = 137 bits (347), Expect = 5e-38
Identities = 63/306 (20%), Positives = 114/306 (37%), Gaps = 50/306 (16%)
Query: 13 AVAWEPNKPLVIEDVQ----VAP--PQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFP 64
+V + + L +E V V +K++ T +C +D + + G+ +G
Sbjct: 5 SVVYHGTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFIVPKGH-- 62
Query: 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGA 122
+LGHE G V G V + GD V + C C+ CK ++++C V
Sbjct: 63 -VLGHEITGEVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADL 121
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKI----DPQAPLDKVCLLG 176
G G + + G ++Y +V D + K + + L+
Sbjct: 122 G-----------AFGFDLKGWSGGQ--AEYVLVPYADYMLLKFGDKEQAMEKIKDLTLIS 168
Query: 177 CGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
+PTG + A V+PGS V + G G VG A GA+ GA+ VI D +P++
Sbjct: 169 DILPTGFHGCVS-AGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227
Query: 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG--------------NVSVMRAA 281
+ G ++ ++ Q+ + VD + +G + +
Sbjct: 228 DAGFET-IDLRNSAPLRDQID-QILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSL 285
Query: 282 LECCHK 287
+
Sbjct: 286 FDVVRA 291
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398 | Back alignment and structure |
|---|
Score = 134 bits (340), Expect = 6e-37
Identities = 73/279 (26%), Positives = 109/279 (39%), Gaps = 38/279 (13%)
Query: 13 AVAWEPNKPLVIEDVQVA-------PPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLF 63
V + + + ++ + V +K++ T +C +D + G+ GL
Sbjct: 5 GVVYLGSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVGL- 63
Query: 64 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
+LGHE G V G V +Q GD V + C C+ CK T +C V A G
Sbjct: 64 --VLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 121
Query: 124 VMMNDRKSRFSINGKPIYHFMGTSTFSQ--YTVVH--DVSVAKI----DPQAPLDKVCLL 175
G Y MG T Q Y +V D ++ K+ + + L
Sbjct: 122 -----------AYG---YVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEKIRDLTCL 167
Query: 176 GCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
+PTG A V PGS V V G G VGLA A A+ GA+ VI D++P + A
Sbjct: 168 SDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA 226
Query: 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
K G + +Q+ L VD + + +G
Sbjct: 227 KAQGFEI-ADLSLDTPLHEQIA-ALLGEPEVDCAVDAVG 263
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 9e-33
Identities = 70/257 (27%), Positives = 109/257 (42%), Gaps = 32/257 (12%)
Query: 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
+ + KA A+ +PL D+ P +V+I+I + +CH+D + + +
Sbjct: 16 YKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTV 75
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATG 121
+PC+ GHE G V +VG+ V + PGD V + C C+ C+ C+ G N C
Sbjct: 76 YPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYC-------- 127
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKI-DPQAPLDKVCLLGC 177
+ N T +SQ VVH+ V +I PQ L V L C
Sbjct: 128 -------DHMTGTYNSP--TPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC 178
Query: 178 GVPTGLGAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFD 233
T ++ + PG V V G+G +G + + + A A GA V+ K +
Sbjct: 179 AGIT----TYSPLRHWQAGPGKKVGVVGIGGLGHMGI-KLAHAMGA-HVVAFTTSEAKRE 232
Query: 234 RAKNFGVTEFVNPKDHD 250
AK G E VN ++ D
Sbjct: 233 AAKALGADEVVNSRNAD 249
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 3e-30
Identities = 73/270 (27%), Positives = 108/270 (40%), Gaps = 34/270 (12%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCIL 67
+A V P L + D+ V P EVR+++ AL H D + G L P +L
Sbjct: 2 RAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVL 61
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLC--GKVRGATGAGVM 125
G + +G+V++VG GV PGD V+ C C+ C +G+ NLC ++ G G
Sbjct: 62 GADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHG-- 119
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGA 185
T+++Y V+ + ++A ++ + T
Sbjct: 120 ----------------------TYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQM 157
Query: 186 VWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
V + V PG V V V +A + AK GA RVI K RAK G E V
Sbjct: 158 VVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETV 216
Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
N D + + LT G G D + G
Sbjct: 217 NYTHPD--WPKEVRRLTGGKGADKVVDHTG 244
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 8e-30
Identities = 69/249 (27%), Positives = 107/249 (42%), Gaps = 30/249 (12%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ K + ++ D +V I IL+ +CH+D ++ + EG++P I
Sbjct: 3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIP 62
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE AGI++ VG+GV + + GD V + C+ C+ CK CK + C
Sbjct: 63 GHEIAGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFC------------- 109
Query: 127 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGL 183
K F+ + +H +S VV + V +D APL+KV L C T
Sbjct: 110 --TKVVFTYDCLDSFH-DNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGIT-- 164
Query: 184 GAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
++ +KV G+ V V G G +G +AV + A A GA V + K A + G
Sbjct: 165 --TYSPLKFSKVTKGTKVGVAGFGGLGSMAV-KYAVAMGA-EVSVFARNEHKKQDALSMG 220
Query: 240 VTEFVNPKD 248
V F
Sbjct: 221 VKHFYTDPK 229
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 1e-29
Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ A + + L + +VR K+L+ +CH+D ++ ++P +
Sbjct: 15 VKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVP 74
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE G V VG V +V GD V + C C C+ C + N C
Sbjct: 75 GHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYC------------- 121
Query: 127 NDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLGC-GVPT- 181
K + + GT T +S + V ++ + + PLD L C G+
Sbjct: 122 --PKMILTYASI---YHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVY 176
Query: 182 ------GLGAVWNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKKFDR 234
GL EPG + + GLG +G +AV + AKA G+ +V I P K +
Sbjct: 177 SPLKYFGLD--------EPGKHIGIVGLGGLGHVAV-KFAKAFGS-KVTVISTSPSKKEE 226
Query: 235 A-KNFGVTEFVNPKDHD 250
A KNFG F+ +D +
Sbjct: 227 ALKNFGADSFLVSRDQE 243
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357 | Back alignment and structure |
|---|
Score = 111 bits (279), Expect = 2e-28
Identities = 65/262 (24%), Positives = 96/262 (36%), Gaps = 38/262 (14%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
M A +P+ L + +V I+I+ +CHTD +
Sbjct: 1 MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60
Query: 61 GLFPCILGHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGA 119
+P + GHE G V VG V++ GD V + C C C C+ C
Sbjct: 61 SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYC------ 114
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLLG 176
K +S N + G T F++ TVVH V KI +++ L
Sbjct: 115 ---------PKKIWSYNDV---YINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLL 162
Query: 177 CGVPTGLGAV------WNTAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDP 229
C T V + + PG + GLG VG + V + AKA G V I
Sbjct: 163 CAGVT----VYSPLSHFGLKQ--PGLRGGILGLGGVGHMGV-KIAKAMGH-HVTVISSSN 214
Query: 230 KKFDRA-KNFGVTEFVNPKDHD 250
KK + A ++ G ++V D
Sbjct: 215 KKREEALQDLGADDYVIGSDQA 236
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-27
Identities = 45/294 (15%), Positives = 93/294 (31%), Gaps = 60/294 (20%)
Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG--------------- 61
+ K L + +V + EV + ++ +++ + ++ +
Sbjct: 45 DVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWAT 104
Query: 62 ---LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118
+LG + +G+V G GV +PGDHVI + A E + G L + R
Sbjct: 105 RHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVI-VHPAHVDEQEPATHGDGMLGTEQRA 163
Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
G ++Y VV + ++ +
Sbjct: 164 WGFETN-----------FG----------GLAEYGVVRASQLLPKPAHLTWEEAAVSPLC 202
Query: 179 VPTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
T + A+++ G IV ++G G +G + K G + + +K
Sbjct: 203 AGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGG-IPVAVVSSAQKEAAV 261
Query: 236 KNFGVTEFVNPKDHD----------------KPIQQVLVDLTDGGVDYSFECIG 273
+ G +N + + + +++V+ D FE G
Sbjct: 262 RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTG 315
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-27
Identities = 59/254 (23%), Positives = 92/254 (36%), Gaps = 30/254 (11%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-FPCILGHEAAGIVESVGE 80
L + + V ++ ++ L +L + D L FP + + +G+VE+VG+
Sbjct: 41 LKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGK 100
Query: 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
VT +PGD VI + + +G+T + G GV
Sbjct: 101 SVTRFRPGDRVISTFAPGWLDGLRPGTGRTPA-YETLGGAHPGV---------------- 143
Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200
S+Y V+ + + L C T A+ + G V V
Sbjct: 144 --------LSEYVVLPEGWFVAAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVV 195
Query: 201 FGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDL 260
G G V L + AKA GA VI +K DRA G +N + D + + L
Sbjct: 196 QGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGADHGINRLEED--WVERVYAL 252
Query: 261 TDG-GVDYSFECIG 273
T G D+ E G
Sbjct: 253 TGDRGADHILEIAG 266
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 3e-26
Identities = 54/266 (20%), Positives = 95/266 (35%), Gaps = 62/266 (23%)
Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK---DPEGLFPCILGHEAAG 73
+P K + ++++++A + +VR+K+L + +D G PE P + G+E
Sbjct: 37 DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPE--LPAVGGNEGVA 94
Query: 74 IVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRF 133
V +VG VT ++PGD VIP
Sbjct: 95 QVVAVGSNVTGLKPGDWVIPA--------------------------------------- 115
Query: 134 SINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE 193
G T+ V + ++ ++ PL LG T + + +++
Sbjct: 116 ---------NAGLGTWRTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQ 166
Query: 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI----DIDPKKFDRAKNFGVTEFVNPKD 248
PG V VG AV + A A G R I + K DR K+ G + ++
Sbjct: 167 PGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLKSLGAEHVITEEE 225
Query: 249 HDKPIQQVLVDLTDG-GVDYSFECIG 273
+P ++ D + C+G
Sbjct: 226 LRRP--EMKNFFKDMPQPRLALNCVG 249
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 3e-25
Identities = 55/257 (21%), Positives = 89/257 (34%), Gaps = 34/257 (13%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
MS + A + E K P ++ IKI +C +D + +G
Sbjct: 1 MSYPEKF-EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGN 59
Query: 61 GLFPCILGHEAAGIVESVGEGV-TEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRG 118
P ++GHE G V +G + ++ G V + C EC CK+ C
Sbjct: 60 MKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYC----- 114
Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTST---FSQYTVVHDVSVAKIDPQAPLDKVCLL 175
K + + + G + ++ Y VH+ V I P L
Sbjct: 115 ----------TKFVTTYSQP---YEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPL 161
Query: 176 GCGVPTGLGAVWN---TAKVEPGSIVAVFGLGTVG-LAVAEGAKAAGASRVIGIDIDPKK 231
CG T V++ PG V + GLG +G + +KA GA I +K
Sbjct: 162 LCGGLT----VYSPLVRNGCGPGKKVGIVGLGGIGSMGT-LISKAMGA-ETYVISRSSRK 215
Query: 232 FDRAKNFGVTEFVNPKD 248
+ A G ++ +
Sbjct: 216 REDAMKMGADHYIATLE 232
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 101 bits (253), Expect = 8e-25
Identities = 53/294 (18%), Positives = 83/294 (28%), Gaps = 61/294 (20%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
A + ++ V +V +++ A+ +D S + LG +
Sbjct: 13 TALTVNDHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSD---TSMRGQFATPWAFLGTD 69
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
AG V +VG VT +Q GD V G
Sbjct: 70 YAGTVVAVGSDVTHIQVGDRV---------------------YGAQNEMCP--------- 99
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT--------- 181
FSQYTV AKI ++ L G+ T
Sbjct: 100 -----------RTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLG 148
Query: 182 -GLGAVWNTAKVEPGSIVAVF---GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
L + V V G + + +G I P FD AK+
Sbjct: 149 LPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIAT-CSPHNFDLAKS 206
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291
G E + + + + Q + T + Y+ +CI NV + G
Sbjct: 207 RGAEEVFDYRAPN--LAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGH 258
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-24
Identities = 48/312 (15%), Positives = 92/312 (29%), Gaps = 63/312 (20%)
Query: 2 STEGQVITCKAAVAWE---PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK- 57
+ A + P K + ++DV V GE + ++ +++ + +T +
Sbjct: 35 TVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEP 94
Query: 58 -----------------DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECR 100
L ++G + AG+V G GV Q GD V+ +
Sbjct: 95 LSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVEL 154
Query: 101 ECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160
E + + G ++ +V +
Sbjct: 155 ESSDG--HNDTMLDPEQRIWGFE--------------------TNFGGLAEIALVKSNQL 192
Query: 161 AKIDPQAPLDKVCLLGCGVPTGLGAV--WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA 217
++ G T + N A ++ G V ++G G +G + A A
Sbjct: 193 MPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAG 252
Query: 218 GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV---------------DLTD 262
GA I + P+K + + G ++ + +LT
Sbjct: 253 GA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTG 311
Query: 263 G-GVDYSFECIG 273
G +D FE G
Sbjct: 312 GEDIDIVFEHPG 323
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 95.7 bits (239), Expect = 5e-23
Identities = 49/276 (17%), Positives = 89/276 (32%), Gaps = 57/276 (20%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK-DP 59
MS G++I P L +E + P + EV +++L + +D +G
Sbjct: 1 MSLHGKLIQFHKF--GNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAH 58
Query: 60 EGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA 119
P I G+E GIVE+VG V+ G V+P
Sbjct: 59 RIPLPNIPGYEGVGIVENVGAFVSRELIGKRVLP-------------------------L 93
Query: 120 TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
G G T+ +Y V I +
Sbjct: 94 RGEG------------------------TWQEYVKTSADFVVPIPDSIDDFTAAQMYINP 129
Query: 180 PTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238
T T ++ ++ V +G A+ ++ R+I + + K +
Sbjct: 130 LTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRL 188
Query: 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
G ++ + + +++LT+G G D + + IG
Sbjct: 189 GAAYVIDTSTAP--LYETVMELTNGIGADAAIDSIG 222
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 3e-21
Identities = 55/270 (20%), Positives = 91/270 (33%), Gaps = 64/270 (23%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
L + A P E++++ + D Y SG P P LG EAAGIV VG G
Sbjct: 16 LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG 75
Query: 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
V ++ GD V +Y
Sbjct: 76 VKHIKAGDRV------------------------------------------------VY 87
Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGCGVPTGLGA---VWNTAKVEPGS 196
+S + A + ++ L GL + T +++P
Sbjct: 88 AQSALGAYSSVHNIIADKAAILPAAISFEQAAASFL-----KGLTVYYLLRKTYEIKPDE 142
Query: 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
G VGL + AKA GA ++IG +K A G + +N ++ D ++
Sbjct: 143 QFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVINYREEDLV-ER 200
Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
+ ++T G V ++ +G +L+C
Sbjct: 201 LK-EITGGKKVRVVYDSVGR-DTWERSLDC 228
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 89.6 bits (223), Expect = 8e-21
Identities = 62/270 (22%), Positives = 97/270 (35%), Gaps = 64/270 (23%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
L D + P V ++ L D Y SG P P LG E AG+VE+VG+
Sbjct: 16 LEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDE 75
Query: 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
VT + GD V Y
Sbjct: 76 VTRFKVGDRV------------------------------------------------AY 87
Query: 142 HFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV--CLLGCGVPTGLGA---VWNTAKVEPGS 196
+S+ V+ + ++ K+ ++ +L GL + T +V+PG
Sbjct: 88 GTGPLGAYSEVHVLPEANLVKLADSVSFEQAAALML-----KGLTVQYLLRQTYQVKPGE 142
Query: 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
I+ G VG + AKA GA ++IG P+K AK G E ++ D ++
Sbjct: 143 IILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDYSHEDVA-KR 200
Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
VL +LTDG ++ +G +L+
Sbjct: 201 VL-ELTDGKKCPVVYDGVGQ-DTWLTSLDS 228
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 5e-20
Identities = 66/270 (24%), Positives = 99/270 (36%), Gaps = 63/270 (23%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
+ ED V E+ IK +T + + ++Y G P P +LG EA+G V + G+G
Sbjct: 23 IKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYPCEK-PYVLGREASGTVVAKGKG 81
Query: 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIY 141
VT + GD V
Sbjct: 82 VTNFEVGDQVA------------------------------------------------- 92
Query: 142 HFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT-GLGA---VWNTAKVEPGS 196
++ STF+QY+ + V K+ P+ D+ L L A V+ G
Sbjct: 93 -YISNSTFAQYSKISSQGPVMKL-PKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGD 150
Query: 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
V +F G VGL + + K GA I + +K AK +G +N D +Q
Sbjct: 151 YVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKEYGAEYLINASKEDIL-RQ 208
Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
VL T+G GVD SF+ +G +L
Sbjct: 209 VL-KFTNGKGVDASFDSVGK-DTFEISLAA 236
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 87.1 bits (216), Expect = 7e-20
Identities = 41/303 (13%), Positives = 83/303 (27%), Gaps = 85/303 (28%)
Query: 7 VITCKAAVAWE---PNKPLVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGK---- 57
+IT +A + + P L + ++ EV +K L + + +D G
Sbjct: 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60
Query: 58 ------DPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTN 111
G+E V VG V+ ++ GD VIP
Sbjct: 61 PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPS----------------- 103
Query: 112 LCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA---- 167
+ T+ + + +D K+ A
Sbjct: 104 -------------------------------HVNFGTWRTHALGNDDDFIKLPNPAQSKA 132
Query: 168 -------PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAG 218
+++ + T + + K+ PG + G VG ++ K
Sbjct: 133 NGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN 192
Query: 219 ASRVIGI----DIDPKKFDRAKNFGVTEFVNPKDHD-KPIQQVLVDLTD---GGVDYSFE 270
I + + K G T+ + ++ + + + G +
Sbjct: 193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALN 251
Query: 271 CIG 273
C+G
Sbjct: 252 CVG 254
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 9e-19
Identities = 62/273 (22%), Positives = 98/273 (35%), Gaps = 65/273 (23%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---KDPEGLFPCILGHEAAGIVESV 78
V E+V+V P G+VR++ + D Y +G G P ++G EAA +VE V
Sbjct: 16 FVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEV 75
Query: 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGK 138
G GVT+ G+ V
Sbjct: 76 GPGVTDFTVGERV----------------------------------------------- 88
Query: 139 PIYHFMGTSTFSQYTVVHDVSVAKI-----DPQAPLDKVCLLGCGVPTGLGAVWNTAKVE 193
+SQ + + K+ L + L G T + T KV+
Sbjct: 89 -CTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLMLKGM---TAQYLLHQTHKVK 144
Query: 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKP 252
PG V + G +G + A+ GA VIG +K + A+ G +N D
Sbjct: 145 PGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCHHTINYSTQDFA 203
Query: 253 IQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
+ V ++T G GVD ++ IG ++ +L+C
Sbjct: 204 -EVVR-EITGGKGVDVVYDSIGK-DTLQKSLDC 233
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 79.9 bits (198), Expect = 3e-17
Identities = 55/281 (19%), Positives = 89/281 (31%), Gaps = 62/281 (22%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
KA A + P LV DV+ V + + +C D G+ P +
Sbjct: 23 KAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEP-PFV 81
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
G E AG+V S EG + ++PGD V+ G
Sbjct: 82 PGIETAGVVRSAPEG-SGIKPGDRVM-------------------------AFNFIG--- 112
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+++ V ++ PQ + L T A
Sbjct: 113 ---------------------GYAERVAVAPSNILPTPPQLDDAEAVALIANYHTMYFAY 151
Query: 187 WNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245
++ G V V G G +G A + AK GA +VI + + K+ G +
Sbjct: 152 ARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGADIVLP 210
Query: 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECC 285
++ + + + T G GVD + IG A+
Sbjct: 211 ---LEEGWAKAVREATGGAGVDMVVDPIGG-PAFDDAVRTL 247
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 79.6 bits (197), Expect = 3e-17
Identities = 47/287 (16%), Positives = 82/287 (28%), Gaps = 80/287 (27%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-----EGLF 63
KA + P L + D + ++ IK+ +L D T +G +
Sbjct: 8 KAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNL 67
Query: 64 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
P LG++ +G V +G V V GD V G
Sbjct: 68 PSGLGYDFSGEVIELGSDVNNVNIGDKV---------------------MGIAGFPDHPC 106
Query: 124 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGC 177
+++Y ++ + QA
Sbjct: 107 ------------------------CYAEYVCASPDTIIQK-LEKLSFLQA---------A 132
Query: 178 GVPTGLGAVWN---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233
+PT A+V+ G +V + G VG + AK G VI +
Sbjct: 133 SLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHA 190
Query: 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRA 280
K G + +N + D + VD + +G +++
Sbjct: 191 FLKALGAEQCINYHEED------FLLAISTPVDAVIDLVGGDVGIQS 231
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 77.3 bits (191), Expect = 2e-16
Identities = 35/277 (12%), Positives = 68/277 (24%), Gaps = 62/277 (22%)
Query: 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGL 62
G T + L + V P +V IK+ ++ +D G+ P
Sbjct: 20 GYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVK 79
Query: 63 FPCILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
G E G + + G+ + G V G +
Sbjct: 80 -GRPAGFEGVGTIVAGGDEPYAKSLVGKRVAF----------------------ATGLSN 116
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
G ++++Y V + + + G +
Sbjct: 117 WG------------------------SWAEYAVAEAAACIPLLDTVRDED----GAAMIV 148
Query: 182 GLGAVWN---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237
K E + + + AK G R I ++ K+
Sbjct: 149 NPLTAIAMFDIVKQEGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKD 207
Query: 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
G +N K D + L ++ + +
Sbjct: 208 IGAAHVLNEKAPD--FEATLREVMKAEQPRIFLDAVT 242
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 3e-16
Identities = 59/280 (21%), Positives = 91/280 (32%), Gaps = 80/280 (28%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--KDPEGLFPCILG 68
AAV E N P V+ + P G+V ++I + DA +G + P ILG
Sbjct: 9 IAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILG 68
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
+ AG V +VG V + GD V G G G
Sbjct: 69 MDLAGTVVAVGPEVDSFRVGDAV---------------------FGLTGGVGGLQ----- 102
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP------QAPLDKVCLLGCGVPTG 182
T +Q+ V +A P QA +P
Sbjct: 103 ------------------GTHAQFAAVDARLLASK-PAALTMRQA---------SVLPLV 134
Query: 183 LGAVW----NTAKVEPGSIVAVF----GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
W + A+V+ G V + G+G V + + A A GA RV +
Sbjct: 135 FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQI---ALARGA-RVFATA-RGSDLEY 189
Query: 235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
++ G T ++ + + T G G D ++ +G
Sbjct: 190 VRDLGATPIDASREPE----DYAAEHTAGQGFDLVYDTLG 225
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 76.8 bits (190), Expect = 3e-16
Identities = 50/270 (18%), Positives = 92/270 (34%), Gaps = 65/270 (24%)
Query: 23 VIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILGHEAAGIVESVGE 80
+ D+ V P+ +V IK+ + + Y SG L P G + AG++E+VG+
Sbjct: 46 LRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLL-PYTPGSDVAGVIEAVGD 104
Query: 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPI 140
+ + GD V G
Sbjct: 105 NASAFKKGDRVF--------------------TSSTIS--GG------------------ 124
Query: 141 YHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW----NTAKVEPGS 196
+++Y + D +V K+ + + G + + ++A V+ G
Sbjct: 125 --------YAEYALAADHTVYKLPEKLDFKQ----GAAIGIPYFTAYRALIHSACVKAGE 172
Query: 197 IVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQ 255
V V G G VGLA + A+A G +++G + G E N ++ +
Sbjct: 173 SVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFNHREVN--YID 229
Query: 256 VLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
+ G+D E + NV++ + L
Sbjct: 230 KIKKYVGEKGIDIIIEMLANVNLSK-DLSL 258
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 76.5 bits (189), Expect = 3e-16
Identities = 49/289 (16%), Positives = 84/289 (29%), Gaps = 63/289 (21%)
Query: 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE 60
+ Q + + D V P G++ ++ F + +D +G+
Sbjct: 20 FQSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDP 79
Query: 61 G-LFPCILGHEAAGIVESVGEGVTE-VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRG 118
P +G E G V ++G + G V
Sbjct: 80 SVKPPFDIGFEGIGEVVALGLSASARYTVGQAVA-------------------------- 113
Query: 119 ATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCG 178
+M +F++YTVV + P L
Sbjct: 114 ------------------------YMAPGSFAEYTVVPASIATPVPSVKPE----YLTLL 145
Query: 179 VP--TGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235
V T ++ + G V V G G + +K A VIG +K
Sbjct: 146 VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFL 204
Query: 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
K+ G +N K + VL GVD +E +G ++ A++
Sbjct: 205 KSLGCDRPINYKTEP--VGTVLKQEYPEGVDVVYESVGG-AMFDLAVDA 250
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-14
Identities = 33/282 (11%), Positives = 61/282 (21%), Gaps = 95/282 (33%)
Query: 11 KAAVAWE---PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ W + + V + A ++ ++ + D +
Sbjct: 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVP 62
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
G + AG++ VG V G V
Sbjct: 63 GVDGAGVIVKVGAKVDSKMLGRRVA----------------------------YHT---- 90
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQA---PLDKVCLLGCGV 179
+G +F+++TV++ V + +A P
Sbjct: 91 ----SLKRHG----------SFAEFTVLNTDRVMTLPDNLSFERAAALPC---------- 126
Query: 180 PTGLGAVW---NTAKVEPGSIVAVFGLGTVG-----LAVAEGAKAAGASRVIGIDIDPKK 231
L A W + V + G G V + G S
Sbjct: 127 -PLLTA-WQAFEKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVSA-------SLS 177
Query: 232 FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
A GV + Q F+ +
Sbjct: 178 QALAAKRGVRHLY---REPSQVTQ--------KYFAIFDAVN 208
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 71.5 bits (176), Expect = 2e-14
Identities = 50/272 (18%), Positives = 81/272 (29%), Gaps = 68/272 (25%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
+A V L + + PQ GE++I++ L D G +P P +
Sbjct: 5 RAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKT-PLV 63
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
G E +GIVE++G+ V + GD V V A
Sbjct: 64 PGFECSGIVEALGDSVKGYEIGDRV---------------------MAFVNY--NA---- 96
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+++ V KI + P
Sbjct: 97 ----------------------WAEVVCTPVEFVYKIPDDMSFSE----AAAFPMNFVTA 130
Query: 187 WN----TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
+ A + G V V G VG AVA+ V G K + K+
Sbjct: 131 YVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTASTFKH-EAIKDSV-- 187
Query: 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
+ ++ D Q + ++ GVD +C+
Sbjct: 188 THLFDRNAD--YVQEVKRISAEGVDIVLDCLC 217
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 70.7 bits (173), Expect = 4e-14
Identities = 41/297 (13%), Positives = 72/297 (24%), Gaps = 90/297 (30%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG--------------------KDPEG 61
L ++ + P EV I+I + L +D G + PEG
Sbjct: 20 LSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEG 79
Query: 62 LF---------PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNL 112
+G+E AG+V G +
Sbjct: 80 AMRSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAA------------------ 121
Query: 113 CGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKV 172
+G + +SQY + + A
Sbjct: 122 -------------------------------IGGAMYSQYRCIPADQCLVLPEGATPAD- 149
Query: 173 CLLGCGVPTGLGAVWN---TAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228
G T ++E S + +G + + G +++ I
Sbjct: 150 ---GASSFVNPLTALGMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRK 205
Query: 229 PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALEC 284
++ D K G N Q L + G +F+ G + L C
Sbjct: 206 QEQADLLKAQGAVHVCNAASPT--FMQDLTEALVSTGATIAFDATGGGKLGGQILTC 260
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-13
Identities = 53/273 (19%), Positives = 83/273 (30%), Gaps = 68/273 (24%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
+ P +VI + GEV ++ + D G P+ I
Sbjct: 30 RFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDA-SPI 88
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LG E +G + VG GV+ GD V CG G GA
Sbjct: 89 LGLELSGEIVGVGPGVSGYAVGDKV---------------------CGLANG--GA---- 121
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----TG 182
+++Y ++ + K +P T
Sbjct: 122 ----------------------YAEYCLLPAGQILPFPKGYDAVK----AAALPETFFTV 155
Query: 183 LGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
++ A + G V + G GT +G + A+A GA V K + + G
Sbjct: 156 WANLFQMAGLTEGESVLIHG-GTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERLGA 213
Query: 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
+N + D V+ T GVD + IG
Sbjct: 214 KRGINYRSED--FAAVIKAETGQGVDIILDMIG 244
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 62.0 bits (151), Expect = 4e-11
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 17 EPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVE 76
+ L+ ++ P ++ +++ ++ D P+G ++G++AAGIV
Sbjct: 35 TDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVS 94
Query: 77 SVGEGVTEVQPGDHV 91
+VG VT +PGD V
Sbjct: 95 AVGPDVTLFRPGDEV 109
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 60.7 bits (148), Expect = 1e-10
Identities = 60/275 (21%), Positives = 88/275 (32%), Gaps = 70/275 (25%)
Query: 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCI 66
A +P P L +++V P GEV +K+ +AL D G+ P G I
Sbjct: 24 LAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGA-SNI 82
Query: 67 LGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVM 125
LG EA+G V +G G + GD + G G
Sbjct: 83 LGLEASGHVAELGPGCQGHWKIGDTA---------------------MALLPG--GG--- 116
Query: 126 MNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVP----T 181
+QY V + + I L + +P T
Sbjct: 117 -----------------------QAQYVTVPEGLLMPIPEGLTLTQ----AAAIPEAWLT 149
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
+ V+ G V + G VG A + + AGA + KK A+ G
Sbjct: 150 AFQLLHLVGNVQAGDYVLIHA-GLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLG 207
Query: 240 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
N K D + + T G GV+ +CIG
Sbjct: 208 AAAGFNYKKED--FSEATLKFTKGAGVNLILDCIG 240
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 3e-10
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 8 ITCKAAVAWEP-----NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
++ KA +P ++ + P+ E+ +KI ++ D +
Sbjct: 1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMDVSK-- 58
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHV 91
P +LG +A G+VESVG VT GD V
Sbjct: 59 APRVLGFDAIGVVESVGNEVTMFNQGDIV 87
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 57.2 bits (139), Expect = 1e-09
Identities = 44/270 (16%), Positives = 68/270 (25%), Gaps = 80/270 (29%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGK--DPEGLFPCILG 68
KA V PL + D+ + GEV +++ L D G P I G
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHP-PFIPG 60
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
E G+VE G G
Sbjct: 61 MEVVGVVE-----------GRRYA-------------------------ALVPQG----- 79
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
++ V ++ + ++ P +
Sbjct: 80 -------------------GLAERVAVPKGALLPLPEGLSPEE----AAAFPVSFLTAYL 116
Query: 189 ---TAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244
A+ PG V V G +G A + A+A G RV+ P+K G E
Sbjct: 117 ALKRAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAA 175
Query: 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIG 273
+ + G+D E G
Sbjct: 176 TYAEVPE-------RAKAWGGLDLVLEVRG 198
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 1e-09
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
LV E AP GEVRI + + DA G P LG E AG+V G G
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPG---VASLGSEGAGVVVETGPG 282
Query: 82 VTEVQPGDHVI 92
VT + PGD V+
Sbjct: 283 VTGLAPGDRVM 293
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 57.0 bits (138), Expect = 2e-09
Identities = 49/303 (16%), Positives = 84/303 (27%), Gaps = 94/303 (31%)
Query: 11 KAAVAWEPNKPLVI---EDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---- 62
A V + K V+ +++ + EV +K+ ++ D SG L
Sbjct: 23 MAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKR 82
Query: 63 -----------FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTN 111
FP LG + +G+V G V +PGD V
Sbjct: 83 DPLHVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDEVWAAV---------------- 126
Query: 112 LCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI-----DPQ 166
G T S++ VV V+ Q
Sbjct: 127 ------PPWKQG------------------------TLSEFVVVSGNEVSHKPKSLTHTQ 156
Query: 167 APLDKVCLLGCGVP----TGLGAVWNTAKVEPGSIVA--VF---GLGTVGLAVAEGAKAA 217
A +P T A+ + + V G VG + KA
Sbjct: 157 A---------ASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAW 207
Query: 218 GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277
A V + + + G + ++ K +++ L L D+ + +G +
Sbjct: 208 DA-HVTAVC-SQDASELVRKLGADDVIDYKSGS--VEEQLKSL--KPFDFILDNVGGSTE 261
Query: 278 MRA 280
A
Sbjct: 262 TWA 264
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} Length = 118 | Back alignment and structure |
|---|
Score = 43.3 bits (102), Expect = 7e-06
Identities = 19/92 (20%), Positives = 30/92 (32%), Gaps = 7/92 (7%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-TEFVNPKDHDKPIQQV 256
+ V G G +G +A K + V D D GV T+ V+ KD + +
Sbjct: 8 ICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL 67
Query: 257 L-VDLTDGGVDYSFECIGNVSVMRAALEC-CH 286
D + + +AA H
Sbjct: 68 GGFDAVISAAPFFL----TPIIAKAAKAAGAH 95
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* Length = 144 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-05
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
AV GLG G ++ + G V+ +DI+ +K + ++
Sbjct: 9 FAVIGLGRFGGSIVKELHRMGHE-VLAVDINEEKVNAYASYA 49
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} Length = 141 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-05
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239
V G G+ + AAG +V+ +D +K + ++ G
Sbjct: 9 YIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEG 49
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 42.6 bits (101), Expect = 8e-05
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 15/142 (10%)
Query: 151 QYTVVHDVSVAKIDPQ-APLDKVCLLGC-GVP--TGLGAVWNTAKVEPGSIVAVF---GL 203
++ S+ K+DPQ LG G+P T L + + GS +
Sbjct: 111 TKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAA 170
Query: 204 GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTD 262
G G + G SRV+GI +K + G +N K + + + L +
Sbjct: 171 GACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDN--VAEQLRESCP 228
Query: 263 GGVDYSFECIGNV--SVMRAAL 282
GVD F+ NV ++ +
Sbjct: 229 AGVDVYFD---NVGGNISDTVI 247
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293 | Back alignment and structure |
|---|
Score = 41.5 bits (97), Expect = 2e-04
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
A+ +T G+ VAV GLG VG++VA A GA +V + R G+
Sbjct: 145 AIQHTDFTIHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGME 200
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* Length = 298 | Back alignment and structure |
|---|
Score = 40.6 bits (94), Expect = 4e-04
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236
+ G G G + L + G RV ++I+P + ++
Sbjct: 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSR 163
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} Length = 183 | Back alignment and structure |
|---|
Score = 39.4 bits (92), Expect = 5e-04
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
V + G+G +G + +A +GI+I + + ++ G
Sbjct: 42 VLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR 84
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} Length = 300 | Back alignment and structure |
|---|
Score = 39.8 bits (93), Expect = 6e-04
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243
A+ +T GS VAV GLG G+ +A A GA V R G+ F
Sbjct: 147 AIQHTDYTIHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLVPF 204
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* Length = 355 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241
G V V GLG VG ++A A AGA +++ D D ++ A G T
Sbjct: 175 GLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT 220
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 291 | |||
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.93 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.76 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 99.02 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.78 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.41 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.25 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.25 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.24 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.18 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.1 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.09 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.06 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.91 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.9 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 97.84 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 97.84 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.78 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.77 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.74 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 97.71 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.61 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.58 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.53 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 97.48 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.46 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 97.39 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.34 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 97.34 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.28 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 97.27 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 97.24 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 97.23 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 97.16 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 97.16 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.16 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.15 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 97.14 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 97.13 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.13 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.08 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.08 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.07 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.07 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.06 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.05 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.04 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.03 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 97.03 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 97.03 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.02 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.0 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.0 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 96.99 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.98 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 96.96 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 96.96 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 96.95 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 96.94 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 96.94 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 96.94 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 96.93 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 96.93 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 96.93 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 96.92 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 96.91 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 96.91 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 96.9 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 96.9 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 96.89 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 96.89 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.88 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 96.88 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 96.88 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 96.88 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 96.88 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 96.87 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 96.87 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 96.87 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 96.86 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 96.85 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 96.85 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 96.85 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 96.84 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 96.84 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 96.83 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 96.83 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 96.82 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.82 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 96.82 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.82 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.81 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 96.81 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 96.81 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 96.8 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 96.8 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 96.8 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 96.8 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 96.8 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 96.8 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.79 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 96.79 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 96.79 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 96.79 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 96.78 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 96.78 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 96.78 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 96.77 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 96.77 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 96.77 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 96.77 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 96.76 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 96.76 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 96.76 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 96.76 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 96.76 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 96.75 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 96.74 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 96.74 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 96.74 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 96.74 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 96.74 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 96.73 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 96.73 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 96.72 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 96.71 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 96.7 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 96.7 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 96.7 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.69 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 96.69 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 96.69 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 96.69 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.68 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 96.68 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.67 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 96.67 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.66 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 96.66 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 96.65 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.65 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 96.65 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 96.64 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.64 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 96.64 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 96.64 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 96.62 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 96.62 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.62 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 96.62 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.61 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 96.6 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 96.6 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 96.6 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 96.6 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.58 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 96.58 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 96.58 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 96.58 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 96.58 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 96.57 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 96.57 | |
| 1leh_A | 364 | Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi | 96.57 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 96.56 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 96.56 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 96.56 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 96.56 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.55 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 96.55 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 96.55 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 96.55 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.55 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 96.55 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 96.54 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.54 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 96.53 | |
| 1npy_A | 271 | Hypothetical shikimate 5-dehydrogenase-like protei | 96.53 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 96.52 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 96.52 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 96.52 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 96.51 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 96.51 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 96.51 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 96.5 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 96.5 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 96.5 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 96.49 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.49 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 96.49 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 96.48 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.47 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 96.47 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 96.47 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 96.45 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 96.45 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 96.44 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 96.44 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 96.44 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 96.43 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 96.43 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 96.43 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 96.42 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 96.42 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 96.41 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 96.41 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 96.41 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 96.39 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.38 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.38 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 96.38 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.37 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.36 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 96.36 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 96.35 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.35 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 96.34 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 96.34 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 96.33 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.33 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 96.33 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 96.32 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 96.32 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.31 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.3 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.3 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 96.29 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.29 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 96.29 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 96.29 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 96.29 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 96.28 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.25 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 96.24 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.24 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 96.23 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 96.21 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 96.21 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 96.19 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 96.18 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 96.18 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 96.18 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 96.17 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 96.15 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 96.15 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.15 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 96.13 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.13 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 96.13 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 96.12 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.11 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.1 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 96.09 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 96.07 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 96.05 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.05 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 96.02 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.02 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 96.01 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 96.01 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 95.99 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 95.99 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 95.99 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 95.99 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 95.98 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 95.98 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 95.98 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 95.97 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 95.97 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 95.96 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 95.96 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 95.96 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 95.94 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 95.93 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 95.92 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 95.92 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 95.9 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 95.9 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 95.89 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 95.88 | |
| 3ktd_A | 341 | Prephenate dehydrogenase; structural genomics, joi | 95.88 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 95.87 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 95.86 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 95.85 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 95.84 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 95.83 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 95.82 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 95.82 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 95.78 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 95.77 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 95.76 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 95.76 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 95.75 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 95.74 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 95.73 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 95.73 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 95.73 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 95.72 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 95.72 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 95.7 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 95.7 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 95.7 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 95.69 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 95.69 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 95.69 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 95.68 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 95.66 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 95.66 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 95.66 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 95.65 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 95.63 | |
| 1zej_A | 293 | HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural | 95.61 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 95.61 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 95.61 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 95.6 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 95.6 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 95.59 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 95.59 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 95.58 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 95.57 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 95.57 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 95.57 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 95.57 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 95.52 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 95.52 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 95.51 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 95.49 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 95.49 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 95.48 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 95.48 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 95.46 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 95.46 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 95.45 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 95.45 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 95.43 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 95.42 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 95.4 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 95.39 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.39 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 95.39 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 95.38 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 95.37 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 95.35 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 95.34 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 95.33 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 95.32 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 95.31 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 95.31 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 95.29 | |
| 1fbn_A | 230 | MJ fibrillarin homologue; MJ proteins, ribosomal R | 95.29 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 95.29 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 95.28 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 95.28 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 95.28 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 95.27 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 95.25 | |
| 2d5c_A | 263 | AROE, shikimate 5-dehydrogenase; substrate, dimer, | 95.24 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 95.22 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 95.22 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 95.21 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 95.21 | |
| 3dfz_A | 223 | SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase | 95.21 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 95.21 | |
| 1vl6_A | 388 | Malate oxidoreductase; TM0542, NAD-dependent malic | 95.21 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 95.18 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 95.17 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 95.15 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 95.09 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 95.07 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 95.06 | |
| 1ej0_A | 180 | FTSJ; methyltransferase, adoMet, adenosyl methioni | 95.05 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 95.04 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 95.03 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 95.03 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 95.03 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.02 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 95.02 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 95.0 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 95.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 94.99 | |
| 3m33_A | 226 | Uncharacterized protein; structural genomics, PSI- | 94.98 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 94.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 94.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 94.95 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 94.93 | |
| 3adn_A | 294 | Spermidine synthase; aminopropyltransferase, polya | 94.92 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 94.92 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 94.91 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 94.91 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 94.9 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 94.9 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 94.83 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 94.83 | |
| 1yqg_A | 263 | Pyrroline-5-carboxylate reductase; structural geno | 94.82 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 94.82 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 94.81 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 94.81 | |
| 2i7c_A | 283 | Spermidine synthase; transferase, structural genom | 94.78 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 94.77 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 94.77 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 94.76 | |
| 3lk7_A | 451 | UDP-N-acetylmuramoylalanine--D-glutamate ligase; a | 94.75 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 94.74 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 94.73 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 94.66 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 94.62 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 94.6 | |
| 3vh1_A | 598 | Ubiquitin-like modifier-activating enzyme ATG7; au | 94.59 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 94.59 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 94.58 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 94.58 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 94.57 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 94.55 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 94.53 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 94.52 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 94.51 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 94.5 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 94.48 | |
| 1iy9_A | 275 | Spermidine synthase; rossmann fold, structural gen | 94.47 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 94.46 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 94.45 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 94.45 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 94.42 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 94.42 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 94.42 | |
| 4e4t_A | 419 | Phosphoribosylaminoimidazole carboxylase, ATPase; | 94.41 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 94.35 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 94.35 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 94.33 | |
| 3kkj_A | 336 | Amine oxidase, flavin-containing; oxidoreductase, | 94.32 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 94.31 | |
| 1inl_A | 296 | Spermidine synthase; beta-barrel, rossman fold, st | 94.29 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 94.29 |
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-54 Score=397.27 Aligned_cols=284 Identities=93% Similarity=1.493 Sum_probs=262.6
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus 4 ~~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~ 83 (378)
T 3uko_A 4 GQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 83 (378)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred ccceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCc
Confidence 56789999999999988999999999999999999999999999999999998776789999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|++.+..+|+.|.+|++++.++|++.......|....+|..++..+|..++...+.|+|+||+.++.+.++++|
T Consensus 84 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 163 (378)
T 3uko_A 84 VQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKID 163 (378)
T ss_dssp CCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECC
Confidence 99999999999999999999999999999987654445555567777778888888878888999999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++
T Consensus 164 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi 243 (378)
T 3uko_A 164 PTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFV 243 (378)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTCCEEE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCcEEE
Confidence 99999999999999999999988889999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++.+.++.+.+++++++++|+||||+|.+..+..++++++++
T Consensus 244 ~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g 287 (378)
T 3uko_A 244 NPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKG 287 (378)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred ccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhcc
Confidence 98744467888999998889999999999988899999999985
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-52 Score=382.43 Aligned_cols=285 Identities=55% Similarity=0.946 Sum_probs=247.2
Q ss_pred CCCCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCC
Q 022865 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~ 80 (291)
|++...|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|+
T Consensus 1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~ 79 (373)
T 1p0f_A 1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA 79 (373)
T ss_dssp -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence 88888999999999999987799999999999999999999999999999999988765 56899999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
++++|++||+|++.+..+|+.|.+|+.++.++|++.....+.|+. .+|..++..+|...+++...|+|+||+.++.+.+
T Consensus 80 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 158 (373)
T 1p0f_A 80 GVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV 158 (373)
T ss_dssp TCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred CCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccc-cCCccccccCCcccccccCCccceeEEEEchhhE
Confidence 999999999999999999999999999999999986432111222 1222222222333333344579999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+++|++++++ |+++++++.|+|+++.+..++++|++|||+|+|++|++++|+||++|+.+|++++++++|+++++++|+
T Consensus 159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa 237 (373)
T 1p0f_A 159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA 237 (373)
T ss_dssp EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC
T ss_pred EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC
Confidence 9999999999 999999999999988888899999999999999999999999999999789999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++++++.+.++.+.+++++++++|+|||++|.+..+..++++|+++
T Consensus 238 ~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~ 285 (373)
T 1p0f_A 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCG 285 (373)
T ss_dssp SEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred cEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 999987642245778888888779999999999988899999999987
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-51 Score=375.09 Aligned_cols=283 Identities=70% Similarity=1.157 Sum_probs=244.6
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
+.|++|||+++.++++++++++++.|+|+++||||||++++||++|++++.|..+...+|.++|||++|+|+++|+++++
T Consensus 2 ~~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~ 81 (373)
T 2fzw_A 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK 81 (373)
T ss_dssp CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred CCccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCC
Confidence 56889999999999877999999999999999999999999999999999987665578999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||++.+..+|+.|.+|+.++.++|++.....+.|.. .+|..++..+|...+++...|+|+||+.++.+.++++|
T Consensus 82 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 160 (373)
T 2fzw_A 82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID 160 (373)
T ss_dssp CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccc-cCCcccccccccccccccCCccceeEEEEchhheEECC
Confidence 99999999999999999999999999999975321001111 12222222223333334445799999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|+++++
T Consensus 161 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi 240 (373)
T 2fzw_A 161 PLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECI 240 (373)
T ss_dssp TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEE
T ss_pred CCCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEe
Confidence 99999999999999999999888888999999999999999999999999999997899999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.+...++.+.+.+++++++|+|||++|....+..++++|+++
T Consensus 241 ~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 284 (373)
T 2fzw_A 241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKG 284 (373)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred ccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccC
Confidence 87642245778888888779999999999988899999999987
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-50 Score=371.36 Aligned_cols=282 Identities=56% Similarity=0.975 Sum_probs=243.1
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|..+.. +|.++|||++|+|+++|+++++
T Consensus 4 ~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G~V~~vG~~v~~ 82 (374)
T 2jhf_A 4 GKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAGIVESIGEGVTT 82 (374)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEEEEEEECTTCCS
T ss_pred CCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceEEEEEECCCCCC
Confidence 457899999999998779999999999999999999999999999999998876543 8999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||++.+..+|+.|.+|+.++.++|++.....+.|.. .+|..++..+|...+++...|+|+||+.++.+.++++|
T Consensus 83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP 161 (374)
T 2jhf_A 83 VRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKID 161 (374)
T ss_dssp CCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccc-cCCcccccccccccccccCCccCeeEEEEchHHeEECC
Confidence 99999999999999999999999999999986532111221 12212221222222333345799999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|+++++
T Consensus 162 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi 241 (374)
T 2jhf_A 162 AASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECV 241 (374)
T ss_dssp TTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEE
T ss_pred CCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCceEe
Confidence 99999999999999999999888888999999999999999999999999999997899999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++.+...++.+.+.+++++++|+|||++|.+..+..++++++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 285 (374)
T 2jhf_A 242 NPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEA 285 (374)
T ss_dssp CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTT
T ss_pred cccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcC
Confidence 87642245777888887779999999999988899999999987
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-50 Score=372.16 Aligned_cols=282 Identities=53% Similarity=0.983 Sum_probs=242.2
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
..|++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|. +...+|.++|||++|+|+++|+++++
T Consensus 4 ~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v~~ 82 (376)
T 1e3i_A 4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGVTN 82 (376)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred CCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCCcc
Confidence 45789999999999877999999999999999999999999999999999886 44468999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCcc----CCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVR----GATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~----~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
|++||||++.+..+|+.|.+|+.++.++|++.. ...+.|.. .+|..++..+|...+++...|+|+||+.++.+.+
T Consensus 83 ~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~ 161 (376)
T 1e3i_A 83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELM-EDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANL 161 (376)
T ss_dssp CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGE
T ss_pred CCCCCEEEECCcCCCCCCccccCCCcccCcCcCcccccccccccc-ccCccccccCCcccccccCCccceeEEEeccccE
Confidence 999999999999999999999999999999754 10001211 1221222222222333334579999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+++|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+
T Consensus 162 ~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa 241 (376)
T 1e3i_A 162 ARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA 241 (376)
T ss_dssp EECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC
T ss_pred EECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence 99999999999999999999999988888899999999999999999999999999999789999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++++.+.+.++.+.+.+++++++|+|||++|....+..++++++++
T Consensus 242 ~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~ 289 (376)
T 1e3i_A 242 TDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLG 289 (376)
T ss_dssp SEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTT
T ss_pred cEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcC
Confidence 999987642245778888888779999999999988899999999987
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-50 Score=370.90 Aligned_cols=282 Identities=61% Similarity=1.072 Sum_probs=243.8
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhh-hhcCCCCCCCCCcccccceeEEEEEeCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
.+|++|||+++.+++++++++++|.|+|+++||||||++++||++|++ ++.|..+ ..+|.++|||++|+|+++|++++
T Consensus 4 ~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~ 82 (374)
T 1cdo_A 4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVT 82 (374)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCC
T ss_pred CCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCc
Confidence 467899999999998789999999999999999999999999999999 8888665 56899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
+|++||||++.+..+|+.|.+|+.++.++|++.....+.|.. .+|..++..+|...+++...|+|+||+.++.+.++++
T Consensus 83 ~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~-~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~ 161 (374)
T 1cdo_A 83 EFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI 161 (374)
T ss_dssp SCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred cCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccc-cCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence 999999999999999999999999999999976432111221 1222222222333333334579999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
|+++++++|+++++++.|+|+++.+..++++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++++
T Consensus 162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~v 241 (374)
T 1cdo_A 162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDF 241 (374)
T ss_dssp CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEE
T ss_pred CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCceE
Confidence 99999999999999999999988788899999999999999999999999999999789999999999999999999999
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.+.+.++.+.+++++++++|+|||++|....+..++++|+++
T Consensus 242 i~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 286 (374)
T 1cdo_A 242 VNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKG 286 (374)
T ss_dssp ECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTT
T ss_pred EeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 987642245777888887779999999999988899999999987
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-50 Score=365.40 Aligned_cols=280 Identities=31% Similarity=0.590 Sum_probs=236.0
Q ss_pred CCCCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCC
Q 022865 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~ 80 (291)
||. +++|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|+
T Consensus 1 ms~---~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~ 76 (371)
T 1f8f_A 1 MSE---LKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGP 76 (371)
T ss_dssp ------CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECT
T ss_pred CCc---cccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCC
Confidence 565 56899999999887799999999999999999999999999999999988654 45799999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccc-cCCCce-ecccCCcceeeeEEeccc
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFS-INGKPI-YHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~-~~~~~~-~~~~~~g~~~~~~~~~~~ 158 (291)
++++|++||+|++.+ .+|+.|.+|+.++.++|++.......|.. .+|..++. .+|... ......|+|+||+.++.+
T Consensus 77 ~v~~~~~GdrV~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~ 154 (371)
T 1f8f_A 77 NVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSREN 154 (371)
T ss_dssp TCCSCCTTCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGG
T ss_pred CCCCCCCCCEEEecC-CCCCCChhhhCcCcccccccccccccccc-ccccccccccCCccccccccCCccccCeEEechh
Confidence 999999999999999 99999999999999999976411000100 11111110 001000 001234699999999999
Q ss_pred ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
.++++|+++++++|+.+++++.|+|+++.+..+++++++|||+|+|++|++++|+|+++|+.+|++++++++++++++++
T Consensus 155 ~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 155 NTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp GEEEECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred heEECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 99999999999999999999999999887888999999999999999999999999999997799999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|+++++++++ .++.+.+.+++++++|+|||++|.+..+..++++|+++
T Consensus 235 Ga~~vi~~~~--~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~ 282 (371)
T 1f8f_A 235 GATHVINSKT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGIL 282 (371)
T ss_dssp TCSEEEETTT--SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEE
T ss_pred CCCEEecCCc--cCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcC
Confidence 9999998875 56778888888779999999999988899999999998
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-49 Score=360.20 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=232.8
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
.|.+|||+++.+++. ++++++|.|+|++|||||||++++||++|++.+.|.+ ...+|.++|||++|+|+++|+++++|
T Consensus 20 ~p~~mkA~v~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G~V~~vG~~v~~~ 97 (370)
T 4ej6_A 20 FQSMMKAVRLESVGN-ISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCGIVVEAGSAVRDI 97 (370)
T ss_dssp -CCEEEEEEEEETTE-EEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEEEEEEECTTCCSS
T ss_pred cchheEEEEEecCCc-eEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEEEEEEECCCCCCC
Confidence 557899999999875 9999999999999999999999999999999999876 34689999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|++.+..+|+.|.+|..++.+.|.+... .|.. . .|+|+||+.++.+.++++|+
T Consensus 98 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~------------------~G~~aey~~v~~~~~~~~P~ 155 (370)
T 4ej6_A 98 APGARITGDPNISCGRCPQCQAGRVNLCRNLRA---IGIH-R------------------DGGFAEYVLVPRKQAFEIPL 155 (370)
T ss_dssp CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---BTTT-B------------------CCSSBSEEEEEGGGEEEECT
T ss_pred CCCCEEEECCCCCCCCChHHhCcCcccCCCccc---cCCC-C------------------CCcceEEEEEchhhEEECCC
Confidence 999999999999999999999999999998654 2222 2 34999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
++++++|+ +..++.|+|+++ +..++++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|++++++
T Consensus 156 ~~~~~~aa-l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 156 TLDPVHGA-FCEPLACCLHGV-DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGATATVD 233 (370)
T ss_dssp TSCTTGGG-GHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTCSEEEC
T ss_pred CCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCCEEEC
Confidence 99999998 556899999987 7889999999999999999999999999999988999999999999999999999999
Q ss_pred CCCCCchHHHHHHh---hcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHDKPIQQVLVD---LTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~~~~~~~v~~---~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+ .++.+.+.+ ++++++|+||||+|....+..++++|+++|
T Consensus 234 ~~~--~~~~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G 278 (370)
T 4ej6_A 234 PSA--GDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGG 278 (370)
T ss_dssp TTS--SCHHHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEE
T ss_pred CCC--cCHHHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCC
Confidence 876 567788887 777799999999999888999999999983
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-48 Score=354.55 Aligned_cols=254 Identities=29% Similarity=0.462 Sum_probs=231.1
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
+|||+++.+++++++++++|.|+|++|||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus 2 ~MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~v 81 (340)
T 3s2e_A 2 MMKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKE 81 (340)
T ss_dssp EEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCT
T ss_pred ceEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCC
Confidence 6999999998888999999999999999999999999999999999998764 468999999999999999999999999
Q ss_pred CCEEe-ecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 88 GDHVI-PCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 88 Gd~V~-~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
||+|+ ..+..+|+.|.+|..++.++|.+... .|+. .+ |+|+||+.++.+.++++|++
T Consensus 82 GdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~ 139 (340)
T 3s2e_A 82 GDRVGVPWLYSACGYCEHCLQGWETLCEKQQN---TGYS-VN------------------GGYGEYVVADPNYVGLLPDK 139 (340)
T ss_dssp TCEEEEESEEECCSSSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEECTTTSEECCTT
T ss_pred CCEEEecCCCCCCCCChHHhCcCcccCccccc---cCCC-CC------------------CcceeEEEechHHEEECCCC
Confidence 99994 56678999999999999999998654 2222 23 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++|+.+++++.|+|+++ +..++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++.++++
T Consensus 140 ~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~i~~ 217 (340)
T 3s2e_A 140 VGFVEIAPILCAGVTVYKGL-KVTDTRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAVNA 217 (340)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HTTTCCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHhhcccchhHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 99999999999999999987 67799999999999999999999999999999 99999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++ .++.+.+.+ +.+++|+|||++|....++.++++|+++|
T Consensus 218 ~~--~~~~~~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G 257 (340)
T 3s2e_A 218 RD--TDPAAWLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGG 257 (340)
T ss_dssp TT--SCHHHHHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEE
T ss_pred CC--cCHHHHHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCC
Confidence 76 567777777 44489999999999999999999999983
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-49 Score=357.50 Aligned_cols=254 Identities=29% Similarity=0.398 Sum_probs=224.3
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCC-CCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~ 80 (291)
..+.+|||+++.+++++++++++|.|+ |++|||||||++++||++|++++.|.++ ...+|.++|||++|+|+++|+
T Consensus 11 ~~~~~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~ 90 (359)
T 1h2b_A 11 LGVERLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAE 90 (359)
T ss_dssp ------CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECT
T ss_pred CChhhceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECC
Confidence 346789999999998779999999999 9999999999999999999999998764 346899999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
++++|++||+|+..+..+|+.|.+|+.++.++|++... .|+. .+ |+|+||+.++.+.+
T Consensus 91 ~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~ 148 (359)
T 1h2b_A 91 GVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLN-ID------------------GGFAEFMRTSHRSV 148 (359)
T ss_dssp TCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTT-BC------------------CSSBSEEEECGGGE
T ss_pred CCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccc---cccC-CC------------------CcccceEEechHhE
Confidence 99999999999999889999999999999999997643 2221 22 49999999999999
Q ss_pred EEcCCCCChhhhh---hhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHH
Q 022865 161 AKIDPQAPLDKVC---LLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 161 ~~iP~~~~~~~aa---~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~ 235 (291)
+++|+++++++|+ .+++++.|+|+++.+. .++++|++|||+|+|++|++++|+|+++ |+ +|++++++++|++++
T Consensus 149 ~~iP~~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~ 227 (359)
T 1h2b_A 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLA 227 (359)
T ss_dssp EECCTTCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHH
T ss_pred EECCCCCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHH
Confidence 9999999999999 6788889999987655 8899999999999999999999999999 99 899999999999999
Q ss_pred HhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChH--HHHHHHHH
Q 022865 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVS--VMRAALEC 284 (291)
Q Consensus 236 ~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~--~~~~~~~~ 284 (291)
+++|+++++++++ . +.+.+++++++ ++|+|||++|++. .+..++++
T Consensus 228 ~~lGa~~vi~~~~--~-~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~ 276 (359)
T 1h2b_A 228 ERLGADHVVDARR--D-PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG 276 (359)
T ss_dssp HHTTCSEEEETTS--C-HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE
T ss_pred HHhCCCEEEeccc--h-HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc
Confidence 9999999999876 4 77788888877 8999999999986 78777776
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-48 Score=350.39 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=229.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC--CCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
|||+++.+++++++++++|.|+|++|||||||++++||++|++.+.|.++ ...+|.++|||++|+|+++|+++++|++
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 80 (345)
T 3jv7_A 1 MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGV 80 (345)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCT
T ss_pred CeEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCC
Confidence 79999999998899999999999999999999999999999999988754 2478999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEec-ccceEEcCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQ 166 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~iP~~ 166 (291)
||+|++.+..+|+.|.+|..++.++|...... +.. ..| ....|+|+||+.++ .+.++++|+
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~---~~~-~~g-------------~~~~G~~aey~~v~~~~~~~~~p~- 142 (345)
T 3jv7_A 81 GDAVAVYGPWGCGACHACARGRENYCTRAADL---GIT-PPG-------------LGSPGSMAEYMIVDSARHLVPIGD- 142 (345)
T ss_dssp TCEEEECCSCCCSSSHHHHTTCGGGCSSHHHH---TCC-CBT-------------TTBCCSSBSEEEESCGGGEEECTT-
T ss_pred CCEEEEecCCCCCCChHHHCcCcCcCcccccc---ccc-cCC-------------cCCCceeeEEEEecchhceEeCCC-
Confidence 99999999999999999999999999432110 000 000 11234999999999 999999999
Q ss_pred CChhhhhhhcccchhhhhhhhh-hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~-~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++|+.+++++.|||+++.+ ...++++++|||+|+|++|++++|+|+++|..+|++++++++|+++++++|++++++
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa~~~i~ 222 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGADAAVK 222 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEc
Confidence 9999999999999999998866 458999999999999999999999999995559999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++ ++.+.+++++++ ++|+|||++|++..++.++++|+++
T Consensus 223 ~~~---~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~ 263 (345)
T 3jv7_A 223 SGA---GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVD 263 (345)
T ss_dssp CST---THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred CCC---cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcC
Confidence 754 677888998887 9999999999988899999999998
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-48 Score=352.94 Aligned_cols=256 Identities=25% Similarity=0.352 Sum_probs=230.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhh-hhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAY-TWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.++++ ++++++|.|+|+++||||||++++||++|++ ++.|..+ .++|.++|||++|+|+++|+++++|++|
T Consensus 1 MkA~~~~~~~~-~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vG 78 (352)
T 3fpc_A 1 MKGFAMLSIGK-VGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPG 78 (352)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEccCCC-ceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCC
Confidence 89999999987 9999999999999999999999999999999 5577654 3679999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc--ceEEcCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV--SVAKIDPQ 166 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~iP~~ 166 (291)
|+|++.+..+|+.|.+|..++.++|.........+ ....|+|+||+.++.+ .++++|++
T Consensus 79 drV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~-------------------~~~~G~~aey~~v~~~~~~~~~iP~~ 139 (352)
T 3fpc_A 79 DRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFS-------------------NVKDGVFGEFFHVNDADMNLAHLPKE 139 (352)
T ss_dssp CEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBT-------------------TTBCCSSBSCEEESSHHHHCEECCTT
T ss_pred CEEEEccccCCCCchhhcCCCcCCccccccccccc-------------------cCCCCcccceEEeccccCeEEECCCC
Confidence 99999999999999999999999887653211111 1123499999999976 99999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++|++++.++.|+|+++ +..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|+++++++
T Consensus 140 ~~~~~aa~~~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~lGa~~vi~~ 218 (352)
T 3fpc_A 140 IPLEAAVMIPDMMTTGFHGA-ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEYGATDIINY 218 (352)
T ss_dssp SCHHHHTTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHHTCCEEECG
T ss_pred CCHHHHhhccchhHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEEcC
Confidence 99999999989999999987 78899999999999999999999999999999789999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++ .++.+.+++++++ ++|+|||++|.+..+..++++|+++|
T Consensus 219 ~~--~~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G 260 (352)
T 3fpc_A 219 KN--GDIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGS 260 (352)
T ss_dssp GG--SCHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred CC--cCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCC
Confidence 76 5788889999988 89999999999888999999999983
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-48 Score=354.18 Aligned_cols=262 Identities=26% Similarity=0.322 Sum_probs=227.8
Q ss_pred CCCCCcccceeEEEEecCCCCeEEEeeecC--------CCCCCeEEEEEeeeecchhhhhhhcCCC---CCCCCCccccc
Q 022865 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVA--------PPQAGEVRIKILFTALCHTDAYTWSGKD---PEGLFPCILGH 69 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~~--------~~~~~evlVkv~~~~i~~~D~~~~~g~~---~~~~~p~~~G~ 69 (291)
|++ ..+++|||+++.+++. ++++++|.| +|+++||||||++++||++|++++.+.. ...++|.++||
T Consensus 1 m~~-~~~~~mka~~~~~~~~-l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~ 78 (363)
T 3m6i_A 1 MAS-SASKTNIGVFTNPQHD-LWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGH 78 (363)
T ss_dssp -----CCSCCEEEEECTTCC-EEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCC
T ss_pred CCC-CCcccceeEEEeCCCc-EEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCc
Confidence 444 3568999999998766 999999999 9999999999999999999999887432 12367999999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcce
Q 022865 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF 149 (291)
Q Consensus 70 e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (291)
|++|+|+++|+++++|++||+|++.+..+|+.|.+|..++.+.|++... .|....+ |+|
T Consensus 79 E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~---~g~~~~~------------------G~~ 137 (363)
T 3m6i_A 79 ESAGEVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDF---LSTPPVP------------------GLL 137 (363)
T ss_dssp EEEEEEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTSTTSC------------------CSC
T ss_pred ceEEEEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccc---cCCCCCC------------------ccc
Confidence 9999999999999999999999999999999999999999999998754 2222123 499
Q ss_pred eeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 150 SQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 150 ~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+||+.++.+.++++|+ +++++|+++. ++.|||+++ +..++++|++|||+|+|++|++++|+||++|+++|+++++++
T Consensus 138 aey~~v~~~~~~~iP~-~s~~~aa~~~-~~~ta~~~l-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~ 214 (363)
T 3m6i_A 138 RRYVNHPAVWCHKIGN-MSYENGAMLE-PLSVALAGL-QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDE 214 (363)
T ss_dssp BSEEEEEGGGEEECTT-CCHHHHHHHH-HHHHHHHHH-HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCH
T ss_pred eeEEEEehhhEEECCC-CCHHHHHhhh-HHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCH
Confidence 9999999999999999 9999999884 788999987 788999999999999999999999999999996699999999
Q ss_pred hhHHHHHhcCCCEEeCCCC---CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 230 KKFDRAKNFGVTEFVNPKD---HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 230 ~~~~~~~~~ga~~~i~~~~---~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+|+++++++ ++.++++.. +..++.+.+++++++ ++|+|||++|++..+..++++|+++|
T Consensus 215 ~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G 277 (363)
T 3m6i_A 215 GRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGG 277 (363)
T ss_dssp HHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCC
Confidence 999999999 766655431 235788889999877 99999999999888999999999983
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-48 Score=349.98 Aligned_cols=254 Identities=29% Similarity=0.417 Sum_probs=217.5
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcC-CCC--CCCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG-KDP--EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
++|||+++.+++..++++++|.|+|+++||||||++++||++|++++.| .++ ...+|.++|||++|+|+++|+++++
T Consensus 3 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 82 (348)
T 2d8a_A 3 EKMVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEG 82 (348)
T ss_dssp CEEEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CcceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCc
Confidence 4699999999885699999999999999999999999999999999988 432 2367899999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||++.+..+|+.|.+|..++.++|++... .|.. .+ |+|+||+.++.+.++++|
T Consensus 83 ~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP 140 (348)
T 2d8a_A 83 IEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKI---FGVD-TD------------------GVFAEYAVVPAQNIWKNP 140 (348)
T ss_dssp CCTTCEEEECCEECCSCCC------------CEE---TTTS-SC------------------CSSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCe---ecCC-CC------------------CcCcceEEeChHHeEECC
Confidence 9999999999999999999999999999997653 2221 22 499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV 244 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i 244 (291)
+++++++|+++. ++.|+|+++ +..++ +|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++|+++++
T Consensus 141 ~~~~~~~aa~~~-~~~ta~~~l-~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~ 217 (348)
T 2d8a_A 141 KSIPPEYATLQE-PLGNAVDTV-LAGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVI 217 (348)
T ss_dssp TTSCHHHHTTHH-HHHHHHHHH-TTSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTCSEEE
T ss_pred CCCCHHHHHhhh-HHHHHHHHH-HhcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEE
Confidence 999999999885 788999987 67888 999999999999999999999999987899999999999999999999999
Q ss_pred CCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 245 NPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 245 ~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++ .++.+.+.+++++ ++|+|||++|....++.++++++++
T Consensus 218 ~~~~--~~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~ 260 (348)
T 2d8a_A 218 NPFE--EDVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPA 260 (348)
T ss_dssp CTTT--SCHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEE
T ss_pred CCCC--cCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 8875 5677888888877 8999999999988899999999988
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-48 Score=350.74 Aligned_cols=258 Identities=23% Similarity=0.355 Sum_probs=227.2
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-C--CCCCCcccccceeEEEEEeCCCCC
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-P--EGLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
+++|||+++.+++. +++++++.|+|+++||||||++++||++|++++.+.. . ...+|.++|||++|+|+++|++++
T Consensus 5 ~~~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~ 83 (356)
T 1pl8_A 5 KPNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK 83 (356)
T ss_dssp CCCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred ccCceEEEEecCCc-EEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence 36799999999764 9999999999999999999999999999999887432 1 125789999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
+|++||||++.+..+|+.|.+|..|+.++|++... .|....+ |+|+||+.++.+.++++
T Consensus 84 ~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~------------------G~~aey~~v~~~~~~~i 142 (356)
T 1pl8_A 84 HLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDD------------------GNLCRFYKHNAAFCYKL 142 (356)
T ss_dssp SCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBC------------------CSCBSEEEEEGGGEEEC
T ss_pred CCCCCCEEEEeccCCCCCChHHHCcCcccCCCccc---cCcCCCC------------------CccccEEEeehHHEEEC
Confidence 99999999999999999999999999999997643 2221123 49999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
|+++++++|+++ .++.|+|+++ +..++++|++|||+|+|++|++++|+|+++|+.+|++++++++|+++++++|++++
T Consensus 143 P~~l~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~v 220 (356)
T 1pl8_A 143 PDNVTFEEGALI-EPLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLV 220 (356)
T ss_dssp CTTSCHHHHHHH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEE
T ss_pred cCCCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEE
Confidence 999999999876 4788999987 77889999999999999999999999999999889999999999999999999999
Q ss_pred eCCCCC-CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDH-DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~-~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++.. ..++.+.+.+.+++++|+|||++|.+..+..++++|+++
T Consensus 221 i~~~~~~~~~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 266 (356)
T 1pl8_A 221 LQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG 266 (356)
T ss_dssp EECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTT
T ss_pred EcCcccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCC
Confidence 987621 146667777777668999999999988899999999998
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-47 Score=345.64 Aligned_cols=252 Identities=27% Similarity=0.398 Sum_probs=226.3
Q ss_pred eeEEEEecCCCCeEEEeeecCC-CCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.++|. ++++|+|.|+ +++|||||||+++|||++|++.+.+..+ ..+|.++|||++|+|+++|++++.|++|
T Consensus 1 MkAvv~~~~g~-l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~G 78 (346)
T 4a2c_A 1 MKSVVNDTDGI-VRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPG 78 (346)
T ss_dssp CEEEEECSSSC-EEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTT
T ss_pred CCEEEEecCCC-EEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCC
Confidence 89999999986 9999999998 5899999999999999999999888754 3689999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|.+.+...|+.|.+|..++.++|.+... .|.. .+ |+|+||+.++.++++++|++++
T Consensus 79 drV~~~~~~~~g~c~~c~~g~~~~c~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~l~ 136 (346)
T 4a2c_A 79 DAVACVPLLPCFTCPECLKGFYSQCAKYDF---IGSR-RD------------------GGFAEYIVVKRKNVFALPTDMP 136 (346)
T ss_dssp CEEEECCEECCSCSHHHHTTCGGGCSSCEE---BTTT-BC------------------CSSBSEEEEEGGGEEECCTTSC
T ss_pred CeEEeeeccCCCCcccccCCccccCCCccc---ccCC-CC------------------cccccccccchheEEECCCCCC
Confidence 999999999999999999999999998754 2222 23 4999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
+++|+++. ++.++++ .....+++++++|||+|+|++|++++|+|+++|+..+++++++++|+++++++|+++++++++
T Consensus 137 ~~~aa~l~-~~~~~~~-~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 137 IEDGAFIE-PITVGLH-AFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGAMQTFNSSE 214 (346)
T ss_dssp GGGGGGHH-HHHHHHH-HHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEETTT
T ss_pred HHHHHhch-HHHHHHH-HHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCCeEEEeCCC
Confidence 99999875 3444444 568889999999999999999999999999999978899999999999999999999999987
Q ss_pred CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.++.+.+++++++ ++|+|||++|.+..++.++++++++|
T Consensus 215 --~~~~~~~~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G 254 (346)
T 4a2c_A 215 --MSAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHA 254 (346)
T ss_dssp --SCHHHHHHHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTC
T ss_pred --CCHHHHHHhhcccCCcccccccccccchhhhhhheecCCe
Confidence 5566777777776 89999999999999999999999983
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-47 Score=348.42 Aligned_cols=266 Identities=26% Similarity=0.403 Sum_probs=230.2
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCC---
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT--- 83 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~--- 83 (291)
..+|||+++.++++.++++++|.|+|+++||||||++++||++|+.++.|.++...+|.++|||++|+|+++| +++
T Consensus 15 ~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~ 93 (380)
T 1vj0_A 15 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDL 93 (380)
T ss_dssp CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCT
T ss_pred hhheEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-Cccccc
Confidence 3689999999998669999999999999999999999999999999999876545689999999999999999 999
Q ss_pred ---CCCCCCEEeecCCCCCCCChhhh-CCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEe-ccc
Q 022865 84 ---EVQPGDHVIPCYQAECRECKFCK-SGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVV-HDV 158 (291)
Q Consensus 84 ---~~~~Gd~V~~~~~~~~~~c~~c~-~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~ 158 (291)
+|++||+|++.+..+|+.|.+|. .++.++|++... .|.....+ . .....|+|+||+.+ +.+
T Consensus 94 ~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~---~g~~~~~~-------~----~~~~~G~~aey~~v~~~~ 159 (380)
T 1vj0_A 94 NGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGINRGCS-------E----YPHLRGCYSSHIVLDPET 159 (380)
T ss_dssp TSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTTCCSS-------S----TTCCCSSSBSEEEECTTC
T ss_pred cCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcce---eccccccC-------C----CCCCCccccceEEEcccc
Confidence 89999999999999999999999 999999997643 12100000 0 00113599999999 999
Q ss_pred ceEEcCCCCChh-hhhhhcccchhhhhhhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 159 SVAKIDPQAPLD-KVCLLGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 159 ~~~~iP~~~~~~-~aa~l~~~~~ta~~~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
.++++|++++++ +|+++. ++.|+|+++ +..+ +++|++|||+|+|++|++++|+|+++|+.+|++++++++++++++
T Consensus 160 ~~~~iP~~l~~~~~Aa~~~-~~~ta~~al-~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~ 237 (380)
T 1vj0_A 160 DVLKVSEKDDLDVLAMAMC-SGATAYHAF-DEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE 237 (380)
T ss_dssp CEEEECTTSCHHHHHHHTT-HHHHHHHHH-HTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH
T ss_pred eEEECCCCCChHHhHhhhc-HHHHHHHHH-HhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH
Confidence 999999999999 666665 999999988 5678 999999999999999999999999999549999999999999999
Q ss_pred hcCCCEEeCCCC-CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 237 NFGVTEFVNPKD-HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 237 ~~ga~~~i~~~~-~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++|++.++++.. .+.++.+.+++++++ ++|+|||++|.+..+..++++|+++|
T Consensus 238 ~lGa~~vi~~~~~~~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G 292 (380)
T 1vj0_A 238 EIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGG 292 (380)
T ss_dssp HTTCSEEEETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred HcCCcEEEeccccCcchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCC
Confidence 999999998761 025677888888887 89999999998878999999999983
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-46 Score=340.96 Aligned_cols=252 Identities=31% Similarity=0.482 Sum_probs=226.1
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|+++++|++|
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vG 80 (339)
T 1rjw_A 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG 80 (339)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCC
Confidence 799999999867999999999999999999999999999999999887642 3689999999999999999999999999
Q ss_pred CEEeecCCC-CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~~-~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|++.+.. .|+.|.+|+.++.++|++... .|.. .+ |+|+||+.++.+.++++|+++
T Consensus 81 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~~P~~~ 138 (339)
T 1rjw_A 81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYS-VD------------------GGYAEYCRAAADYVVKIPDNL 138 (339)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGCEECCTTS
T ss_pred CEEEEecCCCCCCCCchhhCcCcccCCCcce---eecC-CC------------------CcceeeEEechHHEEECCCCC
Confidence 999987653 599999999999999997643 2221 23 499999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++|+.+++++.|+|+++.+ .+++++++|||+|+|++|++++|+|+.+|+ +|++++++++++++++++|++.++++.
T Consensus 139 ~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~d~~ 216 (339)
T 1rjw_A 139 SFEEAAPIFCAGVTTYKALKV-TGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNPL 216 (339)
T ss_dssp CHHHHGGGGTHHHHHHHHHHH-HTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECTT
T ss_pred CHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHCCCCEEecCC
Confidence 999999999999999998755 489999999999998999999999999999 999999999999999999999999877
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ .++.+.+.+.+ +++|+|||++|....++.++++|+++
T Consensus 217 ~--~~~~~~~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~ 254 (339)
T 1rjw_A 217 K--EDAAKFMKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRG 254 (339)
T ss_dssp T--SCHHHHHHHHH-SSEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred C--ccHHHHHHHHh-CCCCEEEECCCCHHHHHHHHHHhhcC
Confidence 5 46677777776 68999999999988899999999988
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-47 Score=343.88 Aligned_cols=254 Identities=27% Similarity=0.439 Sum_probs=223.4
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcC-CCC--CCCCCcccccceeEEEEEeCCCCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG-KDP--EGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
+|||+++.+++. ++++++|.|+|+++||||||++++||++|++++.+ ... ...+|.++|||++|+|+++|+++++|
T Consensus 4 ~mka~~~~~~~~-l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~ 82 (352)
T 1e3j_A 4 DNLSAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHL 82 (352)
T ss_dssp CCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSC
T ss_pred cCEEEEEEcCCc-EEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCCCCCCC
Confidence 699999998764 99999999999999999999999999999998873 332 12578999999999999999999999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
++||+|++.+..+|+.|.+|..++.++|++... .|....+ |+|+||+.++.++++++|+
T Consensus 83 ~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~~~~------------------G~~aey~~v~~~~~~~iP~ 141 (352)
T 1e3j_A 83 KKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTF---CATPPDD------------------GNLARYYVHAADFCHKLPD 141 (352)
T ss_dssp CTTCEEEECCEECCSSSHHHHTTCGGGCTTCEE---TTBTTBC------------------CSCBSEEEEEGGGEEECCT
T ss_pred CCCCEEEEcCcCCCCCChhhhCcCcccCCCCcc---cCcCCCC------------------ccceeEEEeChHHeEECcC
Confidence 999999999999999999999999999997643 2221122 4999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
++++++|+++ .++.|+|+++ +..++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++.+++
T Consensus 142 ~~~~~~aa~~-~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~ 218 (352)
T 1e3j_A 142 NVSLEEGALL-EPLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLV 218 (352)
T ss_dssp TSCHHHHHTH-HHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHhCCCEEEc
Confidence 9999999876 4788999987 77889999999999999999999999999999 6999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcC---C-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTD---G-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~---g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+ ..++.+.+.+.++ + ++|+|||++|....+..++++|+++
T Consensus 219 ~~~-~~~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~ 264 (352)
T 1e3j_A 219 VDP-AKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTG 264 (352)
T ss_dssp CCT-TTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTT
T ss_pred Ccc-cccHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 763 1345566777664 4 8999999999988899999999998
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-47 Score=346.09 Aligned_cols=256 Identities=26% Similarity=0.342 Sum_probs=221.4
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|||+++.+++++++++++|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v 82 (348)
T 3two_A 3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI 82 (348)
T ss_dssp EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence 68999999999888999999999999999999999999999999999998877788999999999999999999999999
Q ss_pred CCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 88 GDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 88 Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
||+|++.+. .+|+.|.+|+.++.++|. ... .++. .+. ....+....|+|+||+.++.+.++++|++
T Consensus 83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~-~~~---~~~~-~~~--------~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 149 (348)
T 3two_A 83 GDVVGVGCFVNSCKACKPCKEHQEQFCT-KVV---FTYD-CLD--------SFHDNEPHMGGYSNNIVVDENYVISVDKN 149 (348)
T ss_dssp TCEEEECSEEECCSCSHHHHTTCGGGCT-TCE---ESSS-SEE--------GGGTTEECCCSSBSEEEEEGGGCEECCTT
T ss_pred CCEEEEeCCcCCCCCChhHhCCCcccCc-ccc---cccc-ccc--------ccccCCcCCccccceEEechhhEEECCCC
Confidence 999988664 689999999999999998 321 1111 000 00000112359999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++|+.+++++.|||+++. ..++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++.++ .
T Consensus 150 ~~~~~aa~l~~~~~ta~~~l~-~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~v~-~ 226 (348)
T 3two_A 150 APLEKVAPLLCAGITTYSPLK-FSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALSMGVKHFY-T 226 (348)
T ss_dssp SCHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHHTTCSEEE-S
T ss_pred CCHHHhhhhhhhHHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHhcCCCeec-C
Confidence 999999999999999999874 5689999999999999999999999999999 999999999999999999999988 2
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+. .. +. .++|+|||++|++..+..++++|+++|
T Consensus 227 ~~--~~----~~----~~~D~vid~~g~~~~~~~~~~~l~~~G 259 (348)
T 3two_A 227 DP--KQ----CK----EELDFIISTIPTHYDLKDYLKLLTYNG 259 (348)
T ss_dssp SG--GG----CC----SCEEEEEECCCSCCCHHHHHTTEEEEE
T ss_pred CH--HH----Hh----cCCCEEEECCCcHHHHHHHHHHHhcCC
Confidence 21 11 11 179999999999877999999999983
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-47 Score=344.95 Aligned_cols=252 Identities=27% Similarity=0.450 Sum_probs=226.4
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ...+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2dq4_A 1 MRALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQ 80 (343)
T ss_dssp CEEEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSC
T ss_pred CeEEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCC
Confidence 78999999887799999999999999999999999999999999988654 346799999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+..+|+.|.+|+.|+.++|++... .|.. .+ |+|+||+.++.+.++++|++
T Consensus 81 vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~iP~~ 138 (343)
T 2dq4_A 81 VGDHVSLESHIVCHACPACRTGNYHVCLNTQI---LGVD-RD------------------GGFAEYVVVPAENAWVNPKD 138 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEEGGGEEEECTT
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCcce---ecCC-CC------------------CcceeEEEEchHHeEECCCC
Confidence 99999999999999999999999999997653 2211 22 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+++++|+++. ++.|+|+++.+..++ +|++|||+|+|++|++++|+|+++|+.+|++++++++++++++++ +++++++
T Consensus 139 ~~~~~aa~~~-~~~ta~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~l-a~~v~~~ 215 (343)
T 2dq4_A 139 LPFEVAAILE-PFGNAVHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLVNP 215 (343)
T ss_dssp SCHHHHTTHH-HHHHHHHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTTT-CSEEECT
T ss_pred CCHHHHHhhh-HHHHHHHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-HHhccCc
Confidence 9999998874 778999988657888 999999999999999999999999987899999999999999999 9999988
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+ .++.+.++++++.++|+|||++|....++.++++|+++
T Consensus 216 ~~--~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~ 255 (343)
T 2dq4_A 216 LE--EDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPG 255 (343)
T ss_dssp TT--SCHHHHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEE
T ss_pred Cc--cCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcC
Confidence 75 56778888877448999999999988899999999988
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-47 Score=347.30 Aligned_cols=259 Identities=20% Similarity=0.260 Sum_probs=222.7
Q ss_pred ccceeEEEEecCCCCeEEEe--eecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCC-
Q 022865 7 VITCKAAVAWEPNKPLVIED--VQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT- 83 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~- 83 (291)
|.+|||+++.++++++++++ +|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|++++
T Consensus 4 p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~~ 83 (360)
T 1piw_A 4 PEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNS 83 (360)
T ss_dssp TTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred ChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCCC
Confidence 56899999999886799999 999999999999999999999999999998766557899999999999999999999
Q ss_pred CCCCCCEEeecC-CCCCCCChhhhCCCCCCCCCc-cCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 84 EVQPGDHVIPCY-QAECRECKFCKSGKTNLCGKV-RGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 84 ~~~~Gd~V~~~~-~~~~~~c~~c~~~~~~~~~~~-~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
+|++||||++.+ ..+|+.|.+|+.++.++|++. ...... . ..| ....|+|+||+.++.+.++
T Consensus 84 ~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~--~-~~g-------------~~~~G~~aey~~v~~~~~~ 147 (360)
T 1piw_A 84 GLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQP--Y-EDG-------------YVSQGGYANYVRVHEHFVV 147 (360)
T ss_dssp SCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCB--C-TTS-------------CBCCCSSBSEEEEEGGGEE
T ss_pred CCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccc--c-CCC-------------ccCCCcceeEEEEchhheE
Confidence 999999996554 468999999999999999975 111000 0 001 1123499999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
++|+++++++|+.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++
T Consensus 148 ~iP~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~lGa~ 225 (360)
T 1piw_A 148 PIPENIPSHLAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGAD 225 (360)
T ss_dssp ECCTTSCHHHHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCS
T ss_pred ECCCCCCHHHhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCC
Confidence 999999999999999999999998755 889999999999999999999999999999 899999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC--hHHHHHHHHHhhcc
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN--VSVMRAALECCHKV 288 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~--~~~~~~~~~~l~~~ 288 (291)
+++++.+. .++.+.+. +++|+|||++|. +..++.++++|+++
T Consensus 226 ~v~~~~~~-~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~ 269 (360)
T 1piw_A 226 HYIATLEE-GDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVG 269 (360)
T ss_dssp EEEEGGGT-SCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEE
T ss_pred EEEcCcCc-hHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCC
Confidence 99987652 13433332 489999999998 67788999999988
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-46 Score=337.32 Aligned_cols=251 Identities=29% Similarity=0.435 Sum_probs=218.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC--CCCCCcccccceeEEEEEeCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--EGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
.+|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ...+|.++|||++|+|+++|++ ++|
T Consensus 2 ~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~ 80 (344)
T 2h6e_A 2 VKSKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKV 80 (344)
T ss_dssp EEEEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCC
T ss_pred ceeEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCC
Confidence 3699999999987799999999999999999999999999999999998765 3468999999999999999999 999
Q ss_pred CCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEec-ccceEEcC
Q 022865 86 QPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKID 164 (291)
Q Consensus 86 ~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~iP 164 (291)
++||+|+..+..+|+.|.+|+.++.++|++... .|.. .+ |+|+||+.++ .+.++++
T Consensus 81 ~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~~i- 137 (344)
T 2h6e_A 81 KKGDNVVVYATWGDLTCRYCREGKFNICKNQII---PGQT-TN------------------GGFSEYMLVKSSRWLVKL- 137 (344)
T ss_dssp CTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBC---BTTT-BC------------------CSSBSEEEESCGGGEEEE-
T ss_pred CCCCEEEECCCCCCCCChhhhCCCcccCCCccc---cccc-cC------------------CcceeeEEecCcccEEEe-
Confidence 999999988888999999999999999997643 2221 23 4999999999 9999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhh----cCCCCCCEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhc
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNT----AKVEPGSIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~----~~~~~g~~vlI~G~g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~~~~ 238 (291)
+++++++|+.+++++.|||+++... .++ +|++|||+|+|++|++++|+|+++ |+ +|++++++++++++++++
T Consensus 138 ~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~l 215 (344)
T 2h6e_A 138 NSLSPVEAAPLADAGTTSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALEL 215 (344)
T ss_dssp SSSCHHHHGGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHHH
T ss_pred CCCCHHHhhhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHHh
Confidence 9999999999999999999987654 278 999999999999999999999999 99 899999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|+++++++++. .+.+.+++++ ++|+|||++|.+..++.++++|+++
T Consensus 216 Ga~~vi~~~~~----~~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~ 262 (344)
T 2h6e_A 216 GADYVSEMKDA----ESLINKLTDGLGASIAIDLVGTEETTYNLGKLLAQE 262 (344)
T ss_dssp TCSEEECHHHH----HHHHHHHHTTCCEEEEEESSCCHHHHHHHHHHEEEE
T ss_pred CCCEEeccccc----hHHHHHhhcCCCccEEEECCCChHHHHHHHHHhhcC
Confidence 99999876420 2234555656 8999999999987899999999998
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-46 Score=339.07 Aligned_cols=253 Identities=28% Similarity=0.431 Sum_probs=228.6
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++.+++++ +++++++.|.|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|+++++|+
T Consensus 1 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (343)
T 2eih_A 1 MRAVVMRARGGPEVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFA 80 (343)
T ss_dssp CEEEEECSSSSGGGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCC
T ss_pred CeEEEEecCCCCceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCC
Confidence 799999998864 899999999999999999999999999999999887643 36799999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+..+|+.|.+|..++.++|++... .|.. .+ |+|+||+.++.+.++++|++
T Consensus 81 vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~~~P~~ 138 (343)
T 2eih_A 81 PGDEVVINPGLSCGRCERCLAGEDNLCPRYQI---LGEH-RH------------------GTYAEYVVLPEANLAPKPKN 138 (343)
T ss_dssp TTCEEEECCEECCSCSHHHHTTCGGGCTTCEE---TTTS-SC------------------CSSBSEEEEEGGGEEECCTT
T ss_pred CCCEEEECCCCCcccchhhccCcccccccccc---cCcC-CC------------------ccceeEEEeChHHeEECCCC
Confidence 99999999999999999999999999997653 2221 23 49999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++|+.+++++.|||+++.+..+++++++|||+|+ |++|++++|+++++|+ +|++++++++++++++++|++.+++
T Consensus 139 ~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~ga~~~~d 217 (343)
T 2eih_A 139 LSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVN 217 (343)
T ss_dssp SCHHHHHHSHHHHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHhhchhhHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEc
Confidence 9999999899999999998877678999999999998 9999999999999999 9999999999999999999999888
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+ .++.+.+.+.+++ ++|+|||++| ...++.++++|+++
T Consensus 218 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~~~ 258 (343)
T 2eih_A 218 YTH--PDWPKEVRRLTGGKGADKVVDHTG-ALYFEGVIKATANG 258 (343)
T ss_dssp TTS--TTHHHHHHHHTTTTCEEEEEESSC-SSSHHHHHHHEEEE
T ss_pred CCc--ccHHHHHHHHhCCCCceEEEECCC-HHHHHHHHHhhccC
Confidence 765 4677778887766 8999999999 56799999999988
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-45 Score=337.78 Aligned_cols=255 Identities=22% Similarity=0.228 Sum_probs=222.8
Q ss_pred CcccceeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC-CCCCCcccccceeEEEEEeCCCC
Q 022865 5 GQVITCKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
+.|.+|||+++.+++ +.++++++|.|+|++|||||||++++||++|++++.|.++ ...+|.++|||++|+|+++|+++
T Consensus 23 ~m~~~mkA~~~~~~~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v 102 (363)
T 3uog_A 23 MMSKWMQEWSTETVAPHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSV 102 (363)
T ss_dssp CCCSEEEEEEBSCTTTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTC
T ss_pred cCchhhEEEEEccCCCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCC
Confidence 355779999999764 4599999999999999999999999999999999988765 34789999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCC-CceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG-AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~-~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
++|++||+|++.+.. .|..+. +.|.+...... .|. ...|+|+||+.++.+.++
T Consensus 103 ~~~~vGDrV~~~~~~------~c~~g~-~~c~~~~~~~~~~g~-------------------~~~G~~aey~~v~~~~~~ 156 (363)
T 3uog_A 103 TRFRPGDRVISTFAP------GWLDGL-RPGTGRTPAYETLGG-------------------AHPGVLSEYVVLPEGWFV 156 (363)
T ss_dssp CSCCTTCEEEECSST------TCCSSS-CCSCSSCCCCCCTTT-------------------TSCCCCBSEEEEEGGGEE
T ss_pred CCCCCCCEEEEeccc------cccccc-cccccccccccccCc-------------------CCCCcceeEEEechHHeE
Confidence 999999999987653 567777 88874322111 111 123499999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
++|+++++++|+++++++.|||+++.+..++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++
T Consensus 157 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~ 235 (363)
T 3uog_A 157 AAPKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFALGAD 235 (363)
T ss_dssp ECCTTSCHHHHHTTTTHHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTCS
T ss_pred ECCCCCCHHHHhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHHcCCC
Confidence 9999999999999999999999998888999999999999999999999999999999 999999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++... .++.+.+.+++++ ++|+||||+|. ..+..++++|+++|
T Consensus 236 ~vi~~~~--~~~~~~v~~~~~g~g~D~vid~~g~-~~~~~~~~~l~~~G 281 (363)
T 3uog_A 236 HGINRLE--EDWVERVYALTGDRGADHILEIAGG-AGLGQSLKAVAPDG 281 (363)
T ss_dssp EEEETTT--SCHHHHHHHHHTTCCEEEEEEETTS-SCHHHHHHHEEEEE
T ss_pred EEEcCCc--ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhhcCC
Confidence 9998432 5788889999887 99999999995 56999999999983
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-46 Score=336.28 Aligned_cols=258 Identities=28% Similarity=0.435 Sum_probs=228.6
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.|.+|||+++.+++.+++++++|.|+|+++||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 ~p~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~ 81 (347)
T 2hcy_A 2 IPETQKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKG 81 (347)
T ss_dssp CCSEEEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCS
T ss_pred CCcccEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCC
Confidence 4568999999999867999999999999999999999999999999999887642 368999999999999999999999
Q ss_pred CCCCCEEeecCCC-CCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 85 VQPGDHVIPCYQA-ECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 85 ~~~Gd~V~~~~~~-~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
|++||+|++.+.. .|+.|.+|+.++.++|++... .|.. .+ |+|+||+.++.+.++++
T Consensus 82 ~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~~v~~~~~~~i 139 (347)
T 2hcy_A 82 WKIGDYAGIKWLNGSCMACEYCELGNESNCPHADL---SGYT-HD------------------GSFQQYATADAVQAAHI 139 (347)
T ss_dssp CCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEE---BTTT-BC------------------CSSBSEEEEETTTSEEE
T ss_pred CcCCCEEEEecCCCCCCCChhhhCCCcccCccccc---cccC-CC------------------CcceeEEEeccccEEEC
Confidence 9999999987653 599999999999999997643 2211 23 49999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
|+++++++|+.+++++.|+|+++.+ .+++++++|||+|+ |++|++++|+++.+|+ +|++++++++++++++++|++.
T Consensus 140 P~~~~~~~aa~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~V~~~~~~~~~~~~~~~~g~~~ 217 (347)
T 2hcy_A 140 PQGTDLAQVAPILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGY-RVLGIDGGEGKEELFRSIGGEV 217 (347)
T ss_dssp CTTCCHHHHGGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSTTHHHHHHHTTCCE
T ss_pred CCCCCHHHHHHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCC-cEEEEcCCHHHHHHHHHcCCce
Confidence 9999999999999999999998744 58999999999998 9999999999999999 9999999999999999999998
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++.+ ..++.+.+.+.+.+++|++||++|....++.++++|+++
T Consensus 218 ~~d~~~-~~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~ 262 (347)
T 2hcy_A 218 FIDFTK-EKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRAN 262 (347)
T ss_dssp EEETTT-CSCHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEE
T ss_pred EEecCc-cHhHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcC
Confidence 888763 246777777777558999999999988899999999988
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-46 Score=346.05 Aligned_cols=256 Identities=24% Similarity=0.344 Sum_probs=222.3
Q ss_pred cceeEEEEecCCCCeEEEeeecCC-CCCCeEEEEEeeeecchhhhhhhcCCC-------CCCCCCcccccceeEEEEEeC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKD-------PEGLFPCILGHEAAGIVESVG 79 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~-~~~~evlVkv~~~~i~~~D~~~~~g~~-------~~~~~p~~~G~e~~G~Vv~~G 79 (291)
.+|+++++..++ .++++++|.|+ |+++||||||++++||++|++++.+.. ....+|.++|||++|+|+++|
T Consensus 29 ~~m~a~~~~~~~-~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG 107 (404)
T 3ip1_A 29 LTWLGSKVWRYP-EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAG 107 (404)
T ss_dssp BBSCGGGTEEEE-EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEEC
T ss_pred hhcceEEEEeCC-ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEEC
Confidence 444444444444 38899999999 999999999999999999999987642 123689999999999999999
Q ss_pred CCC------CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeE
Q 022865 80 EGV------TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYT 153 (291)
Q Consensus 80 ~~~------~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~ 153 (291)
+++ ++|++||+|++.+..+|+.|.+|..|+.++|++... .|.. .+ |+|+||+
T Consensus 108 ~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~g~~-~~------------------G~~aey~ 165 (404)
T 3ip1_A 108 PEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNE---LGFN-VD------------------GAFAEYV 165 (404)
T ss_dssp TTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEE---BTTT-BC------------------CSSBSEE
T ss_pred CCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccc---cCCC-CC------------------CCCcceE
Confidence 999 889999999999999999999999999999998654 2222 23 4999999
Q ss_pred EecccceEEcCCCCC------hhhhhhhcccchhhhhhhhhh-cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 022865 154 VVHDVSVAKIDPQAP------LDKVCLLGCGVPTGLGAVWNT-AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 154 ~~~~~~~~~iP~~~~------~~~aa~l~~~~~ta~~~~~~~-~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
.++.+.++++|++++ +.++++++.++.|||+++... .++++|++|||+|+|++|++++|+|+++|+.+|++++
T Consensus 166 ~v~~~~~~~iP~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~ 245 (404)
T 3ip1_A 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSE 245 (404)
T ss_dssp EEEGGGEEECGGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred EechHHeEeccccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEC
Confidence 999999999999876 345788888999999988655 4899999999999999999999999999998999999
Q ss_pred CChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCCh-HHHHHHHHHh----hcc
Q 022865 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV-SVMRAALECC----HKV 288 (291)
Q Consensus 227 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~-~~~~~~~~~l----~~~ 288 (291)
++++|+++++++|+++++++++ .++.+.+++++++ ++|+||||+|.+ ..+..++++| +++
T Consensus 246 ~~~~~~~~~~~lGa~~vi~~~~--~~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~ 311 (404)
T 3ip1_A 246 PSEVRRNLAKELGADHVIDPTK--ENFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGIN 311 (404)
T ss_dssp SCHHHHHHHHHHTCSEEECTTT--SCHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCC
T ss_pred CCHHHHHHHHHcCCCEEEcCCC--CCHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999876 5788899999988 999999999998 4677888888 888
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-46 Score=335.82 Aligned_cols=254 Identities=25% Similarity=0.400 Sum_probs=228.2
Q ss_pred eeEEEEecCC-CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPN-KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~-~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++...+ ..++++|.|.|+|++|||||||+++|||++|++++.|.++. ++|.++|||++|+|+++|+++++|++|
T Consensus 1 MKA~v~~~~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~~-~~p~i~GhE~aG~V~~vG~~V~~~~~G 79 (348)
T 4eez_A 1 MKAAVVRHNPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVKEIGADVSSLQVG 79 (348)
T ss_dssp CEEEEECSSCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTCC-CTTCBCCSEEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEEcCCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCCC-CCCcccceeEEEEEEEECceeeecccC
Confidence 8999987543 45999999999999999999999999999999999987754 689999999999999999999999999
Q ss_pred CEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|++.+. ..|+.|.+|..+..+.|...... +.. .+ |+|+||+.++.+.++++|+++
T Consensus 80 drV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~------------------G~~ae~~~~~~~~~~~iP~~~ 137 (348)
T 4eez_A 80 DRVSVAWFFEGCGHCEYCVSGNETFCREVKNA---GYS-VD------------------GGMAEEAIVVADYAVKVPDGL 137 (348)
T ss_dssp CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB---TTT-BC------------------CSSBSEEEEEGGGSCBCCTTS
T ss_pred CeEeecccccccCccccccCCccccccccccc---ccc-cC------------------CcceeeccccccceeecCCCC
Confidence 99988776 45789999999999999876542 111 23 499999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++|+++++++.|+|+++ +...+++|++|||+|+|++|.+++|+++.++..+|++++++++|+++++++|++++++++
T Consensus 138 ~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~~i~~~ 216 (348)
T 4eez_A 138 DPIEASSITCAGVTTYKAI-KVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADVTINSG 216 (348)
T ss_dssp CHHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSEEEEC-
T ss_pred CHHHHhhcccceeeEEeee-cccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeEEEeCC
Confidence 9999999999999999976 677899999999999999999999999988656999999999999999999999999998
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+ .++.+.+.+++++ ++|.+++++++..++..++++++++|
T Consensus 217 ~--~~~~~~v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G 257 (348)
T 4eez_A 217 D--VNPVDEIKKITGGLGVQSAIVCAVARIAFEQAVASLKPMG 257 (348)
T ss_dssp C--CCHHHHHHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEE
T ss_pred C--CCHHHHhhhhcCCCCceEEEEeccCcchhheeheeecCCc
Confidence 7 6788899999988 99999999999999999999999983
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-46 Score=340.92 Aligned_cols=251 Identities=18% Similarity=0.235 Sum_probs=219.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCC---CcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF---PCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~---p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++...+ |.++|||++| |+++|++ ++|+
T Consensus 1 MkA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~ 78 (357)
T 2b5w_A 1 MKAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELE 78 (357)
T ss_dssp CEEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCC
T ss_pred CeEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCC
Confidence 799999998877999999999999999999999999999999999987654456 8999999999 9999999 9999
Q ss_pred CCCEEeecCCCC--CCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 87 PGDHVIPCYQAE--CRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 87 ~Gd~V~~~~~~~--~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+||||++.+..+ |+.|.+|..++.++|++..... .|....+ |+|+||+.++.+.++++|
T Consensus 79 vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~~------------------G~~aey~~v~~~~~~~iP 139 (357)
T 2b5w_A 79 EGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFE-RGIVGAH------------------GYMSEFFTSPEKYLVRIP 139 (357)
T ss_dssp TTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEE-ETTBEEC------------------CSCBSEEEEEGGGEEECC
T ss_pred CCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccc-cCccCCC------------------cceeeEEEEchHHeEECC
Confidence 999999988877 9999999999999999764310 0211123 499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCC------CEEEEEcCChHHHHH-HHHH-HHcCCCeEEEEcCChh---hHH
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG------SIVAVFGLGTVGLAV-AEGA-KAAGASRVIGIDIDPK---KFD 233 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g------~~vlI~G~g~vG~~a-i~~a-~~~g~~~v~~~~~~~~---~~~ 233 (291)
++++ +.| +++.++.|||+++ +..++++| ++|||+|+|++|+++ +|+| +++|+++|++++++++ |++
T Consensus 140 ~~~~-~~a-al~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~ 216 (357)
T 2b5w_A 140 RSQA-ELG-FLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTID 216 (357)
T ss_dssp GGGS-TTG-GGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHH
T ss_pred CCcc-hhh-hhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHH
Confidence 9999 654 5667999999987 67889999 999999999999999 9999 9999955999999999 999
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++++|++++ ++++ .++.+ ++++ ++++|+|||++|.+..+..++++++++|
T Consensus 217 ~~~~lGa~~v-~~~~--~~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G 267 (357)
T 2b5w_A 217 IIEELDATYV-DSRQ--TPVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNG 267 (357)
T ss_dssp HHHHTTCEEE-ETTT--SCGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEE
T ss_pred HHHHcCCccc-CCCc--cCHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCC
Confidence 9999999988 7765 45555 6666 5589999999999878999999999983
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-46 Score=339.75 Aligned_cols=261 Identities=25% Similarity=0.403 Sum_probs=221.9
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
..++|+++++.++++.++++++|.|+|+++||||||++++||++|++++.|.++...+|.++|||++|+|+++|+++++|
T Consensus 19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~ 98 (369)
T 1uuf_A 19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY 98 (369)
T ss_dssp ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence 44889999998887889999999999999999999999999999999998876555689999999999999999999999
Q ss_pred CCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 86 QPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 86 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
++||+|++.+. ..|+.|.+|+.++.++|++..... .+.....| ....|+|+||+.++.+.++++|
T Consensus 99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~g-------------~~~~G~~aeyv~v~~~~~~~~P 164 (369)
T 1uuf_A 99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTY-NSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIR 164 (369)
T ss_dssp CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECC
T ss_pred CCCCEEEEccCCCCCCCCcccCCCCcccCcchhccc-ccccccCC-------------CCCCCcccceEEEcchhEEECC
Confidence 99999998876 469999999999999999762100 00000000 1123599999999999999999
Q ss_pred CC-CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 165 PQ-APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 165 ~~-~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
++ +++++|+.+++++.|||+++.+ .++++|++|||+|+|++|++++|+|+++|+ +|++++++++++++++++|++.+
T Consensus 165 ~~~ls~~~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~lGa~~v 242 (369)
T 1uuf_A 165 HPQEQLAAVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEV 242 (369)
T ss_dssp SCGGGHHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEE
T ss_pred CCCCCHHHhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCcEE
Confidence 99 9999999999999999998755 689999999999999999999999999999 79999999999999999999999
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++.+ .++ +.+.. +++|+|||++|.+..++.++++|+++
T Consensus 243 i~~~~--~~~---~~~~~-~g~Dvvid~~g~~~~~~~~~~~l~~~ 281 (369)
T 1uuf_A 243 VNSRN--ADE---MAAHL-KSFDFILNTVAAPHNLDDFTTLLKRD 281 (369)
T ss_dssp EETTC--HHH---HHTTT-TCEEEEEECCSSCCCHHHHHTTEEEE
T ss_pred ecccc--HHH---HHHhh-cCCCEEEECCCCHHHHHHHHHHhccC
Confidence 98765 333 33333 58999999999877799999999988
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=336.19 Aligned_cols=262 Identities=24% Similarity=0.295 Sum_probs=224.0
Q ss_pred CCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCC
Q 022865 4 EGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 4 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
+..+++|+++++.++++.++++++|.|+|++|||||||++++||++|++++.|.++...+|.++|||++|+|+++|++++
T Consensus 4 m~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~ 83 (357)
T 2cf5_A 4 MEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVS 83 (357)
T ss_dssp --CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECSSCC
T ss_pred ccCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECCCCC
Confidence 34578999999998877899999999999999999999999999999999988765556899999999999999999999
Q ss_pred CCCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 84 EVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 84 ~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
+|++||+|++.+. .+|+.|.+|..++.++|++.... ++.....| ....|+|+||+.++.+.+++
T Consensus 84 ~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~--~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~ 148 (357)
T 2cf5_A 84 KFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS--YNDVYING-------------QPTQGGFAKATVVHQKFVVK 148 (357)
T ss_dssp SCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEET--TTSBCTTS-------------CBCCCSSBSCEEEEGGGEEE
T ss_pred CCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCcccc--ccccccCC-------------CCCCCccccEEEechhhEEE
Confidence 9999999987654 57999999999999999754321 10000001 11245999999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV 240 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~-~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga 240 (291)
+|+++++++|+.+++++.|+|+++. ..+++ +|++|||+|+|++|++++|+|+++|+ +|++++++++++++++ ++|+
T Consensus 149 ~P~~ls~~~aa~l~~~~~ta~~~l~-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~~~lGa 226 (357)
T 2cf5_A 149 IPEGMAVEQAAPLLCAGVTVYSPLS-HFGLKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEALQDLGA 226 (357)
T ss_dssp CCSSCCHHHHTGGGTHHHHHHHHHH-HTSTTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHHTTSCC
T ss_pred CcCCCCHHHhhhhhhhHHHHHHHHH-hcCCCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHHHHcCC
Confidence 9999999999999999999999864 56788 99999999999999999999999999 8999999999999988 9999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++++++ . +.+.+.++ ++|+|||++|.+..++.++++++++
T Consensus 227 ~~vi~~~~--~---~~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~ 268 (357)
T 2cf5_A 227 DDYVIGSD--Q---AKMSELAD-SLDYVIDTVPVHHALEPYLSLLKLD 268 (357)
T ss_dssp SCEEETTC--H---HHHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEE
T ss_pred ceeecccc--H---HHHHHhcC-CCCEEEECCCChHHHHHHHHHhccC
Confidence 99998764 2 34555553 7999999999876789999999988
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.9e-46 Score=342.44 Aligned_cols=258 Identities=22% Similarity=0.332 Sum_probs=224.1
Q ss_pred ceeEEEEecCCCCeEEEeeecCCC-CC-----CeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPP-QA-----GEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~-~~-----~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
+|||+++.+++. ++++++|.|+| ++ +||||||++++||++|++++.|.++ ..+|.++|||++|+|+++|+.+
T Consensus 2 ~MkA~~~~~~~~-l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v 79 (398)
T 2dph_A 2 GNKSVVYHGTRD-LRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDV 79 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred ccEEEEEEcCCC-EEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCC
Confidence 599999998864 99999999997 68 9999999999999999999988643 3679999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCC-----CCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGA-----TGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~-----~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
++|++||+|++.+..+|+.|.+|+.++.++|.+.... ..+|.. . ....|+|+||+.++.
T Consensus 80 ~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~-~---------------~~~~G~~aey~~v~~ 143 (398)
T 2dph_A 80 ELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFD-L---------------KGWSGGQAEYVLVPY 143 (398)
T ss_dssp CSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTT-B---------------SSCCCSSBSEEEESS
T ss_pred CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccc-c---------------CCCCceeeeeEEecc
Confidence 9999999999999999999999999999999872110 001110 0 012359999999998
Q ss_pred c--ceEEcCCCCChhh----hhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 158 V--SVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 158 ~--~~~~iP~~~~~~~----aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
+ .++++|+++++++ ++++++++.|+|+++ +..++++|++|||+|+|++|++++|+|+++|+.+|+++++++++
T Consensus 144 ~~~~~~~iP~~~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~ 222 (398)
T 2dph_A 144 ADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPER 222 (398)
T ss_dssp HHHHCEECSSHHHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHH
T ss_pred ccCeEEECCCCCChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHH
Confidence 7 8999999999988 888888999999988 77899999999999999999999999999998889999999999
Q ss_pred HHHHHhcCCCEEeCCCCCCchH-HHHHHhhcCC-CccEEEEcCCChH--------------HHHHHHHHhhcc
Q 022865 232 FDRAKNFGVTEFVNPKDHDKPI-QQVLVDLTDG-GVDYSFECIGNVS--------------VMRAALECCHKV 288 (291)
Q Consensus 232 ~~~~~~~ga~~~i~~~~~~~~~-~~~v~~~~~g-g~d~v~d~~g~~~--------------~~~~~~~~l~~~ 288 (291)
+++++++|++ ++++.+ .++ .+.+++++++ ++|+|||++|... .+..++++|+++
T Consensus 223 ~~~a~~lGa~-~i~~~~--~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 292 (398)
T 2dph_A 223 LKLLSDAGFE-TIDLRN--SAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAG 292 (398)
T ss_dssp HHHHHTTTCE-EEETTS--SSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEE
T ss_pred HHHHHHcCCc-EEcCCC--cchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcC
Confidence 9999999995 888765 344 7778888877 8999999999752 699999999998
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-45 Score=340.80 Aligned_cols=261 Identities=26% Similarity=0.379 Sum_probs=224.5
Q ss_pred ceeEEEEecCCCCeEEEeeecCCCC-CCe------EEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 9 TCKAAVAWEPNKPLVIEDVQVAPPQ-AGE------VRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 9 ~~~a~~~~~~~~~~~~~~~~~~~~~-~~e------vlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
+|||+++.+++. ++++++|.|+|. ++| |||||++++||++|++++.|.++ ..+|.++|||++|+|+++|++
T Consensus 2 ~Mka~~~~~~~~-l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~ 79 (398)
T 1kol_A 2 GNRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRD 79 (398)
T ss_dssp CEEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTT
T ss_pred ccEEEEEecCCc-eEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCC
Confidence 589999998864 999999999997 898 99999999999999999988653 357899999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCC---CCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGAT---GAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~---~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
+++|++||+|++.+..+|+.|.+|++++.++|++..... .+|+... ....|+|+||+.++.+
T Consensus 80 v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~---------------~~~~G~~aey~~v~~~ 144 (398)
T 1kol_A 80 VENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDM---------------GDWTGGQAEYVLVPYA 144 (398)
T ss_dssp CCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTS---------------CCBCCCSBSEEEESSH
T ss_pred CCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccC---------------CCCCceeeeEEEecch
Confidence 999999999999888899999999999999999764210 0111000 0123599999999986
Q ss_pred --ceEEcCCCCChhh----hhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 159 --SVAKIDPQAPLDK----VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 159 --~~~~iP~~~~~~~----aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
+++++|+++++++ ++++++++.|||+++. ..++++|++|||+|+|++|++++|+||++|+.+|++++++++|+
T Consensus 145 ~~~~~~~P~~~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~ 223 (398)
T 1kol_A 145 DFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARL 223 (398)
T ss_dssp HHHCEECSCHHHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred hCeEEECCCCcchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence 8999999999887 6788889999999884 78899999999999999999999999999997899999999999
Q ss_pred HHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCCh---------------HHHHHHHHHhhccC
Q 022865 233 DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNV---------------SVMRAALECCHKVS 289 (291)
Q Consensus 233 ~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~---------------~~~~~~~~~l~~~g 289 (291)
++++++|++ ++++.+. ..+.+.+++++++ ++|+|||++|.+ ..+..++++|+++|
T Consensus 224 ~~a~~lGa~-~i~~~~~-~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 294 (398)
T 1kol_A 224 AHAKAQGFE-IADLSLD-TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAG 294 (398)
T ss_dssp HHHHHTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEE
T ss_pred HHHHHcCCc-EEccCCc-chHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCC
Confidence 999999996 7777642 3377788888877 899999999986 36899999999983
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-45 Score=334.42 Aligned_cols=252 Identities=27% Similarity=0.407 Sum_probs=226.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC--------CCCCCcccccceeEEEEEeCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------EGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
|||+++.+++++++++++|.|+|+++||||||++++||++|++++.|.++ ...+|.++|||++|+|+++|++
T Consensus 1 Mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~ 80 (347)
T 1jvb_A 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (347)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCC
Confidence 79999999987799999999999999999999999999999999888654 3368999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc-cce
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD-VSV 160 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~ 160 (291)
+++|++||+|+..+..+|+.|.+|+.++.++|++... .|.. .+ |+|+||+.++. +.+
T Consensus 81 v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~---~G~~-~~------------------G~~aey~~v~~~~~~ 138 (347)
T 1jvb_A 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGIN-FD------------------GAYAEYVIVPHYKYM 138 (347)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTT-BC------------------CSSBSEEEESCGGGE
T ss_pred CCCCCCCCEEEeCCCCCCCCChhhhCcCcccCccccc---cccc-CC------------------CcceeEEEecCccce
Confidence 9999999999988888999999999999999997643 2221 22 49999999999 999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ 238 (291)
+++ +++++++|+.+++++.|+|+++ ...+++++++|||+|+ |++|++++|+++.+ |+ +|++++++++++++++++
T Consensus 139 ~~i-~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~~ 215 (347)
T 1jvb_A 139 YKL-RRLNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKRA 215 (347)
T ss_dssp EEC-SSSCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHH
T ss_pred EEe-CCCCHHHcccchhhHHHHHHHH-HhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHHh
Confidence 999 9999999999999999999987 4588999999999998 59999999999999 99 899999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcC-CCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|++.++++.+ .++.+.+.+++. +++|++||++|.+..++.++++|+++
T Consensus 216 g~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~ 264 (347)
T 1jvb_A 216 GADYVINASM--QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQ 264 (347)
T ss_dssp TCSEEEETTT--SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEE
T ss_pred CCCEEecCCC--ccHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcC
Confidence 9999988765 456677777776 58999999999987899999999988
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-44 Score=327.62 Aligned_cols=260 Identities=23% Similarity=0.350 Sum_probs=220.1
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV 85 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~ 85 (291)
.+|+++++...+.++.++++++|.|+|++|||||||.+++||++|++++.|.++...+|.++|||++|+|+++|+++++|
T Consensus 13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~ 92 (366)
T 1yqd_A 13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV 92 (366)
T ss_dssp SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence 35667777776666679999999999999999999999999999999998876555689999999999999999999999
Q ss_pred CCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 86 QPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 86 ~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
++||+|++.+. ..|+.|.+|+.++.++|++.... ++.....| ....|+|+||+.++.+.++++|
T Consensus 93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~--~~~~~~~g-------------~~~~G~~aey~~v~~~~~~~~P 157 (366)
T 1yqd_A 93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILT--YASIYHDG-------------TITYGGYSNHMVANERYIIRFP 157 (366)
T ss_dssp CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEES--SSSBCTTS-------------CBCCCSSBSEEEEEGGGCEECC
T ss_pred CCCCEEEEcCCcCCCCCChhhhCcCcccCCccccc--ccccccCC-------------CcCCCccccEEEEchhhEEECC
Confidence 99999987654 57999999999999999654321 10000001 1123599999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCC-CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVE-PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE 242 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~-~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~ 242 (291)
+++++++|+.+++++.|+|+++. ...++ +|++|||+|+|++|++++|+|+++|+ +|++++++++++++++ ++|++.
T Consensus 158 ~~ls~~~aa~l~~~~~ta~~al~-~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~lGa~~ 235 (366)
T 1yqd_A 158 DNMPLDGGAPLLCAGITVYSPLK-YFGLDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEALKNFGADS 235 (366)
T ss_dssp TTSCTTTTGGGGTHHHHHHHHHH-HTTCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHHHTSCCSE
T ss_pred CCCCHHHhhhhhhhHHHHHHHHH-hcCcCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCce
Confidence 99999999999999999999874 45777 99999999999999999999999999 8999999999999887 999999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++.+ . +.+.+.++ ++|+|||++|....++.++++|+++
T Consensus 236 v~~~~~--~---~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~ 275 (366)
T 1yqd_A 236 FLVSRD--Q---EQMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSH 275 (366)
T ss_dssp EEETTC--H---HHHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEE
T ss_pred EEeccC--H---HHHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcC
Confidence 998764 2 34555553 7999999999876789999999988
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-44 Score=337.70 Aligned_cols=262 Identities=19% Similarity=0.231 Sum_probs=224.5
Q ss_pred CCcccceeEEEEecC---------------CCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC----------
Q 022865 4 EGQVITCKAAVAWEP---------------NKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD---------- 58 (291)
Q Consensus 4 ~~~~~~~~a~~~~~~---------------~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~---------- 58 (291)
...|.+|||+++.++ +++++++++|.|+|+++||||||++++||++|++...+..
T Consensus 25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~~~ 104 (456)
T 3krt_A 25 LPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERY 104 (456)
T ss_dssp SCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHHHH
T ss_pred CCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhhhc
Confidence 356889999999986 2459999999999999999999999999999987643221
Q ss_pred -------CCCCCC-cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCc
Q 022865 59 -------PEGLFP-CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130 (291)
Q Consensus 59 -------~~~~~p-~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~ 130 (291)
....+| .++|||++|+|+++|+++++|++||+|++.+. .|..|..|..+..+.|++... +|+...+
T Consensus 105 g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~-~c~~~~~~~~~~~~~c~~~~~---~G~~~~~-- 178 (456)
T 3krt_A 105 GRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL-SVELESSDGHNDTMLDPEQRI---WGFETNF-- 178 (456)
T ss_dssp HTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE-ECCCCSGGGTTSGGGCTTCEE---TTTTSSS--
T ss_pred cccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC-cccccccccccccccCccccc---cccCCCC--
Confidence 012467 69999999999999999999999999998643 678888998999999987654 3333222
Q ss_pred cccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhh--cCCCCCCEEEEEcC-ChHH
Q 022865 131 SRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT--AKVEPGSIVAVFGL-GTVG 207 (291)
Q Consensus 131 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~--~~~~~g~~vlI~G~-g~vG 207 (291)
|+|+||+.++.++++++|+++++++|+++++++.|||+++... .++++|++|||+|+ |++|
T Consensus 179 ----------------G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG 242 (456)
T 3krt_A 179 ----------------GGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLG 242 (456)
T ss_dssp ----------------CSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHH
T ss_pred ----------------CcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHH
Confidence 4999999999999999999999999999988999999987654 78999999999998 9999
Q ss_pred HHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCc---------------hHHHHHHhhcCC-CccEEEEc
Q 022865 208 LAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK---------------PIQQVLVDLTDG-GVDYSFEC 271 (291)
Q Consensus 208 ~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~---------------~~~~~v~~~~~g-g~d~v~d~ 271 (291)
++++|+|+++|+ +|++++++++|+++++++|++.++++.+.+. .+.+.+.+++++ ++|+||||
T Consensus 243 ~~avqlak~~Ga-~vi~~~~~~~~~~~~~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~ 321 (456)
T 3krt_A 243 SYATQFALAGGA-NPICVVSSPQKAEICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEH 321 (456)
T ss_dssp HHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEEC
T ss_pred HHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEc
Confidence 999999999999 8888889999999999999999998876321 345778888887 99999999
Q ss_pred CCChHHHHHHHHHhhccC
Q 022865 272 IGNVSVMRAALECCHKVS 289 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~g 289 (291)
+|. ..+..++++++++|
T Consensus 322 ~G~-~~~~~~~~~l~~~G 338 (456)
T 3krt_A 322 PGR-ETFGASVFVTRKGG 338 (456)
T ss_dssp SCH-HHHHHHHHHEEEEE
T ss_pred CCc-hhHHHHHHHhhCCc
Confidence 998 67999999999983
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=332.79 Aligned_cols=263 Identities=19% Similarity=0.245 Sum_probs=220.8
Q ss_pred CCCcccceeEEEEecCC-------------CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhc--------------
Q 022865 3 TEGQVITCKAAVAWEPN-------------KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWS-------------- 55 (291)
Q Consensus 3 ~~~~~~~~~a~~~~~~~-------------~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~-------------- 55 (291)
+...|.+|||+++..++ +.++++++|.|+|+++||||||++++||++|++...
T Consensus 18 ~~~~p~tmkA~v~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~ 97 (447)
T 4a0s_A 18 AAPVPDTYLALHLRAEDADMFKGVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNA 97 (447)
T ss_dssp HSCCCSEEEEEEEEGGGTTTTTTCSSCCHHHHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHH
T ss_pred ccCCChhheeeeeeccccccccccccCCCCCCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhc
Confidence 34578899999999987 359999999999999999999999999999985432
Q ss_pred --CCCCC-CCCC-cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCcc
Q 022865 56 --GKDPE-GLFP-CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKS 131 (291)
Q Consensus 56 --g~~~~-~~~p-~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~ 131 (291)
+.+.. ..+| .++|||++|+|+++|+++++|++||+|++.+..+|+.|. |..+..+.|.+... .|+...+
T Consensus 98 ~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~-~~~~~~~~c~~~~~---~G~~~~~--- 170 (447)
T 4a0s_A 98 RQGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIVHPAHVDEQEP-ATHGDGMLGTEQRA---WGFETNF--- 170 (447)
T ss_dssp TTCGGGGGGCCSEEECCSCEEEEEEEECTTCCSCCTTCEEEECSEECCTTSG-GGGTCTTCSTTCEE---TTTTSSS---
T ss_pred ccCccccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEecCcCcCccc-cccccccccccccc---ccccCCC---
Confidence 11111 2466 699999999999999999999999999998887776665 55677889987654 3332122
Q ss_pred ccccCCCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhh--hcCCCCCCEEEEEcC-ChHHH
Q 022865 132 RFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN--TAKVEPGSIVAVFGL-GTVGL 208 (291)
Q Consensus 132 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~--~~~~~~g~~vlI~G~-g~vG~ 208 (291)
|+|+||+.++.++++++|+++++++|+++++++.|||+++.. ..++++|++|||+|+ |++|+
T Consensus 171 ---------------G~~aey~~v~~~~~~~iP~~ls~~~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~ 235 (447)
T 4a0s_A 171 ---------------GGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGS 235 (447)
T ss_dssp ---------------CSSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHH
T ss_pred ---------------CceeeeeecCHHHcEECCCCCCHHHHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHH
Confidence 499999999999999999999999999998899999998764 388999999999998 99999
Q ss_pred HHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCC----------------chHHHHHHhhcCCCccEEEEcC
Q 022865 209 AVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD----------------KPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 209 ~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~----------------~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+++|+|+++|+ +|++++++++++++++++|++.++++.+.+ ..+.+.+.+.+++++|+|||++
T Consensus 236 ~a~qla~~~Ga-~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~ 314 (447)
T 4a0s_A 236 YAIQFVKNGGG-IPVAVVSSAQKEAAVRALGCDLVINRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHT 314 (447)
T ss_dssp HHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECS
T ss_pred HHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCEEEecccccccccccccccccchhhhHHHHHHHHHhCCCceEEEECC
Confidence 99999999999 888888999999999999999988764311 1235677777744999999999
Q ss_pred CChHHHHHHHHHhhccC
Q 022865 273 GNVSVMRAALECCHKVS 289 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~g 289 (291)
|.. .+..++++++++|
T Consensus 315 G~~-~~~~~~~~l~~~G 330 (447)
T 4a0s_A 315 GRV-TFGLSVIVARRGG 330 (447)
T ss_dssp CHH-HHHHHHHHSCTTC
T ss_pred Cch-HHHHHHHHHhcCC
Confidence 984 6999999999983
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-43 Score=318.36 Aligned_cols=235 Identities=19% Similarity=0.251 Sum_probs=208.1
Q ss_pred cccceeEEEEecC---C--CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCC
Q 022865 6 QVITCKAAVAWEP---N--KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 6 ~~~~~~a~~~~~~---~--~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~ 80 (291)
.+++|||+++.++ + +.++++++|.|.|+++||||||++++||++|+.++.|..+...+|.++|||++|+|+++|+
T Consensus 19 ~m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~ 98 (363)
T 4dvj_A 19 YFQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGP 98 (363)
T ss_dssp CCCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECT
T ss_pred hhheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCC
Confidence 5578999999866 2 3499999999999999999999999999999999998877667899999999999999999
Q ss_pred CCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 81 GVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 81 ~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
++++|++||+|+...... .+ |+|+||+.++.+.+
T Consensus 99 ~v~~~~vGdrV~~~~~~~----------------------------~~------------------G~~aey~~v~~~~~ 132 (363)
T 4dvj_A 99 DVTLFRPGDEVFYAGSII----------------------------RP------------------GTNAEFHLVDERIV 132 (363)
T ss_dssp TCCSCCTTCEEEECCCTT----------------------------SC------------------CSCBSEEEEEGGGC
T ss_pred CCCCCCCCCEEEEccCCC----------------------------CC------------------ccceEEEEeCHHHe
Confidence 999999999998542100 22 39999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCC-----CCCEEEEEc-CChHHHHHHHHHHHc-CCCeEEEEcCChhhHH
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE-----PGSIVAVFG-LGTVGLAVAEGAKAA-GASRVIGIDIDPKKFD 233 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~-----~g~~vlI~G-~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~ 233 (291)
+++|+++++++|+++++++.|||+++.+..+++ +|++|||+| +|++|++++|+||++ |+ +|++++++++|++
T Consensus 133 ~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~-~Vi~~~~~~~~~~ 211 (363)
T 4dvj_A 133 GRKPKTLDWAEAAALPLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDL-TVIATASRPETQE 211 (363)
T ss_dssp EECCTTSCHHHHHTSHHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCS-EEEEECSSHHHHH
T ss_pred eECCCCCCHHHHHhhhhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCC-EEEEEeCCHHHHH
Confidence 999999999999999999999999988888888 899999998 599999999999985 66 9999999999999
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCCC
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSGT 291 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg~ 291 (291)
+++++|++.++++.+ ++.+.+.++.++++|+||||+|++..+..++++|+++ |+
T Consensus 212 ~~~~lGad~vi~~~~---~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~-G~ 265 (363)
T 4dvj_A 212 WVKSLGAHHVIDHSK---PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQ-GR 265 (363)
T ss_dssp HHHHTTCSEEECTTS---CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTT-CE
T ss_pred HHHHcCCCEEEeCCC---CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCC-CE
Confidence 999999999999864 5777788875559999999999988899999999998 53
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=316.41 Aligned_cols=239 Identities=21% Similarity=0.221 Sum_probs=203.7
Q ss_pred CCCC--CcccceeEEEEecCCCCeEEE-eeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEE
Q 022865 1 MSTE--GQVITCKAAVAWEPNKPLVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVES 77 (291)
Q Consensus 1 m~~~--~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~ 77 (291)
|++. ..|.+|||+++.+++. ++++ ++|.|+|+++||||||++++||++|++++.+. ..+|.++|||++|+|++
T Consensus 1 ~~~~tm~~p~~mkA~v~~~~~~-l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~ 76 (371)
T 3gqv_A 1 MGDQPFIPPPQQTALTVNDHDE-VTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVA 76 (371)
T ss_dssp ---CCCCCCSCEEEEEECTTSC-EEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEE
T ss_pred CCCCCCCCchhceeEEEcCCCc-eEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEE
Confidence 4553 3567899999999976 9998 99999999999999999999999999988663 24689999999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 78 ~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
+|+++++|++||+|+.. |..|..+. ..+ |+|+||+.++.
T Consensus 77 vG~~v~~~~~GdrV~~~-------~~~~~~~~----------------~~~------------------G~~aey~~v~~ 115 (371)
T 3gqv_A 77 VGSDVTHIQVGDRVYGA-------QNEMCPRT----------------PDQ------------------GAFSQYTVTRG 115 (371)
T ss_dssp ECTTCCSCCTTCEEEEE-------CCTTCTTC----------------TTC------------------CSSBSEEECCT
T ss_pred eCCCCCCCCCCCEEEEe-------ccCCCCCC----------------CCC------------------CcCcCeEEEch
Confidence 99999999999999744 33332211 022 39999999999
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhh-cCC-----------CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNT-AKV-----------EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG 224 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~-~~~-----------~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~ 224 (291)
+.++++|+++++++|+++++++.|+|+++.+. .++ ++|++|||+|+ |++|++++|+|+++|+ +|++
T Consensus 116 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~ 194 (371)
T 3gqv_A 116 RVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY-IPIA 194 (371)
T ss_dssp TCEEECCTTCCHHHHHTSHHHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEE
T ss_pred hheEECCCCCCHHHHhhhhhhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEE
Confidence 99999999999999999999999999988776 443 89999999998 9999999999999999 8888
Q ss_pred EcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhh-cc
Q 022865 225 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH-KV 288 (291)
Q Consensus 225 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~-~~ 288 (291)
+. +++|+++++++|+++++++++ .++.+.+++++++++|+||||+|++..+..++++|+ ++
T Consensus 195 ~~-~~~~~~~~~~lGa~~vi~~~~--~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~ 256 (371)
T 3gqv_A 195 TC-SPHNFDLAKSRGAEEVFDYRA--PNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAG 256 (371)
T ss_dssp EE-CGGGHHHHHHTTCSEEEETTS--TTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTC
T ss_pred Ee-CHHHHHHHHHcCCcEEEECCC--chHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCC
Confidence 85 789999999999999999876 678889999998889999999999888999999994 66
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-43 Score=314.47 Aligned_cols=228 Identities=26% Similarity=0.348 Sum_probs=210.1
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
|||+++.+++++ +++++++.|+|++|||||||++++||++|++++.|.++..++|.++|||++|+|+++|+++++|++
T Consensus 2 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~ 81 (325)
T 3jyn_A 2 AKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFKV 81 (325)
T ss_dssp EEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred cEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence 899999998876 999999999999999999999999999999999998776678999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||+|+.... .+ |+|+||+.++.+.++++|+++
T Consensus 82 GdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~~P~~~ 113 (325)
T 3jyn_A 82 GDRVAYGTG------------------------------PL------------------GAYSEVHVLPEANLVKLADSV 113 (325)
T ss_dssp TCEEEESSS------------------------------SS------------------CCSBSEEEEEGGGEEECCTTS
T ss_pred CCEEEEecC------------------------------CC------------------ccccceEEecHHHeEECCCCC
Confidence 999974421 22 399999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++++|+.+++.+.|+|+++.+..++++|++|||+|+ |++|++++|+++++|+ +|++++++++++++++++|++.++++
T Consensus 114 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~Ga~~~~~~ 192 (325)
T 3jyn_A 114 SFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKALGAWETIDY 192 (325)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEET
T ss_pred CHHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCCEEEeC
Confidence 999999999999999999888889999999999985 9999999999999999 99999999999999999999999988
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+ .++.+.+.+.+++ ++|+||||+|. ..+..++++|+++|
T Consensus 193 ~~--~~~~~~~~~~~~~~g~Dvvid~~g~-~~~~~~~~~l~~~G 233 (325)
T 3jyn_A 193 SH--EDVAKRVLELTDGKKCPVVYDGVGQ-DTWLTSLDSVAPRG 233 (325)
T ss_dssp TT--SCHHHHHHHHTTTCCEEEEEESSCG-GGHHHHHTTEEEEE
T ss_pred CC--ccHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhcCCC
Confidence 76 6788889998887 99999999998 56999999999983
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=9e-43 Score=317.12 Aligned_cols=234 Identities=20% Similarity=0.218 Sum_probs=211.1
Q ss_pred CCCcccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeC
Q 022865 3 TEGQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVG 79 (291)
Q Consensus 3 ~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G 79 (291)
++..|.+|||+++.+++.+ ++++++|.|+|+++||||||++++||++|+..+.|.++.. .+|.++|||++|+|+++|
T Consensus 22 ~~~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG 101 (353)
T 4dup_A 22 SMSLPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVG 101 (353)
T ss_dssp -CCCCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEEC
T ss_pred cCCCChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEEC
Confidence 3456789999999998764 9999999999999999999999999999999999877543 579999999999999999
Q ss_pred CCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc
Q 022865 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (291)
Q Consensus 80 ~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 159 (291)
+++++|++||+|+... .+ |+|+||+.++.+.
T Consensus 102 ~~v~~~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~ 132 (353)
T 4dup_A 102 PGVSGYAVGDKVCGLA-------------------------------NG------------------GAYAEYCLLPAGQ 132 (353)
T ss_dssp TTCCSCCTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGGG
T ss_pred CCCCCCCCCCEEEEec-------------------------------CC------------------CceeeEEEEcHHH
Confidence 9999999999997432 12 3999999999999
Q ss_pred eEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
++++|+++++++|+.+++++.|+|+++.+..+++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++
T Consensus 133 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~l 211 (353)
T 4dup_A 133 ILPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACERL 211 (353)
T ss_dssp EEECCTTCCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHH
T ss_pred cEeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhc
Confidence 99999999999999999999999999888899999999999965 9999999999999999 899999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
|++.++++.+ .++.+.+.+.+++++|+||||+|.+ .+..++++|+++|
T Consensus 212 Ga~~~~~~~~--~~~~~~~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G 259 (353)
T 4dup_A 212 GAKRGINYRS--EDFAAVIKAETGQGVDIILDMIGAA-YFERNIASLAKDG 259 (353)
T ss_dssp TCSEEEETTT--SCHHHHHHHHHSSCEEEEEESCCGG-GHHHHHHTEEEEE
T ss_pred CCCEEEeCCc--hHHHHHHHHHhCCCceEEEECCCHH-HHHHHHHHhccCC
Confidence 9999998876 5677888888855999999999985 5899999999983
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-43 Score=314.86 Aligned_cols=233 Identities=27% Similarity=0.360 Sum_probs=209.6
Q ss_pred CCCCCcccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEe
Q 022865 1 MSTEGQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESV 78 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~ 78 (291)
|+. ..|.+|||+++.+++++ +++++++.|+|++|||||||++++||++|++++.|.++ .++|.++|||++|+|+++
T Consensus 1 M~~-~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~v 78 (334)
T 3qwb_A 1 MKC-TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAK 78 (334)
T ss_dssp -----CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEE
T ss_pred CCC-CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEE
Confidence 444 35788999999998875 89999999999999999999999999999999998765 358999999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEec-c
Q 022865 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-D 157 (291)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-~ 157 (291)
|+++++|++||+|+... .|+|++|+.++ .
T Consensus 79 G~~v~~~~~GdrV~~~~--------------------------------------------------~G~~aey~~v~~~ 108 (334)
T 3qwb_A 79 GKGVTNFEVGDQVAYIS--------------------------------------------------NSTFAQYSKISSQ 108 (334)
T ss_dssp CTTCCSCCTTCEEEEEC--------------------------------------------------SSCSBSEEEEETT
T ss_pred CCCCCCCCCCCEEEEee--------------------------------------------------CCcceEEEEecCc
Confidence 99999999999997431 23899999999 9
Q ss_pred cceEEcCCCCChhh---hhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 158 VSVAKIDPQAPLDK---VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 158 ~~~~~iP~~~~~~~---aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
+.++++|+++++++ ++.+++.+.|+|+++.+..++++|++|||+|+ |++|++++|+++++|+ +|+++++++++++
T Consensus 109 ~~~~~~P~~~~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~ 187 (334)
T 3qwb_A 109 GPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLK 187 (334)
T ss_dssp SSEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred ceEEECCCCCCHHHhhhhhhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 99999999999999 88888899999998888889999999999995 9999999999999999 9999999999999
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++++|++.++++.+ .++.+.+.+.+++ ++|+||||+|. ..++.++++|+++|
T Consensus 188 ~~~~~ga~~~~~~~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G 241 (334)
T 3qwb_A 188 IAKEYGAEYLINASK--EDILRQVLKFTNGKGVDASFDSVGK-DTFEISLAALKRKG 241 (334)
T ss_dssp HHHHTTCSEEEETTT--SCHHHHHHHHTTTSCEEEEEECCGG-GGHHHHHHHEEEEE
T ss_pred HHHHcCCcEEEeCCC--chHHHHHHHHhCCCCceEEEECCCh-HHHHHHHHHhccCC
Confidence 999999999998876 6788888888877 89999999998 56999999999983
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=314.28 Aligned_cols=229 Identities=21% Similarity=0.255 Sum_probs=205.4
Q ss_pred cceeEEEEecCC-----CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 8 ITCKAAVAWEPN-----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 8 ~~~~a~~~~~~~-----~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
|+|||+++.++| +.++++++|.|.|++|||||||++++||++|++.+.+. ...+|.++|||++|+|+++|+++
T Consensus 1 m~MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v 78 (346)
T 3fbg_A 1 MSLKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEV 78 (346)
T ss_dssp -CEEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTC
T ss_pred CCcEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCC
Confidence 579999999876 45999999999999999999999999999999998876 34689999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
++|++||+|+...... .+ |+|+||+.++.+.+++
T Consensus 79 ~~~~~GdrV~~~~~~~----------------------------~~------------------G~~aey~~v~~~~~~~ 112 (346)
T 3fbg_A 79 TMFNQGDIVYYSGSPD----------------------------QN------------------GSNAEYQLINERLVAK 112 (346)
T ss_dssp CSCCTTCEEEECCCTT----------------------------SC------------------CSSBSEEEEEGGGEEE
T ss_pred CcCCCCCEEEEcCCCC----------------------------CC------------------cceeEEEEEChHHeEE
Confidence 9999999998542100 22 3999999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCC------CCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVE------PGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~------~g~~vlI~G-~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
+|+++++++|+++++++.|||+++.+..+++ +|++|||+| +|++|++++|+|+++|+ +|+++++++++++++
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~ 191 (346)
T 3fbg_A 113 APKNISAEQAVSLPLTGITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWT 191 (346)
T ss_dssp CCSSSCHHHHTTSHHHHHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHH
T ss_pred CCCCCCHHHhhhcchhHHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHH
Confidence 9999999999999999999999988888888 999999995 59999999999999999 999999999999999
Q ss_pred HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 236 KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 236 ~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++|++.++++++ ++.+.+.+..++++|+||||+|++..+..++++|+++
T Consensus 192 ~~lGa~~vi~~~~---~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~ 241 (346)
T 3fbg_A 192 KKMGADIVLNHKE---SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPR 241 (346)
T ss_dssp HHHTCSEEECTTS---CHHHHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEE
T ss_pred HhcCCcEEEECCc---cHHHHHHHhCCCCccEEEECCCchHHHHHHHHHhccC
Confidence 9999999998864 4677777774449999999999988889999999998
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=314.49 Aligned_cols=236 Identities=26% Similarity=0.371 Sum_probs=206.3
Q ss_pred CCCCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC--CCCCcccccceeEEEEEe
Q 022865 1 MSTEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE--GLFPCILGHEAAGIVESV 78 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~--~~~p~~~G~e~~G~Vv~~ 78 (291)
||. .|.+|||+++.+++++++++++|.|+|++|||||||++++||++|++++.|..+. ..+|.++|||++|+|+++
T Consensus 1 Ms~--~~~~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~v 78 (343)
T 3gaz_A 1 MSL--TTPTMIAAVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAV 78 (343)
T ss_dssp -------CEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEE
T ss_pred CCC--CchhheEEEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEE
Confidence 554 4578999999999988999999999999999999999999999999999886532 468999999999999999
Q ss_pred CCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc
Q 022865 79 GEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 158 (291)
Q Consensus 79 G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 158 (291)
|+++++|++||+|+.... |....+ |+|+||+.++.+
T Consensus 79 G~~v~~~~vGdrV~~~~~--------------------------g~~~~~------------------G~~aey~~v~~~ 114 (343)
T 3gaz_A 79 GPEVDSFRVGDAVFGLTG--------------------------GVGGLQ------------------GTHAQFAAVDAR 114 (343)
T ss_dssp CTTCCSCCTTCEEEEECC--------------------------SSTTCC------------------CSSBSEEEEEGG
T ss_pred CCCCCCCCCCCEEEEEeC--------------------------CCCCCC------------------cceeeEEEecHH
Confidence 999999999999985421 000012 499999999999
Q ss_pred ceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 159 SVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 159 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
.++++|+++++++|+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|+++ .++++++++++
T Consensus 115 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 115 LLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp GEEECCTTSCHHHHHTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHH
T ss_pred HeeeCCCCCCHHHHHHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHH
Confidence 999999999999999999999999999888899999999999995 9999999999999999 89999 88999999999
Q ss_pred cCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 238 FGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 238 ~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+|++. ++ .. .++.+.+.+.+++ ++|+||||+|. ..+..++++|+++|
T Consensus 193 lGa~~-i~-~~--~~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~G 240 (343)
T 3gaz_A 193 LGATP-ID-AS--REPEDYAAEHTAGQGFDLVYDTLGG-PVLDASFSAVKRFG 240 (343)
T ss_dssp HTSEE-EE-TT--SCHHHHHHHHHTTSCEEEEEESSCT-HHHHHHHHHEEEEE
T ss_pred cCCCE-ec-cC--CCHHHHHHHHhcCCCceEEEECCCc-HHHHHHHHHHhcCC
Confidence 99988 66 33 5677888888877 99999999998 56999999999983
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-42 Score=315.08 Aligned_cols=228 Identities=20% Similarity=0.259 Sum_probs=208.8
Q ss_pred cceeEEEEecCCCC---eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCC
Q 022865 8 ITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 8 ~~~~a~~~~~~~~~---~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
++|||+++.+++++ ++++++|.|+|++|||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|++++
T Consensus 3 ~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v~ 82 (340)
T 3gms_A 3 LHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAFVS 82 (340)
T ss_dssp CEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTTSC
T ss_pred cccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCCCC
Confidence 58999999999987 899999999999999999999999999999999998754 47899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
+|++||+|+... .+ |+|+||+.++.+.++++
T Consensus 83 ~~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~v 113 (340)
T 3gms_A 83 RELIGKRVLPLR-------------------------------GE------------------GTWQEYVKTSADFVVPI 113 (340)
T ss_dssp GGGTTCEEEECS-------------------------------SS------------------CSSBSEEEEEGGGEEEC
T ss_pred CCCCCCEEEecC-------------------------------CC------------------ccceeEEEcCHHHeEEC
Confidence 999999997431 12 39999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
|+++++++|+++++.+.|+|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++.
T Consensus 114 P~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~lga~~ 192 (340)
T 3gms_A 114 PDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLRLGAAY 192 (340)
T ss_dssp CTTSCHHHHTTSSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSE
T ss_pred CCCCCHHHHhhhcchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhCCCcE
Confidence 9999999999999999999999888999999999999998 6999999999999999 9999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 243 FVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++.+ .++.+.+.+++++ ++|+||||+|.+. ...++++|+++
T Consensus 193 ~~~~~~--~~~~~~~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~ 236 (340)
T 3gms_A 193 VIDTST--APLYETVMELTNGIGADAAIDSIGGPD-GNELAFSLRPN 236 (340)
T ss_dssp EEETTT--SCHHHHHHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEE
T ss_pred EEeCCc--ccHHHHHHHHhCCCCCcEEEECCCChh-HHHHHHHhcCC
Confidence 998876 5788889998887 9999999999876 45667899988
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-42 Score=314.29 Aligned_cols=230 Identities=23% Similarity=0.266 Sum_probs=208.6
Q ss_pred CcccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCC
Q 022865 5 GQVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
..|.+|||+++..++++ +++++++.|+|++|||||||++++||++|+..+.|.++. ..+|.++|||++|+|+++|+.
T Consensus 17 ~~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~ 96 (342)
T 4eye_A 17 QGPGSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEG 96 (342)
T ss_dssp -CCCEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTT
T ss_pred cCCcceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCC
Confidence 46789999999987765 999999999999999999999999999999999987753 378999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
++ |++||+|+... .+ |+|+||+.++.+.++
T Consensus 97 v~-~~vGDrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~ 126 (342)
T 4eye_A 97 SG-IKPGDRVMAFN-------------------------------FI------------------GGYAERVAVAPSNIL 126 (342)
T ss_dssp SS-CCTTCEEEEEC-------------------------------SS------------------CCSBSEEEECGGGEE
T ss_pred CC-CCCCCEEEEec-------------------------------CC------------------CcceEEEEEcHHHeE
Confidence 99 99999997542 12 389999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
++|+++++++|+++++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++++++++++++++|+
T Consensus 127 ~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga 205 (342)
T 4eye_A 127 PTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKSVGA 205 (342)
T ss_dssp ECCTTSCHHHHHHHTTHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTC
T ss_pred ECCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCC
Confidence 999999999999999999999999888899999999999998 9999999999999999 99999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.++++. .++.+.+.+.+++ ++|+||||+|.+ .+..++++|+++|
T Consensus 206 ~~v~~~~---~~~~~~v~~~~~~~g~Dvvid~~g~~-~~~~~~~~l~~~G 251 (342)
T 4eye_A 206 DIVLPLE---EGWAKAVREATGGAGVDMVVDPIGGP-AFDDAVRTLASEG 251 (342)
T ss_dssp SEEEESS---TTHHHHHHHHTTTSCEEEEEESCC---CHHHHHHTEEEEE
T ss_pred cEEecCc---hhHHHHHHHHhCCCCceEEEECCchh-HHHHHHHhhcCCC
Confidence 9998876 4678888888887 999999999985 5899999999983
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=322.47 Aligned_cols=248 Identities=19% Similarity=0.249 Sum_probs=210.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCC-CeEEEEEeeeecchhhhhhhcC--CCCCCCC---CcccccceeEEEEEeCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQA-GEVRIKILFTALCHTDAYTWSG--KDPEGLF---PCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~-~evlVkv~~~~i~~~D~~~~~g--~~~~~~~---p~~~G~e~~G~Vv~~G~~~~ 83 (291)
|||+++.+++++++++++|.|.|++ +||||||++++||++|++++.| .++...+ |.++|||++|+|++ ++ +
T Consensus 1 MkA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~ 77 (366)
T 2cdc_A 1 MKAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-H 77 (366)
T ss_dssp CEEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-S
T ss_pred CeEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-C
Confidence 7999999988779999999999999 9999999999999999999988 5543356 89999999999999 66 8
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
+|++||+|++.+..+|+.|.+|+.++.++|++..... .|.... .|+|+||+.++.+.++++
T Consensus 78 ~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~g~~~~------------------~G~~aey~~v~~~~~~~i 138 (366)
T 2cdc_A 78 GFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGE-AGIHKM------------------DGFMREWWYDDPKYLVKI 138 (366)
T ss_dssp SCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEE-ETTBEE------------------CCSCBSEEEECGGGEEEE
T ss_pred CCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCccc-CCccCC------------------CCceeEEEEechHHeEEC
Confidence 8999999999999999999999999999999764310 011101 249999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhh--h--hcCCC--C-------CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVW--N--TAKVE--P-------GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP- 229 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~--~--~~~~~--~-------g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~- 229 (291)
|++++ ++|+ ++.++.|+|+++. . ..+++ + +++|||+|+|++|++++|+|+++|+ +|+++++++
T Consensus 139 P~~l~-~~Aa-l~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~ 215 (366)
T 2cdc_A 139 PKSIE-DIGI-LAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREP 215 (366)
T ss_dssp CGGGT-TTGG-GHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCC
T ss_pred cCCcc-hhhh-hcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCcc
Confidence 99999 7765 5678999999886 4 67888 8 9999999999999999999999999 999999998
Q ss_pred --hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHH-HHHHHHhhcc
Q 022865 230 --KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVM-RAALECCHKV 288 (291)
Q Consensus 230 --~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~-~~~~~~l~~~ 288 (291)
+++++++++|++.+ + .+ ++.+.+.+ +++++|+|||++|.+..+ +.++++|+++
T Consensus 216 ~~~~~~~~~~~ga~~v-~-~~---~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~ 271 (366)
T 2cdc_A 216 TEVEQTVIEETKTNYY-N-SS---NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRN 271 (366)
T ss_dssp CHHHHHHHHHHTCEEE-E-CT---TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEE
T ss_pred chHHHHHHHHhCCcee-c-hH---HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcC
Confidence 89999999999877 6 43 44455555 446899999999997778 9999999887
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-42 Score=311.32 Aligned_cols=220 Identities=14% Similarity=0.152 Sum_probs=191.2
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
.+|||+++.+..+.++++++|.|+|+++||||||++++||++|++.+.|.++...+|.++|||++|+|+++|+++++|++
T Consensus 3 ~tMka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~v 82 (315)
T 3goh_A 3 EQHQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKML 82 (315)
T ss_dssp CEEEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGT
T ss_pred cceEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCC
Confidence 46999999964445999999999999999999999999999999999988776688999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
||||+..+... .+ |+|+||+.++.+.++++|+++
T Consensus 83 GdrV~~~~~~~----------------------------~~------------------G~~aey~~v~~~~~~~iP~~~ 116 (315)
T 3goh_A 83 GRRVAYHTSLK----------------------------RH------------------GSFAEFTVLNTDRVMTLPDNL 116 (315)
T ss_dssp TCEEEEECCTT----------------------------SC------------------CSSBSEEEEETTSEEECCTTS
T ss_pred CCEEEEeCCCC----------------------------CC------------------cccccEEEEcHHHhccCcCCC
Confidence 99998654210 22 399999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++++|+++++++.|||+++ +..++++|++|||+|+|++|++++|+||++|+ +|++++ +++|+++++++|++++++
T Consensus 117 ~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~lGa~~v~~-- 191 (315)
T 3goh_A 117 SFERAAALPCPLLTAWQAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKRGVRHLYR-- 191 (315)
T ss_dssp CHHHHHTSHHHHHHHHHHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHHTEEEEES--
T ss_pred CHHHHhhCccHHHHHHHHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHcCCCEEEc--
Confidence 9999999999999999998 88999999999999999999999999999999 999998 899999999999999884
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ . .++ ++++|+||||+|++. +..++++|+++
T Consensus 192 d--~------~~v-~~g~Dvv~d~~g~~~-~~~~~~~l~~~ 222 (315)
T 3goh_A 192 E--P------SQV-TQKYFAIFDAVNSQN-AAALVPSLKAN 222 (315)
T ss_dssp S--G------GGC-CSCEEEEECC--------TTGGGEEEE
T ss_pred C--H------HHh-CCCccEEEECCCchh-HHHHHHHhcCC
Confidence 1 1 122 459999999999976 58899999988
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-42 Score=315.84 Aligned_cols=237 Identities=15% Similarity=0.151 Sum_probs=203.0
Q ss_pred CCCCCcccceeEEEEe--c---CCCCeEEEee---------ecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCc
Q 022865 1 MSTEGQVITCKAAVAW--E---PNKPLVIEDV---------QVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPC 65 (291)
Q Consensus 1 m~~~~~~~~~~a~~~~--~---~~~~~~~~~~---------~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~ 65 (291)
||+...|.+|||+++. + ..+.++++++ +.|+|++|||||||++++||++|++.+.|.++. ..+|.
T Consensus 2 Ms~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~ 81 (349)
T 3pi7_A 2 MSPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR 81 (349)
T ss_dssp ---CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTS
T ss_pred CCCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCC
Confidence 7887788999999999 2 3345888888 999999999999999999999999999987653 36899
Q ss_pred ccccceeEEEEEeCCCC-CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceeccc
Q 022865 66 ILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 144 (291)
Q Consensus 66 ~~G~e~~G~Vv~~G~~~-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~ 144 (291)
++|||++|+|+++|+++ ++|++||+|+.... ..
T Consensus 82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~g----------------------------------------------~~ 115 (349)
T 3pi7_A 82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFATG----------------------------------------------LS 115 (349)
T ss_dssp BCCSEEEEEEEEECSSHHHHHHTTCEEEEECT----------------------------------------------TS
T ss_pred CccceEEEEEEEECCCccCCCCCCCEEEEecc----------------------------------------------CC
Confidence 99999999999999999 89999999985531 01
Q ss_pred CCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCC-CEEEEEc-CChHHHHHHHHHHHcCCCeE
Q 022865 145 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPG-SIVAVFG-LGTVGLAVAEGAKAAGASRV 222 (291)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g-~~vlI~G-~g~vG~~ai~~a~~~g~~~v 222 (291)
..|+|+||+.++.+.++++|+++++++|+.+++.+.|||+ +.+..+ +++ +++||+| +|++|++++|+|+++|+ +|
T Consensus 116 ~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~-~~~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga-~V 192 (349)
T 3pi7_A 116 NWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIA-MFDIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGF-RP 192 (349)
T ss_dssp SCCSSBSEEEEEGGGEEECCTTCCC--GGGSSHHHHHHHH-HHHHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTC-EE
T ss_pred CCccceeeEeechHHeEECCCCCCHHHHhhccccHHHHHH-HHHHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EE
Confidence 1249999999999999999999999999999999999996 445566 666 6888885 59999999999999999 99
Q ss_pred EEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 223 IGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 223 ~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++++++++++++++|++.++++++ .++.+.+.+++++ ++|+||||+|.+. +..++++|+++|
T Consensus 193 i~~~~~~~~~~~~~~~Ga~~~~~~~~--~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G 257 (349)
T 3pi7_A 193 IVTVRRDEQIALLKDIGAAHVLNEKA--PDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRA 257 (349)
T ss_dssp EEEESCGGGHHHHHHHTCSEEEETTS--TTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTC
T ss_pred EEEeCCHHHHHHHHHcCCCEEEECCc--HHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCC
Confidence 99999999999999999999999876 6788889988876 9999999999876 689999999983
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-42 Score=307.28 Aligned_cols=227 Identities=21% Similarity=0.259 Sum_probs=197.3
Q ss_pred ccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-----CCCCCCcccccceeEEEEEeC
Q 022865 7 VITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-----PEGLFPCILGHEAAGIVESVG 79 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-----~~~~~p~~~G~e~~G~Vv~~G 79 (291)
+++|||+++.+++++ ++++++|.|+|++|||||||++++||++|++++.|.. ....+|.++|||++|+|+++|
T Consensus 4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG 83 (321)
T 3tqh_A 4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG 83 (321)
T ss_dssp -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence 468999999998876 9999999999999999999999999999999998832 234689999999999999999
Q ss_pred CCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc
Q 022865 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (291)
Q Consensus 80 ~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 159 (291)
+++++|++||+|+.....++ .+ |+|+||+.++.+.
T Consensus 84 ~~v~~~~~GdrV~~~~~~~~---------------------------~~------------------G~~aey~~v~~~~ 118 (321)
T 3tqh_A 84 SDVNNVNIGDKVMGIAGFPD---------------------------HP------------------CCYAEYVCASPDT 118 (321)
T ss_dssp TTCCSCCTTCEEEEECSTTT---------------------------CC------------------CCSBSEEEECGGG
T ss_pred CCCCCCCCCCEEEEccCCCC---------------------------CC------------------CcceEEEEecHHH
Confidence 99999999999986643110 22 3999999999999
Q ss_pred eEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G-~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
++++|+++++++|+++++++.|+|+++ +..++++|++|||+| +|++|++++|+|+++|+ +|+++. +++++++++++
T Consensus 119 ~~~iP~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~l 195 (321)
T 3tqh_A 119 IIQKLEKLSFLQAASLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKAL 195 (321)
T ss_dssp EEECCTTSCHHHHHHSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHHH
T ss_pred hccCCCCCCHHHHhhhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHHc
Confidence 999999999999999999999999988 889999999999997 59999999999999999 898886 56679999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|+++++++++.+ .+.+.+ .++|+||||+|++.. ..++++|+++
T Consensus 196 Ga~~~i~~~~~~-~~~~~~-----~g~D~v~d~~g~~~~-~~~~~~l~~~ 238 (321)
T 3tqh_A 196 GAEQCINYHEED-FLLAIS-----TPVDAVIDLVGGDVG-IQSIDCLKET 238 (321)
T ss_dssp TCSEEEETTTSC-HHHHCC-----SCEEEEEESSCHHHH-HHHGGGEEEE
T ss_pred CCCEEEeCCCcc-hhhhhc-----cCCCEEEECCCcHHH-HHHHHhccCC
Confidence 999999987622 132222 479999999999774 9999999998
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=306.27 Aligned_cols=230 Identities=24% Similarity=0.353 Sum_probs=206.1
Q ss_pred ccceeEEEEecCCCC--eEE-EeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCC
Q 022865 7 VITCKAAVAWEPNKP--LVI-EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~--~~~-~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
+.+|||+++.+++.+ +++ +++|.|+|+++||||||.+++||++|+.++.|.++. ..+|.++|||++|+|+++|+++
T Consensus 27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v 106 (351)
T 1yb5_A 27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA 106 (351)
T ss_dssp -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence 457999999987753 888 899999999999999999999999999999887642 3689999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
++|++||+|+.... .+ |+|+||+.++.+.+++
T Consensus 107 ~~~~vGdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~ 138 (351)
T 1yb5_A 107 SAFKKGDRVFTSST------------------------------IS------------------GGYAEYALAADHTVYK 138 (351)
T ss_dssp TTCCTTCEEEESCC------------------------------SS------------------CSSBSEEEEEGGGEEE
T ss_pred CCCCCCCEEEEeCC------------------------------CC------------------CcceeEEEECHHHeEE
Confidence 99999999975421 12 3999999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+|+++++++|+++++++.|||+++.+..+++++++|||+|+ |++|++++|+++.+|+ +|++++++++++++++++|++
T Consensus 139 ~P~~l~~~~aA~l~~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~ 217 (351)
T 1yb5_A 139 LPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAH 217 (351)
T ss_dssp CCTTSCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCS
T ss_pred CCCCCCHHHHHhhhhHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHcCCC
Confidence 99999999999999999999999877889999999999998 9999999999999999 899999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++++.+ .++.+.+.+.+++ ++|++||++|.+ .+..++++++++
T Consensus 218 ~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~G~~-~~~~~~~~l~~~ 262 (351)
T 1yb5_A 218 EVFNHRE--VNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHG 262 (351)
T ss_dssp EEEETTS--TTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEE
T ss_pred EEEeCCC--chHHHHHHHHcCCCCcEEEEECCChH-HHHHHHHhccCC
Confidence 9988765 5677778887766 899999999985 588999999998
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-41 Score=305.11 Aligned_cols=232 Identities=23% Similarity=0.277 Sum_probs=206.0
Q ss_pred CcccceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCC
Q 022865 5 GQVITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~ 81 (291)
..+.+|||+++.+++. .+++++++.|.|+++||||||.+++||++|+.++.|.++.. .+|.++|||++|+|+++|++
T Consensus 18 ~~~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~ 97 (354)
T 2j8z_A 18 LYFQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPG 97 (354)
T ss_dssp ---CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSC
T ss_pred cchhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCC
Confidence 4568899999998886 38999999999999999999999999999999998876533 57899999999999999999
Q ss_pred C-CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccce
Q 022865 82 V-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSV 160 (291)
Q Consensus 82 ~-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 160 (291)
+ ++|++||+|+... .+ |+|+||+.++.+.+
T Consensus 98 v~~~~~vGdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~ 128 (354)
T 2j8z_A 98 CQGHWKIGDTAMALL-------------------------------PG------------------GGQAQYVTVPEGLL 128 (354)
T ss_dssp C--CCCTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGE
T ss_pred cCCCCCCCCEEEEec-------------------------------CC------------------CcceeEEEeCHHHc
Confidence 9 9999999997431 12 38999999999999
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
+++|+++++++|+++++++.|||+++.+..+++++++|||+|+ |++|++++|+++.+|+ +|++++++++++++++++|
T Consensus 129 ~~iP~~ls~~~aa~l~~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~g 207 (354)
T 2j8z_A 129 MPIPEGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAEKLG 207 (354)
T ss_dssp EECCTTCCHHHHTTSHHHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHhccchHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcC
Confidence 9999999999999999999999999888889999999999985 9999999999999999 8999999999999999999
Q ss_pred CCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 240 VTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 240 a~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++.++++.+ .++.+.+.+.+++ ++|++|||+|.+ .+..++++|+++|
T Consensus 208 ~~~~~~~~~--~~~~~~~~~~~~~~~~d~vi~~~G~~-~~~~~~~~l~~~G 255 (354)
T 2j8z_A 208 AAAGFNYKK--EDFSEATLKFTKGAGVNLILDCIGGS-YWEKNVNCLALDG 255 (354)
T ss_dssp CSEEEETTT--SCHHHHHHHHTTTSCEEEEEESSCGG-GHHHHHHHEEEEE
T ss_pred CcEEEecCC--hHHHHHHHHHhcCCCceEEEECCCch-HHHHHHHhccCCC
Confidence 999988775 5677788887766 899999999986 6899999999883
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-41 Score=307.61 Aligned_cols=226 Identities=22% Similarity=0.293 Sum_probs=197.8
Q ss_pred cceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
++|||+++.+++. .+++++++.|+|++|||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++|+++++
T Consensus 2 m~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~ 81 (349)
T 4a27_A 2 MEMRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKG 81 (349)
T ss_dssp CCEEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCS
T ss_pred ceeEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCC
Confidence 6899999999885 3999999999999999999999999999999999998653 478999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+... .+ |+|+||+.++.+.++++|
T Consensus 82 ~~~GdrV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~iP 112 (349)
T 4a27_A 82 YEIGDRVMAFV-------------------------------NY------------------NAWAEVVCTPVEFVYKIP 112 (349)
T ss_dssp CCTTCEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGEEECC
T ss_pred CCCCCEEEEec-------------------------------CC------------------CcceEEEEecHHHeEECC
Confidence 99999997442 12 389999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF 243 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~ 243 (291)
+++++++|+.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+|+++|..+|++++ +++++++++ +|++++
T Consensus 113 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~ga~~~ 190 (349)
T 4a27_A 113 DDMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-DSVTHL 190 (349)
T ss_dssp TTSCHHHHHTSHHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-GGSSEE
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-cCCcEE
Confidence 999999999999999999999888899999999999998 99999999999999755888886 667888888 999999
Q ss_pred eCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 244 VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 244 i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++ .+ .++.+.+++++++++|+||||+|++. +..++++|+++
T Consensus 191 ~~-~~--~~~~~~~~~~~~~g~Dvv~d~~g~~~-~~~~~~~l~~~ 231 (349)
T 4a27_A 191 FD-RN--ADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL 231 (349)
T ss_dssp EE-TT--SCHHHHHHHHCTTCEEEEEEECC--------CTTEEEE
T ss_pred Ec-CC--ccHHHHHHHhcCCCceEEEECCCchh-HHHHHHHhhcC
Confidence 98 43 57888888888779999999999976 58999999998
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=307.97 Aligned_cols=232 Identities=19% Similarity=0.242 Sum_probs=200.6
Q ss_pred ccceeEEEEecCCCC---eEEEeeecCCCC--CCeEEEEEeeeecchhhhhhhcCCCCC-CCCC---------cccccce
Q 022865 7 VITCKAAVAWEPNKP---LVIEDVQVAPPQ--AGEVRIKILFTALCHTDAYTWSGKDPE-GLFP---------CILGHEA 71 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~---~~~~~~~~~~~~--~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p---------~~~G~e~ 71 (291)
|++|||+++.+++++ +++++++.|.|. +|||||||++++||++|++++.|.++. ..+| .++|||+
T Consensus 1 ~~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~ 80 (364)
T 1gu7_A 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG 80 (364)
T ss_dssp CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred CceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCcee
Confidence 468999999999875 899999999887 999999999999999999999987653 2467 8999999
Q ss_pred eEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceee
Q 022865 72 AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ 151 (291)
Q Consensus 72 ~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 151 (291)
+|+|+++|+++++|++||+|+.... .+ |+|+|
T Consensus 81 ~G~V~~vG~~v~~~~vGdrV~~~~~------------------------------~~------------------G~~ae 112 (364)
T 1gu7_A 81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------NF------------------GTWRT 112 (364)
T ss_dssp EEEEEEECTTCCSCCTTCEEEESSS------------------------------CC------------------CCSBS
T ss_pred EEEEEEeCCCCCcCCCCCEEEecCC------------------------------CC------------------Ccchh
Confidence 9999999999999999999985431 12 39999
Q ss_pred eEEecccceEEcCC-----------CCChhhhhhhcccchhhhhhhhhhcCCCCC-CEEEEEcC-ChHHHHHHHHHHHcC
Q 022865 152 YTVVHDVSVAKIDP-----------QAPLDKVCLLGCGVPTGLGAVWNTAKVEPG-SIVAVFGL-GTVGLAVAEGAKAAG 218 (291)
Q Consensus 152 ~~~~~~~~~~~iP~-----------~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g-~~vlI~G~-g~vG~~ai~~a~~~g 218 (291)
|+.++.+.++++|+ ++++++|+++++++.|||+++.+..++++| ++|||+|+ |++|++++|+||++|
T Consensus 113 y~~v~~~~~~~~P~~~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~G 192 (364)
T 1gu7_A 113 HALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLN 192 (364)
T ss_dssp EEEEEGGGEEEECCHHHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHT
T ss_pred eEecCHHHeEEcCCccccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCC
Confidence 99999999999998 899999999999999999988776789999 99999998 999999999999999
Q ss_pred CCeEEEEcCChhh----HHHHHhcCCCEEeCCCCC-CchHHHHHHhhc--CC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 219 ASRVIGIDIDPKK----FDRAKNFGVTEFVNPKDH-DKPIQQVLVDLT--DG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 219 ~~~v~~~~~~~~~----~~~~~~~ga~~~i~~~~~-~~~~~~~v~~~~--~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ +++++.+++++ +++++++|+++++++++. ..++.+.+++++ ++ ++|+||||+|++... .++++|+++
T Consensus 193 a-~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~~~-~~~~~l~~~ 268 (364)
T 1gu7_A 193 F-NSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSST-GIARKLNNN 268 (364)
T ss_dssp C-EEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHH-HHHHTSCTT
T ss_pred C-EEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchhHH-HHHHHhccC
Confidence 9 77777665554 677899999999987531 135777888877 44 899999999997755 889999998
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=298.28 Aligned_cols=228 Identities=24% Similarity=0.326 Sum_probs=203.6
Q ss_pred ceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 9 TCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 9 ~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
+|||+++.+++.+ +++++++.|.|+++||||||.+++||++|++.+.|.++...+|.++|||++|+|+++|+++++|+
T Consensus 1 ~Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~ 80 (327)
T 1qor_A 1 MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIK 80 (327)
T ss_dssp -CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCC
T ss_pred CcEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence 3899999987753 88999999999999999999999999999999998765456899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|. ... . .+ |+|+||+.++.+.++++|++
T Consensus 81 ~GdrV~-~~g----~-------------------------~~------------------G~~aey~~v~~~~~~~iP~~ 112 (327)
T 1qor_A 81 AGDRVV-YAQ----S-------------------------AL------------------GAYSSVHNIIADKAAILPAA 112 (327)
T ss_dssp TTCEEE-ESC----C-------------------------SS------------------CCSBSEEEEEGGGEEECCTT
T ss_pred CCCEEE-ECC----C-------------------------CC------------------ceeeeEEEecHHHcEECCCC
Confidence 999994 210 0 11 38999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++|+++++++.|||+++.+..+++++++|||+|+ |++|++++|+++..|+ +|++++++++++++++++|++.+++
T Consensus 113 l~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T 1qor_A 113 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN 191 (327)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHcCCCEEEE
Confidence 9999999999999999999877889999999999995 9999999999999999 9999999999999999999999888
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+ .++.+.+.+.+.+ ++|++||++| ...++.++++|+++
T Consensus 192 ~~~--~~~~~~~~~~~~~~~~D~vi~~~g-~~~~~~~~~~l~~~ 232 (327)
T 1qor_A 192 YRE--EDLVERLKEITGGKKVRVVYDSVG-RDTWERSLDCLQRR 232 (327)
T ss_dssp TTT--SCHHHHHHHHTTTCCEEEEEECSC-GGGHHHHHHTEEEE
T ss_pred CCC--ccHHHHHHHHhCCCCceEEEECCc-hHHHHHHHHHhcCC
Confidence 765 5677778877766 8999999999 57799999999988
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=299.50 Aligned_cols=228 Identities=29% Similarity=0.456 Sum_probs=200.3
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-CC--CCCCcccccceeEEEEEeCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PE--GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~--~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
|||+++.+++.+ ++++++|.|+|+++||||||++++||++|++.+.|.+ +. ..+|.++|||++|+|+++|+.+++
T Consensus 2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~ 81 (333)
T 1wly_A 2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD 81 (333)
T ss_dssp CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence 899999988753 8899999999999999999999999999999998865 22 357999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+..+. .+ |+|+||+.++.+.++++|
T Consensus 82 ~~~GdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~~iP 113 (333)
T 1wly_A 82 FTVGERVCTCLP------------------------------PL------------------GAYSQERLYPAEKLIKVP 113 (333)
T ss_dssp CCTTCEEEECSS------------------------------SC------------------CCSBSEEEEEGGGCEECC
T ss_pred CCCCCEEEEecC------------------------------CC------------------CcceeEEEecHHHcEeCC
Confidence 999999974321 12 389999999999999999
Q ss_pred CCCChhh--hhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 165 PQAPLDK--VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 165 ~~~~~~~--aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+++++++ |+++++++.|||+++.+..+++++++|||+|+ |++|++++|+++.+|+ +|++++++++++++++++|++
T Consensus 114 ~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~~g~~ 192 (333)
T 1wly_A 114 KDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARKLGCH 192 (333)
T ss_dssp TTCCCCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHTCS
T ss_pred CCCChHHhCccchhhhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCC
Confidence 9999999 89999999999999877889999999999997 9999999999999999 999999999999999999999
Q ss_pred EEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 242 EFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 242 ~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.++++.+ .++.+.+.+.+.+ ++|++||++|. ..++.++++++++|
T Consensus 193 ~~~d~~~--~~~~~~i~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~G 238 (333)
T 1wly_A 193 HTINYST--QDFAEVVREITGGKGVDVVYDSIGK-DTLQKSLDCLRPRG 238 (333)
T ss_dssp EEEETTT--SCHHHHHHHHHTTCCEEEEEECSCT-TTHHHHHHTEEEEE
T ss_pred EEEECCC--HHHHHHHHHHhCCCCCeEEEECCcH-HHHHHHHHhhccCC
Confidence 8888765 5677778777765 89999999999 66999999999883
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-40 Score=303.47 Aligned_cols=230 Identities=23% Similarity=0.345 Sum_probs=195.7
Q ss_pred cccceeEEEEecCCCC---eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCC
Q 022865 6 QVITCKAAVAWEPNKP---LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~---~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~ 81 (291)
.|.+|||+++.+++.+ ++++++|.|.|+++||||||++++||++|++.+.|.++.. .+|.++|||++|+|+++|++
T Consensus 23 m~~~mka~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~ 102 (357)
T 1zsy_A 23 MPARVRALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVAVGSN 102 (357)
T ss_dssp CCCCEEEEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEEECTT
T ss_pred CchhhEEEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEEeCCC
Confidence 4567999999999875 8899999999999999999999999999999999876543 57999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
+++|++||+|+..+. .+ |+|+||+.++.+.++
T Consensus 103 v~~~~vGdrV~~~~~------------------------------~~------------------G~~aey~~v~~~~~~ 134 (357)
T 1zsy_A 103 VTGLKPGDWVIPANA------------------------------GL------------------GTWRTEAVFSEEALI 134 (357)
T ss_dssp CCSCCTTCEEEESSS------------------------------CS------------------CCSBSEEEEEGGGEE
T ss_pred CCCCCCCCEEEEcCC------------------------------CC------------------ccceeEEecCHHHcE
Confidence 999999999985431 12 399999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-h---hhHHHHH
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-P---KKFDRAK 236 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~---~~~~~~~ 236 (291)
++|+++++++|+++++++.|||+++.+..++++|++|||+|+ |++|++++|+||++|+ +++++..+ + +++++++
T Consensus 135 ~iP~~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~~~ 213 (357)
T 1zsy_A 135 QVPSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDRPDIQKLSDRLK 213 (357)
T ss_dssp EECSSSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCCSCHHHHHHHHH
T ss_pred ECCCCCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCccchHHHHHHHH
Confidence 999999999999999889999998878889999999999998 9999999999999999 55555433 3 3578899
Q ss_pred hcCCCEEeCCCCCCchHHHHHHhhcCC--CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG--GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 237 ~~ga~~~i~~~~~~~~~~~~v~~~~~g--g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++|++.++++++ ...+.+.+.+.+ ++|+||||+|++. ...++++++++
T Consensus 214 ~lGa~~vi~~~~---~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~ 263 (357)
T 1zsy_A 214 SLGAEHVITEEE---LRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARG 263 (357)
T ss_dssp HTTCSEEEEHHH---HHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTT
T ss_pred hcCCcEEEecCc---chHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCC
Confidence 999999987642 111234555544 5999999999876 46789999988
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=299.96 Aligned_cols=228 Identities=18% Similarity=0.210 Sum_probs=196.4
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++.+++++ ++++++|.|+|++|||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++| +++|+
T Consensus 1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~ 78 (324)
T 3nx4_A 1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH 78 (324)
T ss_dssp CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence 899999999875 889999999999999999999999999999999987754 4789999999999999999 57899
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|++.+. ..|. ...|+|+||+.++.+.++++|++
T Consensus 79 vGdrV~~~~~------------------------~~g~-------------------~~~G~~aey~~v~~~~~~~iP~~ 115 (324)
T 3nx4_A 79 AGQEVLLTGW------------------------GVGE-------------------NHWGGLAERARVKGDWLVALPAG 115 (324)
T ss_dssp TTCEEEEECT------------------------TBTT-------------------TBCCSSBSEEEECGGGCEECCTT
T ss_pred CCCEEEEccc------------------------ccCC-------------------CCCCceeeEEecCHHHcEECCCC
Confidence 9999986531 0111 11249999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhh--hhcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~--~~~~~~~g~-~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+++++|+++++.+.|||.++. ...++++++ +|||+|+ |++|++++|+|+++|+ +|++++++++|+++++++|+++
T Consensus 116 ~~~~~aa~l~~~~~ta~~al~~~~~~~~~~~~g~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~ 194 (324)
T 3nx4_A 116 LSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKSLGANR 194 (324)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHhhhcccCCCCCeEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhcCCCE
Confidence 999999999999999998875 345566632 4999998 9999999999999999 9999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++++.+ . +++++++++|+||||+|++ .++.++++|+++|
T Consensus 195 vi~~~~~~--~---~~~~~~~~~d~v~d~~g~~-~~~~~~~~l~~~G 235 (324)
T 3nx4_A 195 ILSRDEFA--E---SRPLEKQLWAGAIDTVGDK-VLAKVLAQMNYGG 235 (324)
T ss_dssp EEEGGGSS--C---CCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEE
T ss_pred EEecCCHH--H---HHhhcCCCccEEEECCCcH-HHHHHHHHHhcCC
Confidence 99876522 1 4556666999999999986 6999999999983
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-40 Score=300.45 Aligned_cols=231 Identities=20% Similarity=0.227 Sum_probs=200.2
Q ss_pred cccceeEEEEecCCCC--eEE-EeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCC-------------C--CCCCcc
Q 022865 6 QVITCKAAVAWEPNKP--LVI-EDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP-------------E--GLFPCI 66 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~--~~~-~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~-------------~--~~~p~~ 66 (291)
.+.+|||+++.+++.+ +++ +++|.|.| +++||||||++++||++|++++.|..+ . ..+|.+
T Consensus 18 ~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~P~v 97 (375)
T 2vn8_A 18 LYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEFPLT 97 (375)
T ss_dssp CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTCSBC
T ss_pred cCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccCCcc
Confidence 4578999999998753 888 89999985 999999999999999999999987531 1 237999
Q ss_pred cccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCC
Q 022865 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGT 146 (291)
Q Consensus 67 ~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~ 146 (291)
+|||++|+|+++|+++++|++||+|+..+... .+
T Consensus 98 ~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~~----------------------------~~------------------ 131 (375)
T 2vn8_A 98 LGRDVSGVVMECGLDVKYFKPGDEVWAAVPPW----------------------------KQ------------------ 131 (375)
T ss_dssp CCCEEEEEEEEECTTCCSCCTTCEEEEECCTT----------------------------SC------------------
T ss_pred cceeeeEEEEEeCCCCCCCCCCCEEEEecCCC----------------------------CC------------------
Confidence 99999999999999999999999998653200 12
Q ss_pred cceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcC----CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCe
Q 022865 147 STFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK----VEPGSIVAVFGL-GTVGLAVAEGAKAAGASR 221 (291)
Q Consensus 147 g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~----~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~ 221 (291)
|+|+||+.++.+.++++|+++++++|+++++++.|||+++.+..+ +++|++|||+|+ |++|++++|+|+++|+ +
T Consensus 132 G~~aey~~v~~~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~ 210 (375)
T 2vn8_A 132 GTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDA-H 210 (375)
T ss_dssp CSSBSEEEEEGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTC-E
T ss_pred ccceeEEEEcHHHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCC-E
Confidence 399999999999999999999999999999899999999877788 899999999995 9999999999999999 8
Q ss_pred EEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 222 VIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 222 v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
|++++ +++++++++++|++.++++.+ .++.+.+.+. +++|+||||+|.+ ..+..++++++++
T Consensus 211 Vi~~~-~~~~~~~~~~lGa~~v~~~~~--~~~~~~~~~~--~g~D~vid~~g~~~~~~~~~~~~l~~~ 273 (375)
T 2vn8_A 211 VTAVC-SQDASELVRKLGADDVIDYKS--GSVEEQLKSL--KPFDFILDNVGGSTETWAPDFLKKWSG 273 (375)
T ss_dssp EEEEE-CGGGHHHHHHTTCSEEEETTS--SCHHHHHHTS--CCBSEEEESSCTTHHHHGGGGBCSSSC
T ss_pred EEEEe-ChHHHHHHHHcCCCEEEECCc--hHHHHHHhhc--CCCCEEEECCCChhhhhHHHHHhhcCC
Confidence 99987 678999999999999998875 4565566553 4799999999997 5678899999988
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=296.92 Aligned_cols=226 Identities=21% Similarity=0.237 Sum_probs=201.1
Q ss_pred ccceeEEEEecCCC----CeEE-EeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCC
Q 022865 7 VITCKAAVAWEPNK----PLVI-EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGE 80 (291)
Q Consensus 7 ~~~~~a~~~~~~~~----~~~~-~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~ 80 (291)
+.+|||+++.+++. .+++ +++|.|.|++|||||||++++||++|++++.|.++. ..+|.++|||++|+|+++|+
T Consensus 21 ~~~MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~ 100 (362)
T 2c0c_A 21 QSMMQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGL 100 (362)
T ss_dssp CCEEEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECT
T ss_pred hhhceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECC
Confidence 46799999999874 4889 999999999999999999999999999999887643 36899999999999999999
Q ss_pred CCC-CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc
Q 022865 81 GVT-EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (291)
Q Consensus 81 ~~~-~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 159 (291)
+++ +|++||+|+... + |+|+||+.++.+.
T Consensus 101 ~V~~~~~vGdrV~~~~--------------------------------~------------------G~~aey~~v~~~~ 130 (362)
T 2c0c_A 101 SASARYTVGQAVAYMA--------------------------------P------------------GSFAEYTVVPASI 130 (362)
T ss_dssp TGGGTCCTTCEEEEEC--------------------------------S------------------CCSBSEEEEEGGG
T ss_pred CccCCCCCCCEEEEcc--------------------------------C------------------CcceeEEEEcHHH
Confidence 999 999999997431 1 3999999999999
Q ss_pred eEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
++++|+. + .+++++++++.|||+++.+..+++++++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++
T Consensus 131 ~~~~P~~-~-~~aaal~~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~ 207 (362)
T 2c0c_A 131 ATPVPSV-K-PEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKSL 207 (362)
T ss_dssp CEECSSS-C-HHHHTTTTHHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHT
T ss_pred eEECCCC-c-hHhhcccchHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHc
Confidence 9999996 3 4567778899999999888889999999999995 9999999999999999 899999999999999999
Q ss_pred CCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 239 GVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 239 ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|++.++++.+ .++.+.+.+.+++++|+||||+|. ..++.++++++++
T Consensus 208 Ga~~~~~~~~--~~~~~~~~~~~~~g~D~vid~~g~-~~~~~~~~~l~~~ 254 (362)
T 2c0c_A 208 GCDRPINYKT--EPVGTVLKQEYPEGVDVVYESVGG-AMFDLAVDALATK 254 (362)
T ss_dssp TCSEEEETTT--SCHHHHHHHHCTTCEEEEEECSCT-HHHHHHHHHEEEE
T ss_pred CCcEEEecCC--hhHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHHhcC
Confidence 9999998865 456777777765589999999998 5699999999988
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=304.28 Aligned_cols=225 Identities=19% Similarity=0.215 Sum_probs=200.4
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---------------------------
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------------------------- 59 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------------------------- 59 (291)
..+|||++.......+++++++.|+|++|||||||++++||++|++++.|.++
T Consensus 5 ~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~~~~ 84 (379)
T 3iup_A 5 ALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAMRSM 84 (379)
T ss_dssp EEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHHHHH
T ss_pred hhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCcccccccc
Confidence 57899999875555699999999999999999999999999999999988521
Q ss_pred --CCCCCcccccceeEEEEEeCCCC-CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccC
Q 022865 60 --EGLFPCILGHEAAGIVESVGEGV-TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN 136 (291)
Q Consensus 60 --~~~~p~~~G~e~~G~Vv~~G~~~-~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~ 136 (291)
...+|.++|||++|+|+++|+++ ++|++||+|+..+ +
T Consensus 85 ~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------~-------- 124 (379)
T 3iup_A 85 AGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAIG--------------------------------G-------- 124 (379)
T ss_dssp GGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEECC--------------------------------S--------
T ss_pred ccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEecC--------------------------------C--------
Confidence 23578999999999999999999 8899999998442 1
Q ss_pred CCceecccCCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE--cCChHHHHHHHHH
Q 022865 137 GKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGA 214 (291)
Q Consensus 137 ~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~--G~g~vG~~ai~~a 214 (291)
|+|+||+.++.+.++++|+++++++|+.+++...|||+++ +... +++++|||+ |+|++|++++|+|
T Consensus 125 ----------G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~-~~~~-~~g~~vlV~gag~G~vG~~a~q~a 192 (379)
T 3iup_A 125 ----------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMV-ETMR-LEGHSALVHTAAASNLGQMLNQIC 192 (379)
T ss_dssp ----------CCSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHH-HHHH-HTTCSCEEESSTTSHHHHHHHHHH
T ss_pred ----------CcceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHH-HHhc-cCCCEEEEECCCCCHHHHHHHHHH
Confidence 3999999999999999999999999999999999999765 4444 899999999 5599999999999
Q ss_pred HHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhh
Q 022865 215 KAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 215 ~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~ 286 (291)
+++|+ +|++++++++|+++++++|+++++++++ .++.+.+++++++ ++|+||||+|++..+..++++++
T Consensus 193 ~~~Ga-~Vi~~~~~~~~~~~~~~lGa~~~~~~~~--~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~ 262 (379)
T 3iup_A 193 LKDGI-KLVNIVRKQEQADLLKAQGAVHVCNAAS--PTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCME 262 (379)
T ss_dssp HHHTC-CEEEEESSHHHHHHHHHTTCSCEEETTS--TTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHH
T ss_pred HHCCC-EEEEEECCHHHHHHHHhCCCcEEEeCCC--hHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcc
Confidence 99999 8999999999999999999999999876 6788899998887 99999999999888889999886
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-39 Score=289.78 Aligned_cols=231 Identities=17% Similarity=0.201 Sum_probs=191.7
Q ss_pred cceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+|||+++.+++. .++++++|.|+|+++||||||.+++||++|++.+.|.++. ..+|.++|||++|+|++. .+++
T Consensus 2 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~ 79 (328)
T 1xa0_A 2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPR 79 (328)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSS
T ss_pred CcceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCC
Confidence 3699999998874 4889999999999999999999999999999998886432 357999999999999996 4678
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||+..... .|. ...|+|+||+.++.+.++++|
T Consensus 80 ~~vGdrV~~~~~~------------------------~g~-------------------~~~G~~aey~~v~~~~~~~~P 116 (328)
T 1xa0_A 80 FREGDEVIATGYE------------------------IGV-------------------THFGGYSEYARLHGEWLVPLP 116 (328)
T ss_dssp CCTTCEEEEESTT------------------------BTT-------------------TBCCSSBSEEEECGGGCEECC
T ss_pred CCCCCEEEEcccc------------------------CCC-------------------CCCccceeEEEechHHeEECC
Confidence 9999999854210 010 112499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhh--hhcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~--~~~~~~~g~-~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+++++++|+++++++.|+|.++. ...++++++ +|||+|+ |++|++++|+|+++|+ +|++++++++++++++++|+
T Consensus 117 ~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa 195 (328)
T 1xa0_A 117 KGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGA 195 (328)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTC
T ss_pred CCCCHHHhhhhhhhHHHHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCC
Confidence 99999999999999999998764 346788886 9999998 9999999999999999 79999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++++++.+. + .+.+.+++++++|+|||++|++ .+..++++++++
T Consensus 196 ~~~i~~~~~--~-~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~ 239 (328)
T 1xa0_A 196 KEVLAREDV--M-AERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYG 239 (328)
T ss_dssp SEEEECC------------CCSCCEEEEEECSTTT-THHHHHHTEEEE
T ss_pred cEEEecCCc--H-HHHHHHhcCCcccEEEECCcHH-HHHHHHHhhccC
Confidence 999987642 1 2345555555899999999985 699999999988
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-38 Score=284.36 Aligned_cols=222 Identities=18% Similarity=0.206 Sum_probs=196.2
Q ss_pred cceeEEEEec------CCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccc----eeEEEEE
Q 022865 8 ITCKAAVAWE------PNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE----AAGIVES 77 (291)
Q Consensus 8 ~~~~a~~~~~------~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e----~~G~Vv~ 77 (291)
++|||+++.. ..+.++++++|.|+|++|||||||++++||++|+..+.+... ..+|.++||| ++|+|++
T Consensus 6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~ 84 (336)
T 4b7c_A 6 QINRQYQLAQRPSGLPGRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLV 84 (336)
T ss_dssp CEEEEEEECSCCSSSCCTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEE
T ss_pred ccccEEEEEecCCCCCCCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEe
Confidence 6799999985 224599999999999999999999999999999988876432 2457777887 7999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 78 ~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
. .+++|++||||+.. |+|+||+.++.
T Consensus 85 ~--~v~~~~vGdrV~~~----------------------------------------------------G~~aey~~v~~ 110 (336)
T 4b7c_A 85 S--KHPGFQAGDYVNGA----------------------------------------------------LGVQDYFIGEP 110 (336)
T ss_dssp E--CSTTCCTTCEEEEE----------------------------------------------------CCSBSEEEECC
T ss_pred c--CCCCCCCCCEEecc----------------------------------------------------CCceEEEEech
Confidence 4 47889999999722 28999999999
Q ss_pred cceEEcCCCCChhhh--hhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 022865 158 VSVAKIDPQAPLDKV--CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (291)
Q Consensus 158 ~~~~~iP~~~~~~~a--a~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~ 234 (291)
+.++++|+++++.++ +.+++++.|||+++.+..+++++++|||+|+ |++|++++|+++.+|+ +|++++++++++++
T Consensus 111 ~~~~~~P~~~~~~~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~ 189 (336)
T 4b7c_A 111 KGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRF 189 (336)
T ss_dssp TTCEEECTTTSCGGGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHH
T ss_pred HHeEEcCCCCCchHHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHH
Confidence 999999999977776 6788899999999888899999999999998 9999999999999999 99999999999999
Q ss_pred H-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 235 A-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 235 ~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ +++|++.++++.+ .++.+.+.+.+++++|++||++|. ..+..++++++++
T Consensus 190 ~~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~ 241 (336)
T 4b7c_A 190 LVEELGFDGAIDYKN--EDLAAGLKRECPKGIDVFFDNVGG-EILDTVLTRIAFK 241 (336)
T ss_dssp HHHTTCCSEEEETTT--SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE
T ss_pred HHHHcCCCEEEECCC--HHHHHHHHHhcCCCceEEEECCCc-chHHHHHHHHhhC
Confidence 9 8999999998876 668888888886699999999997 5699999999988
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=290.56 Aligned_cols=232 Identities=20% Similarity=0.210 Sum_probs=193.6
Q ss_pred cceeEEEEecCCC--CeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNK--PLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~--~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+|||+++.+++. .++++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+++| +++
T Consensus 3 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v~~ 80 (330)
T 1tt7_A 3 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--DPR 80 (330)
T ss_dssp CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--STT
T ss_pred CcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--CCC
Confidence 4799999998763 5899999999999999999999999999999999886543 3679999999999999964 578
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||++.... .|. ...|+|+||+.++.+.++++|
T Consensus 81 ~~vGdrV~~~~~~------------------------~g~-------------------~~~G~~aey~~v~~~~~~~iP 117 (330)
T 1tt7_A 81 FAEGDEVIATSYE------------------------LGV-------------------SRDGGLSEYASVPGDWLVPLP 117 (330)
T ss_dssp CCTTCEEEEESTT------------------------BTT-------------------TBCCSSBSSEEECGGGEEECC
T ss_pred CCCCCEEEEcccc------------------------cCC-------------------CCCccceeEEEecHHHeEECC
Confidence 9999999865310 111 112499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhh--hhcCCCCCC-EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVW--NTAKVEPGS-IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~--~~~~~~~g~-~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+++++++|+++++++.|+|.++. ...++++++ +|||+|+ |++|++++|+|+++|+ +|++++++++++++++++|+
T Consensus 118 ~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~lGa 196 (330)
T 1tt7_A 118 QNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGA 196 (330)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTC
T ss_pred CCCCHHHHhhccchHHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC
Confidence 99999999999988999998764 346788886 9999998 9999999999999999 79999999999999999999
Q ss_pred CEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 241 TEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 241 ~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.++++++.+ .+.+.+++++++|+||||+|++ .+..++++++++|
T Consensus 197 ~~v~~~~~~~---~~~~~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G 241 (330)
T 1tt7_A 197 SEVISREDVY---DGTLKALSKQQWQGAVDPVGGK-QLASLLSKIQYGG 241 (330)
T ss_dssp SEEEEHHHHC---SSCCCSSCCCCEEEEEESCCTH-HHHHHHTTEEEEE
T ss_pred cEEEECCCch---HHHHHHhhcCCccEEEECCcHH-HHHHHHHhhcCCC
Confidence 9988764311 1123334444899999999994 6999999999883
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=283.24 Aligned_cols=228 Identities=19% Similarity=0.286 Sum_probs=197.0
Q ss_pred CCcccceeEEEE-ecC---C----CCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcC----CCC-CCCCCccccc
Q 022865 4 EGQVITCKAAVA-WEP---N----KPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSG----KDP-EGLFPCILGH 69 (291)
Q Consensus 4 ~~~~~~~~a~~~-~~~---~----~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g----~~~-~~~~p~~~G~ 69 (291)
+..|++|||+++ ..+ | +.++++++|.|.| +++||||||++++||++|+..+.+ .+. +..+|.++||
T Consensus 3 ~~~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~ 82 (357)
T 2zb4_A 3 AAAAMIVQRVVLNSRPGKNGNPVAENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG 82 (357)
T ss_dssp ---CCEEEEEEECCCCCTTSCCCGGGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred CcccccceEEEEeccCCCCCCCCcCceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence 457789999999 555 4 3499999999999 999999999999999999987765 232 3367899999
Q ss_pred ceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcce
Q 022865 70 EAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTF 149 (291)
Q Consensus 70 e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~ 149 (291)
|++|+|++ +++++|++||+|+... |+|
T Consensus 83 E~~G~V~~--~~v~~~~vGdrV~~~~---------------------------------------------------G~~ 109 (357)
T 2zb4_A 83 GGIGIIEE--SKHTNLTKGDFVTSFY---------------------------------------------------WPW 109 (357)
T ss_dssp EEEEEEEE--ECSTTCCTTCEEEEEE---------------------------------------------------EES
T ss_pred cEEEEEEe--cCCCCCCCCCEEEecC---------------------------------------------------CCc
Confidence 99999999 8889999999997331 389
Q ss_pred eeeEEecccceEEcCCCC-----ChhhhhhhcccchhhhhhhhhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCe
Q 022865 150 SQYTVVHDVSVAKIDPQA-----PLDKVCLLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASR 221 (291)
Q Consensus 150 ~~~~~~~~~~~~~iP~~~-----~~~~aa~l~~~~~ta~~~~~~~~~~~~g--~~vlI~G~-g~vG~~ai~~a~~~g~~~ 221 (291)
+||+.++.+.++++|+++ +++ ++++++++.|||+++.+..+++++ ++|||+|+ |++|++++|+++.+|+.+
T Consensus 110 aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~ 188 (357)
T 2zb4_A 110 QTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSR 188 (357)
T ss_dssp BSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSE
T ss_pred EEEEEEchHHceecCcccccCchhHH-HHhcccHHHHHHHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCe
Confidence 999999999999999998 555 677888999999998788999999 99999998 999999999999999878
Q ss_pred EEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 222 VIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 222 v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
|+++++++++++.+++ +|++.++++.+ .++.+.+.+.+.+++|++||++|. ..+..++++|+++
T Consensus 189 Vi~~~~~~~~~~~~~~~~g~~~~~d~~~--~~~~~~~~~~~~~~~d~vi~~~G~-~~~~~~~~~l~~~ 253 (357)
T 2zb4_A 189 VVGICGTHEKCILLTSELGFDAAINYKK--DNVAEQLRESCPAGVDVYFDNVGG-NISDTVISQMNEN 253 (357)
T ss_dssp EEEEESCHHHHHHHHHTSCCSEEEETTT--SCHHHHHHHHCTTCEEEEEESCCH-HHHHHHHHTEEEE
T ss_pred EEEEeCCHHHHHHHHHHcCCceEEecCc--hHHHHHHHHhcCCCCCEEEECCCH-HHHHHHHHHhccC
Confidence 9999999999999886 99999988775 567777888776689999999997 6699999999988
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=264.07 Aligned_cols=209 Identities=21% Similarity=0.244 Sum_probs=183.2
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.+++++..++++|.|+|+++||||||++++||++|++.+.|.++. ..+|.++|||++|+|+ |
T Consensus 1 Mka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------G 69 (302)
T 1iz0_A 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------G 69 (302)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------T
T ss_pred CeEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------C
Confidence 799999999886667799999999999999999999999999999986653 3689999999999998 9
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+... .+ |+|+||+.++.+.++++|++++
T Consensus 70 drV~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~iP~~~~ 100 (302)
T 1iz0_A 70 RRYAALV-------------------------------PQ------------------GGLAERVAVPKGALLPLPEGLS 100 (302)
T ss_dssp EEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred cEEEEec-------------------------------CC------------------cceeeEEEEcHHHcEeCCCCCC
Confidence 9997542 12 3899999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+++++++++++.|||+++.+.. +++|++|||+|+ |++|++++|+|+.+|+ +|++++++++++++++++|++.++++.
T Consensus 101 ~~~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~~ga~~~~~~~ 178 (302)
T 1iz0_A 101 PEEAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAATYA 178 (302)
T ss_dssp HHHHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEEGG
T ss_pred HHHHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHhcCCCEEEECC
Confidence 9999999999999999987677 999999999998 9999999999999999 999999999999999999999888764
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+. .++.+.+ +++|+||| +|. ..+..++++++++
T Consensus 179 ~~-~~~~~~~-----~~~d~vid-~g~-~~~~~~~~~l~~~ 211 (302)
T 1iz0_A 179 EV-PERAKAW-----GGLDLVLE-VRG-KEVEESLGLLAHG 211 (302)
T ss_dssp GH-HHHHHHT-----TSEEEEEE-CSC-TTHHHHHTTEEEE
T ss_pred cc-hhHHHHh-----cCceEEEE-CCH-HHHHHHHHhhccC
Confidence 20 2232222 57999999 998 5699999999988
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=295.12 Aligned_cols=220 Identities=25% Similarity=0.332 Sum_probs=193.2
Q ss_pred eEEEEecCCC--CeEEEeeec--CCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 11 KAAVAWEPNK--PLVIEDVQV--APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 11 ~a~~~~~~~~--~~~~~~~~~--~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
..+.+..+|. .+++++.+. |+|++|||+|||+++|||++|+.++.|.++ .|.++|||++|+|+++|+++++|+
T Consensus 211 ~~l~~~~~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~ 287 (795)
T 3slk_A 211 WRLEATRPGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLA 287 (795)
T ss_dssp CCEEESSTTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSC
T ss_pred EEEecCCCCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCC
Confidence 3455555554 388877764 568999999999999999999999988764 356899999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+... + |+|++|+.++.+.++++|++
T Consensus 288 vGDrV~~~~--------------------------------~------------------G~~ae~~~v~~~~~~~iP~~ 317 (795)
T 3slk_A 288 PGDRVMGMI--------------------------------P------------------KAFGPLAVADHRMVTRIPAG 317 (795)
T ss_dssp TTCEEEECC--------------------------------S------------------SCSSSEEEEETTSEEECCTT
T ss_pred CCCEEEEEe--------------------------------c------------------CCCcCEEEeehHHEEECCCC
Confidence 999997431 2 38999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++|+.+++++.|+|+++.+..++++|++|||+|+ |++|++++|+||++|+ +|+++++++ |.++++ +|++++++
T Consensus 318 ls~~~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~-k~~~l~-lga~~v~~ 394 (795)
T 3slk_A 318 WSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED-KWQAVE-LSREHLAS 394 (795)
T ss_dssp CCHHHHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG-GGGGSC-SCGGGEEC
T ss_pred CCHHHHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH-Hhhhhh-cChhheee
Confidence 9999999999999999999988999999999999997 9999999999999999 899997665 666655 99999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++ .++.+.+++.+++ |+|+|||++|++ .+..++++|+++|
T Consensus 395 ~~~--~~~~~~i~~~t~g~GvDvVld~~gg~-~~~~~l~~l~~~G 436 (795)
T 3slk_A 395 SRT--CDFEQQFLGATGGRGVDVVLNSLAGE-FADASLRMLPRGG 436 (795)
T ss_dssp SSS--STHHHHHHHHSCSSCCSEEEECCCTT-TTHHHHTSCTTCE
T ss_pred cCC--hhHHHHHHHHcCCCCeEEEEECCCcH-HHHHHHHHhcCCC
Confidence 876 6788999999988 999999999984 5899999999993
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=258.80 Aligned_cols=222 Identities=19% Similarity=0.230 Sum_probs=189.2
Q ss_pred cccceeEEEEecC--C----CCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeC
Q 022865 6 QVITCKAAVAWEP--N----KPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVG 79 (291)
Q Consensus 6 ~~~~~~a~~~~~~--~----~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G 79 (291)
.+++||++++.+. | +.+++++++.|+|++|||||||++++||+.|+.+ . .+..+|.++|||.+|+|++.
T Consensus 4 ~~~~mka~~~~~~~~g~~~~~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~- 78 (333)
T 1v3u_A 4 FMVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES- 78 (333)
T ss_dssp CCCEEEEEEECC-----CCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE-
T ss_pred ccccccEEEEeecCCCCCCccceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec-
Confidence 4578999999875 3 3489999999999999999999999999998732 1 12356789999999999995
Q ss_pred CCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccc
Q 022865 80 EGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS 159 (291)
Q Consensus 80 ~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 159 (291)
.+++|++||||+.. |+|+||+.++.+.
T Consensus 79 -~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~~~ 105 (333)
T 1v3u_A 79 -KNSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKG 105 (333)
T ss_dssp -SCTTSCTTCEEEEC----------------------------------------------------CCSBSEEEESSTT
T ss_pred -CCCCCCCCCEEEec----------------------------------------------------CceEEEEEechHH
Confidence 57889999999732 2899999999999
Q ss_pred eEEcCCC----CChhh-hhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 160 VAKIDPQ----APLDK-VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 160 ~~~iP~~----~~~~~-aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
++++|++ +++++ ++++++++.|||+++.+..+++++++|||+|+ |++|++++|+++..|+ +|+++++++++++
T Consensus 106 ~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~ 184 (333)
T 1v3u_A 106 LEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIA 184 (333)
T ss_dssp EEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHH
T ss_pred eEEcCcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHH
Confidence 9999997 88887 47888899999999878889999999999998 9999999999999999 9999999999999
Q ss_pred HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 234 ~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++++|++.++++.+. .++.+.+.+.+.+++|++||++|.+ .+..++++|+++
T Consensus 185 ~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~ 237 (333)
T 1v3u_A 185 YLKQIGFDAAFNYKTV-NSLEEALKKASPDGYDCYFDNVGGE-FLNTVLSQMKDF 237 (333)
T ss_dssp HHHHTTCSEEEETTSC-SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEE
T ss_pred HHHhcCCcEEEecCCH-HHHHHHHHHHhCCCCeEEEECCChH-HHHHHHHHHhcC
Confidence 9999999888877541 3566777777666899999999985 589999999988
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=262.28 Aligned_cols=224 Identities=22% Similarity=0.257 Sum_probs=183.2
Q ss_pred cceeEEEEecCCC-CeEEE--eeecCC-CCCCeEEEEEeeeecchhhhhhhcCCCCC----CCCCcccccceeEEEEE--
Q 022865 8 ITCKAAVAWEPNK-PLVIE--DVQVAP-PQAGEVRIKILFTALCHTDAYTWSGKDPE----GLFPCILGHEAAGIVES-- 77 (291)
Q Consensus 8 ~~~~a~~~~~~~~-~~~~~--~~~~~~-~~~~evlVkv~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~Vv~-- 77 (291)
..|+++++.++++ .++++ +++.|. |++|||||||.++++|+.|. .+.|.... ..+|.++|||.+|++++
T Consensus 8 ~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G~~~~Gv 86 (345)
T 2j3h_A 8 VILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQGYGVSRI 86 (345)
T ss_dssp EEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEEEEEEEE
T ss_pred EEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeecceEEEE
Confidence 3344444444443 48888 888887 89999999999999988875 34454322 24689999999999999
Q ss_pred eCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 78 VGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 78 ~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
+|+.+++|++||+|+.. |+|+||+.++.
T Consensus 87 V~~~v~~~~vGdrV~~~----------------------------------------------------g~~aey~~v~~ 114 (345)
T 2j3h_A 87 IESGHPDYKKGDLLWGI----------------------------------------------------VAWEEYSVITP 114 (345)
T ss_dssp EEECSTTCCTTCEEEEE----------------------------------------------------EESBSEEEECC
T ss_pred EecCCCCCCCCCEEEee----------------------------------------------------cCceeEEEecc
Confidence 99999999999999722 28999999987
Q ss_pred cc--eEEcCC---CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 158 VS--VAKIDP---QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 158 ~~--~~~iP~---~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
+. ++++|+ +++++ ++++++++.|||+++.+..+++++++|||+|+ |++|++++|+++.+|+ +|+++++++++
T Consensus 115 ~~~~~~~ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~ 192 (345)
T 2j3h_A 115 MTHAHFKIQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEK 192 (345)
T ss_dssp CTTTCEEECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHH
T ss_pred cccceeecCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH
Confidence 76 999996 35555 67788899999999878889999999999997 9999999999999999 99999999999
Q ss_pred HHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 232 FDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 232 ~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++++ ++|++.++++.+. .++.+.+.+.+++++|++||++|. ..+..++++|+++
T Consensus 193 ~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~ 248 (345)
T 2j3h_A 193 VDLLKTKFGFDDAFNYKEE-SDLTAALKRCFPNGIDIYFENVGG-KMLDAVLVNMNMH 248 (345)
T ss_dssp HHHHHHTSCCSEEEETTSC-SCSHHHHHHHCTTCEEEEEESSCH-HHHHHHHTTEEEE
T ss_pred HHHHHHHcCCceEEecCCH-HHHHHHHHHHhCCCCcEEEECCCH-HHHHHHHHHHhcC
Confidence 99998 7999998887642 356667777765689999999998 5799999999988
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-26 Score=245.47 Aligned_cols=205 Identities=19% Similarity=0.235 Sum_probs=176.2
Q ss_pred eEEEeeecCC-CC--CCeEEEEEeeeecchhhhhhhcCCCCCC-------CCCcccccceeEEEEEeCCCCCCCCCCCEE
Q 022865 22 LVIEDVQVAP-PQ--AGEVRIKILFTALCHTDAYTWSGKDPEG-------LFPCILGHEAAGIVESVGEGVTEVQPGDHV 91 (291)
Q Consensus 22 ~~~~~~~~~~-~~--~~evlVkv~~~~i~~~D~~~~~g~~~~~-------~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd~V 91 (291)
+.+.+.+... +. ++||+|||.++|+|+.|+.+..|..+.. ..|.++|+|++|+|. +||+|
T Consensus 1544 l~~~~~~~~~~~~l~~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V~----------vGdrV 1613 (2512)
T 2vz8_A 1544 IRWVCSPLHYALPASCQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRDA----------SGRRV 1613 (2512)
T ss_dssp EEEEECTTTTCCCHHHHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEET----------TSCCE
T ss_pred eEEEecCcccccCCCCCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEEc----------cCCEE
Confidence 5555554333 22 7999999999999999999998875432 246789999999873 79999
Q ss_pred eecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCChhh
Q 022865 92 IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDK 171 (291)
Q Consensus 92 ~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~ 171 (291)
+... .+ |+|++|+.++.+.++++|+++++++
T Consensus 1614 ~g~~-------------------------------~~------------------G~~Aeyv~vp~~~v~~iPd~ls~~e 1644 (2512)
T 2vz8_A 1614 MGMV-------------------------------PA------------------EGLATSVLLLQHATWEVPSTWTLEE 1644 (2512)
T ss_dssp EEEC-------------------------------SS------------------CCSBSEEECCGGGEEECCTTSCHHH
T ss_pred EEee-------------------------------cC------------------CceeeEEEcccceEEEeCCCCCHHH
Confidence 7432 12 3899999999999999999999999
Q ss_pred hhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCC
Q 022865 172 VCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNP 246 (291)
Q Consensus 172 aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~ 246 (291)
|+.+++++.|+|+++....++++|++|||+|+ |++|++++|+||++|+ +|++++.+++|++++++ +|+++++++
T Consensus 1645 AA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~~~~~lga~~v~~~ 1723 (2512)
T 2vz8_A 1645 AASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQARFPQLDETCFANS 1723 (2512)
T ss_dssp HTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTCCSTTEEES
T ss_pred HHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHhhcCCCCceEEecC
Confidence 99999999999999988899999999999986 9999999999999999 89999999999999986 788889888
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+ .++.+.+++.+++ |+|+|||+++. ..+..++++|+++|
T Consensus 1724 ~~--~~~~~~i~~~t~g~GvDvVld~~g~-~~l~~~l~~L~~~G 1764 (2512)
T 2vz8_A 1724 RD--TSFEQHVLRHTAGKGVDLVLNSLAE-EKLQASVRCLAQHG 1764 (2512)
T ss_dssp SS--SHHHHHHHHTTTSCCEEEEEECCCH-HHHHHHHTTEEEEE
T ss_pred CC--HHHHHHHHHhcCCCCceEEEECCCc-hHHHHHHHhcCCCc
Confidence 75 6788889998887 99999999984 66999999999983
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.76 E-value=2.4e-18 Score=143.20 Aligned_cols=127 Identities=20% Similarity=0.299 Sum_probs=102.2
Q ss_pred cceEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 158 VSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
+.++++|+++++++|+.+++++.|+|+++.+..+++++++|||+|+ |++|++++++++..|+ +|+++++++++++.++
T Consensus 2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLS 80 (198)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHH
T ss_pred CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 5688999999999999999999999998877789999999999996 9999999999999999 8999999999999999
Q ss_pred hcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 237 NFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 237 ~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
++|++.+++..+ .++.+.+.+.+.+ ++|++||++|. ..+..++++|+++
T Consensus 81 ~~g~~~~~d~~~--~~~~~~~~~~~~~~~~D~vi~~~g~-~~~~~~~~~l~~~ 130 (198)
T 1pqw_A 81 RLGVEYVGDSRS--VDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG 130 (198)
T ss_dssp TTCCSEEEETTC--STHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE
T ss_pred HcCCCEEeeCCc--HHHHHHHHHHhCCCCCeEEEECCch-HHHHHHHHHhccC
Confidence 999988887765 4566777776655 89999999986 5689999999988
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.02 E-value=9.3e-10 Score=93.80 Aligned_cols=160 Identities=9% Similarity=0.005 Sum_probs=103.0
Q ss_pred CCCCCEEeecC-------CCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc
Q 022865 85 VQPGDHVIPCY-------QAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD 157 (291)
Q Consensus 85 ~~~Gd~V~~~~-------~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 157 (291)
+++||+|++.+ ...|+.|.+|..|..++|+..... + | ... .
T Consensus 4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~~--~------G------------------~~~------~ 51 (248)
T 2yvl_A 4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGKP--E------G------------------VKI------N 51 (248)
T ss_dssp CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTCC--T------T------------------EEE------T
T ss_pred CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCCC--C------C------------------CEE------E
Confidence 89999999987 667888888888888888743220 1 1 111 2
Q ss_pred cceEEcCCCCChhhhhhhcc----cchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 158 VSVAKIDPQAPLDKVCLLGC----GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 158 ~~~~~iP~~~~~~~aa~l~~----~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
..+++.|+.....+.+.... ....+. .+.....+.++++||.+|+| .|..+..+++. +. +|+++|.+++.++
T Consensus 52 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~vldiG~G-~G~~~~~l~~~-~~-~v~~vD~~~~~~~ 127 (248)
T 2yvl_A 52 GFEVYRPTLEEIILLGFERKTQIIYPKDSF-YIALKLNLNKEKRVLEFGTG-SGALLAVLSEV-AG-EVWTFEAVEEFYK 127 (248)
T ss_dssp TEEEECCCHHHHHHHTSCCSSCCCCHHHHH-HHHHHTTCCTTCEEEEECCT-TSHHHHHHHHH-SS-EEEEECSCHHHHH
T ss_pred EEEEeCCCHHHHHHhcCcCCCCcccchhHH-HHHHhcCCCCCCEEEEeCCC-ccHHHHHHHHh-CC-EEEEEecCHHHHH
Confidence 33444443322221111100 011111 24466778899999999998 59999999988 65 9999999999988
Q ss_pred HHHhc----CC-C-EEeCCCCCCchHHHHHHhhc--CCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 234 RAKNF----GV-T-EFVNPKDHDKPIQQVLVDLT--DGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 234 ~~~~~----ga-~-~~i~~~~~~~~~~~~v~~~~--~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
.+++. +. + ..+...+ + .+.. .+++|+|+...+.+ ..++.+.+.|+++
T Consensus 128 ~a~~~~~~~~~~~~~~~~~~d----~----~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g 183 (248)
T 2yvl_A 128 TAQKNLKKFNLGKNVKFFNVD----F----KDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEG 183 (248)
T ss_dssp HHHHHHHHTTCCTTEEEECSC----T----TTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTT
T ss_pred HHHHHHHHcCCCCcEEEEEcC----h----hhcccCCCcccEEEECCcCHHHHHHHHHHHcCCC
Confidence 88753 32 1 1111111 1 1111 23799999988876 7899999999998
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.78 E-value=6.2e-11 Score=109.05 Aligned_cols=162 Identities=17% Similarity=0.116 Sum_probs=116.3
Q ss_pred cccccceeEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceeccc
Q 022865 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFM 144 (291)
Q Consensus 65 ~~~G~e~~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~ 144 (291)
...|++.++.|.++|+.++++.+|+.++.-+-. .++. .+.
T Consensus 75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk------------------------~~~~----------------~~~ 114 (404)
T 1gpj_A 75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVK------------------------KAYD----------------RAA 114 (404)
T ss_dssp EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH------------------------HHHH----------------HHH
T ss_pred eecCchHhhhheeeccCCCCCcCCcchhHHHHH------------------------HHHH----------------HHH
Confidence 467999999999999999999999987421100 0000 011
Q ss_pred CCcceeeeEEecccceEEcCCCCChhhhhhhcccchhhhhhhhhhcC---CCCCCEEEEEcCChHHHHHHHHHHHcCCCe
Q 022865 145 GTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAK---VEPGSIVAVFGLGTVGLAVAEGAKAAGASR 221 (291)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~---~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~ 221 (291)
..|++++|+..+...++.+|+.++.+.++. ..+.+++|.++..... -.++++|+|+|+|.+|.++++.++.+|+.+
T Consensus 115 ~~G~~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~ 193 (404)
T 1gpj_A 115 RLGTLDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRA 193 (404)
T ss_dssp HHTCCCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSE
T ss_pred HcCCchHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCE
Confidence 123677888888888888888887776554 3466777776533221 257899999999999999999999999889
Q ss_pred EEEEcCChhhH-HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHH
Q 022865 222 VIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSV 277 (291)
Q Consensus 222 v~~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~ 277 (291)
|++++++.++. ++++++|++ ++++ .++.+.+ .++|+|++|++....
T Consensus 194 V~v~~r~~~ra~~la~~~g~~-~~~~----~~l~~~l-----~~aDvVi~at~~~~~ 240 (404)
T 1gpj_A 194 VLVANRTYERAVELARDLGGE-AVRF----DELVDHL-----ARSDVVVSATAAPHP 240 (404)
T ss_dssp EEEECSSHHHHHHHHHHHTCE-ECCG----GGHHHHH-----HTCSEEEECCSSSSC
T ss_pred EEEEeCCHHHHHHHHHHcCCc-eecH----HhHHHHh-----cCCCEEEEccCCCCc
Confidence 99999999886 788889875 3332 2333322 269999999986543
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.41 E-value=3.8e-07 Score=82.44 Aligned_cols=86 Identities=17% Similarity=0.173 Sum_probs=65.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE--EeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE--FVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~--~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+++|+|+|+|++|++++++++.+|+ +|+++++++++++.++++++.. +++... .++.+.+. ++|+||+|+
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~--~~~~~~~~-----~~DvVI~~~ 238 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSNS--AEIETAVA-----EADLLIGAV 238 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECCH--HHHHHHHH-----TCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhhCceeEeeeCCH--HHHHHHHc-----CCCEEEECC
Confidence 4899999999999999999999999 9999999999999988776543 232221 23323222 699999999
Q ss_pred CChHH------HHHHHHHhhcc
Q 022865 273 GNVSV------MRAALECCHKV 288 (291)
Q Consensus 273 g~~~~------~~~~~~~l~~~ 288 (291)
+.+.. .+.+++.++++
T Consensus 239 ~~~~~~~~~li~~~~~~~~~~g 260 (361)
T 1pjc_A 239 LVPGRRAPILVPASLVEQMRTG 260 (361)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTT
T ss_pred CcCCCCCCeecCHHHHhhCCCC
Confidence 87552 56677888776
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2e-06 Score=78.14 Aligned_cols=88 Identities=18% Similarity=0.160 Sum_probs=67.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++++|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+++ +|++...++.. ..++.+.+. ++|+|++|+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~~~g~~~~~~~~~-~~~l~~~l~-----~aDvVi~~~ 239 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDAEFCGRIHTRYSS-AYELEGAVK-----RADLVIGAV 239 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSSEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHhcCCeeEeccCC-HHHHHHHHc-----CCCEEEECC
Confidence 57899999999999999999999999 99999999999888876 77753222211 123333332 589999999
Q ss_pred CChHH------HHHHHHHhhcc
Q 022865 273 GNVSV------MRAALECCHKV 288 (291)
Q Consensus 273 g~~~~------~~~~~~~l~~~ 288 (291)
+.+.. .+.+++.++++
T Consensus 240 ~~p~~~t~~li~~~~l~~mk~g 261 (377)
T 2vhw_A 240 LVPGAKAPKLVSNSLVAHMKPG 261 (377)
T ss_dssp CCTTSCCCCCBCHHHHTTSCTT
T ss_pred CcCCCCCcceecHHHHhcCCCC
Confidence 87654 56778888876
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.25 E-value=2.1e-06 Score=78.19 Aligned_cols=93 Identities=20% Similarity=0.283 Sum_probs=67.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCC-------------C----chHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDH-------------D----KPIQQ 255 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~-------------~----~~~~~ 255 (291)
++++|+|+|+|.+|+.++++++.+|+ +|+++++++++++.++++|++.+ ++..+. . ....+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 249 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 249 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEECCC-----------------------CCHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence 68899999999999999999999999 79999999999999988998654 222110 0 00122
Q ss_pred HHHhhcCCCccEEEEcC---CCh--HH-HHHHHHHhhcc
Q 022865 256 VLVDLTDGGVDYSFECI---GNV--SV-MRAALECCHKV 288 (291)
Q Consensus 256 ~v~~~~~gg~d~v~d~~---g~~--~~-~~~~~~~l~~~ 288 (291)
.+.+... ++|+||+|+ |.+ .. ...+++.++++
T Consensus 250 ~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g 287 (384)
T 1l7d_A 250 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPG 287 (384)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTT
T ss_pred HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC
Confidence 2444433 699999999 532 22 36778888876
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.24 E-value=2.3e-06 Score=80.15 Aligned_cols=95 Identities=24% Similarity=0.352 Sum_probs=74.2
Q ss_pred hhhhhhhhhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHH
Q 022865 180 PTGLGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 180 ~ta~~~~~~~~-~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~ 258 (291)
.+.|.++.+.. ...+|++|+|+|.|.+|..+++.++.+|+ +|+++++++++++.++++|++ +++ +.+.+
T Consensus 258 ~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga-~Viv~d~~~~~~~~A~~~Ga~-~~~-------l~e~l- 327 (494)
T 3ce6_A 258 HSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGA-RVSVTEIDPINALQAMMEGFD-VVT-------VEEAI- 327 (494)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECC-------HHHHG-
T ss_pred hhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCE-Eec-------HHHHH-
Confidence 44555543322 26789999999999999999999999999 999999999999889999985 321 21221
Q ss_pred hhcCCCccEEEEcCCChHHHH-HHHHHhhcc
Q 022865 259 DLTDGGVDYSFECIGNVSVMR-AALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~-~~~~~l~~~ 288 (291)
.++|+|++++|+...+. ..++.++++
T Consensus 328 ----~~aDvVi~atgt~~~i~~~~l~~mk~g 354 (494)
T 3ce6_A 328 ----GDADIVVTATGNKDIIMLEHIKAMKDH 354 (494)
T ss_dssp ----GGCSEEEECSSSSCSBCHHHHHHSCTT
T ss_pred ----hCCCEEEECCCCHHHHHHHHHHhcCCC
Confidence 26899999999877666 788888887
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.18 E-value=5.1e-06 Score=75.27 Aligned_cols=88 Identities=22% Similarity=0.262 Sum_probs=64.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++++|+|+|+|.+|+.+++.++.+|+ +|+++++++++++.+++ +|.+...+..+ ..++.+.+. ++|+|++|+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~~~g~~~~~~~~~-~~~l~~~~~-----~~DvVi~~~ 237 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDDVFGGRVITLTAT-EANIKKSVQ-----HADLLIGAV 237 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTTSEEEEECC-HHHHHHHHH-----HCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHhcCceEEEecCC-HHHHHHHHh-----CCCEEEECC
Confidence 45899999999999999999999999 99999999999888765 77753333222 123333332 589999999
Q ss_pred CChHH------HHHHHHHhhcc
Q 022865 273 GNVSV------MRAALECCHKV 288 (291)
Q Consensus 273 g~~~~------~~~~~~~l~~~ 288 (291)
+.+.. .+.+++.++++
T Consensus 238 g~~~~~~~~li~~~~l~~mk~g 259 (369)
T 2eez_A 238 LVPGAKAPKLVTRDMLSLMKEG 259 (369)
T ss_dssp C-------CCSCHHHHTTSCTT
T ss_pred CCCccccchhHHHHHHHhhcCC
Confidence 96542 56777878776
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.6e-05 Score=62.75 Aligned_cols=92 Identities=20% Similarity=0.223 Sum_probs=66.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
...++.+|+|+|+|.+|...++.++..|. +|+++++++++.+.++ +.|... +..+..+ .+.+.+..-.++|+||
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~g~~~-~~~d~~~---~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNEYAFHRLNSEFSGFT-VVGDAAE---FETLKECGMEKADMVF 89 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCTTCCSEE-EESCTTS---HHHHHTTTGGGCSEEE
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHhcCCCcE-EEecCCC---HHHHHHcCcccCCEEE
Confidence 34567899999999999999999999998 9999999999887776 666543 3222111 1233332112799999
Q ss_pred EcCCChHHHHHHHHHhhc
Q 022865 270 ECIGNVSVMRAALECCHK 287 (291)
Q Consensus 270 d~~g~~~~~~~~~~~l~~ 287 (291)
.+++.......+...++.
T Consensus 90 ~~~~~~~~~~~~~~~~~~ 107 (155)
T 2g1u_A 90 AFTNDDSTNFFISMNARY 107 (155)
T ss_dssp ECSSCHHHHHHHHHHHHH
T ss_pred EEeCCcHHHHHHHHHHHH
Confidence 999998776666666665
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.09 E-value=2.5e-05 Score=57.93 Aligned_cols=79 Identities=19% Similarity=0.145 Sum_probs=56.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+.+|+|+|+|.+|...++.+...|..+|+++++++++.+.+.+.+.......-. +. +.+.+... ++|+||++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~-~~---~~~~~~~~-~~d~vi~~~~~ 79 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAK-DE---AGLAKALG-GFDAVISAAPF 79 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTT-CH---HHHHHHTT-TCSEEEECSCG
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCC-CH---HHHHHHHc-CCCEEEECCCc
Confidence 468999999999999999999999338999999999988887666544322111 11 23333332 69999999986
Q ss_pred hHHH
Q 022865 275 VSVM 278 (291)
Q Consensus 275 ~~~~ 278 (291)
....
T Consensus 80 ~~~~ 83 (118)
T 3ic5_A 80 FLTP 83 (118)
T ss_dssp GGHH
T ss_pred hhhH
Confidence 5433
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=1.3e-05 Score=73.35 Aligned_cols=93 Identities=20% Similarity=0.291 Sum_probs=66.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCC---C--------CchH----HHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKD---H--------DKPI----QQVL 257 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~---~--------~~~~----~~~v 257 (291)
++.+|+|+|+|.+|+.++++++.+|+ +|++++++.++++.++++|++.+. +..+ . ..++ .+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l 249 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF 249 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence 57899999999999999999999999 899999999999999999986432 1100 0 0111 1123
Q ss_pred HhhcCCCccEEEEcCCCh-----HHH-HHHHHHhhcc
Q 022865 258 VDLTDGGVDYSFECIGNV-----SVM-RAALECCHKV 288 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~-----~~~-~~~~~~l~~~ 288 (291)
.++.. ++|+||++++.+ ..+ ..+++.|+++
T Consensus 250 ~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g 285 (401)
T 1x13_A 250 AAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAG 285 (401)
T ss_dssp HHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTT
T ss_pred HHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCC
Confidence 33332 599999995332 223 5788888876
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.3e-05 Score=69.28 Aligned_cols=95 Identities=19% Similarity=0.242 Sum_probs=67.0
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CC-CEE-eCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GV-TEF-VNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga-~~~-i~~~~~~~~~~~~v~ 258 (291)
+.....+.++++||-+|+|. |..++.+++.++ ..+|+++|.+++.++.+++. +. +.+ +...+ +.+.
T Consensus 104 i~~~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~~~~-- 176 (277)
T 1o54_A 104 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRD----ISEG-- 176 (277)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCC----GGGC--
T ss_pred HHHHhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECC----HHHc--
Confidence 44566788999999999987 888899999864 34999999999988887653 43 111 11111 1111
Q ss_pred hhcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
+..+.||+|+.....+ ..+..+.+.|+++
T Consensus 177 -~~~~~~D~V~~~~~~~~~~l~~~~~~L~pg 206 (277)
T 1o54_A 177 -FDEKDVDALFLDVPDPWNYIDKCWEALKGG 206 (277)
T ss_dssp -CSCCSEEEEEECCSCGGGTHHHHHHHEEEE
T ss_pred -ccCCccCEEEECCcCHHHHHHHHHHHcCCC
Confidence 2224799998877665 6788889999988
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00012 Score=59.01 Aligned_cols=88 Identities=19% Similarity=0.311 Sum_probs=66.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhhcC-CCccEEEEc
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTD-GGVDYSFEC 271 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~~-gg~d~v~d~ 271 (291)
+++|+|+|.|.+|...++.++.. |+ +|+++++++++.+.+++.|...+. +..+ . +.+.+.++ .++|+||.+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~g~~~~~gd~~~--~---~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSEGRNVISGDATD--P---DFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHTTCCEEECCTTC--H---HHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHCCCCEEEcCCCC--H---HHHHhccCCCCCCEEEEe
Confidence 56799999999999999999998 98 899999999999988888876443 2221 2 23444422 379999999
Q ss_pred CCChHHHHHHHHHhhcc
Q 022865 272 IGNVSVMRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~ 288 (291)
+++......++..++..
T Consensus 113 ~~~~~~~~~~~~~~~~~ 129 (183)
T 3c85_A 113 MPHHQGNQTALEQLQRR 129 (183)
T ss_dssp CSSHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHH
Confidence 99877666666666554
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.84 E-value=3.5e-05 Score=70.13 Aligned_cols=93 Identities=18% Similarity=0.237 Sum_probs=64.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC-------------CC-CCchH----HH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP-------------KD-HDKPI----QQ 255 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~-------------~~-~~~~~----~~ 255 (291)
++.+|+|+|+|.+|+.++++++.+|+ +|+++|.++++++.++++|++.+... .. -...+ .+
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~ 267 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA 267 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence 56899999999999999999999999 99999999999999999988532210 00 00011 12
Q ss_pred HHHhhcCCCccEEEEcCCChH------HHHHHHHHhhcc
Q 022865 256 VLVDLTDGGVDYSFECIGNVS------VMRAALECCHKV 288 (291)
Q Consensus 256 ~v~~~~~gg~d~v~d~~g~~~------~~~~~~~~l~~~ 288 (291)
.+.+... ++|+||.|+..+. .-+..++.++++
T Consensus 268 ~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~G 305 (405)
T 4dio_A 268 LVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPG 305 (405)
T ss_dssp HHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTT
T ss_pred HHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCC
Confidence 3333322 6999999964321 235666666665
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=97.84 E-value=6.7e-05 Score=67.77 Aligned_cols=93 Identities=23% Similarity=0.225 Sum_probs=65.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC-C-----CCC----c----hHHHHHHh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP-K-----DHD----K----PIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~-~-----~~~----~----~~~~~v~~ 259 (291)
++.+|+|+|+|.+|+.++++++.+|+ +|++++++.++++.++++|++.+... + ... . ...+.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e 261 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED 261 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence 67899999999999999999999999 89999999999999999988532110 0 000 0 11223333
Q ss_pred hcCCCccEEEEcCCCh-----H-HHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFECIGNV-----S-VMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~~-----~-~~~~~~~~l~~~ 288 (291)
.. ..+|+||.++..+ . .-+..++.++++
T Consensus 262 ~l-~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpG 295 (381)
T 3p2y_A 262 AI-TKFDIVITTALVPGRPAPRLVTAAAATGMQPG 295 (381)
T ss_dssp HH-TTCSEEEECCCCTTSCCCCCBCHHHHHTSCTT
T ss_pred HH-hcCCEEEECCCCCCcccceeecHHHHhcCCCC
Confidence 33 2699999986432 1 236677777765
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.78 E-value=4.6e-05 Score=66.59 Aligned_cols=93 Identities=15% Similarity=0.112 Sum_probs=67.9
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcCCC
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGG 264 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~gg 264 (291)
..+++++++||.+|+|+.++.++.+++..|+ +|+++|.+++.++.+++. |.+.+-.... +. .++..+.
T Consensus 117 la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~g---Da----~~l~d~~ 188 (298)
T 3fpf_A 117 LGRFRRGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGVDGVNVITG---DE----TVIDGLE 188 (298)
T ss_dssp HTTCCTTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTCCSEEEEES---CG----GGGGGCC
T ss_pred HcCCCCcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEC---ch----hhCCCCC
Confidence 4678999999999999878888888888888 999999999998888754 4422111111 11 1122358
Q ss_pred ccEEEEcCCCh---HHHHHHHHHhhccCC
Q 022865 265 VDYSFECIGNV---SVMRAALECCHKVSG 290 (291)
Q Consensus 265 ~d~v~d~~g~~---~~~~~~~~~l~~~gg 290 (291)
||+|+.....+ ..++.+.+.|+++ |
T Consensus 189 FDvV~~~a~~~d~~~~l~el~r~LkPG-G 216 (298)
T 3fpf_A 189 FDVLMVAALAEPKRRVFRNIHRYVDTE-T 216 (298)
T ss_dssp CSEEEECTTCSCHHHHHHHHHHHCCTT-C
T ss_pred cCEEEECCCccCHHHHHHHHHHHcCCC-c
Confidence 99999765543 6788899999999 5
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0003 Score=54.31 Aligned_cols=80 Identities=15% Similarity=0.168 Sum_probs=60.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.++++|+|.|.+|...++.++..|. .|++++.++++.+.+++.|...+. -+..+. +.+.+..-..+|+|+-++++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~g~~~i~-gd~~~~---~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRERGVRAVL-GNAANE---EIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEEEE-SCTTSH---HHHHHTTGGGCSEEEECCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHcCCCEEE-CCCCCH---HHHHhcCcccCCEEEEECCC
Confidence 4679999999999999999999999 899999999999999888875433 221112 23443322379999999998
Q ss_pred hHHHH
Q 022865 275 VSVMR 279 (291)
Q Consensus 275 ~~~~~ 279 (291)
.....
T Consensus 82 ~~~n~ 86 (140)
T 3fwz_A 82 GYEAG 86 (140)
T ss_dssp HHHHH
T ss_pred hHHHH
Confidence 65443
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00035 Score=53.72 Aligned_cols=87 Identities=18% Similarity=0.203 Sum_probs=62.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
..+++|+|+|.+|...++.+...|. +|++++.++++.+.+++.+... +..+..+. +.+.+..-.++|+||.++++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~~~~~-~~gd~~~~---~~l~~~~~~~~d~vi~~~~~ 80 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDEGFDA-VIADPTDE---SFYRSLDLEGVSAVLITGSD 80 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTTCEE-EECCTTCH---HHHHHSCCTTCSEEEECCSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHCCCcE-EECCCCCH---HHHHhCCcccCCEEEEecCC
Confidence 4579999999999999999999999 8999999999998888777643 32222112 23444422379999999997
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
...-..+...++
T Consensus 81 ~~~n~~~~~~a~ 92 (141)
T 3llv_A 81 DEFNLKILKALR 92 (141)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 654444444443
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=97.71 E-value=1.8e-05 Score=67.88 Aligned_cols=87 Identities=15% Similarity=0.135 Sum_probs=63.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.++.+||.+|+|. |..+..+++.. +. +|+++|.+++.++.+++.+... ++..+.. ++ ....+.||+|+.
T Consensus 84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~--~~-----~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGE-GYYTHAFADALPEI-TTFGLDVSKVAIKAAAKRYPQVTFCVASSH--RL-----PFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTT-STTHHHHHHTCTTS-EEEEEESCHHHHHHHHHHCTTSEEEECCTT--SC-----SBCTTCEEEEEE
T ss_pred CCCCEEEEECCCC-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHhCCCcEEEEcchh--hC-----CCCCCceeEEEE
Confidence 5788999999988 98999999887 56 9999999999999998765432 2222211 10 122347999995
Q ss_pred cCCChHHHHHHHHHhhccC
Q 022865 271 CIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~g 289 (291)
. .....+..+.+.|+++|
T Consensus 155 ~-~~~~~l~~~~~~L~pgG 172 (269)
T 1p91_A 155 I-YAPCKAEELARVVKPGG 172 (269)
T ss_dssp E-SCCCCHHHHHHHEEEEE
T ss_pred e-CChhhHHHHHHhcCCCc
Confidence 4 44567999999999983
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.61 E-value=8.2e-05 Score=57.77 Aligned_cols=87 Identities=11% Similarity=0.076 Sum_probs=60.4
Q ss_pred cchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHH
Q 022865 178 GVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQV 256 (291)
Q Consensus 178 ~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~ 256 (291)
+.+.++.++ +......+++|+|+|+|.+|...++.++..|+ +|+++++++++.+. +++++.+. .... ++.+.
T Consensus 5 ~~sv~~~a~-~~~~~~~~~~v~iiG~G~iG~~~a~~l~~~g~-~v~v~~r~~~~~~~~a~~~~~~~-~~~~----~~~~~ 77 (144)
T 3oj0_A 5 KVSIPSIVY-DIVRKNGGNKILLVGNGMLASEIAPYFSYPQY-KVTVAGRNIDHVRAFAEKYEYEY-VLIN----DIDSL 77 (144)
T ss_dssp CCSHHHHHH-HHHHHHCCCEEEEECCSHHHHHHGGGCCTTTC-EEEEEESCHHHHHHHHHHHTCEE-EECS----CHHHH
T ss_pred cccHHHHHH-HHHHhccCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEcCCHHHHHHHHHHhCCce-Eeec----CHHHH
Confidence 344555554 33333448999999999999999988888898 59999999988654 56777532 2222 23233
Q ss_pred HHhhcCCCccEEEEcCCChH
Q 022865 257 LVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 257 v~~~~~gg~d~v~d~~g~~~ 276 (291)
+. ++|+|+++++...
T Consensus 78 ~~-----~~Divi~at~~~~ 92 (144)
T 3oj0_A 78 IK-----NNDVIITATSSKT 92 (144)
T ss_dssp HH-----TCSEEEECSCCSS
T ss_pred hc-----CCCEEEEeCCCCC
Confidence 32 5899999999753
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00033 Score=53.58 Aligned_cols=76 Identities=22% Similarity=0.372 Sum_probs=54.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+++|+|+|+|.+|...++.+...|+ +|+++++++++.+.+++.+.. .+..+.. + .+.+.+..-+++|+|+.+++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~-~v~~~d~~~~~~~~~~~~~~~-~~~~d~~--~-~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATH-AVIANAT--E-ENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHTTTTTCSE-EEECCTT--C-HHHHHTTTGGGCSEEEECCCS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhCCE-EEEeCCC--C-HHHHHhcCCCCCCEEEECCCC
Confidence 4679999999999999999999998 799999998887766665553 3322211 1 233443312379999999997
Q ss_pred h
Q 022865 275 V 275 (291)
Q Consensus 275 ~ 275 (291)
+
T Consensus 81 ~ 81 (144)
T 2hmt_A 81 N 81 (144)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00017 Score=65.91 Aligned_cols=83 Identities=29% Similarity=0.359 Sum_probs=64.5
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++|+|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|.. +. ++ .++. ..+|+|+.|
T Consensus 217 ~L~GktV~ViG~G~IGk~vA~~Lra~Ga-~Viv~D~dp~ra~~A~~~G~~-v~-------~L----eeal-~~ADIVi~a 282 (435)
T 3gvp_A 217 MFGGKQVVVCGYGEVGKGCCAALKAMGS-IVYVTEIDPICALQACMDGFR-LV-------KL----NEVI-RQVDIVITC 282 (435)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CH----HHHT-TTCSEEEEC
T ss_pred eecCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEEeCChhhhHHHHHcCCE-ec-------cH----HHHH-hcCCEEEEC
Confidence 4578999999999999999999999999 899999998877767666752 11 12 2222 258999999
Q ss_pred CCChHHHH-HHHHHhhcc
Q 022865 272 IGNVSVMR-AALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~-~~~~~l~~~ 288 (291)
.|+...+. ..++.++++
T Consensus 283 tgt~~lI~~e~l~~MK~g 300 (435)
T 3gvp_A 283 TGNKNVVTREHLDRMKNS 300 (435)
T ss_dssp SSCSCSBCHHHHHHSCTT
T ss_pred CCCcccCCHHHHHhcCCC
Confidence 98777665 777888776
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.48 E-value=3.4e-05 Score=68.68 Aligned_cols=97 Identities=20% Similarity=0.176 Sum_probs=62.0
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCC---------------C--EEeCCC
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGV---------------T--EFVNPK 247 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga---------------~--~~i~~~ 247 (291)
+.....+.++++||-+|+|. |..++.+++..|. .+|+++|.+++.++.+++... + .++..+
T Consensus 97 ~l~~l~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d 175 (336)
T 2b25_A 97 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKD 175 (336)
T ss_dssp HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESC
T ss_pred HHHhcCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECC
Confidence 34455788999999999877 8888888988763 499999999998888765211 1 112111
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
. .+. ...+..+.||+|+-....+ ..+..+.+.|+++
T Consensus 176 ~--~~~---~~~~~~~~fD~V~~~~~~~~~~l~~~~~~Lkpg 212 (336)
T 2b25_A 176 I--SGA---TEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHG 212 (336)
T ss_dssp T--TCC---C-------EEEEEECSSSTTTTHHHHGGGEEEE
T ss_pred h--HHc---ccccCCCCeeEEEECCCCHHHHHHHHHHhcCCC
Confidence 1 111 1112223699888655543 4578888899988
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00043 Score=60.42 Aligned_cols=85 Identities=26% Similarity=0.276 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-++++|+|+|.|.+|..+++.++.+|+ +|++++++.++.+.+.++|+.. +.. .++ .++. ..+|+|+.++
T Consensus 153 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~-~~~----~~l----~~~l-~~aDvVi~~~ 221 (293)
T 3d4o_A 153 IHGANVAVLGLGRVGMSVARKFAALGA-KVKVGARESDLLARIAEMGMEP-FHI----SKA----AQEL-RDVDVCINTI 221 (293)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTSEE-EEG----GGH----HHHT-TTCSEEEECC
T ss_pred CCCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHCCCee-cCh----hhH----HHHh-cCCCEEEECC
Confidence 368899999999999999999999999 9999999998877777788642 221 122 2222 2589999998
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
+....-...++.++++
T Consensus 222 p~~~i~~~~l~~mk~~ 237 (293)
T 3d4o_A 222 PALVVTANVLAEMPSH 237 (293)
T ss_dssp SSCCBCHHHHHHSCTT
T ss_pred ChHHhCHHHHHhcCCC
Confidence 7533224456666665
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0011 Score=56.19 Aligned_cols=95 Identities=21% Similarity=0.246 Sum_probs=67.3
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCE--EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE--FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~--~i~~~~~~~~~~~~v~ 258 (291)
+.....+.++++||-+|+|. |..+..+++.++ ..+|+++|.+++..+.+++. |.+. .+...+ +. .
T Consensus 85 i~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d----~~---~ 156 (255)
T 3mb5_A 85 IVAYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKD----IY---E 156 (255)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSC----GG---G
T ss_pred HHHhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECc----hh---h
Confidence 44566788999999999887 888899999853 44999999999988887653 4332 111111 11 1
Q ss_pred hhcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
.+..+.+|+|+...+.+ ..+..+.+.|+++
T Consensus 157 ~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g 187 (255)
T 3mb5_A 157 GIEEENVDHVILDLPQPERVVEHAAKALKPG 187 (255)
T ss_dssp CCCCCSEEEEEECSSCGGGGHHHHHHHEEEE
T ss_pred ccCCCCcCEEEECCCCHHHHHHHHHHHcCCC
Confidence 12223799999877764 4789999999998
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00061 Score=62.50 Aligned_cols=83 Identities=25% Similarity=0.327 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++++|+|.|.+|..+++.++.+|+ +|++++.++.+...+...|.. +. ++.+.+. .+|+|+.+
T Consensus 244 ~L~GKTVgVIG~G~IGr~vA~~lrafGa-~Viv~d~dp~~a~~A~~~G~~-vv-------~LeElL~-----~ADIVv~a 309 (464)
T 3n58_A 244 MMAGKVAVVCGYGDVGKGSAQSLAGAGA-RVKVTEVDPICALQAAMDGFE-VV-------TLDDAAS-----TADIVVTT 309 (464)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTCE-EC-------CHHHHGG-----GCSEEEEC
T ss_pred cccCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCcchhhHHHhcCce-ec-------cHHHHHh-----hCCEEEEC
Confidence 4578999999999999999999999999 999999888776666666653 21 1222221 58999999
Q ss_pred CCChHHH-HHHHHHhhcc
Q 022865 272 IGNVSVM-RAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~-~~~~~~l~~~ 288 (291)
+|+...+ ...+..|+++
T Consensus 310 tgt~~lI~~e~l~~MK~G 327 (464)
T 3n58_A 310 TGNKDVITIDHMRKMKDM 327 (464)
T ss_dssp CSSSSSBCHHHHHHSCTT
T ss_pred CCCccccCHHHHhcCCCC
Confidence 9976654 5677777765
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00076 Score=57.93 Aligned_cols=95 Identities=22% Similarity=0.239 Sum_probs=66.2
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc-----C--CCE--EeCCCCCCchHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF-----G--VTE--FVNPKDHDKPIQQ 255 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~-----g--a~~--~i~~~~~~~~~~~ 255 (291)
+.....+.++++||-+|+| .|..+..+++..+ ..+|+++|.+++..+.+++. | .+. ++..+. .+
T Consensus 91 i~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~--~~--- 164 (280)
T 1i9g_A 91 IVHEGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL--AD--- 164 (280)
T ss_dssp HHHHTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG--GG---
T ss_pred HHHHcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch--Hh---
Confidence 4456678899999999988 6888889998764 34999999999988887653 4 221 222111 01
Q ss_pred HHHhhcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 256 VLVDLTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 256 ~v~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
. .+..+.+|+|+.....+ ..+..+.+.|+++
T Consensus 165 ~--~~~~~~~D~v~~~~~~~~~~l~~~~~~L~pg 196 (280)
T 1i9g_A 165 S--ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG 196 (280)
T ss_dssp C--CCCTTCEEEEEEESSCGGGGHHHHHHHEEEE
T ss_pred c--CCCCCceeEEEECCcCHHHHHHHHHHhCCCC
Confidence 0 11134799888776655 6788889999988
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00062 Score=59.60 Aligned_cols=85 Identities=24% Similarity=0.301 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-++++|+|+|.|.+|..+++.++.+|+ +|++.+++.++.+.+.++|+. .+.. .+ +.++. ..+|+|+.++
T Consensus 155 l~g~~v~IiG~G~iG~~~a~~l~~~G~-~V~~~d~~~~~~~~~~~~g~~-~~~~----~~----l~~~l-~~aDvVi~~~ 223 (300)
T 2rir_A 155 IHGSQVAVLGLGRTGMTIARTFAALGA-NVKVGARSSAHLARITEMGLV-PFHT----DE----LKEHV-KDIDICINTI 223 (300)
T ss_dssp STTSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCE-EEEG----GG----HHHHS-TTCSEEEECC
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHCCCe-EEch----hh----HHHHh-hCCCEEEECC
Confidence 367899999999999999999999999 999999999887777677763 2221 12 22222 2589999998
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
+....-...++.++++
T Consensus 224 p~~~i~~~~~~~mk~g 239 (300)
T 2rir_A 224 PSMILNQTVLSSMTPK 239 (300)
T ss_dssp SSCCBCHHHHTTSCTT
T ss_pred ChhhhCHHHHHhCCCC
Confidence 8633223445555554
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00034 Score=59.37 Aligned_cols=79 Identities=20% Similarity=0.289 Sum_probs=54.1
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-EeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
+-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++....-.+.. ..|..+ .+++.+.+.++ +++|+++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~--g~iDiLV 83 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAPRHPRIRREELDITD-SQRLQRLFEAL--PRLDVLV 83 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSCCCTTEEEEECCTTC-HHHHHHHHHHC--SCCSEEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhhhcCCeEEEEecCCC-HHHHHHHHHhc--CCCCEEE
Confidence 347999999987 9999999999999999 9999999888765332211111 122222 23344444332 5799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|-
T Consensus 84 NNAGi 88 (242)
T 4b79_A 84 NNAGI 88 (242)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99884
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0011 Score=56.53 Aligned_cols=78 Identities=18% Similarity=0.080 Sum_probs=54.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCC-CCchHHHHHHhhc--CCCccEEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKD-HDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
++|||.|+ +++|.+.++.+...|+ +|+.+++++++++.+.+.+.... +..+- +..+..+.+.+.. -|++|++++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 68999987 9999999999989999 99999999998877765544332 22211 1233333333322 247999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
++|.
T Consensus 82 NAG~ 85 (247)
T 3ged_A 82 NACR 85 (247)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9873
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00085 Score=57.99 Aligned_cols=80 Identities=23% Similarity=0.311 Sum_probs=56.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-e--CCCCCCchHHHHHHhhc--CCCc
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
-+|+++||.|+ +++|.+.++.+...|+ +|+.+++++++++.+ +++|.... + |..+ ..+..+.+.+.. -|++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEIGGGAVGIQADSAN-LAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCE
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCC
Confidence 36889999987 9999999999999999 999999999887655 46665432 2 2222 233333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++++++|.
T Consensus 105 DiLVNNAG~ 113 (273)
T 4fgs_A 105 DVLFVNAGG 113 (273)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999884
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0074 Score=45.60 Aligned_cols=77 Identities=22% Similarity=0.315 Sum_probs=53.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|+|+|+|.+|...++.+...|. +|+++++++++.+.+. +++... +..+..+. +.+.+..-.++|+||.+++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~~~~~~~~~~~~~~~-~~~d~~~~---~~l~~~~~~~~d~vi~~~~~ 79 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDALV-INGDCTKI---KTLEDAGIEDADMYIAVTGK 79 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSEE-EESCTTSH---HHHHHTTTTTCSEEEECCSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHhcCcEE-EEcCCCCH---HHHHHcCcccCCEEEEeeCC
Confidence 578999999999999988888898 8999999988877665 356532 22111111 22333212379999999998
Q ss_pred hHH
Q 022865 275 VSV 277 (291)
Q Consensus 275 ~~~ 277 (291)
...
T Consensus 80 ~~~ 82 (140)
T 1lss_A 80 EEV 82 (140)
T ss_dssp HHH
T ss_pred chH
Confidence 654
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0015 Score=55.77 Aligned_cols=78 Identities=15% Similarity=0.282 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+|+++||.|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++.|.+.. + |..+ .++..+.+.+.. -|
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSK-KKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 5789999987 9999999988888999 899999999876544 34454432 2 2222 233333333322 24
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|+++++.|
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7999999988
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0038 Score=52.26 Aligned_cols=78 Identities=23% Similarity=0.209 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCc-hHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDK-PIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~-~~~~~v~~~~~gg~d~v~d 270 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++++.+. ++....++..+-.+. ++.+.+.+ .+++|++|+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~ 82 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGS--VGPVDLLVN 82 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--CCCCCEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHH--cCCCCEEEE
Confidence 4689999988 9999999998888999 8999999888766543 342223332222122 22222221 237999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 83 ~Ag~ 86 (244)
T 3d3w_A 83 NAAV 86 (244)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9883
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.15 E-value=0.002 Score=54.42 Aligned_cols=79 Identities=20% Similarity=0.270 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+. +++...+ .|..+ ..++.+.+.+.. .+++|++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVAD-PASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTC-HHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCEEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999988 9999999988888999 8999999988766543 4453222 22222 233333333322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 82 vn~Ag~ 87 (245)
T 1uls_A 82 VHYAGI 87 (245)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.002 Score=54.41 Aligned_cols=80 Identities=23% Similarity=0.301 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeC-CCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVN-PKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~-~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ .+++...... .+- +..++.+.+.+.. .+++|+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 83 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 4689999987 9999999999889999 899999998876654 3555443222 111 1223333333322 237999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++++.|.
T Consensus 84 lv~nAg~ 90 (247)
T 3rwb_A 84 LVNNASI 90 (247)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999883
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0017 Score=55.49 Aligned_cols=80 Identities=29% Similarity=0.276 Sum_probs=55.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeC-CCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVN-PKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~-~~~-~~~~~~~~v~~~~--~gg 264 (291)
+|+++||.|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++.|.+.... .+- +..+..+.+.+.. .|+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 86 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIH 86 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 5789999987 9999999999999999 999999998876544 3345433221 111 2233444444433 248
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 87 iDiLVNNAG~ 96 (255)
T 4g81_D 87 VDILINNAGI 96 (255)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999999884
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0006 Score=63.37 Aligned_cols=82 Identities=28% Similarity=0.330 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-.|++++|+|+|++|..+++.++..|+ +|++++.++.+.+.+...+++ +.+. .+. -..+|+++++.
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA-~Viv~D~~~~~a~~Aa~~g~d-v~~l-----------ee~-~~~aDvVi~at 328 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGA-RVIVTEIDPICALQATMEGLQ-VLTL-----------EDV-VSEADIFVTTT 328 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-ECCG-----------GGT-TTTCSEEEECS
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHhCCc-cCCH-----------HHH-HHhcCEEEeCC
Confidence 478999999999999999999999999 999999999888777777653 2111 111 12589999988
Q ss_pred CChHHHHH-HHHHhhcc
Q 022865 273 GNVSVMRA-ALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~-~~~~l~~~ 288 (291)
|+...+.. .++.++++
T Consensus 329 G~~~vl~~e~l~~mk~g 345 (488)
T 3ond_A 329 GNKDIIMLDHMKKMKNN 345 (488)
T ss_dssp SCSCSBCHHHHTTSCTT
T ss_pred CChhhhhHHHHHhcCCC
Confidence 87654433 55555544
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.002 Score=51.98 Aligned_cols=92 Identities=16% Similarity=0.187 Sum_probs=61.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC---------CeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhh
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA---------SRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~---------~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~ 260 (291)
.++++++||-+|+|+ |..+..+++..+. .+|+++|.++... +..-..+ ..+-........+.+.
T Consensus 19 ~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~-----~~~~~~~~~~d~~~~~~~~~~~~~ 92 (196)
T 2nyu_A 19 ILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP-----LEGATFLCPADVTDPRTSQRILEV 92 (196)
T ss_dssp CCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC-----CTTCEEECSCCTTSHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc-----CCCCeEEEeccCCCHHHHHHHHHh
Confidence 367899999999988 9999999999874 4899999988531 1111233 2222123334444444
Q ss_pred cCC-CccEEEE-----cCCCh------------HHHHHHHHHhhcc
Q 022865 261 TDG-GVDYSFE-----CIGNV------------SVMRAALECCHKV 288 (291)
Q Consensus 261 ~~g-g~d~v~d-----~~g~~------------~~~~~~~~~l~~~ 288 (291)
..+ .||+|+. +++.. ..+..+.+.|+++
T Consensus 93 ~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 138 (196)
T 2nyu_A 93 LPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPG 138 (196)
T ss_dssp SGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred cCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 444 8999994 44432 5577788889988
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0045 Score=52.58 Aligned_cols=87 Identities=25% Similarity=0.367 Sum_probs=55.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh-------------------hhHHHHH----hcCCC-EEeCCC-CC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP-------------------KKFDRAK----NFGVT-EFVNPK-DH 249 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~-------------------~~~~~~~----~~ga~-~~i~~~-~~ 249 (291)
+.+|+|+|+|++|..+++.+...|..+++.+|.+. .|.+.+. ++... .+.... .-
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 110 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL 110 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence 46899999999999999999999998999999887 5654442 23222 221111 11
Q ss_pred CchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHh
Q 022865 250 DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 250 ~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l 285 (291)
... .+.++. .++|+||+++++..+-....+..
T Consensus 111 ~~~---~~~~~~-~~~DvVi~~~d~~~~~~~l~~~~ 142 (249)
T 1jw9_B 111 DDA---ELAALI-AEHDLVLDCTDNVAVRNQLNAGC 142 (249)
T ss_dssp CHH---HHHHHH-HTSSEEEECCSSHHHHHHHHHHH
T ss_pred CHh---HHHHHH-hCCCEEEEeCCCHHHHHHHHHHH
Confidence 111 122222 25999999999876544443333
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.002 Score=53.80 Aligned_cols=74 Identities=16% Similarity=0.186 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+.+|||+|+ |.+|...+..+...|+ +|+++++++++.+.+.+.+...++..+-. +.+.+.. +++|+||+++
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-----~~~~~~~-~~~D~vi~~a 92 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRERGASDIVVANLE-----EDFSHAF-ASIDAVVFAA 92 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHTTCSEEEECCTT-----SCCGGGG-TTCSEEEECC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHhCCCceEEEcccH-----HHHHHHH-cCCCEEEECC
Confidence 4678999998 9999999998888998 99999999998887776665233322211 2233333 2799999999
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 93 g~ 94 (236)
T 3e8x_A 93 GS 94 (236)
T ss_dssp CC
T ss_pred CC
Confidence 84
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.07 E-value=0.0025 Score=54.17 Aligned_cols=78 Identities=22% Similarity=0.328 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCC-EEe--CCCCCCchHHHHHHhhcCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVT-EFV--NPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~-----ga~-~~i--~~~~~~~~~~~~v~~~~~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++ +.. ..+ |..+ ..++.+.+.+....
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIRE-PGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCC-HHHHHHHHHHHHHh
Confidence 4678999988 9999999988888899 8999999887665432 22 212 222 2222 23333444433322
Q ss_pred -CccEEEEcCC
Q 022865 264 -GVDYSFECIG 273 (291)
Q Consensus 264 -g~d~v~d~~g 273 (291)
++|++|++.|
T Consensus 84 ~gid~lv~~Ag 94 (260)
T 2z1n_A 84 GGADILVYSTG 94 (260)
T ss_dssp TCCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 4999999988
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0016 Score=54.59 Aligned_cols=78 Identities=14% Similarity=0.222 Sum_probs=52.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCccE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d~ 267 (291)
++++||+|+ +++|...+..+...|+ +|+.+++++++++.+. +++... .+ |..+ ..++.+.+.+.. .+++|+
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id~ 80 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGNAVIGIVADLAH-HEDVDVAFAAAVEWGGLPEL 80 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTS-HHHHHHHHHHHHHHHCSCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCceEEECCCCC-HHHHHHHHHHHHHhcCCCcE
Confidence 578999987 9999999888888999 8999999998776554 333221 22 2222 233333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 81 lvnnAg~ 87 (235)
T 3l6e_A 81 VLHCAGT 87 (235)
T ss_dssp EEEECCC
T ss_pred EEECCCC
Confidence 9999884
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0027 Score=54.07 Aligned_cols=78 Identities=22% Similarity=0.216 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC-EEe--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ |.+|...+..+...|+ +|+++++++++++.+. ++... ..+ |..+ ..++.+.+.+.. .+++|
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGGFAVEVDVTK-RASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCTTCCEEEECCTTC-HHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4688999988 9999999988888999 8999999988766543 33221 222 2222 233333333322 23799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 89 ~lv~~Ag 95 (263)
T 3ak4_A 89 LLCANAG 95 (263)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999988
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0026 Score=53.90 Aligned_cols=81 Identities=19% Similarity=0.183 Sum_probs=52.8
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c----C-CCEEe--CCC-CCCchHHHHHHhhc-
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----G-VTEFV--NPK-DHDKPIQQVLVDLT- 261 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~----g-a~~~i--~~~-~~~~~~~~~v~~~~- 261 (291)
-.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ + + ....+ |.. .+..+..+.+.+..
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 35789999987 9999999988888999 89999999887655432 1 2 11222 221 11223333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 2479999999884
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0023 Score=55.38 Aligned_cols=78 Identities=18% Similarity=0.145 Sum_probs=54.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~~gg~d~v~ 269 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +++... .+..+- +..++.+.+.+. +++|++|
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv 91 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLI 91 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEE
Confidence 5789999987 9999999988888999 8999999998877664 343322 222221 122333334333 5799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
+++|.
T Consensus 92 ~nAg~ 96 (291)
T 3rd5_A 92 NNAGI 96 (291)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 99884
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0028 Score=56.67 Aligned_cols=91 Identities=29% Similarity=0.281 Sum_probs=64.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC-----C-C-------CchH-HHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-----D-H-------DKPI-QQVLV 258 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~-----~-~-------~~~~-~~~v~ 258 (291)
-+|++|.|.|.|.+|+.+++.++.+|+ +|++.|.+.++.+++++++++.+ ... . + ...+ .+.+.
T Consensus 173 L~GktV~I~G~GnVG~~~A~~l~~~Ga-kVvvsD~~~~~~~~a~~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~~ 250 (355)
T 1c1d_A 173 LDGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVAR 250 (355)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHHH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHhcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHHh
Confidence 478999999999999999999999999 89999988877667777776432 110 0 0 0011 11122
Q ss_pred hhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+ +.++|+|..+.+.+.+.+.+.|..+
T Consensus 251 ~l---k~~iVie~AN~p~t~~eA~~~L~~~ 277 (355)
T 1c1d_A 251 TL---DCSVVAGAANNVIADEAASDILHAR 277 (355)
T ss_dssp HC---CCSEECCSCTTCBCSHHHHHHHHHT
T ss_pred hC---CCCEEEECCCCCCCCHHHHHHHHhC
Confidence 22 5789999988776555677888776
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0013 Score=56.22 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCCEEe-CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFV-NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++. +.+++.+...+. |..+ ..++.+.+.+.. .+++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGH-RVIISYRTEHASVTELRQAGAVALYGDFSC-ETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESSCCHHHHHHHHHTCEEEECCTTS-HHHHHHHHHHHHHHCSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHhcCCeEEECCCCC-HHHHHHHHHHHHHhcCCCCEE
Confidence 4578999987 9999999988888899 888888887653 444555643222 2222 233333333322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 104 v~nAg~ 109 (260)
T 3gem_A 104 VHNASE 109 (260)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999883
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0026 Score=53.94 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c-----C-C-CEEe--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F-----G-V-TEFV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~-----g-a-~~~i--~~~~~~~~~~~~v~~~~- 261 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ + + . -..+ |..+ ..++.+.+.+..
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITD-CTKADTEIKDIHQ 83 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCC-HHHHHHHHHHHHH
Confidence 4678999988 9999998888888899 89999999887655432 1 2 1 1222 2222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 84 ~~g~iD~lvnnAg~ 97 (250)
T 3nyw_A 84 KYGAVDILVNAAAM 97 (250)
T ss_dssp HHCCEEEEEECCCC
T ss_pred hcCCCCEEEECCCc
Confidence 2479999999984
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.001 Score=57.01 Aligned_cols=78 Identities=13% Similarity=0.138 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.++++||+|+ |++|...++.+...|+ +|+.++++.++++.+..-.. ..+ |..+ ..++.+.+.+.. .+++|++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGH-PLLLLARRVERLKALNLPNT-LCAQVDVTD-KYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHTTCCTTE-EEEECCTTC-HHHHHHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHhhcCCc-eEEEecCCC-HHHHHHHHHHHHHHCCCCCEE
Confidence 4678999988 9999999988888999 89999998887654322111 122 2222 233333333322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 92 vnnAg~ 97 (266)
T 3p19_A 92 VNNAGM 97 (266)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999884
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0025 Score=54.88 Aligned_cols=80 Identities=20% Similarity=0.223 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +.+... .+..+- +..++.+.+.+.. .++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999987 9999999988888999 8999999887755442 233222 222221 1233333343322 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 110 iD~lvnnAg~ 119 (276)
T 3r1i_A 110 IDIAVCNAGI 119 (276)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.003 Score=52.94 Aligned_cols=75 Identities=20% Similarity=0.232 Sum_probs=50.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
++++||+|+ |++|...++.+...|+ +|+.+++++++ ..++++...+ .|..+ .+..+.+.+.. .+++|++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~g~id~lv~ 76 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGY-RVAIASRNPEE--AAQSLGAVPLPTDLEK--DDPKGLVKRALEALGGLHVLVH 76 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHH--HHHHHTCEEEECCTTT--SCHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHH--HHHhhCcEEEecCCch--HHHHHHHHHHHHHcCCCCEEEE
Confidence 568999988 9999999988888999 89999888776 3344553222 22222 33333333322 147999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 77 ~Ag~ 80 (239)
T 2ekp_A 77 AAAV 80 (239)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9873
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0056 Score=56.04 Aligned_cols=87 Identities=17% Similarity=0.300 Sum_probs=64.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
..+|+|+|.|.+|..+++.++..|. .|++++.++++.+.+++.|...++- +. .-.+.+.+..-..+|+|+-++++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~g~~vi~G-Da---t~~~~L~~agi~~A~~viv~~~~ 78 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKFGMKVFYG-DA---TRMDLLESAGAAKAEVLINAIDD 78 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHTTCCCEES-CT---TCHHHHHHTTTTTCSEEEECCSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhCCCeEEEc-CC---CCHHHHHhcCCCccCEEEECCCC
Confidence 4579999999999999999999999 8999999999999999888754332 21 11233444422379999999998
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
...-..+...++
T Consensus 79 ~~~n~~i~~~ar 90 (413)
T 3l9w_A 79 PQTNLQLTEMVK 90 (413)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 765544444444
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0029 Score=54.88 Aligned_cols=43 Identities=26% Similarity=0.264 Sum_probs=37.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
-.+++++|+|+|++|.+++..+...|+++|++++++.++.+.+
T Consensus 125 l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~l 167 (283)
T 3jyo_A 125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQAL 167 (283)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
Confidence 3578999999999999999999899997899999998886643
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0027 Score=53.48 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=53.9
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeC-CCCCC-chHHHHHHhhcCCCccE
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVN-PKDHD-KPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~-~~~~~-~~~~~~v~~~~~gg~d~ 267 (291)
..+++++||+|+ |++|...+..+...|+ +|+.+++++++++.+. ++.....+. .+-.+ ..+.+.+.+. +++|+
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~ 87 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDI 87 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCE
Confidence 356789999987 9999999888888898 8999999988876654 444332221 22111 2233333332 47999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 88 li~~Ag~ 94 (249)
T 3f9i_A 88 LVCNAGI 94 (249)
T ss_dssp EEECCC-
T ss_pred EEECCCC
Confidence 9999884
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0021 Score=54.69 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++ +... .+ |..+ ..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRN-TDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988888999 8999999988776554 22 3222 22 2222 233333333322 24
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|++.|
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999998
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0033 Score=53.30 Aligned_cols=79 Identities=23% Similarity=0.231 Sum_probs=53.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC-CCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD-HDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++.+..+++.. ..+..+- +..++.+.+.+.. .+++|++|
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhHHHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4678999988 9999999988888999 89999888877444455542 3332222 1233333333322 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 83 ~~Ag~ 87 (256)
T 2d1y_A 83 NNAAI 87 (256)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99883
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0033 Score=53.54 Aligned_cols=79 Identities=13% Similarity=0.244 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE--Ee--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~--~i--~~~~~~~~~~~~v~~~~- 261 (291)
+|+++||+|+ | ++|++.++.+...|+ +|+.+++++++++.+. +++... .+ |..+ .++..+.+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQS-DEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCC-HHHHHHHHHHHHH
Confidence 5789999996 4 899999988889999 9999999987765543 334322 22 2222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
-|++|+++++.|.
T Consensus 83 ~~G~iD~lvnnAg~ 96 (256)
T 4fs3_A 83 DVGNIDGVYHSIAF 96 (256)
T ss_dssp HHCCCSEEEECCCC
T ss_pred HhCCCCEEEecccc
Confidence 2479999999873
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0041 Score=54.76 Aligned_cols=78 Identities=21% Similarity=0.202 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCC--C-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV--T-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga--~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |++|...+..+...|+ +|++++++.++++.+.+ .+. . ..+ |..+ ..++.+.+.+..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVAS-REGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCC-HHHHHHHHHHHHHh
Confidence 4679999988 9999998888888999 89999999887655432 232 1 122 2222 233444444322
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+++|++|++.|
T Consensus 85 ~g~id~lv~nAg 96 (319)
T 3ioy_A 85 FGPVSILCNNAG 96 (319)
T ss_dssp TCCEEEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 247999999998
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=96.93 E-value=0.003 Score=53.58 Aligned_cols=79 Identities=25% Similarity=0.269 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4678999988 9999999998888999 899999998876554 3444322 22 2222 233333443322 23799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 82 ~lv~nAg~ 89 (254)
T 1hdc_A 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999883
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0029 Score=55.17 Aligned_cols=79 Identities=27% Similarity=0.328 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...+..+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRH-LDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHhCC
Confidence 5789999988 9999999988888999 8999999988765543 224332 22 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999883
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0031 Score=53.47 Aligned_cols=80 Identities=20% Similarity=0.260 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +++... .+..+- +..++.+.+.+.. .+++|+
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 86 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDI 86 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999988 9999999988888999 8999999998876553 455433 222221 1233333333322 237999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 87 li~~Ag~ 93 (261)
T 3n74_A 87 LVNNAGI 93 (261)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999873
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0033 Score=53.09 Aligned_cols=79 Identities=19% Similarity=0.233 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH-HHHhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD-RAKNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~-~~~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ |++|...+..+...|+ +|+.+++++ ++++ .+++.+... .+ |..+ ..++.+.+.+.. .+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 83 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC 83 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCchhHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHcCCC
Confidence 4678999987 9999999988888999 899998887 6554 334455432 22 2222 223333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 84 d~lv~nAg~ 92 (249)
T 2ew8_A 84 DILVNNAGI 92 (249)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0032 Score=53.69 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc-----CCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF-----GVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~-----ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++ +... .+ |..+ .+++.+.+.+..
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCC-HHHHHHHHHHHHHH
Confidence 4688999987 9999999988888899 8999999987765432 22 3322 22 2222 233333343322
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+++|++|++.|
T Consensus 90 ~g~id~lv~nAg 101 (267)
T 1iy8_A 90 FGRIDGFFNNAG 101 (267)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 247999999987
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0091 Score=49.83 Aligned_cols=77 Identities=19% Similarity=0.151 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCc-hHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDK-PIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~-~~~~~v~~~~~gg~d~v~d 270 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+.+ +.....+..+-.+. ++.+.+.+ .+++|++|+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~ 82 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGG--IGPVDLLVN 82 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTT--CCCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHH--cCCCCEEEE
Confidence 4678999988 9999999998888999 89999998877655433 32223332221112 22222221 236999999
Q ss_pred cCC
Q 022865 271 CIG 273 (291)
Q Consensus 271 ~~g 273 (291)
+.|
T Consensus 83 ~Ag 85 (244)
T 1cyd_A 83 NAA 85 (244)
T ss_dssp CCC
T ss_pred CCc
Confidence 988
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0032 Score=54.24 Aligned_cols=79 Identities=25% Similarity=0.269 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-e--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ .+++.... + |..+ ..++.+.+.+.. .+++|
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIGSKAFGVRVDVSS-AKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999987 9999999988888999 899999998876554 34554332 2 2222 233333333322 23799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999883
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0034 Score=53.37 Aligned_cols=79 Identities=24% Similarity=0.412 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +... .+ |..+ ..++.+.+.+.. .
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVAT-PEGVDAVVESVRSSF 83 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999987 9999999988888999 8999999887765432 22 4332 22 2222 233333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 84 g~id~lv~~Ag~ 95 (263)
T 3ai3_A 84 GGADILVNNAGT 95 (263)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999883
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0035 Score=52.75 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+.++.--..+..+-.+.+..+.+.+.. +++|++|++.
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~-~~id~lv~~A 82 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA 82 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHh-CCCCEEEECC
Confidence 4678999988 9999999988888999 89999998877654433321122222211222222222222 4799999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 83 g~ 84 (246)
T 2ag5_A 83 GF 84 (246)
T ss_dssp CC
T ss_pred cc
Confidence 83
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0029 Score=55.32 Aligned_cols=73 Identities=11% Similarity=0.042 Sum_probs=52.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCC--EEeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
++++++|+|+|++|.+++..+...|+.+|++++++.++.+ ++++++.. .++. + +.+.+.. ..+|+||+
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~-------~-~~~~~~~-~~aDivIn 210 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS-------L-AEAETRL-AEYDIIIN 210 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC-------H-HHHHHTG-GGCSEEEE
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee-------H-HHHHhhh-ccCCEEEE
Confidence 5789999999999999999998999879999999988864 44566542 1211 1 1222222 25899999
Q ss_pred cCCCh
Q 022865 271 CIGNV 275 (291)
Q Consensus 271 ~~g~~ 275 (291)
|++..
T Consensus 211 ~t~~~ 215 (297)
T 2egg_A 211 TTSVG 215 (297)
T ss_dssp CSCTT
T ss_pred CCCCC
Confidence 88753
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0044 Score=53.10 Aligned_cols=79 Identities=20% Similarity=0.255 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHH---hhcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLV---DLTD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~---~~~~ 262 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+. +.+... .+ |..+ ..++.+.+. +..+
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999988888999 8999999987765432 234332 22 2222 223333333 2222
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 579999999884
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0029 Score=53.75 Aligned_cols=80 Identities=20% Similarity=0.197 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +++... .+..+- +..++.+.+.+.. .+++|+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL 85 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 5789999987 9999999988888999 8999999988776554 444332 222221 1223333333221 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++++.|.
T Consensus 86 lv~nAg~ 92 (255)
T 4eso_A 86 LHINAGV 92 (255)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0036 Score=53.57 Aligned_cols=79 Identities=20% Similarity=0.344 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hh----cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KN----FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~----~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+ ++ .+... .+ |..+ ..++.+.+.+.. .
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999988 9999999988888999 899999988765543 22 24432 22 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|+++|.
T Consensus 98 g~iD~lvnnAg~ 109 (267)
T 1vl8_A 98 GKLDTVVNAAGI 109 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999883
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0036 Score=53.19 Aligned_cols=79 Identities=24% Similarity=0.294 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ |++|...++.+...|+ +|+.++++.++++.+ .+++... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~id 84 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPAAYAVQMDVTR-QDSIDAAIAATVEHAGGLD 84 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHSSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCCceEEEeeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999987 9999999988888999 899999998876554 3454432 22 2222 223333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 85 ~lv~~Ag~ 92 (259)
T 4e6p_A 85 ILVNNAAL 92 (259)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999884
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0035 Score=53.76 Aligned_cols=80 Identities=19% Similarity=0.258 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCC-CCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKD-HDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~-~~~~~~~~v~~~~--~gg~d~v 268 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++..-..+..+- +..++.+.+.+.. .+++|++
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 86 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999987 9999999988888999 8999999988766553 333222222221 1233333333322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 87 v~nAg~ 92 (270)
T 1yde_A 87 VNNAGH 92 (270)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999873
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0039 Score=52.93 Aligned_cols=78 Identities=17% Similarity=0.206 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHh---hcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVD---LTD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~---~~~ 262 (291)
.++++||+|+ |.+|...++.+...|+ +|+++++++++++.+. +.+... .+ |..+ ..++.+.+.+ ..+
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999988888999 8999999887765432 224322 22 2222 2233333332 222
Q ss_pred CCccEEEEcCC
Q 022865 263 GGVDYSFECIG 273 (291)
Q Consensus 263 gg~d~v~d~~g 273 (291)
+++|++|++.|
T Consensus 86 g~id~lv~~Ag 96 (260)
T 2ae2_A 86 GKLNILVNNAG 96 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57999999988
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0034 Score=53.74 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH---HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA---KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~---~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+|+++||.|+ +++|.+.++.+...|+ +|+.+++++++.+.+ .+.+... .+ |..+ ..+..+.+.+.. -|+
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDALAQRQPRATYLPVELQD-DAQCRDAVAQTIATFGR 83 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHHHHhcCCCEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 5789999987 9999999888888999 899988887665443 2334322 22 2222 233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 84 iDiLVNnAGi 93 (258)
T 4gkb_A 84 LDGLVNNAGV 93 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999984
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0039 Score=52.62 Aligned_cols=79 Identities=20% Similarity=0.261 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. + .+... .+ |..+ ..++.+.+.+.. .+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVAD-RQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988888899 8999999887765442 2 24322 22 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~id~lv~nAg~ 94 (247)
T 2jah_A 84 GLDILVNNAGI 94 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0032 Score=54.04 Aligned_cols=78 Identities=19% Similarity=0.220 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC-EEe--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EFV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~-~~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|...+..+...|+ +|+.+++++++++.+. +.+.. ..+ |..+ ..++.+.+.+.. .+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVND-ATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCC-HHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988888999 9999999987765442 23332 222 2222 233333333322 23
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|++.|
T Consensus 105 ~iD~lvnnAg 114 (270)
T 3ftp_A 105 ALNVLVNNAG 114 (270)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999988
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0034 Score=53.62 Aligned_cols=79 Identities=24% Similarity=0.316 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. + .+... .+ |..+ ..++.+.+.+.. .
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAE-PDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTS-TTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4688999987 9999999988889999 8999999988765442 1 34332 22 3322 234434443322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 97 g~id~lv~nAg~ 108 (266)
T 4egf_A 97 GGLDVLVNNAGI 108 (266)
T ss_dssp TSCSEEEEECCC
T ss_pred CCCCEEEECCCc
Confidence 479999999883
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=96.85 E-value=0.0029 Score=54.21 Aligned_cols=80 Identities=25% Similarity=0.255 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-eCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-VNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++.... +..+- +..++.+.+.+.. .+++|+
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 104 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGA-IVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI 104 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 4688999987 9999999998889999 899999998876554 45554432 22221 1223333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 105 lvnnAg~ 111 (266)
T 3grp_A 105 LVNNAGI 111 (266)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999984
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0038 Score=53.22 Aligned_cols=80 Identities=16% Similarity=0.240 Sum_probs=53.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
-.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..++.+.+.+.. .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITD-DAQVAHLVDETMKAY 86 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHT
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 35789999987 9999999988888999 8999999988765543 234332 22 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 87 g~id~lv~nAg~ 98 (264)
T 3ucx_A 87 GRVDVVINNAFR 98 (264)
T ss_dssp SCCSEEEECCCS
T ss_pred CCCcEEEECCCC
Confidence 479999999864
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.003 Score=54.37 Aligned_cols=79 Identities=20% Similarity=0.237 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--CE-EeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--TE-FVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga--~~-~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+ +++.. .. .+..+- +.+++.+.+.+.. .+++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARL 106 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999988 9999999988888999 899999988776543 23321 11 222211 1123333333322 2479
Q ss_pred cEEEEcCC
Q 022865 266 DYSFECIG 273 (291)
Q Consensus 266 d~v~d~~g 273 (291)
|++|++.|
T Consensus 107 D~lvnnAg 114 (276)
T 2b4q_A 107 DILVNNAG 114 (276)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0011 Score=60.65 Aligned_cols=81 Identities=22% Similarity=0.314 Sum_probs=56.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-.|++|+|+|.|.+|...++.++.+|+ +|++++.++.+...+...|... . ++ .++.. .+|+|+.+.
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga-~Viv~D~~p~~a~~A~~~G~~~-~-------sL----~eal~-~ADVVilt~ 274 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGA-RVVVTEVDPINALQAAMEGYQV-L-------LV----EDVVE-EAHIFVTTT 274 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE-C-------CH----HHHTT-TCSEEEECS
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCChhhhHHHHHhCCee-c-------CH----HHHHh-hCCEEEECC
Confidence 468999999999999999999999999 8999999988877776666531 1 12 12211 477777777
Q ss_pred CChHHHH-HHHHHhhc
Q 022865 273 GNVSVMR-AALECCHK 287 (291)
Q Consensus 273 g~~~~~~-~~~~~l~~ 287 (291)
++...+. ..++.|++
T Consensus 275 gt~~iI~~e~l~~MK~ 290 (436)
T 3h9u_A 275 GNDDIITSEHFPRMRD 290 (436)
T ss_dssp SCSCSBCTTTGGGCCT
T ss_pred CCcCccCHHHHhhcCC
Confidence 6544332 33334443
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.0039 Score=51.87 Aligned_cols=78 Identities=17% Similarity=0.119 Sum_probs=51.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCC-CCchHHHHHHhhc--CCCccEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKD-HDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~-~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
++++||+|+ |.+|...++.+...|+ +|+++++++++++.+. ++..-..+..+- +..++.+.+.+.. .+++|++|
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGY-RVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV 83 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 568999987 9999999988888999 8999999888766543 343222322221 1233333333322 13799999
Q ss_pred EcCC
Q 022865 270 ECIG 273 (291)
Q Consensus 270 d~~g 273 (291)
++.|
T Consensus 84 ~~Ag 87 (234)
T 2ehd_A 84 NNAG 87 (234)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9988
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0025 Score=54.82 Aligned_cols=79 Identities=18% Similarity=0.219 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CC---C-EEe--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GV---T-EFV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga---~-~~i--~~~~~~~~~~~~v~~~~- 261 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++ +. . ..+ |..+ ..++.+.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 82 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK 82 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCC-HHHHHHHHHHHHH
Confidence 4678999987 9999999988888899 8999999988765442 22 32 1 122 2222 223333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 83 ~~g~iD~lv~nAg~ 96 (280)
T 1xkq_A 83 QFGKIDVLVNNAGA 96 (280)
T ss_dssp HHSCCCEEEECCCC
T ss_pred hcCCCCEEEECCCC
Confidence 2479999999873
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.004 Score=53.35 Aligned_cols=79 Identities=18% Similarity=0.246 Sum_probs=53.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 87 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASVGRGAVHHVVDLTN-EVSVRALIDFTIDTFGRLD 87 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHHCTTCEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhCCCeEEEECCCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4689999987 9999999988888999 899999988876554 3454332 22 2222 233333333322 23799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 88 ~lv~nAg~ 95 (271)
T 3tzq_B 88 IVDNNAAH 95 (271)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0032 Score=53.68 Aligned_cols=79 Identities=22% Similarity=0.175 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcC-CC-EEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFG-VT-EFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~g-a~-~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +.+ .. ..+..+- +..++.+.+.+.. .+
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4688999987 9999999988888999 8999999988765442 233 11 1222221 1223333333322 23
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|+++++.|
T Consensus 88 ~id~lvnnAg 97 (262)
T 3pk0_A 88 GIDVVCANAG 97 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999988
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0028 Score=53.46 Aligned_cols=97 Identities=18% Similarity=0.140 Sum_probs=67.3
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc-----CCCEEeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF-----GVTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~-----ga~~~i~~~~~~~~~~~~v~~ 259 (291)
+.....+.++++||-+|+|. |..+..+++.++ ..+|+++|.+++.++.+++. |.+.+..... ++.+. .
T Consensus 88 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~---d~~~~--~ 161 (258)
T 2pwy_A 88 MVTLLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLG---KLEEA--E 161 (258)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEES---CGGGC--C
T ss_pred HHHHcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEEC---chhhc--C
Confidence 44556788999999999986 888999999864 34999999999988888654 5322111111 11000 1
Q ss_pred hcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
+..+.+|+|+...+.+ ..+..+.+.|+++
T Consensus 162 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~~g 191 (258)
T 2pwy_A 162 LEEAAYDGVALDLMEPWKVLEKAALALKPD 191 (258)
T ss_dssp CCTTCEEEEEEESSCGGGGHHHHHHHEEEE
T ss_pred CCCCCcCEEEECCcCHHHHHHHHHHhCCCC
Confidence 2224799998877765 7788899999988
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0034 Score=54.01 Aligned_cols=79 Identities=24% Similarity=0.381 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCC---CE-Ee--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGV---TE-FV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga---~~-~i--~~~~~~~~~~~~v~~~~- 261 (291)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++++++.+ ++.+. .. .+ |..+ ..++.+.+.+..
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 87 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITN-EDETARAVDAVTA 87 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCC-HHHHHHHHHHHHH
Confidence 4689999987 9999999988888999 899999998776543 22332 11 22 2222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 2479999999884
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0037 Score=53.38 Aligned_cols=79 Identities=19% Similarity=0.267 Sum_probs=53.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. +++... .+ |..+ .+++.+.+.+.. .+++|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD 82 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVSD-PKAVEAVFAEALEEFGRLH 82 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCC-HHHHHHHHHHHHHHcCCCc
Confidence 4678999988 9999999988888999 8999999988766553 443222 22 2222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 83 ~lvnnAg~ 90 (263)
T 2a4k_A 83 GVAHFAGV 90 (263)
T ss_dssp EEEEGGGG
T ss_pred EEEECCCC
Confidence 99999873
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0034 Score=54.12 Aligned_cols=79 Identities=29% Similarity=0.387 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 105 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKIGCGAAACRVDVSD-EQQIIAMVDACVAAFGGVD 105 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHCSSCEEEECCTTC-HHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCcceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4678999987 9999999988888899 999999998876655 3454322 22 2222 223333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 106 ~lvnnAg~ 113 (277)
T 3gvc_A 106 KLVANAGV 113 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0043 Score=53.62 Aligned_cols=80 Identities=18% Similarity=0.254 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.++++.++++.+. ++ +... .+..+- +..++.+.+.+.. .++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999987 9999999988888999 9999999988765543 32 3222 222221 1233333343322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 106 iD~lVnnAg~ 115 (283)
T 3v8b_A 106 LDIVVANAGI 115 (283)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0029 Score=53.47 Aligned_cols=79 Identities=29% Similarity=0.364 Sum_probs=53.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC-EE--eCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EF--VNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~-~~--i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +++.. .. .|..+ ..++.+.+.+.. .+++|
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 85 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGDNGKGMALNVTN-PESIEAVLKAITDEFGGVD 85 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHCCCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceEEEEeCCC-HHHHHHHHHHHHHHcCCCC
Confidence 5688999987 9999999988889999 8999999988766553 33322 12 23222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 86 ~lv~nAg~ 93 (248)
T 3op4_A 86 ILVNNAGI 93 (248)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999883
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0056 Score=53.29 Aligned_cols=35 Identities=31% Similarity=0.436 Sum_probs=31.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
..+|+|+|+|++|..+++.+.++|..+++.+|.+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 46899999999999999999999999999998765
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0089 Score=50.44 Aligned_cols=74 Identities=22% Similarity=0.144 Sum_probs=51.3
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+++++||+|+ |++|...++.+...|+ +|++++++++.. ++++....+ .+- ..+..+.+.+.. ++|++|++
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~---~~~~~~~~~-~D~-~~~~~~~~~~~~--~iD~lv~~ 88 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELL---KRSGHRYVV-CDL-RKDLDLLFEKVK--EVDILVLN 88 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHH---HHTCSEEEE-CCT-TTCHHHHHHHSC--CCSEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHH---HhhCCeEEE-eeH-HHHHHHHHHHhc--CCCEEEEC
Confidence 45789999988 9999999988888999 899998887543 344422232 221 234444444432 79999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 89 Ag~ 91 (249)
T 1o5i_A 89 AGG 91 (249)
T ss_dssp CCC
T ss_pred CCC
Confidence 883
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0045 Score=52.69 Aligned_cols=79 Identities=18% Similarity=0.181 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC-EEe--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT-EFV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~-~~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+. ++... ..+ |..+ ..++.+.+.+.. .+++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~iD 83 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhcCceEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4678999987 9999999988888899 8999999988765543 33321 122 2222 233333333322 13799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 84 ~lv~~Ag~ 91 (260)
T 1nff_A 84 VLVNNAGI 91 (260)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999883
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0039 Score=53.78 Aligned_cols=80 Identities=19% Similarity=0.193 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEE-eCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-VNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~-i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++.... +..+- +..++.+.+.+.. .+++|+
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4689999987 9999999988888999 9999999988876554 4443332 22211 1223333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++++.|.
T Consensus 83 lvnnAg~ 89 (281)
T 3zv4_A 83 LIPNAGI 89 (281)
T ss_dssp EECCCCC
T ss_pred EEECCCc
Confidence 9999884
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0046 Score=51.89 Aligned_cols=80 Identities=18% Similarity=0.233 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--CEEe--CCCCCC-chHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TEFV--NPKDHD-KPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga--~~~i--~~~~~~-~~~~~~v~~~~-- 261 (291)
+++++||+|+ |++|...+..+...|+ +|+.+++++++++.+. +.+. ..++ +.+..+ .++.+.+.+..
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 5789999987 9999999988888999 8999999988765543 2231 1222 221111 23333333222
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 92 ~g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 FGRLDGLLHNASI 104 (247)
T ss_dssp HSCCSEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2379999999884
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0086 Score=49.84 Aligned_cols=78 Identities=15% Similarity=0.196 Sum_probs=51.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-----hcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-----NFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-----~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |++|...++.+...|+ +|+.++++.++++.+. +.+.... + |..+ ..++.+.+.+.. .+
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSK-AESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCC-HHHHHHHHHHHHHhcC
Confidence 578999987 9999999998889999 8999999988765442 3343332 2 2222 122322222221 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999883
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0045 Score=53.18 Aligned_cols=79 Identities=19% Similarity=0.253 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHhC
Confidence 4678999987 9999999988888999 899999998776443 2224332 22 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 99 ~iD~lv~~Ag~ 109 (277)
T 2rhc_B 99 PVDVLVNNAGR 109 (277)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0047 Score=52.57 Aligned_cols=79 Identities=22% Similarity=0.400 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. + .+... .+ |..+ ..++.+.+.+.. .+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence 4678999987 9999999998888999 8999999887765432 2 24322 22 2222 233333333322 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0045 Score=51.98 Aligned_cols=80 Identities=18% Similarity=0.240 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++.+.+. +.+... .+..+- +..++.+.+.+.. .++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678999987 9999998888888899 8999999987765443 234332 222221 1233444444332 347
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 83 id~li~~Ag~ 92 (247)
T 3lyl_A 83 IDILVNNAGI 92 (247)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0031 Score=53.44 Aligned_cols=79 Identities=16% Similarity=0.202 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhcC-CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLTD-GG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~~-gg 264 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..++.+.+.+... ++
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARN-EDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCC-HHHHHHHHHHHHhhCC
Confidence 4688999987 9999999988888999 8999999988765443 224322 22 2222 2233333332111 58
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 84 id~lv~nAg~ 93 (252)
T 3h7a_A 84 LEVTIFNVGA 93 (252)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEECCCc
Confidence 9999999884
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0062 Score=49.88 Aligned_cols=92 Identities=18% Similarity=0.201 Sum_probs=63.7
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC---EEeCCCCCCchHHHHHHh
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~---~~i~~~~~~~~~~~~v~~ 259 (291)
.....+.++++||-+|+|. |..++.+++. +. +|+++|.+++.++.+++ +|.+ .++..+. .+ .+..
T Consensus 48 l~~l~~~~~~~vLDlGcG~-G~~~~~la~~-~~-~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~--~~---~~~~ 119 (204)
T 3njr_A 48 LAALAPRRGELLWDIGGGS-GSVSVEWCLA-GG-RAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA--PA---ALAD 119 (204)
T ss_dssp HHHHCCCTTCEEEEETCTT-CHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT--TG---GGTT
T ss_pred HHhcCCCCCCEEEEecCCC-CHHHHHHHHc-CC-EEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch--hh---hccc
Confidence 3455678899999999986 8888888887 66 99999999998887764 3543 1222211 11 1111
Q ss_pred hcCCCccEEEEcCCC-hHHHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFECIGN-VSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~-~~~~~~~~~~l~~~ 288 (291)
...||+|+...+. ...++.+.+.|+++
T Consensus 120 --~~~~D~v~~~~~~~~~~l~~~~~~Lkpg 147 (204)
T 3njr_A 120 --LPLPEAVFIGGGGSQALYDRLWEWLAPG 147 (204)
T ss_dssp --SCCCSEEEECSCCCHHHHHHHHHHSCTT
T ss_pred --CCCCCEEEECCcccHHHHHHHHHhcCCC
Confidence 1369998876443 23788888999998
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0038 Score=53.65 Aligned_cols=79 Identities=24% Similarity=0.257 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ +++|...+..+...|+ +|+.+++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGY-GVALAGRRLDALQETAAEIGDDALCVPTDVTD-PDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTSCCEEEECCTTS-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 4678999987 9999999988888999 899999998876555 3454322 22 2222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 105 ~lVnnAg~ 112 (272)
T 4dyv_A 105 VLFNNAGT 112 (272)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0043 Score=53.25 Aligned_cols=78 Identities=21% Similarity=0.329 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC-CE--Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV-TE--FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga-~~--~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+++++||+|+ |.+|...++.+...|+ +|++++++.++++.+. +.+. .. .+ |..+ ..++.+.+.+..
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCC-HHHHHHHHHHHHHh
Confidence 4678999987 9999999988888999 8999999887665432 2332 11 22 2222 223333333322
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.+++|++|+++|
T Consensus 109 ~g~iD~vi~~Ag 120 (279)
T 1xg5_A 109 HSGVDICINNAG 120 (279)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 137999999988
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0039 Score=53.80 Aligned_cols=79 Identities=20% Similarity=0.221 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCEE-eCCCCC-CchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTEF-VNPKDH-DKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~~-i~~~~~-~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++ +.... +..+-. ..++.+.+.+.. .++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 85 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGG 85 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4688999987 9999999988888999 8999999988765553 33 33222 211111 123333333322 137
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++|++.|
T Consensus 86 iD~lvnnAg 94 (280)
T 3tox_A 86 LDTAFNNAG 94 (280)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0033 Score=53.85 Aligned_cols=79 Identities=16% Similarity=0.236 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+.... + |..+ ..++.+.+.+.. .+
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTD-RHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHcC
Confidence 3678999987 9999999988888999 8999999988765543 2343322 2 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 81 ~iD~lVnnAG~ 91 (264)
T 3tfo_A 81 RIDVLVNNAGV 91 (264)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0036 Score=53.13 Aligned_cols=80 Identities=18% Similarity=0.192 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +.+... .+..+- +..++.+.+.+.. .++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 89 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK 89 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5689999987 9999998888888899 8999999987765443 234332 222221 1223333333322 137
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 90 id~lv~nAg~ 99 (256)
T 3gaf_A 90 ITVLVNNAGG 99 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0049 Score=52.73 Aligned_cols=80 Identities=16% Similarity=0.177 Sum_probs=52.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ |.+|...+..+...|+ +|+++++++++.+.+. +.+... .+..+- +..++.+.+.+.. .++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 108 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD 108 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCC
Confidence 4678999988 9999999988888999 8999999887665432 234332 222221 1233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|+++|.
T Consensus 109 iD~li~~Ag~ 118 (272)
T 1yb1_A 109 VSILVNNAGV 118 (272)
T ss_dssp CSEEEECCCC
T ss_pred CcEEEECCCc
Confidence 9999999883
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0045 Score=53.30 Aligned_cols=79 Identities=22% Similarity=0.229 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+. +.+.... + |..+ ..++.+.+.+.. .+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS-TDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999888888899 8999999988765442 2343322 2 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 101 ~id~lv~nAg~ 111 (279)
T 3sju_A 101 PIGILVNSAGR 111 (279)
T ss_dssp SCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 79999999884
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.004 Score=52.74 Aligned_cols=80 Identities=26% Similarity=0.357 Sum_probs=53.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++++.+ ++++... .+..+- +..++.+.+.+.. .+++|+
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 4678999988 9999999988888999 899998887765543 4455432 222221 1233333333322 137999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 90 li~~Ag~ 96 (265)
T 2o23_A 90 AVNCAGI 96 (265)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999873
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.005 Score=52.57 Aligned_cols=80 Identities=23% Similarity=0.338 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC--C-EEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV--T-EFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga--~-~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++++. . ..+..+- +..++.+.+.+.. .+++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 93 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL 93 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999988 9999999988888899 899998888765433 34432 1 2222221 1233333333321 1479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 94 d~li~~Ag~ 102 (278)
T 2bgk_A 94 DIMFGNVGV 102 (278)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCcc
Confidence 999999873
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0052 Score=52.38 Aligned_cols=79 Identities=20% Similarity=0.151 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCC-E-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVT-E-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~-~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. + .+.. . .+ |..+ ..+..+.+.+..
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLD-ALQVRAFAEACERT 84 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTC-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCC-HHHHHHHHHHHHHH
Confidence 4688999987 9999999988888999 8999999988765442 2 3332 1 22 2222 223333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 85 ~g~id~lvnnAg~ 97 (265)
T 3lf2_A 85 LGCASILVNNAGQ 97 (265)
T ss_dssp HCSCSEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2479999999884
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0041 Score=52.26 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCC---CEEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGV---TEFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga---~~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++++.. +++.. -..+..+- +..++.+.+.+.. .+++
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999988 9999999988888999 899999988766544 23321 12222221 1223333333322 1369
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 84 d~li~~Ag~ 92 (251)
T 1zk4_A 84 STLVNNAGI 92 (251)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999873
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0037 Score=53.03 Aligned_cols=80 Identities=24% Similarity=0.360 Sum_probs=47.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+ ++++... .+..+- +..++.+.+.+.. .+++|+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 84 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGA-TVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHG 84 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4688999987 9999999988888999 899998888765544 3443322 222221 1233333333322 237999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 85 lv~nAg~ 91 (257)
T 3tpc_A 85 LVNCAGT 91 (257)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0044 Score=52.28 Aligned_cols=80 Identities=24% Similarity=0.248 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++++.+.+ .+... .+..+- +..++.+.+.+.. .++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999988 9999999988888999 89999999887655432 23322 222221 1223333333322 137
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 87 id~li~~Ag~ 96 (253)
T 3qiv_A 87 IDYLVNNAAI 96 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999875
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0078 Score=51.15 Aligned_cols=79 Identities=18% Similarity=0.289 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC--CEEe--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV--TEFV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~--vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga--~~~i--~~~~~~~~~~~~v~~~~- 261 (291)
.++++||+|+ |. +|...++.+...|+ +|+.++++++..+.+. +++. -..+ |..+ ..++.+.+.+..
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTN-DAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSS-SHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCC-HHHHHHHHHHHHH
Confidence 4689999987 65 99998888888899 8999888875544443 3332 1222 2222 334444444332
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 84 ~~g~id~li~~Ag~ 97 (266)
T 3oig_A 84 QVGVIHGIAHCIAF 97 (266)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCeeEEEEcccc
Confidence 2379999999874
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0065 Score=53.50 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=35.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---PKKFDR 234 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~---~~~~~~ 234 (291)
.++++||+|+|++|.+++..+...|+++|+++.++ .++.+.
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~ 196 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEK 196 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHH
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHH
Confidence 57899999999999999999999999889999898 665543
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0036 Score=53.00 Aligned_cols=80 Identities=23% Similarity=0.253 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+ ++++... .+..+- +..++.+.+.+.. .+++|+
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4678999987 9999999988888899 899999998876544 3444332 222221 1223333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 84 lv~~Ag~ 90 (253)
T 1hxh_A 84 LVNNAGI 90 (253)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0032 Score=54.79 Aligned_cols=78 Identities=19% Similarity=0.249 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCC---C-EEe--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGV---T-EFV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga---~-~~i--~~~~~~~~~~~~v~~~~- 261 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+. +.+. . ..+ |..+ ..++.+.+.+..
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA 102 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCC-HHHHHHHHHHHHH
Confidence 4678999987 9999999988888999 8999999987765432 2232 2 122 2222 223333333322
Q ss_pred -CCCccEEEEcCC
Q 022865 262 -DGGVDYSFECIG 273 (291)
Q Consensus 262 -~gg~d~v~d~~g 273 (291)
.+++|++|++.|
T Consensus 103 ~~g~iD~lvnnAG 115 (297)
T 1xhl_A 103 KFGKIDILVNNAG 115 (297)
T ss_dssp HHSCCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 247999999988
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0035 Score=53.35 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=52.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |++|...+..+...|+ +|+.++++.++++.+. +.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSH-SDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCC-HHHHHHHHHHHHHhcC
Confidence 4678999987 9999999888888899 8999999988765442 234322 22 2222 233333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|++|+++|.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999885
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0037 Score=54.36 Aligned_cols=80 Identities=19% Similarity=0.165 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE--EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE--FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~--~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++ +... .+..+- +..++.+.+.+.. .+
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 5688999987 9999999988889999 8999999987765442 33 2111 222221 1223333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.70 E-value=0.005 Score=53.28 Aligned_cols=79 Identities=16% Similarity=0.116 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCC-CE-Ee--CCCCCC-chHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGV-TE-FV--NPKDHD-KPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga-~~-~i--~~~~~~-~~~~~~v~~~~-- 261 (291)
.++++||+|+ +++|...+..+...|+ +|+++++++++.+.+. + .+. .. .+ |..+ . ..+...+....
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTD-PIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTS-CHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCC-cHHHHHHHHHHHHHh
Confidence 5678999988 9999998888888899 9999999988754432 2 222 11 22 3322 2 22333333222
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|+++|.
T Consensus 89 ~g~iD~lv~nAg~ 101 (311)
T 3o26_A 89 FGKLDILVNNAGV 101 (311)
T ss_dssp HSSCCEEEECCCC
T ss_pred CCCCCEEEECCcc
Confidence 2479999999985
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0045 Score=52.56 Aligned_cols=80 Identities=18% Similarity=0.331 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHH-hc----CCCE-EeCCCC-CCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAK-NF----GVTE-FVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~-~~----ga~~-~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++++ ++.+. ++ +... .+..+- +..++.+.+.+.. .
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4678999987 9999999988888999 89999888776 44332 22 4332 222221 1223333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 82 g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 82 GRIDILVNNAGI 93 (260)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999873
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0044 Score=53.30 Aligned_cols=74 Identities=16% Similarity=0.104 Sum_probs=51.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++++++|+|+|++|.++++.+...|+ +|++++++.++.+ ++++++....++..+ ..+ +.+ +.+|+|++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~-~V~v~~R~~~~~~~la~~~~~~~~~~~~~-~~~----~~~---~~~DivVn~t 188 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELAKLFAHTGSIQALS-MDE----LEG---HEFDLIINAT 188 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHHTGGGSSEEECC-SGG----GTT---CCCSEEEECC
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHhhccCCeeEec-HHH----hcc---CCCCEEEECC
Confidence 57899999999999999999999996 9999999988864 445554310011111 011 111 4689999998
Q ss_pred CChH
Q 022865 273 GNVS 276 (291)
Q Consensus 273 g~~~ 276 (291)
|...
T Consensus 189 ~~~~ 192 (271)
T 1nyt_A 189 SSGI 192 (271)
T ss_dssp SCGG
T ss_pred CCCC
Confidence 8643
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0075 Score=51.01 Aligned_cols=80 Identities=18% Similarity=0.212 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---C-------C-CEEeCCCC-CCchHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---G-------V-TEFVNPKD-HDKPIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---g-------a-~~~i~~~~-~~~~~~~~v~~ 259 (291)
+++++||+|+ |.+|...+..+...|+ +|+++++++++++.+. ++ + . -..+..+- +..++.+.+.+
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQ 84 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHH
Confidence 4678999988 9999999988888898 8999999988765543 22 1 1 12222221 12233333333
Q ss_pred hc--CCCc-cEEEEcCCC
Q 022865 260 LT--DGGV-DYSFECIGN 274 (291)
Q Consensus 260 ~~--~gg~-d~v~d~~g~ 274 (291)
.. .+++ |++|++.|.
T Consensus 85 ~~~~~g~i~d~vi~~Ag~ 102 (264)
T 2pd6_A 85 VQACFSRPPSVVVSCAGI 102 (264)
T ss_dssp HHHHHSSCCSEEEECCCC
T ss_pred HHHHhCCCCeEEEECCCc
Confidence 22 1356 999999883
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0045 Score=52.50 Aligned_cols=79 Identities=19% Similarity=0.238 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGK-AEDRERLVAMAVNLHG 90 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCC-HHHHHHHHHHHHHHcC
Confidence 4688999987 9999999988888999 899999988765433 2234322 12 2222 223333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 91 ~iD~lv~~Ag~ 101 (260)
T 2zat_A 91 GVDILVSNAAV 101 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0061 Score=51.43 Aligned_cols=79 Identities=28% Similarity=0.363 Sum_probs=51.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ |.+|...++.+...|+ +|+++++++++.+.+ ++.+... .+..+- +..++.+.+.+.. .++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4688999987 9999999988888899 899999988765433 2234322 222221 1233333333322 137
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++|+++|
T Consensus 91 id~vi~~Ag 99 (260)
T 3awd_A 91 VDILVACAG 99 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0074 Score=54.15 Aligned_cols=83 Identities=17% Similarity=0.249 Sum_probs=56.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
+|+|+|+|.+|..+++.+.. .. .|.+.+.+.++++.++++.....+|..+ . +.+.++.. ++|+|+++++...
T Consensus 18 kilvlGaG~vG~~~~~~L~~-~~-~v~~~~~~~~~~~~~~~~~~~~~~d~~d--~---~~l~~~~~-~~DvVi~~~p~~~ 89 (365)
T 3abi_A 18 KVLILGAGNIGRAIAWDLKD-EF-DVYIGDVNNENLEKVKEFATPLKVDASN--F---DKLVEVMK-EFELVIGALPGFL 89 (365)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHTTTSEEEECCTTC--H---HHHHHHHT-TCSEEEECCCGGG
T ss_pred EEEEECCCHHHHHHHHHHhc-CC-CeEEEEcCHHHHHHHhccCCcEEEecCC--H---HHHHHHHh-CCCEEEEecCCcc
Confidence 69999999999988877743 34 8889999999988887654332334332 2 23344332 5899999999765
Q ss_pred HHHHHHHHhhc
Q 022865 277 VMRAALECCHK 287 (291)
Q Consensus 277 ~~~~~~~~l~~ 287 (291)
....+..|++.
T Consensus 90 ~~~v~~~~~~~ 100 (365)
T 3abi_A 90 GFKSIKAAIKS 100 (365)
T ss_dssp HHHHHHHHHHH
T ss_pred cchHHHHHHhc
Confidence 55555555543
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0051 Score=52.74 Aligned_cols=80 Identities=26% Similarity=0.296 Sum_probs=53.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEe-CCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFV-NPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i-~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. +.+....+ ..+- +..++.+.+.+.. .++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID 103 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence 4688999987 9999999988888999 8999999888765442 33443322 2111 1223333333322 347
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 104 iD~lv~nAg~ 113 (271)
T 4ibo_A 104 VDILVNNAGI 113 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0064 Score=52.39 Aligned_cols=46 Identities=17% Similarity=0.081 Sum_probs=38.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~g 239 (291)
.+++++|+|+|+.|.+++..+...|+.+|+++.++.++.+.+ ++++
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~ 165 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD 165 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc
Confidence 578999999999999999988899987999999998876544 4554
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.0033 Score=53.41 Aligned_cols=75 Identities=27% Similarity=0.249 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhcCCCEEe---CCCCCCchHHHHHHhhc-CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVTEFV---NPKDHDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~~~~~ga~~~i---~~~~~~~~~~~~v~~~~-~gg~d 266 (291)
+|+++||.|+ +++|.+.++.+...|+ +|+.++++. +..+.+++.|.+... |..+ ... +++.. .+++|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d-~~~----v~~~~~~g~iD 81 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAPDETLDIIAKDGGNASALLIDFAD-PLA----AKDSFTDAGFD 81 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTS-TTT----TTTSSTTTCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCC-HHH----HHHHHHhCCCC
Confidence 5789999987 9999999999999999 898888874 345566667654422 2222 111 22222 35899
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 82 iLVNNAGi 89 (247)
T 4hp8_A 82 ILVNNAGI 89 (247)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0031 Score=54.45 Aligned_cols=79 Identities=23% Similarity=0.292 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCC-EEe--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVT-EFV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~-~~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++ +.. ..+ |..+ .+++.+.+.+.. .
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGD-PDQVAALFAAVRAEF 109 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5788999987 9999999988888999 8999999988765443 22 211 222 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 110 g~iD~lvnnAG~ 121 (281)
T 4dry_A 110 ARLDLLVNNAGS 121 (281)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0057 Score=51.67 Aligned_cols=78 Identities=19% Similarity=0.261 Sum_probs=52.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhcC--CCccEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLTD--GGVDYSF 269 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~~--gg~d~v~ 269 (291)
+++||+|+ |++|...++.+...|+ +|+.+++++++++.+. +++... .+..+- +..++.+.+.+... +++|++|
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv 79 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGH-KVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV 79 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 36888887 9999999988888999 8999999988765543 444322 222221 12344444444332 3799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 80 nnAg~ 84 (248)
T 3asu_A 80 NNAGL 84 (248)
T ss_dssp ECCCC
T ss_pred ECCCc
Confidence 99873
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0048 Score=51.64 Aligned_cols=79 Identities=24% Similarity=0.338 Sum_probs=52.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-----~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++++.+.+ .+... .+ |..+ ..++.+.+.+.. .
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLS-EESINKAFEEIYNLV 83 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCC-HHHHHHHHHHHHHhc
Confidence 4678999988 9999999988888898 89999998876654322 34332 22 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 84 ~~~d~vi~~Ag~ 95 (248)
T 2pnf_A 84 DGIDILVNNAGI 95 (248)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999883
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.01 Score=48.20 Aligned_cols=95 Identities=13% Similarity=0.127 Sum_probs=65.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~~ 259 (291)
+.....++++++||-+|+|. |..++.+++.....+|+++|.+++.++.+++ .+.+. ++..+. .+ .+..
T Consensus 32 ~l~~l~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~--~~---~~~~ 105 (204)
T 3e05_A 32 TLSKLRLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA--PE---GLDD 105 (204)
T ss_dssp HHHHTTCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT--TT---TCTT
T ss_pred HHHHcCCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh--hh---hhhc
Confidence 34556778899999999985 8889999988654599999999998888764 34322 222111 00 0111
Q ss_pred hcCCCccEEEEcCC---ChHHHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFECIG---NVSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~~g---~~~~~~~~~~~l~~~ 288 (291)
.+.+|+|+.... -...++.+.+.|+++
T Consensus 106 --~~~~D~i~~~~~~~~~~~~l~~~~~~Lkpg 135 (204)
T 3e05_A 106 --LPDPDRVFIGGSGGMLEEIIDAVDRRLKSE 135 (204)
T ss_dssp --SCCCSEEEESCCTTCHHHHHHHHHHHCCTT
T ss_pred --CCCCCEEEECCCCcCHHHHHHHHHHhcCCC
Confidence 136999998754 356688888899998
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0075 Score=51.76 Aligned_cols=80 Identities=23% Similarity=0.189 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc---CCCE-EeCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF---GVTE-FVNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~---ga~~-~i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ +++|...++.+...|+ +|+++++.++..+.++++ +... .+..+-.+.+..+.+.+.. .+++|
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 4689999987 9999999988888999 899988766544444433 3222 2222211122222222211 14799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 109 ~lv~nAg~ 116 (273)
T 3uf0_A 109 VLVNNAGI 116 (273)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999884
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.012 Score=48.85 Aligned_cols=75 Identities=13% Similarity=0.177 Sum_probs=49.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-Ee--CCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i--~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
+++||+|+ |++|...+..+...|+ +|+.+++++++++.+. +++... .+ |..+ ..++.+.+.+ ....+|++++
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~-~~~~~d~lv~ 78 (230)
T 3guy_A 2 SLIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCLSNNVGYRARDLAS-HQEVEQLFEQ-LDSIPSTVVH 78 (230)
T ss_dssp -CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTCSSCCCEEECCTTC-HHHHHHHHHS-CSSCCSEEEE
T ss_pred CEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhccCeEeecCCC-HHHHHHHHHH-HhhcCCEEEE
Confidence 36899987 9999999988888999 8999999998876664 343221 22 2222 1233333333 2334599999
Q ss_pred cCC
Q 022865 271 CIG 273 (291)
Q Consensus 271 ~~g 273 (291)
+.|
T Consensus 79 ~Ag 81 (230)
T 3guy_A 79 SAG 81 (230)
T ss_dssp CCC
T ss_pred eCC
Confidence 988
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0032 Score=49.77 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=64.9
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC-EEeCCCCCCchHHHHHHhhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~-~~i~~~~~~~~~~~~v~~~~ 261 (291)
.....+.++++||-+|+|. |..+..+++..+..+|+++|.+++.++.+++ .+.+ .++...+ ..+ .+.. .
T Consensus 18 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d-~~~---~~~~-~ 91 (178)
T 3hm2_A 18 ISALAPKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQG-APR---AFDD-V 91 (178)
T ss_dssp HHHHCCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECC-TTG---GGGG-C
T ss_pred HHHhcccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecc-hHh---hhhc-c
Confidence 3445678889999999986 8889999988754499999999998888764 3443 2211111 111 1111 1
Q ss_pred CCCccEEEEcCCC--hHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGN--VSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~--~~~~~~~~~~l~~~ 288 (291)
.+.||+|+....- ...++.+.+.|+++
T Consensus 92 ~~~~D~i~~~~~~~~~~~l~~~~~~L~~g 120 (178)
T 3hm2_A 92 PDNPDVIFIGGGLTAPGVFAAAWKRLPVG 120 (178)
T ss_dssp CSCCSEEEECC-TTCTTHHHHHHHTCCTT
T ss_pred CCCCCEEEECCcccHHHHHHHHHHhcCCC
Confidence 1479999976433 34789999999998
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0041 Score=53.37 Aligned_cols=80 Identities=26% Similarity=0.297 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE-EeCCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
.++++||+|+ |.+|...++.+...|+ +|++++++.++++.+. +++... .+..+- +..++.+.+.+.. .+++|+
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 82 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGD-TVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDV 82 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4578999987 9999999988888999 8999999988765553 444322 222221 1233333333322 237999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 83 lv~~Ag~ 89 (281)
T 3m1a_A 83 LVNNAGR 89 (281)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999884
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0066 Score=51.37 Aligned_cols=78 Identities=19% Similarity=0.167 Sum_probs=51.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..++.+.+.+.. .++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHhCC
Confidence 468999987 9999999988888999 8999999887665432 224322 22 2222 233333333321 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=96.62 E-value=0.006 Score=51.79 Aligned_cols=80 Identities=15% Similarity=0.135 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHh---hcCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVD---LTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~---~~~g 263 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++++.+. +.+... .+..+- +..++.+.+.+ ..++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999987 9999999988888999 8999999887655432 224322 222221 11223333332 2225
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 92 ~id~li~~Ag~ 102 (266)
T 1xq1_A 92 KLDILINNLGA 102 (266)
T ss_dssp CCSEEEEECCC
T ss_pred CCcEEEECCCC
Confidence 79999999884
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0076 Score=51.76 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHH----HHHhcCCCEE-e--CCCCCCchH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFD----RAKNFGVTEF-V--NPKDHDKPI 253 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~------------~~~~~----~~~~~ga~~~-i--~~~~~~~~~ 253 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.++++ .++++ ..++.+.... + |..+ ..++
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v 86 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKD-RAAL 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHH
Confidence 4689999987 9999999998889999 89998886 33332 2234444332 2 2222 2233
Q ss_pred HHHHHhhc--CCCccEEEEcCCC
Q 022865 254 QQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 254 ~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
.+.+.+.. .+++|++|++.|.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 33333322 2479999999883
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.024 Score=43.86 Aligned_cols=78 Identities=10% Similarity=0.001 Sum_probs=52.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHHh---cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAKN---FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~~~---~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
..+++|+|+|.+|...++.+...|. .|++++++ +++.+.+.+ .|. .++.-+. .-.+.+.+..-.++|+|+-
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~-~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~---~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNA-DVIPGDS---NDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTC-EEEESCT---TSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCC-CEEEEECCChHHHHHHHHhhcCCC-eEEEcCC---CCHHHHHHcChhhCCEEEE
Confidence 4578999999999999999999998 89999887 455544432 243 2332221 1123344432237999999
Q ss_pred cCCChHH
Q 022865 271 CIGNVSV 277 (291)
Q Consensus 271 ~~g~~~~ 277 (291)
++++...
T Consensus 78 ~~~~d~~ 84 (153)
T 1id1_A 78 LSDNDAD 84 (153)
T ss_dssp CSSCHHH
T ss_pred ecCChHH
Confidence 9998653
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0071 Score=51.33 Aligned_cols=78 Identities=17% Similarity=0.198 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---cCCCE-Ee--CCCCCCchHHHHHHhh---cC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---FGVTE-FV--NPKDHDKPIQQVLVDL---TD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~ga~~-~i--~~~~~~~~~~~~v~~~---~~ 262 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. + .+... .+ |..+ ..++.+.+.+. ..
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQ-ESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 4678999987 9999999988888999 8999999887765432 2 24322 22 2222 23333444433 14
Q ss_pred CCccEEEEcCC
Q 022865 263 GGVDYSFECIG 273 (291)
Q Consensus 263 gg~d~v~d~~g 273 (291)
+++|++|++.|
T Consensus 82 g~id~lvnnAg 92 (260)
T 2qq5_A 82 GRLDVLVNNAY 92 (260)
T ss_dssp TCCCEEEECCC
T ss_pred CCceEEEECCc
Confidence 57999999995
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0073 Score=51.73 Aligned_cols=80 Identities=20% Similarity=0.265 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHHH----HhcCCCEE-eCCCC-CCchHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDRA----KNFGVTEF-VNPKD-HDKPIQ 254 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~------------~~~~~~~----~~~ga~~~-i~~~~-~~~~~~ 254 (291)
.++++||+|+ +++|...++.+...|+ +|++++++ .++++.. ++.+.... +..+- +..++.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 5689999987 9999999988888999 89998876 4443332 33444332 22221 123333
Q ss_pred HHHHhhc--CCCccEEEEcCCC
Q 022865 255 QVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 255 ~~v~~~~--~gg~d~v~d~~g~ 274 (291)
+.+.+.. .+++|++|++.|.
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~ 112 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGI 112 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 3333322 2479999999884
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0063 Score=52.05 Aligned_cols=79 Identities=11% Similarity=0.040 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHH-hc----CCCE-Ee--CCCCCC----chHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAK-NF----GVTE-FV--NPKDHD----KPIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~~-~~----ga~~-~i--~~~~~~----~~~~~~v~~ 259 (291)
+++++||+|+ |++|...+..+...|+ +|+.+++ ++++++.+. ++ +... .+ |..+ . .++.+.+.+
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSL-SSSLLDCCEDIIDC 87 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-STTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCC-ccccHHHHHHHHHH
Confidence 4678999987 9999999988888999 8999988 777654432 22 4322 22 3322 2 233333333
Q ss_pred hc--CCCccEEEEcCCC
Q 022865 260 LT--DGGVDYSFECIGN 274 (291)
Q Consensus 260 ~~--~gg~d~v~d~~g~ 274 (291)
.. .+++|++|++.|.
T Consensus 88 ~~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHhcCCCCEEEECCCC
Confidence 22 2479999999883
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0078 Score=51.67 Aligned_cols=79 Identities=22% Similarity=0.285 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHHH----HhcCCCEE-e--CCCCCCchH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDRA----KNFGVTEF-V--NPKDHDKPI 253 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~------------~~~~~~~----~~~ga~~~-i--~~~~~~~~~ 253 (291)
.++++||+|+ +++|...++.+...|+ +|+.++++ .++++.+ ++.+.... + |..+ ..++
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRD-RAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCC-HHHH
Confidence 4689999987 9999999988889999 89998876 4433332 23343322 2 2222 2333
Q ss_pred HHHHHhhc--CCCccEEEEcCCC
Q 022865 254 QQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 254 ~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
.+.+.+.. .+++|++|++.|.
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 33333322 1379999999884
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0059 Score=51.92 Aligned_cols=79 Identities=18% Similarity=0.151 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |++|...++.+...|+ +|+.+ ++++++++.+. +.+... .+..+- +..++.+.+.+.. .+
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5688999987 9999999998889999 77775 78877654442 234332 222221 1233333333322 24
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|++.|
T Consensus 82 ~id~lv~nAg 91 (258)
T 3oid_A 82 RLDVFVNNAA 91 (258)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999987
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0011 Score=55.30 Aligned_cols=94 Identities=15% Similarity=0.130 Sum_probs=62.6
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCC--EEeCCCCCCchHHHHHHhhc-C
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT--EFVNPKDHDKPIQQVLVDLT-D 262 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~--~~i~~~~~~~~~~~~v~~~~-~ 262 (291)
....++.+||-+|+| .|..+..+++.....+|++++.+++.++.+++. |.. ..+...+ ..+.+.... .
T Consensus 50 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d----~~~~~~~~~~~ 124 (233)
T 2gpy_A 50 LKMAAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGD----ALQLGEKLELY 124 (233)
T ss_dssp HHHHCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSC----GGGSHHHHTTS
T ss_pred HhccCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECC----HHHHHHhcccC
Confidence 345678899999988 588889999988434999999999988887653 432 1111111 111122222 3
Q ss_pred CCccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 263 GGVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
+.||+||..... ...+..+.+.|+++
T Consensus 125 ~~fD~I~~~~~~~~~~~~l~~~~~~L~pg 153 (233)
T 2gpy_A 125 PLFDVLFIDAAKGQYRRFFDMYSPMVRPG 153 (233)
T ss_dssp CCEEEEEEEGGGSCHHHHHHHHGGGEEEE
T ss_pred CCccEEEECCCHHHHHHHHHHHHHHcCCC
Confidence 479988876553 45577788888888
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0054 Score=52.65 Aligned_cols=78 Identities=12% Similarity=0.092 Sum_probs=52.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC--C-EEeCCCC-CCchHHHHHHhhcC--CCccE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--T-EFVNPKD-HDKPIQQVLVDLTD--GGVDY 267 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga--~-~~i~~~~-~~~~~~~~v~~~~~--gg~d~ 267 (291)
+++||+|+ |++|...++.+...|+ +|+++++++++++.+. ++.. . ..+..+- +..++.+.+.+... +++|+
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 100 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGW-SLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 68999987 9999999988888999 8999999988765543 3321 1 2222221 12344444444322 37899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+|++.|.
T Consensus 101 lvnnAG~ 107 (272)
T 2nwq_A 101 LINNAGL 107 (272)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999874
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0046 Score=55.16 Aligned_cols=79 Identities=19% Similarity=0.283 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhcCCCEE-e--CCCCCCchHHHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-----------FDRAKNFGVTEF-V--NPKDHDKPIQQVLV 258 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-----------~~~~~~~ga~~~-i--~~~~~~~~~~~~v~ 258 (291)
.++++||+|+ +++|.+.+..+...|+ +|+.+++++++ .+.+++.+.... + |..+ ..++.+.+.
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d-~~~v~~~~~ 121 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRD-EQQISAAVE 121 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCC-HHHHHHHHH
Confidence 5789999988 9999999888888899 89998888763 223344454322 2 3222 233333333
Q ss_pred hhc--CCCccEEEEcCCC
Q 022865 259 DLT--DGGVDYSFECIGN 274 (291)
Q Consensus 259 ~~~--~gg~d~v~d~~g~ 274 (291)
+.. .+++|++|++.|.
T Consensus 122 ~~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 322 1479999999984
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0082 Score=52.18 Aligned_cols=78 Identities=21% Similarity=0.278 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHhcCCCEE-e--CCCCCCchH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDR----AKNFGVTEF-V--NPKDHDKPI 253 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~------------~~~~~~----~~~~ga~~~-i--~~~~~~~~~ 253 (291)
.++++||+|+ +++|.+.++.+...|+ +|++++++ .++++. +++.+.... + |..+ ..++
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD-FDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC-HHHH
Confidence 4689999987 9999999988888999 89988876 444332 233454332 2 2222 2333
Q ss_pred HHHHHhhc--CCCccEEEEcCC
Q 022865 254 QQVLVDLT--DGGVDYSFECIG 273 (291)
Q Consensus 254 ~~~v~~~~--~gg~d~v~d~~g 273 (291)
.+.+.+.. .+++|++|++.|
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 33333322 247999999988
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0084 Score=50.58 Aligned_cols=80 Identities=15% Similarity=0.125 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhc--CCCE-Ee--CCCCCC-chHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNF--GVTE-FV--NPKDHD-KPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~~~~~--ga~~-~i--~~~~~~-~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |++|...++.+...|+.+|+.+++++ +.++.+.+. +... .+ |..+ . .++.+.+.+.. .
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~ 82 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTV-PVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTS-CHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCC-ChHHHHHHHHHHHHhc
Confidence 4678999987 99999999888889994488887775 333333332 2211 22 2222 2 33433343322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 83 g~id~lv~~Ag~ 94 (254)
T 1sby_A 83 KTVDILINGAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 379999999883
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0036 Score=53.02 Aligned_cols=75 Identities=19% Similarity=0.008 Sum_probs=50.2
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh---cCCCEEeCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN---FGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~---~ga~~~i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++||+|+ |++|...++.+...|+ +|+.+++++++++.+.+ .+.+.... + ..++.+.+.+.. .+++|++|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~-d--~~~v~~~~~~~~~~~g~iD~lv 77 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPM-S--EQEPAELIEAVTSAYGQVDVLV 77 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEEC-C--CCSHHHHHHHHHHHHSCCCEEE
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhcCCcEEEE-C--HHHHHHHHHHHHHHhCCCCEEE
Confidence 46889987 9999999998888999 89999888876654432 24332222 2 233333333322 14799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 78 ~nAg~ 82 (254)
T 1zmt_A 78 SNDIF 82 (254)
T ss_dssp EECCC
T ss_pred ECCCc
Confidence 99874
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0049 Score=53.10 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE--EeCCCCC-CchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE--FVNPKDH-DKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~--~i~~~~~-~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++++.+. +.+... .+..+-. ..++.+.+.+.. .+
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4678999988 9999999988888999 8999999988765542 234322 2222211 123333333221 24
Q ss_pred CccEEEEc-CC
Q 022865 264 GVDYSFEC-IG 273 (291)
Q Consensus 264 g~d~v~d~-~g 273 (291)
++|++|++ .|
T Consensus 106 ~iD~li~naag 116 (286)
T 1xu9_A 106 GLDMLILNHIT 116 (286)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999998 45
|
| >1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0061 Score=54.75 Aligned_cols=91 Identities=18% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCC-------------CCchH-HHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKD-------------HDKPI-QQVL 257 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~-------------~~~~~-~~~v 257 (291)
-+|++|+|+|.|.+|..+++.+..+|+ +|++.|.+.++++ ++++++++.+ ...+ ....+ .+.+
T Consensus 171 L~GktV~V~G~G~VG~~~A~~L~~~Ga-kVvv~D~~~~~l~~~a~~~ga~~v-~~~~ll~~~~DIvip~a~~~~I~~~~~ 248 (364)
T 1leh_A 171 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGADAV-APNAIYGVTCDIFAPCALGAVLNDFTI 248 (364)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCCEEC-CGGGTTTCCCSEEEECSCSCCBSTTHH
T ss_pred CCcCEEEEECchHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHcCCEEE-ChHHHhccCCcEeeccchHHHhCHHHH
Confidence 468999999999999999999999999 8999999988776 4556665321 1000 00000 0111
Q ss_pred HhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 258 VDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+ +.++|++.+..+.+.+.+.+.|+..
T Consensus 249 ~~l---g~~iV~e~An~p~t~~ea~~~L~~~ 276 (364)
T 1leh_A 249 PQL---KAKVIAGSADNQLKDPRHGKYLHEL 276 (364)
T ss_dssp HHC---CCSEECCSCSCCBSSHHHHHHHHHH
T ss_pred HhC---CCcEEEeCCCCCcccHHHHHHHHhC
Confidence 122 5678888877765444566666554
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0088 Score=51.92 Aligned_cols=80 Identities=18% Similarity=0.252 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ | ++|...++.+...|+ +|+.++++++..+.+ ++.+....+..+- +..++.+.+.+.. .+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG 107 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5689999987 5 999998888888899 899998887654433 3344333332222 1233333333322 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 108 ~iD~lVnnAG~ 118 (296)
T 3k31_A 108 SLDFVVHAVAF 118 (296)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999984
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.014 Score=47.69 Aligned_cols=69 Identities=19% Similarity=0.291 Sum_probs=48.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|||+|+ |.+|...++.+...|. +|+++++++++++.+. -+. .++..+-.+.+. +. + +++|+||+++|.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~-~~~-~~~~~D~~d~~~-~~---~--~~~d~vi~~ag~ 71 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGH-EVTAIVRNAGKITQTH-KDI-NILQKDIFDLTL-SD---L--SDQNVVVDAYGI 71 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCSHHHHHHC-SSS-EEEECCGGGCCH-HH---H--TTCSEEEECCCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCC-EEEEEEcCchhhhhcc-CCC-eEEeccccChhh-hh---h--cCCCEEEECCcC
Confidence 5899997 9999999999989998 9999999988776543 233 222222111111 22 2 369999999986
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0067 Score=50.88 Aligned_cols=79 Identities=19% Similarity=0.266 Sum_probs=51.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
++++||+|+ |.+|...+..+...|+ +|+++++++++++.+. ++ +... .+..+- +..++.+.+.+.. .++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 568999987 9999999988888998 8999999887765442 22 2221 222221 1223333333322 137
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 81 id~li~~Ag~ 90 (250)
T 2cfc_A 81 IDVLVNNAGI 90 (250)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0078 Score=51.21 Aligned_cols=79 Identities=20% Similarity=0.264 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC-----CC-EEe--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG-----VT-EFV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~g-----a~-~~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++.+.+ .++. .. ..+ |..+ ..++.+.+.+..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCC-HHHHHHHHHHHHHH
Confidence 4678999988 9999999988888999 899999988765433 2221 11 122 2222 233333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 84 ~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 84 FGRLDILVNNAGV 96 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1379999999984
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.015 Score=49.97 Aligned_cols=45 Identities=20% Similarity=0.231 Sum_probs=38.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+++++|+|+|+.|.+++..+...| .+|+++.++.+|.+.+.+++.
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G-~~v~V~nRt~~ka~~la~~~~ 162 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQG-LQVSVLNRSSRGLDFFQRLGC 162 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSSCTTHHHHHHHTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHCCC
Confidence 889999999999999999999999 599999999988755546663
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0079 Score=52.03 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |.+|...+..+...|+ +|+++++++++++.+. ++ +... .+..+- +..++.+.+.+.. .+
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 4678999988 9999999988888999 8999999887765432 22 4322 222221 1233333333321 24
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
.+|++|++.|
T Consensus 104 ~id~li~~Ag 113 (302)
T 1w6u_A 104 HPNIVINNAA 113 (302)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 7999999988
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.004 Score=52.91 Aligned_cols=79 Identities=10% Similarity=0.191 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcC---CCeEEEEcCChhhHHHHHhc---CCCE-Ee--CCCCCCchHHHHHHhh---
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAG---ASRVIGIDIDPKKFDRAKNF---GVTE-FV--NPKDHDKPIQQVLVDL--- 260 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g---~~~v~~~~~~~~~~~~~~~~---ga~~-~i--~~~~~~~~~~~~v~~~--- 260 (291)
+++++||+|+ |.+|...++.+...| + +|++++++.++.+.++++ +... .+ |..+ ..++.+.+.+.
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGV 97 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCc-EEEEEecChhhhHHHHHhhccCCceEEEEecCCC-hHHHHHHHHHHHHh
Confidence 4578999987 999999988888888 6 899998887654433332 3222 22 2222 23344444332
Q ss_pred cCC-CccEEEEcCCC
Q 022865 261 TDG-GVDYSFECIGN 274 (291)
Q Consensus 261 ~~g-g~d~v~d~~g~ 274 (291)
.+. ++|++|+++|.
T Consensus 98 ~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 98 TKDQGLNVLFNNAGI 112 (267)
T ss_dssp HGGGCCSEEEECCCC
T ss_pred cCCCCccEEEECCCc
Confidence 222 69999999883
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0062 Score=51.23 Aligned_cols=79 Identities=22% Similarity=0.278 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ |++|...++.+...|+ +|+++++ ++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVAN-AEDVTNMVKQTVDVF 80 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 3678999987 9999999988888999 8888887 66665433 2234332 22 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 81 g~id~lv~nAg~ 92 (246)
T 2uvd_A 81 GQVDILVNNAGV 92 (246)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999883
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0077 Score=52.19 Aligned_cols=79 Identities=16% Similarity=0.241 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHH----HHhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR----AKNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~----~~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ +++|...++.+...|+ +|+.+++++++ .+. .++.+.... + |..+ ..++.+.+.+.. .
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSD-EQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 5789999987 9999999988888999 88888887653 222 233444332 2 2222 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 124 g~iD~lvnnAg~ 135 (291)
T 3ijr_A 124 GSLNILVNNVAQ 135 (291)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999773
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0045 Score=53.05 Aligned_cols=79 Identities=18% Similarity=0.234 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---C---CC-EEe--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---G---VT-EFV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---g---a~-~~i--~~~~~~~~~~~~v~~~~- 261 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++.+. ++ . .. ..+ |..+ ..++.+.+.+..
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCC-HHHHHHHHHHHHH
Confidence 4678999987 9999999988888899 8999999988765442 23 2 11 122 2222 223333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 2479999999884
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.006 Score=52.50 Aligned_cols=79 Identities=20% Similarity=0.195 Sum_probs=50.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHH----HHhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDR----AKNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~----~~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++ .+. +++.+.+.. + |..+ ..++.+.+.+.. .
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 105 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGV-VEDIVRMFEEAVKIF 105 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 4678999987 9999999988888999 88888877643 222 233454322 2 2222 223333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 106 g~iD~lv~~Ag~ 117 (283)
T 1g0o_A 106 GKLDIVCSNSGV 117 (283)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999883
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0027 Score=53.26 Aligned_cols=97 Identities=15% Similarity=0.115 Sum_probs=64.2
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhc---
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT--- 261 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~--- 261 (291)
....++++||-+|+|. |..+..+++..+ ..+|++++.+++..+.+++. |.+..+.... .+..+.+.++.
T Consensus 56 ~~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 56 TKISGAKRIIEIGTFT-GYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKL--GSALETLQVLIDSK 132 (239)
T ss_dssp HHHHTCSEEEEECCTT-CHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCS
T ss_pred HHhhCcCEEEEEeCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEE--CCHHHHHHHHHhhc
Confidence 3456788999999874 888999999874 34999999999988877653 4432111111 12222233221
Q ss_pred -----------C-CCccEEEEcCCCh---HHHHHHHHHhhccC
Q 022865 262 -----------D-GGVDYSFECIGNV---SVMRAALECCHKVS 289 (291)
Q Consensus 262 -----------~-gg~d~v~d~~g~~---~~~~~~~~~l~~~g 289 (291)
+ +.||+||...... ..++.+.+.|+++|
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG 175 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGG 175 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE
T ss_pred ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCe
Confidence 2 5799999876644 55688888888883
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0074 Score=51.12 Aligned_cols=80 Identities=20% Similarity=0.150 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhhHHHH----HhcCCC-EEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKKFDRA----KNFGVT-EFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~~~~----~~~ga~-~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...+..+.. .|+ +|+.++++.++.+.+ ++.+.. ..+..+- +..++.+.+.+.. .+
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4678999987 9999998887777 899 899998987765433 222322 2222221 1233333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 82 ~id~li~~Ag~ 92 (276)
T 1wma_A 82 GLDVLVNNAGI 92 (276)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999884
|
| >1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.012 Score=50.54 Aligned_cols=49 Identities=22% Similarity=0.190 Sum_probs=39.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCC
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGV 240 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~~~ga 240 (291)
+..+++++|+|+|+.+.+++..+..+|+.+|+++.++.+|. +++++++.
T Consensus 116 ~~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~ 165 (271)
T 1npy_A 116 LNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY 165 (271)
T ss_dssp CCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC
Confidence 33567899999999999999989999988899999998774 44556654
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0067 Score=51.30 Aligned_cols=79 Identities=22% Similarity=0.257 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCCE-EeCCCC-CCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~--~~~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg~d 266 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++ .+.+++.+... .+..+- +..++.+.+.+.. .+++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGA-NIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3678999988 9999999988888999 89998887652 12223334332 222221 1223333333322 24799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
++|++.|
T Consensus 82 ~lv~~Ag 88 (255)
T 2q2v_A 82 ILVNNAG 88 (255)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999988
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0086 Score=51.89 Aligned_cols=78 Identities=14% Similarity=0.221 Sum_probs=51.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h--------cCCCE-Ee--CCCCCCchHHHHHHhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N--------FGVTE-FV--NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~--------~ga~~-~i--~~~~~~~~~~~~v~~~ 260 (291)
+++++||+|+ |.+|...+..+...|+ +|+.++++.++++.+. + .+... .+ |..+ ..++.+.+.+.
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~ 94 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKST 94 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCC-HHHHHHHHHHH
Confidence 4678999988 9999999988888999 8999999887665432 2 12222 22 2222 22333333332
Q ss_pred c--CCCccEEEEcCC
Q 022865 261 T--DGGVDYSFECIG 273 (291)
Q Consensus 261 ~--~gg~d~v~d~~g 273 (291)
. .+++|++|+++|
T Consensus 95 ~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 95 LDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 2 137999999988
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0051 Score=50.66 Aligned_cols=88 Identities=7% Similarity=0.057 Sum_probs=54.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChh-hHHHHHhcCCC-EEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPK-KFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~-~~g~~~v~~~~~~~~-~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
++|||+|+ |.+|...++.+. ..|+ +|++++++++ +++.+.+.+.. ..+..+-.+. +.+.+... ++|+||++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~---~~~~~~~~-~~d~vv~~ 80 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDM-HITLYGRQLKTRIPPEIIDHERVTVIEGSFQNP---GXLEQAVT-NAEVVFVG 80 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCC-EEEEEESSHHHHSCHHHHTSTTEEEEECCTTCH---HHHHHHHT-TCSEEEES
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCc-eEEEEecCccccchhhccCCCceEEEECCCCCH---HHHHHHHc-CCCEEEEc
Confidence 46999997 999999888777 8899 8999999988 66554322222 2222221112 22333322 68999999
Q ss_pred CCChHH-HHHHHHHhhcc
Q 022865 272 IGNVSV-MRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~-~~~~~~~l~~~ 288 (291)
+|.... .+.+++.++..
T Consensus 81 ag~~n~~~~~~~~~~~~~ 98 (221)
T 3r6d_A 81 AMESGSDMASIVKALSRX 98 (221)
T ss_dssp CCCCHHHHHHHHHHHHHT
T ss_pred CCCCChhHHHHHHHHHhc
Confidence 986221 44445555443
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0075 Score=51.77 Aligned_cols=78 Identities=13% Similarity=0.144 Sum_probs=52.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h----cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N----FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~----~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+.+. + .+... .+ |..+ ..++.+.+.+.. .
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRA-PPAVMAAVDQALKEF 103 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999987 9999999988888899 9999999887654332 2 24332 22 2222 223333333322 2
Q ss_pred CCccEEEEcCC
Q 022865 263 GGVDYSFECIG 273 (291)
Q Consensus 263 gg~d~v~d~~g 273 (291)
+++|++|++.|
T Consensus 104 g~id~lv~nAg 114 (277)
T 4fc7_A 104 GRIDILINCAA 114 (277)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 47999999998
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.009 Score=51.29 Aligned_cols=80 Identities=24% Similarity=0.363 Sum_probs=51.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHH----HhcCCCEE-e--CCCCCCc
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-------------DPKKFDRA----KNFGVTEF-V--NPKDHDK 251 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-------------~~~~~~~~----~~~ga~~~-i--~~~~~~~ 251 (291)
-.++++||+|+ +++|...++.+...|+ +|+++++ ++++++.+ ++.+.... + |..+ ..
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~ 90 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRD-DA 90 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-HH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HH
Confidence 35789999987 9999999988888999 8999877 45554433 23343322 2 2222 23
Q ss_pred hHHHHHHhhc--CCCccEEEEcCCC
Q 022865 252 PIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 252 ~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
++.+.+.+.. .+++|++|++.|.
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCC
Confidence 3333333322 2479999999884
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=96.51 E-value=0.019 Score=52.33 Aligned_cols=87 Identities=11% Similarity=0.107 Sum_probs=55.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHH-hcCC-----CEEe--CCCCCCchHHHHHHhhcCCCc
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA--SRVIGIDIDPKKFDRAK-NFGV-----TEFV--NPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~--~~v~~~~~~~~~~~~~~-~~ga-----~~~i--~~~~~~~~~~~~v~~~~~gg~ 265 (291)
.+|+|+|+|.+|..+++.+...|. ..|++.+++.++.+.+. +++. -..+ +..+ ..++.+.+.+. ++
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d-~~~l~~~l~~~---~~ 77 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADS-IEELVALINEV---KP 77 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTC-HHHHHHHHHHH---CC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCC-HHHHHHHHHhh---CC
Confidence 378999999999999888877773 48999999998876543 3321 1222 2221 12333333332 58
Q ss_pred cEEEEcCCChHHHHHHHHHhh
Q 022865 266 DYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 266 d~v~d~~g~~~~~~~~~~~l~ 286 (291)
|+||+++|.......+..+++
T Consensus 78 DvVin~ag~~~~~~v~~a~l~ 98 (405)
T 4ina_A 78 QIVLNIALPYQDLTIMEACLR 98 (405)
T ss_dssp SEEEECSCGGGHHHHHHHHHH
T ss_pred CEEEECCCcccChHHHHHHHH
Confidence 999999997544444445544
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.013 Score=49.89 Aligned_cols=78 Identities=21% Similarity=0.149 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-h---c--CCCE-EeCCCCCCc-hHHHHHHhhcCCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-N---F--GVTE-FVNPKDHDK-PIQQVLVDLTDGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~---~--ga~~-~i~~~~~~~-~~~~~v~~~~~gg 264 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++++.+. + . +... .+..+-.+. .+.+.+.+ -++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~g~ 85 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--YPK 85 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH--CCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh--cCC
Confidence 4688999987 9999999988888999 8999999987654432 2 2 1211 121221122 33333333 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 86 id~lv~nAg~ 95 (267)
T 3t4x_A 86 VDILINNLGI 95 (267)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0065 Score=52.23 Aligned_cols=79 Identities=23% Similarity=0.211 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc-CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT-DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~-~gg 264 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+... .+ |..+ ..+..+.+.+.. .++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSE-AGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTS-TTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCC-HHHHHHHHHHHHHhCC
Confidence 5688999987 9999999988888999 8999988887654432 234332 22 2222 233333333221 158
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 110 iD~lvnnAg~ 119 (275)
T 4imr_A 110 VDILVINASA 119 (275)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999983
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0048 Score=51.55 Aligned_cols=79 Identities=16% Similarity=0.211 Sum_probs=52.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHHhc-CCCE-EeCCCC-CCchHHHHHHh---hcCC-C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAKNF-GVTE-FVNPKD-HDKPIQQVLVD---LTDG-G 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g--~~~v~~~~~~~~~~~~~~~~-ga~~-~i~~~~-~~~~~~~~v~~---~~~g-g 264 (291)
++++||+|+ |.+|...++.+...| + +|++++++.++++.++++ +... .+..+- +...+.+.+.+ ..+. +
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~-~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIR-HIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCC-EEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCc-EEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 578999987 999999988888888 7 999999998877766655 2221 222221 11233333332 2221 6
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 82 id~li~~Ag~ 91 (250)
T 1yo6_A 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCcc
Confidence 9999999873
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.011 Score=50.83 Aligned_cols=80 Identities=19% Similarity=0.245 Sum_probs=50.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHH-h---c-CCCE-EeCCCC-CCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAK-N---F-GVTE-FVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~~-~---~-ga~~-~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|...+..+...|+ +|+.+++ ++++++.+. + . +... .+..+- +..++.+.+.+.. .
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 4678999987 9999999988889999 8999888 444443332 2 2 3222 222221 1233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 103 g~iD~lv~nAg~ 114 (281)
T 3v2h_A 103 GGADILVNNAGV 114 (281)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.013 Score=51.51 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=35.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC---hhhHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID---PKKFDR 234 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~---~~~~~~ 234 (291)
.++++||+|+|+.|.+++..+...|+++|+++.++ .+|.+.
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~ 190 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVA 190 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHH
Confidence 57899999999999999999999999889999998 555443
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.0089 Score=50.21 Aligned_cols=79 Identities=25% Similarity=0.384 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE--Ee--CCCCCCchHHHHHHhhc-CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE--FV--NPKDHDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~--~i--~~~~~~~~~~~~v~~~~-~gg~d 266 (291)
.++++||+|+ |.+|...++.+...|+ +|+++++++++++.+ ++++... .+ |..+ ..++.+.+.+.. .+++|
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~~id 87 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGA-RLILIDREAAALDRAAQELGAAVAARIVADVTD-AEAMTAAAAEAEAVAPVS 87 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEEECCTTC-HHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcccceeEEEEecCC-HHHHHHHHHHHHhhCCCc
Confidence 4678999988 9999999988888999 899999998876544 3444322 22 2222 223333332211 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 88 ~li~~Ag~ 95 (254)
T 2wsb_A 88 ILVNSAGI 95 (254)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999883
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=96.48 E-value=0.0081 Score=50.87 Aligned_cols=78 Identities=19% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHH-Hh---cCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRA-KN---FGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~--~~~~-~~---~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
++++||+|+ |++|...++.+...|+ +|+.+++++++ ++.+ ++ .+... .+ |..+ ..++.+.+.+.. .
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTD-KANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 578999987 9999998888888899 89999888776 4332 22 23322 22 2222 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 80 g~iD~lv~nAg~ 91 (258)
T 3a28_C 80 GGFDVLVNNAGI 91 (258)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999883
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.013 Score=51.68 Aligned_cols=77 Identities=19% Similarity=0.298 Sum_probs=49.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-----PKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-----~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~ 261 (291)
++++||+|+ |++|...++.+...|+ +|+++.++ .++++.+ ++.+... .+ |..+ ..++.+.+.+..
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~-~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~ 82 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGH-RVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQS-QVSVDRAIDQII 82 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHH
Confidence 578999987 9999999998889999 88887654 3333333 2334322 22 2222 234444444332
Q ss_pred --CCCccEEEEcCC
Q 022865 262 --DGGVDYSFECIG 273 (291)
Q Consensus 262 --~gg~d~v~d~~g 273 (291)
.+++|++|++.|
T Consensus 83 ~~~g~iD~lVnnAG 96 (324)
T 3u9l_A 83 GEDGRIDVLIHNAG 96 (324)
T ss_dssp HHHSCCSEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 247999999998
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0057 Score=52.82 Aligned_cols=79 Identities=19% Similarity=0.298 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-----------HHHHHhcCCCEE-e--CCCCCCchHHHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-----------FDRAKNFGVTEF-V--NPKDHDKPIQQVLV 258 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-----------~~~~~~~ga~~~-i--~~~~~~~~~~~~v~ 258 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++++++ .+..++.+.... + |..+ ..++.+.+.
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRD-GDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTS-HHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHH
Confidence 4689999987 9999998888888899 89999888752 222233444322 2 2222 233333333
Q ss_pred hhc--CCCccEEEEcCCC
Q 022865 259 DLT--DGGVDYSFECIGN 274 (291)
Q Consensus 259 ~~~--~gg~d~v~d~~g~ 274 (291)
+.. .+++|++|++.|.
T Consensus 86 ~~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHHSCCSEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCC
Confidence 322 2379999999883
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0072 Score=51.63 Aligned_cols=80 Identities=18% Similarity=0.259 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|...++.+...|+ +|+.++++ +++.+.+ ++.+... ++..+- +..++.+.+.+.. .+
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 106 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG 106 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5688999987 9999998888888999 88888884 4433332 3344332 222221 1233333343322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 107 ~id~li~nAg~ 117 (271)
T 4iin_A 107 GLSYLVNNAGV 117 (271)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999884
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.012 Score=50.56 Aligned_cols=79 Identities=20% Similarity=0.260 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|...++.+...|+ +|+++++ ++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD-LSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTS-GGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 5688999987 9999999988889999 8888874 55544332 2334332 22 2222 234444444322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|+++|.
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 379999999985
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0064 Score=51.10 Aligned_cols=80 Identities=19% Similarity=0.213 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |.+|...++.+...|+ +|+++++++++++.+ ++.+... .+..+- +..++.+.+.+.. .++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999988 9999999888888898 899999988765433 2234322 222221 1223333333221 237
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 89 ~d~vi~~Ag~ 98 (255)
T 1fmc_A 89 VDILVNNAGG 98 (255)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999873
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0054 Score=51.60 Aligned_cols=79 Identities=27% Similarity=0.321 Sum_probs=50.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH-H---hcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA-K---NFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~-~---~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...+..+...|+ +|++++++ +++++.+ + +.+... .+ |..+ ..++.+.+.+.. .
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLAT-SEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4578999987 9999999988888899 89998887 6554433 2 224322 22 2222 223333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|+++|.
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999884
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.0075 Score=51.71 Aligned_cols=79 Identities=18% Similarity=0.265 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HH----HHHhcCCCEE-e--CCCCCCchHHHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FD----RAKNFGVTEF-V--NPKDHDKPIQQVLV 258 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-------~~----~~~~~ga~~~-i--~~~~~~~~~~~~v~ 258 (291)
.++++||+|+ +++|...++.+...|+ +|+.++++.++ ++ ..++.+.... + |..+ ..++.+.+.
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~ 82 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIRE-EDQVRAAVA 82 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTC-HHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCC-HHHHHHHHH
Confidence 4689999987 9999999988888999 89999887653 21 1223343322 2 2222 233333333
Q ss_pred hhc--CCCccEEEEcCCC
Q 022865 259 DLT--DGGVDYSFECIGN 274 (291)
Q Consensus 259 ~~~--~gg~d~v~d~~g~ 274 (291)
+.. .+++|++|++.|.
T Consensus 83 ~~~~~~g~iD~lvnnAG~ 100 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASA 100 (274)
T ss_dssp HHHHHHSCCCEEEECCCC
T ss_pred HHHHHcCCCCEEEECCCc
Confidence 322 2479999999984
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.44 E-value=0.011 Score=51.04 Aligned_cols=80 Identities=16% Similarity=0.197 Sum_probs=52.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCC--CeEEEEcCChhhHHHHHh-c-----CCCE-Ee--CCCCCCchHHHHHHhhc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGA--SRVIGIDIDPKKFDRAKN-F-----GVTE-FV--NPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~--~~v~~~~~~~~~~~~~~~-~-----ga~~-~i--~~~~~~~~~~~~v~~~~ 261 (291)
.++++||+|+ +++|...+..+...|+ .+|+.++++.++++.+.+ + +... .+ |.. +..++.+.+.+..
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-d~~~v~~~~~~~~ 110 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-QAEKIKPFIENLP 110 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-CGGGHHHHHHTSC
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-CHHHHHHHHHHHH
Confidence 4689999987 9999988766655554 388999999887665532 2 3222 22 222 2345555555543
Q ss_pred C--CCccEEEEcCCC
Q 022865 262 D--GGVDYSFECIGN 274 (291)
Q Consensus 262 ~--gg~d~v~d~~g~ 274 (291)
. +++|++|++.|.
T Consensus 111 ~~~g~iD~lVnnAG~ 125 (287)
T 3rku_A 111 QEFKDIDILVNNAGK 125 (287)
T ss_dssp GGGCSCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 2 379999999883
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.011 Score=50.93 Aligned_cols=79 Identities=20% Similarity=0.252 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC----------------hhhHHHH----HhcCCCEE-e--CCCCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID----------------PKKFDRA----KNFGVTEF-V--NPKDH 249 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~----------------~~~~~~~----~~~ga~~~-i--~~~~~ 249 (291)
.++++||+|+ +++|...++.+...|+ +|+.++++ +++++.+ ++.+.... + |..+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~- 87 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD- 87 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC-
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC-
Confidence 5789999987 9999999988888999 89998776 4444333 22343322 2 2222
Q ss_pred CchHHHHHHhhc--CCCccEEEEcCCC
Q 022865 250 DKPIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 250 ~~~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
..++.+.+.+.. .+++|++|++.|.
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~ 114 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGI 114 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence 233333333322 2479999999883
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.0085 Score=52.61 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC------------hhhHHH----HHhcCCCEE-e--CCCCCCchH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID------------PKKFDR----AKNFGVTEF-V--NPKDHDKPI 253 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~------------~~~~~~----~~~~ga~~~-i--~~~~~~~~~ 253 (291)
.++++||+|+ +++|...++.+...|+ +|++++++ .++++. +++.+.... + |..+ ..++
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v 122 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRD-LASL 122 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHHH
Confidence 5689999987 9999999988889999 89888765 333332 233444332 2 2222 2333
Q ss_pred HHHHHhhc--CCCccEEEEcCCC
Q 022865 254 QQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 254 ~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
.+.+.+.. .+++|++|++.|.
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~ 145 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGI 145 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 33343322 2479999999883
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.43 E-value=0.013 Score=50.29 Aligned_cols=77 Identities=21% Similarity=0.284 Sum_probs=52.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-EeCCCC-CCchHHHHHHhhc-CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FVNPKD-HDKPIQQVLVDLT-DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i~~~~-~~~~~~~~v~~~~-~gg~d~v 268 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++... .+..+- +..++.+.+.+.. .+++|++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~l 107 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeE
Confidence 4678999988 9999999988888999 899999998877655 3455433 222221 1233444444431 1378999
Q ss_pred EEc
Q 022865 269 FEC 271 (291)
Q Consensus 269 ~d~ 271 (291)
|++
T Consensus 108 v~~ 110 (281)
T 3ppi_A 108 VVA 110 (281)
T ss_dssp EEC
T ss_pred EEc
Confidence 988
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=96.42 E-value=0.01 Score=52.12 Aligned_cols=85 Identities=19% Similarity=0.249 Sum_probs=58.1
Q ss_pred CEEEEEcCChHHHHHHHHHHH--cCCCeEEEEcCChhh--HHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEEE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKA--AGASRVIGIDIDPKK--FDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~--~g~~~v~~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~d 270 (291)
-+|.|+|+|.+|...+..+.. -+.+.+.+++.++++ +++++++|..... .++. .+.+.+.+ ++|+||+
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~~------~~~e-~ll~~~~~~~iDvV~~ 77 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTY------AGVE-GLIKLPEFADIDFVFD 77 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEES------SHHH-HHHHSGGGGGEEEEEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCccc------CCHH-HHHhccCCCCCcEEEE
Confidence 478999999999988877743 356344556777665 6777788864211 1222 33333223 7999999
Q ss_pred cCCChHHHHHHHHHhhc
Q 022865 271 CIGNVSVMRAALECCHK 287 (291)
Q Consensus 271 ~~g~~~~~~~~~~~l~~ 287 (291)
+++.....+.+.++++.
T Consensus 78 atp~~~h~~~a~~al~a 94 (312)
T 1nvm_B 78 ATSASAHVQNEALLRQA 94 (312)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHh
Confidence 99988778888888776
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.0079 Score=51.13 Aligned_cols=80 Identities=20% Similarity=0.311 Sum_probs=51.8
Q ss_pred CCCEEEEEcC-C-hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc---CCCE--EeCCCC-CCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-G-TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF---GVTE--FVNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g-~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~---ga~~--~i~~~~-~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ | ++|...+..+...|+ +|+.+++++++++.+. ++ +... .+..+- +..++.+.+.+.. .
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 5689999988 6 799999888888899 8999999988765443 22 2111 222221 1233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 100 g~id~li~~Ag~ 111 (266)
T 3o38_A 100 GRLDVLVNNAGL 111 (266)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCc
Confidence 379999999883
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.02 Score=47.50 Aligned_cols=98 Identities=14% Similarity=0.074 Sum_probs=63.5
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCC-EEeCCCCCCchHHHHHHhhcC
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~-~~i~~~~~~~~~~~~v~~~~~ 262 (291)
..+.+++.+||=+|+|. |..++.+++.++ ..+|++++.+++..+.+++ .|.. .-+.... .+..+.+..+..
T Consensus 51 ~~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~--gda~~~l~~~~~ 127 (221)
T 3dr5_A 51 TTNGNGSTGAIAITPAA-GLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLL--SRPLDVMSRLAN 127 (221)
T ss_dssp HSCCTTCCEEEEESTTH-HHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEEC--SCHHHHGGGSCT
T ss_pred hhCCCCCCCEEEEcCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEE--cCHHHHHHHhcC
Confidence 34444556999888876 888999999873 2399999999998877754 3433 1111111 123333333334
Q ss_pred CCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
+.||+||-.... ...++.+++.|+++|
T Consensus 128 ~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG 157 (221)
T 3dr5_A 128 DSYQLVFGQVSPMDLKALVDAAWPLLRRGG 157 (221)
T ss_dssp TCEEEEEECCCTTTHHHHHHHHHHHEEEEE
T ss_pred CCcCeEEEcCcHHHHHHHHHHHHHHcCCCc
Confidence 589988865432 345788889999983
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0068 Score=51.25 Aligned_cols=80 Identities=16% Similarity=0.161 Sum_probs=50.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |.+|...+..+...|+ +|+++++ ++++++.+ ++.+... .+..+- +..++.+.+.+.. .+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999987 9999999988888899 8999888 66655433 2234322 222221 1223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 85 ~id~li~~Ag~ 95 (261)
T 1gee_A 85 KLDVMINNAGL 95 (261)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.011 Score=51.05 Aligned_cols=79 Identities=15% Similarity=0.084 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHH-----hcCCCE-Ee--CCCCCCc------------
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAK-----NFGVTE-FV--NPKDHDK------------ 251 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~~-----~~ga~~-~i--~~~~~~~------------ 251 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.++ +++++++.+. +.+... .+ |..+ ..
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~ 85 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP 85 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCCCC----CCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCC-cccccccccccccc
Confidence 4678999987 9999999988888999 899998 8887655432 234322 22 3322 22
Q ss_pred -----hHHHHHHhhc--CCCccEEEEcCCC
Q 022865 252 -----PIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 252 -----~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
++.+.+.+.. .+++|++|++.|.
T Consensus 86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~ 115 (291)
T 1e7w_A 86 VTLFTRCAELVAACYTHWGRCDVLVNNASS 115 (291)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cchHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444444322 2479999999883
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.39 E-value=0.017 Score=51.18 Aligned_cols=83 Identities=14% Similarity=0.199 Sum_probs=58.3
Q ss_pred CEEEEEcCChHHHHHHHHHH-Hc-CCCeE-EEEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLAVAEGAK-AA-GASRV-IGIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~-~~-g~~~v-~~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
-+|.|+|+|.+|...++.++ .. ++ ++ .+.++++++.+. ++++|.+.++. ++.+.+. ...+|+|+.|
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~-~~vav~d~~~~~~~~~a~~~g~~~~~~------~~~~~l~---~~~~D~V~i~ 78 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGV-KLVAACALDSNQLEWAKNELGVETTYT------NYKDMID---TENIDAIFIV 78 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSE-EEEEEECSCHHHHHHHHHTTCCSEEES------CHHHHHT---TSCCSEEEEC
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCc-EEEEEecCCHHHHHHHHHHhCCCcccC------CHHHHhc---CCCCCEEEEe
Confidence 47899999999988777776 43 66 54 456888887754 45678754432 2222222 1279999999
Q ss_pred CCChHHHHHHHHHhhcc
Q 022865 272 IGNVSVMRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~ 288 (291)
+++......+.++++.|
T Consensus 79 tp~~~h~~~~~~al~~G 95 (346)
T 3cea_A 79 APTPFHPEMTIYAMNAG 95 (346)
T ss_dssp SCGGGHHHHHHHHHHTT
T ss_pred CChHhHHHHHHHHHHCC
Confidence 99988888888888764
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.011 Score=51.35 Aligned_cols=80 Identities=20% Similarity=0.244 Sum_probs=51.2
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~--vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |. +|.+.++.+...|+ +|+.++++++..+.+ .+.+....+..+- +..++.+.+.+.. .+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5789999987 55 99999988888999 899998886544333 2334323332221 1233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 109 ~iD~lVnnAG~ 119 (293)
T 3grk_A 109 KLDFLVHAIGF 119 (293)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999884
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.011 Score=54.82 Aligned_cols=95 Identities=21% Similarity=0.276 Sum_probs=62.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHc-CC--CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccE
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAA-GA--SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~--~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
++....+|||+|+|++|..++.++... +. ..|+.++..++++++.+..|.. .....-+..+..+.+..+..++ |+
T Consensus 9 ~~~~~~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~g~~-~~~~~Vdadnv~~~l~aLl~~~-Dv 86 (480)
T 2ph5_A 9 KILFKNRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQYGVS-FKLQQITPQNYLEVIGSTLEEN-DF 86 (480)
T ss_dssp CBCCCSCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHHTCE-EEECCCCTTTHHHHTGGGCCTT-CE
T ss_pred eecCCCCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhcCCc-eeEEeccchhHHHHHHHHhcCC-CE
Confidence 345566899999999999988777654 44 3788888877766666666753 3222222244545566666554 99
Q ss_pred EEEcCCChHHHHHHHHHhhc
Q 022865 268 SFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 268 v~d~~g~~~~~~~~~~~l~~ 287 (291)
|+|.+-....+..+-.|++.
T Consensus 87 VIN~s~~~~~l~Im~aclea 106 (480)
T 2ph5_A 87 LIDVSIGISSLALIILCNQK 106 (480)
T ss_dssp EEECCSSSCHHHHHHHHHHH
T ss_pred EEECCccccCHHHHHHHHHc
Confidence 99987665555555555543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.38 E-value=0.0067 Score=51.19 Aligned_cols=74 Identities=26% Similarity=0.272 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
+++++||+|+ |++|...++.+...|+ +|++++++++. ++.+. ..+ |..+ ..++.+.+.+.. .+++|++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~-~V~~~~r~~~~----~~~~~-~~~~~D~~d-~~~~~~~~~~~~~~~g~id~l 78 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGA-KVTGFDQAFTQ----EQYPF-ATEVMDVAD-AAQVAQVCQRLLAETERLDAL 78 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCCCS----SCCSS-EEEECCTTC-HHHHHHHHHHHHHHCSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCchhh----hcCCc-eEEEcCCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999988 9999999998888999 89998887653 22332 222 2222 233333343322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 79 v~~Ag~ 84 (250)
T 2fwm_X 79 VNAAGI 84 (250)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999884
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.37 E-value=0.0016 Score=54.50 Aligned_cols=95 Identities=20% Similarity=0.170 Sum_probs=65.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEE-eCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF-VNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~-i~~~~~~~~~~~~v~~~ 260 (291)
+.....+.++++||-+|+| .|..+..+++..+ .+|++++.+++..+.+++ .+.+.+ +...+ . ...+
T Consensus 83 ~~~~l~~~~~~~vLdiG~G-~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d----~---~~~~ 153 (235)
T 1jg1_A 83 MLEIANLKPGMNILEVGTG-SGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGD----G---SKGF 153 (235)
T ss_dssp HHHHHTCCTTCCEEEECCT-TSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESC----G---GGCC
T ss_pred HHHhcCCCCCCEEEEEeCC-cCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECC----c---ccCC
Confidence 3345567889999999998 6899999999887 499999999998877765 343221 11111 1 1111
Q ss_pred cCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 261 TDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 261 ~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
... +||+|+.+..-......+.+.|+++|
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~~~~~~~L~pgG 183 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIPEPLIEQLKIGG 183 (235)
T ss_dssp GGGCCEEEEEECSBBSSCCHHHHHTEEEEE
T ss_pred CCCCCccEEEECCcHHHHHHHHHHhcCCCc
Confidence 122 59999987665555677888899883
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.016 Score=50.61 Aligned_cols=91 Identities=14% Similarity=0.247 Sum_probs=64.9
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCE---EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE---FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~---~i~~~~~~~~~~~~v~ 258 (291)
+.....+.++.+||-+|+|. |..+..+++..|+ +|+++|.+++.++.+++. +... ++..+ +.
T Consensus 82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d---------~~ 150 (318)
T 2fk8_A 82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQG---------WE 150 (318)
T ss_dssp HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESC---------GG
T ss_pred HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC---------hH
Confidence 44556778999999999977 8888899988888 999999999988888653 3221 11111 11
Q ss_pred hhcCCCccEEEEc-----CCC---hHHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFEC-----IGN---VSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~-----~g~---~~~~~~~~~~l~~~ 288 (291)
++ .+.||+|+.. ++. ...+..+.+.|+++
T Consensus 151 ~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 187 (318)
T 2fk8_A 151 DF-AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPAD 187 (318)
T ss_dssp GC-CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTT
T ss_pred HC-CCCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCC
Confidence 12 2579999876 432 45677888889998
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.009 Score=51.11 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++ ++++++.+ ++.+.... + |..+ ..++.+.+.+.. .
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQ-ESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHHc
Confidence 4688999987 9999999988888999 8887766 55444333 33343332 2 2222 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 105 g~id~lv~nAg~ 116 (269)
T 4dmm_A 105 GRLDVLVNNAGI 116 (269)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0034 Score=53.14 Aligned_cols=96 Identities=18% Similarity=0.204 Sum_probs=63.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcC-CC
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD-GG 264 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~-gg 264 (291)
...++.+||-+|+|. |..++.+++.++ ..+|+++|.+++.++.+++. |....+.... .+..+.+..+.. +.
T Consensus 60 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~--~d~~~~l~~~~~~~~ 136 (248)
T 3tfw_A 60 RLTQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLRE--GPALQSLESLGECPA 136 (248)
T ss_dssp HHHTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHTCCSCCC
T ss_pred hhcCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHhcCCCCC
Confidence 456788999999876 888889998874 44999999999988877653 4431111111 223334444433 27
Q ss_pred ccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
||+||-.... ...++.+.+.|+++|
T Consensus 137 fD~V~~d~~~~~~~~~l~~~~~~LkpGG 164 (248)
T 3tfw_A 137 FDLIFIDADKPNNPHYLRWALRYSRPGT 164 (248)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTCCTTC
T ss_pred eEEEEECCchHHHHHHHHHHHHhcCCCe
Confidence 9998843332 356888888999983
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.013 Score=50.10 Aligned_cols=80 Identities=20% Similarity=0.287 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHH----HhcCCCEE-eCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRA----KNFGVTEF-VNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~----~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++. .++++.+ ++.+.... +..+- +.+++.+.+.+.. .+
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG 108 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 5689999987 9999999988888999 78877444 4443332 33454332 22221 1233333343322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 109 ~iD~lvnnAg~ 119 (271)
T 3v2g_A 109 GLDILVNSAGI 119 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCcEEEECCCC
Confidence 79999999884
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.016 Score=48.68 Aligned_cols=76 Identities=14% Similarity=0.045 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-c--CChhhHHHHH-hc-CCCEEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-D--IDPKKFDRAK-NF-GVTEFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~--~~~~~~~~~~-~~-ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
++++||+|+ |++|...++.+...|+ +|+.+ + +++++++.+. ++ +. .+.+..+ -..+.+.+.+.. +++|++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~-v~~~~~~~~~~~-g~iD~l 76 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGY-TVVCHDASFADAAERQRFESENPGT-IALAEQK-PERLVDATLQHG-EAIDTI 76 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHSTTE-EECCCCC-GGGHHHHHGGGS-SCEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEecCCcCCHHHHHHHHHHhCCC-cccCHHH-HHHHHHHHHHHc-CCCCEE
Confidence 367899987 9999999988888999 89998 6 8887765543 44 32 2322221 123333333322 479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 77 v~~Ag~ 82 (244)
T 1zmo_A 77 VSNDYI 82 (244)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999883
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=96.34 E-value=0.012 Score=48.29 Aligned_cols=69 Identities=28% Similarity=0.384 Sum_probs=48.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|||+|+ |.+|...+..+...|. +|+++++++++.+.+..-+...+. |..+ .+. + .+ +++|+||+++|.
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~D~~d--~~~-~---~~--~~~d~vi~~ag~ 72 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGH-EVLAVVRDPQKAADRLGATVATLVKEPLV--LTE-A---DL--DSVDAVVDALSV 72 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHTCTTSEEEECCGGG--CCH-H---HH--TTCSEEEECCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCC-EEEEEEecccccccccCCCceEEeccccc--ccH-h---hc--ccCCEEEECCcc
Confidence 5899998 9999999999888898 999999998887655433443221 2222 111 1 11 369999999986
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.0092 Score=52.44 Aligned_cols=80 Identities=25% Similarity=0.248 Sum_probs=50.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC----------hhhHHH----HHhcCCCEEe-CCCC-CCchHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID----------PKKFDR----AKNFGVTEFV-NPKD-HDKPIQQV 256 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~----------~~~~~~----~~~~ga~~~i-~~~~-~~~~~~~~ 256 (291)
.++++||+|+ +++|.+.+..+...|+ +|++++++ .++++. +++.+....+ ..+- +..++.+.
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 5688999987 9999999888888899 99998876 333322 2334443322 1111 12233333
Q ss_pred HHhhc--CCCccEEEEcCCC
Q 022865 257 LVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 257 v~~~~--~gg~d~v~d~~g~ 274 (291)
+.+.. .+++|++|++.|.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHcCCCCEEEECCCC
Confidence 33322 2479999999984
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.33 E-value=0.032 Score=45.97 Aligned_cols=77 Identities=16% Similarity=0.104 Sum_probs=55.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|+|+|+|.+|...++.+...|. .|++++.++++.+.+. +++.. ++..+..+ .+.+.+..-..+|+|+-++++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~l~~~~~~~-~i~gd~~~---~~~l~~a~i~~ad~vi~~~~~d 76 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKY-GVVIINKDRELCEEFAKKLKAT-IIHGDGSH---KEILRDAEVSKNDVVVILTPRD 76 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHHSSSE-EEESCTTS---HHHHHHHTCCTTCEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHcCCe-EEEcCCCC---HHHHHhcCcccCCEEEEecCCc
Confidence 48899999999999999999999 8999999999887654 45653 33322211 2334443223799999999987
Q ss_pred HHH
Q 022865 276 SVM 278 (291)
Q Consensus 276 ~~~ 278 (291)
..-
T Consensus 77 ~~n 79 (218)
T 3l4b_C 77 EVN 79 (218)
T ss_dssp HHH
T ss_pred HHH
Confidence 643
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.33 E-value=0.014 Score=50.07 Aligned_cols=79 Identities=23% Similarity=0.300 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-------------ChhhHHHH----HhcCCCEE-e--CCCCCCch
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-------------DPKKFDRA----KNFGVTEF-V--NPKDHDKP 252 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-------------~~~~~~~~----~~~ga~~~-i--~~~~~~~~ 252 (291)
.++++||+|+ +++|.+.++.+...|+ +|+++++ +.++++.+ ++.+.... + |..+ ..+
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD-FDR 87 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC-HHH
Confidence 5689999987 9999999988889999 8999877 44444332 23343322 2 2222 233
Q ss_pred HHHHHHhhc--CCCccEEEEcCCC
Q 022865 253 IQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 253 ~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
+.+.+.+.. .+++|++|++.|.
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 333333322 1479999999884
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0088 Score=50.99 Aligned_cols=73 Identities=18% Similarity=0.273 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++ .-.. ..+ |..+ ..++.+.+.+.. .+++|++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~-----~~~~-~~~~~Dl~~-~~~v~~~~~~~~~~~g~iD~l 78 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGS-KVIDLSIHDPG-----EAKY-DHIECDVTN-PDQVKASIDHIFKEYGSISVL 78 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSCCC-----SCSS-EEEECCTTC-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEecCccc-----CCce-EEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 4678999987 9999999988888999 89998887664 1111 222 2222 233333333322 1379999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 79 v~~Ag~ 84 (264)
T 2dtx_A 79 VNNAGI 84 (264)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0095 Score=50.30 Aligned_cols=73 Identities=19% Similarity=0.191 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC--CCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~--gg~d~v~d 270 (291)
-++++||+|+ |++|...++.+...|+ +|+++++++++.+. ....++.. +..++.+.+.+... +++|++|+
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~-----~~~~~d~~-d~~~v~~~~~~~~~~~g~iD~li~ 93 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSW-NTISIDFRENPNAD-----HSFTIKDS-GEEEIKSVIEKINSKSIKVDTFVC 93 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCTTSS-----EEEECSCS-SHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCcccccc-----cceEEEeC-CHHHHHHHHHHHHHHcCCCCEEEE
Confidence 3678999988 9999999998888999 89999888775321 11122222 22344444444332 37999999
Q ss_pred cCC
Q 022865 271 CIG 273 (291)
Q Consensus 271 ~~g 273 (291)
++|
T Consensus 94 ~Ag 96 (251)
T 3orf_A 94 AAG 96 (251)
T ss_dssp CCC
T ss_pred CCc
Confidence 988
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0025 Score=51.93 Aligned_cols=124 Identities=18% Similarity=0.190 Sum_probs=68.8
Q ss_pred ceeeeEE-ecccceEEcCCCCChhhhhhhcccchhhhhhhhhhc--CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEE
Q 022865 148 TFSQYTV-VHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWNTA--KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 224 (291)
Q Consensus 148 ~~~~~~~-~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~ 224 (291)
.|.+|.. .+.+..+.+++.+++.....- .+. . +.... .+.++.+||-+|+|. |..+..+++ .+..+|++
T Consensus 17 ~w~~~~~~~~~~~~~~~~~~~~f~~~~~~----~~~-~-~~~~l~~~~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~ 88 (205)
T 3grz_A 17 EWEDYQPVFKDQEIIRLDPGLAFGTGNHQ----TTQ-L-AMLGIERAMVKPLTVADVGTGS-GILAIAAHK-LGAKSVLA 88 (205)
T ss_dssp TTCCCCCSSTTCEEEEESCC-----CCHH----HHH-H-HHHHHHHHCSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEE
T ss_pred cccccccCCCCceeEEecCCcccCCCCCc----cHH-H-HHHHHHHhccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEE
Confidence 4566666 566777888877755543211 111 0 11111 256788999999876 777777776 46669999
Q ss_pred EcCChhhHHHHHhc----CCC--EEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChH---HHHHHHHHhhcc
Q 022865 225 IDIDPKKFDRAKNF----GVT--EFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS---VMRAALECCHKV 288 (291)
Q Consensus 225 ~~~~~~~~~~~~~~----ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~---~~~~~~~~l~~~ 288 (291)
+|.+++.++.+++. +.. .++..+. .+...+.+|+|+....-.. .++.+.+.|+++
T Consensus 89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~---------~~~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~g 152 (205)
T 3grz_A 89 TDISDESMTAAEENAALNGIYDIALQKTSL---------LADVDGKFDLIVANILAEILLDLIPQLDSHLNED 152 (205)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCCEEEESST---------TTTCCSCEEEEEEESCHHHHHHHGGGSGGGEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEeccc---------cccCCCCceEEEECCcHHHHHHHHHHHHHhcCCC
Confidence 99999988877653 432 2222211 1112347998887644322 233334445555
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0052 Score=50.34 Aligned_cols=94 Identities=16% Similarity=0.202 Sum_probs=64.8
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc----CCCE--EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----GVTE--FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~----ga~~--~i~~~~~~~~~~~~v~ 258 (291)
+.....+.++++||.+|+|. |..+..+++..+. .+|++++.+++.++.+++. +.+. ++..+ .. .
T Consensus 69 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d-----~~---~ 139 (215)
T 2yxe_A 69 MCELLDLKPGMKVLEIGTGC-GYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD-----GT---L 139 (215)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC-----GG---G
T ss_pred HHHhhCCCCCCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC-----cc---c
Confidence 34555678899999999984 8899999998862 3999999999988877653 3322 11111 10 0
Q ss_pred hhc-CCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 259 DLT-DGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~-~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
... .+.||+|+....-......+.+.|+++
T Consensus 140 ~~~~~~~fD~v~~~~~~~~~~~~~~~~L~pg 170 (215)
T 2yxe_A 140 GYEPLAPYDRIYTTAAGPKIPEPLIRQLKDG 170 (215)
T ss_dssp CCGGGCCEEEEEESSBBSSCCHHHHHTEEEE
T ss_pred CCCCCCCeeEEEECCchHHHHHHHHHHcCCC
Confidence 111 247999998766555557888889888
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0047 Score=51.13 Aligned_cols=97 Identities=15% Similarity=0.150 Sum_probs=63.2
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcC--
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD-- 262 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~-- 262 (291)
....++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++. |....+.... .+..+.+..+..
T Consensus 65 ~~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~~~~~~~~~ 141 (229)
T 2avd_A 65 ARLIQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLAAG 141 (229)
T ss_dssp HHHTTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEE--cCHHHHHHHHHhcC
Confidence 345677899999987 5888899998764 34999999999988877643 4321111111 122333333321
Q ss_pred --CCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 263 --GGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 263 --gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
+.||+||-.... ...++.+.+.|+++|
T Consensus 142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG 173 (229)
T 2avd_A 142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGG 173 (229)
T ss_dssp CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEE
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHHcCCCe
Confidence 479988865433 356888889999883
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.018 Score=49.88 Aligned_cols=80 Identities=20% Similarity=0.182 Sum_probs=50.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHH----HHhcCCCEEeCCCC-CC-chHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP--KKFDR----AKNFGVTEFVNPKD-HD-KPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~----~~~~ga~~~i~~~~-~~-~~~~~~v~~~~--~ 262 (291)
+++++||+|+ +++|...+..+...|+ +|+.++++. ++.+. .++.+....+...+ .+ .++.+.+.+.. .
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 5789999987 9999999988888999 888887763 22222 23445433322111 11 23333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 127 g~iD~lv~nAg~ 138 (294)
T 3r3s_A 127 GGLDILALVAGK 138 (294)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.022 Score=52.96 Aligned_cols=75 Identities=20% Similarity=0.166 Sum_probs=50.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHh-cCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKN-FGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~-~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+.+|+|+|+|.+|..++..+... +. +|++++++.++.+.+.+ .+... .++..+ ..++.+.+ . ++|+||+|
T Consensus 23 ~k~VlIiGAGgiG~aia~~L~~~~g~-~V~v~~R~~~ka~~la~~~~~~~~~~D~~d-~~~l~~~l----~-~~DvVIn~ 95 (467)
T 2axq_A 23 GKNVLLLGSGFVAQPVIDTLAANDDI-NVTVACRTLANAQALAKPSGSKAISLDVTD-DSALDKVL----A-DNDVVISL 95 (467)
T ss_dssp CEEEEEECCSTTHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHGGGTCEEEECCTTC-HHHHHHHH----H-TSSEEEEC
T ss_pred CCEEEEECChHHHHHHHHHHHhCCCC-eEEEEECCHHHHHHHHHhcCCcEEEEecCC-HHHHHHHH----c-CCCEEEEC
Confidence 46899999999999988888777 66 89999999888765543 33322 122222 11222222 1 59999999
Q ss_pred CCChH
Q 022865 272 IGNVS 276 (291)
Q Consensus 272 ~g~~~ 276 (291)
++...
T Consensus 96 tp~~~ 100 (467)
T 2axq_A 96 IPYTF 100 (467)
T ss_dssp SCGGG
T ss_pred Cchhh
Confidence 99653
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0097 Score=51.23 Aligned_cols=79 Identities=20% Similarity=0.238 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |.+|...+..+...|+ +|+++++++++++.+. +.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d-~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCC-HHHHHHHHHHHHHhcC
Confidence 3578999988 9999998888888898 8888888877654432 224332 22 2222 233333343322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 121 ~id~li~~Ag~ 131 (285)
T 2c07_A 121 NVDILVNNAGI 131 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999874
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=96.29 E-value=0.0053 Score=52.59 Aligned_cols=76 Identities=21% Similarity=0.326 Sum_probs=49.7
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
-.+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.. +....+ |..+ ..++.+.+.+.. .+++|
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 83 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGA-KVVSVSLDEKSDV-----NVSDHFKIDVTN-EEEVKEAVEKTTKKYGRID 83 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCC--CT-----TSSEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhcc-----CceeEEEecCCC-HHHHHHHHHHHHHHcCCCC
Confidence 356889999987 9999999988888999 8999988876531 111222 3222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
++|++.|.
T Consensus 84 ~lv~nAg~ 91 (269)
T 3vtz_A 84 ILVNNAGI 91 (269)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 99999884
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.29 E-value=0.013 Score=51.74 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHHH-----hcCCCE-E--eCCCCCCc------------
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRAK-----NFGVTE-F--VNPKDHDK------------ 251 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~~-----~~ga~~-~--i~~~~~~~------------ 251 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.++ +++++++.+. +.+... . .|..+ ..
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~~~~ 122 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSN-VATAPVSGADGSAP 122 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSS-SCBCC-------CC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCC-chhccccccccccc
Confidence 4678999987 9999999998888999 899998 8877665442 223322 2 23322 22
Q ss_pred -----hHHHHHHhhc--CCCccEEEEcCCC
Q 022865 252 -----PIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 252 -----~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
++.+.+.+.. .+++|++|+++|.
T Consensus 123 ~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~ 152 (328)
T 2qhx_A 123 VTLFTRCAELVAACYTHWGRCDVLVNNASS 152 (328)
T ss_dssp BCHHHHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred cccHHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4444444322 2479999999884
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=96.28 E-value=0.022 Score=47.43 Aligned_cols=73 Identities=16% Similarity=0.094 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
.+.+|||+|+ |.+|...++.+... |+ +|+++++++++.+.+ .-+...+ .|..+ . +.+.++.. ++|+||
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~-~V~~~~r~~~~~~~~-~~~~~~~~~D~~d--~---~~~~~~~~-~~d~vi 74 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKF-VAKGLVRSAQGKEKI-GGEADVFIGDITD--A---DSINPAFQ-GIDALV 74 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTC-EEEEEESCHHHHHHT-TCCTTEEECCTTS--H---HHHHHHHT-TCSEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCc-EEEEEEcCCCchhhc-CCCeeEEEecCCC--H---HHHHHHHc-CCCEEE
Confidence 3578999987 99999999888888 67 899999988765433 1122222 12221 2 23333332 589999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
+++|.
T Consensus 75 ~~a~~ 79 (253)
T 1xq6_A 75 ILTSA 79 (253)
T ss_dssp ECCCC
T ss_pred Eeccc
Confidence 99873
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.25 E-value=0.033 Score=48.00 Aligned_cols=44 Identities=27% Similarity=0.402 Sum_probs=38.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 45 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGC-SVTIWNRSPEKAEELAALGA 45 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTC
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 478999999999998888888898 89999999999888777665
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=96.24 E-value=0.01 Score=51.09 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-H----hcCCCE-Ee--CCCCC---CchHHHHHHhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA-K----NFGVTE-FV--NPKDH---DKPIQQVLVDL 260 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~-~----~~ga~~-~i--~~~~~---~~~~~~~v~~~ 260 (291)
.++++||+|+ |++|.+.++.+...|+ +|+.+++++ ++++.+ . +.+... .+ |..+. ..++.+.+.+.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 4678999987 9999999988888899 899988887 654333 2 234322 22 22210 12333333332
Q ss_pred c--CCCccEEEEcCCC
Q 022865 261 T--DGGVDYSFECIGN 274 (291)
Q Consensus 261 ~--~gg~d~v~d~~g~ 274 (291)
. .+++|++|++.|.
T Consensus 101 ~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 2 2479999999883
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=96.23 E-value=0.04 Score=46.72 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=30.4
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+.+|+|+|+|++|..++..+..+|..+++.+|.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4689999999999999999999999899998764
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.0092 Score=50.51 Aligned_cols=79 Identities=11% Similarity=0.177 Sum_probs=50.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHH-hc-----CCCE-Ee--CCCCCCchHHHHHHhh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKA---AGASRVIGIDIDPKKFDRAK-NF-----GVTE-FV--NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~---~g~~~v~~~~~~~~~~~~~~-~~-----ga~~-~i--~~~~~~~~~~~~v~~~ 260 (291)
+++++||+|+ |++|...+..+.. .|+ +|+.+++++++++.+. ++ +... .+ |..+ ..++.+.+.+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~ 82 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGT-EAGVQRLLSAV 82 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTS-HHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCC-HHHHHHHHHHH
Confidence 3568899987 9999998877766 798 8999999987765442 22 3222 22 2222 23344444443
Q ss_pred c----CCCcc--EEEEcCCC
Q 022865 261 T----DGGVD--YSFECIGN 274 (291)
Q Consensus 261 ~----~gg~d--~v~d~~g~ 274 (291)
. .+++| ++|++.|.
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCC
T ss_pred HhccccccCCccEEEECCcc
Confidence 2 24678 99999873
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.018 Score=48.82 Aligned_cols=80 Identities=15% Similarity=0.176 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+ ++++++.+.+ ++.+... .+..+- +..++.+.+.+.. .+
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4689999987 9999999988888899 78777 5555544333 2334322 222221 1233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 86 ~id~lv~nAg~ 96 (259)
T 3edm_A 86 EIHGLVHVAGG 96 (259)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 79999999873
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.19 E-value=0.017 Score=48.96 Aligned_cols=82 Identities=21% Similarity=0.255 Sum_probs=52.0
Q ss_pred CCCCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeCCCC-CCchHHHHHHhhc--
Q 022865 192 VEPGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKD-HDKPIQQVLVDLT-- 261 (291)
Q Consensus 192 ~~~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~~~~-~~~~~~~~v~~~~-- 261 (291)
..+++++||+|+ +++|...++.+...|+ +|+.+++++...+.+ .+.+.-..+..+- +..++.+.+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 456789999974 6999998888888899 899998876544333 2334323332222 1233333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 90 ~g~id~lv~nAg~ 102 (271)
T 3ek2_A 90 WDSLDGLVHSIGF 102 (271)
T ss_dssp CSCEEEEEECCCC
T ss_pred cCCCCEEEECCcc
Confidence 2479999999874
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=96.18 E-value=0.015 Score=50.21 Aligned_cols=74 Identities=20% Similarity=0.233 Sum_probs=49.8
Q ss_pred CCCCEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc----CCCE-EeCCCCCCchHHHHHHhhcCCCc
Q 022865 193 EPGSIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF----GVTE-FVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G-~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~----ga~~-~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
-+++++||+| +|++|.+++..+...|+ +|+.+++++++.+.+ +++ +... ..+..+ . +.+.+... .+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~-~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~--~---~~~~~~~~-~~ 189 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD--D---ASRAEAVK-GA 189 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS--H---HHHHHHTT-TC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCC--H---HHHHHHHH-hC
Confidence 3678999999 59999999999999999 799999988776543 232 2221 123222 1 12333222 48
Q ss_pred cEEEEcCC
Q 022865 266 DYSFECIG 273 (291)
Q Consensus 266 d~v~d~~g 273 (291)
|++++++|
T Consensus 190 DvlVn~ag 197 (287)
T 1lu9_A 190 HFVFTAGA 197 (287)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999997
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.0069 Score=51.37 Aligned_cols=73 Identities=22% Similarity=0.213 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++++++++. + ..+ |..+ ..++.+.+.+.. .+++|++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~-----~-~~~~~Dl~d-~~~v~~~~~~~~~~~g~iD~l 91 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGD-KVAITYRSGEPPEG-----F-LAVKCDITD-TEQVEQAYKEIEETHGPVEVL 91 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTT-----S-EEEECCTTS-HHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHhhcc-----c-eEEEecCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 3678999988 9999999988888999 89998887765431 1 222 2222 233333333322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 92 v~nAg~ 97 (253)
T 2nm0_A 92 IANAGV 97 (253)
T ss_dssp EEECSC
T ss_pred EECCCC
Confidence 999874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=96.18 E-value=0.012 Score=50.22 Aligned_cols=80 Identities=21% Similarity=0.247 Sum_probs=49.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHH----HHhcCCCEE-eCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDR----AKNFGVTEF-VNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~----~~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++ ++++++. +++.+.... +..+- +..++.+.+.+.. .+
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 5688999987 9999999988889999 7877655 4443332 233454332 22221 1233333343322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 96 ~id~lvnnAg~ 106 (270)
T 3is3_A 96 HLDIAVSNSGV 106 (270)
T ss_dssp CCCEEECCCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=96.17 E-value=0.0087 Score=50.67 Aligned_cols=77 Identities=23% Similarity=0.374 Sum_probs=48.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-Ee--CCCCCCchHHHHHHhhc-CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FV--NPKDHDKPIQQVLVDLT-DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-~i--~~~~~~~~~~~~v~~~~-~gg~d~v 268 (291)
.++++||+|+ +++|...++.+...|+ +|+.+++..++ ..++++... .+ |..+ ..++.+.+.... .+++|++
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~--~~~~~~~~~~~~~~D~~~-~~~v~~~~~~~~~~g~id~l 83 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGA-QVVVLDIRGED--VVADLGDRARFAAADVTD-EAAVASALDLAETMGTLRIV 83 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCHH--HHHHTCTTEEEEECCTTC-HHHHHHHHHHHHHHSCEEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCchHH--HHHhcCCceEEEECCCCC-HHHHHHHHHHHHHhCCCCEE
Confidence 4678999987 9999998888888899 89888875543 334455433 22 2222 222322222211 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
+++.|.
T Consensus 84 v~nAg~ 89 (257)
T 3tl3_A 84 VNCAGT 89 (257)
T ss_dssp EECGGG
T ss_pred EECCCC
Confidence 999984
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0042 Score=52.22 Aligned_cols=79 Identities=15% Similarity=0.159 Sum_probs=46.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
.++++||+|+ |++|...++.+.. |. +|+++++++++++.+.+......+..+-.+....+.+.+.. .+++|++|+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~ 81 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DH-IVYALGRNPEHLAALAEIEGVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVH 81 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TS-EEEEEESCHHHHHHHHTSTTEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHhhcCCcceecccchHHHHHHHHHHHHhcCCCCEEEE
Confidence 3678999988 9999987776644 77 89999999988877766432222222110000001111111 137999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 82 ~Ag~ 85 (245)
T 3e9n_A 82 AAAV 85 (245)
T ss_dssp CC--
T ss_pred CCCc
Confidence 9884
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0051 Score=51.35 Aligned_cols=87 Identities=10% Similarity=0.155 Sum_probs=53.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
++|||+|+ |.+|...++.+...| + +|+++++++++++.+..-++ .++..+-.+. +.+.+... ++|+||++.+
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~-~V~~~~R~~~~~~~~~~~~~-~~~~~Dl~d~---~~~~~~~~-~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTI-KQTLFARQPAKIHKPYPTNS-QIIMGDVLNH---AALKQAMQ-GQDIVYANLT 97 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTE-EEEEEESSGGGSCSSCCTTE-EEEECCTTCH---HHHHHHHT-TCSEEEEECC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCc-eEEEEEcChhhhcccccCCc-EEEEecCCCH---HHHHHHhc-CCCEEEEcCC
Confidence 57999997 999999999888888 7 89999998876543222122 1222211112 22333322 5899999988
Q ss_pred ChHH---HHHHHHHhhcc
Q 022865 274 NVSV---MRAALECCHKV 288 (291)
Q Consensus 274 ~~~~---~~~~~~~l~~~ 288 (291)
.... .+.+++.++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~ 115 (236)
T 3qvo_A 98 GEDLDIQANSVIAAMKAC 115 (236)
T ss_dssp STTHHHHHHHHHHHHHHT
T ss_pred CCchhHHHHHHHHHHHHc
Confidence 6432 33445555443
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0034 Score=51.29 Aligned_cols=93 Identities=14% Similarity=0.029 Sum_probs=63.4
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~~ 259 (291)
+.....++++++||-+|+|. |..+..+++. +. +|+++|.+++.++.+++ .+.+. ++..+. . +..
T Consensus 69 ~~~~l~~~~~~~vLdiG~G~-G~~~~~la~~-~~-~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~--~---~~~-- 138 (210)
T 3lbf_A 69 MTELLELTPQSRVLEIGTGS-GYQTAILAHL-VQ-HVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDG--W---QGW-- 138 (210)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG--G---GCC--
T ss_pred HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEecCHHHHHHHHHHHHHcCCCceEEEECCc--c---cCC--
Confidence 34556778999999999984 8888888888 65 99999999998887764 24321 221111 0 000
Q ss_pred hcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
...+.||+|+....-......+.+.|+++
T Consensus 139 ~~~~~~D~i~~~~~~~~~~~~~~~~L~pg 167 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIPTALMTQLDEG 167 (210)
T ss_dssp GGGCCEEEEEESSBCSSCCTHHHHTEEEE
T ss_pred ccCCCccEEEEccchhhhhHHHHHhcccC
Confidence 11247999998766555556778888888
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0086 Score=48.29 Aligned_cols=73 Identities=21% Similarity=0.215 Sum_probs=47.5
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|+|+|+ |.+|...++.+...|. +|+++++++++.+....-+. ..+..+-.+. +.+.+... ++|+||+++|.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~D~~~~---~~~~~~~~-~~d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPA-HVVVGDVLQA---ADVDKTVA-GQDAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCS-EEEESCTTSH---HHHHHHHT-TCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCC-eEEEEEeChhhcccccCCce-EEEEecCCCH---HHHHHHHc-CCCEEEECccC
Confidence 68999998 9999999988888898 99999998876432111122 2222221112 22333322 58999999885
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.0068 Score=52.51 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=37.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~g 239 (291)
.+++++|+|+|++|.+++..+...|+.+|++++++.++.+.+ ++++
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~ 171 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA 171 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh
Confidence 578999999999999999888889987999999998875443 4443
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.016 Score=49.58 Aligned_cols=79 Identities=18% Similarity=0.232 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+ .+++++.+.+ ++.+.... + |..+ ..++.+.+.+.. .
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF-TVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSD-PAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC-EEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCC-HHHHHHHHHHHHHHc
Confidence 5789999987 9999998888888899 77776 4555444333 33443332 2 2222 223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 104 g~iD~lvnnAG~ 115 (267)
T 3u5t_A 104 GGVDVLVNNAGI 115 (267)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=96.12 E-value=0.013 Score=49.02 Aligned_cols=79 Identities=19% Similarity=0.236 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...++.+...|+ +|+++ .+++++++.+ ++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKN-PEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTS-HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHHhc
Confidence 4678999987 9999999988888999 88888 5555544332 2234332 22 2222 223333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 82 ~~~d~vi~~Ag~ 93 (247)
T 2hq1_A 82 GRIDILVNNAGI 93 (247)
T ss_dssp SCCCEEEECC--
T ss_pred CCCCEEEECCCC
Confidence 379999999884
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.021 Score=49.96 Aligned_cols=45 Identities=31% Similarity=0.532 Sum_probs=39.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|.+|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+
T Consensus 141 ~g~~vgIiG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~-~~~~~~g~ 185 (307)
T 1wwk_A 141 EGKTIGIIGFGRIGYQVAKIANALGM-NILLYDPYPNE-ERAKEVNG 185 (307)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHTTC
T ss_pred CCceEEEEccCHHHHHHHHHHHHCCC-EEEEECCCCCh-hhHhhcCc
Confidence 57799999999999999999999999 99999988876 45566665
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.022 Score=48.14 Aligned_cols=77 Identities=16% Similarity=0.183 Sum_probs=48.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-hhhHHHHHhc----CCCE-Ee--CCCCCCchHHHHHHhhcC--C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-PKKFDRAKNF----GVTE-FV--NPKDHDKPIQQVLVDLTD--G 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-~~~~~~~~~~----ga~~-~i--~~~~~~~~~~~~v~~~~~--g 263 (291)
++++||+|+ +++|...++.+...|+ +|+.++++ ++..+.+.+. +... .+ |..+ ..++.+.+.+... +
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKGY-SVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTK-KEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTS-HHHHHHHHHHHHHHHS
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHhC
Confidence 578999987 9999999988888899 78887554 4444444322 2221 22 2222 2333333433321 3
Q ss_pred CccEEEEcCC
Q 022865 264 GVDYSFECIG 273 (291)
Q Consensus 264 g~d~v~d~~g 273 (291)
++|++|+++|
T Consensus 85 ~id~lv~~Ag 94 (264)
T 3i4f_A 85 KIDFLINNAG 94 (264)
T ss_dssp CCCEEECCCC
T ss_pred CCCEEEECCc
Confidence 7999999999
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.013 Score=49.92 Aligned_cols=78 Identities=10% Similarity=0.167 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~---~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~- 261 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.+++.. ++++.+ ++.+.... + |..+ ..++.+.+.+..
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d-~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSN-EEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCS-HHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCC-HHHHHHHHHHHHH
Confidence 4689999987 9999998888888899 888876543 233222 22243222 2 2222 233333333322
Q ss_pred -CCCccEEEEcCC
Q 022865 262 -DGGVDYSFECIG 273 (291)
Q Consensus 262 -~gg~d~v~d~~g 273 (291)
.+++|++|++.|
T Consensus 88 ~~g~iD~lvnnAg 100 (262)
T 3ksu_A 88 EFGKVDIAINTVG 100 (262)
T ss_dssp HHCSEEEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 247999999998
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.015 Score=48.40 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=49.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hcCCCE-E-eCCCC-CCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-F-VNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~~----~~ga~~-~-i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++||+|+ |.+|...++.+...|+ +|+++ ++++++.+.+. +.+... . +..+- +..++.+.+.+.. -++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGF-ALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 57899988 9999999988888898 88887 78877655432 224322 2 22221 1223333333321 147
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|++.|.
T Consensus 81 ~d~li~~Ag~ 90 (245)
T 2ph3_A 81 LDTLVNNAGI 90 (245)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.05 E-value=0.013 Score=49.77 Aligned_cols=79 Identities=18% Similarity=0.248 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+++++||+|+ |.+|...+..+...|+ +|+++++ ++++++.+ ++.+... .+ |..+ ..++.+.+.+.. -
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISK-PSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4678999987 9999999988888898 8888887 66654432 2335432 22 2222 223333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 379999999873
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.05 E-value=0.025 Score=48.91 Aligned_cols=92 Identities=15% Similarity=0.226 Sum_probs=65.1
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCE-E-eCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE-F-VNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~-~-i~~~~~~~~~~~~v~~ 259 (291)
+.....++++.+||-+|+|. |..+..+++..|. +|+++|.+++.++.+++. +... + +...+ + .+
T Consensus 64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d----~----~~ 133 (302)
T 3hem_A 64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQG----W----EE 133 (302)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECC----G----GG
T ss_pred HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECC----H----HH
Confidence 45566788999999999986 8888999998886 999999999988877643 3321 1 11111 1 12
Q ss_pred hcCCCccEEEEcCC-----C----------hHHHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFECIG-----N----------VSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~~g-----~----------~~~~~~~~~~l~~~ 288 (291)
+ .+.||+|+.... . ...+..+.+.|+++
T Consensus 134 ~-~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lkpg 176 (302)
T 3hem_A 134 F-DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD 176 (302)
T ss_dssp C-CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTT
T ss_pred c-CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCC
Confidence 2 458999887422 1 35678888889998
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.015 Score=49.86 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=51.0
Q ss_pred CCCEEEEEcC-Ch--HHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHH-hcCCCEEeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GT--VGLAVAEGAKAAGASRVIGIDIDP--KKFDRAK-NFGVTEFVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~--vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~~~-~~ga~~~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+++++||+|+ |. +|...++.+...|+ +|+.+++++ ++++.+. +.+.-..+..+- +..++.+.+.+.. .++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 103 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGA-ELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG 103 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTC-EEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCC-EEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4688999985 44 99998888888999 899988877 5444443 333323332222 1233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++|+++|.
T Consensus 104 id~li~nAg~ 113 (280)
T 3nrc_A 104 LDAIVHSIAF 113 (280)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999884
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.03 Score=47.88 Aligned_cols=92 Identities=13% Similarity=0.151 Sum_probs=63.7
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCC-E-EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT-E-FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~-~-~i~~~~~~~~~~~~v~~ 259 (291)
+.....+.++.+||-+|+|. |..+..+++..|. +|++++.+++.++.+++. +.. . .+...+ + .+
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d----~----~~ 125 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG----W----EQ 125 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC----G----GG
T ss_pred HHHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECC----h----hh
Confidence 34556678899999999876 7788888877888 999999999988887653 321 1 111111 1 12
Q ss_pred hcCCCccEEEEc-----CC---ChHHHHHHHHHhhcc
Q 022865 260 LTDGGVDYSFEC-----IG---NVSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~~gg~d~v~d~-----~g---~~~~~~~~~~~l~~~ 288 (291)
+. +.||+|+.. .+ -...++.+.+.|+++
T Consensus 126 ~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 161 (287)
T 1kpg_A 126 FD-EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD 161 (287)
T ss_dssp CC-CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT
T ss_pred CC-CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCC
Confidence 22 579998865 32 245678888889998
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.026 Score=51.58 Aligned_cols=85 Identities=21% Similarity=0.220 Sum_probs=53.1
Q ss_pred hcCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhhH----------------HHHHhcCCCEE-eCCCC
Q 022865 189 TAKV-EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKKF----------------DRAKNFGVTEF-VNPKD 248 (291)
Q Consensus 189 ~~~~-~~g~~vlI~G~-g~vG~~ai~~a~~-~g~~~v~~~~~~~~~~----------------~~~~~~ga~~~-i~~~~ 248 (291)
...+ +.++++||+|+ +++|++.+..+.. .|+ +|++++++.+.. +.+++.|.... +..+-
T Consensus 54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA-~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dv 132 (422)
T 3s8m_A 54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGA-DTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDA 132 (422)
T ss_dssp TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred ccccccCCCEEEEECCChHHHHHHHHHHHHhCCC-EEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecC
Confidence 3445 35788999987 9999997777767 899 888887765321 34455665432 22221
Q ss_pred -CCchHH---HHHHhhcCCCccEEEEcCCC
Q 022865 249 -HDKPIQ---QVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 249 -~~~~~~---~~v~~~~~gg~d~v~d~~g~ 274 (291)
+.+... +.+.+..+|++|++++++|.
T Consensus 133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 133 FSDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp TSHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 122222 33333332689999999875
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.034 Score=47.18 Aligned_cols=80 Identities=16% Similarity=0.226 Sum_probs=50.5
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCCh---hhHHHHH-hcCCCEEeCCCC-CCchHHHHHHhhcC--C
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDP---KKFDRAK-NFGVTEFVNPKD-HDKPIQQVLVDLTD--G 263 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~---~~~~~~~-~~ga~~~i~~~~-~~~~~~~~v~~~~~--g 263 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++ +.++.+. +.+....+..+- +..++.+.+.+... +
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 86 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCC-EEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999975 6999999988888899 899988876 2333222 234323332221 12334444444332 3
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 87 ~iD~lv~~Ag~ 97 (265)
T 1qsg_A 87 KFDGFVHSIGF 97 (265)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.037 Score=48.31 Aligned_cols=44 Identities=25% Similarity=0.293 Sum_probs=39.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~l~~~g~ 65 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGF-KVTVWNRTLSKCDELVEHGA 65 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSGGGGHHHHHTTC
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCC
Confidence 579999999999998888888998 99999999999888877765
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.99 E-value=0.016 Score=48.93 Aligned_cols=79 Identities=20% Similarity=0.248 Sum_probs=49.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ |.+|...+..+...|+ +|++++++.++. +..+ +.+... .+ |..+ ..++.+.+.+.. .
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~~~ 90 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL 90 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-eEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCC-HHHHHHHHHHHHHhc
Confidence 4578999988 9999999988888898 899988855433 2222 234332 22 2222 233333443322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 91 ~~id~li~~Ag~ 102 (265)
T 1h5q_A 91 GPISGLIANAGV 102 (265)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 479999999884
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.019 Score=48.24 Aligned_cols=80 Identities=18% Similarity=0.199 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHH----HhcCCCEE-eCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRA----KNFGVTEF-VNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~----~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+.+++ ++++.+.+ ++.+.+.. +..+- +..++.+.+.+.. .+
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3578999987 9999999988889999 7877665 44444332 33444332 22221 1233333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 3osu_A 82 SLDVLVNNAGI 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=95.98 E-value=0.015 Score=49.10 Aligned_cols=78 Identities=18% Similarity=0.336 Sum_probs=49.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhhHHHHH-hcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKKFDRAK-NFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g--~~~v~~~~~~~~~~~~~~-~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
++++||+|+ +++|...++.+...| + +|+.+++++++++.+. +++... .+ |..+ ..++.+.+.+.. .+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 79 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDT-VVYGVARSEAPLKKLKEKYGDRFFYVVGDITE-DSVLKQLVNAAVKGHGKI 79 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSC-EEEEEESCHHHHHHHHHHHGGGEEEEESCTTS-HHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHHHHhCCceEEEECCCCC-HHHHHHHHHHHHHhcCCc
Confidence 578999987 999998876665554 5 8888989988766554 444322 22 2222 233333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 80 d~lvnnAg~ 88 (254)
T 3kzv_A 80 DSLVANAGV 88 (254)
T ss_dssp CEEEEECCC
T ss_pred cEEEECCcc
Confidence 999999884
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.023 Score=50.32 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=50.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHH-hcCCC--EEeCCCCCCchHHHHHHhhcCCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAK-NFGVT--EFVNPKDHDKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~-~~ga~--~~i~~~~~~~~~~~~v~~~~~gg~d~v 268 (291)
.+++|||+|+ |.+|...++.+... |..+|+++++++++.+.+. ++... ..+..+-.+. +.+.+... ++|+|
T Consensus 20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~---~~l~~~~~-~~D~V 95 (344)
T 2gn4_A 20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL---ERLNYALE-GVDIC 95 (344)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH---HHHHHHTT-TCSEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH---HHHHHHHh-cCCEE
Confidence 4679999987 99999988877777 8668999999888765543 33211 1222221112 23444332 69999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+++.
T Consensus 96 ih~Aa~ 101 (344)
T 2gn4_A 96 IHAAAL 101 (344)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999884
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.015 Score=54.17 Aligned_cols=82 Identities=26% Similarity=0.293 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. +. ++ .++. ...|+|+.++
T Consensus 275 L~GktVgIIG~G~IG~~vA~~l~~~G~-~V~v~d~~~~~~~~a~~~G~~-~~-------~l----~ell-~~aDiVi~~~ 340 (494)
T 3d64_A 275 IAGKIAVVAGYGDVGKGCAQSLRGLGA-TVWVTEIDPICALQAAMEGYR-VV-------TM----EYAA-DKADIFVTAT 340 (494)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSCHHHHHHHHTTTCE-EC-------CH----HHHT-TTCSEEEECS
T ss_pred cCCCEEEEEccCHHHHHHHHHHHHCCC-EEEEEeCChHhHHHHHHcCCE-eC-------CH----HHHH-hcCCEEEECC
Confidence 468899999999999999999999999 999999998775444445553 11 12 2222 2589999998
Q ss_pred CChHHH-HHHHHHhhcc
Q 022865 273 GNVSVM-RAALECCHKV 288 (291)
Q Consensus 273 g~~~~~-~~~~~~l~~~ 288 (291)
++...+ ...++.|+++
T Consensus 341 ~t~~lI~~~~l~~MK~g 357 (494)
T 3d64_A 341 GNYHVINHDHMKAMRHN 357 (494)
T ss_dssp SSSCSBCHHHHHHCCTT
T ss_pred CcccccCHHHHhhCCCC
Confidence 765544 3555666664
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0097 Score=50.88 Aligned_cols=79 Identities=27% Similarity=0.311 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
.++++||+|+ |.+|...+..+...|+ +|+.+++++++.+.+ ++.+... .+..+- +..++.+.+.+.. .+.
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 111 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGT 111 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence 4678999987 9999998888878898 899988887654433 2234332 222221 1223333333322 136
Q ss_pred ccEEEEcCC
Q 022865 265 VDYSFECIG 273 (291)
Q Consensus 265 ~d~v~d~~g 273 (291)
+|++|++.|
T Consensus 112 id~li~~Ag 120 (279)
T 3ctm_A 112 IDVFVANAG 120 (279)
T ss_dssp CSEEEECGG
T ss_pred CCEEEECCc
Confidence 999999987
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.0054 Score=52.23 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=49.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
.++++||+|+ |++|...+..+...|+ +|+.++++.++.+.. .. ..+ |..+ ..++.+.+.+.. .+++|++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~---~~-~~~~~Dv~d-~~~v~~~~~~~~~~~g~iD~l 100 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNY-RVVATSRSIKPSADP---DI-HTVAGDISK-PETADRIVREGIERFGRIDSL 100 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCCCCSST---TE-EEEESCTTS-HHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChhhcccC---ce-EEEEccCCC-HHHHHHHHHHHHHHCCCCCEE
Confidence 4678999987 9999999988888999 899998876643211 11 122 2222 233333333322 2479999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|++.|.
T Consensus 101 v~nAg~ 106 (260)
T 3un1_A 101 VNNAGV 106 (260)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.024 Score=48.88 Aligned_cols=74 Identities=19% Similarity=0.287 Sum_probs=48.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-------hhHHHHH---hcCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-------KKFDRAK---NFGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-------~~~~~~~---~~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
..+|+|+|+ |.+|...+..+...|. +|+++++++ ++.+.++ ..++. ++..+-.+. +.+.+...
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~---~~l~~~~~- 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGN-PTYALVRKTITAANPETKEELIDNYQSLGVI-LLEGDINDH---ETLVKAIK- 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTC-CEEEEECCSCCSSCHHHHHHHHHHHHHTTCE-EEECCTTCH---HHHHHHHT-
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCC-cEEEEECCCcccCChHHHHHHHHHHHhCCCE-EEEeCCCCH---HHHHHHHh-
Confidence 357999998 9999999988888898 888888876 5544332 33543 332221112 22333332
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+||++++.
T Consensus 76 ~~d~vi~~a~~ 86 (307)
T 2gas_A 76 QVDIVICAAGR 86 (307)
T ss_dssp TCSEEEECSSS
T ss_pred CCCEEEECCcc
Confidence 59999999885
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=95.96 E-value=0.0098 Score=49.14 Aligned_cols=95 Identities=14% Similarity=0.068 Sum_probs=64.0
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-----CCeEEEEcCChhhHHHHHhc----C-----CC--EEeCCCCCCchHH
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-----ASRVIGIDIDPKKFDRAKNF----G-----VT--EFVNPKDHDKPIQ 254 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-----~~~v~~~~~~~~~~~~~~~~----g-----a~--~~i~~~~~~~~~~ 254 (291)
.++++++||-+|+|. |..+..+++..+ ..+|++++.+++.++.+++. + .+ .++..+. ...+.
T Consensus 77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~-~~~~~ 154 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNI-YQVNE 154 (227)
T ss_dssp TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCG-GGCCH
T ss_pred hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECCh-Hhccc
Confidence 577899999999977 888899998876 23899999999988877643 3 11 1222111 01110
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.. ...+.||+|+........+..+.+.|+++|
T Consensus 155 ~~~--~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG 187 (227)
T 2pbf_A 155 EEK--KELGLFDAIHVGASASELPEILVDLLAENG 187 (227)
T ss_dssp HHH--HHHCCEEEEEECSBBSSCCHHHHHHEEEEE
T ss_pred ccC--ccCCCcCEEEECCchHHHHHHHHHhcCCCc
Confidence 000 112479999988776667788899999983
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.002 Score=54.15 Aligned_cols=92 Identities=16% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE----EeCCCCCCchHHHHHHhhcCCCccE
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE----FVNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~----~i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
..+|.+||-+|.|. |..+..+++..+. ++++++.+++-++.+++..... .+.. .++...+..+..+.||.
T Consensus 58 ~~~G~rVLdiG~G~-G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~----~~a~~~~~~~~~~~FD~ 131 (236)
T 3orh_A 58 SSKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK----GLWEDVAPTLPDGHFDG 131 (236)
T ss_dssp TTTCEEEEEECCTT-SHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE----SCHHHHGGGSCTTCEEE
T ss_pred ccCCCeEEEECCCc-cHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEe----ehHHhhcccccccCCce
Confidence 46889999999875 7788888876665 8999999999988887653321 1111 12333344444557997
Q ss_pred E-EEcCCC----------hHHHHHHHHHhhccC
Q 022865 268 S-FECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 268 v-~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
| +|+... ...+..+.+.|++||
T Consensus 132 i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG 164 (236)
T 3orh_A 132 ILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp EEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred EEEeeeecccchhhhcchhhhhhhhhheeCCCC
Confidence 6 555432 234677888999983
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.94 E-value=0.051 Score=46.87 Aligned_cols=73 Identities=16% Similarity=0.255 Sum_probs=51.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|... . .+..+.+. .+|+||.|++.+.
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~D~vi~~v~~~~ 73 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGAET---A----STAKAIAE-----QCDVIITMLPNSP 73 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCEE---C----SSHHHHHH-----HCSEEEECCSSHH
T ss_pred eEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCCee---c----CCHHHHHh-----CCCEEEEECCCHH
Confidence 79999999999998888888898 8999999999888777666421 1 11222222 3678888877655
Q ss_pred HHHHHH
Q 022865 277 VMRAAL 282 (291)
Q Consensus 277 ~~~~~~ 282 (291)
.++..+
T Consensus 74 ~~~~~~ 79 (299)
T 1vpd_A 74 HVKEVA 79 (299)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 455444
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.93 E-value=0.017 Score=49.22 Aligned_cols=80 Identities=20% Similarity=0.116 Sum_probs=50.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHHH----hcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRAK----NFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~~----~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ |++|...++.+...|+ +|+.+ .+++++++.+. +.+... .+..+- +..++.+.+.+.. .+
T Consensus 25 ~~k~vlITGas~gIG~a~a~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 25 DTPVVLVTGGSRGIGAAVCRLAARQGW-RVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CSCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 4678999987 9999999998889999 77665 67766654432 234322 222221 1223333333322 13
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 104 ~id~li~nAg~ 114 (272)
T 4e3z_A 104 RLDGLVNNAGI 114 (272)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999883
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.019 Score=47.91 Aligned_cols=80 Identities=13% Similarity=0.169 Sum_probs=50.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhhHHHHH-hc---CCCE-EeCCCC-CCchHHHHHHhhc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGAS------RVIGIDIDPKKFDRAK-NF---GVTE-FVNPKD-HDKPIQQVLVDLT 261 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~------~v~~~~~~~~~~~~~~-~~---ga~~-~i~~~~-~~~~~~~~v~~~~ 261 (291)
++++||+|+ |.+|...++.+...|+. +|+.+++++++++.+. ++ +... .+..+- +..++.+.+.+..
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 467999987 99999988877778874 7888888887765443 22 3322 222221 1223333333322
Q ss_pred --CCCccEEEEcCCC
Q 022865 262 --DGGVDYSFECIGN 274 (291)
Q Consensus 262 --~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 82 ~~~g~id~li~~Ag~ 96 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGV 96 (244)
T ss_dssp HHTSCCSEEEECCCC
T ss_pred HhCCCCCEEEEcCCc
Confidence 2479999999883
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=95.92 E-value=0.014 Score=49.93 Aligned_cols=72 Identities=14% Similarity=0.031 Sum_probs=48.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|||+|+ |.+|...++.+... |. +|+++++++++.+.+...+.. ++..+-.+. +.+.+... ++|+||.+.+.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~-~V~~~~R~~~~~~~~~~~~v~-~~~~D~~d~---~~l~~~~~-~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHID-HFHIGVRNVEKVPDDWRGKVS-VRQLDYFNQ---ESMVEAFK-GMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCT-TEEEEESSGGGSCGGGBTTBE-EEECCTTCH---HHHHHHTT-TCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCC-cEEEEECCHHHHHHhhhCCCE-EEEcCCCCH---HHHHHHHh-CCCEEEEeCCC
Confidence 5899998 99999988888777 77 899998988765443333432 222221112 23444333 69999999885
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=95.90 E-value=0.017 Score=48.12 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=49.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
++++||+|+ |.+|...++.+...|+ +|++ .++++++.+.+ ++.+... .+ |..+ ..++.+.+.+.. .+
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~-~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcC
Confidence 468899987 9999999988888999 7877 57777665433 2234322 22 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 79 ~id~li~~Ag~ 89 (244)
T 1edo_A 79 TIDVVVNNAGI 89 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999873
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=95.90 E-value=0.039 Score=51.85 Aligned_cols=79 Identities=16% Similarity=0.242 Sum_probs=52.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHhcCCCEEe---CCCCCCchHHHHHHhh
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FDRAKNFGVTEFV---NPKDHDKPIQQVLVDL 260 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-------~~~~~~~ga~~~i---~~~~~~~~~~~~v~~~ 260 (291)
++++.++||+|+ |.+|...+..+...|+.+|+.++++... .+.+++.|....+ |..+ ..++.+.+.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd-~~~v~~~~~~- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAE-RDALAALVTA- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSC-HHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCC-HHHHHHHHhc-
Confidence 567899999987 9999998888888898678888777531 1223344543322 2221 2233333433
Q ss_pred cCCCccEEEEcCCC
Q 022865 261 TDGGVDYSFECIGN 274 (291)
Q Consensus 261 ~~gg~d~v~d~~g~ 274 (291)
+.+|+||++.|.
T Consensus 334 --~~ld~VVh~AGv 345 (511)
T 2z5l_A 334 --YPPNAVFHTAGI 345 (511)
T ss_dssp --SCCSEEEECCCC
T ss_pred --CCCcEEEECCcc
Confidence 579999999884
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=95.89 E-value=0.018 Score=48.15 Aligned_cols=74 Identities=23% Similarity=0.253 Sum_probs=47.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC-CchHHHHHH---hhcC-CCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-DKPIQQVLV---DLTD-GGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~-~~~~~~~v~---~~~~-gg~d~ 267 (291)
+++++||+|+ |++|...++.+...|+ +|+++++++++.+ +....+..+-. ..++.+.+. +..+ +++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~ 79 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 79 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCChhhcc-----CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCE
Confidence 4678999988 9999999988888898 8999988876532 11112211111 122222222 2222 57999
Q ss_pred EEEcCC
Q 022865 268 SFECIG 273 (291)
Q Consensus 268 v~d~~g 273 (291)
+|++.|
T Consensus 80 lv~~Ag 85 (241)
T 1dhr_A 80 ILCVAG 85 (241)
T ss_dssp EEECCC
T ss_pred EEEccc
Confidence 999988
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.88 E-value=0.015 Score=48.43 Aligned_cols=73 Identities=26% Similarity=0.330 Sum_probs=47.2
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC-CchHHHHHH---hhcC-CCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-DKPIQQVLV---DLTD-GGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~-~~~~~~~v~---~~~~-gg~d~v 268 (291)
++++||+|+ |++|...++.+...|+ +|+++++++++.+ .....+..+-. ..++.+.+. +..+ +++|++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQA-----DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTS-----SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecCccccc-----cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 568999988 9999999998888999 8999988876532 11112211111 122222222 2222 579999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
|++.|
T Consensus 77 v~~Ag 81 (236)
T 1ooe_A 77 FCVAG 81 (236)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99998
|
| >3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=95.88 E-value=0.051 Score=48.30 Aligned_cols=79 Identities=16% Similarity=0.200 Sum_probs=55.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+|.|+|.|.+|...+..++..|. +|++.++++++++.++++|+... .+..+.+.+.. ...|+||-|+...
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~-~V~~~dr~~~~~~~a~~~G~~~~-------~~~~e~~~~a~-~~aDlVilavP~~ 79 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANH-SVFGYNRSRSGAKSAVDEGFDVS-------ADLEATLQRAA-AEDALIVLAVPMT 79 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSCHHHHHHHHHTTCCEE-------SCHHHHHHHHH-HTTCEEEECSCHH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCCeee-------CCHHHHHHhcc-cCCCEEEEeCCHH
Confidence 469999999999999999999998 89999999999999988887321 11222332210 1467888887753
Q ss_pred HHHHHHHHH
Q 022865 276 SVMRAALEC 284 (291)
Q Consensus 276 ~~~~~~~~~ 284 (291)
.+...++.
T Consensus 80 -~~~~vl~~ 87 (341)
T 3ktd_A 80 -AIDSLLDA 87 (341)
T ss_dssp -HHHHHHHH
T ss_pred -HHHHHHHH
Confidence 24444333
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=95.87 E-value=0.038 Score=51.71 Aligned_cols=83 Identities=19% Similarity=0.243 Sum_probs=53.6
Q ss_pred CCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-------hHHHHHhcCCCEEeC-CCC-CCchHHHHHHh
Q 022865 192 VEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-------KFDRAKNFGVTEFVN-PKD-HDKPIQQVLVD 259 (291)
Q Consensus 192 ~~~g--~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-------~~~~~~~~ga~~~i~-~~~-~~~~~~~~v~~ 259 (291)
+++. +++||+|+ |++|...++.+...|+.+|+.+.++.. ..+.+++.|....+. .+- +..++.+.+.+
T Consensus 234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~ 313 (496)
T 3mje_A 234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE 313 (496)
T ss_dssp CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 3455 89999987 999999888887889878888877532 123344566544321 211 22344455554
Q ss_pred hcC-CCccEEEEcCCC
Q 022865 260 LTD-GGVDYSFECIGN 274 (291)
Q Consensus 260 ~~~-gg~d~v~d~~g~ 274 (291)
... +++|+||++.|.
T Consensus 314 i~~~g~ld~vVh~AGv 329 (496)
T 3mje_A 314 LPEDAPLTAVFHSAGV 329 (496)
T ss_dssp CCTTSCEEEEEECCCC
T ss_pred HHHhCCCeEEEECCcc
Confidence 433 379999999884
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.016 Score=49.56 Aligned_cols=73 Identities=19% Similarity=0.149 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe--CCCCCCchHHHHHHhhc--CCCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV--NPKDHDKPIQQVLVDLT--DGGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i--~~~~~~~~~~~~v~~~~--~gg~d~v 268 (291)
+|+++||.|+ +++|++.++.+...|+ +|+.+++++++ .......+ |..+ .++....+.+.. -|++|++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~-----~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~G~iDil 82 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGA-QVLTTARARPE-----GLPEELFVEADLTT-KEGCAIVAEATRQRLGGVDVI 82 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTC-EEEEEESSCCT-----TSCTTTEEECCTTS-HHHHHHHHHHHHHHTSSCSEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCC-EEEEEECCchh-----CCCcEEEEEcCCCC-HHHHHHHHHHHHHHcCCCCEE
Confidence 6789999987 9999999999999999 89999887542 11111122 2222 223333333322 2479999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
+++.|
T Consensus 83 VnnAG 87 (261)
T 4h15_A 83 VHMLG 87 (261)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99887
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=95.85 E-value=0.032 Score=47.91 Aligned_cols=80 Identities=20% Similarity=0.258 Sum_probs=49.8
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHHH-hcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRAK-NFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~---~~~~~~-~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|++++++++ .++.+. +.+....+..+- +..++.+.+.+.. .+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGA-QLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999986 6999999988888899 8999888775 222222 234222322221 1233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 99 ~iD~lv~~Ag~ 109 (285)
T 2p91_A 99 SLDIIVHSIAY 109 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=95.84 E-value=0.058 Score=47.33 Aligned_cols=45 Identities=20% Similarity=0.327 Sum_probs=39.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~l~~~g~ 75 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGY-ALQVWNRTPARAASLAALGA 75 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTC
T ss_pred CCEEEEECccHHHHHHHHHHHhCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 3589999999999998888888898 89999999999888776665
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.013 Score=51.38 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=48.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHhcCC--C-EEeCCCCCC-chHHHHHHhhcCCCccE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRAKNFGV--T-EFVNPKDHD-KPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~--~~~~~~ga--~-~~i~~~~~~-~~~~~~v~~~~~gg~d~ 267 (291)
+.+|||+|+ |.+|...++.+...|+ +|+++++++++. +.+++++. . ..+..+-.+ ..+.+.+... ++|+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~ 78 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGY-EVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE 78 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence 578999988 9999999988888898 999998876543 23334321 1 222222111 2233333322 6899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
||++++.
T Consensus 79 vih~A~~ 85 (345)
T 2z1m_A 79 VYNLAAQ 85 (345)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=95.82 E-value=0.032 Score=49.04 Aligned_cols=78 Identities=23% Similarity=0.263 Sum_probs=49.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhhHHHH----HhcCCCEEeCCCCCCchHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---------DPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~---------~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~v~~ 259 (291)
.++++||+|+ |++|...++.+...|+ +|++++. +.++.+.+ ++.+.....+..+ ..++.+.+.+
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga-~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~-~~~~~~~~~~ 85 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT 85 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCC-HHHHHHHHHH
Confidence 4678999988 9999999988888999 8888654 34443322 2334433444443 2233333333
Q ss_pred hc--CCCccEEEEcCC
Q 022865 260 LT--DGGVDYSFECIG 273 (291)
Q Consensus 260 ~~--~gg~d~v~d~~g 273 (291)
.. .+++|++|++.|
T Consensus 86 ~~~~~g~iD~lVnnAG 101 (319)
T 1gz6_A 86 ALDTFGRIDVVVNNAG 101 (319)
T ss_dssp HHHHTSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 21 247999999988
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=95.82 E-value=0.042 Score=50.76 Aligned_cols=76 Identities=13% Similarity=0.048 Sum_probs=48.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+++|+|+|+|.+|...++.+...|. +|++++++.++.+.+. +++....+..+-.+. +.+.++.. ++|+|+++++
T Consensus 3 ~k~VlViGaG~iG~~ia~~L~~~G~-~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~---~~l~~~l~-~~DvVIn~a~ 77 (450)
T 1ff9_A 3 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDVNDD---AALDAEVA-KHDLVISLIP 77 (450)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESSHHHHHHTTTTCTTEEEEECCTTCH---HHHHHHHT-TSSEEEECCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcC-EEEEEECCHHHHHHHHHhcCCceEEEeecCCH---HHHHHHHc-CCcEEEECCc
Confidence 5689999999999998888888897 7999999887765443 233212221111111 12223222 6999999998
Q ss_pred Ch
Q 022865 274 NV 275 (291)
Q Consensus 274 ~~ 275 (291)
..
T Consensus 78 ~~ 79 (450)
T 1ff9_A 78 YT 79 (450)
T ss_dssp --
T ss_pred cc
Confidence 63
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=95.78 E-value=0.041 Score=51.35 Aligned_cols=84 Identities=17% Similarity=0.207 Sum_probs=54.2
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHhcCCCEE-eCCCC-CCchHHHHHHhh
Q 022865 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FDRAKNFGVTEF-VNPKD-HDKPIQQVLVDL 260 (291)
Q Consensus 191 ~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-------~~~~~~~ga~~~-i~~~~-~~~~~~~~v~~~ 260 (291)
.++++.++||+|+ |++|...+..+...|+.+|+.++++... .+.+++.|.... +..+- +..++.+.+.+.
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 3567899999987 9999998887777898668888887641 122344565332 22211 123444445444
Q ss_pred cC-CCccEEEEcCCC
Q 022865 261 TD-GGVDYSFECIGN 274 (291)
Q Consensus 261 ~~-gg~d~v~d~~g~ 274 (291)
.. +.+|.||++.|.
T Consensus 302 ~~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 302 GDDVPLSAVFHAAAT 316 (486)
T ss_dssp CTTSCEEEEEECCCC
T ss_pred HhcCCCcEEEECCcc
Confidence 22 378999999884
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=95.77 E-value=0.031 Score=46.98 Aligned_cols=94 Identities=15% Similarity=0.140 Sum_probs=64.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC----EEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~----~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.....++++.+||-+|+| .|..+..+++..+. +|+++|.+++.++.+++.... .++..+.. +. ...
T Consensus 47 ~~~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~--~~-----~~~ 117 (266)
T 3ujc_A 47 ILSDIELNENSKVLDIGSG-LGGGCMYINEKYGA-HTHGIDICSNIVNMANERVSGNNKIIFEANDIL--TK-----EFP 117 (266)
T ss_dssp HTTTCCCCTTCEEEEETCT-TSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHTCCSCTTEEEEECCTT--TC-----CCC
T ss_pred HHHhcCCCCCCEEEEECCC-CCHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhhcCCCeEEEECccc--cC-----CCC
Confidence 4455677889999999987 58888888887777 999999999999999876432 12221110 00 122
Q ss_pred CCCccEEEEcCC--------ChHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIG--------NVSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g--------~~~~~~~~~~~l~~~ 288 (291)
.+.||+|+..-. ....+..+.+.|+++
T Consensus 118 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pg 152 (266)
T 3ujc_A 118 ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPT 152 (266)
T ss_dssp TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCC
Confidence 347999997632 123467777888887
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.058 Score=46.86 Aligned_cols=46 Identities=26% Similarity=0.440 Sum_probs=40.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
.+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|...
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~~~ 53 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGL-STWGADLNPQACANLLAEGACG 53 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCCcc
Confidence 579999999999998888888898 9999999999998888877654
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=95.76 E-value=0.026 Score=48.04 Aligned_cols=79 Identities=15% Similarity=0.265 Sum_probs=50.4
Q ss_pred CCCEEEEEc---CChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHH-HhcCCCE-Ee--CCCCCCchHHHHHHh---hcC
Q 022865 194 PGSIVAVFG---LGTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRA-KNFGVTE-FV--NPKDHDKPIQQVLVD---LTD 262 (291)
Q Consensus 194 ~g~~vlI~G---~g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~---~~~ 262 (291)
+++++||+| ++++|...++.+...|+ +|+.+++++++ ++.+ ++++... .+ |..+ ..++.+.+.+ ..+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQN-EEHLASLAGRVTEAIG 83 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTC-HHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCC-EEEEEecChHHHHHHHHHhcCCCceEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 467899998 48999999988888999 89998888765 2333 3444321 22 2222 2233333332 222
Q ss_pred --CCccEEEEcCCC
Q 022865 263 --GGVDYSFECIGN 274 (291)
Q Consensus 263 --gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 84 ~~~~iD~lv~nAg~ 97 (269)
T 2h7i_A 84 AGNKLDGVVHSIGF 97 (269)
T ss_dssp TTCCEEEEEECCCC
T ss_pred CCCCceEEEECCcc
Confidence 179999999883
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=95.75 E-value=0.061 Score=47.24 Aligned_cols=76 Identities=20% Similarity=0.222 Sum_probs=48.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHHhc------CCCEEeCCCCCCchHHHHHHhhcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAKNF------GVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~----~~~~~~~~------ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.+.+|||+|+ |.+|...++.+...|. +|+++++... .++.+.+. .--..+..+-.+. +.+.++..
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~ 99 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQ-VVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDL---TTCEQVMK 99 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCH---HHHHHHTT
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCH---HHHHHHhc
Confidence 3579999998 9999999998888998 8999888543 33333332 1112332222112 23444333
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
++|+||.+++.
T Consensus 100 -~~d~Vih~A~~ 110 (351)
T 3ruf_A 100 -GVDHVLHQAAL 110 (351)
T ss_dssp -TCSEEEECCCC
T ss_pred -CCCEEEECCcc
Confidence 79999999984
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=95.74 E-value=0.06 Score=45.87 Aligned_cols=80 Identities=9% Similarity=0.189 Sum_probs=50.0
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~---~~~~~-~~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+.++++++ .++.+ .+.+....+..+- +..++.+.+.+.. .+
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 83 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 83 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999975 6999999888888898 8999888765 33333 2334222222221 1223333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 84 ~id~lv~nAg~ 94 (275)
T 2pd4_A 84 SLDFIVHSVAF 94 (275)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 79999999884
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.052 Score=45.92 Aligned_cols=80 Identities=23% Similarity=0.373 Sum_probs=49.9
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChh---hHHHH-HhcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPK---KFDRA-KNFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~---~~~~~-~~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ |++|...++.+...|+ +|+.++++++ .++.+ .+++....+..+- +..++.+.+.+.. .+
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678999986 6999998888888899 8999888875 23322 2234323332221 1223333333322 14
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|.
T Consensus 86 ~iD~lv~~Ag~ 96 (261)
T 2wyu_A 86 GLDYLVHAIAF 96 (261)
T ss_dssp SEEEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 79999999884
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=95.73 E-value=0.019 Score=53.41 Aligned_cols=82 Identities=32% Similarity=0.410 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
-.|++|.|+|.|.+|..+++.++.+|+ +|++++++..+...+...|.. +. ++ .++. ...|+|+-++
T Consensus 255 l~GktVgIIG~G~IG~~vA~~l~~~G~-~Viv~d~~~~~~~~a~~~g~~-~~-------~l----~ell-~~aDiVi~~~ 320 (479)
T 1v8b_A 255 ISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------TL----DEIV-DKGDFFITCT 320 (479)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------CH----HHHT-TTCSEEEECC
T ss_pred cCCCEEEEEeeCHHHHHHHHHHHhCcC-EEEEEeCChhhHHHHHHcCCE-ec-------CH----HHHH-hcCCEEEECC
Confidence 468899999999999999999999999 999999998875444555552 11 12 2221 2478888887
Q ss_pred CChHHH-HHHHHHhhcc
Q 022865 273 GNVSVM-RAALECCHKV 288 (291)
Q Consensus 273 g~~~~~-~~~~~~l~~~ 288 (291)
++...+ ...++.|+++
T Consensus 321 ~t~~lI~~~~l~~MK~g 337 (479)
T 1v8b_A 321 GNVDVIKLEHLLKMKNN 337 (479)
T ss_dssp SSSSSBCHHHHTTCCTT
T ss_pred ChhhhcCHHHHhhcCCC
Confidence 665544 2444555554
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=95.73 E-value=0.017 Score=49.81 Aligned_cols=91 Identities=18% Similarity=0.131 Sum_probs=59.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-----C--------CEEeCCCCCCchHHHHHHh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-----V--------TEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g-----a--------~~~i~~~~~~~~~~~~v~~ 259 (291)
.++.+||.+|+|. |..+..+++. +..+|++++.+++-.+.+++.- . +.-+.... .+..+.+..
T Consensus 74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~--~D~~~~l~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI--GDGFEFIKN 149 (281)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE--SCHHHHHHH
T ss_pred CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEE--CchHHHhcc
Confidence 4568999998865 6677777777 7669999999999998887542 1 10010000 123333433
Q ss_pred hcCCCccEEEEcCC----------ChHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFECIG----------NVSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~~g----------~~~~~~~~~~~l~~~g 289 (291)
.+.||+|+-... ....++.+.+.|+++|
T Consensus 150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG 187 (281)
T 1mjf_A 150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPG 187 (281)
T ss_dssp --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEE
T ss_pred --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCc
Confidence 457997775433 2456788888999883
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.72 E-value=0.028 Score=49.10 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=46.9
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHHHhcC--CC-EEeCCCC-CCchHHHHHHhhcC
Q 022865 190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRAKNFG--VT-EFVNPKD-HDKPIQQVLVDLTD 262 (291)
Q Consensus 190 ~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~--~~~~~~g--a~-~~i~~~~-~~~~~~~~v~~~~~ 262 (291)
-+-+++.+|||+|+ |.+|...++.+...|+ +|++++++.++. +.+..+. .. ..+..+- +...+.+.+...
T Consensus 9 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-- 85 (335)
T 1rpn_A 9 HHGSMTRSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-- 85 (335)
T ss_dssp ------CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH--
T ss_pred cccccCCeEEEECCCChHHHHHHHHHHHCCC-eEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc--
Confidence 44567889999988 9999999988888898 899988876531 2222221 11 1222211 112233333322
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
++|+||.+++.
T Consensus 86 -~~d~Vih~A~~ 96 (335)
T 1rpn_A 86 -QPQEVYNLAAQ 96 (335)
T ss_dssp -CCSEEEECCSC
T ss_pred -CCCEEEECccc
Confidence 68999999884
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=95.72 E-value=0.0068 Score=51.08 Aligned_cols=75 Identities=21% Similarity=0.216 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
.++++||+|+ |++|...++.+...|+ +|+++++++++++.+. + ...|..+ .+++.+.+.+.. .+++|++|+
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~--~--~~~D~~~-~~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLF--G--VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSE--E--EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHhc--C--eeccCCC-HHHHHHHHHHHHHHcCCCCEEEE
Confidence 4678999987 9999999988888998 8999988776543211 1 2223332 223333333322 247999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 88 ~Ag~ 91 (247)
T 1uzm_A 88 NAGL 91 (247)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 9884
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.031 Score=52.67 Aligned_cols=84 Identities=12% Similarity=0.068 Sum_probs=53.6
Q ss_pred CCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCCh-------------h----hHHHHHhcCCCEEe-CCCC-C
Q 022865 191 KVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDP-------------K----KFDRAKNFGVTEFV-NPKD-H 249 (291)
Q Consensus 191 ~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~-------------~----~~~~~~~~ga~~~i-~~~~-~ 249 (291)
.+++++++||+|+ |++|...++.+...|+.+++.+ +++. + ..+.+++.|....+ ..+- +
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTD 326 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTS
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCC
Confidence 3567889999987 9999998888778898667777 6762 1 22333445654322 2211 2
Q ss_pred CchHHHHHHhhc-CCCccEEEEcCCC
Q 022865 250 DKPIQQVLVDLT-DGGVDYSFECIGN 274 (291)
Q Consensus 250 ~~~~~~~v~~~~-~gg~d~v~d~~g~ 274 (291)
..++.+.+.+.. .+++|.||++.|.
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~AGv 352 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLPPT 352 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcC
Confidence 234444555443 2379999999884
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.014 Score=48.27 Aligned_cols=64 Identities=16% Similarity=0.233 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.++++||+|+ +++|...++.+...|+ +|+.++++++ .|..+ ..++.+.+.++ +++|+++++.
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~-------------~D~~~-~~~v~~~~~~~--g~id~lv~nA 67 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHT-IVHVASRQTG-------------LDISD-EKSVYHYFETI--GAFDHLIVTA 67 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTE-EEEEESGGGT-------------CCTTC-HHHHHHHHHHH--CSEEEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEecCCcc-------------cCCCC-HHHHHHHHHHh--CCCCEEEECC
Confidence 4678999987 9999998888878898 8999877654 22222 23344444443 5799999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 68 g~ 69 (223)
T 3uce_A 68 GS 69 (223)
T ss_dssp CC
T ss_pred CC
Confidence 84
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.70 E-value=0.031 Score=45.13 Aligned_cols=62 Identities=26% Similarity=0.322 Sum_probs=43.6
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
++||+|+ |.+|...++.+. .|+ +|++++++++ ....|..+ ..++.+.+.+. +++|++|++.|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~-~V~~~~r~~~----------~~~~D~~~-~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKA-EVITAGRHSG----------DVTVDITN-IDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTS-EEEEEESSSS----------SEECCTTC-HHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCC-eEEEEecCcc----------ceeeecCC-HHHHHHHHHHh--CCCCEEEECCC
Confidence 7999988 999999888887 898 8999888764 12223322 23344444443 47999999988
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.013 Score=48.97 Aligned_cols=96 Identities=21% Similarity=0.204 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhc--C-
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLT--D- 262 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~--~- 262 (291)
...++++||-+|+| .|..++.+++.++ ..+|++++.+++..+.+++. |....+.... .+..+.+.++. +
T Consensus 69 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--~d~~~~l~~l~~~~~ 145 (232)
T 3cbg_A 69 SLTGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRL--GPALATLEQLTQGKP 145 (232)
T ss_dssp HHHTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHHHHHHTSSS
T ss_pred HhcCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcCC
Confidence 34567899999987 5888999998874 23999999999988877643 4422111111 12333344432 2
Q ss_pred -CCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 263 -GGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 263 -gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
+.||+||-.... ...++.+++.|+++|
T Consensus 146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG 176 (232)
T 3cbg_A 146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGG 176 (232)
T ss_dssp CCCEEEEEECSCGGGHHHHHHHHHHTEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHHHcCCCe
Confidence 579998844332 355788888888883
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.69 E-value=0.058 Score=46.53 Aligned_cols=73 Identities=21% Similarity=0.246 Sum_probs=47.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC-----hhhHHHHHh---cCCCEEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID-----PKKFDRAKN---FGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~-----~~~~~~~~~---~ga~~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
.+|||+|+ |.+|...+..+...|. +|++++++ +++.+.+++ .+. +++..+-.+. +.+.+... ++|
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~~~~~~~~~-~~~~~D~~d~---~~l~~~~~-~~d 78 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPEVVSNIDKVQMLLYFKQLGA-KLIEASLDDH---QRLVDALK-QVD 78 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSCCSSCHHHHHHHHHHHTTTC-EEECCCSSCH---HHHHHHHT-TCS
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCC-cEEEEECCCcccchhHHHHHHHHHhCCe-EEEeCCCCCH---HHHHHHHh-CCC
Confidence 57999998 9999999988888898 89998887 344443332 343 3332222112 23333332 599
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+||.+++.
T Consensus 79 ~vi~~a~~ 86 (313)
T 1qyd_A 79 VVISALAG 86 (313)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999874
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=95.69 E-value=0.018 Score=48.96 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=35.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~ 234 (291)
++ +++|+|+|+.|.+++..+...|+++|++++++.+|.+.
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~ 147 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKA 147 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHT
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 45 89999999999999999999999889999999887554
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.68 E-value=0.04 Score=48.36 Aligned_cols=46 Identities=26% Similarity=0.449 Sum_probs=38.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
.|++|.|+|.|.+|...++.++.+|+ +|++.+++.++. .+.++|+.
T Consensus 141 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~g~~ 186 (313)
T 2ekl_A 141 AGKTIGIVGFGRIGTKVGIIANAMGM-KVLAYDILDIRE-KAEKINAK 186 (313)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSCCHH-HHHHTTCE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCcchh-HHHhcCce
Confidence 57899999999999999999999999 999999888764 35566653
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=95.66 E-value=0.041 Score=46.40 Aligned_cols=96 Identities=17% Similarity=0.277 Sum_probs=61.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc----
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---- 261 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~---- 261 (291)
...++++||-+|+|. |..++.+++.+. ..+|+++|.+++..+.+++ .|...-+.... .+..+.+..+.
T Consensus 76 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~ 152 (247)
T 1sui_A 76 KLINAKNTMEIGVYT-GYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDEK 152 (247)
T ss_dssp HHTTCCEEEEECCGG-GHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSGG
T ss_pred HhhCcCEEEEeCCCc-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEE--CCHHHHHHHHHhccC
Confidence 345678999998865 888888998873 2399999999998887764 34321111111 12223333321
Q ss_pred -CCCccEEEEcCC---ChHHHHHHHHHhhccC
Q 022865 262 -DGGVDYSFECIG---NVSVMRAALECCHKVS 289 (291)
Q Consensus 262 -~gg~d~v~d~~g---~~~~~~~~~~~l~~~g 289 (291)
.+.||+||-... ....++.+.+.|+++|
T Consensus 153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG 184 (247)
T 1sui_A 153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGG 184 (247)
T ss_dssp GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTC
T ss_pred CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCe
Confidence 347998885433 2456788889999983
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=95.66 E-value=0.033 Score=48.63 Aligned_cols=75 Identities=20% Similarity=0.154 Sum_probs=49.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-----CCC-EEe---CCCCCCchHHHHHHhhcC
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-----GVT-EFV---NPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-----ga~-~~i---~~~~~~~~~~~~v~~~~~ 262 (291)
.++.+|||+|+ |.+|...+..+...|+ +|++++++.++.+.+.+. +.. ..+ |..+ ... +.++..
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~----~~~~~~ 82 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLK-QGA----YDEVIK 82 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTS-TTT----TTTTTT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcC-hHH----HHHHHc
Confidence 45689999988 9999999988888898 899998988765544321 211 122 2222 112 222222
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
++|+||.+++.
T Consensus 83 -~~d~vih~A~~ 93 (342)
T 1y1p_A 83 -GAAGVAHIASV 93 (342)
T ss_dssp -TCSEEEECCCC
T ss_pred -CCCEEEEeCCC
Confidence 69999999874
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.66 E-value=0.033 Score=48.79 Aligned_cols=77 Identities=18% Similarity=0.161 Sum_probs=48.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH----HHHh-cCCC-EEeCCCCCC-chHHHHHHhhcCCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD----RAKN-FGVT-EFVNPKDHD-KPIQQVLVDLTDGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~----~~~~-~ga~-~~i~~~~~~-~~~~~~v~~~~~gg~ 265 (291)
.+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+ .+.+ .+.. ..+..+-.+ ..+.+.+.. .++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~ 79 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGY-DVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPI 79 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCC-cEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCC
Confidence 3568999987 9999999998888999 8999887654322 1111 1221 233222211 223333332 379
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||++++.
T Consensus 80 d~vih~A~~ 88 (341)
T 3enk_A 80 TAAIHFAAL 88 (341)
T ss_dssp CEEEECCCC
T ss_pred cEEEECccc
Confidence 999999885
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=95.65 E-value=0.011 Score=49.03 Aligned_cols=90 Identities=14% Similarity=0.153 Sum_probs=62.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC------CeEEEEcCChhhHHHHHhc----C-------CCEEeCCCCCCchH
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA------SRVIGIDIDPKKFDRAKNF----G-------VTEFVNPKDHDKPI 253 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~------~~v~~~~~~~~~~~~~~~~----g-------a~~~i~~~~~~~~~ 253 (291)
.++++.+||-+|+|. |..+..+++..+. .+|++++.+++.++.+++. + .-.++..+. .
T Consensus 81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~-- 155 (227)
T 1r18_A 81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDG--R-- 155 (227)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCG--G--
T ss_pred hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCc--c--
Confidence 477899999999886 8888888887763 4899999999988777642 1 111221111 0
Q ss_pred HHHHHhhcC-CCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 254 QQVLVDLTD-GGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 254 ~~~v~~~~~-gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+ .+.. +.||+|+...........+.+.|+++|
T Consensus 156 -~---~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG 188 (227)
T 1r18_A 156 -K---GYPPNAPYNAIHVGAAAPDTPTELINQLASGG 188 (227)
T ss_dssp -G---CCGGGCSEEEEEECSCBSSCCHHHHHTEEEEE
T ss_pred -c---CCCcCCCccEEEECCchHHHHHHHHHHhcCCC
Confidence 0 1112 479999988776666788889999883
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=95.63 E-value=0.043 Score=47.26 Aligned_cols=43 Identities=26% Similarity=0.331 Sum_probs=36.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 45 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGF-DVTVWNRNPAKCAPLVALGA 45 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTC-CEEEECSSGGGGHHHHHHTC
T ss_pred eEEEEccCHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHCCC
Confidence 58899999999988887778898 89999999998887776664
|
| >1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.048 Score=47.42 Aligned_cols=75 Identities=16% Similarity=0.157 Sum_probs=51.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc-------CCCEEeCCCCCCchHHHHHHhhcCCCc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF-------GVTEFVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~-------ga~~~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
...++|.|+|+|.+|...++.+. .|+ .|++.++++++++.+.+. ++...-+. .+. .++
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~la-aG~-~V~v~d~~~~~~~~~~~~l~~~~~~~i~~~~~~-----------~~~--~~a 74 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAIA-SKH-EVVLQDVSEKALEAAREQIPEELLSKIEFTTTL-----------EKV--KDC 74 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHHH-TTS-EEEEECSCHHHHHHHHHHSCGGGGGGEEEESSC-----------TTG--GGC
T ss_pred cCCCeEEEEeeCHHHHHHHHHHH-cCC-EEEEEECCHHHHHHHHHHHHHHHhCCeEEeCCH-----------HHH--cCC
Confidence 45678999999999988777777 899 999999999998887765 22111000 011 258
Q ss_pred cEEEEcCCChHHHHHHH
Q 022865 266 DYSFECIGNVSVMRAAL 282 (291)
Q Consensus 266 d~v~d~~g~~~~~~~~~ 282 (291)
|+||+++.....++..+
T Consensus 75 DlVieavpe~~~vk~~l 91 (293)
T 1zej_A 75 DIVMEAVFEDLNTKVEV 91 (293)
T ss_dssp SEEEECCCSCHHHHHHH
T ss_pred CEEEEcCcCCHHHHHHH
Confidence 99999998766544433
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.61 E-value=0.076 Score=45.30 Aligned_cols=43 Identities=23% Similarity=0.440 Sum_probs=37.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~ 44 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL 44 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTS
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhCCC
Confidence 58899999999998888888898 89999999998888877775
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=95.61 E-value=0.035 Score=47.19 Aligned_cols=79 Identities=18% Similarity=0.135 Sum_probs=48.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~ 262 (291)
.++++||+|+ +++|...++.+...|+ +|+.++ ++.++++.. ++.+... .+ |..+ ..++.+.+.+.. .
T Consensus 24 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGMGGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVAD-FESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCC-HHHHHHHHHHHHHHc
Confidence 4678899987 9999998888888899 888887 444443322 2223322 22 2222 223333333322 1
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++|++.|.
T Consensus 102 g~id~li~nAg~ 113 (269)
T 3gk3_A 102 GKVDVLINNAGI 113 (269)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 379999999883
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=95.60 E-value=0.053 Score=45.08 Aligned_cols=78 Identities=12% Similarity=0.061 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
....+++|+|.|.+|...++.+...|. |++++.++++.+.++ .+.. ++.-+. .-.+.+.+..-.++|.|+-++
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~~~g~--v~vid~~~~~~~~~~-~~~~-~i~gd~---~~~~~l~~a~i~~ad~vi~~~ 79 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELRGSEV--FVLAEDENVRKKVLR-SGAN-FVHGDP---TRVSDLEKANVRGARAVIVDL 79 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHSTTSEE--EEEESCGGGHHHHHH-TTCE-EEESCT---TCHHHHHHTTCTTCSEEEECC
T ss_pred CCCCEEEEECCChHHHHHHHHHHhCCe--EEEEECCHHHHHHHh-cCCe-EEEcCC---CCHHHHHhcCcchhcEEEEcC
Confidence 345689999999999988888877776 888999988887776 5543 333222 112334443223799999999
Q ss_pred CChHH
Q 022865 273 GNVSV 277 (291)
Q Consensus 273 g~~~~ 277 (291)
++...
T Consensus 80 ~~d~~ 84 (234)
T 2aef_A 80 ESDSE 84 (234)
T ss_dssp SCHHH
T ss_pred CCcHH
Confidence 98643
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=95.60 E-value=0.019 Score=46.19 Aligned_cols=93 Identities=20% Similarity=0.222 Sum_probs=62.1
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CC-C--EEeCCCCCCchHHHHHHhh
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GV-T--EFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga-~--~~i~~~~~~~~~~~~v~~~ 260 (291)
...++++++||-+|+|. |..+..+++..+ ..+|+++|.+++.++.+++. +. + .++..+. .+ +...
T Consensus 17 ~~~~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~--~~----~~~~ 89 (197)
T 3eey_A 17 KMFVKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGH--QN----MDKY 89 (197)
T ss_dssp HHHCCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCG--GG----GGGT
T ss_pred HhcCCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH--HH----Hhhh
Confidence 34567889999999876 788888888864 33999999999988777643 33 1 1222211 11 1122
Q ss_pred cCCCccEEEEcCCC---------------hHHHHHHHHHhhcc
Q 022865 261 TDGGVDYSFECIGN---------------VSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g~---------------~~~~~~~~~~l~~~ 288 (291)
..+.||+|+-..+- ...+..+.+.|+++
T Consensus 90 ~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g 132 (197)
T 3eey_A 90 IDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG 132 (197)
T ss_dssp CCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE
T ss_pred ccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC
Confidence 33479988865422 25688888999988
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.055 Score=47.61 Aligned_cols=75 Identities=17% Similarity=0.187 Sum_probs=49.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHH---hcCCCEEe-CCCCCCchHHHHHHhhcCCCc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAK---NFGVTEFV-NPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----~~~~~~~---~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~ 265 (291)
..+|||+|+ |.+|...++.+...|. +|+++++++ ++.+.+. ..++..+. |..+ ..++.+.+.+ .++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d-~~~l~~~~~~---~~~ 84 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHR-PTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINE-QEAMEKILKE---HEI 84 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTC-CEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTC-HHHHHHHHHH---TTC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCC-CEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCC-HHHHHHHHhh---CCC
Confidence 357999998 9999999998888897 888888866 4554333 33443322 2221 2333333332 269
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+++.
T Consensus 85 d~Vi~~a~~ 93 (346)
T 3i6i_A 85 DIVVSTVGG 93 (346)
T ss_dssp CEEEECCCG
T ss_pred CEEEECCch
Confidence 999999885
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=95.59 E-value=0.038 Score=50.14 Aligned_cols=85 Identities=21% Similarity=0.212 Sum_probs=51.5
Q ss_pred hcCC-CCCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChhh----------------HHHHHhcCCCE-EeCCCC
Q 022865 189 TAKV-EPGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPKK----------------FDRAKNFGVTE-FVNPKD 248 (291)
Q Consensus 189 ~~~~-~~g~~vlI~G~-g~vG~~ai~~a~~-~g~~~v~~~~~~~~~----------------~~~~~~~ga~~-~i~~~~ 248 (291)
...+ ..++++||+|+ +++|++.+..+.. .|+ +|++++++.+. .+.+++.|... .+..+-
T Consensus 40 ~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA-~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dv 118 (405)
T 3zu3_A 40 EGPIANGPKRVLVIGASTGYGLAARITAAFGCGA-DTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDA 118 (405)
T ss_dssp HCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred cCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCC-EEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCC
Confidence 3444 45678899987 9999987777777 899 88887665432 12344556433 222221
Q ss_pred -CCchHHHHHHhhc--CCCccEEEEcCCC
Q 022865 249 -HDKPIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 249 -~~~~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
+.+...+.+.+.. -|++|++++++|.
T Consensus 119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~ 147 (405)
T 3zu3_A 119 FSDEIKQLTIDAIKQDLGQVDQVIYSLAS 147 (405)
T ss_dssp TSHHHHHHHHHHHHHHTSCEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEcCcc
Confidence 1233333333321 2579999999885
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=95.58 E-value=0.035 Score=51.31 Aligned_cols=79 Identities=25% Similarity=0.359 Sum_probs=51.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH---HHHHhcCCCEEe-CCCCCCchHHHHHHh---hcCCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF---DRAKNFGVTEFV-NPKDHDKPIQQVLVD---LTDGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~---~~~~~~ga~~~i-~~~~~~~~~~~~v~~---~~~gg~ 265 (291)
+++++||+|+ |++|...++.+...|+ +|+.+++++... +...+++...+. |..+ ..+..+.+.+ ..++.+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga-~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd-~~~v~~~~~~~~~~~g~~i 289 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGA-TVVAIDVDGAAEDLKRVADKVGGTALTLDVTA-DDAVDKITAHVTEHHGGKV 289 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECGGGHHHHHHHHHHHTCEEEECCTTS-TTHHHHHHHHHHHHSTTCC
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCC-EEEEEeCCccHHHHHHHHHHcCCeEEEEecCC-HHHHHHHHHHHHHHcCCCc
Confidence 5678999987 9999998888888899 898887764322 333455554322 2222 2344444433 222249
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|++.|.
T Consensus 290 d~lV~nAGv 298 (454)
T 3u0b_A 290 DILVNNAGI 298 (454)
T ss_dssp SEEEECCCC
T ss_pred eEEEECCcc
Confidence 999999884
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=95.57 E-value=0.019 Score=48.32 Aligned_cols=82 Identities=18% Similarity=0.189 Sum_probs=48.2
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEc-CChhhH----HHHHhcCCCE-EeCCCC-CCchHHHHHHhhc--
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGID-IDPKKF----DRAKNFGVTE-FVNPKD-HDKPIQQVLVDLT-- 261 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~-~~~~~~----~~~~~~ga~~-~i~~~~-~~~~~~~~v~~~~-- 261 (291)
..+++++||+|+ +++|...+..+...|+ +|+.++ ++.++. +..++.+.+. .+..+- +..++.+.+.+..
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGF-RVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTE-EEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 346788999987 9999998888888899 787766 443332 2223344332 222221 1223333333322
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|++|++.|.
T Consensus 89 ~g~id~lv~~Ag~ 101 (256)
T 3ezl_A 89 VGEIDVLVNNAGI 101 (256)
T ss_dssp TCCEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2479999999883
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=95.57 E-value=0.052 Score=48.10 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.+.+|+|+|+|++|..++..+...|..+++.+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 467899999999999999999999999999988754
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=95.57 E-value=0.061 Score=45.08 Aligned_cols=97 Identities=14% Similarity=0.144 Sum_probs=64.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCC----EEeCCCCCCchHHHHHHhhcC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~----~~i~~~~~~~~~~~~v~~~~~ 262 (291)
....++||++||=+|+|. |..+..+++..|. .+|+++|.+++-++.+++.-.+ ..+..+..... .. ....
T Consensus 71 ~~l~ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~---~~-~~~~ 145 (233)
T 4df3_A 71 IELPVKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPE---KY-RHLV 145 (233)
T ss_dssp SCCCCCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGG---GG-TTTC
T ss_pred hhcCCCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCcc---cc-cccc
Confidence 557799999999999877 8889999998874 4899999999988777653221 12222211111 00 1112
Q ss_pred CCccEEEEcCCCh----HHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIGNV----SVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g~~----~~~~~~~~~l~~~g 289 (291)
+.+|+||.....+ ..+..+.+.|+++|
T Consensus 146 ~~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG 176 (233)
T 4df3_A 146 EGVDGLYADVAQPEQAAIVVRNARFFLRDGG 176 (233)
T ss_dssp CCEEEEEECCCCTTHHHHHHHHHHHHEEEEE
T ss_pred ceEEEEEEeccCChhHHHHHHHHHHhccCCC
Confidence 3689888766643 34666777888883
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=95.57 E-value=0.021 Score=48.69 Aligned_cols=72 Identities=21% Similarity=0.200 Sum_probs=48.1
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|||+|+ |.+|...++.+... |+ +|+++++++++.+.+...+.. ++..+-.+. +.+.+... ++|+||.+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~l~~~~~~-~~~~D~~d~---~~l~~~~~-~~d~vi~~a~ 75 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPAS-QIIAIVRNVEKASTLADQGVE-VRHGDYNQP---ESLQKAFA-GVSKLLFISG 75 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTTHHHHHTTCE-EEECCTTCH---HHHHHHTT-TCSEEEECCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCC-eEEEEEcCHHHHhHHhhcCCe-EEEeccCCH---HHHHHHHh-cCCEEEEcCC
Confidence 5899988 99999988877777 87 899998888776555444443 222221112 23444333 5999999987
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 76 ~ 76 (287)
T 2jl1_A 76 P 76 (287)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=95.52 E-value=0.0074 Score=52.98 Aligned_cols=95 Identities=20% Similarity=0.179 Sum_probs=64.1
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHhc----CCCE--EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKNF----GVTE--FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~~----ga~~--~i~~~~~~~~~~~~v~ 258 (291)
+.....++++++||-+|+|. |..+..+++..+ ..+|++++.+++.++.+++. |.+. ++..+. .+ ...
T Consensus 67 l~~~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~--~~---~~~ 140 (317)
T 1dl5_A 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDG--YY---GVP 140 (317)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCG--GG---CCG
T ss_pred HHHhcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECCh--hh---ccc
Confidence 44556788999999999877 888888888765 24799999999988877643 4332 221111 01 010
Q ss_pred hhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+.||+|+....-......+.+.|+++
T Consensus 141 --~~~~fD~Iv~~~~~~~~~~~~~~~Lkpg 168 (317)
T 1dl5_A 141 --EFSPYDVIFVTVGVDEVPETWFTQLKEG 168 (317)
T ss_dssp --GGCCEEEEEECSBBSCCCHHHHHHEEEE
T ss_pred --cCCCeEEEEEcCCHHHHHHHHHHhcCCC
Confidence 1247999998766544456778889888
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.032 Score=47.35 Aligned_cols=80 Identities=18% Similarity=0.084 Sum_probs=48.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEE-EcCChhhHHHH----HhcCCCE-EeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIG-IDIDPKKFDRA----KNFGVTE-FVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~-~~~~~~~~~~~----~~~ga~~-~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
.++++||+|+ +++|...++.+...|+ +|++ ..++.++.+.. ++.+... ++..+- +..++.+.+.+.. .+
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHG 103 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3578999987 9999999988888999 6655 55665544332 2233322 222221 1233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|+++|.
T Consensus 104 ~id~li~nAg~ 114 (267)
T 4iiu_A 104 AWYGVVSNAGI 114 (267)
T ss_dssp CCSEEEECCCC
T ss_pred CccEEEECCCC
Confidence 79999999883
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=95.51 E-value=0.082 Score=46.03 Aligned_cols=45 Identities=29% Similarity=0.291 Sum_probs=39.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
..+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 53 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGK-RVAIWNRSPGKAAALVAAGA 53 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHCCC
Confidence 3579999999999998888888998 89999999999888777665
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=95.49 E-value=0.0061 Score=52.12 Aligned_cols=75 Identities=23% Similarity=0.228 Sum_probs=47.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
.++++||+|+ +++|.+.++.+...|+ +|+.++++.++.+....+ ..+..+ .....+.+.+.. .+++|++|+
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~----~~Dv~~-~~~~~~~~~~~~~~~g~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGA-RVAVADRAVAGIAADLHL----PGDLRE-AAYADGLPGAVAAGLGRLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECSSCCTTSCCSEEC----CCCTTS-HHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHhhhcc----CcCCCC-HHHHHHHHHHHHHhcCCCCEEEE
Confidence 4688999987 9999999988888999 899998876643211111 111111 122222222221 147999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.|.
T Consensus 101 nAg~ 104 (266)
T 3uxy_A 101 NAGV 104 (266)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9884
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=95.49 E-value=0.034 Score=48.84 Aligned_cols=69 Identities=30% Similarity=0.379 Sum_probs=45.0
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.++.+|||+|+ |.+|...++.+...|+ +|+++++++++ .+...+. |..+ . +.+.++.. ++|+||.
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~------~~~~~~~~Dl~d--~---~~~~~~~~-~~d~vih 83 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGR-TVRGFDLRPSG------TGGEEVVGSLED--G---QALSDAIM-GVSAVLH 83 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTC-CEEEEESSCCS------SCCSEEESCTTC--H---HHHHHHHT-TCSEEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCC-EEEEEeCCCCC------CCccEEecCcCC--H---HHHHHHHh-CCCEEEE
Confidence 35678999998 9999999999989998 89998888765 2232222 2221 2 22333222 6999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+.+.
T Consensus 84 ~A~~ 87 (347)
T 4id9_A 84 LGAF 87 (347)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 8874
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.056 Score=46.01 Aligned_cols=68 Identities=16% Similarity=0.250 Sum_probs=50.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|||+|+|.+|...+..+...|+ +|+++++++++.+.+...+...+. .+-. ++ . -.++|+||.+++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~D~~--d~----~---~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGW-RIIGTSRNPDQMEAIRASGAEPLL-WPGE--EP----S---LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTC-EEEEEESCGGGHHHHHHTTEEEEE-SSSS--CC----C---CTTCCEEEECCCC
T ss_pred CcEEEECCcHHHHHHHHHHHHCCC-EEEEEEcChhhhhhHhhCCCeEEE-eccc--cc----c---cCCCCEEEECCCc
Confidence 579999999999999988888898 999999999888777665553332 2211 11 1 2379999999874
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.021 Score=50.05 Aligned_cols=73 Identities=22% Similarity=0.205 Sum_probs=46.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
-+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+.+.+.. .+..+-.+. +.+.+... ++|+||.+++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~l~~~~~~-~~~~Dl~d~---~~~~~~~~-~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGH-DLVLIHRPSSQIQRLAYLEPE-CRVAEMLDH---AGLERALR-GLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECTTSCGGGGGGGCCE-EEECCTTCH---HHHHHHTT-TCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-EEEEEecChHhhhhhccCCeE-EEEecCCCH---HHHHHHHc-CCCEEEECCcc
Confidence 37999998 9999999988888898 899998887654433322332 222221112 23444333 59999999874
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.036 Score=44.98 Aligned_cols=88 Identities=14% Similarity=0.019 Sum_probs=60.5
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE--eCCCCCCchHHHHHHhhcCCCccE
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF--VNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~--i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
..+.++.+||-+|+|. |..+..+++. +. +++++|.+++.++.+++.+...+ +..+. .+ + ...+.||+
T Consensus 42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~-~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~--~~----~--~~~~~~D~ 110 (218)
T 3ou2_A 42 RAGNIRGDVLELASGT-GYWTRHLSGL-AD-RVTALDGSAEMIAEAGRHGLDNVEFRQQDL--FD----W--TPDRQWDA 110 (218)
T ss_dssp TTTTSCSEEEEESCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHGGGCCTTEEEEECCT--TS----C--CCSSCEEE
T ss_pred hcCCCCCeEEEECCCC-CHHHHHHHhc-CC-eEEEEeCCHHHHHHHHhcCCCCeEEEeccc--cc----C--CCCCceeE
Confidence 3467788999999876 7777788877 77 99999999999999988653221 21111 11 0 22348999
Q ss_pred EEEcCC-----C---hHHHHHHHHHhhcc
Q 022865 268 SFECIG-----N---VSVMRAALECCHKV 288 (291)
Q Consensus 268 v~d~~g-----~---~~~~~~~~~~l~~~ 288 (291)
|+.... . ...++.+.+.|+++
T Consensus 111 v~~~~~l~~~~~~~~~~~l~~~~~~L~pg 139 (218)
T 3ou2_A 111 VFFAHWLAHVPDDRFEAFWESVRSAVAPG 139 (218)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCC
Confidence 986532 2 45577778888887
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.024 Score=49.22 Aligned_cols=74 Identities=19% Similarity=0.248 Sum_probs=46.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC-CCchHHHHHHhhcCCCccEEE
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD-HDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~v~~~~~gg~d~v~ 269 (291)
-++..+|||+|+ |.+|...++.+...|+ +|+++++++++ +. ++. ..+..+- +...+.+.+.. +++|+||
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~-~V~~~~r~~~~-~~---l~~-~~~~~Dl~d~~~~~~~~~~---~~~d~vi 79 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNV-EVFGTSRNNEA-KL---PNV-EMISLDIMDSQRVKKVISD---IKPDYIF 79 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCTTC-CC---TTE-EEEECCTTCHHHHHHHHHH---HCCSEEE
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCC-EEEEEecCCcc-cc---cee-eEEECCCCCHHHHHHHHHh---cCCCEEE
Confidence 456789999988 9999999988888898 89999887664 21 222 2222221 11223333322 2699999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+++.
T Consensus 80 h~A~~ 84 (321)
T 2pk3_A 80 HLAAK 84 (321)
T ss_dssp ECCSC
T ss_pred EcCcc
Confidence 99884
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=95.45 E-value=0.031 Score=49.33 Aligned_cols=76 Identities=16% Similarity=0.132 Sum_probs=47.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-Hhc--CC-CEEeCCCCCC-chHHHHHHhhcCCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNF--GV-TEFVNPKDHD-KPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~--ga-~~~i~~~~~~-~~~~~~v~~~~~gg~d~v 268 (291)
+.+|||+|+ |.+|...++.+...|+ +|++++++.++.+.+ ..+ +. -..+..+-.+ ..+.+.+... ++|+|
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~v 84 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIV 84 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-eEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEE
Confidence 568999998 9999999988888898 899998876543222 211 11 1222222111 2233333222 58999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
|.+++.
T Consensus 85 ih~A~~ 90 (357)
T 1rkx_A 85 FHMAAQ 90 (357)
T ss_dssp EECCSC
T ss_pred EECCCC
Confidence 999883
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.45 E-value=0.06 Score=46.31 Aligned_cols=74 Identities=22% Similarity=0.291 Sum_probs=47.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh------hhHHHHH---hcCCCEEeCCCCCCchHHHHHHhhcCCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRAK---NFGVTEFVNPKDHDKPIQQVLVDLTDGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~------~~~~~~~---~~ga~~~i~~~~~~~~~~~~v~~~~~gg 264 (291)
..+|+|+|+ |.+|...+..+...|. +|++++++. ++.+.++ ..++. ++..+-.+. +.+.+... +
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d~---~~l~~~~~-~ 77 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVRESTASSNSEKAQLLESFKASGAN-IVHGSIDDH---ASLVEAVK-N 77 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCCTTTTHHHHHHHHHHHTTTCE-EECCCTTCH---HHHHHHHH-T
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCC-CEEEEECCcccccCHHHHHHHHHHHhCCCE-EEEeccCCH---HHHHHHHc-C
Confidence 357999998 9999999988888897 888888863 3443333 23443 332222112 22333222 5
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+||.+++.
T Consensus 78 ~d~vi~~a~~ 87 (308)
T 1qyc_A 78 VDVVISTVGS 87 (308)
T ss_dssp CSEEEECCCG
T ss_pred CCEEEECCcc
Confidence 9999999885
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=95.43 E-value=0.02 Score=47.03 Aligned_cols=73 Identities=16% Similarity=0.217 Sum_probs=47.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|||+|+ |.+|...++.+...|. +|+++++++++.+... ..-.++..+-.+. +.+.+... ++|+||.++|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~---~~~~~~~~-~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGF-EVTAVVRHPEKIKIEN--EHLKVKKADVSSL---DEVCEVCK-GADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTC-EEEEECSCGGGCCCCC--TTEEEECCCTTCH---HHHHHHHT-TCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCC-EEEEEEcCcccchhcc--CceEEEEecCCCH---HHHHHHhc-CCCEEEEeCcC
Confidence 58999997 9999999999988998 9999999987643211 1112222221112 23333332 59999999886
Q ss_pred h
Q 022865 275 V 275 (291)
Q Consensus 275 ~ 275 (291)
.
T Consensus 78 ~ 78 (227)
T 3dhn_A 78 G 78 (227)
T ss_dssp -
T ss_pred C
Confidence 3
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=95.42 E-value=0.035 Score=46.42 Aligned_cols=96 Identities=17% Similarity=0.208 Sum_probs=61.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc----
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---- 261 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~---- 261 (291)
...++++||-+|+|. |..++.+++.+. ..+|++++.+++..+.+++ .|....+.... .+..+.+..+.
T Consensus 67 ~~~~~~~VLeiG~G~-G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~--gda~~~l~~l~~~~~ 143 (237)
T 3c3y_A 67 KLVNAKKTIEVGVFT-GYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIE--SDAMLALDNLLQGQE 143 (237)
T ss_dssp HHTTCCEEEEECCTT-SHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHSTT
T ss_pred HhhCCCEEEEeCCCC-CHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhccC
Confidence 345678999998865 778888898874 3499999999998887764 34432111111 12223333331
Q ss_pred -CCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 262 -DGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 262 -~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
.+.||+||-.... ...++.+.+.|++||
T Consensus 144 ~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG 175 (237)
T 3c3y_A 144 SEGSYDFGFVDADKPNYIKYHERLMKLVKVGG 175 (237)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE
T ss_pred CCCCcCEEEECCchHHHHHHHHHHHHhcCCCe
Confidence 3479988854432 355788888899883
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=95.40 E-value=0.017 Score=51.21 Aligned_cols=92 Identities=17% Similarity=0.090 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------CEEeCCCCCCchHHHHHHhhcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---------~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.++.+||.+|+|. |..+..+++..+..+|++++.+++-++.+++.-. ..-+.. .+..+.+.....+
T Consensus 119 ~~~~~VLdIG~G~-G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~----~D~~~~l~~~~~~ 193 (334)
T 1xj5_A 119 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKNAAEG 193 (334)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHTSCTT
T ss_pred CCCCEEEEECCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEE----CCHHHHHHhccCC
Confidence 4568999998765 6677788877655599999999998888875321 111111 2333344433334
Q ss_pred CccEEEEcCC----------ChHHHHHHHHHhhccC
Q 022865 264 GVDYSFECIG----------NVSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~d~~g----------~~~~~~~~~~~l~~~g 289 (291)
.||+|+-... ....++.+.+.|+++|
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG 229 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGG 229 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEE
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCc
Confidence 7998885322 2466888888999883
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.017 Score=47.52 Aligned_cols=97 Identities=19% Similarity=0.160 Sum_probs=61.9
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcC--
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTD-- 262 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~-- 262 (291)
....++.+||=+|+|. |..++.+++.++ ..+|+++|.+++.++.+++ .+....+.... .+..+.+..+..
T Consensus 60 ~~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 60 VKLMQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRL--SPAKDTLAELIHAG 136 (225)
T ss_dssp HHHHTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHTTT
T ss_pred HHhhCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEe--CCHHHHHHHhhhcc
Confidence 3445778999999876 888888988764 4499999999998877764 34332111111 122233333321
Q ss_pred --CCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 263 --GGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 263 --gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
+.||+||-.... ...++.+.+.|+++|
T Consensus 137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG 168 (225)
T 3tr6_A 137 QAWQYDLIYIDADKANTDLYYEESLKLLREGG 168 (225)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEE
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHhcCCCc
Confidence 479988854432 345778888899883
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.39 E-value=0.11 Score=45.51 Aligned_cols=45 Identities=27% Similarity=0.598 Sum_probs=40.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~ga 240 (291)
.+|.|+|.|.+|...++.++..|.. +|++.++++++++.+.+.|.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~ 79 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI 79 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC
Confidence 5899999999999999888888864 79999999999998888876
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=95.39 E-value=0.0098 Score=52.50 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=47.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh----HHHHHhc------CCC-EEeCCCC-CCchHHHHHHhhc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK----FDRAKNF------GVT-EFVNPKD-HDKPIQQVLVDLT 261 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~----~~~~~~~------ga~-~~i~~~~-~~~~~~~~v~~~~ 261 (291)
++++||+|+ |++|...+..+...|+ +|+.+.++.++ .+..++. +.. ..+..+- +..++.+.+.+..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~-~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPS-QSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTT-CCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-ceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 567899988 9999999988888898 56555443322 2222222 122 2222221 2234444555544
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+.+|++|++.|.
T Consensus 81 ~g~iD~lVnnAG~ 93 (327)
T 1jtv_A 81 EGRVDVLVCNAGL 93 (327)
T ss_dssp TSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 4589999999873
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.014 Score=47.81 Aligned_cols=71 Identities=13% Similarity=0.139 Sum_probs=48.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|||+|+ |.+|...++.+...|+ +|+++++++++.+.. -+. .++..+-. +..+.+.+... ++|+||+++|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~--~~~-~~~~~D~~--d~~~~~~~~~~-~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDY-QIYAGARKVEQVPQY--NNV-KAVHFDVD--WTPEEMAKQLH-GMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSC-EEEEEESSGGGSCCC--TTE-EEEECCTT--SCHHHHHTTTT-TCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCccchhhc--CCc-eEEEeccc--CCHHHHHHHHc-CCCEEEECCcC
Confidence 6899987 9999999988888898 999999998765322 111 22322211 11234554443 69999999985
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=95.37 E-value=0.046 Score=48.83 Aligned_cols=34 Identities=29% Similarity=0.419 Sum_probs=31.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..++..+...|..+++.+|.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 5789999999999999999999999999999875
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=95.35 E-value=0.045 Score=47.47 Aligned_cols=44 Identities=20% Similarity=0.225 Sum_probs=37.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.+|.|+|.|.+|...++.+...|. +|++.++++++.+.+.+.|+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 59 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPG-GVTVYDIRIEAMTPLAEAGA 59 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTT-CEEEECSSTTTSHHHHHTTC
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCC
Confidence 479999999999988888888898 89999999998887776664
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=95.34 E-value=0.044 Score=47.39 Aligned_cols=69 Identities=20% Similarity=0.164 Sum_probs=46.9
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|||+|+ |.+|...++.+...|. +|+++++++.+.+ +. +. .++..+ -. .+.+.+... ++|+||.+++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-~~--~~-~~~~~D---l~-~~~~~~~~~-~~d~Vih~a~~ 72 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGN-TPIILTRSIGNKA-IN--DY-EYRVSD---YT-LEDLINQLN-DVDAVVHLAAT 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCC--------CC-EEEECC---CC-HHHHHHHTT-TCSEEEECCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCC-EEEEEeCCCCccc-CC--ce-EEEEcc---cc-HHHHHHhhc-CCCEEEEcccc
Confidence 58999997 9999999999989998 8999988865544 32 33 223222 12 344555443 79999999874
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.33 E-value=0.09 Score=45.79 Aligned_cols=74 Identities=18% Similarity=0.293 Sum_probs=51.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+|.|+|+|.+|...+..+...|. +|+++++++++.+.+.+.|... . .+..+.+. .+|+||.|+..+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~~---~----~~~~~~~~-----~~DvVi~av~~~ 97 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGH-TVTVWNRTAEKCDLFIQEGARL---G----RTPAEVVS-----TCDITFACVSDP 97 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSGGGGHHHHHTTCEE---C----SCHHHHHH-----HCSEEEECCSSH
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHcCCEE---c----CCHHHHHh-----cCCEEEEeCCCH
Confidence 469999999999998888888898 7999999998887777666421 1 11222222 367777777755
Q ss_pred HHHHHHH
Q 022865 276 SVMRAAL 282 (291)
Q Consensus 276 ~~~~~~~ 282 (291)
..+...+
T Consensus 98 ~~~~~v~ 104 (316)
T 2uyy_A 98 KAAKDLV 104 (316)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5455444
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=95.32 E-value=0.073 Score=45.70 Aligned_cols=74 Identities=23% Similarity=0.288 Sum_probs=48.3
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcC-CCeEEEEcCChhhHH--HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAG-ASRVIGIDIDPKKFD--RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~--~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
.++|||+|+ |.+|...++.+...| . +|+++++++++.. .+...+.. ++..+-.+. +.+.+... ++|+||.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-~V~~~~R~~~~~~~~~l~~~~~~-~~~~D~~d~---~~l~~~~~-~~d~vi~ 78 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTF-KVRVVTRNPRKKAAKELRLQGAE-VVQGDQDDQ---VIMELALN-GAYATFI 78 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSS-EEEEEESCTTSHHHHHHHHTTCE-EEECCTTCH---HHHHHHHT-TCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCc-eEEEEEcCCCCHHHHHHHHCCCE-EEEecCCCH---HHHHHHHh-cCCEEEE
Confidence 468999998 999999988887778 7 8999988876542 22334543 332221112 22333332 5999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+++.
T Consensus 79 ~a~~ 82 (299)
T 2wm3_A 79 VTNY 82 (299)
T ss_dssp CCCH
T ss_pred eCCC
Confidence 9874
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.08 Score=43.93 Aligned_cols=88 Identities=16% Similarity=0.152 Sum_probs=60.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
++++.+||=+|+|. |..+..+++. |+ +|+++|.+++.++.+++. -.++.. +..+.+..+..+.||+|+..
T Consensus 39 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~~~~a~~~--~~~~~~-----d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 39 FKGCRRVLDIGCGR-GEFLELCKEE-GI-ESIGVDINEDMIKFCEGK--FNVVKS-----DAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TTTCSCEEEETCTT-THHHHHHHHH-TC-CEEEECSCHHHHHHHHTT--SEEECS-----CHHHHHHTSCTTCBSEEEEE
T ss_pred hcCCCeEEEEeCCC-CHHHHHHHhC-CC-cEEEEECCHHHHHHHHhh--cceeec-----cHHHHhhhcCCCCeeEEEEC
Confidence 56788999998865 5566666665 77 899999999999988875 223322 23333334444589999863
Q ss_pred -----CCC---hHHHHHHHHHhhccCC
Q 022865 272 -----IGN---VSVMRAALECCHKVSG 290 (291)
Q Consensus 272 -----~g~---~~~~~~~~~~l~~~gg 290 (291)
+.. ...+..+.+.|+++ |
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~Lkpg-G 134 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYS-S 134 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTT-C
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCC-c
Confidence 232 36678888889998 5
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=95.31 E-value=0.038 Score=49.10 Aligned_cols=75 Identities=13% Similarity=0.215 Sum_probs=47.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEEc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
..+|||+|+ |.+|...++.+... |+ +|++++++.++.+.+.+...-.++..+-. +.+. +.+... ++|+||.+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~-~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~---~~~~~~-~~d~Vih~ 98 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDW-EVFGMDMQTDRLGDLVKHERMHFFEGDITINKEW---VEYHVK-KCDVILPL 98 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSC-EEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHH---HHHHHH-HCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCC-EEEEEeCChhhhhhhccCCCeEEEeCccCCCHHH---HHHHhc-cCCEEEEc
Confidence 468999997 99999988887777 88 89999998776544332111122322211 1222 222211 59999998
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
++.
T Consensus 99 A~~ 101 (372)
T 3slg_A 99 VAI 101 (372)
T ss_dssp BCC
T ss_pred Ccc
Confidence 874
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.045 Score=50.02 Aligned_cols=84 Identities=17% Similarity=0.215 Sum_probs=49.9
Q ss_pred hcCCCCCCEEEEEcC-ChHHHH--HHHHHHHcCCCeEEEEcCChhh----------------HHHHHhcCCCE-Ee--CC
Q 022865 189 TAKVEPGSIVAVFGL-GTVGLA--VAEGAKAAGASRVIGIDIDPKK----------------FDRAKNFGVTE-FV--NP 246 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~-g~vG~~--ai~~a~~~g~~~v~~~~~~~~~----------------~~~~~~~ga~~-~i--~~ 246 (291)
......++++||+|+ +++|++ .+......|+ +|+.++++.++ .+++++.|... .+ |.
T Consensus 54 ~~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga-~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv 132 (418)
T 4eue_A 54 AIGFRGPKKVLIVGASSGFGLATRISVAFGGPEA-HTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDA 132 (418)
T ss_dssp SCCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCC-EEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCT
T ss_pred cCcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCC-EEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeC
Confidence 344567899999987 999998 4444434488 88888765321 22334556543 22 22
Q ss_pred CCCCchHHHHHHhhc--CCCccEEEEcCCC
Q 022865 247 KDHDKPIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
.+ .++..+.+.+.. .|++|++++++|.
T Consensus 133 td-~~~v~~~v~~i~~~~G~IDiLVnNAG~ 161 (418)
T 4eue_A 133 FS-NETKDKVIKYIKDEFGKIDLFVYSLAA 161 (418)
T ss_dssp TC-HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred CC-HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence 22 233333333322 2479999999886
|
| >1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A | Back alignment and structure |
|---|
Probab=95.29 E-value=0.019 Score=47.72 Aligned_cols=96 Identities=14% Similarity=0.120 Sum_probs=63.2
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--C--EEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--T--EFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga--~--~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....++++++||-+|+|. |..+..+++..|..+|+++|.+++.++.+++... + ..+..+..... ..... .+
T Consensus 68 ~~~~~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~---~~~~~-~~ 142 (230)
T 1fbn_A 68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ---EYANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG---GGTTT-SC
T ss_pred cccCCCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcc---ccccc-Cc
Confidence 344567889999999987 8888899998875599999999998877765321 1 11211111100 00111 24
Q ss_pred CccEEEEcCCCh----HHHHHHHHHhhcc
Q 022865 264 GVDYSFECIGNV----SVMRAALECCHKV 288 (291)
Q Consensus 264 g~d~v~d~~g~~----~~~~~~~~~l~~~ 288 (291)
.+|+|+.....+ ..+..+.+.|+++
T Consensus 143 ~~D~v~~~~~~~~~~~~~l~~~~~~Lkpg 171 (230)
T 1fbn_A 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG 171 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE
T ss_pred cEEEEEEecCChhHHHHHHHHHHHhCCCC
Confidence 799999766654 3477888889888
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=95.29 E-value=0.0098 Score=51.36 Aligned_cols=40 Identities=10% Similarity=0.174 Sum_probs=35.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~ 233 (291)
.+++++|+|+|++|.+++..+...|+++|+++.++.++.+
T Consensus 116 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~ 155 (277)
T 3don_A 116 EDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFN 155 (277)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHH
Confidence 5688999999999999999999999988999999887643
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.067 Score=47.71 Aligned_cols=82 Identities=26% Similarity=0.214 Sum_probs=60.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHc-CCCeEEE-EcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~-~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
-+|.|+|.|.+|...+..++.. ++ ++++ .++++++.+.++++|+.. + .++.+.+.+ ..+|+|+.|+.
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~a~~~g~~~---~----~~~~~ll~~---~~~D~V~i~tp 74 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNL-EVHGVFDILAEKREAAAQKGLKI---Y----ESYEAVLAD---EKVDAVLIATP 74 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTE-EEEEEECSSHHHHHHHHTTTCCB---C----SCHHHHHHC---TTCCEEEECSC
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCc-EEEEEEcCCHHHHHHHHhcCCce---e----CCHHHHhcC---CCCCEEEEcCC
Confidence 3789999999998877777666 56 6654 588888888777777631 2 233333432 36999999999
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
+......+.++|+.|
T Consensus 75 ~~~h~~~~~~al~aG 89 (359)
T 3e18_A 75 NDSHKELAISALEAG 89 (359)
T ss_dssp GGGHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHCC
Confidence 988888888888754
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=95.28 E-value=0.1 Score=45.73 Aligned_cols=82 Identities=16% Similarity=0.187 Sum_probs=54.1
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEE-EEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAV-AEGAKAAGASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~a-i~~a~~~g~~~v~-~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|.|+|+|.+|... +..++..+. .++ +.++++++.+. ++++|....+ .++.+.+.+ ..+|+|+.++.
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~~~~-~~vav~d~~~~~~~~~~~~~g~~~~~------~~~~~~l~~---~~~D~V~i~tp 71 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRATGG-EVVSMMSTSAERGAAYATENGIGKSV------TSVEELVGD---PDVDAVYVSTT 71 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHHTTC-EEEEEECSCHHHHHHHHHHTTCSCCB------SCHHHHHTC---TTCCEEEECSC
T ss_pred eEEEEcccHHHHHhhhHHhhcCCC-eEEEEECCCHHHHHHHHHHcCCCccc------CCHHHHhcC---CCCCEEEEeCC
Confidence 58899999999875 533333677 555 56888877644 4567753221 122222221 26999999999
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
+......+.++|+.+
T Consensus 72 ~~~h~~~~~~al~~G 86 (332)
T 2glx_A 72 NELHREQTLAAIRAG 86 (332)
T ss_dssp GGGHHHHHHHHHHTT
T ss_pred hhHhHHHHHHHHHCC
Confidence 887788888887654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=95.28 E-value=0.034 Score=47.10 Aligned_cols=79 Identities=20% Similarity=0.278 Sum_probs=48.0
Q ss_pred CCCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhH--HHH----HhcCCCEEeC-CCC-CCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKF--DRA----KNFGVTEFVN-PKD-HDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~~~--~~~----~~~ga~~~i~-~~~-~~~~~~~~v~~~~- 261 (291)
+++++||+|+ +++|...++.+...|+ +|+.++++.++. +.+ ++.+....+. .+- +..++.+.+.+..
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGA-AVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSC-EEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHH
Confidence 4688999975 4999998888888899 888887765432 222 2334433221 111 1223333333322
Q ss_pred -CCCccEEEEcCC
Q 022865 262 -DGGVDYSFECIG 273 (291)
Q Consensus 262 -~gg~d~v~d~~g 273 (291)
.+++|++|++.|
T Consensus 98 ~~g~id~li~nAg 110 (267)
T 3gdg_A 98 DFGQIDAFIANAG 110 (267)
T ss_dssp HTSCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 247999999988
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=95.27 E-value=0.011 Score=49.16 Aligned_cols=77 Identities=19% Similarity=0.204 Sum_probs=47.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+.++||+|+ |.+|...++.+...|+. +|+++++++++.+....-+. ..+..+- .-.+.+.+... ++|+||++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~~~-~~~~~D~---~d~~~~~~~~~-~~d~vi~~ 91 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNV-NQEVVDF---EKLDDYASAFQ-GHDVGFCC 91 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGC-EEEECCG---GGGGGGGGGGS-SCSEEEEC
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccCCc-eEEecCc---CCHHHHHHHhc-CCCEEEEC
Confidence 3578999987 99999988888888863 68888887764332111122 1221111 01112333332 69999999
Q ss_pred CCCh
Q 022865 272 IGNV 275 (291)
Q Consensus 272 ~g~~ 275 (291)
+|..
T Consensus 92 ag~~ 95 (242)
T 2bka_A 92 LGTT 95 (242)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9863
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=95.25 E-value=0.07 Score=46.35 Aligned_cols=93 Identities=13% Similarity=0.155 Sum_probs=63.3
Q ss_pred hhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC---EEeCCCCCCchHHHHHHh
Q 022865 188 NTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 188 ~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~---~~i~~~~~~~~~~~~v~~ 259 (291)
.... ++++++||-+|+|. |..+..+++..++ +|+++|.+++.++.+++ .+.. .++..+.. ++ .
T Consensus 110 ~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~-----~ 180 (312)
T 3vc1_A 110 DHLGQAGPDDTLVDAGCGR-GGSMVMAHRRFGS-RVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML--DT-----P 180 (312)
T ss_dssp TTSCCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT--SC-----C
T ss_pred HHhccCCCCCEEEEecCCC-CHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh--cC-----C
Confidence 4444 78899999999876 7788888887787 99999999998877764 3322 12222111 10 1
Q ss_pred hcCCCccEEEEc-----CCChHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFEC-----IGNVSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~-----~g~~~~~~~~~~~l~~~g 289 (291)
+..+.||+|+.. .+....+..+.+.|+++|
T Consensus 181 ~~~~~fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG 215 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYVDLHDLFSEHSRFLKVGG 215 (312)
T ss_dssp CCTTCEEEEEEESCGGGSCHHHHHHHHHHHEEEEE
T ss_pred CCCCCEeEEEECCchhhCCHHHHHHHHHHHcCCCc
Confidence 123479999763 334667888889999983
|
| >2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.044 Score=46.60 Aligned_cols=45 Identities=33% Similarity=0.424 Sum_probs=36.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga 240 (291)
++ +++|+|+|.+|...+..+...|+ +|++.+++.++.+ ++++++.
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~-~v~v~~r~~~~~~~l~~~~~~ 161 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGL-EVWVWNRTPQRALALAEEFGL 161 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHHTC
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcc
Confidence 45 89999999999999999989998 8999999987754 4445554
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=95.22 E-value=0.058 Score=43.53 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=46.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCC-chHHHHHHhhcCCCccEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHD-KPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~-~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+++||+|+ |.+|...++.+... +|+++++++++.+.+. +++. ..+..+-.+ .++.+.+.+ .+++|++|++.
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~---~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~a 74 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH---DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAV 74 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS---EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC---CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECC
Confidence 36899988 99998766655444 8999999888766553 3433 333222212 233333433 24799999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 75 g~ 76 (207)
T 2yut_A 75 GK 76 (207)
T ss_dssp CC
T ss_pred Cc
Confidence 84
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=95.22 E-value=0.073 Score=45.76 Aligned_cols=41 Identities=32% Similarity=0.438 Sum_probs=36.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
++|.|+|+|.+|...++.+...|+ +|++.++++++++.+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~-~V~l~d~~~~~~~~~~~ 45 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF-AVTAYDINTDALDAAKK 45 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCHHHHHHHHH
Confidence 579999999999999999989999 99999999998776654
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=95.21 E-value=0.044 Score=46.84 Aligned_cols=94 Identities=13% Similarity=0.109 Sum_probs=61.7
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc-----CCCE--EeCCCCCCchHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF-----GVTE--FVNPKDHDKPIQQVL 257 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~-----ga~~--~i~~~~~~~~~~~~v 257 (291)
+.....++++++||-+|+|. |..+..+++.. ...+|+++|.+++.++.+++. |.+. ++..+. .+
T Consensus 102 ~~~~~~~~~~~~VLD~G~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~--~~----- 173 (275)
T 1yb2_A 102 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDI--AD----- 173 (275)
T ss_dssp ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCT--TT-----
T ss_pred HHHHcCCCCcCEEEEecCCC-CHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECch--hc-----
Confidence 34556778999999999874 77888888874 233999999999988887653 4322 222111 00
Q ss_pred HhhcCCCccEEEEcCCCh-HHHHHHHHHhhcc
Q 022865 258 VDLTDGGVDYSFECIGNV-SVMRAALECCHKV 288 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~~-~~~~~~~~~l~~~ 288 (291)
....+.||+|+-....+ ..++.+.+.|+++
T Consensus 174 -~~~~~~fD~Vi~~~~~~~~~l~~~~~~Lkpg 204 (275)
T 1yb2_A 174 -FISDQMYDAVIADIPDPWNHVQKIASMMKPG 204 (275)
T ss_dssp -CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE
T ss_pred -cCcCCCccEEEEcCcCHHHHHHHHHHHcCCC
Confidence 11223799988766654 5678888888888
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.025 Score=46.55 Aligned_cols=91 Identities=20% Similarity=0.168 Sum_probs=62.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc----C-----CC--EEeCCCCCCchHHHHHH
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----G-----VT--EFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~----g-----a~--~~i~~~~~~~~~~~~v~ 258 (291)
.++++++||-+|+|. |..+..+++..|. .+|+++|.+++.++.+++. + .+ .++..+. .. .
T Consensus 74 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~--~~---~-- 145 (226)
T 1i1n_A 74 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG--RM---G-- 145 (226)
T ss_dssp TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG--GG---C--
T ss_pred hCCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCc--cc---C--
Confidence 367899999999876 8888889988763 2899999999988877542 2 11 1221111 00 0
Q ss_pred hhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 259 DLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 259 ~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
....+.||+|+........+..+.+.|+++|
T Consensus 146 ~~~~~~fD~i~~~~~~~~~~~~~~~~LkpgG 176 (226)
T 1i1n_A 146 YAEEAPYDAIHVGAAAPVVPQALIDQLKPGG 176 (226)
T ss_dssp CGGGCCEEEEEECSBBSSCCHHHHHTEEEEE
T ss_pred cccCCCcCEEEECCchHHHHHHHHHhcCCCc
Confidence 0112479999887666666788889999983
|
| >3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.13 Score=42.79 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=51.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+.+|||+|+|.+|...+..+...|+ +|++++.... .++.+.+.+.-..+.-.. .+. .+ .++|+||-++
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA-~VtVvap~~~~~l~~l~~~~~i~~i~~~~-~~~------dL--~~adLVIaAT 99 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGA-AITVVAPTVSAEINEWEAKGQLRVKRKKV-GEE------DL--LNVFFIVVAT 99 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCC-CEEEECSSCCHHHHHHHHTTSCEEECSCC-CGG------GS--SSCSEEEECC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCCHHHHHHHHcCCcEEEECCC-CHh------Hh--CCCCEEEECC
Confidence 46789999999999999999999999 7888765442 233222323222332211 111 11 2699999999
Q ss_pred CChHHHHHHHHHhh
Q 022865 273 GNVSVMRAALECCH 286 (291)
Q Consensus 273 g~~~~~~~~~~~l~ 286 (291)
+.+. .+..+...+
T Consensus 100 ~d~~-~N~~I~~~a 112 (223)
T 3dfz_A 100 NDQA-VNKFVKQHI 112 (223)
T ss_dssp CCTH-HHHHHHHHS
T ss_pred CCHH-HHHHHHHHH
Confidence 9876 444444433
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.21 E-value=0.14 Score=45.67 Aligned_cols=45 Identities=16% Similarity=0.370 Sum_probs=38.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
..+|.|+|.|.+|...+..+...|. .|++.++++++.+.+.+.|+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~-~V~v~dr~~~~~~~l~~~g~ 66 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGH-ECVVYDLNVNAVQALEREGI 66 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTTC
T ss_pred CCEEEEECchHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHHCCC
Confidence 3579999999999998888888998 99999999999888776654
|
| >1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A* | Back alignment and structure |
|---|
Probab=95.21 E-value=0.07 Score=48.02 Aligned_cols=35 Identities=23% Similarity=0.352 Sum_probs=32.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+..+|+|+|+|..|..+++++..+|.++|+.+|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 56789999999999999999999999899999998
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=95.18 E-value=0.035 Score=53.35 Aligned_cols=79 Identities=20% Similarity=0.194 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC---------ChhhHHH----HHhcCCCEEeCCCCCCchHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI---------DPKKFDR----AKNFGVTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~---------~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~v~~ 259 (291)
.++++||+|+ +++|.+.+..+...|+ +|+++++ +.++++. .++.+.....+..+ ..+..+.+.+
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga-~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d-~~~~~~~~~~ 95 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGA-KVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNS-VIDGAKVIET 95 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEC--------------CHHHHHHHHHHTTCCEEECCCC-GGGHHHHHC-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCC-HHHHHHHHHH
Confidence 4688999987 9999999988888999 8888866 4443332 23445555555543 2334444444
Q ss_pred hcC--CCccEEEEcCCC
Q 022865 260 LTD--GGVDYSFECIGN 274 (291)
Q Consensus 260 ~~~--gg~d~v~d~~g~ 274 (291)
... +++|++|+++|.
T Consensus 96 ~~~~~g~iDiLVnnAGi 112 (613)
T 3oml_A 96 AIKAFGRVDILVNNAGI 112 (613)
T ss_dssp ---------CEECCCCC
T ss_pred HHHHCCCCcEEEECCCC
Confidence 332 379999999884
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=95.15 E-value=0.035 Score=48.76 Aligned_cols=93 Identities=17% Similarity=0.069 Sum_probs=58.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-------EEeCCCCCCchHHHHHHhhcCCCc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-------EFVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-------~~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
.++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-.. .-+.... .+..+.+.. ..+.|
T Consensus 107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~--~D~~~~l~~-~~~~f 182 (314)
T 2b2c_A 107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFC--GDGFEFLKN-HKNEF 182 (314)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEEC--SCHHHHHHH-CTTCE
T ss_pred CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEE--ChHHHHHHh-cCCCc
Confidence 3457999998765 66777788766555999999999999988764211 0011111 223333433 33479
Q ss_pred cEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 266 DYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 266 d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
|+|+-.... ...++.+.+.|+++|
T Consensus 183 D~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG 216 (314)
T 2b2c_A 183 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDG 216 (314)
T ss_dssp EEEEECCC-------------HHHHHHHHEEEEE
T ss_pred eEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCe
Confidence 988854321 456778888888883
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=95.09 E-value=0.031 Score=52.66 Aligned_cols=71 Identities=23% Similarity=0.198 Sum_probs=45.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
.+++++|+|+|++|.+++..+...|+ +|+.++++.++.+.+ ++++.. ++...+ +.++....+|++++++
T Consensus 363 ~~k~vlV~GaGGig~aia~~L~~~G~-~V~i~~R~~~~a~~la~~~~~~-~~~~~d--------l~~~~~~~~DilVN~a 432 (523)
T 2o7s_A 363 ASKTVVVIGAGGAGKALAYGAKEKGA-KVVIANRTYERALELAEAIGGK-ALSLTD--------LDNYHPEDGMVLANTT 432 (523)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHHCC--CEEEESSHHHHHHHHHHTTC--CEETTT--------TTTC--CCSEEEEECS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCc-eeeHHH--------hhhccccCceEEEECC
Confidence 45689999999999999999999999 898898988776544 455532 222211 1111112478999988
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 433 gv 434 (523)
T 2o7s_A 433 SM 434 (523)
T ss_dssp ST
T ss_pred CC
Confidence 73
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=95.07 E-value=0.056 Score=45.32 Aligned_cols=70 Identities=27% Similarity=0.370 Sum_probs=44.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+++||+|+ |.+|...++.+...|+ +|+++++++++++. ....|..+ ..++.+.+.++ .+++|++|++.|.
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~------~~~~Dl~~-~~~v~~~~~~~-~~~id~lv~~Ag~ 72 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDAEVIA------DLSTAEGR-KQAIADVLAKC-SKGMDGLVLCAGL 72 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHHH-HHHHHHHHTTC-TTCCSEEEECCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCchhhcc------ccccCCCC-HHHHHHHHHHh-CCCCCEEEECCCC
Confidence 47899988 9999999988888999 89999888764321 10000000 01222222222 2478999999885
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=95.06 E-value=0.0035 Score=50.07 Aligned_cols=92 Identities=14% Similarity=0.197 Sum_probs=59.5
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHHhhcC
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~~~~~ 262 (291)
...++++++||=+|+|. |..+..+++. +. +|+++|.+++.++.+++ .+.+. ++. .+ ... +.....
T Consensus 17 ~~~~~~~~~vLDiGcG~-G~~~~~la~~-~~-~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~-~~~----l~~~~~ 87 (185)
T 3mti_A 17 AEVLDDESIVVDATMGN-GNDTAFLAGL-SK-KVYAFDVQEQALGKTSQRLSDLGIENTELIL-DG-HEN----LDHYVR 87 (185)
T ss_dssp HTTCCTTCEEEESCCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SC-GGG----GGGTCC
T ss_pred HHhCCCCCEEEEEcCCC-CHHHHHHHHh-CC-EEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-Cc-HHH----HHhhcc
Confidence 34567899999888876 7888888877 66 99999999998877754 33322 222 11 111 222334
Q ss_pred CCccEEEEcCCC-----------h----HHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIGN-----------V----SVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g~-----------~----~~~~~~~~~l~~~g 289 (291)
+.||+|+-..+- . ..+..+.+.|+++|
T Consensus 88 ~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 129 (185)
T 3mti_A 88 EPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGG 129 (185)
T ss_dssp SCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEE
T ss_pred CCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCc
Confidence 479988765321 1 33577778888883
|
| >1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A* | Back alignment and structure |
|---|
Probab=95.05 E-value=0.07 Score=41.36 Aligned_cols=92 Identities=17% Similarity=0.188 Sum_probs=57.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc-CCCccEE
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DGGVDYS 268 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~-~gg~d~v 268 (291)
.++++++||-+|+|. |..+..+++..|. .+++++|.++ ..+. ..-.++..+.......+.+.... .+.+|+|
T Consensus 19 ~~~~~~~vLd~G~G~-G~~~~~l~~~~~~~~~v~~~D~~~-~~~~----~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i 92 (180)
T 1ej0_A 19 LFKPGMTVVDLGAAP-GGWSQYVVTQIGGKGRIIACDLLP-MDPI----VGVDFLQGDFRDELVMKALLERVGDSKVQVV 92 (180)
T ss_dssp CCCTTCEEEEESCTT-CHHHHHHHHHHCTTCEEEEEESSC-CCCC----TTEEEEESCTTSHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCeEEEeCCCC-CHHHHHHHHHhCCCCeEEEEECcc-cccc----CcEEEEEcccccchhhhhhhccCCCCceeEE
Confidence 367889999999877 8888888888642 3999999887 3322 11122222221222222333323 3489999
Q ss_pred EE-----cCCC------------hHHHHHHHHHhhcc
Q 022865 269 FE-----CIGN------------VSVMRAALECCHKV 288 (291)
Q Consensus 269 ~d-----~~g~------------~~~~~~~~~~l~~~ 288 (291)
+. ..+. ...+..+.+.|+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~g 129 (180)
T 1ej0_A 93 MSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPG 129 (180)
T ss_dssp EECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred EECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCC
Confidence 97 3333 36677888888888
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.04 E-value=0.053 Score=44.90 Aligned_cols=72 Identities=18% Similarity=0.221 Sum_probs=46.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC-CCchHHHHHHhhc-CCCccEEEEc
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD-HDKPIQQVLVDLT-DGGVDYSFEC 271 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~-~~~~~~~~v~~~~-~gg~d~v~d~ 271 (291)
++++||+|+ |.+|...++.+...|+ +|++++++++ . .++ ..+..+- +..++.+.+.+.. .+++|++|++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~-~V~~~~r~~~-~---~~~---~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGY-RVVVLDLRRE-G---EDL---IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCC-S---SSS---EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEccCcc-c---cce---EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 568999988 9999998888888898 8999888765 1 111 2222221 1233333343331 1379999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 74 ag~ 76 (242)
T 1uay_A 74 AGV 76 (242)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.095 Score=46.36 Aligned_cols=45 Identities=24% Similarity=0.458 Sum_probs=38.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.+.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|.
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~ 193 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNM-RILYYSRTRKE-EVERELNA 193 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCH-HHHHHHCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCC-EEEEECCCcch-hhHhhcCc
Confidence 46789999999999999999999998 89999998877 55555554
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=95.03 E-value=0.083 Score=46.00 Aligned_cols=92 Identities=14% Similarity=0.067 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC---------CCEEeCCCCCCchHHHHHHhhcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG---------VTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g---------a~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.- ....+.. .+..+.+.....+
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~~~~~~~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRV----GDGLAFVRQTPDN 168 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHSSCTT
T ss_pred CCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE----CcHHHHHHhccCC
Confidence 5678999998865 667777777665569999999999888887532 0111111 1233333322344
Q ss_pred CccEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 264 GVDYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
.||+|+-.... ...++.+.+.|+++|
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG 204 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDG 204 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCc
Confidence 89988854321 356788888898883
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=95.03 E-value=0.078 Score=45.98 Aligned_cols=73 Identities=12% Similarity=0.204 Sum_probs=47.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh------hhHHHH---HhcCCCEEeCCCCCCchHHHHHHhhcCCCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP------KKFDRA---KNFGVTEFVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~------~~~~~~---~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
.+|+|+|+ |.+|...+..+...|+ +|++++++. ++.+.+ ...++. ++..+-.+. +.+.+... ++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~-~v~~D~~d~---~~l~~a~~-~~ 78 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSH-PTFIYARPLTPDSTPSSVQLREEFRSMGVT-IIEGEMEEH---EKMVSVLK-QV 78 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECCCCTTCCHHHHHHHHHHHHTTCE-EEECCTTCH---HHHHHHHT-TC
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCC-cEEEEECCcccccChHHHHHHHHhhcCCcE-EEEecCCCH---HHHHHHHc-CC
Confidence 57999998 9999999988888898 888888875 343333 233443 332221112 23333332 59
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+||.+++.
T Consensus 79 d~vi~~a~~ 87 (321)
T 3c1o_A 79 DIVISALPF 87 (321)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCCc
Confidence 999999885
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.02 E-value=0.078 Score=52.55 Aligned_cols=82 Identities=16% Similarity=0.236 Sum_probs=54.4
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHH-HcCCCeEEEEcCChh---h----HHHHHhcCCCEEe---CCCCCCchHHHHHHh
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAK-AAGASRVIGIDIDPK---K----FDRAKNFGVTEFV---NPKDHDKPIQQVLVD 259 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~-~~g~~~v~~~~~~~~---~----~~~~~~~ga~~~i---~~~~~~~~~~~~v~~ 259 (291)
+.+++++||.|+ |++|...++.+. ..|+++|+.++++.. + .+.+++.|....+ |.. +.+++.+.+.+
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvs-d~~~v~~~~~~ 605 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVA-DRETLAKVLAS 605 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTT-CHHHHHHHHHT
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecC-CHHHHHHHHHH
Confidence 467889999987 999999887775 789977888888732 2 2233445764322 222 22445555555
Q ss_pred hcCC-CccEEEEcCCC
Q 022865 260 LTDG-GVDYSFECIGN 274 (291)
Q Consensus 260 ~~~g-g~d~v~d~~g~ 274 (291)
.... ++|++|++.|.
T Consensus 606 ~~~~~~id~lVnnAGv 621 (795)
T 3slk_A 606 IPDEHPLTAVVHAAGV 621 (795)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred HHHhCCCEEEEECCCc
Confidence 4433 79999999884
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.11 Score=45.37 Aligned_cols=76 Identities=21% Similarity=0.173 Sum_probs=46.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh----------hhHHHHHh-cCCC-EEeCCCCCC-chHHHHHHhh
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP----------KKFDRAKN-FGVT-EFVNPKDHD-KPIQQVLVDL 260 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----------~~~~~~~~-~ga~-~~i~~~~~~-~~~~~~v~~~ 260 (291)
+.+|||+|+ |.+|...++.+...|+ +|+++++.. +.++.+++ .+.. ..+..+-.+ ..+.+.+.+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTC-CEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 368999987 9999999888888898 888887532 23333332 2221 222222111 2333333322
Q ss_pred cCCCccEEEEcCCC
Q 022865 261 TDGGVDYSFECIGN 274 (291)
Q Consensus 261 ~~gg~d~v~d~~g~ 274 (291)
++|+||.+++.
T Consensus 81 ---~~d~vih~A~~ 91 (348)
T 1ek6_A 81 ---SFMAVIHFAGL 91 (348)
T ss_dssp ---CEEEEEECCSC
T ss_pred ---CCCEEEECCCC
Confidence 69999999884
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.12 Score=44.30 Aligned_cols=43 Identities=26% Similarity=0.361 Sum_probs=36.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..+...|. +|++.++++++.+.+.+.|.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~ 44 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGY-PLIIYDVFPDACKEFQDAGE 44 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTC-CEEEECSSTHHHHHHHTTTC
T ss_pred eEEEEeccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHcCC
Confidence 58899999999998888878898 89999999998887776654
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=95.00 E-value=0.029 Score=44.45 Aligned_cols=93 Identities=17% Similarity=0.170 Sum_probs=60.8
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCC-CE-EeCCCCCCchHHHHHHhh
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGV-TE-FVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga-~~-~i~~~~~~~~~~~~v~~~ 260 (291)
.....+.++.+||-+|+|. |..+..+++.. . +|+++|.+++..+.+++ .+. +. .+.. .++.+.+...
T Consensus 26 ~~~~~~~~~~~vldiG~G~-G~~~~~l~~~~-~-~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~----~d~~~~~~~~ 98 (192)
T 1l3i_A 26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGRV-R-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME----GDAPEALCKI 98 (192)
T ss_dssp HHHHCCCTTCEEEEESCTT-SHHHHHHHTTS-S-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE----SCHHHHHTTS
T ss_pred HHhcCCCCCCEEEEECCCC-CHHHHHHHHhc-C-EEEEEECCHHHHHHHHHHHHHcCCCcceEEEe----cCHHHhcccC
Confidence 3445678889999999877 88888888766 4 99999999998887765 333 11 1111 1222222211
Q ss_pred cCCCccEEEEcCC---ChHHHHHHHHHhhcc
Q 022865 261 TDGGVDYSFECIG---NVSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g---~~~~~~~~~~~l~~~ 288 (291)
+.+|+|+.... -...+..+.+.|+++
T Consensus 99 --~~~D~v~~~~~~~~~~~~l~~~~~~l~~g 127 (192)
T 1l3i_A 99 --PDIDIAVVGGSGGELQEILRIIKDKLKPG 127 (192)
T ss_dssp --CCEEEEEESCCTTCHHHHHHHHHHTEEEE
T ss_pred --CCCCEEEECCchHHHHHHHHHHHHhcCCC
Confidence 37999986643 145577777778877
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=94.99 E-value=0.028 Score=47.80 Aligned_cols=72 Identities=21% Similarity=0.309 Sum_probs=46.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|||+|+ |.+|...++.+... |+ +|+++++++++.+.+...+.. ++..+-.+. +.+.+... ++|+||.+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~~~~~~-~~~~D~~d~---~~~~~~~~-~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPAS-QIVAIVRNPAKAQALAAQGIT-VRQADYGDE---AALTSALQ-GVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGG-GEEEEESCTTTCHHHHHTTCE-EEECCTTCH---HHHHHHTT-TCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCc-eEEEEEcChHhhhhhhcCCCe-EEEcCCCCH---HHHHHHHh-CCCEEEEeCC
Confidence 4899998 99999988888777 87 899998887765544444443 222221112 23444332 5899999987
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 75 ~ 75 (286)
T 2zcu_A 75 S 75 (286)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=94.98 E-value=0.021 Score=47.19 Aligned_cols=87 Identities=17% Similarity=0.113 Sum_probs=61.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCCCCchHHHHHHhhc-CCCccEEEE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLT-DGGVDYSFE 270 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~-~gg~d~v~d 270 (291)
.++.+||=+|+|. |..+..+++. +. +|+++|.+++.++.+++.... .++..+.. .. .... .+.||+|+.
T Consensus 47 ~~~~~vLDiGcG~-G~~~~~l~~~-~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~-~~-----~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCGH-GPDAARFGPQ-AA-RWAAYDFSPELLKLARANAPHADVYEWNGK-GE-----LPAGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHCTTSEEEECCSC-SS-----CCTTCCCCEEEEEE
T ss_pred CCCCeEEEeCCCC-CHHHHHHHHc-CC-EEEEEECCHHHHHHHHHhCCCceEEEcchh-hc-----cCCcCCCCEEEEEe
Confidence 6788999999865 7777777776 76 999999999999988765321 22222110 00 0112 347999998
Q ss_pred cCCChHHHHHHHHHhhcc
Q 022865 271 CIGNVSVMRAALECCHKV 288 (291)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~ 288 (291)
.......+..+.+.|+++
T Consensus 118 ~~~~~~~l~~~~~~Lkpg 135 (226)
T 3m33_A 118 RRGPTSVILRLPELAAPD 135 (226)
T ss_dssp ESCCSGGGGGHHHHEEEE
T ss_pred CCCHHHHHHHHHHHcCCC
Confidence 877777889999999998
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.012 Score=50.01 Aligned_cols=71 Identities=18% Similarity=0.112 Sum_probs=45.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+++|||+|+ |.+|...++.+...|+ +|+++++++.+.+ ..+. ..+..+-.+. +.+.++.. ++|+||++.|
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~-~V~~~~r~~~~~~---~~~~-~~~~~Dl~d~---~~~~~~~~-~~D~vi~~Ag 73 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAE-ILRLADLSPLDPA---GPNE-ECVQCDLADA---NAVNAMVA-GCDGIVHLGG 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEE-EEEEEESSCCCCC---CTTE-EEEECCTTCH---HHHHHHHT-TCSEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCC-EEEEEecCCcccc---CCCC-EEEEcCCCCH---HHHHHHHc-CCCEEEECCC
Confidence 358999987 9999998888888898 8999988876543 1111 2222221112 22333322 6999999987
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 74 ~ 74 (267)
T 3rft_A 74 I 74 (267)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.036 Score=49.62 Aligned_cols=74 Identities=22% Similarity=0.243 Sum_probs=47.0
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
..+|||+|+ |.+|...++.+...|+ +|+++++++++.......+. .++..+-.+. +.+.++.. ++|+||.+++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~v-~~~~~Dl~d~---~~~~~~~~-~~d~Vih~A~ 102 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHMTEDMFCD-EFHLVDLRVM---ENCLKVTE-GVDHVFNLAA 102 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSSCGGGTCS-EEEECCTTSH---HHHHHHHT-TCSEEEECCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCC-eEEEEECCCccchhhccCCc-eEEECCCCCH---HHHHHHhC-CCCEEEECce
Confidence 468999998 9999999988888898 89999887654322111222 2222221112 22333222 6999999987
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 103 ~ 103 (379)
T 2c5a_A 103 D 103 (379)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=94.95 E-value=0.051 Score=48.15 Aligned_cols=36 Identities=22% Similarity=0.207 Sum_probs=30.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH--cCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKA--AGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~--~g~~~v~~~~~~~~ 230 (291)
.+.+|||+|+ |.+|...+..+.. .|+ +|++++++..
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~-~V~~~~r~~~ 47 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKA-KVVVLDKFRS 47 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTS-EEEEEECCCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCC-eEEEEECCCc
Confidence 4679999988 9999998888887 898 8999987554
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=94.93 E-value=0.057 Score=48.17 Aligned_cols=46 Identities=20% Similarity=0.264 Sum_probs=40.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++....+.+++.|+
T Consensus 163 ~gktvGIIG~G~IG~~vA~~l~~~G~-~V~~~dr~~~~~~~~~~~g~ 208 (351)
T 3jtm_A 163 EGKTIGTVGAGRIGKLLLQRLKPFGC-NLLYHDRLQMAPELEKETGA 208 (351)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCC-EEEEECSSCCCHHHHHHHCC
T ss_pred cCCEEeEEEeCHHHHHHHHHHHHCCC-EEEEeCCCccCHHHHHhCCC
Confidence 57899999999999999999999999 89999988766666666665
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=94.92 E-value=0.17 Score=43.39 Aligned_cols=76 Identities=18% Similarity=0.302 Sum_probs=54.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
.+|.|+|+ |.+|...+..+...|. +|+++++++++.+.+.+.|.+. .+. . +.. ..+|+||.++..
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~----~~~-~-------~~~-~~aDvVi~av~~ 77 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAH-HLAAIEIAPEGRDRLQGMGIPL----TDG-D-------GWI-DEADVVVLALPD 77 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSS-EEEEECCSHHHHHHHHHTTCCC----CCS-S-------GGG-GTCSEEEECSCH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHhcCCCc----CCH-H-------HHh-cCCCEEEEcCCc
Confidence 37999999 9999998888888898 8999999999888877766421 110 1 111 158899998887
Q ss_pred hHHHHHHHHHhh
Q 022865 275 VSVMRAALECCH 286 (291)
Q Consensus 275 ~~~~~~~~~~l~ 286 (291)
.. +...++.+.
T Consensus 78 ~~-~~~v~~~l~ 88 (286)
T 3c24_A 78 NI-IEKVAEDIV 88 (286)
T ss_dssp HH-HHHHHHHHG
T ss_pred hH-HHHHHHHHH
Confidence 55 555555443
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=94.91 E-value=0.092 Score=45.49 Aligned_cols=73 Identities=21% Similarity=0.290 Sum_probs=47.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHHHH---HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFDRA---KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~~~---~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
++|||+|+ |.+|...+..+...|. +|++++++.+ +.+.+ ...++. ++..+-.+. +.+.+... ++|+||.
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~l~R~~~~~~~~~~~l~~~~v~-~v~~Dl~d~---~~l~~a~~-~~d~vi~ 85 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGH-PTYVFTRPNSSKTTLLDEFQSLGAI-IVKGELDEH---EKLVELMK-KVDVVIS 85 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTC-CEEEEECTTCSCHHHHHHHHHTTCE-EEECCTTCH---HHHHHHHT-TCSEEEE
T ss_pred CeEEEECCCchHHHHHHHHHHHCCC-cEEEEECCCCchhhHHHHhhcCCCE-EEEecCCCH---HHHHHHHc-CCCEEEE
Confidence 47999998 9999999998888898 8888888764 44333 234543 332221112 23333332 5999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
+++.
T Consensus 86 ~a~~ 89 (318)
T 2r6j_A 86 ALAF 89 (318)
T ss_dssp CCCG
T ss_pred CCch
Confidence 9884
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=94.91 E-value=0.038 Score=46.28 Aligned_cols=93 Identities=18% Similarity=0.242 Sum_probs=62.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC---EEeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT---EFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~---~~i~~~~~~~~~~~~v~ 258 (291)
+.....+.++.+||-+|+|. |..+..+++..+. +|+++|.+++.++.+++ .|.. .++..+. .+.
T Consensus 28 l~~~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~--~~~----- 98 (256)
T 1nkv_A 28 LGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDA--AGY----- 98 (256)
T ss_dssp HHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCC--TTC-----
T ss_pred HHHhcCCCCCCEEEEECCCC-CHHHHHHHHhcCC-eEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECCh--HhC-----
Confidence 34556678899999999877 8888899988887 99999999988877754 3332 1222111 110
Q ss_pred hhcCCCccEEEEc-----C-CChHHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFEC-----I-GNVSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~-----~-g~~~~~~~~~~~l~~~ 288 (291)
.. .+.||+|+.. . .....+..+.+.|+++
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~Lkpg 133 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPG 133 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCC
Confidence 01 3479999852 1 2345577777888887
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=94.90 E-value=0.05 Score=44.60 Aligned_cols=96 Identities=15% Similarity=0.148 Sum_probs=61.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc---C
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT---D 262 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~---~ 262 (291)
...++.+||-+|+|. |..++.+++.+. ..+|++++.+++.++.+++ .|....+.... .+..+.+..+. .
T Consensus 55 ~~~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~--~d~~~~~~~~~~~~~ 131 (223)
T 3duw_A 55 QIQGARNILEIGTLG-GYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRT--GLALDSLQQIENEKY 131 (223)
T ss_dssp HHHTCSEEEEECCTT-SHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHTTC
T ss_pred HhhCCCEEEEecCCc-cHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEE--cCHHHHHHHHHhcCC
Confidence 456778999999875 888888888873 3399999999998877754 34322111111 12223333322 1
Q ss_pred CCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
+.||+||-.... ...+..+.+.|+++|
T Consensus 132 ~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 132 EPFDFIFIDADKQNNPAYFEWALKLSRPGT 161 (223)
T ss_dssp CCCSEEEECSCGGGHHHHHHHHHHTCCTTC
T ss_pred CCcCEEEEcCCcHHHHHHHHHHHHhcCCCc
Confidence 469988854432 355778888899883
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=94.90 E-value=0.18 Score=43.46 Aligned_cols=74 Identities=19% Similarity=0.276 Sum_probs=50.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
.+|.|+|.|.+|...+..+...|. +|+++++++++.+.+.+.|.. . . .+..+.+. .+|+||.|++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~~~~~~~~~~~~~g~~-~--~----~~~~~~~~-----~~D~vi~~vp~~ 71 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGV-TVYAFDLMEANVAAVVAQGAQ-A--C----ENNQKVAA-----ASDIIFTSLPNA 71 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHTTTCE-E--C----SSHHHHHH-----HCSEEEECCSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHHCCCe-e--c----CCHHHHHh-----CCCEEEEECCCH
Confidence 479999999999988888878898 899999999888777665542 1 1 11222222 267777777655
Q ss_pred HHHHHHH
Q 022865 276 SVMRAAL 282 (291)
Q Consensus 276 ~~~~~~~ 282 (291)
..++..+
T Consensus 72 ~~~~~v~ 78 (301)
T 3cky_A 72 GIVETVM 78 (301)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5444444
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=94.83 E-value=0.078 Score=50.83 Aligned_cols=79 Identities=20% Similarity=0.173 Sum_probs=49.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHHH----HHhcCCCEEeCCCCCC--chHHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFDR----AKNFGVTEFVNPKDHD--KPIQQVL 257 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~---------~~~~~----~~~~ga~~~i~~~~~~--~~~~~~v 257 (291)
.++++||.|+ +++|++.++.+...|+ +|++.+++. ++++. +++.|...+.+..+.. ..+.+.+
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga-~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~ 85 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGA-KVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETA 85 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCC-EEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHH
Confidence 4678899987 9999999998889999 888887643 33332 2334544444444321 1222333
Q ss_pred HhhcCCCccEEEEcCCC
Q 022865 258 VDLTDGGVDYSFECIGN 274 (291)
Q Consensus 258 ~~~~~gg~d~v~d~~g~ 274 (291)
.+.. |++|+++++.|-
T Consensus 86 ~~~~-G~iDiLVnNAGi 101 (604)
T 2et6_A 86 VKNF-GTVHVIINNAGI 101 (604)
T ss_dssp HHHH-SCCCEEEECCCC
T ss_pred HHHc-CCCCEEEECCCC
Confidence 3322 479999999883
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=94.83 E-value=0.084 Score=46.99 Aligned_cols=46 Identities=24% Similarity=0.504 Sum_probs=39.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHH-HcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAK-AAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~-~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|.+|.|+|.|.+|...++.++ ..|. +|++.+++.++.+.+.++|.
T Consensus 162 ~g~~vgIIG~G~IG~~vA~~l~~~~G~-~V~~~d~~~~~~~~~~~~g~ 208 (348)
T 2w2k_A 162 RGHVLGAVGLGAIQKEIARKAVHGLGM-KLVYYDVAPADAETEKALGA 208 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCC-EEEEECSSCCCHHHHHHHTC
T ss_pred CCCEEEEEEECHHHHHHHHHHHHhcCC-EEEEECCCCcchhhHhhcCc
Confidence 5789999999999999999999 8998 89999988776665555554
|
| >1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A* | Back alignment and structure |
|---|
Probab=94.82 E-value=0.15 Score=42.94 Aligned_cols=44 Identities=30% Similarity=0.372 Sum_probs=35.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh-cCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN-FGVT 241 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~-~ga~ 241 (291)
+|.|+|+|.+|...+..+...| . +|++.++++++.+.+.+ +|..
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~-~v~~~~r~~~~~~~~~~~~g~~ 47 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGY-RIYIANRGAEKRERLEKELGVE 47 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSC-EEEEECSSHHHHHHHHHHTCCE
T ss_pred EEEEECchHHHHHHHHHHHHCCCC-eEEEECCCHHHHHHHHHhcCCE
Confidence 5889999999998887777778 7 89999999888777654 5653
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=94.82 E-value=0.059 Score=48.33 Aligned_cols=46 Identities=22% Similarity=0.351 Sum_probs=39.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCe-EEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASR-VIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~-v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. + |++.+++..+.+.+.++|+
T Consensus 163 ~g~tvgIIG~G~IG~~vA~~l~~~G~-~~V~~~d~~~~~~~~~~~~g~ 209 (364)
T 2j6i_A 163 EGKTIATIGAGRIGYRVLERLVPFNP-KELLYYDYQALPKDAEEKVGA 209 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGCC-SEEEEECSSCCCHHHHHHTTE
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCC-cEEEEECCCccchhHHHhcCc
Confidence 57899999999999999999999999 6 9999988766666666664
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=94.81 E-value=0.088 Score=46.63 Aligned_cols=45 Identities=31% Similarity=0.552 Sum_probs=38.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++.++ +.+.++|+
T Consensus 164 ~g~tvgIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g~ 208 (335)
T 2g76_A 164 NGKTLGILGLGRIGREVATRMQSFGM-KTIGYDPIISP-EVSASFGV 208 (335)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSCH-HHHHHTTC
T ss_pred CcCEEEEEeECHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcCc
Confidence 57899999999999999999999998 89999987765 34556665
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=94.81 E-value=0.12 Score=45.34 Aligned_cols=74 Identities=18% Similarity=0.281 Sum_probs=46.6
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh----hHHHHH-hc------CCCEEeCCCCCCchHHHHHHhhcC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK----KFDRAK-NF------GVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~----~~~~~~-~~------ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
+.+|||+|+ |.+|...+..+...|+ +|+++++++. +++.+. .+ +. ..+..+-.+. +.+.++..
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~---~~~~~~~~ 101 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDNFATGHQRNLDEVRSLVSEKQWSNF-KFIQGDIRNL---DDCNNACA 101 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCHHHHHHHHHHSCHHHHTTE-EEEECCTTSH---HHHHHHHT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCccchhhHHHHhhhcccccCCce-EEEECCCCCH---HHHHHHhc
Confidence 468999998 9999999988888898 8999887653 232221 11 22 2222221112 22333322
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
++|+||.+++.
T Consensus 102 -~~d~vih~A~~ 112 (352)
T 1sb8_A 102 -GVDYVLHQAAL 112 (352)
T ss_dssp -TCSEEEECCSC
T ss_pred -CCCEEEECCcc
Confidence 69999999884
|
| >2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A* | Back alignment and structure |
|---|
Probab=94.78 E-value=0.044 Score=47.26 Aligned_cols=91 Identities=14% Similarity=0.054 Sum_probs=58.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC--------C-EEeCCCCCCchHHHHHHhhcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV--------T-EFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga--------~-~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. + ..+.. .+..+.+... .+
T Consensus 77 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~l~~~-~~ 150 (283)
T 2i7c_A 77 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFI----EDASKFLENV-TN 150 (283)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEE----SCHHHHHHHC-CS
T ss_pred CCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEE----CChHHHHHhC-CC
Confidence 4568999998765 6667777776655699999999999988876421 1 11111 1233334333 44
Q ss_pred CccEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 264 GVDYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
.||+|+--... ...++.+.+.|+++|
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG 186 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNG 186 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEE
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCc
Confidence 79988752211 366788888898883
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=94.77 E-value=0.11 Score=49.55 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.+.+|+|+|+|++|..++..+.+.|..+++.+|.+.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCC
Confidence 457899999999999999999999999999998864
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=94.77 E-value=0.033 Score=46.47 Aligned_cols=70 Identities=27% Similarity=0.345 Sum_probs=44.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+++||+|+ |.+|...+..+...|+ +|+++++++++.+. ....|.. +...+.+.+.++ .+++|+||++.|.
T Consensus 2 k~vlVtGasg~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~------~~~~D~~-~~~~~~~~~~~~-~~~~d~vi~~Ag~ 72 (255)
T 2dkn_A 2 SVIAITGSASGIGAALKELLARAGH-TVIGIDRGQADIEA------DLSTPGG-RETAVAAVLDRC-GGVLDGLVCCAGV 72 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSSSEEC------CTTSHHH-HHHHHHHHHHHH-TTCCSEEEECCCC
T ss_pred cEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEeCChhHccc------cccCCcc-cHHHHHHHHHHc-CCCccEEEECCCC
Confidence 36899988 9999999888888898 89999887664321 1000000 011222233332 2579999999884
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=94.76 E-value=0.18 Score=42.97 Aligned_cols=45 Identities=27% Similarity=0.592 Sum_probs=38.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~ga~ 241 (291)
+|.|+|.|.+|...++.++..|.. +|+++++++++.+.++++|..
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~ 48 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGII 48 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSC
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCCc
Confidence 689999999999999888888852 699999999998888887763
|
| >3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae} | Back alignment and structure |
|---|
Probab=94.75 E-value=0.14 Score=47.06 Aligned_cols=71 Identities=24% Similarity=0.179 Sum_probs=50.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~----~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
++++|+|+|.|..|++++++++..|+ +|++.|..+ ...+.+++.|+......+. .+ ...+.+|+|+
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~-~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~--~~-------~~~~~~d~vv 77 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGA-IVTVNDGKPFDENPTAQSLLEEGIKVVCGSHP--LE-------LLDEDFCYMI 77 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTC-EEEEEESSCGGGCHHHHHHHHTTCEEEESCCC--GG-------GGGSCEEEEE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC-EEEEEeCCcccCChHHHHHHhCCCEEEECCCh--HH-------hhcCCCCEEE
Confidence 57899999999999999999999999 999999854 2345667778754443321 11 1111389888
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
-+.|-
T Consensus 78 ~spgi 82 (451)
T 3lk7_A 78 KNPGI 82 (451)
T ss_dssp ECTTS
T ss_pred ECCcC
Confidence 87774
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=94.74 E-value=0.079 Score=45.31 Aligned_cols=42 Identities=21% Similarity=0.099 Sum_probs=33.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|+|.+|...+..+.. |. +|+++++++++.+.+.+.|.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~-~V~~~~~~~~~~~~~~~~g~ 44 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RF-PTLVWNRTFEKALRHQEEFG 44 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TS-CEEEECSSTHHHHHHHHHHC
T ss_pred eEEEEcccHHHHHHHHHHhC-CC-eEEEEeCCHHHHHHHHHCCC
Confidence 58899999999987776666 98 79999999888777665454
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=94.73 E-value=0.059 Score=47.67 Aligned_cols=46 Identities=22% Similarity=0.408 Sum_probs=38.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++.++.+.+.++|+
T Consensus 144 ~g~tvGIIG~G~IG~~vA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~ 189 (330)
T 4e5n_A 144 DNATVGFLGMGAIGLAMADRLQGWGA-TLQYHEAKALDTQTEQRLGL 189 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHTTTSCC-EEEEECSSCCCHHHHHHHTE
T ss_pred CCCEEEEEeeCHHHHHHHHHHHHCCC-EEEEECCCCCcHhHHHhcCc
Confidence 47899999999999999999999999 89999988755555555554
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=94.66 E-value=0.051 Score=47.50 Aligned_cols=77 Identities=9% Similarity=0.022 Sum_probs=47.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCCCC-CchHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPKDH-DKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~~~-~~~~~~~v~~~~~gg~d~v~d 270 (291)
.+.+|||+|+ |.+|...++.+...|+ +|++++++.+... .+.++..-..+..+-. ...+.+.+.+. ++|+||+
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih 94 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGH-EILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH 94 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTC-EEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence 4568999988 9999999888888898 8999888554321 1112211122222211 12333334332 6999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
++|.
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9874
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=94.62 E-value=0.029 Score=46.93 Aligned_cols=74 Identities=24% Similarity=0.199 Sum_probs=46.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHH-cCCCeEEEEcCChh-hHHHHHhcCCCEEeCCCC-CCchHHHHHHhhcCCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKA-AGASRVIGIDIDPK-KFDRAKNFGVTEFVNPKD-HDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~-~g~~~v~~~~~~~~-~~~~~~~~ga~~~i~~~~-~~~~~~~~v~~~~~gg~d~v~ 269 (291)
+++++||+|+ +++|...++.+.. .|+ +|+.++++++ +.+ .-..+..+- +..++.+.+.....+++|+++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~-~v~~~~~~~~~~~~------~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv 75 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNH-TVINIDIQQSFSAE------NLKFIKADLTKQQDITNVLDIIKNVSFDGIF 75 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTE-EEEEEESSCCCCCT------TEEEEECCTTCHHHHHHHHHHTTTCCEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCc-EEEEeccccccccc------cceEEecCcCCHHHHHHHHHHHHhCCCCEEE
Confidence 4578999988 9999988766655 666 8888877765 211 112222221 223444445333334899999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
++.|.
T Consensus 76 ~nAg~ 80 (244)
T 4e4y_A 76 LNAGI 80 (244)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99884
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=94.60 E-value=0.081 Score=45.52 Aligned_cols=72 Identities=17% Similarity=0.167 Sum_probs=46.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+|||+|+ |.+|...+..+... |. +|++++++..+.++.. +...+ .|..+ ...+.+.+.+. ++|+||.+
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~-~V~~~~r~~~~~~~~~--~~~~~~~D~~d-~~~~~~~~~~~---~~d~vih~ 75 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTE-NVIASDIRKLNTDVVN--SGPFEVVNALD-FNQIEHLVEVH---KITDIYLM 75 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGG-GEEEEESCCCSCHHHH--SSCEEECCTTC-HHHHHHHHHHT---TCCEEEEC
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCC-EEEEEcCCCccccccC--CCceEEecCCC-HHHHHHHHhhc---CCCEEEEC
Confidence 57999988 99999988777776 77 8999888766543322 22222 12222 12333333322 69999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
++.
T Consensus 76 a~~ 78 (312)
T 2yy7_A 76 AAL 78 (312)
T ss_dssp CCC
T ss_pred Ccc
Confidence 885
|
| >3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A | Back alignment and structure |
|---|
Probab=94.59 E-value=0.18 Score=48.01 Aligned_cols=34 Identities=26% Similarity=0.369 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..+++.+.+.|.++++.+|.+
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D 360 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNG 360 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 5789999999999999999999999999999765
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=94.59 E-value=0.042 Score=45.32 Aligned_cols=94 Identities=14% Similarity=0.152 Sum_probs=62.7
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---C-EEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---T-EFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---~-~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.....+.++.+||-+|+|. |..+..+++.. . +|++++.+++.++.+++... . .++..+. .+ .+ ..
T Consensus 62 ~~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~~-~-~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~--~~---~~--~~ 131 (231)
T 1vbf_A 62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEIV-D-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TL---GY--EE 131 (231)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHS-S-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GG---CC--GG
T ss_pred HHHhcCCCCCCEEEEEcCCC-CHHHHHHHHHc-C-EEEEEeCCHHHHHHHHHHHhhcCCeEEEECCc--cc---cc--cc
Confidence 34555678899999999886 88888888764 4 99999999999888875422 1 1222111 00 00 01
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 262 DGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+.||+|+....-......+.+.|+++|
T Consensus 132 ~~~fD~v~~~~~~~~~~~~~~~~L~pgG 159 (231)
T 1vbf_A 132 EKPYDRVVVWATAPTLLCKPYEQLKEGG 159 (231)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEEE
T ss_pred CCCccEEEECCcHHHHHHHHHHHcCCCc
Confidence 2479999877554444567788888883
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=94.58 E-value=0.12 Score=45.49 Aligned_cols=45 Identities=16% Similarity=0.357 Sum_probs=37.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-ChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI-DPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.++ +.++ +.+.++|+
T Consensus 145 ~g~~vgIIG~G~IG~~~A~~l~~~G~-~V~~~d~~~~~~-~~~~~~g~ 190 (320)
T 1gdh_A 145 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRASS-SDEASYQA 190 (320)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCCCH-HHHHHHTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcCh-hhhhhcCc
Confidence 57799999999999999999999998 9999998 7665 34455565
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=94.58 E-value=0.19 Score=44.97 Aligned_cols=37 Identities=30% Similarity=0.163 Sum_probs=29.0
Q ss_pred CCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 192 VEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.+.+.+|||+|+ |-+|...+..+...|+ +|+++++..
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~-~V~~~~r~~ 45 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDNLV 45 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCH
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCC-eEEEEEecC
Confidence 456789999988 9999999888888898 899997754
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=94.57 E-value=0.1 Score=45.48 Aligned_cols=91 Identities=14% Similarity=0.094 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------CEEeCCCCCCchHHHHHHhhcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---------~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.++++||++|+|. |..+..+++..+..+|++++.+++-.+.+++.-. ...+.. .+..+.+.. ..+
T Consensus 94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~----~Da~~~l~~-~~~ 167 (304)
T 2o07_A 94 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV----GDGFEFMKQ-NQD 167 (304)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHT-CSS
T ss_pred CCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEE----CcHHHHHhh-CCC
Confidence 4568999998765 6677778876655699999999998888875311 111111 122233333 234
Q ss_pred CccEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 264 GVDYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
.||+||--... ...++.+.+.|+++|
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG 203 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDG 203 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEE
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCe
Confidence 79988843222 345888889999883
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=94.55 E-value=0.084 Score=46.35 Aligned_cols=88 Identities=10% Similarity=0.037 Sum_probs=59.1
Q ss_pred CEEEEEcCChHHHHHHHHHHHc-CCCeEEEEcCChhhHHHHHhc-CCC----EEeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAA-GASRVIGIDIDPKKFDRAKNF-GVT----EFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~-g~~~v~~~~~~~~~~~~~~~~-ga~----~~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
.+||++|+|. |..+..+++.. +. +|++++.+++-.++++++ +.. ..+.. .+..+.+.+...+.||+||
T Consensus 91 ~rVLdIG~G~-G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~----~Da~~~l~~~~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGA-CTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRAPRVKIRV----DDARMVAESFTPASRDVII 164 (317)
T ss_dssp CEEEEESCGG-GHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCTTTEEEEE----SCHHHHHHTCCTTCEEEEE
T ss_pred CEEEEEECCc-CHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCCCceEEEE----CcHHHHHhhccCCCCCEEE
Confidence 3899998865 77778888865 56 899999999999999864 321 11111 2334445544445899887
Q ss_pred EcCC----------ChHHHHHHHHHhhccC
Q 022865 270 ECIG----------NVSVMRAALECCHKVS 289 (291)
Q Consensus 270 d~~g----------~~~~~~~~~~~l~~~g 289 (291)
--.. ....++.+.+.|+++|
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgG 194 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGG 194 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCc
Confidence 5321 1456888889999883
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=94.53 E-value=0.14 Score=45.62 Aligned_cols=45 Identities=29% Similarity=0.449 Sum_probs=37.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++. +.+.+.+.|+
T Consensus 159 ~g~tvGIIGlG~IG~~vA~~l~~~G~-~V~~~d~~~-~~~~~~~~g~ 203 (352)
T 3gg9_A 159 KGQTLGIFGYGKIGQLVAGYGRAFGM-NVLVWGREN-SKERARADGF 203 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSHH-HHHHHHHTTC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEECCCC-CHHHHHhcCc
Confidence 47799999999999999999999999 999998875 3455556665
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=94.52 E-value=0.08 Score=47.95 Aligned_cols=46 Identities=17% Similarity=0.133 Sum_probs=39.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|++|.|+|.|.+|...++.++.+|. +|++.+++.++.+.++++|+
T Consensus 190 ~gktvGIIGlG~IG~~vA~~l~a~G~-~V~~~d~~~~~~~~~~~~G~ 235 (393)
T 2nac_A 190 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLPESVEKELNL 235 (393)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCCHHHHHHHTC
T ss_pred CCCEEEEEeECHHHHHHHHHHHhCCC-EEEEEcCCccchhhHhhcCc
Confidence 57899999999999999999999998 89999988766666666665
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=94.51 E-value=0.27 Score=42.81 Aligned_cols=45 Identities=29% Similarity=0.419 Sum_probs=37.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~--~~~~~~~~~~ga 240 (291)
.+|.|+|.|.+|...++.+...|..+|++.+++ +++.+.+.+.|+
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~g~ 71 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEELGV 71 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHTTC
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHCCC
Confidence 479999999999988888888887689999996 577777777665
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=94.50 E-value=0.31 Score=40.77 Aligned_cols=37 Identities=38% Similarity=0.451 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+.+|.|+|+|.+|...+..+...|. +|++.++++++
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~-~V~~~~r~~~~ 54 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGH-EVTIGTRDPKA 54 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-EEEEEeCChhh
Confidence 35789999999999999888888898 89999999886
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=94.48 E-value=0.18 Score=43.52 Aligned_cols=85 Identities=16% Similarity=0.154 Sum_probs=54.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC-----CCCCchHHHHHHhhcC--CCccEEE
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP-----KDHDKPIQQVLVDLTD--GGVDYSF 269 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~-----~~~~~~~~~~v~~~~~--gg~d~v~ 269 (291)
+|.|+|+|.+|...+..+...|. +|+.+++++++.+.+++.|....... .-...+. .+... ..+|+||
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~-~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGN-DVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSP----EEIDHQNEQVDLII 79 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECG----GGCCTTSCCCSEEE
T ss_pred eEEEECcCHHHHHHHHHHHhCCC-cEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecc----hhhcccCCCCCEEE
Confidence 69999999999998888878898 89999999998887776664221100 0000000 11111 1589999
Q ss_pred EcCCChHHHHHHHHHhhc
Q 022865 270 ECIGNVSVMRAALECCHK 287 (291)
Q Consensus 270 d~~g~~~~~~~~~~~l~~ 287 (291)
-|+.... ....++.+++
T Consensus 80 ~~v~~~~-~~~v~~~l~~ 96 (316)
T 2ew2_A 80 ALTKAQQ-LDAMFKAIQP 96 (316)
T ss_dssp ECSCHHH-HHHHHHHHGG
T ss_pred EEecccc-HHHHHHHHHH
Confidence 9988654 5555555543
|
| >1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.064 Score=46.01 Aligned_cols=89 Identities=16% Similarity=0.105 Sum_probs=59.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC------C--C--EEeCCCCCCchHHHHHHhhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG------V--T--EFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g------a--~--~~i~~~~~~~~~~~~v~~~~~g 263 (291)
++.+||++|+|. |..+..+++..+..+|++++.+++-.+.+++.- . + .++.. +..+.+.. ..+
T Consensus 75 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~-----D~~~~l~~-~~~ 147 (275)
T 1iy9_A 75 NPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVD-----DGFMHIAK-SEN 147 (275)
T ss_dssp SCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEES-----CSHHHHHT-CCS
T ss_pred CCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEEC-----cHHHHHhh-CCC
Confidence 468999998765 667777777767669999999999888887531 1 1 11111 22233433 234
Q ss_pred CccEEEEcCCC----------hHHHHHHHHHhhccC
Q 022865 264 GVDYSFECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
.||+|+--... ...++.+.+.|+++|
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG 183 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDG 183 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCc
Confidence 79988764332 467889999999984
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=94.46 E-value=0.13 Score=43.46 Aligned_cols=86 Identities=24% Similarity=0.399 Sum_probs=57.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC-EEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~-~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
++++++||-+|+|. |..++.+++ +|. +|+++|.++...+.+++ .+.+ .++. .++.+. +..+.||
T Consensus 118 ~~~~~~VLDiGcG~-G~l~~~la~-~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~-----~d~~~~---~~~~~fD 186 (254)
T 2nxc_A 118 LRPGDKVLDLGTGS-GVLAIAAEK-LGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE-----GSLEAA---LPFGPFD 186 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE-----SCHHHH---GGGCCEE
T ss_pred cCCCCEEEEecCCC-cHHHHHHHH-hCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEE-----CChhhc---CcCCCCC
Confidence 57889999999876 777777666 677 99999999998877765 3432 1111 122221 2234799
Q ss_pred EEEEcCCC---hHHHHHHHHHhhcc
Q 022865 267 YSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
+|+..... ...+..+.+.|+++
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~Lkpg 211 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPG 211 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCC
Confidence 99975432 34566777778887
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=94.45 E-value=0.1 Score=46.08 Aligned_cols=35 Identities=26% Similarity=0.299 Sum_probs=27.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+|||+|+ |.+|...++.+...|+ +|++++++.++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 37 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRASS 37 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC----
T ss_pred CEEEEECCCChHHHHHHHHHHHCCC-EEEEEECCCcc
Confidence 57999987 9999999988888898 89999887653
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=94.45 E-value=0.11 Score=45.84 Aligned_cols=46 Identities=26% Similarity=0.354 Sum_probs=37.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.+.+|.|+|.|.+|...++.++..|. +|++.+++.++.+.+.++|.
T Consensus 154 ~g~~vgIIG~G~iG~~iA~~l~~~G~-~V~~~d~~~~~~~~~~~~g~ 199 (330)
T 2gcg_A 154 TQSTVGIIGLGRIGQAIARRLKPFGV-QRFLYTGRQPRPEEAAEFQA 199 (330)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-CEEEEESSSCCHHHHHTTTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCC-EEEEECCCCcchhHHHhcCc
Confidence 46789999999999999999999999 89999887765555555543
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.16 Score=44.50 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=56.8
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA-GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~-g~~~v~-~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|.|+|.|.+|...+..++.. ++ +++ +.++++++.+. ++++|.. +. ++.+.+.+ ..+|+|+.|+.
T Consensus 5 ~vgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~~~~~~~~----~~----~~~~~l~~---~~~D~V~i~tp 72 (331)
T 4hkt_A 5 RFGLLGAGRIGKVHAKAVSGNADA-RLVAVADAFPAAAEAIAGAYGCE----VR----TIDAIEAA---ADIDAVVICTP 72 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCE----EC----CHHHHHHC---TTCCEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHhhCCCc-EEEEEECCCHHHHHHHHHHhCCC----cC----CHHHHhcC---CCCCEEEEeCC
Confidence 688999999998877766665 66 565 57788777554 4567764 22 23333332 36999999999
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
+......+.+++..+
T Consensus 73 ~~~h~~~~~~al~~g 87 (331)
T 4hkt_A 73 TDTHADLIERFARAG 87 (331)
T ss_dssp GGGHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHcC
Confidence 988888888887654
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=94.42 E-value=0.1 Score=46.13 Aligned_cols=44 Identities=23% Similarity=0.348 Sum_probs=37.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
.+.+|.|+|.|.+|...++.++..|. +|++.+++.++ +.+.++|
T Consensus 145 ~g~~vgIIG~G~iG~~vA~~l~~~G~-~V~~~d~~~~~-~~~~~~g 188 (333)
T 2d0i_A 145 YGKKVGILGMGAIGKAIARRLIPFGV-KLYYWSRHRKV-NVEKELK 188 (333)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCH-HHHHHHT
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCC-EEEEECCCcch-hhhhhcC
Confidence 46799999999999999999999998 89999988776 4444444
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=94.42 E-value=0.19 Score=46.11 Aligned_cols=40 Identities=38% Similarity=0.633 Sum_probs=34.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+|.|+|+|.+|+..+..+...|. +|+++++++++.+.+.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~-~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHhC
Confidence 58899999999988877778898 89999999999887765
|
| >4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A | Back alignment and structure |
|---|
Probab=94.41 E-value=0.22 Score=45.39 Aligned_cols=40 Identities=30% Similarity=0.487 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+.++++|+|+|+|.+|...++.|+.+|+ +|++++.++..
T Consensus 31 ~~~~~~~IlIlG~G~lg~~~~~aa~~lG~-~v~v~d~~~~~ 70 (419)
T 4e4t_A 31 PILPGAWLGMVGGGQLGRMFCFAAQSMGY-RVAVLDPDPAS 70 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCTTC
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEECCCCcC
Confidence 45689999999999999999999999999 88888876553
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=94.35 E-value=0.059 Score=48.01 Aligned_cols=35 Identities=23% Similarity=0.260 Sum_probs=30.0
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
++|||+|+ |.+|...+..+...|+ +|++++++.++
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~-~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCC-EEEEEecCCcc
Confidence 58999998 9999999988888898 89998887653
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=94.35 E-value=0.16 Score=47.19 Aligned_cols=44 Identities=30% Similarity=0.449 Sum_probs=37.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
.-+|.|+|+|.+|+..+..+...|. +|++++.++++.+.+++-+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~-~V~~~d~~~~~v~~l~~~~ 51 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGH-DVFCLDVDQAKIDILNNGG 51 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHTTC
T ss_pred CceEEEECcCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHCCC
Confidence 3589999999999988877778898 8999999999998887643
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.1 Score=47.03 Aligned_cols=82 Identities=21% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCCCCEEEEEcC-ChHHHH-HHHHHHHcCCCeEEEEcCChhh----------------HHHHHhcCCCE-EeCCCCCC-c
Q 022865 192 VEPGSIVAVFGL-GTVGLA-VAEGAKAAGASRVIGIDIDPKK----------------FDRAKNFGVTE-FVNPKDHD-K 251 (291)
Q Consensus 192 ~~~g~~vlI~G~-g~vG~~-ai~~a~~~g~~~v~~~~~~~~~----------------~~~~~~~ga~~-~i~~~~~~-~ 251 (291)
...++++||+|+ +++|++ ++.+|...|+ .++++....+. .+.+++.|... .++.+-.+ +
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA-~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGA-ATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE 125 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCC-EEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCC-CEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence 345789999988 999987 4566656788 67776554321 23455666544 33333222 2
Q ss_pred hHHHHHHhhc--CCCccEEEEcCCC
Q 022865 252 PIQQVLVDLT--DGGVDYSFECIGN 274 (291)
Q Consensus 252 ~~~~~v~~~~--~gg~d~v~d~~g~ 274 (291)
...+.+.+.. .|++|+++.+++.
T Consensus 126 ~i~~vi~~i~~~~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 126 IKAQVIEEAKKKGIKFDLIVYSLAS 150 (401)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEeccc
Confidence 3333333322 3589999999885
|
| >3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=94.32 E-value=0.041 Score=45.19 Aligned_cols=31 Identities=35% Similarity=0.521 Sum_probs=28.5
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|+.|+.++..+...|+ +|++++..+
T Consensus 5 V~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~~ 35 (336)
T 3kkj_A 5 IAIIGTGIAGLSAAQALTAAGH-QVHLFDKSR 35 (336)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEECCC
Confidence 8999999999999999999999 899998764
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=94.31 E-value=0.25 Score=43.48 Aligned_cols=83 Identities=20% Similarity=0.227 Sum_probs=52.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC--------CCCCchHHHHHHhhcCCCccE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP--------KDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~--------~~~~~~~~~~v~~~~~gg~d~ 267 (291)
.+|.|+|+|.+|...+..+...|. +|+.+++++++.+.+++.+.-.+... +....+..+.+ ..+|+
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~D~ 78 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDADV 78 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCSE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHHHHH-----hcCCE
Confidence 479999999999988887778898 89999999988877765421111110 00001221212 25888
Q ss_pred EEEcCCChHHHHHHHHHh
Q 022865 268 SFECIGNVSVMRAALECC 285 (291)
Q Consensus 268 v~d~~g~~~~~~~~~~~l 285 (291)
||.|+..... ..+++.+
T Consensus 79 vi~~v~~~~~-~~~~~~l 95 (359)
T 1bg6_A 79 ILIVVPAIHH-ASIAANI 95 (359)
T ss_dssp EEECSCGGGH-HHHHHHH
T ss_pred EEEeCCchHH-HHHHHHH
Confidence 8888887653 4444444
|
| >1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A* | Back alignment and structure |
|---|
Probab=94.29 E-value=0.13 Score=44.59 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=57.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC--------CC-EEeCCCCCCchHHHHHHhhcCCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG--------VT-EFVNPKDHDKPIQQVLVDLTDGG 264 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g--------a~-~~i~~~~~~~~~~~~v~~~~~gg 264 (291)
++.+||++|+|. |..+..+++..+..+|++++.+++..+.+++.- .+ ..+.. .+..+.+.. ..+.
T Consensus 90 ~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~----~D~~~~l~~-~~~~ 163 (296)
T 1inl_A 90 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVI----ANGAEYVRK-FKNE 163 (296)
T ss_dssp SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHGGG-CSSC
T ss_pred CCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEE----CcHHHHHhh-CCCC
Confidence 457999998765 667777787766669999999999888887532 11 11111 122222322 2347
Q ss_pred ccEEEEcCCC-----------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN-----------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~-----------~~~~~~~~~~l~~~g 289 (291)
||+|+--... ...++.+.+.|+++|
T Consensus 164 fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG 199 (296)
T 1inl_A 164 FDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDG 199 (296)
T ss_dssp EEEEEEEC----------CCSHHHHHHHHHHEEEEE
T ss_pred ceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCc
Confidence 9988742211 456788888898883
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=94.29 E-value=0.31 Score=42.84 Aligned_cols=81 Identities=19% Similarity=0.164 Sum_probs=56.1
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEE-EEcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA-GASRVI-GIDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~-g~~~v~-~~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|.|+|.|.+|...+..++.. ++ +++ +.++++++.+. ++++|+ ..+. ++.+.+. ...+|+|+.|+.
T Consensus 6 rvgiiG~G~~g~~~~~~l~~~~~~-~l~av~d~~~~~~~~~a~~~g~-~~~~------~~~~~l~---~~~~D~V~i~tp 74 (344)
T 3euw_A 6 RIALFGAGRIGHVHAANIAANPDL-ELVVIADPFIEGAQRLAEANGA-EAVA------SPDEVFA---RDDIDGIVIGSP 74 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHTTTC-EEES------SHHHHTT---CSCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHhCCCc-EEEEEECCCHHHHHHHHHHcCC-ceeC------CHHHHhc---CCCCCEEEEeCC
Confidence 789999999998877776666 56 555 57787777554 456774 2221 2222222 136999999999
Q ss_pred ChHHHHHHHHHhhcc
Q 022865 274 NVSVMRAALECCHKV 288 (291)
Q Consensus 274 ~~~~~~~~~~~l~~~ 288 (291)
+......+..++..+
T Consensus 75 ~~~h~~~~~~al~~g 89 (344)
T 3euw_A 75 TSTHVDLITRAVERG 89 (344)
T ss_dssp GGGHHHHHHHHHHTT
T ss_pred chhhHHHHHHHHHcC
Confidence 988888888887654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 291 | ||||
| d1cdoa1 | 199 | b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase | 6e-51 | |
| d2fzwa1 | 197 | b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase | 1e-48 | |
| d1p0fa1 | 198 | b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro | 7e-45 | |
| d1e3ia1 | 202 | b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase | 9e-45 | |
| d2jhfa1 | 198 | b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase | 2e-43 | |
| d1f8fa1 | 194 | b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr | 2e-32 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 6e-32 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 2e-30 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 1e-29 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 2e-28 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 1e-27 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 1e-23 | |
| d1uufa1 | 179 | b.35.1.2 (A:3-144,A:313-349) Hypothetical protein | 2e-23 | |
| d1vj0a1 | 184 | b.35.1.2 (A:2-155,A:338-367) Hypothetical protein | 8e-23 | |
| d1llua1 | 175 | b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase | 2e-22 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 5e-22 | |
| d1piwa1 | 192 | b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy | 1e-21 | |
| d1jvba1 | 177 | b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase | 2e-17 | |
| d1e3ja1 | 178 | b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor | 3e-17 | |
| d1kola1 | 201 | b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog | 9e-17 | |
| d1rjwa1 | 171 | b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase | 4e-15 | |
| d1pl8a1 | 185 | b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor | 1e-13 | |
| d1h2ba1 | 171 | b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas | 2e-13 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 1e-12 | |
| d1jqba1 | 177 | b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon | 2e-11 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 4e-09 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 2e-08 | |
| d1pl8a2 | 171 | c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh | 4e-08 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 4e-08 | |
| d1yb5a1 | 150 | b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductas | 4e-07 | |
| d1iz0a1 | 131 | b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase | 1e-06 | |
| d1xa0a1 | 152 | b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo | 2e-05 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 5e-05 | |
| d1e3ja2 | 170 | c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh | 6e-05 | |
| d1mv8a2 | 202 | c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pse | 3e-04 | |
| d1uufa2 | 168 | c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc | 3e-04 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 7e-04 | |
| d1dlja2 | 196 | c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGD | 7e-04 | |
| d1qora1 | 147 | b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductas | 7e-04 |
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 164 bits (415), Expect = 6e-51
Identities = 95/200 (47%), Positives = 129/200 (64%), Gaps = 1/200 (0%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+T G+VI CKAAVAWE NKPLVIE+++V P A E+RIKI+ T +CHTD Y +
Sbjct: 1 ATVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
FP +LGHE AGIVESVG GVTE QPG+ VIP + ++C EC+FC+S KTN C K A
Sbjct: 61 GFPVVLGHEGAGIVESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGW-ANE 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
+ +M+ +++RF+ G+ + F+GTSTFSQYTVV+ ++VAKIDP LD+ + +
Sbjct: 120 SPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLES 179
Query: 182 GLGAVWNTAKVEPGSIVAVF 201
A+ + V
Sbjct: 180 VNDAIDLMKHGKCIRTVLSL 199
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 158 bits (400), Expect = 1e-48
Identities = 111/196 (56%), Positives = 132/196 (67%), Gaps = 1/196 (0%)
Query: 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP 64
+VI CKAAVAWE KPL IE+++VAPP+A EVRIKI+ TA+CHTDAYT SG DPEG FP
Sbjct: 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFP 61
Query: 65 CILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGV 124
ILGH AGIVESVGEGVT+++ GD VIP Y +C ECKFC + KTNLC K+R G G
Sbjct: 62 VILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKG- 120
Query: 125 MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLG 184
+M D SRF+ GK I H+MGTSTFS+YTVV D+SVAKIDP +D+
Sbjct: 121 LMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINK 180
Query: 185 AVWNTAKVEPGSIVAV 200
A + V
Sbjct: 181 AFELMHSGKSIRTVVK 196
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 148 bits (375), Expect = 7e-45
Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 12/208 (5%)
Query: 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
T G+ ITCKAAVAWEP+KPL +E + VAPP+A EVRIKIL + +C +D+ P
Sbjct: 2 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK- 60
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
FP ILGHEA G+VES+G GVT V+PGD VIP + +C C+ CKS +N C K
Sbjct: 61 FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAK- 119
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTG 182
+M D SRF+ GKPIY+ MGTSTF++YTVV D++VAKIDP+ ++ + +
Sbjct: 120 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTL--- 176
Query: 183 LGAVWNTAKVEPGSIVAVFGLGTVGLAV 210
++ + G G + +
Sbjct: 177 -------DQINKAFELLSSGQGVRSIMI 197
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 148 bits (374), Expect = 9e-45
Identities = 89/201 (44%), Positives = 126/201 (62%), Gaps = 7/201 (3%)
Query: 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL 62
T+G+VI CKAA+AW+ PL IE+++V+PP+A EVRI+++ T +C TD + L
Sbjct: 2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATD-PKKKAL 60
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
FP +LGHE AGIVESVG GVT +PGD VIP + +C+ CK C S TNLCGK+R
Sbjct: 61 FPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYP 120
Query: 123 GV---MMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGV 179
+ +M DR SRF+ G+ IYHFMG S+FSQYTVV + ++A++D + LD +
Sbjct: 121 TIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPF 180
Query: 180 PTGLGAVWNTAKVEPGSIVAV 200
+ A+ ++ G +
Sbjct: 181 ESINDAI---DLMKEGKSIRT 198
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 144 bits (365), Expect = 2e-43
Identities = 97/201 (48%), Positives = 121/201 (60%), Gaps = 5/201 (2%)
Query: 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
ST G+VI CKAAV WE KP IE+V+VAPP+A EVRIK++ T +C +D + SG
Sbjct: 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVTP 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG 121
P I GHEAAGIVES+GEGVT V+PGD VIP + +C +C+ CK + N C K +
Sbjct: 61 -LPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMP 119
Query: 122 AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPT 181
G M D SRF+ GKPI+HF+GTSTFSQYTVV ++SVAKID LD L V
Sbjct: 120 RGTMQ-DGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALD---PLITHVLP 175
Query: 182 GLGAVWNTAKVEPGSIVAVFG 202
+ G +
Sbjct: 176 FEKINEGFDLLRSGESIRTIL 196
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 116 bits (291), Expect = 2e-32
Identities = 50/194 (25%), Positives = 85/194 (43%), Gaps = 5/194 (2%)
Query: 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
AAV ++ +++ PQ EV +K++ T +CHTD K P P +LG
Sbjct: 3 DIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPVP-LPAVLG 61
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
HE +GI+E++G VTE+Q GDHV+ Y C +C C +G C + G +G
Sbjct: 62 HEGSGIIEAIGPNVTELQVGDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEG 120
Query: 129 RKSRFSINGK--PIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+ + HF S+F+ Y + + + K+ P D++ A+
Sbjct: 121 N-HALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAFDEINQAAI 179
Query: 187 WNTAKVEPGSIVAV 200
+ + I+ +
Sbjct: 180 DSRKGITLKPIIKI 193
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 114 bits (286), Expect = 6e-32
Identities = 65/121 (53%), Positives = 83/121 (68%)
Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
AP +KVCL+GCG TG GA T KV+PGS VFGLG VGL+V G K+AGASR+IGID
Sbjct: 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGID 61
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
++ KF++A G TE ++PKD KPI +VL ++T V Y+FE IG++ M AL CH
Sbjct: 62 LNKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCH 121
Query: 287 K 287
Sbjct: 122 M 122
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 110 bits (275), Expect = 2e-30
Identities = 67/124 (54%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
APL+ CL+GCG TG GA NTAKV PGS AVFGLG VG + G KAAGASR+IG+
Sbjct: 1 APLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVG 59
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
KF +A G TE +NPKD+DKPI +V+ + T+GGVDY+ EC G + M AL+ +
Sbjct: 60 THKDKFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTY 119
Query: 287 KVSG 290
SG
Sbjct: 120 CGSG 123
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 108 bits (270), Expect = 1e-29
Identities = 65/121 (53%), Positives = 86/121 (71%)
Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
A L++VCL+GCG +G GA NTAKV PGS AVFGLG VGL+ G K AGASR+I ID
Sbjct: 1 ANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAID 60
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
I+ +KF +AK G T+ +NP++ DKP+Q V+ +LT GGVDYS +C G ++AA++C
Sbjct: 61 INGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTV 120
Query: 287 K 287
Sbjct: 121 L 121
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 105 bits (263), Expect = 2e-28
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
+PL+KVCL+GCG TG G+ AKV GS AVFGLG VGL+V G KAAGA+R+IG+D
Sbjct: 1 SPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVD 60
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
I+ KF +AK G TE VNP+D+ KPIQ+VL ++++GGVD+SFE IG + M AL CC
Sbjct: 61 INKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQ 120
Query: 287 KVSG 290
+ G
Sbjct: 121 EAYG 124
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 103 bits (256), Expect = 1e-27
Identities = 89/121 (73%), Positives = 101/121 (83%)
Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
APLDKVCLLGCG+ TG GA NTAK+EPGS+ AVFGLG VGLAV G K AGASR+IG+D
Sbjct: 1 APLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVD 60
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
I+ KF RAK FG TE +NP+D KPIQ+VL+++TDGGVDYSFECIGNV VMRAALE CH
Sbjct: 61 INKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACH 120
Query: 287 K 287
K
Sbjct: 121 K 121
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 92.8 bits (229), Expect = 1e-23
Identities = 80/121 (66%), Positives = 93/121 (76%)
Query: 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226
APLD VCLLGCGV TG GA NTAKVEPGS AVFGLG VGLA G +AGA R+I +D
Sbjct: 1 APLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVD 60
Query: 227 IDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
++P KF++AK FG T+FVNP DH +PI QVL +T+GGVD+S EC+GNV VMR ALE C
Sbjct: 61 LNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCL 120
Query: 287 K 287
K
Sbjct: 121 K 121
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 92.3 bits (228), Expect = 2e-23
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 16/177 (9%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
KA A+ +PL D+ P +V+I+I + +CH+D + + ++PC+ GHE
Sbjct: 2 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHE 61
Query: 71 AAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDR 129
G V +VG+ V + PGD V + C C+ C+ C+ G N C + G T
Sbjct: 62 IVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTG-TYNSPT---- 116
Query: 130 KSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ-APLDKVCLLGCGVPTGLGA 185
P +SQ VVH+ V +I + + + L
Sbjct: 117 ---------PDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRG 164
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 90.7 bits (224), Expect = 8e-23
Identities = 42/200 (21%), Positives = 74/200 (37%), Gaps = 26/200 (13%)
Query: 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL 67
+ A V + N+PLV ++ +++ G + ++IL +C +D + + G+DP P IL
Sbjct: 3 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIIL 62
Query: 68 GHEAAGIVESVGEGVTEVQPGD-----HVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
GHE AG V V ++ ++ C EC +CK K R G
Sbjct: 63 GHEGAGRVVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYG- 121
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVSVAKIDPQAPLDKVCLLGCGVPT 181
+N S + H G +S + V+ + V K+ + L
Sbjct: 122 ---INRGCSEYP-------HLRG--CYSSHIVLDPETDVLKVSEKITHRLP--LKEAN-- 165
Query: 182 GLGAVWNTAKVEPGSIVAVF 201
+ V ++
Sbjct: 166 ---KALELMESREALKVILY 182
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 89.6 bits (221), Expect = 2e-22
Identities = 53/196 (27%), Positives = 78/196 (39%), Gaps = 30/196 (15%)
Query: 9 TCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCIL 67
T KAAV PL IE+V+V P G+V +KI + +CHTD + G P + P I
Sbjct: 5 TMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIP 64
Query: 68 GHEAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
GHE G V +VG GVT V+ GD V IP C C+ C +G LC
Sbjct: 65 GHEGVGYVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLC------------- 111
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
+ + +++Y + V + P + + G + +
Sbjct: 112 ---------ESQQNTGYSVNGGYAEYVLADPNYVGIL----PKNVKATIHPGKLDDINQI 158
Query: 187 WNTAK--VEPGSIVAV 200
+ + G IV
Sbjct: 159 LDQMRAGQIEGRIVLE 174
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 88.4 bits (218), Expect = 5e-22
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227
P++ + LGCG+ TG GA N KV P S +G G VGL+ AK GAS +I +DI
Sbjct: 2 PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61
Query: 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
+ + AK G T +N K D + ++TDGGV+++ E G+ +++ ++
Sbjct: 62 VESRLELAKQLGATHVINSKTQD--PVAAIKEITDGGVNFALESTGSPEILKQGVDALG 118
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 87.6 bits (216), Expect = 1e-21
Identities = 30/196 (15%), Positives = 60/196 (30%), Gaps = 20/196 (10%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPP--QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILG 68
+ + + P ++ IKI +C +D + +G P ++G
Sbjct: 8 EGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVG 67
Query: 69 HEAAGIVESVGEGVTE-VQPGDH-VIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
HE G V +G ++ G + C EC CK+ C
Sbjct: 68 HEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYC------------- 114
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
K + + ++ ++ Y VH+ V I ++ + + GV +
Sbjct: 115 --TKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPVGEAGVHEAFERM 172
Query: 187 WNTAKVEPGSIVAVFG 202
V + +
Sbjct: 173 -EKGDVRYRFTLVGYD 187
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Score = 76.1 bits (186), Expect = 2e-17
Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 31/185 (16%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL-------- 62
+A E KPL ++++ V P+ +V IK+ +CH+D + G+
Sbjct: 2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVK 61
Query: 63 FPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGA 122
P LGHE AG +E VG+ V GD V C +C+ G+ +LC R
Sbjct: 62 LPVTLGHEIAGKIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPR----- 116
Query: 123 GVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVS-VAKIDPQAPLDKVCLLGCGVPT 181
+++Y +V + K+ P+ +
Sbjct: 117 -----------------WLGINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMKLEEANE 159
Query: 182 GLGAV 186
+ +
Sbjct: 160 AIDNL 164
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 75.8 bits (185), Expect = 3e-17
Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 26/194 (13%)
Query: 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSG---KDPEGLFPCILG 68
+AV ++ N L +E + P+ EV +++ + +C +D + + D P ++G
Sbjct: 4 SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIG 62
Query: 69 HEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
HEA+G V VG+ V ++ GD V CR C+FCK GK NLC
Sbjct: 63 HEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLC--------------- 107
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
+ ++Y V K+ + ++ + + A
Sbjct: 108 ------PDLTFCATPPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTVDAF-E 160
Query: 189 TAKVEPGSIVAVFG 202
A+ + + + V
Sbjct: 161 AARKKADNTIKVMI 174
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 74.9 bits (183), Expect = 9e-17
Identities = 41/218 (18%), Positives = 73/218 (33%), Gaps = 28/218 (12%)
Query: 11 KAAVAWEPNKPLVIEDVQV-------APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLF 63
+ V K + ++ + V +K++ T +C +D + G
Sbjct: 3 RGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRG-RTTAQV 60
Query: 64 PCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAG 123
+LGHE G V G V +Q GD V + C C+ CK T +C V A G
Sbjct: 61 GLVLGHEITGEVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGG 120
Query: 124 VMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPT 181
++ ++Y +V D ++ K+ + + + V
Sbjct: 121 AYGYVDMGDWTG------------GQAEYVLVPYADFNLLKLPDRDKAMEKINIAEVVGV 168
Query: 182 GLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 219
+ ++ + A G F G V + K A
Sbjct: 169 QVISLDD-APRGYG----EFDAGVPKKFVIDPHKTFSA 201
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 69.6 bits (169), Expect = 4e-15
Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 32/196 (16%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCIL-GH 69
KAAV + +PL I++V+ GEV ++I +CHTD + G P ++ GH
Sbjct: 2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGH 61
Query: 70 EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMND 128
E GIVE VG GVT ++ GD V IP + C C +C SG+ LC
Sbjct: 62 EGVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLC--------------- 106
Query: 129 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCL--LGCGVPTGLGAV 186
+ + +++Y V KI ++ L + L
Sbjct: 107 -------EHQKNAGYSVDGGYAEYCRAAADYVVKIPDNTIIEVQPLEKINEVFDRMLKGQ 159
Query: 187 WNTAKVEPGSIVAVFG 202
G +V
Sbjct: 160 I------NGRVVLTLE 169
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.7 bits (159), Expect = 1e-13
Identities = 38/193 (19%), Positives = 62/193 (32%), Gaps = 28/193 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGL---FPCIL 67
+ V P L +E+ + P EV +++ +C +D + W P +L
Sbjct: 9 LSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVL 67
Query: 68 GHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMN 127
GHEA+G VE VG V ++PGD V A +FCK G+ NL + N
Sbjct: 68 GHEASGTVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGN 127
Query: 128 DRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVW 187
++ + K+ +
Sbjct: 128 ---------------------LCRFYKHNAAFCYKLPDNVKPLVTHRFPLEKAL---EAF 163
Query: 188 NTAKVEPGSIVAV 200
T K G + +
Sbjct: 164 ETFKKGLGLKIML 176
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 65.1 bits (157), Expect = 2e-13
Identities = 47/194 (24%), Positives = 68/194 (35%), Gaps = 28/194 (14%)
Query: 11 KAAVAWEPNKPLVIEDVQV-APPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFP---CI 66
KAA E NKPL IEDV +V ++I +CHTD + G E L P
Sbjct: 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYT 60
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMM 126
LGHE G +E V EGV ++ GD VI C C++G+ C +
Sbjct: 61 LGHENVGYIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLE--------- 111
Query: 127 NDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAV 186
F+++ SV K+ ++ + L +
Sbjct: 112 -------------FPGLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEINDVLERL 158
Query: 187 WNTAKVEPGSIVAV 200
G V +
Sbjct: 159 EKGEV--LGRAVLI 170
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 62.6 bits (151), Expect = 1e-12
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227
PL+ ++ + TG A +E GS V V G+G VGL GAK GA R+IG+
Sbjct: 2 PLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60
Query: 228 DPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
P + AK +G T+ +N + QV+ GVD G + A++
Sbjct: 61 RPICVEAAKFYGATDILNY-KNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKP 119
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 59.6 bits (143), Expect = 2e-11
Identities = 35/203 (17%), Positives = 60/203 (29%), Gaps = 33/203 (16%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHE 70
K NK L + + + + ++ L + C +D +T ILGHE
Sbjct: 2 KGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHE 60
Query: 71 AAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRK 130
A G V VG V + +PGD VI ++G
Sbjct: 61 AVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNG--------------- 105
Query: 131 SRFSINGKPIYHFMGTSTFSQYTVVH--DVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN 188
+ + F +Y V+ D+++A + L K+ G +
Sbjct: 106 ----MLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVY---HGFDHIEE 158
Query: 189 TAKVEPGSIVAVFGLGTVGLAVA 211
+ + L A
Sbjct: 159 A--------LLLMKDKPKDLIKA 173
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 53.3 bits (127), Expect = 4e-09
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228
+ + L +PTG A V PGS V V G G VGLA A A+ GA+ VI D++
Sbjct: 1 IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLN 59
Query: 229 PKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273
P + AK G D +Q+ L + VD + + +G
Sbjct: 60 PARLAHAKAQGFEIADLSLDTP-LHEQIAALLGEPEVDCAVDAVG 103
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 51.1 bits (121), Expect = 2e-08
Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 2/121 (1%)
Query: 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228
LD + + C T A + G V + G G +GL A++ GA VI I
Sbjct: 3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62
Query: 229 PKKFDRAKNFGVTEFVNPKDH--DKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286
P + A+ G +N ++ ++ + ++ G D+ E G+ + E
Sbjct: 63 PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122
Query: 287 K 287
+
Sbjct: 123 R 123
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.9 bits (118), Expect = 4e-08
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 2/108 (1%)
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
G+ A V G V V G G +G+ AKA GA++V+ D+ + +AK G
Sbjct: 14 VGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA 72
Query: 241 TEFVNPKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHK 287
+ V+ G + + EC G + ++A +
Sbjct: 73 DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRS 120
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 49.9 bits (118), Expect = 4e-08
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Query: 175 LGCGVPTGLGAVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFD 233
L T AV A+ + PG+ VA+ G+G +G + K + VI +D+ +K
Sbjct: 12 LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71
Query: 234 RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
A+ G V+ + P++QV+ GV+ + + +G+ + + +
Sbjct: 72 LAERLGADHVVDARRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGR 123
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 150 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.6 bits (109), Expect = 4e-07
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
Query: 11 KAAVAWEPNKPLVIE---DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP-EGLFPCI 66
+A +E P V++ D+ V P+ +V IK+ + + Y SG + L P
Sbjct: 4 RAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYT 63
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 105
G + AG++E+VG+ + + GD V ++
Sbjct: 64 PGSDVAGVIEAVGDNASAFKKGDRVFTSSTISGGYAEYA 102
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 44.4 bits (104), Expect = 1e-06
Identities = 14/59 (23%), Positives = 21/59 (35%)
Query: 11 KAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGH 69
KA V PL + D+ + GEV +++ L D G L P +
Sbjct: 2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPG 60
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 41.8 bits (97), Expect = 2e-05
Identities = 10/93 (10%), Positives = 26/93 (27%), Gaps = 3/93 (3%)
Query: 9 TCKAAVAWEPNKPLV--IEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCI 66
+A V + ++ + + G+V +++ ++++ + D
Sbjct: 3 AFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKT-YP 61
Query: 67 LGHEAAGIVESVGEGVTEVQPGDHVIPCYQAEC 99
V + GD VI
Sbjct: 62 FVPGIDLAGVVVSSQHPRFREGDEVIATGYEIG 94
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 40.9 bits (94), Expect = 5e-05
Identities = 16/104 (15%), Positives = 30/104 (28%), Gaps = 5/104 (4%)
Query: 7 VITCKAAVAWEPNKP-----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG 61
+IT +A + + +P ++ EV +K L + + +D G P
Sbjct: 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSK 60
Query: 62 LFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFC 105
EG+ EV + +A
Sbjct: 61 PAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSH 104
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Score = 40.7 bits (94), Expect = 6e-05
Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 5/110 (4%)
Query: 181 TGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240
G+ A A V+ G+ V V G G +GL AKA GA V + + AKN G
Sbjct: 14 VGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR-RLEVAKNCGA 71
Query: 241 TEFVNPKDHDKPIQQVLV---DLTDGGVDYSFECIGNVSVMRAALECCHK 287
+ + ++ + + +C GN + +
Sbjct: 72 DVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRT 121
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 202 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.8 bits (89), Expect = 3e-04
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
+++FGLG VG A A G VIG+D+ K D +
Sbjct: 3 ISIFGLGYVGAVCAGCLSARG-HEVIGVDVSSTKIDLINQGKSPIVEPGLEA 53
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Score = 38.4 bits (88), Expect = 3e-04
Identities = 28/123 (22%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIG 224
PQ L V L C T + + PG V V G+G +G + A A GA V
Sbjct: 2 PQEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAF 60
Query: 225 IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALEC 284
K + AK G E VN ++ D+ + D+ + +
Sbjct: 61 TT-SEAKREAAKALGADEVVNSRNADEMAAHL------KSFDFILNTVAAPHNLDDFTTL 113
Query: 285 CHK 287
+
Sbjct: 114 LKR 116
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 37.7 bits (86), Expect = 7e-04
Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 2/113 (1%)
Query: 175 LGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234
T + T +++P +A A +++IG +K
Sbjct: 9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68
Query: 235 AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287
A G + +N ++ D + + L ++T G +L+C +
Sbjct: 69 ALKAGAWQVINYREED--LVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQR 119
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Score = 37.7 bits (86), Expect = 7e-04
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249
+AV G G VGL++ + + V +DI P K D+ N ++
Sbjct: 3 IAVAGSGYVGLSLG--VLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEY 52
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 36.9 bits (84), Expect = 7e-04
Identities = 26/84 (30%), Positives = 35/84 (41%)
Query: 22 LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81
L + A P E++++ + D Y SG P P LG EAAGIV VG G
Sbjct: 15 LQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSG 74
Query: 82 VTEVQPGDHVIPCYQAECRECKFC 105
V ++ GD V+ A
Sbjct: 75 VKHIKAGDRVVYAQSALGAYSSVH 98
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 291 | |||
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 100.0 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 100.0 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 100.0 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 100.0 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 100.0 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 100.0 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 100.0 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 100.0 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 100.0 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 100.0 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 100.0 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 100.0 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.98 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.97 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.97 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.97 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.97 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.94 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.91 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.91 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.9 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.89 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.89 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.88 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.88 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.88 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.87 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.87 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.87 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.87 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.86 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.85 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.84 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.82 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.82 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.82 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.81 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.81 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.81 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.81 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.81 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.8 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.79 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.77 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.76 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.76 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.75 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.67 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.63 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.62 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.59 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.41 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 97.93 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 97.79 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.75 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.72 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 97.69 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 97.58 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 97.54 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 97.47 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 97.43 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 97.41 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 97.32 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 97.31 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.27 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 97.26 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 97.26 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 97.25 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 97.24 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 97.23 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.21 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.2 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.2 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.19 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.18 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.17 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 97.17 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 97.16 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 97.15 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.11 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 97.09 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.09 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 97.06 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.06 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 97.05 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.03 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 97.03 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.02 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.02 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.02 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.01 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 97.0 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 96.99 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 96.95 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 96.94 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 96.93 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 96.93 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 96.93 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 96.92 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.92 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 96.89 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 96.88 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 96.88 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.88 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 96.87 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 96.85 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 96.84 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 96.82 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 96.81 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 96.75 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 96.73 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 96.68 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 96.64 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 96.62 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.62 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 96.62 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.58 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 96.53 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 96.48 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 96.48 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 96.43 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 96.4 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 96.36 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.33 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 96.3 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 96.29 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.29 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.24 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 96.21 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 96.16 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 96.13 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 96.04 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 95.94 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 95.92 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.89 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 95.89 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 95.89 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 95.78 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 95.78 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 95.73 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.69 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 95.68 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 95.55 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.48 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 95.4 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 95.38 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 95.37 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 95.34 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 95.33 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.3 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 95.3 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.29 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.25 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 95.18 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 95.18 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 95.15 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 95.11 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 95.1 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.06 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 94.92 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 94.89 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 94.86 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.82 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 94.77 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 94.72 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 94.69 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 94.66 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 94.61 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.6 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 94.6 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.6 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 94.54 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 94.51 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 94.44 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.31 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 94.25 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 94.24 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 94.23 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 94.18 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 94.15 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 94.1 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 94.07 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 94.03 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 94.02 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.98 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 93.98 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 93.89 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 93.88 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 93.83 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 93.72 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 93.68 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.61 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 93.55 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 93.52 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 93.52 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 93.48 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 93.44 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 93.44 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 93.43 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 93.42 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 93.31 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 93.28 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 93.27 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 93.26 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.23 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 93.19 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 93.17 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.16 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 93.13 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 93.12 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 93.1 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.1 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 92.95 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 92.89 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 92.88 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 92.81 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 92.8 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 92.77 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 92.75 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 92.7 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 92.65 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 92.65 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 92.6 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 92.55 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 92.47 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 92.36 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 92.31 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 92.24 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 92.24 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 92.21 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 92.1 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 92.06 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 92.06 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 92.04 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 92.03 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 91.88 | |
| d1ne2a_ | 197 | Hypothetical protein Ta1320 {Archaeon Thermoplasma | 91.79 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 91.77 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 91.74 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 91.74 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 91.73 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 91.69 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 91.64 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 91.63 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 91.6 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 91.52 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 91.29 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 91.24 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 91.14 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.05 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 90.99 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 90.95 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 90.89 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 90.87 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.87 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 90.84 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 90.78 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 90.71 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 90.7 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 90.68 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 90.67 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 90.65 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 90.41 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.4 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 90.37 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 90.35 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 90.33 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 90.16 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 90.15 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 90.14 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 90.1 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 90.1 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 90.09 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 90.03 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 90.03 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 89.98 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 89.84 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 89.74 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 89.67 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 89.56 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 89.54 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 89.39 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 89.37 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 89.32 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 89.24 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 89.08 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 89.02 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 88.96 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 88.92 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 88.86 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 88.78 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 88.77 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 88.69 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 88.69 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.58 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 88.53 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 88.41 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 88.32 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 88.2 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 88.18 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 88.1 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 88.08 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 87.89 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 87.83 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 87.78 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 87.76 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 87.66 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 87.59 | |
| d3lada1 | 229 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 87.38 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 87.31 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.3 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 87.2 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 87.13 | |
| d3grsa1 | 221 | Glutathione reductase {Human (Homo sapiens) [TaxId | 87.02 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 86.91 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 86.8 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 86.78 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 86.6 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 86.33 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 86.32 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 86.32 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 86.14 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 85.72 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 85.65 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 85.48 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 85.29 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 85.23 | |
| d1o58a_ | 293 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 85.05 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 85.04 | |
| d1h6va1 | 235 | Mammalian thioredoxin reductase {Rat (Rattus norve | 84.9 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 84.87 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 84.84 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 84.78 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 84.43 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 84.43 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 84.43 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 84.3 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 84.28 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 84.27 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 84.25 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 84.14 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 84.11 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 84.09 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 83.79 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 83.7 | |
| d1qo8a2 | 317 | Flavocytochrome c3 (respiratory fumarate reductase | 83.4 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.25 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 83.02 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.81 | |
| d1onfa1 | 259 | Glutathione reductase {Plasmodium falciparum [TaxI | 82.7 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 82.45 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 82.11 | |
| d1d4ca2 | 322 | Flavocytochrome c3 (respiratory fumarate reductase | 81.95 | |
| d2bs2a2 | 336 | Fumarate reductase {Wolinella succinogenes [TaxId: | 81.46 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 81.32 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 81.2 | |
| d2gmha1 | 380 | Electron transfer flavoprotein-ubiquinone oxidored | 81.01 | |
| d2esra1 | 152 | Putative methyltransferase SPy1538 {Streptococcus | 80.91 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 80.88 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 80.87 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 80.69 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 80.61 | |
| d1mo9a1 | 261 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 80.59 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 80.52 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 80.22 | |
| d1wg8a2 | 182 | TM0872, methyltransferase domain {Thermus thermoph | 80.1 |
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=100.00 E-value=1.1e-38 Score=265.46 Aligned_cols=198 Identities=48% Similarity=0.776 Sum_probs=183.1
Q ss_pred CCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 3 TEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 3 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
+..+++++||+++++++++++++|++.|+|+++|||||++++|||++|++++.+......+|.++|||++|+|+++|+.+
T Consensus 2 ~~~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v 81 (199)
T d1cdoa1 2 TVGKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGV 81 (199)
T ss_dssp CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTC
T ss_pred CCCCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCC
Confidence 34567999999999999999999999999999999999999999999999999987777899999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEE
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAK 162 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (291)
++|++||||++.+...|+.|.+|+.+..+.|.+.......+.. .+|..+...+|...+++...|+|+||+.++.+.+++
T Consensus 82 ~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~ 160 (199)
T d1cdoa1 82 TEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVM-SPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAK 160 (199)
T ss_dssp CSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTT-SCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEE
T ss_pred ceecCCCEEEEeeeccccccccccCCCcccccccccccccccc-cCcccceeeccceeecccccCCceEEEEEchHHEEE
Confidence 9999999999999999999999999999999997765544444 677888888899999988899999999999999999
Q ss_pred cCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 163 IDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 163 iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
||+++++++++++.+++.|++.++......+.|++|||+
T Consensus 161 iP~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 161 IDPSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp CCTTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 999999999999999999999999888889999999985
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=100.00 E-value=1.9e-37 Score=257.36 Aligned_cols=196 Identities=57% Similarity=0.886 Sum_probs=177.4
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
+..++|||+++.+++++|+++++|.|+|+++||||||+++|||++|+++++|.+....+|.++|||++|+|+++|+.++.
T Consensus 2 ~~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~ 81 (197)
T d2fzwa1 2 NEVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTK 81 (197)
T ss_dssp CCCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCS
T ss_pred CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCcee
Confidence 45689999999999999999999999999999999999999999999999998877789999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|++.+...|+.|..|..++...|.+.......+.. .+...++..+|..++++.+.|+|+||+.++..+++++|
T Consensus 82 ~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~-~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp 160 (197)
T d2fzwa1 82 LKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKID 160 (197)
T ss_dssp CCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCC-TTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred cCCCCEEEEccccccccccccccCccccCcccccccccccc-CCccceeccCCcceecccccccceeEEEechHHEEECC
Confidence 99999999999999999999999999999986554444444 56666777788888889889999999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
+++++++++.+.+++.|++.++......+.+++|||+
T Consensus 161 ~~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 161 PLIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp TTSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred CCCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 9999999999999999999987666666788899885
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=100.00 E-value=1.1e-35 Score=248.04 Aligned_cols=194 Identities=46% Similarity=0.809 Sum_probs=169.2
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.++++|||+++.+++++++++++|.|.|+++||||||+++|||++|++++.|.++ ..+|.++|||++|+|+++|+++++
T Consensus 4 ~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~~ 82 (202)
T d1e3ia1 4 GKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVTN 82 (202)
T ss_dssp TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCCS
T ss_pred CCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCcee
Confidence 4679999999999999999999999999999999999999999999999998765 467999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCC---CceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATG---AGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~---~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
|++||+|++.+...|+.|.+|..++.+.|.+...... .+....++..+++.+|..++++.+.|+|+||+.++..+++
T Consensus 83 ~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~l~ 162 (202)
T d1e3ia1 83 FKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEANLA 162 (202)
T ss_dssp CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEE
T ss_pred ccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhhEE
Confidence 9999999999999999999999999999998765311 1122245667778889999999999999999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEc
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 202 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G 202 (291)
++|++++++.++.+.+++.+.+.++. .+++|++|.|+.
T Consensus 163 ~lP~~~~~~~~~~~~~~~~~~~~a~~---~~k~G~~V~vi~ 200 (202)
T d1e3ia1 163 RVDDEFDLDLLVTHALPFESINDAID---LMKEGKSIRTIL 200 (202)
T ss_dssp ECCTTSCGGGGEEEEEEGGGHHHHHH---HHHTTCCSEEEE
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCEEEEEE
Confidence 99999999988888888887777552 257899887763
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=100.00 E-value=3.7e-35 Score=242.79 Aligned_cols=190 Identities=28% Similarity=0.542 Sum_probs=157.1
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQP 87 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~ 87 (291)
++|+|+++...+++|++++++.|+|+++|||||+++++||++|++++.|.++. ++|.++|||++|+|+++|+.+++|++
T Consensus 2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~~-~~P~i~GHE~~G~V~~vG~~v~~~~v 80 (194)
T d1f8fa1 2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYPV-PLPAVLGHEGSGIIEAIGPNVTELQV 80 (194)
T ss_dssp EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhcccc-cCCcccccceEEEeeecCccceeEcc
Confidence 57999999999999999999999999999999999999999999999988654 68999999999999999999999999
Q ss_pred CCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccC--CCceecccCCcceeeeEEecccceEEcCC
Q 022865 88 GDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSIN--GKPIYHFMGTSTFSQYTVVHDVSVAKIDP 165 (291)
Q Consensus 88 Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~iP~ 165 (291)
||||+..+ .+|+.|.+|+.++++.|++.......|.. .+|..++... +....++++.|+|+||..++..+++++|+
T Consensus 81 GDrVv~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~-~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~ 158 (194)
T d1f8fa1 81 GDHVVLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGAD-SEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK 158 (194)
T ss_dssp TCEEEECC-CCCSSSHHHHTTCGGGCTTHHHHSSSSSC-SSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred Cceeeeec-ccccCChhhhCCCcccccccccceecccc-ccceeeeecCCceeeccccccccccceeEEEehHHEEECCC
Confidence 99996554 48999999999999999986443333333 3343332222 22333456778999999999999999999
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEE
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGI 225 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~ 225 (291)
+++++++ +++.|+|++|++++|+++.+|+.+|+++
T Consensus 159 ~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 159 DFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp TCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEEEC
T ss_pred CCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEEEe
Confidence 9876543 4556889999999999999999777765
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=100.00 E-value=4.4e-35 Score=239.50 Aligned_cols=169 Identities=24% Similarity=0.424 Sum_probs=149.9
Q ss_pred EEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 12 AAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 12 a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|+++.++++ +++++++.|+|+++|||||+++++||++|++++.+... ..++|.++|||++|+|+++|+++++|++|
T Consensus 4 aAVl~g~~~-l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~G 82 (178)
T d1e3ja1 4 SAVLYKQND-LRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKG 82 (178)
T ss_dssp EEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTT
T ss_pred EEEEEcCCc-EEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCC
Confidence 445667766 99999999999999999999999999999998876532 23678999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|||+..+...|+.|..|..++.+.|++.... +....+| +|+||+.++.++++++|++++
T Consensus 83 drV~~~~~~~~~~c~~c~~g~~~~c~~~~~~---~~~~~~G------------------~~aey~~v~~~~~~~iP~~~~ 141 (178)
T d1e3ja1 83 DRVAVEPGVPCRRCQFCKEGKYNLCPDLTFC---ATPPDDG------------------NLARYYVHAADFCHKLPDNCN 141 (178)
T ss_dssp CEEEECCEECCSSSHHHHTTCGGGCTTCEET---TBTTBCC------------------SCBSEEEEEGGGEEECCTTCC
T ss_pred CEEEECcccccCCccccccCCccccccccce---ecccccc------------------ccceeeeecccceeeCCCCCC
Confidence 9999999999999999999999999987652 3322344 999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 203 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~ 203 (291)
+++++.+.+++.|+|+++ +..++++|++|+|+|+
T Consensus 142 ~~~aa~~~~~~~ta~~a~-~~~~~~~g~~VlVig~ 175 (178)
T d1e3ja1 142 VKQLVTHSFKLEQTVDAF-EAARKKADNTIKVMIS 175 (178)
T ss_dssp CGGGEEEEEEGGGHHHHH-HHHHHCCTTCSEEEEE
T ss_pred HHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEEcc
Confidence 999999999999999986 6789999999999975
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=100.00 E-value=3.3e-34 Score=238.10 Aligned_cols=195 Identities=49% Similarity=0.771 Sum_probs=167.1
Q ss_pred CCCCcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 2 STEGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 2 ~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
|+...+++|||+++..+++++++++++.|.|+++||||||.++|||++|+++++|.++. ++|.++|||++|+|+++|+.
T Consensus 1 ~~~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~~-~~P~i~GHE~~G~Vv~vG~~ 79 (198)
T d2jhfa1 1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEG 79 (198)
T ss_dssp CCTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTT
T ss_pred CCCCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCccc-ccceecccceeEEEEecCcc
Confidence 34457799999999999999999999999999999999999999999999999998654 68999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
++++++||+|++.+...|+.|.+|..+..+.|.+.......+.. .++..++..+|...+.+...|+|+||++++..+++
T Consensus 80 v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~ 158 (198)
T d2jhfa1 80 VTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTM-QDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA 158 (198)
T ss_dssp CCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred ccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccc-cCccccccccCceeccCCCCCcccCeEEeCHHHeE
Confidence 99999999999999999999999999999999998776555544 56667778888888888899999999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
++|+.++++.++...+++.+... ....+++|++|+|+
T Consensus 159 ~~p~~~~~e~l~~~~~~~~~v~~---g~~~l~~G~~VaVi 195 (198)
T d2jhfa1 159 KIDAAFALDPLITHVLPFEKINE---GFDLLRSGESIRTI 195 (198)
T ss_dssp ECCTTSCCGGGEEEEEEGGGHHH---HHHHHHTTCCSEEE
T ss_pred ECCCCCCHHHHHHHHHHHHhhhh---CCceeeCCCEEEEE
Confidence 99999988765554434333221 22346788988876
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=100.00 E-value=8.1e-35 Score=241.56 Aligned_cols=193 Identities=48% Similarity=0.829 Sum_probs=164.4
Q ss_pred CcccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCC
Q 022865 5 GQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 5 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+.++|||+++++++++++++|++.|.|+++||||||.++|||++|+++++|..+. .+|.++|||++|+|+++|+.+.+
T Consensus 4 ~~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~~-~~P~i~GHE~~G~Vv~~G~~v~~ 82 (198)
T d1p0fa1 4 GKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPS-KFPVILGHEAVGVVESIGAGVTC 82 (198)
T ss_dssp TSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSCC-CSSBCCCCCEEEEEEEECTTCCS
T ss_pred CCceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeecccc-ccccccceeeeeeeeecCccccc
Confidence 35689999999999999999999999999999999999999999999999987653 68999999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||||++.+...|+.|.+|..+..++|++.......|.. .++..++..++..++.....++|+||+.++...++++|
T Consensus 83 ~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip 161 (198)
T d1p0fa1 83 VKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLM-ADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKID 161 (198)
T ss_dssp CCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSC-TTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEEC
T ss_pred CcCCCEEEEEeeccccccccccccccccchhhhcccccccc-CCCceeEeeCCeeccccCCCccceeeEEecHHHEEECC
Confidence 99999999999999999999999999999987665433333 55666777788888888889999999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHH
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLA 209 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ 209 (291)
+++++..++...+.. ..+.+++.|||.|+|++|++
T Consensus 162 ~~~~~~~~~~~~~~~----------~~v~~~~~vlv~G~G~iGl~ 196 (198)
T d1p0fa1 162 PKINVNFLVSTKLTL----------DQINKAFELLSSGQGVRSIM 196 (198)
T ss_dssp TTSCGGGGEEEEECG----------GGHHHHHHHTTTSSCSEEEE
T ss_pred CCCCHHHHHHhhcch----------hhcCCCCEEEEECCCcceEE
Confidence 999876654433322 22334456888888888753
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=4.9e-34 Score=232.61 Aligned_cols=172 Identities=30% Similarity=0.408 Sum_probs=151.4
Q ss_pred cccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 022865 6 QVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.|.+|||+++.++++++++++++.|.|+++|||||+++++||++|++.++|.++. ..+|.++|||++|+|+++|+.+++
T Consensus 2 ~P~tMkA~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v~~ 81 (175)
T d1llua1 2 LPQTMKAAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTR 81 (175)
T ss_dssp CCSEEEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCS
T ss_pred cchhcEEEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCccc
Confidence 5789999999999999999999999999999999999999999999999998753 478999999999999999999999
Q ss_pred CCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 85 VQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 85 ~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
|++||||+..+. ..|+.|.+|..+..+.|.+... .|+. .+| +|+||+.++.++++++
T Consensus 82 ~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~---~G~~-~~g------------------g~aey~~v~~~~~~~i 139 (175)
T d1llua1 82 VKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQN---TGYS-VNG------------------GYAEYVLADPNYVGIL 139 (175)
T ss_dssp CCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEE---BTTT-BCC------------------SSBSEEEECTTTSEEC
T ss_pred cccCCEEEeccccccCCccccccCCcccccccccc---cccc-ccc------------------ccceEEEechHHEEEC
Confidence 999999987765 5799999999999999998765 2332 333 8999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
|+++++..++++..++.|+++.+ +.. ..+|++|||+
T Consensus 140 Pd~l~~~~a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl 175 (175)
T d1llua1 140 PKNVKATIHPGKLDDINQILDQM-RAG-QIEGRIVLEM 175 (175)
T ss_dssp CTTCCCCEEEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred CCCCChhHHHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence 99999988888888888888865 333 3469999985
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=100.00 E-value=1e-33 Score=229.80 Aligned_cols=166 Identities=29% Similarity=0.371 Sum_probs=149.5
Q ss_pred eEEEEecCCCCeEEEeeecCCC-CCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCCCC
Q 022865 11 KAAVAWEPNKPLVIEDVQVAPP-QAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 11 ~a~~~~~~~~~~~~~~~~~~~~-~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
||+++.+.+++|++++++.|++ +++|||||+++++||++|++.+.|..+ ...+|.++|||++|+|+++|+++++|+
T Consensus 1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~ 80 (171)
T d1h2ba1 1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80 (171)
T ss_dssp CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence 7999999999999999999985 689999999999999999999988763 336899999999999999999999999
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||||++.+...|+.|..|..++.++|.+... .|+. .+| +|+||+.++.++++++|++
T Consensus 81 ~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~iP~~ 138 (171)
T d1h2ba1 81 KGDPVILHPAVTDGTCLACRAGEDMHCENLEF---PGLN-IDG------------------GFAEFMRTSHRSVIKLPKD 138 (171)
T ss_dssp TTCEEEECSCBCCSCSHHHHTTCGGGCTTCBC---BTTT-BCC------------------SSBSEEEECGGGEEECCTT
T ss_pred CCCEEEEcCccCCCCccccccccccccccccc---ceee-ccc------------------ccceeeeehhhcceecCCC
Confidence 99999999999999999999999999998765 3333 334 9999999999999999999
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEE
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI 200 (291)
++++.++++.++++|+|+++ +...+ .|++|||
T Consensus 139 ~~~e~aa~~~~~~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 139 VRVEVDIHKLDEINDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp CCCCEEEEEGGGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred CCHHHHHHHHhHHHHHHHHH-HhcCC-CCCEEEe
Confidence 99988888888999999987 55777 8999998
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.2e-33 Score=229.64 Aligned_cols=172 Identities=23% Similarity=0.300 Sum_probs=148.0
Q ss_pred cceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC---CCCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP---EGLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
..++|++++++++ +++++++.|+|+++||||||++++||++|++++.+... ..++|.++|||++|+|+++|+++++
T Consensus 6 p~~~a~V~~gp~~-l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~ 84 (185)
T d1pl8a1 6 PNNLSLVVHGPGD-LRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKH 84 (185)
T ss_dssp CCCEEEEEEETTE-EEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCS
T ss_pred CCCEEEEEeCCCe-EEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceee
Confidence 4678999999976 99999999999999999999999999999999875432 3367899999999999999999999
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||||++.+...|+.|.+|+.++.+.|.+... .|....+| +|+||+.++.++++++|
T Consensus 85 ~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~---~g~~~~~G------------------~~aey~~~~~~~~~~lP 143 (185)
T d1pl8a1 85 LKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFF---CATPPDDG------------------NLCRFYKHNAAFCYKLP 143 (185)
T ss_dssp CCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEE---TTBTTBCC------------------SCBSEEEEEGGGEEECC
T ss_pred ecccccceecceeccccchhhccchhchhcccee---eecccccc------------------cceEEEEEchHHEEECC
Confidence 9999999999999999999999999999998765 33332344 89999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCCh
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGT 205 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~ 205 (291)
+++++++++++ ++.++++++ +..++++|++||| |+|+
T Consensus 144 ~~~~~~~aa~~--pl~~a~~a~-~~~~~~~G~~VlI-g~GP 180 (185)
T d1pl8a1 144 DNVKPLVTHRF--PLEKALEAF-ETFKKGLGLKIML-KCDP 180 (185)
T ss_dssp TTCGGGEEEEE--EGGGHHHHH-HHHHTTCCSEEEE-ECCT
T ss_pred CCCCHHHHHHH--HHHHHHHHH-HHhCCCCCCEEEE-EeCC
Confidence 99999988765 345667654 5677899999988 6554
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=8.4e-33 Score=226.26 Aligned_cols=174 Identities=24% Similarity=0.370 Sum_probs=145.3
Q ss_pred ccceeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCC---
Q 022865 7 VITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVT--- 83 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~--- 83 (291)
++++||++++++++++++++++.|.|+++||||||.++|||++|++++.|..+..++|.++|||++|+|+++|++++
T Consensus 2 ~~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~ 81 (184)
T d1vj0a1 2 GLKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLN 81 (184)
T ss_dssp CEEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTT
T ss_pred CceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEeccccccc
Confidence 47899999999999999999999999999999999999999999999999887778999999999999999999886
Q ss_pred --CCCCCCEEeecCCCCCCCChhhhCCCCC-CCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEec-ccc
Q 022865 84 --EVQPGDHVIPCYQAECRECKFCKSGKTN-LCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVH-DVS 159 (291)
Q Consensus 84 --~~~~Gd~V~~~~~~~~~~c~~c~~~~~~-~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~ 159 (291)
.+++||+|++.+..+|+.|.+|+.++.. .|+++.. +|+. +.+.......|+|+||+.++ .++
T Consensus 82 ~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~---~G~~-----------~~~~~~~~~~Gg~ae~~~v~~~~~ 147 (184)
T d1vj0a1 82 GELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKV---YGIN-----------RGCSEYPHLRGCYSSHIVLDPETD 147 (184)
T ss_dssp SCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEE---TTTT-----------CCSSSTTCCCSSSBSEEEECTTCC
T ss_pred cccccceeeeEeccccccccChhHhCccccccCCCcee---eccC-----------CCCCCCCCcceeCcCcEEechhHc
Confidence 4689999999999999999999999865 5887654 2221 00000011245999999995 579
Q ss_pred eEEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 160 VAKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 160 ~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
++++|++++++. ++.+|++++ +...+++|++|||+
T Consensus 148 v~~ip~~l~~~~------pl~~A~~a~-~~~~~~~G~~VlI~ 182 (184)
T d1vj0a1 148 VLKVSEKITHRL------PLKEANKAL-ELMESREALKVILY 182 (184)
T ss_dssp EEEECTTCCEEE------EGGGHHHHH-HHHHHTSCSCEEEE
T ss_pred EEECCCCCCHHH------HHHHHHHHH-HHhCCCcCCEEEEe
Confidence 999999998653 355677765 67889999999997
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=100.00 E-value=1.8e-34 Score=235.07 Aligned_cols=171 Identities=21% Similarity=0.196 Sum_probs=141.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||+++.++++ ++++|+|.|.|+++|||||++++|||++|++.+.+.....++|.++|||++|+|+++|+++++|++||
T Consensus 1 MKa~v~~~~~~-l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGd 79 (177)
T d1jqba1 1 MKGFAMLGINK-LGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGD 79 (177)
T ss_dssp CEEEEEEETTE-EEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEEeCCC-eEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCC
Confidence 89999999988 99999999999999999999999999999988766555567899999999999999999999999999
Q ss_pred EEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc--cceEEcCCCC
Q 022865 90 HVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSVAKIDPQA 167 (291)
Q Consensus 90 ~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~iP~~~ 167 (291)
||++.+..+|+.|.+|..+..+.|.+......+|.. .+ |+|+||+.++. .+++++|+++
T Consensus 80 rV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~-~~------------------G~~aEy~~vp~a~~~l~~iP~~~ 140 (177)
T d1jqba1 80 RVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNF-KD------------------GVFGEYFHVNDADMNLAILPKDV 140 (177)
T ss_dssp EEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTT-BC------------------CSSBSSEEESSHHHHCEECCTTS
T ss_pred cEEEeeeeccccccchhhhhhcccccccccccccCC-CC------------------hhcCeeEEEEhhhCeEEECCCCc
Confidence 999999999999999999999999987543222222 23 49999999985 4799999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHH
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVA 211 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai 211 (291)
++++++... .+++..+ ++.++|+|+|++|++++
T Consensus 141 ~~~~~~~~~---~~~~~~~--------~~~vlv~g~gp~gl~aa 173 (177)
T d1jqba1 141 DLSKLVTHV---YHGFDHI--------EEALLLMKDKPKDLIKA 173 (177)
T ss_dssp CGGGGEEEE---EESGGGH--------HHHHHHHHHCCTTCSEE
T ss_pred chHHHHHHH---HHHHHHh--------cCceEEECCCHHHhhee
Confidence 987765432 2233322 23477778888876543
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.98 E-value=2.9e-32 Score=224.75 Aligned_cols=180 Identities=18% Similarity=0.245 Sum_probs=151.4
Q ss_pred cccceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC-
Q 022865 6 QVITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV- 82 (291)
Q Consensus 6 ~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~- 82 (291)
.|.+|||+++..+++. +++.+++.++++++|||||+.++|||++|++++.|.++..++|+++|||++|+|+++|+++
T Consensus 3 ~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~v~ 82 (192)
T d1piwa1 3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN 82 (192)
T ss_dssp TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred CCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccccc
Confidence 4889999999987663 7778888777899999999999999999999999988877899999999999999999987
Q ss_pred CCCCCCCEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 83 TEVQPGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
+.+++||||.+.+. ..|+.|.+|..++.+.|.+....... ...+| ....|+|+||+.++.++++
T Consensus 83 ~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~--~~~~G-------------~~~~Ggfaey~~v~~~~~~ 147 (192)
T d1piwa1 83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQ--PYEDG-------------YVSQGGYANYVRVHEHFVV 147 (192)
T ss_dssp SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSC--BCTTS-------------CBCCCSSBSEEEEEGGGEE
T ss_pred cccCCCCeeeEeeeccCCCCchhhhcCCccccccccccccc--ccccc-------------cccccceeeEEEeehHHeE
Confidence 56999999987765 57999999999999999987543111 00112 2234599999999999999
Q ss_pred EcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 162 KIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 162 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
++|++++++.|+.+...+.|||+++ +..+++++++|||.
T Consensus 148 ~iP~~l~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~ 186 (192)
T d1piwa1 148 PIPENIWVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGY 186 (192)
T ss_dssp ECCTTCCEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECC
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEE
Confidence 9999999988776655577999976 67899999999985
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.97 E-value=1.2e-31 Score=217.48 Aligned_cols=168 Identities=30% Similarity=0.472 Sum_probs=142.3
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCC-CCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKD-PEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++++.++++++++++.|.|++|||||||++++||++|++.+++.. ....+|.++|||++|+|+++|+.++++++|
T Consensus 1 MkA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vG 80 (171)
T d1rjwa1 1 MKAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVG 80 (171)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred CeEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceee
Confidence 8999999999999999999999999999999999999999999887654 444789999999999999999999999999
Q ss_pred CEEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCC
Q 022865 89 DHVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQA 167 (291)
Q Consensus 89 d~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~ 167 (291)
|+|++.+. ..|+.|..|..+..+.|.+... .|.. .+| +|+||+.++.++++++|+++
T Consensus 81 drV~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~-~~G------------------~~aey~~v~~~~~~~iP~~~ 138 (171)
T d1rjwa1 81 DRVGIPWLYSACGHCDYCLSGQETLCEHQKN---AGYS-VDG------------------GYAEYCRAAADYVVKIPDNT 138 (171)
T ss_dssp CEEEECSEEECCSCSHHHHTTCGGGCTTCEE---BTTT-BCC------------------SSBSEEEEEGGGCEECCTTC
T ss_pred eEEeeccccccccccccccCCCccccccccc---ccee-ccC------------------ccccceEecHHHEEECCCCC
Confidence 99987765 5688999999999999988765 3332 334 99999999999999999999
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 203 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~ 203 (291)
+++.|++ . ...++++++. ...+ +|++|||+|.
T Consensus 139 ~~e~A~l-~-~~~~~~~~~~-~~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 139 IIEVQPL-E-KINEVFDRML-KGQI-NGRVVLTLED 170 (171)
T ss_dssp CEEEEEG-G-GHHHHHHHHH-TTCC-SSEEEEECCC
T ss_pred CHHHHHH-H-HHHHHHHHHH-hcCC-CCCEEEEeCC
Confidence 9876653 3 3456666553 3455 5999999985
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.97 E-value=6.1e-34 Score=236.51 Aligned_cols=191 Identities=21% Similarity=0.256 Sum_probs=153.5
Q ss_pred eeEEEEecCCCCeEEEeeecCCC-------CCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPP-------QAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGV 82 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~-------~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~ 82 (291)
.||+++.++++ ++++|++.|++ .++|||||+.+++||++|++++.|.++ ..+|.++|||++|+|+++|+++
T Consensus 2 ~kA~v~~~~~~-le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V 79 (201)
T d1kola1 2 NRGVVYLGSGK-VEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDV 79 (201)
T ss_dssp EEEEEEEETTE-EEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTC
T ss_pred cEEEEEeCCCc-eEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeecccccc
Confidence 58999999987 99999999864 469999999999999999999998765 4689999999999999999999
Q ss_pred CCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecc--cce
Q 022865 83 TEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHD--VSV 160 (291)
Q Consensus 83 ~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~ 160 (291)
++|++||||.+.+..+|+.|.+|+.++.+.|.+.......+...... . ....|+|+||+.+|. .++
T Consensus 80 ~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~------~------~~~~Gg~aeyv~vp~~~~~l 147 (201)
T d1kola1 80 ENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVD------M------GDWTGGQAEYVLVPYADFNL 147 (201)
T ss_dssp CSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTT------S------CCBCCCSBSEEEESSHHHHC
T ss_pred ccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccC------C------CccccccccEEEeehHHCeE
Confidence 99999999999999999999999999999998765432222210000 0 112359999999975 479
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA 219 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~ 219 (291)
++||++.++.+++.+..++.++++++ ...+.+.+ ++|+|++|++++|+||++|+
T Consensus 148 ~~iPd~~~~~~~~~~~~~~~~~~~a~-~~~~~~~g----~~g~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 148 LKLPDRDKAMEKINIAEVVGVQVISL-DDAPRGYG----EFDAGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp EECSCHHHHHHTCCHHHHHTEEEECG-GGHHHHHH----HHHHTCSCEEEECTTCSSCC
T ss_pred EECCCCCChHHHHHHHHHHHHHHHHH-HhCCCCCe----EEeeCHHHHHHHHHHHHcCC
Confidence 99999876666666666777787764 33443333 35889999999999999885
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.97 E-value=1.9e-31 Score=217.61 Aligned_cols=167 Identities=26% Similarity=0.410 Sum_probs=140.2
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCC--------CCCCCcccccceeEEEEEeCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDP--------EGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
|||+++.++|+++++++++.|+|++||||||+++++||++|+++++|.++ ..++|.++|||++|+|+++|+.
T Consensus 1 MKA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~ 80 (177)
T d1jvba1 1 MRAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDE 80 (177)
T ss_dssp CEEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTT
T ss_pred CeEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccC
Confidence 89999999999999999999999999999999999999999999988642 2368999999999999999999
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEeccc-ce
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV-SV 160 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~ 160 (291)
+++|++||+|++.+...|+.|.+|+.++.+.|.+... .|+. .+| +|+||+.++.. .+
T Consensus 81 v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~---~g~~-~~G------------------~~aey~~vp~~~~~ 138 (177)
T d1jvba1 81 VVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRW---LGIN-FDG------------------AYAEYVIVPHYKYM 138 (177)
T ss_dssp CCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEE---BTTT-BCC------------------SSBSEEEESCGGGE
T ss_pred ccccccCceEeeeeccccccccccccccccccCCcce---eeec-ccc------------------ccccEEEEEhHHeE
Confidence 9999999999999999999999999999999998755 2322 334 99999999754 56
Q ss_pred EEcCCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEE
Q 022865 161 AKIDPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAV 200 (291)
Q Consensus 161 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI 200 (291)
+++|+..+.+.++.+..++.++++++ ...++ .|++|||
T Consensus 139 ~~~~~~~~~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 139 YKLRRVKPMITKTMKLEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp EECSSSCCCCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred EECCCCChHHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 67666555555544456788888865 44554 5888887
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.97 E-value=2e-30 Score=211.41 Aligned_cols=160 Identities=26% Similarity=0.424 Sum_probs=131.0
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGD 89 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~Gd 89 (291)
|||++...++++|+++|++.|+|+++|||||+.++|||++|++++.|..+...+|.++|||++|+|+++|+.+++|++||
T Consensus 1 m~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGd 80 (179)
T d1uufa1 1 IKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGD 80 (179)
T ss_dssp CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTC
T ss_pred CeEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCC
Confidence 79999999999999999999999999999999999999999999999887778999999999999999999999999999
Q ss_pred EEeecCC-CCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 90 HVIPCYQ-AECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 90 ~V~~~~~-~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
+|.+.+. ..|+.|.+|+.++.++|++..... .+.....+ ....|+|+||+.++.++++++|+...
T Consensus 81 rV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~-~~~~~~~~-------------~~~~GgfaEy~~v~~~~~~~ip~~~~ 146 (179)
T d1uufa1 81 LVGVGCIVDSCKHCEECEDGLENYCDHMTGTY-NSPTPDEP-------------GHTLGGYSQQIVVHERYVLRIRVADI 146 (179)
T ss_dssp EEEECSEEECCSSSHHHHTTCGGGCTTCEETT-TSBCSSTT-------------SBCCCSSBSEEEEEGGGCEECCCCCE
T ss_pred EEEEcccccccCccccccCcccccCCCccccc-cccCCCCC-------------cccccccceEEEechHHEEECCCCCc
Confidence 9987764 689999999999999999865321 11110000 12235999999999999999996643
Q ss_pred hhhhhhhcccchhhhhhh
Q 022865 169 LDKVCLLGCGVPTGLGAV 186 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~ 186 (291)
....+ .++.++++++
T Consensus 147 ~~~~a---~~l~~a~~a~ 161 (179)
T d1uufa1 147 EMIRA---DQINEAYERM 161 (179)
T ss_dssp EEECG---GGHHHHHHHH
T ss_pred ChhHh---chhHHHHHHH
Confidence 32222 2445666654
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=3.5e-29 Score=198.48 Aligned_cols=146 Identities=20% Similarity=0.299 Sum_probs=131.0
Q ss_pred cceeEEEEecCCCC--eEEE-eeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCCCC
Q 022865 8 ITCKAAVAWEPNKP--LVIE-DVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVT 83 (291)
Q Consensus 8 ~~~~a~~~~~~~~~--~~~~-~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~~~ 83 (291)
+.|||+++.++|++ ++++ +++.|.|++|||||||++++||++|+..+.|.+... .+|.++|||++|+|+++|++++
T Consensus 1 ~~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~ 80 (150)
T d1yb5a1 1 KLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNAS 80 (150)
T ss_dssp CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCT
T ss_pred CceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceee
Confidence 36999999988775 7774 689999999999999999999999999999877554 7899999999999999999999
Q ss_pred CCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEc
Q 022865 84 EVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKI 163 (291)
Q Consensus 84 ~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 163 (291)
+|++||||+.... .+ |+|+||+.++.+.++++
T Consensus 81 ~~~vGdrV~~~~~------------------------------~~------------------G~~ae~~~v~~~~~~~i 112 (150)
T d1yb5a1 81 AFKKGDRVFTSST------------------------------IS------------------GGYAEYALAADHTVYKL 112 (150)
T ss_dssp TCCTTCEEEESCC------------------------------SS------------------CSSBSEEEEEGGGEEEC
T ss_pred ccccCcccccccc------------------------------cc------------------ccccccccccccccccc
Confidence 9999999975433 22 38999999999999999
Q ss_pred CCCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 164 DPQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 164 P~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
|+++++++|+++++...|+|+++......+.|+++||+
T Consensus 113 P~~ls~~~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 113 PEKLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp CTTCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred cCCCCHHHHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 99999999999999999999998888899999999984
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=5.7e-27 Score=185.02 Aligned_cols=141 Identities=22% Similarity=0.291 Sum_probs=121.4
Q ss_pred eEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 11 KAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 11 ~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
+++++..+|.+ |++++++.|.|++|||||||++++||++|+..+.|.++...+|.++|||++|+|+++|+++++|++|
T Consensus 2 ~~i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vG 81 (147)
T d1qora1 2 TRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAG 81 (147)
T ss_dssp EEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTT
T ss_pred eEEEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeeccccccc
Confidence 56788888876 9999999999999999999999999999999999998888899999999999999999999999999
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|||+.... . .|+|++|+.++.+.++++|++++
T Consensus 82 drV~~~~~------------------------------~------------------~G~~ae~~~v~~~~~~~~P~~~~ 113 (147)
T d1qora1 82 DRVVYAQS------------------------------A------------------LGAYSSVHNIIADKAAILPAAIK 113 (147)
T ss_dssp CEEEESCC------------------------------S------------------SCCSBSEEEEEGGGEEECCTTSC
T ss_pred ceeeeecc------------------------------c------------------cccceeEEEEehHHeEEcCcccc
Confidence 99963211 1 23899999999999999999998
Q ss_pred hhhhhh--hcccchhhhhhhhhhcCCCCCCEEEE
Q 022865 169 LDKVCL--LGCGVPTGLGAVWNTAKVEPGSIVAV 200 (291)
Q Consensus 169 ~~~aa~--l~~~~~ta~~~~~~~~~~~~g~~vlI 200 (291)
++++++ +++...++++++.+ .++++|++|||
T Consensus 114 ~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 114 VDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp CCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence 875554 45566667666644 67899999998
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=1.1e-26 Score=179.52 Aligned_cols=130 Identities=18% Similarity=0.211 Sum_probs=116.6
Q ss_pred eeEEEEecCCCCeEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCCCCCCCCC
Q 022865 10 CKAAVAWEPNKPLVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQPG 88 (291)
Q Consensus 10 ~~a~~~~~~~~~~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~~~~~~~G 88 (291)
|||+++.++|+++++++++.|.|+++|||||+++++||++|+..+.|.+... .+|+++|||++|+| +|
T Consensus 1 MkA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vG 69 (131)
T d1iz0a1 1 MKAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EG 69 (131)
T ss_dssp CEEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TT
T ss_pred CcEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------cc
Confidence 8999999999999999999999999999999999999999999999987554 78999999999999 39
Q ss_pred CEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCCCC
Q 022865 89 DHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQAP 168 (291)
Q Consensus 89 d~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~ 168 (291)
|+|+... .+ |+|+||+.++.+.++++|++++
T Consensus 70 d~V~~~~-------------------------------~~------------------G~~aey~~v~~~~~~~~P~~~~ 100 (131)
T d1iz0a1 70 RRYAALV-------------------------------PQ------------------GGLAERVAVPKGALLPLPEGRP 100 (131)
T ss_dssp EEEEEEC-------------------------------SS------------------CCSBSEEEEEGGGCEECCTTCC
T ss_pred ceEEEEe-------------------------------cc------------------CccceeeeeCHHHeEEccCCCC
Confidence 9997432 12 3999999999999999999999
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF 201 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~ 201 (291)
+++|+.+++.+.|||+++.+.. +.|++||++
T Consensus 101 ~~~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 101 VVGPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp CEEEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 9999999999999999987766 458888874
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=1.4e-26 Score=183.82 Aligned_cols=148 Identities=14% Similarity=0.169 Sum_probs=123.7
Q ss_pred cceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC-CCCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE-GLFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+|||+++..++++ +++++++.|+|++|||||||+++|||++|+..+.|.++. ..+|+++|+|++|+|++ +.+..
T Consensus 2 ~~~KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~ 79 (152)
T d1xa0a1 2 SAFQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPR 79 (152)
T ss_dssp CEEEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSS
T ss_pred CceEEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCc
Confidence 46899999998886 557899999999999999999999999999988887653 37899999999999999 45678
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
|++||+|+..... .+ ....|+|+||+.++.+.++++|
T Consensus 80 ~~~g~~v~~~~~~------------------------~~-------------------~~~~G~~aEy~~v~~~~~~~iP 116 (152)
T d1xa0a1 80 FREGDEVIATGYE------------------------IG-------------------VTHFGGYSEYARLHGEWLVPLP 116 (152)
T ss_dssp CCTTCEEEEESTT------------------------BT-------------------TTBCCSSBSEEEECGGGCEECC
T ss_pred cccCCEEEEecCc------------------------cc-------------------cccCCCcceeeeehhhccccCC
Confidence 9999999744320 00 1112499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEc
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFG 202 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G 202 (291)
+++|. +|++++++..|+|.++....+++ |++|||+|
T Consensus 117 ~~l~~-~aa~l~~a~~ta~~~~~~~~~~~-G~tVL~l~ 152 (152)
T d1xa0a1 117 KGLER-IAQEISLAELPQALKRILRGELR-GRTVVRLA 152 (152)
T ss_dssp TTHHH-HEEEEEGGGHHHHHHHHHHTCCC-SEEEEECC
T ss_pred CCCCH-HHHHHHHHHHHHHHHHHHhcCCC-CCEEEEcC
Confidence 99984 67888889899988888888875 99999975
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.91 E-value=6.1e-26 Score=184.03 Aligned_cols=156 Identities=21% Similarity=0.149 Sum_probs=127.9
Q ss_pred ccceeEEEEecCCCC---eEE--EeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCC----------CCCCcccccce
Q 022865 7 VITCKAAVAWEPNKP---LVI--EDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPE----------GLFPCILGHEA 71 (291)
Q Consensus 7 ~~~~~a~~~~~~~~~---~~~--~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~----------~~~p~~~G~e~ 71 (291)
+.++||+++.++|+| +++ .++|.|+|+++||||||++++||++|++.++|.++. ...|.++|+|+
T Consensus 1 m~t~kA~v~~~~G~p~~~l~l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~ 80 (175)
T d1gu7a1 1 MITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEG 80 (175)
T ss_dssp CEEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCC
T ss_pred CceeEEEEEccCCCcccccEEEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccccccc
Confidence 368999999999886 454 567777889999999999999999999999886532 25678999999
Q ss_pred eEEEEEeCCCCCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceee
Q 022865 72 AGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQ 151 (291)
Q Consensus 72 ~G~Vv~~G~~~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 151 (291)
+|+|++.|..+..++.||+|..... .. |+|+|
T Consensus 81 ~g~V~~~~~~~~~~~~g~~v~~~~~------------------------------~~------------------g~~ae 112 (175)
T d1gu7a1 81 LFEVIKVGSNVSSLEAGDWVIPSHV------------------------------NF------------------GTWRT 112 (175)
T ss_dssp EEEEEEECTTCCSCCTTCEEEESSS------------------------------CC------------------CCSBS
T ss_pred ccccccccccccccccccceecccc------------------------------cc------------------ccccc
Confidence 9999999999999999999974432 12 38999
Q ss_pred eEEecccceEEcCCCCChhhhhhhcccchhhhhhhhh-hcCCCCCCEEEEEc-C-ChHHHHHHH
Q 022865 152 YTVVHDVSVAKIDPQAPLDKVCLLGCGVPTGLGAVWN-TAKVEPGSIVAVFG-L-GTVGLAVAE 212 (291)
Q Consensus 152 ~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~~g~~vlI~G-~-g~vG~~ai~ 212 (291)
|+.++.++++++|++++.+. ++.+...|+|+++.. ...+++|++|||.| + |++|.+++|
T Consensus 113 y~~v~~~~~~~iP~~~~~~~--a~~~~~~ta~~~l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 113 HALGNDDDFIKLPNPAQSKA--NGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp EEEEEGGGEEEECCHHHHHH--TTCSCCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred eeeehhhhccCCCccchhhh--hccchHHHHHHHHHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence 99999999999999875443 345678889887654 46799999999997 4 679988776
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.9e-25 Score=179.07 Aligned_cols=150 Identities=16% Similarity=0.121 Sum_probs=124.7
Q ss_pred cceeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCCCCC
Q 022865 8 ITCKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTE 84 (291)
Q Consensus 8 ~~~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~~~~ 84 (291)
.+|||+++..+++. +++++++.|++.+|||||||+++|||++|+..+.+.++.. ..|.++|+|++|+|++ +.+++
T Consensus 2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~ 79 (162)
T d1tt7a1 2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR 79 (162)
T ss_dssp CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence 47999999987764 9999999999999999999999999999999998887644 6789999999999999 45678
Q ss_pred CCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcC
Q 022865 85 VQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKID 164 (291)
Q Consensus 85 ~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP 164 (291)
+++||+|+..... .| ....|+|+||+.++.++++++|
T Consensus 80 ~~~g~~v~~~~~~------------------------~g-------------------~~~~G~~aey~~v~~~~l~~iP 116 (162)
T d1tt7a1 80 FAEGDEVIATSYE------------------------LG-------------------VSRDGGLSEYASVPGDWLVPLP 116 (162)
T ss_dssp CCTTCEEEEESTT------------------------BT-------------------TTBCCSSBSSEEECGGGEEECC
T ss_pred cccceeeEeeecc------------------------ce-------------------eccccccceEEEecHHHEEECC
Confidence 9999999755331 11 1112499999999999999999
Q ss_pred CCCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC
Q 022865 165 PQAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL 203 (291)
Q Consensus 165 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~ 203 (291)
+++|+++|+.+++...|+|.++. ..+...+++|||.|+
T Consensus 117 ~~ls~~~Aa~~~~~~~ta~~~~~-~~~~~~~~~Vli~ga 154 (162)
T d1tt7a1 117 QNLSLKEAMVDQLLTIVDREVSL-EETPGALKDILQNRI 154 (162)
T ss_dssp TTCCHHHHHHSCSTTSEEEEECS-TTHHHHHHHTTTTCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECC
Confidence 99999999999999999998653 344555677887766
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.90 E-value=7.9e-24 Score=166.34 Aligned_cols=130 Identities=15% Similarity=0.159 Sum_probs=108.8
Q ss_pred eeEEEEecCCCC--eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCC-CCCcccccceeEEEEEeCCCCCCCC
Q 022865 10 CKAAVAWEPNKP--LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEG-LFPCILGHEAAGIVESVGEGVTEVQ 86 (291)
Q Consensus 10 ~~a~~~~~~~~~--~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~-~~p~~~G~e~~G~Vv~~G~~~~~~~ 86 (291)
|||+++..++++ +++++++.|+|++|||||||++++||++|+....|.++.. .+|.++|+|++|+|+++|. ..++
T Consensus 1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~ 78 (146)
T d1o89a1 1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH 78 (146)
T ss_dssp CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence 899999988876 7889999999999999999999999999999999986544 7899999999999999876 4699
Q ss_pred CCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceEEcCCC
Q 022865 87 PGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPQ 166 (291)
Q Consensus 87 ~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~ 166 (291)
+||+|+..... .| ....|+|+||+.++.+.++++|++
T Consensus 79 ~g~~v~~~~~~------------------------~g-------------------~~~~G~~Aey~~v~~~~vv~lP~~ 115 (146)
T d1o89a1 79 AGQEVLLTGWG------------------------VG-------------------ENHWGGLAEQARVKGDWLVAMPQG 115 (146)
T ss_dssp TTCEEEEECTT------------------------BT-------------------TTBCCSSBSEEEECGGGCEECCTT
T ss_pred ceeeEEeeccc------------------------ce-------------------ecCCCcceeeeeeeeeeEEECCCC
Confidence 99999754320 11 112349999999999999999999
Q ss_pred CChhhhhhhcccchhhhh
Q 022865 167 APLDKVCLLGCGVPTGLG 184 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~ 184 (291)
+|+++|+++++++.||+.
T Consensus 116 ls~~eAA~l~~a~~tA~~ 133 (146)
T d1o89a1 116 QAAKEISLSEAPNFAEAI 133 (146)
T ss_dssp SCCEEECGGGHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 999999999988777754
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.89 E-value=5.4e-23 Score=166.36 Aligned_cols=123 Identities=53% Similarity=0.957 Sum_probs=109.3
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+++.|+.+.|++.|+|+++.+..++++|++|+|+|+|++|++++|+++++|+++|++++.+++|+++++++|+++++++.
T Consensus 2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga~~~i~~~ 81 (174)
T d1e3ia2 2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPR 81 (174)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCCCcccCCc
Confidence 57889999999999999998899999999999999999999999999999998999999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
..+...........++|+|+||||+|++.+++.+++++++++|
T Consensus 82 ~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G 124 (174)
T d1e3ia2 82 ELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWG 124 (174)
T ss_dssp GCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTC
T ss_pred cchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCe
Confidence 5433444444455556999999999999999999999998634
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.89 E-value=1.9e-23 Score=169.14 Aligned_cols=120 Identities=33% Similarity=0.511 Sum_probs=112.1
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|+++|+.+++++.|+|+++ +..++++|++|+|+|+|++|++++|+||.+|+++|++++.+++|+++++++|+++++++
T Consensus 1 ip~e~A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa~~~i~~ 79 (174)
T d1jqba2 1 MPLENAVMITDMMTTGFHGA-ELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDILNY 79 (174)
T ss_dssp SCHHHHHTTTTHHHHHHHHH-HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTCSEEECG
T ss_pred CCHHHHHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHHHhhCccccccc
Confidence 57899999999999999986 67899999999999999999999999999999899999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++ +++.+.+.+++++ |+|+||||+|++.+++.++++++++|
T Consensus 80 ~~--~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G 121 (174)
T d1jqba2 80 KN--GHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGG 121 (174)
T ss_dssp GG--SCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred cc--hhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCC
Confidence 76 5678899999988 89999999999999999999999983
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.88 E-value=1.4e-22 Score=163.93 Aligned_cols=122 Identities=52% Similarity=0.856 Sum_probs=109.5
Q ss_pred hhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
|.+|+++.|++.|+|+++.+..++++|++|+|+|+|++|++++|+++++|+++|++++.+++|+++++++|+++++|+++
T Consensus 2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa~~~i~~~~ 81 (174)
T d1p0fa2 2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGATECLNPKD 81 (174)
T ss_dssp CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTCSEEECGGG
T ss_pred HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCCcEEEcCCC
Confidence 56789999999999999888999999999999999999999999999999989999999999999999999999999876
Q ss_pred CCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 249 HDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 249 ~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
.+....+.....+++++|++||++|++.++..++..+++++|
T Consensus 82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G 123 (174)
T d1p0fa2 82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSG 123 (174)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTC
T ss_pred chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcC
Confidence 444455556666666999999999999999999999987645
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.88 E-value=1.5e-22 Score=163.89 Aligned_cols=122 Identities=72% Similarity=1.199 Sum_probs=111.0
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
|+++||.+.|++.|+|+++.+..+++||++|||+|+|++|++++|+++++|+.+|++++++++|+++++++|+++++++.
T Consensus 2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa~~~i~~~ 81 (176)
T d2fzwa2 2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCCcEEEeCC
Confidence 67889999999999999998889999999999999999999999999999998999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+......+.+++.+++++|+|||++|++.+++.++.+++++|
T Consensus 82 ~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~ 123 (176)
T d2fzwa2 82 DFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGW 123 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTT
T ss_pred chhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCc
Confidence 655556666777776799999999999999999999988873
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.88 E-value=1.1e-22 Score=164.64 Aligned_cols=121 Identities=33% Similarity=0.617 Sum_probs=113.2
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|++.|+.++|++.|+|+++.+..++++|++|+|+|+|++|++++|+++++|+.+|++++.+++|+++++++|+++++++
T Consensus 1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga~~~i~~ 80 (174)
T d1f8fa2 1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINS 80 (174)
T ss_dssp SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTCSEEEET
T ss_pred CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCCeEEEeC
Confidence 36678999999999999999999999999999999999999999999999999888899999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++ +++.+.+++++++++|+||||+|++..++.++++++++|
T Consensus 81 ~~--~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G 121 (174)
T d1f8fa2 81 KT--QDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121 (174)
T ss_dssp TT--SCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEE
T ss_pred CC--cCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCce
Confidence 76 678899999998899999999999999999999999983
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=1.5e-22 Score=163.74 Aligned_cols=118 Identities=22% Similarity=0.259 Sum_probs=110.3
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+++|+ +|++++++++|+++++++|++++++
T Consensus 1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~-~vi~~~~~~~~~~~~~~~Ga~~vi~ 79 (174)
T d1yb5a2 1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVLQNGAHEVFN 79 (174)
T ss_dssp SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCc-ccccccccccccccccccCcccccc
Confidence 5889999999999999999988899999999999997 9999999999999999 8999989999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+++ .++.+.+++.+++ ++|+|||++|+ ..++.++++++++
T Consensus 80 ~~~--~~~~~~i~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~ 120 (174)
T d1yb5a2 80 HRE--VNYIDKIKKYVGEKGIDIIIEMLAN-VNLSKDLSLLSHG 120 (174)
T ss_dssp TTS--TTHHHHHHHHHCTTCEEEEEESCHH-HHHHHHHHHEEEE
T ss_pred ccc--ccHHHHhhhhhccCCceEEeecccH-HHHHHHHhccCCC
Confidence 876 6788999999887 89999999996 5699999999998
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.87 E-value=1.3e-22 Score=164.74 Aligned_cols=119 Identities=21% Similarity=0.291 Sum_probs=110.8
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+|+++||++++++.|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+++++++|++++++
T Consensus 1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga-~Vi~~~~s~~k~~~~~~lGa~~vi~ 79 (179)
T d1qora2 1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALKAGAWQVIN 79 (179)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCC-eEeecccchHHHHHHHhcCCeEEEE
Confidence 5889999999999999999988889999999999976 8899999999999999 9999999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++ +++.+.+++++++ ++|+|+|++|.+ .+..++++++++|
T Consensus 80 ~~~--~d~~~~v~~~t~g~g~d~v~d~~g~~-~~~~~~~~l~~~G 121 (179)
T d1qora2 80 YRE--EDLVERLKEITGGKKVRVVYDSVGRD-TWERSLDCLQRRG 121 (179)
T ss_dssp TTT--SCHHHHHHHHTTTCCEEEEEECSCGG-GHHHHHHTEEEEE
T ss_pred CCC--CCHHHHHHHHhCCCCeEEEEeCccHH-HHHHHHHHHhcCC
Confidence 887 6788999999988 999999999875 5999999999983
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.87 E-value=5e-22 Score=160.97 Aligned_cols=123 Identities=50% Similarity=0.854 Sum_probs=109.1
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
.|++.|+.+.|++.|+|+++.+..++++|++|+|+|+|++|++++|+++++|+.+|+++|.+++|+++++++|+++++++
T Consensus 2 ~P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA~~~in~ 81 (176)
T d1d1ta2 2 APPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGATECISP 81 (176)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTCSEEECG
T ss_pred cCHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCCcEEECc
Confidence 35889999999999999999899999999999999999999999999999998899999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 247 KDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
++.+ ...+.+.+.+.+ |+|++||++|.+..+..++..+.+++|
T Consensus 82 ~~~~-~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G 125 (176)
T d1d1ta2 82 KDST-KPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYG 125 (176)
T ss_dssp GGCS-SCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTC
T ss_pred cccc-hHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCe
Confidence 7633 334555555555 999999999999999999998877645
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.87 E-value=3.9e-22 Score=162.47 Aligned_cols=122 Identities=24% Similarity=0.359 Sum_probs=110.1
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
|++.++.+.|+..|+|+++.+..++++|++|||+|+|++|++++|+|+++|+++|++++++++|+++++++|+++++++.
T Consensus 2 d~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi~~~ 81 (182)
T d1vj0a2 2 DLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLTLNRR 81 (182)
T ss_dssp CHHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTCSEEEETT
T ss_pred cHHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheecccccccccccccccccccccccccccceEEEecc
Confidence 45678888999999999998888999999999999999999999999999998899999999999999999999999887
Q ss_pred CCC-chHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 248 DHD-KPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 248 ~~~-~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+ .++.+.+.+++++ ++|+||||+|++.+++.++++++++|
T Consensus 82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G 125 (182)
T d1vj0a2 82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGG 125 (182)
T ss_dssp TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEE
T ss_pred ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCC
Confidence 643 2456668888877 99999999999999999999999983
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.86 E-value=2e-21 Score=157.36 Aligned_cols=123 Identities=57% Similarity=1.020 Sum_probs=110.2
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
|+++||+++|++.|+|+++.+..++++|++|||+|+|++|++++++++.+|+.+|++++++++|+++++++|+++++++.
T Consensus 2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga~~~i~~~ 81 (176)
T d2jhfa2 2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQ 81 (176)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCSEEECGG
T ss_pred CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCCeeEEecC
Confidence 67889999999999999999999999999999999999999999999999988999999999999999999999999876
Q ss_pred CCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccCC
Q 022865 248 DHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVSG 290 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~gg 290 (291)
+.++...+.+....++++|++||++|.+.+++.++++++++||
T Consensus 82 ~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g 124 (176)
T d2jhfa2 82 DYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYG 124 (176)
T ss_dssp GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTC
T ss_pred CchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCc
Confidence 6444455555555556999999999999999999999988743
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.85 E-value=1.3e-21 Score=159.20 Aligned_cols=115 Identities=21% Similarity=0.342 Sum_probs=107.0
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKD 248 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~ 248 (291)
++||+++++++|||+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +++++.++++++++++++|+++++++++
T Consensus 1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~-~vi~~~~~~~~~~~l~~~Ga~~vi~~~~ 79 (183)
T d1pqwa_ 1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA-RIYTTAGSDAKREMLSRLGVEYVGDSRS 79 (183)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHTTCCSEEEETTC
T ss_pred CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccc-cceeeecccccccccccccccccccCCc
Confidence 4789999999999999999999999999999986 9999999999999999 8888889999999999999999999876
Q ss_pred CCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 249 HDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 249 ~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.++.+.+++.+++ ++|++||++|+ ..++.++++|+++
T Consensus 80 --~~~~~~v~~~t~~~g~d~v~d~~g~-~~~~~~~~~l~~~ 117 (183)
T d1pqwa_ 80 --VDFADEILELTDGYGVDVVLNSLAG-EAIQRGVQILAPG 117 (183)
T ss_dssp --STHHHHHHHHTTTCCEEEEEECCCT-HHHHHHHHTEEEE
T ss_pred --cCHHHHHHHHhCCCCEEEEEecccc-hHHHHHHHHhcCC
Confidence 6888999999987 99999999998 4699999999998
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.84 E-value=7.7e-21 Score=153.60 Aligned_cols=121 Identities=60% Similarity=1.044 Sum_probs=107.4
Q ss_pred ChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 168 PLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 168 ~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
|+++|+++.|++.|+|+++.+..++++|++|+|+|+|++|++++++++.+|+.+|++++++++|+++++++|+++++++.
T Consensus 2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GAd~~in~~ 81 (175)
T d1cdoa2 2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPN 81 (175)
T ss_dssp CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTCCEEECGG
T ss_pred CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHHHHcCCcEEEcCC
Confidence 67889999999999999998889999999999999999999999999999998999999999999999999999999987
Q ss_pred CCCchHHHHHHhhc-CCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 248 DHDKPIQQVLVDLT-DGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 248 ~~~~~~~~~v~~~~-~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+ +..+.+.+.+ ++++|++||++|+..++..++++++++|
T Consensus 82 ~~~-~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~ 123 (175)
T d1cdoa2 82 DHS-EPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGW 123 (175)
T ss_dssp GCS-SCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTT
T ss_pred Ccc-hhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCC
Confidence 633 3334455544 4599999999999999999999988874
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=3.1e-20 Score=149.50 Aligned_cols=121 Identities=21% Similarity=0.335 Sum_probs=103.0
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|+++|+++. +++++|+++ ++.+++++++|+|+|+|++|++++|+++++|+.+|++++.+++|+++++++|++++++.
T Consensus 1 vS~e~Aal~e-pla~a~~a~-~~~~~~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga~~~~~~ 78 (171)
T d1pl8a2 1 VTFEEGALIE-PLSVGIHAC-RRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGADLVLQI 78 (171)
T ss_dssp SCHHHHHHHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCCcccccc
Confidence 4678888764 788999976 67899999999999999999999999999999889999999999999999999999988
Q ss_pred CCCCch-HHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKP-IQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~-~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+.+.. ..+.+....+.++|+||||+|++..++.++++++++|
T Consensus 79 ~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG 122 (171)
T d1pl8a2 79 SKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGG 122 (171)
T ss_dssp SSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTC
T ss_pred cccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCC
Confidence 764332 2233333334499999999999999999999999983
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.82 E-value=1.7e-20 Score=150.84 Aligned_cols=120 Identities=22% Similarity=0.287 Sum_probs=110.1
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+|+.+||.++|++.|||+++ ++.+++++++|+|+|+ |++|++++|+++++|+.+|++++.+++|+++++++|++++++
T Consensus 1 l~~~eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga~~~i~ 79 (170)
T d1jvba2 1 LNAVEAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGADYVIN 79 (170)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCCceeec
Confidence 57899999999999999986 6688999999999996 999999999999999889999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++ .++.+.+.+.+++ ++|++|||+|++..++.++++++++|
T Consensus 80 ~~~--~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G 122 (170)
T d1jvba2 80 ASM--QDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQG 122 (170)
T ss_dssp TTT--SCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEE
T ss_pred cCC--cCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCC
Confidence 876 5677788888876 89999999999999999999999983
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.82 E-value=8.1e-21 Score=153.39 Aligned_cols=118 Identities=15% Similarity=0.116 Sum_probs=98.3
Q ss_pred CChhhhhhhcccchhhhhhh---hhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAV---WNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~---~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+|+++||++++++.|||+++ .+..+.++|++|||+|+ |++|.+++|+||.+|+ +|+++.++++|.++++++|+++
T Consensus 1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga-~Viat~~s~~k~~~~~~lGa~~ 79 (176)
T d1xa0a2 1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRVLGAKE 79 (176)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHHTTCSE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCC-ceEEecCchHHHHHHHhcccce
Confidence 58899999999999999664 45677889999999987 9999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++++ .+.+.+....++++|+|||++|++ .+..++++|+++|
T Consensus 80 vi~~~~---~~~~~~~~~~~~gvD~vid~vgg~-~~~~~l~~l~~~G 122 (176)
T d1xa0a2 80 VLARED---VMAERIRPLDKQRWAAAVDPVGGR-TLATVLSRMRYGG 122 (176)
T ss_dssp EEECC------------CCSCCEEEEEECSTTT-THHHHHHTEEEEE
T ss_pred eeecch---hHHHHHHHhhccCcCEEEEcCCch-hHHHHHHHhCCCc
Confidence 998764 233444444455999999999986 4999999999983
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.81 E-value=3e-20 Score=149.77 Aligned_cols=117 Identities=23% Similarity=0.362 Sum_probs=105.2
Q ss_pred hhhhhhhcccchhhhhhhhhhc-CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 169 LDKVCLLGCGVPTGLGAVWNTA-KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 169 ~~~aa~l~~~~~ta~~~~~~~~-~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
+.++|.+++++.|+|+++.+.. .+++|++|+|+|+|++|++++|+++++|+.+|++++++++|+++++++|++++++++
T Consensus 6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga~~~i~~~ 85 (172)
T d1h2ba2 6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGADHVVDAR 85 (172)
T ss_dssp HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTCSEEEETT
T ss_pred HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHHhhcccceeecCc
Confidence 5788999999999999987765 489999999999999999999999999998999999999999999999999999987
Q ss_pred CCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 248 DHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 248 ~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+ +..+.+.+.+++ ++|+||||+|+...++.++++++++
T Consensus 86 ~---~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~ 124 (172)
T d1h2ba2 86 R---DPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRM 124 (172)
T ss_dssp S---CHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEE
T ss_pred c---cHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCC
Confidence 5 344556667766 9999999999998999999999998
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.81 E-value=7.9e-21 Score=153.13 Aligned_cols=112 Identities=21% Similarity=0.257 Sum_probs=98.3
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
+++++||.+++++.|||+++. ..++++|++|||+|+ |++|++++|+||++|+ +|++++++++|+++++++|++++++
T Consensus 1 ls~eeAA~l~~~~~TA~~al~-~~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~-~vi~~~~~~~~~~~~~~lGa~~~i~ 78 (171)
T d1iz0a2 1 LSPEEAAAFPVSFLTAYLALK-RAQARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLALGAEEAAT 78 (171)
T ss_dssp CCHHHHHTSHHHHHHHHHHHH-HTTCCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEEeccccchhhhhhhhccccc-ccccccccccccccccccccceeee
Confidence 578999999999999999874 589999999999987 9999999999999999 8999999999999999999999998
Q ss_pred CCCCCchHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHDKPIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+ . ..+.+.+ ++|+|||++|. .+..++++++++|
T Consensus 79 ~~~----~---~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~G 114 (171)
T d1iz0a2 79 YAE----V---PERAKAWGGLDLVLEVRGK--EVEESLGLLAHGG 114 (171)
T ss_dssp GGG----H---HHHHHHTTSEEEEEECSCT--THHHHHTTEEEEE
T ss_pred hhh----h---hhhhhccccccccccccch--hHHHHHHHHhcCC
Confidence 753 2 2334444 89999999884 4899999999983
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.81 E-value=1.1e-19 Score=145.88 Aligned_cols=120 Identities=24% Similarity=0.348 Sum_probs=102.6
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|+++|+++. +++++|+++ ++.+++++++|+|+|+|++|++++|+|+++|+ +|++++++++|+++++++|++..+..
T Consensus 1 VS~e~Aal~e-Pla~a~~a~-~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~Ga-~vi~v~~~~~r~~~a~~~ga~~~~~~ 77 (170)
T d1e3ja2 1 VSLEEGALLE-PLSVGVHAC-RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKNCGADVTLVV 77 (170)
T ss_dssp SCHHHHHTHH-HHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHH-HHHHHHHHH-HHhCCCCCCEEEEEcccccchhhHhhHhhhcc-cccccchHHHHHHHHHHcCCcEEEec
Confidence 4788888774 788999976 67889999999999999999999999999999 99999999999999999999987765
Q ss_pred CCCCc---hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDK---PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~---~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.... +..+.+.+..++++|+||||+|++.+++.++++++++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G 123 (170)
T d1e3ja2 78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGG 123 (170)
T ss_dssp CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTC
T ss_pred cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCC
Confidence 54323 34455555555699999999999999999999999993
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.81 E-value=3.5e-20 Score=150.72 Aligned_cols=113 Identities=22% Similarity=0.257 Sum_probs=101.2
Q ss_pred hhhcccchhhhhhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCc
Q 022865 173 CLLGCGVPTGLGAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK 251 (291)
Q Consensus 173 a~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~ 251 (291)
+++.++++|||+++.+..++++|++|||+|+ |++|++++|+||.+|+ +||++++++++.++++++|+++++++++ +
T Consensus 8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga-~vi~~~~~~~~~~~~~~~Ga~~vi~~~~--~ 84 (182)
T d1v3va2 8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYLKQIGFDAAFNYKT--V 84 (182)
T ss_dssp TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTTCSEEEETTS--C
T ss_pred HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCC-EEEEeCCCHHHHHHHHhhhhhhhccccc--c
Confidence 4667889999999999999999999999987 9999999999999999 9999999999999999999999999876 5
Q ss_pred hHHHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhccC
Q 022865 252 PIQQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 252 ~~~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++.+.+.+.+.+ ++|+|||++|. ..++.++++++++|
T Consensus 85 ~~~~~~~~~~~~~Gvd~v~D~vG~-~~~~~~~~~l~~~G 122 (182)
T d1v3va2 85 NSLEEALKKASPDGYDCYFDNVGG-EFLNTVLSQMKDFG 122 (182)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCH-HHHHHHGGGEEEEE
T ss_pred cHHHHHHHHhhcCCCceeEEecCc-hhhhhhhhhccCCC
Confidence 566666666655 99999999996 56999999999983
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.81 E-value=7.7e-20 Score=146.39 Aligned_cols=117 Identities=21% Similarity=0.310 Sum_probs=104.8
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|++++|.++|++.|+|+++ +..++++|++|+|+|+|++|++++|++|++|+ +|++++++++|+++++++|+++++++
T Consensus 1 v~f~~aA~l~ca~~Ta~~al-~~~~~~~g~~VlV~GaG~vG~~~~~~ak~~G~-~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 78 (166)
T d1llua2 1 VEFAEIAPILCAGVTVYKGL-KQTNARPGQWVAISGIGGLGHVAVQYARAMGL-HVAAIDIDDAKLELARKLGASLTVNA 78 (166)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTCSEEEET
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeeccccHHHHHHHHHHcCC-ccceecchhhHHHhhhccCccccccc
Confidence 57899999999999999987 56899999999999999999999999999998 99999999999999999999999988
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+ .++.+.+.+.+. ++|.++++++....++.++++++++
T Consensus 79 ~~--~~~~~~~~~~~~-g~~~~i~~~~~~~~~~~~~~~l~~~ 117 (166)
T d1llua2 79 RQ--EDPVEAIQRDIG-GAHGVLVTAVSNSAFGQAIGMARRG 117 (166)
T ss_dssp TT--SCHHHHHHHHHS-SEEEEEECCSCHHHHHHHHTTEEEE
T ss_pred cc--hhHHHHHHHhhc-CCcccccccccchHHHHHHHHhcCC
Confidence 76 556677777655 5777777888888999999999998
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.80 E-value=1.5e-19 Score=148.47 Aligned_cols=117 Identities=31% Similarity=0.421 Sum_probs=106.7
Q ss_pred hhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC
Q 022865 170 DKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH 249 (291)
Q Consensus 170 ~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~ 249 (291)
++.+.+..+++|+|+++ +.+++++|++|||+|+|++|++++++++++|+.+|++++.+++|+++++++|++.++++.+
T Consensus 2 ~d~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga~~~~~~~~- 79 (195)
T d1kola2 2 RDLTCLSDILPTGYHGA-VTAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGFEIADLSLD- 79 (195)
T ss_dssp HHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTCEEEETTSS-
T ss_pred chHHhcccHHHHHHHHH-HHhCCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhhhhccccEEEeCCC-
Confidence 46677888999999986 6799999999999999999999999999999989999999999999999999999998876
Q ss_pred CchHHHHHHhhcCC-CccEEEEcCCC---------------hHHHHHHHHHhhccC
Q 022865 250 DKPIQQVLVDLTDG-GVDYSFECIGN---------------VSVMRAALECCHKVS 289 (291)
Q Consensus 250 ~~~~~~~v~~~~~g-g~d~v~d~~g~---------------~~~~~~~~~~l~~~g 289 (291)
.++.+.+.+++++ ++|++||++|. ..+++.++++++++|
T Consensus 80 -~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG 134 (195)
T d1kola2 80 -TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAG 134 (195)
T ss_dssp -SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEE
T ss_pred -cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCC
Confidence 6788889999988 99999999993 468999999999983
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=1.5e-19 Score=144.98 Aligned_cols=116 Identities=22% Similarity=0.283 Sum_probs=99.9
Q ss_pred CCChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeC
Q 022865 166 QAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVN 245 (291)
Q Consensus 166 ~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~ 245 (291)
..+++.+|.+.|+..|+|+++ +..++++|++|+|+|+|++|++++|+||++|+ ++++++.+++++++++++|++++++
T Consensus 3 ~~~~a~~Apl~Cag~Tay~al-~~~~~~~G~~VlI~GaG~vG~~a~qlak~~Ga-~~i~~~~~~~~~~~a~~lGad~~i~ 80 (168)
T d1uufa2 3 QEQLAAVAPLLCAGITTYSPL-RHWQAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKALGADEVVN 80 (168)
T ss_dssp GGGHHHHGGGGTHHHHHHHHH-HHTTCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHTCSEEEE
T ss_pred cccHHHHHHHHhHHHHHHHHH-HHhCCCCCCEEEEeccchHHHHHHHHhhcccc-cchhhccchhHHHHHhccCCcEEEE
Confidence 345677888899999999987 67899999999999999999999999999999 7778999999999999999999999
Q ss_pred CCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 246 PKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 246 ~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+ ... .....+++|++||++|++..++.++++++++|
T Consensus 81 ~~~--~~~----~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G 118 (168)
T d1uufa2 81 SRN--ADE----MAAHLKSFDFILNTVAAPHNLDDFTTLLKRDG 118 (168)
T ss_dssp TTC--HHH----HHTTTTCEEEEEECCSSCCCHHHHHTTEEEEE
T ss_pred Cch--hhH----HHHhcCCCceeeeeeecchhHHHHHHHHhcCC
Confidence 875 221 11122389999999999888999999999983
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.77 E-value=1.3e-18 Score=139.09 Aligned_cols=118 Identities=23% Similarity=0.386 Sum_probs=104.9
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|+++||++++++.|+|+++ +..+++++++|||+|+|++|++++++++..|+ +|++++++++|+++++++|++.++++
T Consensus 1 ls~eeAA~l~~~~~Ta~~al-~~~~~~~g~~vlv~G~G~iG~~a~~~a~~~g~-~v~~~~~~~~r~~~~k~~Ga~~~~~~ 78 (168)
T d1rjwa2 1 LSFEEAAPIFCAGVTTYKAL-KVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKELGADLVVNP 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHHTCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCSEEECT
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEeecccchhhhhHHHhcCCC-eEeccCCCHHHhhhhhhcCcceeccc
Confidence 58999999999999999986 56889999999999999999999999999999 89999999999999999999999998
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+ .++.+.+.+.+.+ .|.+++++++...+..++++++++|
T Consensus 79 ~~--~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~a~~~l~~~G 118 (168)
T d1rjwa2 79 LK--EDAAKFMKEKVGG-VHAAVVTAVSKPAFQSAYNSIRRGG 118 (168)
T ss_dssp TT--SCHHHHHHHHHSS-EEEEEESSCCHHHHHHHHHHEEEEE
T ss_pred cc--chhhhhcccccCC-CceEEeecCCHHHHHHHHHHhccCC
Confidence 77 5677778888775 4555566777888999999999983
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.76 E-value=5.3e-19 Score=144.28 Aligned_cols=119 Identities=24% Similarity=0.285 Sum_probs=100.7
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCC--CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-HHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPG--SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-FDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g--~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-~~~~~~~ga~~ 242 (291)
+|+...+ ++++..|||+++....++++| ++|||+|+ |++|++++|+||.+|+++|++++.++++ .++++++|++.
T Consensus 2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~ 80 (187)
T d1vj1a2 2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA 80 (187)
T ss_dssp GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence 4555543 567899999999999999987 88999986 9999999999999999778877666655 45666899999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++|+++ +++.+.+++.++.|+|+|||++|.+ .++.++++++++|
T Consensus 81 vi~~~~--~~~~~~~~~~~~~GvDvv~D~vGg~-~~~~~~~~l~~~G 124 (187)
T d1vj1a2 81 AVNYKT--GNVAEQLREACPGGVDVYFDNVGGD-ISNTVISQMNENS 124 (187)
T ss_dssp EEETTS--SCHHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEE
T ss_pred Eeeccc--hhHHHHHHHHhccCceEEEecCCch-hHHHHhhhccccc
Confidence 999987 6788889888877999999999974 5999999999983
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=3e-19 Score=143.25 Aligned_cols=115 Identities=19% Similarity=0.219 Sum_probs=97.2
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
+|++.||.+.|+..|+|+++ +..++++|++|+|+|+|++|++++|+||++|+ +|++++.+++|+++++++|+++++++
T Consensus 1 lp~e~AApl~cag~Ta~~al-~~~~~~~g~~vlI~GaG~vG~~a~q~ak~~G~-~vi~~~~~~~k~~~a~~lGa~~~i~~ 78 (168)
T d1piwa2 1 IPSHLAAPLLCGGLTVYSPL-VRNGCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMKMGADHYIAT 78 (168)
T ss_dssp SCHHHHGGGGTHHHHHHHHH-HHTTCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHHHTCSEEEEG
T ss_pred CCHHHHHHHHHHHHHHHHHH-HHhCcCCCCEEEEECCCCcchhHHHHhhhccc-cccccccchhHHHHhhccCCcEEeec
Confidence 35577889999999999987 46789999999999999999999999999999 89999999999999999999999987
Q ss_pred CCCCchHHHHHHhhcCCCccEEEEcCCChH--HHHHHHHHhhcc
Q 022865 247 KDHDKPIQQVLVDLTDGGVDYSFECIGNVS--VMRAALECCHKV 288 (291)
Q Consensus 247 ~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~--~~~~~~~~l~~~ 288 (291)
.++ .++ . +...+++|.++||++... .+..++++++++
T Consensus 79 ~~~-~~~---~-~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~ 117 (168)
T d1piwa2 79 LEE-GDW---G-EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVG 117 (168)
T ss_dssp GGT-SCH---H-HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEE
T ss_pred cch-HHH---H-HhhhcccceEEEEecCCccchHHHHHHHhhcc
Confidence 653 222 2 222347999999988643 477889999998
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.75 E-value=6.6e-19 Score=143.96 Aligned_cols=121 Identities=14% Similarity=0.195 Sum_probs=99.8
Q ss_pred CChhhhhhhcccchhhhhhhhhhcCCCCCCEEEEE-cC-ChHHHHHHHHHHHcCCCeEEEEcCCh----hhHHHHHhcCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVF-GL-GTVGLAVAEGAKAAGASRVIGIDIDP----KKFDRAKNFGV 240 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~-G~-g~vG~~ai~~a~~~g~~~v~~~~~~~----~~~~~~~~~ga 240 (291)
+|+++||+++++++|||+++.+..++++|++++|+ |+ |++|++++|+||++|+ +||++.+++ ++.++++++|+
T Consensus 1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga-~vI~~v~~~~~~~~~~~~~~~lGa 79 (189)
T d1gu7a2 1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRPNLDEVVASLKELGA 79 (189)
T ss_dssp CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCTTHHHHHHHHHHHTC
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCC-eEEEEEecccccchHHhhhhhccc
Confidence 58899999999999999999899999999999887 55 9999999999999999 777765443 45667789999
Q ss_pred CEEeCCCC-CCchHHHHHHhhc---CCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 241 TEFVNPKD-HDKPIQQVLVDLT---DGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 241 ~~~i~~~~-~~~~~~~~v~~~~---~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+++++++. +..++.+.+.+.+ ++++|+|||++|.+. +..++++|+++|
T Consensus 80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~G 131 (189)
T d1gu7a2 80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNG 131 (189)
T ss_dssp SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTC
T ss_pred cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCCc
Confidence 99998754 2245555566543 448999999999755 889999999983
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.67 E-value=2.1e-17 Score=133.34 Aligned_cols=116 Identities=15% Similarity=0.158 Sum_probs=95.6
Q ss_pred CChhhhhhhcccchhhhhhhh---hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 167 APLDKVCLLGCGVPTGLGAVW---NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~---~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+|+.+|+.++++..|||+++. +.....++++|||+|+ |++|.+++|+||.+|+ +||++.++++|.+.++++|+++
T Consensus 1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga-~Via~~~~~~k~~~~~~lGad~ 79 (177)
T d1o89a2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGASR 79 (177)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTEEE
T ss_pred CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCC-CeEEEecchhHHHHHHhhcccc
Confidence 578999999999999997753 3334455679999977 9999999999999999 8999999999999999999999
Q ss_pred EeCCCCCCchHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 243 FVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 243 ~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
++++++. ++ .+.+....+|.++|++|++ .+...+++++++|
T Consensus 80 vi~~~~~--~~---~~~l~~~~~~~vvD~Vgg~-~~~~~l~~l~~~G 120 (177)
T d1o89a2 80 VLPRDEF--AE---SRPLEKQVWAGAIDTVGDK-VLAKVLAQMNYGG 120 (177)
T ss_dssp EEEGGGS--SS---CCSSCCCCEEEEEESSCHH-HHHHHHHTEEEEE
T ss_pred ccccccH--HH---HHHHHhhcCCeeEEEcchH-HHHHHHHHhcccc
Confidence 9998752 22 1223334689999999985 4999999999983
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.63 E-value=4.3e-17 Score=130.18 Aligned_cols=106 Identities=17% Similarity=0.124 Sum_probs=84.9
Q ss_pred chhhh---hhhhhhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHH
Q 022865 179 VPTGL---GAVWNTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQ 254 (291)
Q Consensus 179 ~~ta~---~~~~~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~ 254 (291)
..||| +++.+....+++++|||+|+ |++|.+++|+||++|+ +|+++.++++|.++++++|++.++++++ ...
T Consensus 5 GlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~~~~lGad~vi~~~~---~~~ 80 (167)
T d1tt7a2 5 GFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQLGASEVISRED---VYD 80 (167)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHHHTCSEEEEHHH---HCS
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCC-ceEEEecCHHHHHHHHhhcccceEeccc---hhc
Confidence 44555 44555666778889999987 9999999999999999 8999999999999999999999987643 111
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
+.+....++++|+|||++|.+. +..++++|+++|
T Consensus 81 ~~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~G 114 (167)
T d1tt7a2 81 GTLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYGG 114 (167)
T ss_dssp SCCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEEE
T ss_pred hhhhcccCCCceEEEecCcHHH-HHHHHHHhccCc
Confidence 2223333449999999999865 899999999983
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.59 E-value=1.3e-14 Score=112.83 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=98.3
Q ss_pred cceeEEEEecC--CCC----eEEEeeecCCCCCCeEEEEEeeeecchhhhhhhcCCCCCCCCCcccccceeEEEEEeCCC
Q 022865 8 ITCKAAVAWEP--NKP----LVIEDVQVAPPQAGEVRIKILFTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEG 81 (291)
Q Consensus 8 ~~~~a~~~~~~--~~~----~~~~~~~~~~~~~~evlVkv~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~Vv~~G~~ 81 (291)
++.|++++... |.+ |++++.+.|.|++||||||+++.++++........ . +....+..+.+|+|++ |+
T Consensus 2 ~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~-~---~~g~~~~g~~vg~Vv~--S~ 75 (147)
T d1v3va1 2 VKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR-L---KEGAVMMGQQVARVVE--SK 75 (147)
T ss_dssp CEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG-S---CTTSBCCCCEEEEEEE--ES
T ss_pred cccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc-c---ccCCccccceEEEEEE--eC
Confidence 46788888875 333 99999999999999999999999999876543322 1 1223456689999998 67
Q ss_pred CCCCCCCCEEeecCCCCCCCChhhhCCCCCCCCCccCCCCCceecCCCccccccCCCceecccCCcceeeeEEecccceE
Q 022865 82 VTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRGATGAGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVA 161 (291)
Q Consensus 82 ~~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~~~~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 161 (291)
.++|++||+|... ++|++|.+.+.+.+.
T Consensus 76 ~~~f~~GD~V~g~----------------------------------------------------~gw~ey~v~~~~~l~ 103 (147)
T d1v3va1 76 NSAFPAGSIVLAQ----------------------------------------------------SGWTTHFISDGKGLE 103 (147)
T ss_dssp CTTSCTTCEEEEC----------------------------------------------------CCSBSEEEECSSSCE
T ss_pred CCcccCCCEEEEc----------------------------------------------------cCCEeEEEeccceee
Confidence 7889999999722 179999999999999
Q ss_pred EcCCCCChh-----hhhhhcccchhh-hhhhhhhcCCCCCCEEEE
Q 022865 162 KIDPQAPLD-----KVCLLGCGVPTG-LGAVWNTAKVEPGSIVAV 200 (291)
Q Consensus 162 ~iP~~~~~~-----~aa~l~~~~~ta-~~~~~~~~~~~~g~~vlI 200 (291)
++|+..+.. ..+++....+|+ |..+. ...+.|++||+
T Consensus 104 kv~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~ 146 (147)
T d1v3va1 104 KLLTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT 146 (147)
T ss_dssp ECCTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred EccccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence 998765433 234455566664 44443 34567999986
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=1.2e-13 Score=94.86 Aligned_cols=73 Identities=18% Similarity=0.213 Sum_probs=65.4
Q ss_pred CChhhhhhhcccchhhhhhhh---hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 167 APLDKVCLLGCGVPTGLGAVW---NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 167 ~~~~~aa~l~~~~~ta~~~~~---~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|+++|+.++++..|||.+++ +....+++++|||+|+ |++|.+++|++|.+|+ +|+++.++++|.++++++||
T Consensus 1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~-~Vi~~t~s~~k~~~~~~lGA 77 (77)
T d1o8ca2 1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGY-QVVAVSGRESTHEYLKSLGA 77 (77)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHHHTE
T ss_pred CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHHCCC
Confidence 578999999999999988754 4456789999999987 9999999999999999 89999999999999999985
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=97.93 E-value=8.1e-06 Score=63.09 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=53.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+..+|+|+|+|..|+.|+..|+.+|+ .|.++|.+.++++.++...... .....+ ...+.+.+. .+|+||.++
T Consensus 31 ~pa~V~ViGaGvaG~~A~~~A~~lGA-~V~~~D~~~~~l~~l~~~~~~~~~~~~~~-~~~l~~~~~-----~aDivI~aa 103 (168)
T d1pjca1 31 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLETLFGSRVELLYSN-SAEIETAVA-----EADLLIGAV 103 (168)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGSEEEECC-HHHHHHHHH-----TCSEEEECC
T ss_pred CCcEEEEECCChHHHHHHHHHhhCCC-EEEEEeCcHHHHHHHHHhhcccceeehhh-hhhHHHhhc-----cCcEEEEee
Confidence 45789999999999999999999999 9999999999999887653322 111111 123333333 489999875
Q ss_pred C
Q 022865 273 G 273 (291)
Q Consensus 273 g 273 (291)
=
T Consensus 104 l 104 (168)
T d1pjca1 104 L 104 (168)
T ss_dssp C
T ss_pred e
Confidence 4
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=97.79 E-value=3.9e-05 Score=63.48 Aligned_cols=80 Identities=23% Similarity=0.222 Sum_probs=59.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC--CCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD--GGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~--gg~d~v~d 270 (291)
+|+++||+|+ +++|++.++.+...|+ +|+..++++++++.+++.+...+-..-.+..+..+.+.+... |++|++++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 4 AGKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPEGKEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTHHHHHHHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 6899999987 9999999999999999 999999999999988888765432211222333333433322 47999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
++|.
T Consensus 83 nAG~ 86 (248)
T d2d1ya1 83 NAAI 86 (248)
T ss_dssp CCCC
T ss_pred eCcC
Confidence 9884
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.75 E-value=7.3e-05 Score=57.92 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=45.2
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV 240 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga 240 (291)
+.+...+.++++|+|+|+|+.+.+++..++..|+++|+.+.++.+|.+.+. .++.
T Consensus 8 ~l~~~~~~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~ 63 (167)
T d1npya1 8 LIEKYHLNKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY 63 (167)
T ss_dssp HHHHTTCCTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC
T ss_pred HHHHcCCCCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh
Confidence 345566667889999999999999999999999989999999998866554 4554
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.72 E-value=0.00012 Score=56.12 Aligned_cols=73 Identities=21% Similarity=0.220 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
-.+.+|||+|+|.+|.+.++.+...|+++++++.++.+|. +++++++. .++.+. ++.+.+. .+|+||.|
T Consensus 22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~----~~~~~l~-----~~Divi~a 91 (159)
T d1gpja2 22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD----ELVDHLA-----RSDVVVSA 91 (159)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG----GHHHHHH-----TCSEEEEC
T ss_pred cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch----hHHHHhc-----cCCEEEEe
Confidence 4678999999999999999999999998899999997775 46678875 344332 3333333 49999999
Q ss_pred CCCh
Q 022865 272 IGNV 275 (291)
Q Consensus 272 ~g~~ 275 (291)
++.+
T Consensus 92 tss~ 95 (159)
T d1gpja2 92 TAAP 95 (159)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 9864
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=97.69 E-value=9.8e-05 Score=57.65 Aligned_cols=48 Identities=31% Similarity=0.485 Sum_probs=43.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE 242 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~ 242 (291)
+..+|+|+|+|.+|+.|+..|+.+|+ +|.++|.+.++++.+++++...
T Consensus 28 ~pa~VvViGaGvaG~~Aa~~A~~lGA-~V~v~D~~~~~~~~l~~l~~~~ 75 (183)
T d1l7da1 28 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVESLGGKF 75 (183)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHHTTCEE
T ss_pred CCcEEEEEcCcHHHHHHHHHHHHcCC-EEEEEeccHHHHHHHHHhhcce
Confidence 34689999999999999999999999 9999999999999999988743
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.58 E-value=0.00013 Score=59.84 Aligned_cols=80 Identities=20% Similarity=0.236 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEEeCCCCCCchHHHHHHhhc--CCCccEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSF 269 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~v~~~~--~gg~d~v~ 269 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++++..+...-.+.+++.+.+.+.. .+++|+++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 82 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGA-RLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEE
Confidence 5789999987 9999999999999999 8999999998877664 4555333221122233333333322 24799999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
+++|.
T Consensus 83 nnAG~ 87 (242)
T d1ulsa_ 83 HYAGI 87 (242)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99884
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.54 E-value=0.00034 Score=57.41 Aligned_cols=79 Identities=22% Similarity=0.207 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++....+..+-.+.+..+.+.+.. +++|+++++
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-g~iDilVnn 83 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGA-RVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSV-GPVDLLVNN 83 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC-CCCCEEEEC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHh-CCceEEEec
Confidence 6899999987 9999999999989999 999999999987655 45554343322222222222222222 479999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
.|.
T Consensus 84 Ag~ 86 (244)
T d1pr9a_ 84 AAV 86 (244)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.47 E-value=0.00047 Score=56.41 Aligned_cols=78 Identities=21% Similarity=0.180 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCc-hHHHHHHhhcCCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDK-PIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~-~~~~~v~~~~~gg~d~v~d 270 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ +++..-..+..+-.+. .+.+.+.++ |++|++++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~--g~iDilVn 80 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGA-KVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGI--GPVDLLVN 80 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTC--CCCSEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHc--CCCeEEEE
Confidence 5899999987 9999999999989999 999999998887555 4554333332222122 333333222 47999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
++|.
T Consensus 81 nAg~ 84 (242)
T d1cyda_ 81 NAAL 84 (242)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9883
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.43 E-value=0.00022 Score=58.65 Aligned_cols=79 Identities=19% Similarity=0.232 Sum_probs=57.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+|+++||.|+ +++|.+.++.+...|+ +|+.+++++++++.+.+....+....+....+..+.+.+.. +++|+++++.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~id~lVn~a 82 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGA-KVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEV-ERLDVLFNVA 82 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHC-SCCSEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHhccCCceeeeecccccccccccccc-ccceeEEecc
Confidence 6789999987 9999999999999999 99999999998877765444333322222344444444433 3799999998
Q ss_pred CC
Q 022865 273 GN 274 (291)
Q Consensus 273 g~ 274 (291)
|.
T Consensus 83 g~ 84 (245)
T d2ag5a1 83 GF 84 (245)
T ss_dssp CC
T ss_pred cc
Confidence 84
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.41 E-value=0.00024 Score=58.63 Aligned_cols=79 Identities=19% Similarity=0.273 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCC-CCchHHHHHHhhcC--CCccEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKD-HDKPIQQVLVDLTD--GGVDYS 268 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~-~~~~~~~~v~~~~~--gg~d~v 268 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+.+ ++....+..+- +.++..+.+.+... +++|++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil 83 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGA-RVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 83 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 5899999987 9999999999889999 99999999998877654 44323332221 22333333333322 479999
Q ss_pred EEcCC
Q 022865 269 FECIG 273 (291)
Q Consensus 269 ~d~~g 273 (291)
+++.|
T Consensus 84 VnnAG 88 (250)
T d1ydea1 84 VNNAG 88 (250)
T ss_dssp EECCC
T ss_pred Eeccc
Confidence 99988
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=97.32 E-value=0.00033 Score=55.16 Aligned_cols=75 Identities=20% Similarity=0.206 Sum_probs=53.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-c----CC-CEEeCCCCCCchHHHHHHhhcCCCc
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-F----GV-TEFVNPKDHDKPIQQVLVDLTDGGV 265 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~----ga-~~~i~~~~~~~~~~~~v~~~~~gg~ 265 (291)
-+++++||+|+ |++|...+..+...|+ +|+.+++++++.+.+.+ + .. ....+..+ .+.+.+.. +++
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~-~~i 93 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLAGEGA-EVVLCGRKLDKAQAAADSVNKRFKVNVTAAETAD-----DASRAEAV-KGA 93 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCS-----HHHHHHHT-TTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhcc-chhhcccchHHHHHHHHHHHhccchhhhhhhccc-----HHHHHHHh-cCc
Confidence 47899999997 9999999999999999 89999999988765532 2 21 12233222 22344433 369
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++|+++|.
T Consensus 94 Dilin~Ag~ 102 (191)
T d1luaa1 94 HFVFTAGAI 102 (191)
T ss_dssp SEEEECCCT
T ss_pred CeeeecCcc
Confidence 999999873
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.31 E-value=0.00031 Score=57.72 Aligned_cols=79 Identities=18% Similarity=0.163 Sum_probs=55.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCEE-e--CCCCCCchHHHHHHhhcC--CCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTEF-V--NPKDHDKPIQQVLVDLTD--GGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~~-i--~~~~~~~~~~~~v~~~~~--gg~d 266 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +++.... + |..+ .++..+.+.+... +++|
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~id 82 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGA-KVVFGDILDEEGKAMAAELADAARYVHLDVTQ-PAQWKAAVDTAVTAFGGLH 82 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhhCcceEEEeecCC-HHHHHHHHHHHHHHhCCCe
Confidence 5789999987 9999999999989999 8999999998876654 5543322 2 2222 2333333433322 4799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 83 ilinnAG~ 90 (244)
T d1nffa_ 83 VLVNNAGI 90 (244)
T ss_dssp EEEECCCC
T ss_pred EEEECCcc
Confidence 99999884
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=97.27 E-value=0.001 Score=54.86 Aligned_cols=79 Identities=22% Similarity=0.267 Sum_probs=55.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCE-Ee--CCCCCCchH---HHHHHhhcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTE-FV--NPKDHDKPI---QQVLVDLTD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~---~~~v~~~~~ 262 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++.+... .+ |..+ .++. .+.+.+..+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~ 82 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS-RTERDKLMQTVAHVFD 82 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCC-HHHHHHHHHHHHHHhC
Confidence 6899999987 9999999999999999 999999998776544 3345433 22 3222 2222 233344444
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+..|+++++.|.
T Consensus 83 g~idilinnag~ 94 (258)
T d1ae1a_ 83 GKLNILVNNAGV 94 (258)
T ss_dssp SCCCEEEECCCC
T ss_pred CCcEEEeccccc
Confidence 579999998884
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=97.26 E-value=0.00031 Score=58.05 Aligned_cols=79 Identities=23% Similarity=0.281 Sum_probs=56.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEe---CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV---NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i---~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++++..... |..+ .++..+.+.+.. .|++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g~iD 81 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGA-RVAIADINLEAARATAAEIGPAACAIALDVTD-QASIDRCVAELLDRWGSID 81 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTE-EEEEEESCHHHHHHHHHHHCTTEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEeeCCC-HHHHHHHHHHHHHHhCCcc
Confidence 5789999987 9999999999999999 899999998877654 567654422 3222 233333343332 24899
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 82 ilVnnAg~ 89 (256)
T d1k2wa_ 82 ILVNNAAL 89 (256)
T ss_dssp EEEECCCC
T ss_pred EEEeeccc
Confidence 99999883
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=97.26 E-value=0.00036 Score=57.66 Aligned_cols=79 Identities=25% Similarity=0.269 Sum_probs=55.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++++... .+ |..+ .++..+.+.+.. .+++|
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 81 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATARELGDAARYQHLDVTI-EEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTTGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCceEEEEcccCC-HHHHHHHHHHHHHHcCCcc
Confidence 5789999987 9999999988888999 899999998887655 4565432 22 2222 233333333322 24799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 82 ilVnnAg~ 89 (254)
T d1hdca_ 82 GLVNNAGI 89 (254)
T ss_dssp EEEECCCC
T ss_pred EEEecCcc
Confidence 99999884
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=97.25 E-value=0.0004 Score=57.25 Aligned_cols=80 Identities=20% Similarity=0.217 Sum_probs=56.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEe-CCCC-CCchHHHHHHhhc--CCCccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFV-NPKD-HDKPIQQVLVDLT--DGGVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i-~~~~-~~~~~~~~v~~~~--~gg~d~ 267 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++..... ..+- +..+..+.+.+.. .+++|+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi 83 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence 5789999987 9999999998889999 899999999887655 467654433 2221 1223333333322 247999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
++++.|.
T Consensus 84 lVnnAG~ 90 (253)
T d1hxha_ 84 LVNNAGI 90 (253)
T ss_dssp EEECCCC
T ss_pred EEecccc
Confidence 9999984
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=97.24 E-value=0.0005 Score=56.57 Aligned_cols=79 Identities=20% Similarity=0.360 Sum_probs=54.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ +++|.+.. + |..+ ..++.+.+.+.. .
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 81 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSN-YEEVKKLLEAVKEKF 81 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTC-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCC-HHHHHHHHHHHHHHc
Confidence 5789999987 9999999999999999 899999998876433 34565432 2 3322 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
|++|++++++|.
T Consensus 82 g~iDiLVnnAG~ 93 (251)
T d1vl8a_ 82 GKLDTVVNAAGI 93 (251)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 479999999884
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=97.23 E-value=0.0005 Score=56.86 Aligned_cols=79 Identities=22% Similarity=0.399 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +.|.+.. + |..+ .+++.+.+.+.. .|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g 81 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTS-EEAVIGTVDSVVRDFG 81 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTC-HHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHhC
Confidence 5889999987 9999999988889999 8999999998876553 3444332 2 2222 233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 82 ~iDilVnnaG~ 92 (260)
T d1zema1 82 KIDFLFNNAGY 92 (260)
T ss_dssp CCCEEEECCCC
T ss_pred CCCeehhhhcc
Confidence 79999999873
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.21 E-value=0.0013 Score=50.19 Aligned_cols=87 Identities=11% Similarity=-0.068 Sum_probs=56.5
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+++|+|+|+|.+|...++.+...|+ .|++++++.++.+.+.+......+..... .......... ...|.++.++..
T Consensus 2 ~K~IliiGaG~~G~~~a~~L~~~g~-~V~v~dr~~~~a~~l~~~~~~~~~~~~~~--~~~~~~~~~i-~~~~~~i~~~~~ 77 (182)
T d1e5qa1 2 TKSVLMLGSGFVTRPTLDVLTDSGI-KVTVACRTLESAKKLSAGVQHSTPISLDV--NDDAALDAEV-AKHDLVISLIPY 77 (182)
T ss_dssp CCEEEEECCSTTHHHHHHHHHTTTC-EEEEEESCHHHHHHHHTTCTTEEEEECCT--TCHHHHHHHH-TTSSEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECChHHHHHHHhcccccccccccc--cchhhhHhhh-hccceeEeeccc
Confidence 5799999999999999998888899 89999999999887765333333222221 1111122211 147888888776
Q ss_pred hHHHHHHHHHh
Q 022865 275 VSVMRAALECC 285 (291)
Q Consensus 275 ~~~~~~~~~~l 285 (291)
......+..++
T Consensus 78 ~~~~~~~~~~~ 88 (182)
T d1e5qa1 78 TFHATVIKSAI 88 (182)
T ss_dssp GGHHHHHHHHH
T ss_pred hhhhHHHHHHH
Confidence 55444444443
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.20 E-value=0.00096 Score=49.00 Aligned_cols=81 Identities=20% Similarity=0.350 Sum_probs=57.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
++++|+|.|.+|...++.+...|. .|++++.++++.+.+++.+...++- +..+.+ .+.+..-..+|.++-++++.
T Consensus 1 k~~iIiG~G~~G~~la~~L~~~g~-~vvvid~d~~~~~~~~~~~~~~~~g-d~~~~~---~l~~a~i~~a~~vi~~~~~~ 75 (134)
T d2hmva1 1 KQFAVIGLGRFGGSIVKELHRMGH-EVLAVDINEEKVNAYASYATHAVIA-NATEEN---ELLSLGIRNFEYVIVAIGAN 75 (134)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CCEEEESCHHHHHHTTTTCSEEEEC-CTTCTT---HHHHHTGGGCSEEEECCCSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEecCcHHHHHHHHHhCCcceee-ecccch---hhhccCCccccEEEEEcCch
Confidence 357888999999999999999999 8999999999999998887654442 221223 23333222689888888765
Q ss_pred HHHHHH
Q 022865 276 SVMRAA 281 (291)
Q Consensus 276 ~~~~~~ 281 (291)
......
T Consensus 76 ~~~~~~ 81 (134)
T d2hmva1 76 IQASTL 81 (134)
T ss_dssp HHHHHH
T ss_pred HHhHHH
Confidence 433333
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.20 E-value=0.00062 Score=52.51 Aligned_cols=44 Identities=14% Similarity=0.151 Sum_probs=38.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
..++++|||+|+|+.+.+++..+..+|+ +|+.+.++.+|.+.+.
T Consensus 15 ~~~~k~vlIlGaGGaarai~~al~~~g~-~i~I~nRt~~ka~~l~ 58 (170)
T d1nyta1 15 IRPGLRILLIGAGGASRGVLLPLLSLDC-AVTITNRTVSRAEELA 58 (170)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHhcccce-EEEeccchHHHHHHHH
Confidence 4578999999999999999999999999 7999999988866553
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.19 E-value=0.0013 Score=54.26 Aligned_cols=79 Identities=16% Similarity=0.192 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHh---hcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVD---LTD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~---~~~ 262 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+... .+ |..+ .++..+.+.+ ..+
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 84 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSS-RSERQELMNTVANHFH 84 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTC-HHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCC-HHHHHHHHHHHHHHhC
Confidence 6889999987 9999999988889999 8999999998875542 334332 22 2222 2333333333 333
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 85 ~~idilvnnAG~ 96 (259)
T d2ae2a_ 85 GKLNILVNNAGI 96 (259)
T ss_dssp TCCCEEEECCCC
T ss_pred CCceEEEECCce
Confidence 479999999884
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.18 E-value=0.0015 Score=50.41 Aligned_cols=85 Identities=20% Similarity=0.219 Sum_probs=57.9
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCC--------CchHHHHHHhhcCCCccE
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDH--------DKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~--------~~~~~~~v~~~~~gg~d~ 267 (291)
+++.|+|+|.+|++.+..+...|+ .|+.+++++++.+.+++.+.......... ..+..+.+ ..+|+
T Consensus 2 k~iaIiGaG~~G~~~A~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-----~~aD~ 75 (184)
T d1bg6a2 2 KTYAVLGLGNGGHAFAAYLALKGQ-SVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAV-----KDADV 75 (184)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHH-----TTCSE
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHh-----cCCCE
Confidence 689999999999999999999999 99999999999988877653221110000 01122222 14888
Q ss_pred EEEcCCChHHHHHHHHHhhc
Q 022865 268 SFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 268 v~d~~g~~~~~~~~~~~l~~ 287 (291)
+|-++.... ....++.+++
T Consensus 76 iii~v~~~~-~~~~~~~i~~ 94 (184)
T d1bg6a2 76 ILIVVPAIH-HASIAANIAS 94 (184)
T ss_dssp EEECSCGGG-HHHHHHHHGG
T ss_pred EEEEEchhH-HHHHHHHhhh
Confidence 888887754 5555555544
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.17 E-value=0.0016 Score=53.92 Aligned_cols=96 Identities=21% Similarity=0.214 Sum_probs=67.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....++||++||=+|+|. |.+++.+|++.+ -.+|+++|.+++..+.+++ ++....+..... + +...
T Consensus 95 Ii~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~--d----~~~~ 167 (266)
T d1o54a_ 95 IAMMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR--D----ISEG 167 (266)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC--C----GGGC
T ss_pred HHHhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec--c----cccc
Confidence 56788999999999999877 788889999886 2389999999998888754 454222111110 1 1122
Q ss_pred cC-CCccEEEEcCCC-hHHHHHHHHHhhcc
Q 022865 261 TD-GGVDYSFECIGN-VSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~-gg~d~v~d~~g~-~~~~~~~~~~l~~~ 288 (291)
.. ..+|.|+--+.. ...++.+.+.|+++
T Consensus 168 ~~~~~~D~V~~d~p~p~~~l~~~~~~LKpG 197 (266)
T d1o54a_ 168 FDEKDVDALFLDVPDPWNYIDKCWEALKGG 197 (266)
T ss_dssp CSCCSEEEEEECCSCGGGTHHHHHHHEEEE
T ss_pred ccccceeeeEecCCCHHHHHHHHHhhcCCC
Confidence 22 268876666665 46789999999998
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=97.17 E-value=0.0038 Score=45.59 Aligned_cols=76 Identities=22% Similarity=0.320 Sum_probs=56.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-cCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-FGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|+|+|.|.+|...++.+...|. .|++++.++++.+.+.+ ++.. ++.-+. .-.+.+.+..-..+|.++-+++++
T Consensus 2 ~IvI~G~G~~G~~la~~L~~~g~-~v~vid~d~~~~~~~~~~~~~~-vi~Gd~---~~~~~l~~~~i~~a~~vv~~t~~d 76 (132)
T d1lssa_ 2 YIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDKDICKKASAEIDAL-VINGDC---TKIKTLEDAGIEDADMYIAVTGKE 76 (132)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCSSE-EEESCT---TSHHHHHHTTTTTCSEEEECCSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-CcceecCChhhhhhhhhhhhhh-hccCcc---cchhhhhhcChhhhhhhcccCCcH
Confidence 58999999999999999999998 99999999999887754 5553 443222 122344444334799999999886
Q ss_pred HH
Q 022865 276 SV 277 (291)
Q Consensus 276 ~~ 277 (291)
..
T Consensus 77 ~~ 78 (132)
T d1lssa_ 77 EV 78 (132)
T ss_dssp HH
T ss_pred HH
Confidence 53
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=97.16 E-value=0.00043 Score=57.78 Aligned_cols=78 Identities=19% Similarity=0.258 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-e--CCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++++.... + |..+ .++..+.+.+.. -+++|
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGA-KVAVLDKSAERLAELETDHGDNVLGIVGDVRS-LEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCCeeEEeccccc-HHHHHHHHHHHHHHhCCcc
Confidence 5899999987 9999999999989999 999999999887555 45654332 2 2222 233333333322 24799
Q ss_pred EEEEcCC
Q 022865 267 YSFECIG 273 (291)
Q Consensus 267 ~v~d~~g 273 (291)
+++++.|
T Consensus 82 ilvnnAG 88 (276)
T d1bdba_ 82 TLIPNAG 88 (276)
T ss_dssp EEECCCC
T ss_pred ccccccc
Confidence 9999987
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=97.15 E-value=0.0004 Score=56.93 Aligned_cols=79 Identities=30% Similarity=0.392 Sum_probs=55.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCCE---EeCCCCCCchHHHHHHhhc--CCCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVTE---FVNPKDHDKPIQQVLVDLT--DGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~~---~i~~~~~~~~~~~~v~~~~--~gg~d 266 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +++... ..|..+ ..+..+.+.+.. .|++|
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~-~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~iD 80 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGA-KVIGTATSENGAQAISDYLGANGKGLMLNVTD-PASIESVLEKIRAEFGEVD 80 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGGGEEEEECCTTC-HHHHHHHHHHHHHHTCSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHhCCCCcEEEEEecC-HHHhhhhhhhhhcccCCcc
Confidence 5789999987 9999999998889999 9999999998876554 555432 123222 233333344332 24899
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 81 ilVnnAg~ 88 (243)
T d1q7ba_ 81 ILVNNAGI 88 (243)
T ss_dssp EEEECCCC
T ss_pred eehhhhhh
Confidence 99999874
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.00051 Score=56.65 Aligned_cols=80 Identities=20% Similarity=0.251 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-eCCCC-CCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-VNPKD-HDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~gg 264 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++.|.... +..+- +.++..+.+.+.. .++
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~ 88 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 6889999987 9999999988888999 899999998876554 34454332 22221 1223333333322 147
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 89 iDilvnnAG~ 98 (255)
T d1fmca_ 89 VDILVNNAGG 98 (255)
T ss_dssp CCEEEECCCC
T ss_pred CCEeeeCCcC
Confidence 9999999884
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.09 E-value=0.0007 Score=55.87 Aligned_cols=80 Identities=20% Similarity=0.319 Sum_probs=54.7
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC-EE--e--CCCCCCchHHHHHHhhc-
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EF--V--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~-~~--i--~~~~~~~~~~~~v~~~~- 261 (291)
-+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+.. .+ + |..+ +++..+.+.+..
T Consensus 8 lk~Kv~lITGas~GIG~aiA~~la~~G~-~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~-~~~v~~~v~~~~~ 85 (257)
T d1xg5a_ 8 WRDRLALVTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSN-EEDILSMFSAIRS 85 (257)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTC-HHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCC-HHHHHHHHHHHHH
Confidence 35789999987 9999999988889999 8999999998866542 23321 22 2 2222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.+++|++|+++|.
T Consensus 86 ~~g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 86 QHSGVDICINNAGL 99 (257)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hcCCCCEEEecccc
Confidence 2479999999885
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.09 E-value=0.00014 Score=58.72 Aligned_cols=96 Identities=18% Similarity=0.131 Sum_probs=67.4
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+....+++++++||.+|+|. |+.++.+++..|. +|++++.+++-.+.++ ++|.+.+.....+... - ...
T Consensus 70 ml~~L~l~~g~~VLeIGsGs-GY~taila~l~g~-~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~---g--~~~ 142 (215)
T d1jg1a_ 70 MLEIANLKPGMNILEVGTGS-GWNAALISEIVKT-DVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---G--FPP 142 (215)
T ss_dssp HHHHHTCCTTCCEEEECCTT-SHHHHHHHHHHCS-CEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C--CGG
T ss_pred HHHhhccCccceEEEecCCC-ChhHHHHHHhhCc-eeEEEeccHHHHHHHHHHHHHcCCceeEEEECcccc---C--Ccc
Confidence 45778899999999999876 8888889988885 8999999987665553 4665543322221100 0 011
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+.||.|+-+.+.+......++.|+++
T Consensus 143 ~~pfD~Iiv~~a~~~ip~~l~~qL~~g 169 (215)
T d1jg1a_ 143 KAPYDVIIVTAGAPKIPEPLIEQLKIG 169 (215)
T ss_dssp GCCEEEEEECSBBSSCCHHHHHTEEEE
T ss_pred cCcceeEEeecccccCCHHHHHhcCCC
Confidence 237999988877666567788889988
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=97.06 E-value=0.00095 Score=55.09 Aligned_cols=79 Identities=15% Similarity=0.169 Sum_probs=54.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-E--eCCCCCCchHHHHH---HhhcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-F--VNPKDHDKPIQQVL---VDLTD 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~--i~~~~~~~~~~~~v---~~~~~ 262 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+... . .|..+ .++..+.+ .+..+
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~~ 84 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASL-RPEREKLMQTVSSMFG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCC-HHHHHHHHHHHHHHhC
Confidence 5889999987 9999999999989999 9999999998876553 223322 2 23222 22333333 33334
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 85 g~idilvnnAG~ 96 (259)
T d1xq1a_ 85 GKLDILINNLGA 96 (259)
T ss_dssp TCCSEEEEECCC
T ss_pred CCcccccccccc
Confidence 579999999885
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.06 E-value=0.00081 Score=54.90 Aligned_cols=79 Identities=18% Similarity=0.298 Sum_probs=56.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEE-e--CCCCCCchHHHHHHhhcC--CCcc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEF-V--NPKDHDKPIQQVLVDLTD--GGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~-i--~~~~~~~~~~~~v~~~~~--gg~d 266 (291)
+|+++||+|+ +++|.+.++-+...|+ +|+.+++++++++.+ ++++.... + |.. +.++..+.+.+... +++|
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls-~~~~i~~~~~~i~~~~g~iD 81 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGA-SLVAVDREERLLAEAVAALEAEAIAVVADVS-DPKAVEAVFAEALEEFGRLH 81 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTCCSSEEEEECCTT-SHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHcCCceEEEEecCC-CHHHHHHHHHHHHHHhCCcc
Confidence 5789999988 9999999999999999 999999999887655 45665432 2 222 22344343443332 4799
Q ss_pred EEEEcCCC
Q 022865 267 YSFECIGN 274 (291)
Q Consensus 267 ~v~d~~g~ 274 (291)
+++++.|.
T Consensus 82 iLinnAg~ 89 (241)
T d2a4ka1 82 GVAHFAGV 89 (241)
T ss_dssp EEEEGGGG
T ss_pred Eecccccc
Confidence 99998773
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=97.05 E-value=0.00093 Score=55.37 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=55.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC---CEEe--CCCCCCchHHHHHHhhc--CCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV---TEFV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga---~~~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. ++.. ...+ |..+ .+++.+.+.+.. .++
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~ 82 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGA-KVVIADIADDHGQKVCNNIGSPDVISFVHCDVTK-DEDVRNLVDTTIAKHGK 82 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTC-HHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcCCCceEEEEccCCC-HHHHHHHHHHHHHHcCC
Confidence 6789999987 9999999988889999 8999999998876654 4432 1222 2222 233434343322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 83 iD~lVnnAG~ 92 (268)
T d2bgka1 83 LDIMFGNVGV 92 (268)
T ss_dssp CCEEEECCCC
T ss_pred cceecccccc
Confidence 9999999873
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.03 E-value=4.9e-05 Score=61.38 Aligned_cols=97 Identities=18% Similarity=0.137 Sum_probs=66.8
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
+.....+++|++||-+|+|. |..++.+++..|. .+|++++.+++..+.+++ .+.+.+.....+..+ . ..
T Consensus 67 ~l~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~---~--~~ 140 (213)
T d1dl5a1 67 FMEWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYY---G--VP 140 (213)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---C--CG
T ss_pred HHHhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHH---c--cc
Confidence 45778899999999999877 8888899998863 389999999988877754 233222111110000 0 01
Q ss_pred cCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 261 TDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
..+.||+|+...+-.......++.|+++
T Consensus 141 ~~~~fD~I~~~~~~~~~p~~l~~~LkpG 168 (213)
T d1dl5a1 141 EFSPYDVIFVTVGVDEVPETWFTQLKEG 168 (213)
T ss_dssp GGCCEEEEEECSBBSCCCHHHHHHEEEE
T ss_pred cccchhhhhhhccHHHhHHHHHHhcCCC
Confidence 1236999998876555556778889998
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.03 E-value=0.0011 Score=54.33 Aligned_cols=79 Identities=16% Similarity=0.208 Sum_probs=54.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~--~g 263 (291)
.|+++||.|+ +++|...+..+...|+ +|+.+++++++++.+. +.|... .+ |..+ .++....+.... .+
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~-~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~g 83 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSN-REDIYSSAKKVKAEIG 83 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcC
Confidence 5789999988 9999998888888899 9999999998876552 344432 22 2222 223333343322 34
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
..|+++++.|.
T Consensus 84 ~idilinnag~ 94 (244)
T d1yb1a_ 84 DVSILVNNAGV 94 (244)
T ss_dssp CCSEEEECCCC
T ss_pred CCceeEeeccc
Confidence 79999999884
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.02 E-value=0.0011 Score=54.44 Aligned_cols=78 Identities=19% Similarity=0.262 Sum_probs=53.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
|+.+||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++.|.... + |..+ .++..+.+.+.. .++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~g~ 79 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS-VPEIEALVAAVVERYGP 79 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHTCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCC-HHHHHHHHHHHHHHhCC
Confidence 678899987 9999999998889999 899999998876654 34454332 2 2222 233333333322 247
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|++++++|.
T Consensus 80 iDilVnnAG~ 89 (257)
T d2rhca1 80 VDVLVNNAGR 89 (257)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEecccc
Confidence 9999999884
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.02 E-value=0.0011 Score=54.78 Aligned_cols=78 Identities=21% Similarity=0.280 Sum_probs=53.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----c--CCCE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----F--GVTE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~--ga~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
+|+++||.|+ +++|++.++.+...|+ +|+.+++++++++.+.+ . +... .+ |..+ .++..+.+.+..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~~ 80 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSD-EAQVEAYVTATTER 80 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCC-HHHHHHHHHHHHHH
Confidence 5789999987 9999999999999999 99999999988765432 2 2221 12 3322 233333333322
Q ss_pred CCCccEEEEcCC
Q 022865 262 DGGVDYSFECIG 273 (291)
Q Consensus 262 ~gg~d~v~d~~g 273 (291)
.|++|+++++.|
T Consensus 81 ~G~iDiLVnnAG 92 (258)
T d1iy8a_ 81 FGRIDGFFNNAG 92 (258)
T ss_dssp HSCCSEEEECCC
T ss_pred hCCCCEEEECCc
Confidence 247999999987
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.02 E-value=0.0022 Score=51.91 Aligned_cols=72 Identities=21% Similarity=0.186 Sum_probs=51.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEe-CCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++ +.+...+. |.. ..+...+.++ +.+|+++++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga-~V~~~~r~~~~l~---~~~~~~~~~Dv~---~~~~~~~~~~--g~iD~lVnn 73 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGA-EVTICARNEELLK---RSGHRYVVCDLR---KDLDLLFEKV--KEVDILVLN 73 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHH---HTCSEEEECCTT---TCHHHHHHHS--CCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHH---hcCCcEEEcchH---HHHHHHHHHh--CCCcEEEec
Confidence 5789999987 9999999999999999 8999999887654 44443332 222 2233333332 479999999
Q ss_pred CCC
Q 022865 272 IGN 274 (291)
Q Consensus 272 ~g~ 274 (291)
+|.
T Consensus 74 AG~ 76 (234)
T d1o5ia_ 74 AGG 76 (234)
T ss_dssp CCC
T ss_pred ccc
Confidence 874
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.01 E-value=0.0022 Score=49.82 Aligned_cols=41 Identities=17% Similarity=0.327 Sum_probs=35.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDR 234 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~ 234 (291)
++++|+|+|+|+.+.+++..+...|+++++.+.+++++.+.
T Consensus 17 ~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~ 57 (182)
T d1vi2a1 17 KGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDK 57 (182)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHH
Confidence 67899999999999999999999999899999998776543
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.00 E-value=0.00099 Score=54.75 Aligned_cols=79 Identities=22% Similarity=0.292 Sum_probs=54.2
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc----CC-CE-Ee--CCCCCCchHHHHHHhhc--
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF----GV-TE-FV--NPKDHDKPIQQVLVDLT-- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~----ga-~~-~i--~~~~~~~~~~~~v~~~~-- 261 (291)
.|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. ++ .. .. .+ |..+ .+++.+.+.+..
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~~ 79 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVAD-QQQLRDTFRKVVDH 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTS-HHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCC-HHHHHHHHHHHHHH
Confidence 5789999987 9999999999989999 9999999998876553 22 11 11 12 2222 233333343332
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.|++|++++++|.
T Consensus 80 ~G~iDilVnnAg~ 92 (254)
T d2gdza1 80 FGRLDILVNNAGV 92 (254)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCcCeecccccc
Confidence 2479999999884
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=96.99 E-value=0.0011 Score=55.55 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HhcCCCE-EeCCCCCC-chHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----KNFGVTE-FVNPKDHD-KPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-----~~~ga~~-~i~~~~~~-~~~~~~v~~~~--~g 263 (291)
+|+++||+|+ +++|.+.+..+...|+ +|+.+++++++++.+ .+.|... .+..+-.+ .+....+.... .+
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga-~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 102 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG 102 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence 5799999987 9999999988889999 999999998875433 3344433 23222212 23322233222 34
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 103 ~iDilvnnAg~ 113 (294)
T d1w6ua_ 103 HPNIVINNAAG 113 (294)
T ss_dssp SCSEEEECCCC
T ss_pred ccchhhhhhhh
Confidence 89999999884
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=96.95 E-value=0.0015 Score=53.50 Aligned_cols=79 Identities=19% Similarity=0.225 Sum_probs=53.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh--HHHHHhcCCCEE-e--CCCCCCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK--FDRAKNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~--~~~~~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++ .+.++++|.... + |..+ ..+..+.+.+.. .|++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~-~~~v~~~~~~~~~~~G~i 81 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGA-DIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQ-PGDVEAFGKQVISTFGRC 81 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCHHHHHHHHHTTCCEEEEECCTTC-HHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHHHcCCcEEEEEeeCCC-HHHHHHHHHHHHHHcCCC
Confidence 5789999987 9999999999999999 89998887643 344456665432 2 2222 233333333322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++++++|.
T Consensus 82 DilVnnAG~ 90 (247)
T d2ew8a1 82 DILVNNAGI 90 (247)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999884
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=96.94 E-value=0.00097 Score=54.74 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=54.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC--C-EEeCCCC-CCchHHHHHHhhc--CCCc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV--T-EFVNPKD-HDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga--~-~~i~~~~-~~~~~~~~v~~~~--~gg~ 265 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +++. . ..+..+- +..+..+.+.+.. .|++
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 83 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGA-KVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence 5789999987 9999999999889999 8999999998877664 3332 1 2222221 1223333333322 2489
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|+++++.|.
T Consensus 84 DiLVnnAg~ 92 (251)
T d1zk4a1 84 STLVNNAGI 92 (251)
T ss_dssp CEEEECCCC
T ss_pred eEEEecccc
Confidence 999999884
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.93 E-value=0.00093 Score=55.60 Aligned_cols=79 Identities=19% Similarity=0.246 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC--E--Ee--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--E--FV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~--~--~i--~~~~~~~~~~~~v~~~~- 261 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++++++.+. +.+.. . .+ |..+ ..+..+.+.+..
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~-~~~v~~~~~~~~~ 80 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTE-ASGQDDIINTTLA 80 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCC-HHHHHHHHHHHHH
Confidence 5789999987 9999999998889999 9999999998876553 33321 1 22 3222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.|++|+++++.|.
T Consensus 81 ~~G~iDilVnnAG~ 94 (274)
T d1xhla_ 81 KFGKIDILVNNAGA 94 (274)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCceEEEeeccc
Confidence 2479999999873
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.93 E-value=0.0015 Score=55.00 Aligned_cols=80 Identities=14% Similarity=0.248 Sum_probs=54.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hc--------CCCEE-e--CCCCCCchHHHHHHh
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NF--------GVTEF-V--NPKDHDKPIQQVLVD 259 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~--------ga~~~-i--~~~~~~~~~~~~v~~ 259 (291)
-+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. ++ +.... + |..+ .+++.+.+.+
T Consensus 10 L~gKvalITGas~GIG~aia~~la~~Ga-~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~ 87 (297)
T d1yxma1 10 LQGQVAIVTGGATGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRN-EEEVNNLVKS 87 (297)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTC-HHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCC-HHHHHHHHHH
Confidence 36899999987 9999999988889999 8999999988765442 22 22221 2 2222 2333444443
Q ss_pred hc--CCCccEEEEcCCC
Q 022865 260 LT--DGGVDYSFECIGN 274 (291)
Q Consensus 260 ~~--~gg~d~v~d~~g~ 274 (291)
.. .+++|+++++.|.
T Consensus 88 ~~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 88 TLDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHhCCeEEEEeeccc
Confidence 32 2479999999884
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=96.93 E-value=0.00077 Score=55.62 Aligned_cols=79 Identities=22% Similarity=0.237 Sum_probs=53.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-----HhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ +++|.+.. + |..+ .++..+.+.+.. .
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~ 85 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGA-NVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSN-TDIVTKTIQQIDADL 85 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTC-HHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 5789999987 9999999999989999 899999988765433 34554332 2 2222 233333333322 3
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 86 g~iDilVnnAg~ 97 (260)
T d1h5qa_ 86 GPISGLIANAGV 97 (260)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCcEecccccc
Confidence 589999999873
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.92 E-value=0.00088 Score=55.68 Aligned_cols=79 Identities=18% Similarity=0.228 Sum_probs=54.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC--E--Ee--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT--E--FV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~--~--~i--~~~~~~~~~~~~v~~~~- 261 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+.. . .+ |..+ ..+..+.+.+..
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga-~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~~~~ 81 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTT-EDGQDQIINSTLK 81 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCC-HHHHHHHHHHHHH
Confidence 5789999987 9999999999989999 9999999998876553 23321 1 22 3222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.|++|+++++.|.
T Consensus 82 ~~g~iDilvnnAG~ 95 (272)
T d1xkqa_ 82 QFGKIDVLVNNAGA 95 (272)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HhCCceEEEeCCcc
Confidence 2479999999874
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.92 E-value=0.003 Score=52.13 Aligned_cols=97 Identities=20% Similarity=0.240 Sum_probs=66.4
Q ss_pred hhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cC---CCEE-eCCCCCCchHHH
Q 022865 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG---VTEF-VNPKDHDKPIQQ 255 (291)
Q Consensus 185 ~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~g---a~~~-i~~~~~~~~~~~ 255 (291)
.+.....++||++||=.|+|. |.++..+|++.|. .+|++++.+++.++.+++ ++ .+.+ +...+ ..+
T Consensus 87 ~Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d----~~~ 161 (264)
T d1i9ga_ 87 QIVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSD----LAD 161 (264)
T ss_dssp HHHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSC----GGG
T ss_pred HHHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecc----ccc
Confidence 356788999999999998876 8889999999863 389999999999888864 11 1111 11111 100
Q ss_pred HHHhhcCCCccEEEEcCCC-hHHHHHHHHHhhcc
Q 022865 256 VLVDLTDGGVDYSFECIGN-VSVMRAALECCHKV 288 (291)
Q Consensus 256 ~v~~~~~gg~d~v~d~~g~-~~~~~~~~~~l~~~ 288 (291)
..+..+.||.||--... ...+..+.+.|+++
T Consensus 162 --~~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpG 193 (264)
T d1i9ga_ 162 --SELPDGSVDRAVLDMLAPWEVLDAVSRLLVAG 193 (264)
T ss_dssp --CCCCTTCEEEEEEESSCGGGGHHHHHHHEEEE
T ss_pred --ccccCCCcceEEEecCCHHHHHHHHHhccCCC
Confidence 01223379966654454 56688899999998
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=96.89 E-value=0.001 Score=54.98 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=52.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh-hHH----HHHhcCCCEE-e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK-KFD----RAKNFGVTEF-V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~-~~~----~~~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.++++.+ +++ .+++.+.+.. + |..+ .++..+.+.+.. .
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~ 83 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTV-ESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTS-HHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHHh
Confidence 5789999987 9999999988888999 8998887753 333 3345555332 2 2222 233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
|++|++++++|.
T Consensus 84 G~iDiLVnnAG~ 95 (261)
T d1geea_ 84 GKLDVMINNAGL 95 (261)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEeecccee
Confidence 479999999884
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.88 E-value=0.0011 Score=54.38 Aligned_cols=79 Identities=22% Similarity=0.268 Sum_probs=54.0
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~g 263 (291)
+++++||+|+ +++|++.++.+...|+ +|+.+++++++++.+ ++.|.... + |..+ .++..+.+.+.. .|
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~~~g 86 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVS-HVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSK-KEEISEVINKILTEHK 86 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSS-EEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTC-HHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCC-HHHHHHHHHHHHHhcC
Confidence 4688999987 9999999888888899 999999998877554 33454322 2 2222 233333443322 34
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 87 ~iDilvnnag~ 97 (251)
T d2c07a1 87 NVDILVNNAGI 97 (251)
T ss_dssp CCCEEEECCCC
T ss_pred Cceeeeecccc
Confidence 89999998874
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.88 E-value=0.00062 Score=53.90 Aligned_cols=74 Identities=20% Similarity=0.194 Sum_probs=50.5
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.++|+|+|+ |.+|...+..+...|+ +|+++.++++++.....-++. ++.-+-.+. +.+.+... ++|+||.++|
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~-~~~gD~~d~---~~l~~al~-~~d~vi~~~g 76 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGY-EVTVLVRDSSRLPSEGPRPAH-VVVGDVLQA---ADVDKTVA-GQDAVIVLLG 76 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCGGGSCSSSCCCSE-EEESCTTSH---HHHHHHHT-TCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEEcChhhcccccccccc-cccccccch---hhHHHHhc-CCCEEEEEec
Confidence 468999998 9999999988888898 899999998876543333443 332222112 23333322 5899999998
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 77 ~ 77 (205)
T d1hdoa_ 77 T 77 (205)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.88 E-value=0.0038 Score=47.37 Aligned_cols=43 Identities=23% Similarity=0.440 Sum_probs=38.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|.|+|.|.+|...+..++..|. +|++.++++++++.+++.+.
T Consensus 2 kI~iIG~G~mG~~lA~~l~~~g~-~V~~~d~~~~~~~~a~~~~~ 44 (165)
T d2f1ka2 2 KIGVVGLGLIGASLAGDLRRRGH-YLIGVSRQQSTCEKAVERQL 44 (165)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTS
T ss_pred EEEEEeecHHHHHHHHHHHHCCC-EEEEEECCchHHHHHHHhhc
Confidence 58899999999988888888999 99999999999999888874
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=96.87 E-value=0.00061 Score=56.04 Aligned_cols=95 Identities=13% Similarity=0.148 Sum_probs=63.1
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh----cC-CCEEeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN----FG-VTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~----~g-a~~~i~~~~~~~~~~~~v~~ 259 (291)
+.....++||++||=.|+|. |.++..+|++.+. .+|++++.+++..+.+++ ++ ...+-.... + +.+
T Consensus 77 Ii~~l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~---D----i~~ 148 (250)
T d1yb2a1 77 IIMRCGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRS---D----IAD 148 (250)
T ss_dssp ----CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECS---C----TTT
T ss_pred HHHHcCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEe---e----eec
Confidence 45678899999999999876 7788889988753 389999999998888864 22 222111111 1 112
Q ss_pred hc-CCCccEEEE-cCCChHHHHHHHHHhhcc
Q 022865 260 LT-DGGVDYSFE-CIGNVSVMRAALECCHKV 288 (291)
Q Consensus 260 ~~-~gg~d~v~d-~~g~~~~~~~~~~~l~~~ 288 (291)
.. ...||.||- .......+..+.+.|++|
T Consensus 149 ~~~~~~fD~V~ld~p~p~~~l~~~~~~LKpG 179 (250)
T d1yb2a1 149 FISDQMYDAVIADIPDPWNHVQKIASMMKPG 179 (250)
T ss_dssp CCCSCCEEEEEECCSCGGGSHHHHHHTEEEE
T ss_pred ccccceeeeeeecCCchHHHHHHHHHhcCCC
Confidence 22 237997764 444456789999999998
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=96.85 E-value=0.00085 Score=54.93 Aligned_cols=79 Identities=16% Similarity=0.203 Sum_probs=53.1
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCCE--Ee--CCCCCCchH---HHHHHhhcCC-C
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTE--FV--NPKDHDKPI---QQVLVDLTDG-G 264 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~ga~~--~i--~~~~~~~~~---~~~v~~~~~g-g 264 (291)
.++|||+|+ +++|++.++.+...|+. +|+.+.++.++++.+++..... ++ |..+ ..++ .+.+.+..+. +
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTC-DKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTC-HHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCC-HHHHHHHHHHHHHHhCCCC
Confidence 478999988 99999988777777863 6888889999888777643322 22 2222 2223 3333333333 6
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 82 idilinnAG~ 91 (250)
T d1yo6a1 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred eEEEEEcCcc
Confidence 9999999884
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.84 E-value=0.0011 Score=54.72 Aligned_cols=79 Identities=19% Similarity=0.241 Sum_probs=53.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCC----EEe--CCCCCCchHHHHHHhhc-
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVT----EFV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~----~~i--~~~~~~~~~~~~v~~~~- 261 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+. +.+.. ..+ |..+ ..+..+.+.+..
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~-~~~v~~~~~~~~~ 81 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTT-DAGQDEILSTTLG 81 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCC-HHHHHHHHHHHHH
Confidence 5788999987 9999999998889999 8999999998876553 23321 122 3222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.|++|+++++.|.
T Consensus 82 ~~g~iDilvnnAG~ 95 (264)
T d1spxa_ 82 KFGKLDILVNNAGA 95 (264)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HhCCCCEeeccccc
Confidence 2479999999884
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=96.82 E-value=0.00096 Score=54.89 Aligned_cols=80 Identities=11% Similarity=-0.003 Sum_probs=49.4
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEE--e--CCCCCCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEF--V--NPKDHDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~--i--~~~~~~~~~~~~v~~~~--~ 262 (291)
+|+++||+|+ +++|++.+..+...|+ +|+.+.+..++++.+.+ .+...+ + +...+..++.+.+.+.. .
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~-~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNL-KNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCC-SEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 5789999987 9999998888888899 66666555554433322 222221 2 22211123333343332 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|++++++|.
T Consensus 83 g~iDilvnnAG~ 94 (254)
T d1sbya1 83 KTVDILINGAGI 94 (254)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEeCCCC
Confidence 479999999984
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=96.81 E-value=0.002 Score=52.84 Aligned_cols=77 Identities=19% Similarity=0.189 Sum_probs=52.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEE-e--CCCCCCchHHHHHHhhc--CCCc
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEF-V--NPKDHDKPIQQVLVDLT--DGGV 265 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~-i--~~~~~~~~~~~~v~~~~--~gg~ 265 (291)
+.+||+|+ +++|++.+..+...|+ +|+.+++++++++.+ ++.|.+.. + |..+ .++..+.+.+.. .|++
T Consensus 2 KValITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~i 79 (255)
T d1gega_ 2 KVALVTGAGQGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD-RDQVFAAVEQARKTLGGF 79 (255)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTS-HHHHHHHHHHHHHHTTCC
T ss_pred CEEEEcCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCC-HHHHHHHHHHHHHHhCCc
Confidence 35688887 9999998888888899 999999999887654 33454332 2 2222 233333343322 2479
Q ss_pred cEEEEcCCC
Q 022865 266 DYSFECIGN 274 (291)
Q Consensus 266 d~v~d~~g~ 274 (291)
|++++++|.
T Consensus 80 DilVnnAG~ 88 (255)
T d1gega_ 80 DVIVNNAGV 88 (255)
T ss_dssp CEEEECCCC
T ss_pred cEEEecccc
Confidence 999999884
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.75 E-value=0.0021 Score=53.18 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=53.2
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh-----cCCCE-EeCCCCCCchHHHH-HHhh--cC
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN-----FGVTE-FVNPKDHDKPIQQV-LVDL--TD 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~-----~ga~~-~i~~~~~~~~~~~~-v~~~--~~ 262 (291)
-+|+++||+|+ +++|++.+..+...|+ +|+.+++++++++.+.+ .+... .+..+......... +... ..
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~-~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHh
Confidence 36899999988 9999999988888999 99999999998876632 23322 22222222222222 2221 12
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+..|+++++.|.
T Consensus 91 g~~~~li~nag~ 102 (269)
T d1xu9a_ 91 GGLDMLILNHIT 102 (269)
T ss_dssp TSCSEEEECCCC
T ss_pred CCcccccccccc
Confidence 478999987764
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=96.73 E-value=0.0037 Score=51.09 Aligned_cols=85 Identities=16% Similarity=0.216 Sum_probs=54.2
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh-------HHHHHhcCCCEE-eCCCC-CCchHHHHHHh
Q 022865 190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK-------FDRAKNFGVTEF-VNPKD-HDKPIQQVLVD 259 (291)
Q Consensus 190 ~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~-------~~~~~~~ga~~~-i~~~~-~~~~~~~~v~~ 259 (291)
..++|+.++||+|+ +++|++.+..+...|+++|+.+.++..+ .+.+++.|.... +..+- +..+..+.+.+
T Consensus 4 ~~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 4 DEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence 45789999999987 9999998888888898667777665321 223345565332 22221 12334444444
Q ss_pred hcCC-CccEEEEcCCC
Q 022865 260 LTDG-GVDYSFECIGN 274 (291)
Q Consensus 260 ~~~g-g~d~v~d~~g~ 274 (291)
.... .+|.|+++.|.
T Consensus 84 i~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAAT 99 (259)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred cccccccccccccccc
Confidence 4333 78999998884
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.68 E-value=0.0016 Score=53.53 Aligned_cols=81 Identities=17% Similarity=0.250 Sum_probs=52.1
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHH----HHhcCCCEE-eCCCC-CCchHHHHHHhhc--C
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDR----AKNFGVTEF-VNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~----~~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~ 262 (291)
-.|+++||+|+ +++|.+.++.+...|+ +|+.. .+++++++. .++.|.+.. +..+- +..+..+.+.+.. .
T Consensus 4 L~GK~alITGas~GIG~aia~~la~~G~-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 4 LAGKVALTTGAGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 35899999987 9999999999999999 77764 455554433 345665443 22222 1223333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
+++|+++++.|.
T Consensus 83 g~idilinnag~ 94 (259)
T d1ja9a_ 83 GGLDFVMSNSGM 94 (259)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCcEEEecccc
Confidence 479999999884
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=96.64 E-value=0.0048 Score=50.35 Aligned_cols=80 Identities=23% Similarity=0.330 Sum_probs=52.6
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEeCCCCCC-chHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHD-KPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~-~~~~~~v~~~~--~g 263 (291)
+|+++||+|+ | ++|.+.++.+...|+ +|+..+++++..+.++ +.+....+..+-.+ .+..+.+.+.. .+
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGA-EVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFG 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcC
Confidence 6789999997 5 799999888888999 8988888876554443 33433444333222 23333333222 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 86 ~iDilVnnag~ 96 (256)
T d1ulua_ 86 GLDYLVHAIAF 96 (256)
T ss_dssp SEEEEEECCCC
T ss_pred CceEEEecccc
Confidence 79999999874
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=96.62 E-value=0.0027 Score=52.15 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=51.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHHHH-----HhcCCCEE-eCCCC-CCchHHHHHHhhc--C
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFDRA-----KNFGVTEF-VNPKD-HDKPIQQVLVDLT--D 262 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~~~-----~~~ga~~~-i~~~~-~~~~~~~~v~~~~--~ 262 (291)
+|+++||+|+ +++|++.++.+...|+ +|+.+++++ ++++.+ .+.|.... +..+- +.++..+.+.+.. .
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga-~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 81 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 5789999987 9999999988889999 899998864 444332 23454332 22111 1233333333322 2
Q ss_pred CCccEEEEcCCC
Q 022865 263 GGVDYSFECIGN 274 (291)
Q Consensus 263 gg~d~v~d~~g~ 274 (291)
|++|++++++|.
T Consensus 82 G~iDiLVnnAG~ 93 (260)
T d1x1ta1 82 GRIDILVNNAGI 93 (260)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCcEEEeeccc
Confidence 479999999884
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.62 E-value=0.0013 Score=56.01 Aligned_cols=51 Identities=29% Similarity=0.429 Sum_probs=43.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~ 237 (291)
+.....++||++||=.|+|. |.+++.+|++.|. .+|++++.+++..+.+++
T Consensus 90 Il~~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~ 141 (324)
T d2b25a1 90 ILSMMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKK 141 (324)
T ss_dssp HHHHHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHH
Confidence 56778899999999998876 8899999999874 389999999998888754
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=96.62 E-value=0.0024 Score=52.83 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=52.5
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh-hhHH----HHHhcCCCEEe-CCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP-KKFD----RAKNFGVTEFV-NPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~-~~~~----~~~~~ga~~~i-~~~~-~~~~~~~~v~~~~--~g 263 (291)
+|+++||.|+ +++|.+.++.+...|+ +|+.++++. ++++ .+++.+.+... ..+- +.+++.+.+.+.. .+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g 95 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGC-KVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 95 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence 4789999987 9999999999999999 888876664 4333 23455654432 2221 2234444444332 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|+++++.|.
T Consensus 96 ~idilV~nag~ 106 (272)
T d1g0oa_ 96 KLDIVCSNSGV 106 (272)
T ss_dssp CCCEEEECCCC
T ss_pred CCCcccccccc
Confidence 79999998874
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.58 E-value=0.015 Score=41.13 Aligned_cols=84 Identities=14% Similarity=0.002 Sum_probs=52.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.+++|||+|+|.+|..-++.+...|+ +|++++.... ..+++.+-.. ..+.....+.+ + .++++|+-+
T Consensus 11 ~~k~vlVvG~G~va~~ka~~ll~~ga-~v~v~~~~~~~~~~~~~~~~~i-~~~~~~~~~~d-------l--~~~~lv~~a 79 (113)
T d1pjqa1 11 RDRDCLIVGGGDVAERKARLLLEAGA-RLTVNALTFIPQFTVWANEGML-TLVEGPFDETL-------L--DSCWLAIAA 79 (113)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTB-EEEEEESSCCHHHHHHHTTTSC-EEEESSCCGGG-------G--TTCSEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCChHHHHHHhcCCc-eeeccCCCHHH-------h--CCCcEEeec
Confidence 46899999999999999999999999 7777654432 2333332222 22221111111 1 268999999
Q ss_pred CCChHHHHHHHHHhhcc
Q 022865 272 IGNVSVMRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~~~~~~~~l~~~ 288 (291)
++++..-....+..++.
T Consensus 80 t~d~~~n~~i~~~a~~~ 96 (113)
T d1pjqa1 80 TDDDTVNQRVSDAAESR 96 (113)
T ss_dssp CSCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHc
Confidence 99877544554544443
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=96.53 E-value=0.0014 Score=52.93 Aligned_cols=94 Identities=14% Similarity=0.122 Sum_probs=64.3
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC----EEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT----EFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~----~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.....++++++||-+|+|. |+.++.+++. +. +|++++.+++..+.+++.-.. .++..+. .. . ...
T Consensus 62 ml~~L~l~~g~~VLdIG~Gs-Gy~ta~La~l-~~-~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~--~~---g--~~~ 131 (224)
T d1vbfa_ 62 MLDELDLHKGQKVLEIGTGI-GYYTALIAEI-VD-KVVSVEINEKMYNYASKLLSYYNNIKLILGDG--TL---G--YEE 131 (224)
T ss_dssp HHHHTTCCTTCEEEEECCTT-SHHHHHHHHH-SS-EEEEEESCHHHHHHHHHHHTTCSSEEEEESCG--GG---C--CGG
T ss_pred HHHHhhhcccceEEEecCCC-CHHHHHHHHH-hc-ccccccccHHHHHHHHHHHhcccccccccCch--hh---c--chh
Confidence 45677899999999999875 7888888875 44 899999999988888754221 1121110 00 0 011
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 262 DGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
.+.||.|+-+.+.+......++.|++||
T Consensus 132 ~~pfD~Iiv~~a~~~ip~~l~~qLk~GG 159 (224)
T d1vbfa_ 132 EKPYDRVVVWATAPTLLCKPYEQLKEGG 159 (224)
T ss_dssp GCCEEEEEESSBBSSCCHHHHHTEEEEE
T ss_pred hhhHHHHHhhcchhhhhHHHHHhcCCCC
Confidence 2479998877666666677788899983
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=96.48 E-value=0.00055 Score=56.30 Aligned_cols=74 Identities=18% Similarity=0.100 Sum_probs=49.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC----CEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----TEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga----~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
++||.|+ +++|+..+..+...|+ +|+..+++.++++.+++.+. -.+.+..+ ..++.+.+.+.. |++|+++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga-~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~-~~~~~~~~~~~~-G~iDiLVnN 78 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGH-TVACHDESFKQKDELEAFAETYPQLKPMSEQE-PAELIEAVTSAY-GQVDVLVSN 78 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTC-EEEECCGGGGSHHHHHHHHHHCTTSEECCCCS-HHHHHHHHHHHH-SCCCEEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHhhhCcEEEeccCCHHH-HHHHHHHHHHHc-CCCCEEEEC
Confidence 6889987 9999999988888999 99999998888776654322 12222211 123333333332 479999987
Q ss_pred CC
Q 022865 272 IG 273 (291)
Q Consensus 272 ~g 273 (291)
.|
T Consensus 79 Ag 80 (252)
T d1zmta1 79 DI 80 (252)
T ss_dssp CC
T ss_pred Cc
Confidence 66
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.48 E-value=0.0015 Score=52.72 Aligned_cols=90 Identities=21% Similarity=0.202 Sum_probs=62.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCC-------EEeCCCCCCchHHHHHH
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVT-------EFVNPKDHDKPIQQVLV 258 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~-------~~i~~~~~~~~~~~~v~ 258 (291)
.+++|++||-+|+|. |+.++.+|+..| ..+|++++.+++-.+.+++ .+.. .++..+. ..
T Consensus 73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~--------~~ 143 (224)
T d1i1na_ 73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDG--------RM 143 (224)
T ss_dssp TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCG--------GG
T ss_pred ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeec--------cc
Confidence 789999999999876 888889998876 3389999999988777643 2211 1111110 00
Q ss_pred hhc-CCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 259 DLT-DGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 259 ~~~-~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
... .+.||.|+-+...+......++.|++||
T Consensus 144 ~~~~~~~fD~I~~~~~~~~ip~~l~~~LkpGG 175 (224)
T d1i1na_ 144 GYAEEAPYDAIHVGAAAPVVPQALIDQLKPGG 175 (224)
T ss_dssp CCGGGCCEEEEEECSBBSSCCHHHHHTEEEEE
T ss_pred ccchhhhhhhhhhhcchhhcCHHHHhhcCCCc
Confidence 011 2379999988776666778889999983
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.43 E-value=0.0017 Score=52.79 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc--CCCccEEEE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT--DGGVDYSFE 270 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~--~gg~d~v~d 270 (291)
+++++||+|+ +++|.+.++.+...|+ +|+.+++++++.+.+.. ...|..+ .+++.+.+.+.. .+++|++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga-~V~~~~r~~~~~~~~~~----~~~Dv~~-~~~v~~~~~~~~~~~g~iDiLVn 79 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGH-KVAVTHRGSGAPKGLFG----VEVDVTD-SDAVDRAFTAVEEHQGPVEVLVS 79 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSSCCCTTSEE----EECCTTC-HHHHHHHHHHHHHHHSSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCcchhcCceE----EEEecCC-HHHHHHHHHHHHHhcCCceEEEe
Confidence 6789999988 9999999999999999 99999998876432211 1223322 233333333322 247999999
Q ss_pred cCCC
Q 022865 271 CIGN 274 (291)
Q Consensus 271 ~~g~ 274 (291)
++|.
T Consensus 80 nAG~ 83 (237)
T d1uzma1 80 NAGL 83 (237)
T ss_dssp ECSC
T ss_pred eecc
Confidence 9884
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.40 E-value=0.00036 Score=56.82 Aligned_cols=75 Identities=20% Similarity=0.209 Sum_probs=48.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCC----chHHHHHHhhcCC-CccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHD----KPIQQVLVDLTDG-GVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~----~~~~~~v~~~~~g-g~d~ 267 (291)
+|++|||+|+ +++|.+.++.+...|+ +|+.++..+.+.. .....+...... ......+.+.... ++|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~-~V~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNW-WVASIDVVENEEA-----SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSCCTTS-----SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCccccc-----cccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 4789999988 9999999999999999 8999887665321 111122221111 1223334344333 7999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
+++++|.
T Consensus 75 lInnAG~ 81 (236)
T d1dhra_ 75 ILCVAGG 81 (236)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999873
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=96.36 E-value=0.005 Score=50.64 Aligned_cols=80 Identities=10% Similarity=0.194 Sum_probs=51.3
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+|+++||+|+ | ++|.+.++.+...|+ +|+.++++++..+.++ +.+...++..+. .+.+..+.+.+.. -+
T Consensus 4 ~gK~alITGaag~~GIG~AiA~~la~~Ga-~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g 82 (274)
T d2pd4a1 4 KGKKGLIVGVANNKSIAYGIAQSCFNQGA-TLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG 82 (274)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence 5899999986 5 699999999989999 8999998875443333 222222222221 2233333333322 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++++.|.
T Consensus 83 ~id~lV~nag~ 93 (274)
T d2pd4a1 83 SLDFIVHSVAF 93 (274)
T ss_dssp CEEEEEECCCC
T ss_pred CCCeEEeeccc
Confidence 79999998874
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.33 E-value=0.014 Score=44.10 Aligned_cols=44 Identities=27% Similarity=0.612 Sum_probs=38.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|+|+|.|.+|...+..++..|. .+|+++|++++.++.+++.+.
T Consensus 3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~ 47 (171)
T d2g5ca2 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI 47 (171)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS
T ss_pred EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc
Confidence 68999999999998888888885 379999999999999988875
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.30 E-value=0.0067 Score=50.98 Aligned_cols=79 Identities=23% Similarity=0.239 Sum_probs=50.7
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh---------hhHHH-H---HhcCCCEEeCCCCCCchHHHHHHh
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP---------KKFDR-A---KNFGVTEFVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~---------~~~~~-~---~~~ga~~~i~~~~~~~~~~~~v~~ 259 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+..+.+. ++++. . ...+.....+..+ ..+..+.+..
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga-~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~v~~ 83 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDS-VEAGEKLVKT 83 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCC-GGGHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccch-HHHHHHHHHH
Confidence 5789999988 9999999999999999 898876543 22222 2 2233333444433 1233333333
Q ss_pred hc--CCCccEEEEcCCC
Q 022865 260 LT--DGGVDYSFECIGN 274 (291)
Q Consensus 260 ~~--~gg~d~v~d~~g~ 274 (291)
.. .|++|++++++|.
T Consensus 84 ~~~~~G~iDiLVnNAGi 100 (302)
T d1gz6a_ 84 ALDTFGRIDVVVNNAGI 100 (302)
T ss_dssp HHHHTSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCcc
Confidence 22 3489999999884
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.0058 Score=50.46 Aligned_cols=79 Identities=23% Similarity=0.186 Sum_probs=48.6
Q ss_pred CCEE-EEEcC-ChHHHHHHH-HHHHcCCCeEEEEcCChhhHHHHH----hcCCC-EEeCCCC-CCchHHHHHHhhc--CC
Q 022865 195 GSIV-AVFGL-GTVGLAVAE-GAKAAGASRVIGIDIDPKKFDRAK----NFGVT-EFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 195 g~~v-lI~G~-g~vG~~ai~-~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~-~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
|++| ||+|+ +++|++.++ +++..|+ +|+.+++++++++.+. +.+.. ..+..+- +.++..+.+.+.. .+
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~-~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcC
Confidence 6677 55687 999998765 5655677 9999999998876553 23332 2222221 1223332323222 24
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
++|++|++.|-
T Consensus 81 ~iDiLVnNAGi 91 (275)
T d1wmaa1 81 GLDVLVNNAGI 91 (275)
T ss_dssp SEEEEEECCCC
T ss_pred CcEEEEEcCCc
Confidence 79999999884
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.29 E-value=0.008 Score=45.60 Aligned_cols=89 Identities=21% Similarity=0.302 Sum_probs=58.9
Q ss_pred hhhhhcC-CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 185 AVWNTAK-VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 185 ~~~~~~~-~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
++.+... .-.|++++|+|-|.+|...++.++.+|+ +|++++..+-+.-.+.--|.. +. .+.+.+ .
T Consensus 13 ~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~-~V~v~e~dp~~al~A~~dG~~-v~-------~~~~a~-----~ 78 (163)
T d1li4a1 13 GIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGA-RVIITEIDPINALQAAMEGYE-VT-------TMDEAC-----Q 78 (163)
T ss_dssp HHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE-EC-------CHHHHT-----T
T ss_pred HHHHHhCceecCCEEEEeccccccHHHHHHHHhCCC-eeEeeecccchhHHhhcCceE-ee-------ehhhhh-----h
Confidence 3444433 4589999999999999999999999999 999999988664444433432 11 111111 1
Q ss_pred CccEEEEcCCChHH-HHHHHHHhhc
Q 022865 264 GVDYSFECIGNVSV-MRAALECCHK 287 (291)
Q Consensus 264 g~d~v~d~~g~~~~-~~~~~~~l~~ 287 (291)
..|+++-++|+... -...++.|++
T Consensus 79 ~adivvtaTGn~~vI~~eh~~~MKd 103 (163)
T d1li4a1 79 EGNIFVTTTGCIDIILGRHFEQMKD 103 (163)
T ss_dssp TCSEEEECSSCSCSBCHHHHTTCCT
T ss_pred hccEEEecCCCccchhHHHHHhccC
Confidence 47888988887542 2333444443
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.24 E-value=0.0099 Score=45.49 Aligned_cols=44 Identities=16% Similarity=0.134 Sum_probs=36.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
..++++|+|+|+|+.+.+++..+...+ .+|+.+.++.++.+.+.
T Consensus 15 ~~~~k~vlIlGaGGaarai~~aL~~~~-~~i~I~nR~~~~a~~l~ 58 (171)
T d1p77a1 15 LRPNQHVLILGAGGATKGVLLPLLQAQ-QNIVLANRTFSKTKELA 58 (171)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHHHTT-CEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHcccC-ceeeeccchHHHHHHHH
Confidence 347889999999999999988887655 59999999998866553
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=96.21 E-value=0.00039 Score=56.52 Aligned_cols=74 Identities=26% Similarity=0.312 Sum_probs=46.4
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCc----hHHHHHHh-hcCCCccEE
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDK----PIQQVLVD-LTDGGVDYS 268 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~----~~~~~v~~-~~~gg~d~v 268 (291)
+.+|||+|+ +++|.+.++.+...|+ +|+.+++++++... ....+..+.... ...+.+.. +..+++|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~-~V~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGY-TVLNIDLSANDQAD-----SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTE-EEEEEESSCCTTSS-----EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCchhccc-----ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 357899988 9999999999989999 89999888764211 111111111111 11222222 234589999
Q ss_pred EEcCCC
Q 022865 269 FECIGN 274 (291)
Q Consensus 269 ~d~~g~ 274 (291)
++++|.
T Consensus 76 innAG~ 81 (235)
T d1ooea_ 76 FCVAGG 81 (235)
T ss_dssp EECCCC
T ss_pred EECCcc
Confidence 999883
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.16 E-value=0.0057 Score=49.68 Aligned_cols=77 Identities=10% Similarity=0.204 Sum_probs=48.3
Q ss_pred CEEEEEcC-ChHHHHHHHHHH---HcCCCeEEEEcCChhhHHHHHh---cCCC-EEe--CCCCCCchHHHHHH---hhc-
Q 022865 196 SIVAVFGL-GTVGLAVAEGAK---AAGASRVIGIDIDPKKFDRAKN---FGVT-EFV--NPKDHDKPIQQVLV---DLT- 261 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~---~~g~~~v~~~~~~~~~~~~~~~---~ga~-~~i--~~~~~~~~~~~~v~---~~~- 261 (291)
++|||+|+ +++|++.++.+. ..|+ +|+.+.+++++++.+++ .+.. .++ |..+ .++..+.+. +..
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~-~~~v~~~~~~i~~~~~ 80 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQ-HLFTTCRNREQAKELEDLAKNHSNIHILEIDLRN-FDAYDKLVADIEGVTK 80 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCS-EEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTC-GGGHHHHHHHHHHHHG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHhcCCcEEEEEEEecc-HHHHHHHHhhhHHHhh
Confidence 58999988 999998775543 3477 89999999987655543 2222 222 2222 233333333 222
Q ss_pred CCCccEEEEcCCC
Q 022865 262 DGGVDYSFECIGN 274 (291)
Q Consensus 262 ~gg~d~v~d~~g~ 274 (291)
.+++|+++++.|.
T Consensus 81 ~~~iDiLvnNAg~ 93 (248)
T d1snya_ 81 DQGLNVLFNNAGI 93 (248)
T ss_dssp GGCCSEEEECCCC
T ss_pred cCCcceEEeeccc
Confidence 3479999998773
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=96.13 E-value=0.0057 Score=49.45 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=64.3
Q ss_pred hhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHH
Q 022865 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 185 ~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~ 258 (291)
.+....+++||++||=+|+|. |..+..+++..|+ +|+++|.+++-.+.+++ .|... .+...+ +.
T Consensus 24 ~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~-~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d--------~~ 93 (245)
T d1nkva_ 24 TLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGI-TGTGIDMSSLFTAQAKRRAEELGVSERVHFIHND--------AA 93 (245)
T ss_dssp HHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCC-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESC--------CT
T ss_pred HHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCC-EEEEEecccchhhHHHHHHHHhhccccchhhhhH--------Hh
Confidence 466788899999999999865 6677788888898 99999999987776654 35432 111111 11
Q ss_pred hhc-CCCccEEEEc-----C-CChHHHHHHHHHhhcc
Q 022865 259 DLT-DGGVDYSFEC-----I-GNVSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~-~gg~d~v~d~-----~-g~~~~~~~~~~~l~~~ 288 (291)
++. .+.||+|+-. . .-...++.+.+.|+++
T Consensus 94 ~~~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPG 130 (245)
T d1nkva_ 94 GYVANEKCDVAACVGATWIAGGFAGAEELLAQSLKPG 130 (245)
T ss_dssp TCCCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEE
T ss_pred hccccCceeEEEEEehhhccCCHHHHHHHHHHHcCcC
Confidence 122 3479988853 2 2356677888888888
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=96.04 E-value=0.0016 Score=52.54 Aligned_cols=93 Identities=13% Similarity=0.147 Sum_probs=58.4
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHc---CC---CeEEEEcCChhhHHHHHhc---------CCCEEeCCCCCCchHHH
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAA---GA---SRVIGIDIDPKKFDRAKNF---------GVTEFVNPKDHDKPIQQ 255 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~---g~---~~v~~~~~~~~~~~~~~~~---------ga~~~i~~~~~~~~~~~ 255 (291)
.++++++||.+|+|. |+.++.+++.. |. .+|++++..++-.+++++. +...+.....+...
T Consensus 77 ~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~--- 152 (223)
T d1r18a_ 77 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK--- 152 (223)
T ss_dssp TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG---
T ss_pred ccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccc---
Confidence 789999999998855 66666666654 32 2799999999877766431 11111111110000
Q ss_pred HHHhhcCCCccEEEEcCCChHHHHHHHHHhhccC
Q 022865 256 VLVDLTDGGVDYSFECIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 256 ~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~g 289 (291)
. ....+.||.|+-+.+-+......++.|+++|
T Consensus 153 ~--~~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG 184 (223)
T d1r18a_ 153 G--YPPNAPYNAIHVGAAAPDTPTELINQLASGG 184 (223)
T ss_dssp C--CGGGCSEEEEEECSCBSSCCHHHHHTEEEEE
T ss_pred c--cccccceeeEEEEeechhchHHHHHhcCCCc
Confidence 0 0112379988888776666677888899883
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.94 E-value=0.0012 Score=53.35 Aligned_cols=92 Identities=17% Similarity=0.185 Sum_probs=60.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE---EeCCCCCCchHHHHHHhhcCCCccEE-
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE---FVNPKDHDKPIQQVLVDLTDGGVDYS- 268 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~---~i~~~~~~~~~~~~v~~~~~gg~d~v- 268 (291)
.+|.+||-+|+|. |..+..+++..+. +|++++.+++-++.+++..... +.... .+.......+..+.||.+
T Consensus 52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~-~v~~id~s~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~fD~i~ 126 (229)
T d1zx0a1 52 SKGGRVLEVGFGM-AIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLK---GLWEDVAPTLPDGHFDGIL 126 (229)
T ss_dssp TTCEEEEEECCTT-SHHHHHHHTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEE---SCHHHHGGGSCTTCEEEEE
T ss_pred cCCCeEEEeeccc-hHHHHHHHHcCCC-eEEEeCCCHHHHHHHHHHhhhccccccccc---cccccccccccccccccee
Confidence 5788999999866 7788888876655 8999999999999887653221 11111 123333444555689977
Q ss_pred EEcCCC----------hHHHHHHHHHhhccC
Q 022865 269 FECIGN----------VSVMRAALECCHKVS 289 (291)
Q Consensus 269 ~d~~g~----------~~~~~~~~~~l~~~g 289 (291)
||.... +..++.+.+.|++||
T Consensus 127 fD~~~~~~~~~~~~~~~~~~~~~~r~LkpGG 157 (229)
T d1zx0a1 127 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 157 (229)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred ecccccccccccccCHHHHHHHHHHHcCCCc
Confidence 465432 234666788899883
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.92 E-value=0.013 Score=48.80 Aligned_cols=96 Identities=15% Similarity=0.217 Sum_probs=65.8
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
+.+..++++|++||=+|+|- |..+..+|+..|+ +|++++.+++..+.++ +.|....+.... .+. ...
T Consensus 53 ~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~-~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~--~d~-----~~~ 123 (291)
T d1kpia_ 53 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDV-NVIGLTLSENQYAHDKAMFDEVDSPRRKEVRI--QGW-----EEF 123 (291)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHSCCSSCEEEEE--CCG-----GGC
T ss_pred HHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCc-ceeeccchHHHHHHHHHHHHhhccchhhhhhh--hcc-----ccc
Confidence 56888999999999999864 4467788888999 9999999998766553 345433221111 011 122
Q ss_pred CCCccEEEE-----cCCC----------hHHHHHHHHHhhccCCC
Q 022865 262 DGGVDYSFE-----CIGN----------VSVMRAALECCHKVSGT 291 (291)
Q Consensus 262 ~gg~d~v~d-----~~g~----------~~~~~~~~~~l~~~gg~ 291 (291)
.+.||.|+. .+++ +..++.+.++|+|+ |+
T Consensus 124 ~~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~Lkpg-G~ 167 (291)
T d1kpia_ 124 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDD-GR 167 (291)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTT-CE
T ss_pred ccccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCC-Cc
Confidence 457997765 4443 35688899999998 53
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.89 E-value=0.034 Score=41.72 Aligned_cols=43 Identities=23% Similarity=0.376 Sum_probs=37.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
+|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+++.++
T Consensus 2 kIgiIGlG~MG~~~A~~L~~~G~-~V~~~d~~~~~~~~~~~~~~ 44 (161)
T d1vpda2 2 KVGFIGLGIMGKPMSKNLLKAGY-SLVVSDRNPEAIADVIAAGA 44 (161)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTC
T ss_pred EEEEEehhHHHHHHHHHHHHCCC-eEEEEeCCcchhHHHHHhhh
Confidence 47889999999988877778899 89999999999988887765
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.89 E-value=0.0044 Score=51.73 Aligned_cols=93 Identities=15% Similarity=0.184 Sum_probs=64.6
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCE--EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTE--FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~--~i~~~~~~~~~~~~v~~ 259 (291)
+.+..++++|++||=+|+|- |..++.+|+..|+ +|++++.+++..+.+++. |... .+...+ + ..
T Consensus 54 ~~~~l~l~~G~~VLDiGCG~-G~~a~~~a~~~g~-~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d----~----~~ 123 (285)
T d1kpga_ 54 ALGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAG----W----EQ 123 (285)
T ss_dssp HHTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESC----G----GG
T ss_pred HHHHcCCCCCCEEEEecCcc-hHHHHHHHhcCCc-ceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhh----h----hc
Confidence 56788999999999999865 6778889999999 999999999888777542 2211 111111 1 11
Q ss_pred hcCCCccEEEE-----cCCC---hHHHHHHHHHhhccCC
Q 022865 260 LTDGGVDYSFE-----CIGN---VSVMRAALECCHKVSG 290 (291)
Q Consensus 260 ~~~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~gg 290 (291)
..+.+|.|+. .++. ...++.+.+.|+++ |
T Consensus 124 -~~~~fD~i~si~~~eh~~~~~~~~~~~~~~r~Lkpg-G 160 (285)
T d1kpga_ 124 -FDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPAD-G 160 (285)
T ss_dssp -CCCCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTT-C
T ss_pred -ccccccceeeehhhhhcCchhHHHHHHHHHhhcCCC-C
Confidence 1346886654 4443 35688888899998 5
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.89 E-value=0.0026 Score=53.04 Aligned_cols=96 Identities=13% Similarity=0.168 Sum_probs=64.1
Q ss_pred hhhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh
Q 022865 185 AVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 185 ~~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
.+.+..++++|++||=+|+|. |..+..+++..|+ +|++++.+++..+.+++ .|....+.... .+. ..
T Consensus 43 ~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~-~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~--~d~-----~~ 113 (280)
T d2fk8a1 43 LNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLL--QGW-----ED 113 (280)
T ss_dssp HHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEE--SCG-----GG
T ss_pred HHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCce-eEEEecchHHHHHHHHHHHHhhccccchhhhh--hhh-----hh
Confidence 366788899999999999865 4456778888898 99999999998877754 33321111110 010 11
Q ss_pred cCCCccEEEE-----cCCC---hHHHHHHHHHhhccC
Q 022865 261 TDGGVDYSFE-----CIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 261 ~~gg~d~v~d-----~~g~---~~~~~~~~~~l~~~g 289 (291)
..+.||.|+. .++. +..++...+.|+++|
T Consensus 114 ~~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG 150 (280)
T d2fk8a1 114 FAEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADG 150 (280)
T ss_dssp CCCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTC
T ss_pred hccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCc
Confidence 2347887754 4443 355788889999993
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=95.78 E-value=0.024 Score=45.87 Aligned_cols=80 Identities=19% Similarity=0.231 Sum_probs=51.9
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCC-CCchHHHHHHhhc--CC
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKD-HDKPIQQVLVDLT--DG 263 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~-~~~~~~~~v~~~~--~g 263 (291)
+|+++||+|+ + ++|.+.+..+...|+ +|+.++++++..+.+.+ .+....+..+. +..+..+.+.... .+
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~-~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGA-ELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 6899999987 5 688888888889999 89988888776655433 34333333222 1223333333322 23
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
..|+.+++++.
T Consensus 83 ~~d~~v~~a~~ 93 (258)
T d1qsga_ 83 KFDGFVHSIGF 93 (258)
T ss_dssp SEEEEEECCCC
T ss_pred ccceEEEeecc
Confidence 78999988764
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=95.78 E-value=0.0045 Score=42.36 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=32.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
++++|+|+|.|..|+++++++...|+ +|++.|..+.
T Consensus 4 ~~K~v~ViGlG~sG~s~a~~L~~~g~-~v~~~D~~~~ 39 (93)
T d2jfga1 4 QGKNVVIIGLGLTGLSCVDFFLARGV-TPRVMDTRMT 39 (93)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-CCEEEESSSS
T ss_pred CCCEEEEEeECHHHHHHHHHHHHCCC-EEEEeeCCcC
Confidence 46789999999999999999999999 8999988654
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=95.73 E-value=0.011 Score=48.04 Aligned_cols=77 Identities=18% Similarity=0.259 Sum_probs=48.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEE-cCChhhHHHH----HhcCCCE-Ee--CCCCCCchHHHHHHhhc--CCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGI-DIDPKKFDRA----KNFGVTE-FV--NPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~-~~~~~~~~~~----~~~ga~~-~i--~~~~~~~~~~~~v~~~~--~gg 264 (291)
..+||.|+ +++|++.++.+...|+ +|+.. .+++++++.+ +++|.+. .+ |..+ .++..+.+.+.. .++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga-~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~-~~~v~~~~~~~~~~~g~ 79 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGC-KVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK-EADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTS-HHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCC-HHHHHHHHHHHHHHcCC
Confidence 36788887 9999999988889999 77765 4555554443 3455432 22 2222 233333333322 248
Q ss_pred ccEEEEcCCC
Q 022865 265 VDYSFECIGN 274 (291)
Q Consensus 265 ~d~v~d~~g~ 274 (291)
+|+++++.|.
T Consensus 80 iDiLVnnAg~ 89 (244)
T d1edoa_ 80 IDVVVNNAGI 89 (244)
T ss_dssp CSEEEECCCC
T ss_pred CCcccccccc
Confidence 9999999884
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.69 E-value=0.012 Score=46.23 Aligned_cols=47 Identities=38% Similarity=0.489 Sum_probs=43.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT 241 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~ 241 (291)
.|.+|+|.|-|.+|..+++++...|+ +|++.+.+.++.+....++++
T Consensus 26 ~gk~v~IqG~G~VG~~~A~~L~~~Ga-kvvv~d~d~~~~~~~~~~g~~ 72 (201)
T d1c1da1 26 DGLTVLVQGLGAVGGSLASLAAEAGA-QLLVADTDTERVAHAVALGHT 72 (201)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEecchHHHHHHHHhhccc
Confidence 67899999999999999999999999 999999999999888888764
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=95.68 E-value=0.011 Score=47.79 Aligned_cols=77 Identities=14% Similarity=0.191 Sum_probs=49.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCC------eEEEEcCChhhHHHHH----hcCCCE-Ee--CCCCCCchHHHHHHhhc-
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGAS------RVIGIDIDPKKFDRAK----NFGVTE-FV--NPKDHDKPIQQVLVDLT- 261 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~------~v~~~~~~~~~~~~~~----~~ga~~-~i--~~~~~~~~~~~~v~~~~- 261 (291)
.|||+|+ +++|++.+..+...|++ .|+..++++++++.+. +.|... .+ |..+ .++..+.+.+..
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~-~~~v~~~~~~~~~ 81 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISD-MADVRRLTTHIVE 81 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTS-HHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCC-HHHHHHHHHHHHH
Confidence 4678887 99999988888788883 3888989988876553 334332 22 2222 233333333322
Q ss_pred -CCCccEEEEcCCC
Q 022865 262 -DGGVDYSFECIGN 274 (291)
Q Consensus 262 -~gg~d~v~d~~g~ 274 (291)
.|++|+++++.|.
T Consensus 82 ~~g~iDilvnnAg~ 95 (240)
T d2bd0a1 82 RYGHIDCLVNNAGV 95 (240)
T ss_dssp HTSCCSEEEECCCC
T ss_pred HcCCcceeeccccc
Confidence 2479999999884
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=95.55 E-value=0.013 Score=46.61 Aligned_cols=88 Identities=16% Similarity=0.134 Sum_probs=63.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
..++.+||=+|+|. |..+..+++ .|+ +|+++|.+++-++.+++-+....+..+.. ++ .+.++.||+|+..
T Consensus 40 ~~~~~~vLDiGcG~-G~~~~~l~~-~~~-~v~giD~s~~~l~~a~~~~~~~~~~~~~~--~l-----~~~~~~fD~ii~~ 109 (246)
T d2avna1 40 LKNPCRVLDLGGGT-GKWSLFLQE-RGF-EVVLVDPSKEMLEVAREKGVKNVVEAKAE--DL-----PFPSGAFEAVLAL 109 (246)
T ss_dssp CCSCCEEEEETCTT-CHHHHHHHT-TTC-EEEEEESCHHHHHHHHHHTCSCEEECCTT--SC-----CSCTTCEEEEEEC
T ss_pred cCCCCEEEEECCCC-chhcccccc-cce-EEEEeeccccccccccccccccccccccc--cc-----ccccccccceeee
Confidence 45677888889875 888888876 588 89999999999999998776655544331 11 1223579998864
Q ss_pred CC-------ChHHHHHHHHHhhccC
Q 022865 272 IG-------NVSVMRAALECCHKVS 289 (291)
Q Consensus 272 ~g-------~~~~~~~~~~~l~~~g 289 (291)
.. ....++...+.|++||
T Consensus 110 ~~~~~~~~d~~~~l~~i~r~Lk~gG 134 (246)
T d2avna1 110 GDVLSYVENKDKAFSEIRRVLVPDG 134 (246)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEE
T ss_pred cchhhhhhhHHHHHHHHHhhcCcCc
Confidence 33 2345677888899883
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.48 E-value=0.0064 Score=46.84 Aligned_cols=36 Identities=17% Similarity=0.218 Sum_probs=31.8
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
+++|+|+|+|+.|+.++..++..|++.|+++++.+.
T Consensus 4 ~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 578999999999999999999999966888887764
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=95.40 E-value=0.0027 Score=47.94 Aligned_cols=83 Identities=14% Similarity=0.111 Sum_probs=50.3
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEE-eCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEF-VNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~-i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|+|+|+|.+|.+.+..+...|. .|..+++++++.+.....+.+.. ..... ..+..+.+ +.+|++|-++...
T Consensus 2 kI~IiGaG~iG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-----~~~D~iii~vka~ 74 (167)
T d1ks9a2 2 KITVLGCGALGQLWLTALCKQGH-EVQGWLRVPQPYCSVNLVETDGSIFNESL-TANDPDFL-----ATSDLLLVTLKAW 74 (167)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCSEEEEEEECTTSCEEEEEE-EESCHHHH-----HTCSEEEECSCGG
T ss_pred EEEEECcCHHHHHHHHHHHHCCC-ceEEEEcCHHHhhhhccccCCcccccccc-ccchhhhh-----cccceEEEeeccc
Confidence 68999999999888877778898 89999888765432222221110 00000 00111111 2589999999886
Q ss_pred HHHHHHHHHhhc
Q 022865 276 SVMRAALECCHK 287 (291)
Q Consensus 276 ~~~~~~~~~l~~ 287 (291)
. ...+++.+++
T Consensus 75 ~-~~~~~~~l~~ 85 (167)
T d1ks9a2 75 Q-VSDAVKSLAS 85 (167)
T ss_dssp G-HHHHHHHHHT
T ss_pred c-hHHHHHhhcc
Confidence 5 5566655543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.38 E-value=0.013 Score=47.41 Aligned_cols=47 Identities=26% Similarity=0.354 Sum_probs=39.3
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVT 241 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~ 241 (291)
+|+++||+|+ +++|.+.++.+...|+ +|+.+++++++++.+ ++++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGA-SAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHhCCC
Confidence 6899999987 9999999999999999 899999988876555 456554
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=95.37 E-value=0.012 Score=45.57 Aligned_cols=84 Identities=19% Similarity=0.255 Sum_probs=51.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---CEEeCCCCCCchHHH-HHHhhc-----C--CC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---TEFVNPKDHDKPIQQ-VLVDLT-----D--GG 264 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---~~~i~~~~~~~~~~~-~v~~~~-----~--gg 264 (291)
++|.|+|+|.+|...++++...|+ +|+..|.+++.++.+.+.-. +..+......+...+ .+..+. . ..
T Consensus 5 ~~vaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 83 (186)
T d1wdka3 5 KQAAVLGAGIMGGGIAYQSASKGT-PILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGN 83 (186)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSSTTGGG
T ss_pred CEEEEECcCHHHHHHHHHHHhCCC-eEEEEECCHHHHhhhhhhhhhhHHhhhcccccchhhhhhhhceeecccccccccc
Confidence 579999999999988888888899 89999999987765533211 001111111122222 222211 1 16
Q ss_pred ccEEEEcCCChHHHHH
Q 022865 265 VDYSFECIGNVSVMRA 280 (291)
Q Consensus 265 ~d~v~d~~g~~~~~~~ 280 (291)
+|+|++++.....++.
T Consensus 84 adlViEav~E~l~~K~ 99 (186)
T d1wdka3 84 VDLVVEAVVENPKVKQ 99 (186)
T ss_dssp CSEEEECCCSCHHHHH
T ss_pred cceeeeeecchHHHHH
Confidence 8999999987654443
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=95.34 E-value=0.025 Score=45.88 Aligned_cols=81 Identities=14% Similarity=0.241 Sum_probs=51.8
Q ss_pred CCCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhhH-H-HHHhcCCCE-Ee--CCCCC--CchHHHHHHhhcC
Q 022865 193 EPGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKKF-D-RAKNFGVTE-FV--NPKDH--DKPIQQVLVDLTD 262 (291)
Q Consensus 193 ~~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~-~~~~~ga~~-~i--~~~~~--~~~~~~~v~~~~~ 262 (291)
-+|+++||+|+ | ++|.+.++-+...|+ +|+.+.++++++ + ..++++... .+ +..+. ..+..+.+.+...
T Consensus 4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga-~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 4 LDGKRILVSGIITDSSIAFHIARVAQEQGA-QLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTCEEEECCCSSTTCHHHHHHHHHHHTTC-EEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHcCC-EEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 46889999985 3 599998888889999 898888887765 3 234455422 11 22211 0233344444332
Q ss_pred --CCccEEEEcCCC
Q 022865 263 --GGVDYSFECIGN 274 (291)
Q Consensus 263 --gg~d~v~d~~g~ 274 (291)
+.+|+++++.|.
T Consensus 83 ~~~~ld~~i~~ag~ 96 (268)
T d2h7ma1 83 AGNKLDGVVHSIGF 96 (268)
T ss_dssp TTCCEEEEEECCCC
T ss_pred cCCCcceeeecccc
Confidence 378999999883
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=95.33 E-value=0.026 Score=40.34 Aligned_cols=38 Identities=32% Similarity=0.588 Sum_probs=33.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
+.++++++|+|+|.+|.-.+..++.+|. +|+.+++.+.
T Consensus 27 ~~~~~~vvIIGgG~iG~E~A~~l~~~g~-~Vtli~~~~~ 64 (121)
T d1d7ya2 27 LRPQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPR 64 (121)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred hhcCCeEEEECcchhHHHHHHHhhcccc-eEEEEeeccc
Confidence 4677899999999999999999999998 8999877764
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.30 E-value=0.055 Score=36.96 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=50.1
Q ss_pred CCCCCEEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEE
Q 022865 192 VEPGSIVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~a-i~~a~~~g~~~v~~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~ 269 (291)
.+..+++.++|.|++|..+ +++++..|+ .|.+.|..+ ...+.+++.|......... .. + .++|+|+
T Consensus 5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~-~VsGSD~~~~~~~~~L~~~Gi~v~~g~~~--~~----i-----~~~d~vV 72 (96)
T d1p3da1 5 MRRVQQIHFIGIGGAGMSGIAEILLNEGY-QISGSDIADGVVTQRLAQAGAKIYIGHAE--EH----I-----EGASVVV 72 (96)
T ss_dssp CTTCCEEEEETTTSTTHHHHHHHHHHHTC-EEEEEESCCSHHHHHHHHTTCEEEESCCG--GG----G-----TTCSEEE
T ss_pred chhCCEEEEEEECHHHHHHHHHHHHhCCC-EEEEEeCCCChhhhHHHHCCCeEEECCcc--cc----C-----CCCCEEE
Confidence 4556789999999999777 899999999 999999864 3455666788854443322 11 1 2578887
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
=+.+-
T Consensus 73 ~S~AI 77 (96)
T d1p3da1 73 VSSAI 77 (96)
T ss_dssp ECTTS
T ss_pred ECCCc
Confidence 76653
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=95.30 E-value=0.012 Score=47.05 Aligned_cols=94 Identities=17% Similarity=0.177 Sum_probs=62.7
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~~ 259 (291)
+....+++||++||=+|+|. |..+..+++. +. +|+++|.+++-++.+++ .+.+. .+..+. .++ .
T Consensus 8 l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~-~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~--~~~-----~ 77 (234)
T d1xxla_ 8 MIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTA--ESL-----P 77 (234)
T ss_dssp HHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBT--TBC-----C
T ss_pred HHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CC-eEEEEeCChhhhhhhhhhhccccccccccccccc--ccc-----c
Confidence 56788999999999999876 7777788764 55 89999999987776643 33321 121111 110 1
Q ss_pred hcCCCccEEEEcCC------ChHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFECIG------NVSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~~g------~~~~~~~~~~~l~~~g 289 (291)
+.++.||+|+.+-. -...++.+.+.|+++|
T Consensus 78 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG 113 (234)
T d1xxla_ 78 FPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDG 113 (234)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred ccccccceeeeeceeecccCHHHHHHHHHHeeCCCc
Confidence 22347998886422 2455888888889883
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.29 E-value=0.023 Score=42.85 Aligned_cols=83 Identities=31% Similarity=0.416 Sum_probs=57.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
.-.|++++|.|=|-+|.-.++-+|.+|+ +|++++.++-+.=.+.--|.. +. +..+.+ ...|+++-+
T Consensus 20 ~laGk~vvV~GYG~vGrG~A~~~rg~Ga-~V~V~E~DPi~alqA~mdGf~-v~-------~~~~a~-----~~aDi~vTa 85 (163)
T d1v8ba1 20 LISGKIVVICGYGDVGKGCASSMKGLGA-RVYITEIDPICAIQAVMEGFN-VV-------TLDEIV-----DKGDFFITC 85 (163)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSCHHHHHHHHTTTCE-EC-------CHHHHT-----TTCSEEEEC
T ss_pred eecCCEEEEecccccchhHHHHHHhCCC-EEEEEecCchhhHHHHhcCCc-cC-------chhHcc-----ccCcEEEEc
Confidence 4689999999999999999999999999 999999998654333222321 11 111122 247999999
Q ss_pred CCChHH-HHHHHHHhhcc
Q 022865 272 IGNVSV-MRAALECCHKV 288 (291)
Q Consensus 272 ~g~~~~-~~~~~~~l~~~ 288 (291)
+|+... -...++.|+++
T Consensus 86 TGn~~vI~~~h~~~MKdg 103 (163)
T d1v8ba1 86 TGNVDVIKLEHLLKMKNN 103 (163)
T ss_dssp CSSSSSBCHHHHTTCCTT
T ss_pred CCCCccccHHHHHHhhCC
Confidence 998653 33445555543
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.25 E-value=0.067 Score=40.07 Aligned_cols=79 Identities=22% Similarity=0.326 Sum_probs=49.9
Q ss_pred CEEEEEcCChHHH-HHHHHHHHcCCCeEEEE-cCCh--hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhc-CCCccEEEE
Q 022865 196 SIVAVFGLGTVGL-AVAEGAKAAGASRVIGI-DIDP--KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLT-DGGVDYSFE 270 (291)
Q Consensus 196 ~~vlI~G~g~vG~-~ai~~a~~~g~~~v~~~-~~~~--~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~-~gg~d~v~d 270 (291)
-++.|+|+|.+|. ..+++++......++++ +++. .++++++++|...... . .+.+.+.. ..++|+||.
T Consensus 5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~~i~~~~~------~-~d~l~~~~~~~~iDiVf~ 77 (157)
T d1nvmb1 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYA------G-VEGLIKLPEFADIDFVFD 77 (157)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEESS------H-HHHHHHSGGGGGEEEEEE
T ss_pred cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhcCCccccc------c-eeeeeecccccccCEEEE
Confidence 3789999999987 46678777654467776 4443 3457788888754321 1 22333322 237999999
Q ss_pred cCCChHHHHHH
Q 022865 271 CIGNVSVMRAA 281 (291)
Q Consensus 271 ~~g~~~~~~~~ 281 (291)
+++.......+
T Consensus 78 ATpag~h~~~~ 88 (157)
T d1nvmb1 78 ATSASAHVQNE 88 (157)
T ss_dssp CSCHHHHHHHH
T ss_pred cCCchhHHHhH
Confidence 99875545444
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=95.18 E-value=0.04 Score=44.82 Aligned_cols=87 Identities=22% Similarity=0.313 Sum_probs=56.4
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcCCCccE
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
.+++++||=+|+|. |..++.++ .+|+ +|+++|.+++-.+.+++ .+....+.. .+..+ ....+.||+
T Consensus 118 ~~~g~~VLDiGcGs-G~l~i~aa-~~g~-~V~gvDis~~av~~A~~na~~n~~~~~~~~----~d~~~---~~~~~~fD~ 187 (254)
T d2nxca1 118 LRPGDKVLDLGTGS-GVLAIAAE-KLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLE----GSLEA---ALPFGPFDL 187 (254)
T ss_dssp CCTTCEEEEETCTT-SHHHHHHH-HTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEE----SCHHH---HGGGCCEEE
T ss_pred cCccCEEEEcccch-hHHHHHHH-hcCC-EEEEEECChHHHHHHHHHHHHcCCceeEEe----ccccc---cccccccch
Confidence 57899999899865 66776655 4687 89999999998887764 343322211 11211 122348999
Q ss_pred EEEcCCC---hHHHHHHHHHhhcc
Q 022865 268 SFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 268 v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
|+-.... ...++...+.|+++
T Consensus 188 V~ani~~~~l~~l~~~~~~~LkpG 211 (254)
T d2nxca1 188 LVANLYAELHAALAPRYREALVPG 211 (254)
T ss_dssp EEEECCHHHHHHHHHHHHHHEEEE
T ss_pred hhhccccccHHHHHHHHHHhcCCC
Confidence 9875443 23355666778887
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=95.18 E-value=0.047 Score=44.01 Aligned_cols=34 Identities=18% Similarity=0.174 Sum_probs=29.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
+.||+|+ +++|.+.++.+...|+ +|+.++++.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~-~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGF-RVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCchH
Confidence 5688887 9999999999999999 99999887654
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=95.15 E-value=0.069 Score=39.68 Aligned_cols=92 Identities=21% Similarity=0.232 Sum_probs=63.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHc--CCCeEEEEcCChhh---HHHHHhcCCCEEeCCCCCCc---------------hHH
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAA--GASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHDK---------------PIQ 254 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~--g~~~v~~~~~~~~~---~~~~~~~ga~~~i~~~~~~~---------------~~~ 254 (291)
++|.|+|+ |.+|..+.++.+.. .+ +|+++.....- .+.+++|....++..+.... ...
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~ 81 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRY-QVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGA 81 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGE-EEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESH
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCc-EEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCc
Confidence 78999998 99999999999986 46 78877666543 35557788877654433110 011
Q ss_pred HHHHhhcCCCccEEEEcCCChHHHHHHHHHhhcc
Q 022865 255 QVLVDLTDGGVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 255 ~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+.+.+.....+|+|+.++.+-..+...+.+++.+
T Consensus 82 ~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~g 115 (150)
T d1r0ka2 82 DALVEAAMMGADWTMAAIIGCAGLKATLAAIRKG 115 (150)
T ss_dssp HHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTT
T ss_pred cchheecccccceeeeecCchhHHHHHHHHHhcC
Confidence 2223332336899999988878888888888764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=95.11 E-value=0.013 Score=45.19 Aligned_cols=38 Identities=34% Similarity=0.369 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
....+++|+|+|+|+.|+.|+..+..+|+ +|+.++..+
T Consensus 39 ~~~~~k~V~IIGaGPAGL~AA~~la~~G~-~Vtl~E~~~ 76 (179)
T d1ps9a3 39 PAVQKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHS 76 (179)
T ss_dssp SCSSCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSS
T ss_pred CCCCCcEEEEECccHHHHHHHHHHHhhcc-ceEEEeccC
Confidence 34556899999999999999999999999 999998865
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.10 E-value=0.036 Score=43.30 Aligned_cols=73 Identities=15% Similarity=0.110 Sum_probs=45.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
.||||+|+ |.+|...+..+...|.. +|+.+.+++++.+.... +.. .+..+..+. +.+.+... ++|.|+.+.+
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~-~~~-~~~~d~~~~---~~~~~~~~-~~d~vi~~a~ 77 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGG-EAD-VFIGDITDA---DSINPAFQ-GIDALVILTS 77 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTC-CTT-EEECCTTSH---HHHHHHHT-TCSEEEECCC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccC-CcE-EEEeeeccc---cccccccc-cceeeEEEEe
Confidence 58999997 99999999999888863 56667777776554322 222 222221112 22222222 5899999876
Q ss_pred C
Q 022865 274 N 274 (291)
Q Consensus 274 ~ 274 (291)
.
T Consensus 78 ~ 78 (252)
T d2q46a1 78 A 78 (252)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.06 E-value=0.11 Score=38.25 Aligned_cols=45 Identities=29% Similarity=0.370 Sum_probs=33.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGVT 241 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga~ 241 (291)
+|.++|+|.+|.+.+.-+...|..+|++.++++++++.+. ++|..
T Consensus 2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~ 47 (152)
T d1yqga2 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE 47 (152)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc
Confidence 5788999999997776433345349999999999887765 46653
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=94.92 E-value=0.014 Score=44.75 Aligned_cols=49 Identities=22% Similarity=0.315 Sum_probs=41.2
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF 238 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ 238 (291)
+....+.|+.+||.+|+|. |..++.+|+ .|+ +|+++|.+++-++.+++.
T Consensus 13 ~~~l~~~~~~rvLd~GCG~-G~~a~~la~-~G~-~V~gvD~S~~~i~~a~~~ 61 (201)
T d1pjza_ 13 WSSLNVVPGARVLVPLCGK-SQDMSWLSG-QGY-HVVGAELSEAAVERYFTE 61 (201)
T ss_dssp HHHHCCCTTCEEEETTTCC-SHHHHHHHH-HCC-EEEEEEECHHHHHHHHHH
T ss_pred HHHcCCCCCCEEEEecCcC-CHHHHHHHH-cCC-ceEeecccHHHHHHHHHH
Confidence 4556788999999999876 778888886 488 999999999999888763
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.89 E-value=0.039 Score=45.77 Aligned_cols=92 Identities=17% Similarity=0.117 Sum_probs=62.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------CEEeCCCCCCchHHHHHHhhcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---------~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
...++|||+|.|. |..+-.+++..+.++|+.++-+++-.+.++++-. ..-+.. .+..+.+.+...+
T Consensus 79 ~~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~----~Da~~~l~~~~~~ 153 (290)
T d1xj5a_ 79 PNPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVI----GDGVAFLKNAAEG 153 (290)
T ss_dssp SCCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEE----SCHHHHHHTSCTT
T ss_pred CCCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEE----ccHHHHHhhcccc
Confidence 3457999998755 5566677887787799999999999999987531 111111 1344556655445
Q ss_pred CccEEE-EcCC---------ChHHHHHHHHHhhccC
Q 022865 264 GVDYSF-ECIG---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~-d~~g---------~~~~~~~~~~~l~~~g 289 (291)
.+|+|| |+.. +.+.++.+.++|+++|
T Consensus 154 ~yDvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~G 189 (290)
T d1xj5a_ 154 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGG 189 (290)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEE
T ss_pred CccEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCc
Confidence 899655 4433 3456888888888884
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.86 E-value=0.036 Score=43.65 Aligned_cols=97 Identities=12% Similarity=0.038 Sum_probs=62.4
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....++||++||=+|+|. |..+..+++..+-.+|+++|.+++.++.+++ .+....+..+...... ......
T Consensus 50 ~~l~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~----~~~~~~ 124 (209)
T d1nt2a_ 50 HRLKLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWK----YSGIVE 124 (209)
T ss_dssp CCCCCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGG----TTTTCC
T ss_pred ccCCCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccc----cccccc
Confidence 346789999999999876 7788888888876699999999987776643 3333333333211111 011112
Q ss_pred CccEEEEcCCCh----HHHHHHHHHhhccC
Q 022865 264 GVDYSFECIGNV----SVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~d~~g~~----~~~~~~~~~l~~~g 289 (291)
.+|+++...... ..+..+.+.|+++|
T Consensus 125 ~vd~v~~~~~~~~~~~~~l~~~~~~LkpgG 154 (209)
T d1nt2a_ 125 KVDLIYQDIAQKNQIEILKANAEFFLKEKG 154 (209)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEE
T ss_pred eEEEEEecccChhhHHHHHHHHHHHhccCC
Confidence 577887655432 34666677888883
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.82 E-value=0.11 Score=38.74 Aligned_cols=44 Identities=25% Similarity=0.305 Sum_probs=37.4
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.+|.++|.|.+|...+.-+...|+ .|++.++++++.+.+.+.++
T Consensus 2 ~kIg~IGlG~MG~~iA~~L~~~g~-~v~~~d~~~~~~~~~~~~~~ 45 (162)
T d3cuma2 2 KQIAFIGLGHMGAPMATNLLKAGY-LLNVFDLVQSAVDGLVAAGA 45 (162)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTC-EEEEECSSHHHHHHHHHTTC
T ss_pred CEEEEEEEHHHHHHHHHHHHHCCC-eEEEEECchhhhhhhhhhhc
Confidence 368899999999987777777899 99999999999888877765
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.77 E-value=0.12 Score=43.31 Aligned_cols=50 Identities=18% Similarity=0.236 Sum_probs=42.7
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
+....++++++++|=+|+|. |..+.++|+..++.++++++.+++..++++
T Consensus 143 ~~~~~~l~~~~~vlD~GcG~-G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~ 192 (328)
T d1nw3a_ 143 MIDEIKMTDDDLFVDLGSGV-GQVVLQVAAATNCKHHYGVEKADIPAKYAE 192 (328)
T ss_dssp HHHHSCCCTTCEEEEETCTT-SHHHHHHHHHCCCSEEEEEECSHHHHHHHH
T ss_pred HHHHcCCCCCCEEEEcCCCC-CHHHHHHHHHhCCCeEEEEeCCHHHHHHHH
Confidence 56778899999988888866 888899999999888999999998777664
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=94.72 E-value=0.015 Score=47.15 Aligned_cols=34 Identities=35% Similarity=0.400 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+++|+|+|+|..|+.++..++..|+ +|++++.++
T Consensus 1 ~KkV~IIGaG~aGL~aA~~La~~G~-~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGAGVSGLAAAYKLKIHGL-NVTVFEAEG 34 (373)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSC-EEEEECSSS
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 5789999999999999999999999 899998754
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=94.69 E-value=0.083 Score=39.61 Aligned_cols=82 Identities=18% Similarity=0.139 Sum_probs=54.7
Q ss_pred EEEEEcCChHHHH-HHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLA-VAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~-ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|.|+|+|.+|.. .+...+..+--.+++++.++++.+.+ ++++....+. + +.+.+ + ..+|+|+-|+.+
T Consensus 3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~----~~~ll-~---~~iD~V~I~tp~ 72 (167)
T d1xeaa1 3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT--D----YRDVL-Q---YGVDAVMIHAAT 72 (167)
T ss_dssp EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS--S----TTGGG-G---GCCSEEEECSCG
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc--c----HHHhc-c---cccceecccccc
Confidence 6889999999854 55555555332677888888776555 4577654322 1 11112 1 258999999998
Q ss_pred hHHHHHHHHHhhcc
Q 022865 275 VSVMRAALECCHKV 288 (291)
Q Consensus 275 ~~~~~~~~~~l~~~ 288 (291)
......+.+++..+
T Consensus 73 ~~H~~~~~~al~~g 86 (167)
T d1xeaa1 73 DVHSTLAAFFLHLG 86 (167)
T ss_dssp GGHHHHHHHHHHTT
T ss_pred cccccccccccccc
Confidence 88888888888654
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=94.66 E-value=0.038 Score=39.15 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=36.3
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.+.....++++|+|+|+|.+|+-.++.++.+|. .|+.+.+.+.
T Consensus 14 ~~~l~~~~~~~vvVvGgG~ig~E~A~~l~~~g~-~vt~i~~~~~ 56 (121)
T d1mo9a2 14 VEELDYEPGSTVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTEP 56 (121)
T ss_dssp HHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCT
T ss_pred HHHHhhCCCCEEEEECCCHHHHHHHHHHHhcch-hheEeeccch
Confidence 345566788999999999999999999999998 8888887654
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=94.61 E-value=0.025 Score=43.49 Aligned_cols=94 Identities=17% Similarity=0.138 Sum_probs=58.3
Q ss_pred hhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC-EEeCCCCCCchHHHHHHhhc
Q 022865 187 WNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 187 ~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~-~~i~~~~~~~~~~~~v~~~~ 261 (291)
.....++++++||=+|+|. |..++.+|+. +. +|+++|.+++.++.+++ +|.. .+-... .+..+....
T Consensus 26 l~~l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~-~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~---gda~~~~~~-- 97 (186)
T d1l3ia_ 26 MCLAEPGKNDVAVDVGCGT-GGVTLELAGR-VR-RVYAIDRNPEAISTTEMNLQRHGLGDNVTLME---GDAPEALCK-- 97 (186)
T ss_dssp HHHHCCCTTCEEEEESCTT-SHHHHHHHTT-SS-EEEEEESCHHHHHHHHHHHHHTTCCTTEEEEE---SCHHHHHTT--
T ss_pred HHhcCCCCCCEEEEEECCe-Eccccccccc-ce-EEEEecCCHHHHHHHHHHHHHcCCCcceEEEE---Cchhhcccc--
Confidence 3456788999998888754 5556666654 44 89999999998887754 4542 211111 122222211
Q ss_pred CCCccEEEEcCCC---hHHHHHHHHHhhcc
Q 022865 262 DGGVDYSFECIGN---VSVMRAALECCHKV 288 (291)
Q Consensus 262 ~gg~d~v~d~~g~---~~~~~~~~~~l~~~ 288 (291)
...+|.||-..+. ...++.+.+.|+++
T Consensus 98 ~~~~D~v~~~~~~~~~~~~~~~~~~~Lkpg 127 (186)
T d1l3ia_ 98 IPDIDIAVVGGSGGELQEILRIIKDKLKPG 127 (186)
T ss_dssp SCCEEEEEESCCTTCHHHHHHHHHHTEEEE
T ss_pred cCCcCEEEEeCccccchHHHHHHHHHhCcC
Confidence 2379988765432 34577777778887
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.60 E-value=0.17 Score=37.04 Aligned_cols=85 Identities=11% Similarity=-0.006 Sum_probs=58.1
Q ss_pred CEEEEEc-CChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-C-ccEEEEcC
Q 022865 196 SIVAVFG-LGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-G-VDYSFECI 272 (291)
Q Consensus 196 ~~vlI~G-~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g-~d~v~d~~ 272 (291)
++|.|+| .|.+|...+..++..|+ .|.+.+++++........+++.++.... .......+.+.... . =.+++|++
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~-~V~~~d~~~~~~~~~~~~~~~~v~~~~~-~~~~~~v~~~~~~~~~~~~iiiD~~ 87 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGY-PISILDREDWAVAESILANADVVIVSVP-INLTLETIERLKPYLTENMLLADLT 87 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTC-CEEEECTTCGGGHHHHHTTCSEEEECSC-GGGHHHHHHHHGGGCCTTSEEEECC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCC-CcEecccccccccchhhhhccccccccc-hhhheeeeecccccccCCceEEEec
Confidence 5799999 69999999999999999 8999999887766655566776665443 23344444444332 2 24888988
Q ss_pred CChHHHHHHH
Q 022865 273 GNVSVMRAAL 282 (291)
Q Consensus 273 g~~~~~~~~~ 282 (291)
+....+...+
T Consensus 88 Svk~~~~~~~ 97 (152)
T d2pv7a2 88 SVKREPLAKM 97 (152)
T ss_dssp SCCHHHHHHH
T ss_pred ccCHHHHHHH
Confidence 7654443333
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=94.60 E-value=0.024 Score=40.04 Aligned_cols=35 Identities=29% Similarity=0.414 Sum_probs=31.6
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+|.|+|+|-+|.+.++.|+.+|+ ++++.+.+++.
T Consensus 12 ~kigIlGgGQL~rMla~aA~~lG~-~v~v~d~~~~~ 46 (111)
T d1kjqa2 12 TRVMLLGSGELGKEVAIECQRLGV-EVIAVDRYADA 46 (111)
T ss_dssp CEEEEESCSHHHHHHHHHHHTTTC-EEEEEESSTTC
T ss_pred CEEEEEeCCHHHHHHHHHHHHCCC-EEEEEcCCCCC
Confidence 569999999999999999999999 89999887663
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.60 E-value=0.02 Score=45.90 Aligned_cols=34 Identities=29% Similarity=0.280 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.++|+|+|+|+.|++++..++..|+ +|+++++++
T Consensus 4 ~~kV~IiGaG~aGl~~A~~L~~~G~-~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSP 37 (265)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 5789999999999999999999999 999998754
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=94.54 E-value=0.19 Score=33.67 Aligned_cols=65 Identities=18% Similarity=0.315 Sum_probs=46.9
Q ss_pred EEEEEcCChHHHHH-HHHHHHcCCCeEEEEcCCh-hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGLGTVGLAV-AEGAKAAGASRVIGIDIDP-KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~g~vG~~a-i~~a~~~g~~~v~~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|-++|.|++|..+ +++++..|+ .|.+.|..+ +..+.+++.|+......+. ..+ .++|+|+-+..
T Consensus 3 ~ihfiGIgG~GMs~LA~~L~~~G~-~VsGSD~~~~~~t~~L~~~Gi~i~~gh~~--~~i---------~~~d~vV~SsA 69 (89)
T d1j6ua1 3 KIHFVGIGGIGMSAVALHEFSNGN-DVYGSNIEETERTAYLRKLGIPIFVPHSA--DNW---------YDPDLVIKTPA 69 (89)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEECSSCCHHHHHHHHTTCCEESSCCT--TSC---------CCCSEEEECTT
T ss_pred EEEEEeECHHHHHHHHHHHHhCCC-eEEEEeCCCChhHHHHHHCCCeEEeeecc--ccc---------CCCCEEEEecC
Confidence 57778999999765 688999999 999999887 4567788899865443222 111 25888887655
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.51 E-value=0.073 Score=42.40 Aligned_cols=97 Identities=14% Similarity=0.204 Sum_probs=63.7
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~ 262 (291)
....++||++||=+|+|. |..+..+++..|. .+|+++|.+++.++.+++. +....+..+..... .. ....
T Consensus 67 ~~l~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~---~~-~~~~ 141 (227)
T d1g8aa_ 67 KNFPIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPE---EY-RALV 141 (227)
T ss_dssp CCCCCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGG---GG-TTTC
T ss_pred cccccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcc---cc-cccc
Confidence 567789999999999876 8889999998863 4899999999988777543 22222222221111 01 1112
Q ss_pred CCccEEEEcCCCh----HHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIGNV----SVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g~~----~~~~~~~~~l~~~g 289 (291)
..+|+++..+..+ ..+..+.+.|+++|
T Consensus 142 ~~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG 172 (227)
T d1g8aa_ 142 PKVDVIFEDVAQPTQAKILIDNAEVYLKRGG 172 (227)
T ss_dssp CCEEEEEECCCSTTHHHHHHHHHHHHEEEEE
T ss_pred cceEEEEEEccccchHHHHHHHHHHhcccCC
Confidence 3688888765532 34667777888873
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=94.44 E-value=0.066 Score=41.68 Aligned_cols=36 Identities=31% Similarity=0.431 Sum_probs=32.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|++|.|+|.|.+|...+++++.+|+ +|++.+...+
T Consensus 42 ~gk~vgIiG~G~IG~~va~~l~~fg~-~V~~~d~~~~ 77 (197)
T d1j4aa1 42 RDQVVGVVGTGHIGQVFMQIMEGFGA-KVITYDIFRN 77 (197)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCC
T ss_pred cCCeEEEecccccchhHHHhHhhhcc-cccccCcccc
Confidence 47899999999999999999999999 9999987654
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.31 E-value=0.083 Score=42.02 Aligned_cols=91 Identities=16% Similarity=0.260 Sum_probs=60.3
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCC-EEeCCCCCCchHHHHHHhh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT-EFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~-~~i~~~~~~~~~~~~v~~~ 260 (291)
+.......+.++||=+|+|. |..+..+++ .|+ +|+++|.+++-++.+++. +.. .++..+ +.++
T Consensus 33 ~~~~~~~~~~~~iLDiGcGt-G~~~~~l~~-~~~-~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d---------~~~l 100 (251)
T d1wzna1 33 IFKEDAKREVRRVLDLACGT-GIPTLELAE-RGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGD---------VLEI 100 (251)
T ss_dssp HHHHTCSSCCCEEEEETCTT-CHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESC---------GGGC
T ss_pred HHHHhcCCCCCEEEEeCCCC-Cccchhhcc-cce-EEEEEeeccccccccccccccccccchheehh---------hhhc
Confidence 34455667778999999876 778887776 688 899999999888877643 322 122211 1222
Q ss_pred c-CCCccEEEEcCCC---------hHHHHHHHHHhhcc
Q 022865 261 T-DGGVDYSFECIGN---------VSVMRAALECCHKV 288 (291)
Q Consensus 261 ~-~gg~d~v~d~~g~---------~~~~~~~~~~l~~~ 288 (291)
. .+.||+|+...+. ...++.+.+.|+++
T Consensus 101 ~~~~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~Lkpg 138 (251)
T d1wzna1 101 AFKNEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPG 138 (251)
T ss_dssp CCCSCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEE
T ss_pred ccccccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCC
Confidence 2 2379998875432 14567778888888
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=94.25 E-value=0.029 Score=44.25 Aligned_cols=94 Identities=18% Similarity=0.180 Sum_probs=62.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~~ 259 (291)
+.+..+++++++||=+|+|. |..+..+++. |. +|+++|.+++-++.+++ .+.+. ++..+. .+ + .
T Consensus 7 ll~~~~l~~~~rVLDiGcG~-G~~~~~l~~~-~~-~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~--~~----l-~ 76 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVATGG-GHVANAFAPF-VK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDA--EQ----M-P 76 (231)
T ss_dssp HHHHHTCCSCCEEEEETCTT-CHHHHHHGGG-SS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC---C----C-C
T ss_pred HHHhcCCCCcCEEEEecccC-cHHHHHHHHh-CC-EEEEEECCHHHHhhhhhccccccccccccccccc--cc----c-c
Confidence 56778899999999999873 7777777754 66 89999999987776643 34332 222221 11 0 1
Q ss_pred hcCCCccEEEEcCC-----C-hHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFECIG-----N-VSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~~g-----~-~~~~~~~~~~l~~~g 289 (291)
+..+.||+|+..-. . ...+..+.++|+++|
T Consensus 77 ~~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG 112 (231)
T d1vl5a_ 77 FTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGG 112 (231)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred ccccccccccccccccccCCHHHHHHHHHHhcCCCc
Confidence 22347999886422 2 355788889999883
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.24 E-value=0.047 Score=42.32 Aligned_cols=40 Identities=30% Similarity=0.421 Sum_probs=35.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
++|.|+|+|.+|...++++...|+ .|+..|.+++.++.++
T Consensus 5 kkvaViGaG~mG~~iA~~~a~~G~-~V~l~D~~~~~l~~a~ 44 (192)
T d1f0ya2 5 KHVTVIGGGLMGAGIAQVAAATGH-TVVLVDQTEDILAKSK 44 (192)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHH
T ss_pred EEEEEECcCHHHHHHHHHHHhCCC-cEEEEECChHHHHHHH
Confidence 589999999999998888889999 9999999998766553
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.23 E-value=0.093 Score=39.97 Aligned_cols=84 Identities=17% Similarity=0.143 Sum_probs=56.7
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEE-EcCChhhHHH-HHhcCCCEEe-CCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDR-AKNFGVTEFV-NPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~-g~~~v~~-~~~~~~~~~~-~~~~ga~~~i-~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.|+|.|.+|...++..+.. ++ ++++ .+.++++.+. +++++..... .+ .++.+.+.+ ..+|+|+-++
T Consensus 3 ki~iIG~G~~g~~~~~~l~~~~~~-~i~ai~d~~~~~~~~~~~~~~~~~~~~~~----~~~~~ll~~---~~iD~v~I~t 74 (184)
T d1ydwa1 3 RIGVMGCADIARKVSRAIHLAPNA-TISGVASRSLEKAKAFATANNYPESTKIH----GSYESLLED---PEIDALYVPL 74 (184)
T ss_dssp EEEEESCCTTHHHHHHHHHHCTTE-EEEEEECSSHHHHHHHHHHTTCCTTCEEE----SSHHHHHHC---TTCCEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHhCCCC-EEEEEEeCCccccccchhccccccceeec----CcHHHhhhc---cccceeeecc
Confidence 588999999998888888777 55 6765 4677766444 4566643210 11 123333332 3699999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
.....++.+.+++..+
T Consensus 75 p~~~h~~~~~~~l~~g 90 (184)
T d1ydwa1 75 PTSLHVEWAIKAAEKG 90 (184)
T ss_dssp CGGGHHHHHHHHHTTT
T ss_pred cchhhcchhhhhhhcc
Confidence 9988899988888754
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=94.18 E-value=0.06 Score=44.03 Aligned_cols=94 Identities=14% Similarity=0.117 Sum_probs=63.1
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC--E-EeCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--E-FVNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~--~-~i~~~~~~~~~~~~v~ 258 (291)
+.....+.++.+||=+|+|. |..+..+++..|+ +|++++.++.-++.+++ .|.. . ++..+. .+ +
T Consensus 59 l~~~~~l~~~~~vLDiGcG~-G~~~~~la~~~~~-~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~--~~----l- 129 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLGAGY-GGAARFLVRKFGV-SIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSF--LE----I- 129 (282)
T ss_dssp HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCT--TS----C-
T ss_pred HHHhcCCCCCCEEEEeCCCC-cHHHhhhhccCCc-EEEEEeccchhhhhhhccccccccccccccccccc--cc----c-
Confidence 45567889999999999875 6777888888888 99999999987776654 3332 1 222111 01 0
Q ss_pred hhcCCCccEEEEc-----CCC-hHHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFEC-----IGN-VSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~-----~g~-~~~~~~~~~~l~~~ 288 (291)
.+..+.||+|+-. +.+ ...+..+.+.|+++
T Consensus 130 ~~~~~sfD~V~~~~~l~h~~d~~~~l~~~~~~Lkpg 165 (282)
T d2o57a1 130 PCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPR 165 (282)
T ss_dssp SSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEE
T ss_pred cccccccchhhccchhhhccCHHHHHHHHHHhcCCC
Confidence 1123479988763 222 45578888889998
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.15 E-value=0.16 Score=40.40 Aligned_cols=96 Identities=14% Similarity=0.114 Sum_probs=60.1
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcCC
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
....++||++||=+|+|. |..+..+++......|+++|.+++-++.+++. .....+..+..... ..... ..
T Consensus 68 ~~l~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~---~~~~~-~~ 142 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQ---EYANI-VE 142 (230)
T ss_dssp CCCCCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGG---GGTTT-CC
T ss_pred HhCCCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCc---ccccc-cc
Confidence 567799999999999876 78888888876545999999999887777653 22222222221111 01111 11
Q ss_pred CccEEEEcCCC----hHHHHHHHHHhhcc
Q 022865 264 GVDYSFECIGN----VSVMRAALECCHKV 288 (291)
Q Consensus 264 g~d~v~d~~g~----~~~~~~~~~~l~~~ 288 (291)
.+|+++..... ...+..+...|+++
T Consensus 143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpg 171 (230)
T d1g8sa_ 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKG 171 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEE
T ss_pred eeEEeeccccchHHHHHHHHHHHHhcccC
Confidence 45666665543 23356666677777
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.10 E-value=0.12 Score=37.90 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=28.9
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
.|++|||+|+|.+|..-+..+...|+ +|++++.
T Consensus 12 ~gkrvLViGgG~va~~ka~~Ll~~GA-~VtVvap 44 (150)
T d1kyqa1 12 KDKRILLIGGGEVGLTRLYKLMPTGC-KLTLVSP 44 (150)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTC-EEEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeC
Confidence 57899999999999999999999999 7887743
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=94.07 E-value=0.31 Score=35.63 Aligned_cols=81 Identities=11% Similarity=-0.027 Sum_probs=52.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHH---HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRA---KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~---~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+.++|+|.|.+|...++.+...|. .+++++.++++. +.+ ...+.. ++.-+. .-.+.+.+..-..+|.++-+
T Consensus 4 nHiII~G~g~~g~~l~~~L~~~~~-~v~vId~d~~~~~~~~~~~~~~~~~-vi~Gd~---~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 4 DHFIVCGHSILAINTILQLNQRGQ-NVTVISNLPEDDIKQLEQRLGDNAD-VIPGDS---NDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCHHHHHHHHHHHCTTCE-EEESCT---TSHHHHHHHTTTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCC-CEEEEeccchhHHHHHHHhhcCCcE-EEEccC---cchHHHHHhccccCCEEEEc
Confidence 568999999999999999999998 788888876542 222 223443 332222 12234444433378999999
Q ss_pred CCChHHHHHH
Q 022865 272 IGNVSVMRAA 281 (291)
Q Consensus 272 ~g~~~~~~~~ 281 (291)
++++..-..+
T Consensus 79 ~~~d~~n~~~ 88 (153)
T d1id1a_ 79 SDNDADNAFV 88 (153)
T ss_dssp SSCHHHHHHH
T ss_pred cccHHHHHHH
Confidence 8876543333
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=94.03 E-value=0.075 Score=43.92 Aligned_cols=74 Identities=23% Similarity=0.239 Sum_probs=45.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC--h---hhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCC-CccEEE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID--P---KKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDG-GVDYSF 269 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~--~---~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~g-g~d~v~ 269 (291)
+|||+|+ |-+|...+..+...|+ +|+++++- . ++++.+...+--+.+..+-.+. +.+.++..+ ++|+||
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~-~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~---~~l~~~~~~~~~d~Vi 77 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGI-DLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNK---NDVTRLITKYMPDSCF 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCH---HHHHHHHHHHCCSEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcC-EEEEEECCCcccchhHHHHhhccCCcEEEEcccCCH---HHHHHHHHhcCCceEE
Confidence 6999988 9999999988888899 89998632 1 2233333333223333222112 223333223 689999
Q ss_pred EcCCC
Q 022865 270 ECIGN 274 (291)
Q Consensus 270 d~~g~ 274 (291)
.+...
T Consensus 78 h~aa~ 82 (338)
T d1orra_ 78 HLAGQ 82 (338)
T ss_dssp ECCCC
T ss_pred eeccc
Confidence 98763
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=94.02 E-value=0.02 Score=37.66 Aligned_cols=35 Identities=23% Similarity=0.422 Sum_probs=31.0
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
++|.|+|+|-+|.+.++.++.+|+ ++++++.+++-
T Consensus 2 k~vgIlG~GQLgrMl~~Aa~~LG~-~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGNGQLGRMLRQAGEPLGI-AVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBCSHHHHHHHHHHGGGTE-EEEEECTTSCG
T ss_pred CEEEEEcCCHHHHHHHHHHHHcCC-EEEEEcCCCCC
Confidence 479999999999999999999999 88888776553
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=93.98 E-value=0.14 Score=38.75 Aligned_cols=90 Identities=22% Similarity=0.227 Sum_probs=51.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEc-CC-hhhHHHHHhcCCCEEeCCCCCCchHHH-------HHHhhcCCCcc
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGID-ID-PKKFDRAKNFGVTEFVNPKDHDKPIQQ-------VLVDLTDGGVD 266 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~-~~-~~~~~~~~~~ga~~~i~~~~~~~~~~~-------~v~~~~~gg~d 266 (291)
+|.|.|-|.+|...+..+.... . .++++- .+ ++....+.+++.+......+....+.. .+.++. .++|
T Consensus 4 rIaINGfGRIGR~v~Ral~~~~di-eiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~vD 81 (172)
T d2czca2 4 KVGVNGYGTIGKRVAYAVTKQDDM-ELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLL-EKVD 81 (172)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHH-TTCS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCc-eEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhh-ccCC
Confidence 6889999999998887775543 4 566553 22 344555666665544322111011100 011111 2699
Q ss_pred EEEEcCCChHHHHHHHHHhhcc
Q 022865 267 YSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
+|+||+|.-...+.+-..+..|
T Consensus 82 vViEcTG~f~~~~~~~~hl~~G 103 (172)
T d2czca2 82 IIVDATPGGIGAKNKPLYEKAG 103 (172)
T ss_dssp EEEECCSTTHHHHHHHHHHHHT
T ss_pred EEEECCCCCCCHHHHHHHHHcC
Confidence 9999999866666666555443
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=93.98 E-value=0.051 Score=45.69 Aligned_cols=46 Identities=30% Similarity=0.343 Sum_probs=37.7
Q ss_pred cCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 190 AKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 190 ~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
..+.+|++|||+|+ |-+|...+..+...|+ +|+++.++.++.+..+
T Consensus 6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~-~V~~~vR~~~~~~~~~ 52 (342)
T d1y1pa1 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQ 52 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred CCCCCcCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCchhHHHHH
Confidence 44678999999988 9999999888888898 8999888877665543
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.89 E-value=0.047 Score=38.48 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=31.3
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.++++|+|+|.+|+-+++.+..+|. +|+.+.+.+.
T Consensus 22 p~~v~IiGgG~ig~E~A~~l~~~G~-~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGE 56 (117)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CCeEEEECCCccceeeeeeeccccc-EEEEEEecce
Confidence 4789999999999999999999999 8999877664
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=93.88 E-value=0.033 Score=45.74 Aligned_cols=37 Identities=24% Similarity=0.315 Sum_probs=32.2
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
....++|+|+|+|..|+.++..+...|. +|++++.++
T Consensus 27 ~~~pkkV~IIGaG~aGLsaA~~L~~~G~-~V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVGAGMAGLSAAYVLAGAGH-QVTVLEASE 63 (370)
T ss_dssp CSSCCEEEEECCBHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCC
Confidence 4456799999999999999998888999 999998765
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=93.83 E-value=0.061 Score=38.36 Aligned_cols=38 Identities=34% Similarity=0.362 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.-.++++|+|+|+|.+|+-+++.+..+|. +|+.+++.+
T Consensus 26 ~~~~~k~vvViGgG~iG~E~A~~l~~~g~-~Vtlie~~~ 63 (123)
T d1nhpa2 26 VDPEVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILD 63 (123)
T ss_dssp TCTTCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred hccCCCEEEEECChHHHHHHHHHhhccce-EEEEEEecC
Confidence 33457899999999999999999999999 899987765
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.72 E-value=0.042 Score=43.64 Aligned_cols=38 Identities=24% Similarity=0.212 Sum_probs=33.3
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.+.+++|+|+|+|+.|+.++..++.+|+ +|+.++.+++
T Consensus 46 ~~~~k~VvIIGaGpAGl~aA~~l~~~G~-~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred ccCCceEEEEcccHHHHHHHHHHHHhcc-ceeeEeeccc
Confidence 3567899999999999999999999999 8999987664
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.68 E-value=0.14 Score=44.25 Aligned_cols=51 Identities=22% Similarity=0.322 Sum_probs=43.5
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+.+..++++++++|=+|+|. |..+.++|+..|++++++++.++.-.+++++
T Consensus 208 Il~~l~Lkpgd~fLDLGCG~-G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~ 258 (406)
T d1u2za_ 208 VYQQCQLKKGDTFMDLGSGV-GNCVVQAALECGCALSFGCEIMDDASDLTIL 258 (406)
T ss_dssp HHHHTTCCTTCEEEEESCTT-SHHHHHHHHHHCCSEEEEEECCHHHHHHHHH
T ss_pred HHHHhCCCCCCEEEeCCCCC-cHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 56778899999887788866 8999999999998799999999987777753
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.61 E-value=0.054 Score=38.35 Aligned_cols=38 Identities=11% Similarity=0.181 Sum_probs=32.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.++..++|+|+|+|.+|.-.++.++.+|. +|+.+.+.+
T Consensus 18 ~l~~p~~v~IiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~ 55 (117)
T d1onfa2 18 NIKESKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGN 55 (117)
T ss_dssp TCCCCSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSS
T ss_pred ccCCCCEEEEECCchHHHHHHHHHHhccc-cceeeehhc
Confidence 34456899999999999999999999999 899998764
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.55 E-value=0.083 Score=43.45 Aligned_cols=77 Identities=21% Similarity=0.232 Sum_probs=44.4
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCe--EEEEcCChhhH----HHHHhcC---CCE-Ee--CCCCCCchHHHHHHhhcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASR--VIGIDIDPKKF----DRAKNFG---VTE-FV--NPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~--v~~~~~~~~~~----~~~~~~g---a~~-~i--~~~~~~~~~~~~v~~~~~g 263 (291)
.|||+|+ +++|.+.+..+...|+.. |+.+.++.++. +.++++. ... .+ |..+ ..+..+.+.+...+
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~-~~~~~~~~~~~~~g 82 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRD-SKSVAAARERVTEG 82 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTC-HHHHHHHHHTCTTS
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccc-hHhhhhhhhhcccc
Confidence 4566687 999999888888888832 23334443322 2333332 222 22 3222 34455555555556
Q ss_pred CccEEEEcCCC
Q 022865 264 GVDYSFECIGN 274 (291)
Q Consensus 264 g~d~v~d~~g~ 274 (291)
.+|+++++.|.
T Consensus 83 ~idilvnnag~ 93 (285)
T d1jtva_ 83 RVDVLVCNAGL 93 (285)
T ss_dssp CCSEEEECCCC
T ss_pred chhhhhhcccc
Confidence 89999998874
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.52 E-value=0.37 Score=40.64 Aligned_cols=100 Identities=16% Similarity=0.275 Sum_probs=65.9
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhcCCCEEeCCCCC----------------
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDH---------------- 249 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~--~~~~~~~~~~~ga~~~i~~~~~---------------- 249 (291)
+...++++..|+.-.+|..|.+.+..|+.+|++-++.++. +++|.+..+.+|++.+......
T Consensus 90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~~~GA~vv~v~~~~~~~~~~~~~~~~~~~~ 169 (355)
T d1jbqa_ 90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLRALGAEIVRTPTNARFDSPESHVGVAWRLK 169 (355)
T ss_dssp HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHHHTTCEEEECCC-------CCHHHHHHHHH
T ss_pred HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHHhcCCeEEEecccccchhhhhhhhHHHHHH
Confidence 4445566777666677999999999999999955555433 3468888899999654421110
Q ss_pred --------------C-------chHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 250 --------------D-------KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 250 --------------~-------~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
+ .....++.+..++.+|.||-++|+-.++.-....++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~ 228 (355)
T d1jbqa_ 170 NEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKE 228 (355)
T ss_dssp HHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHH
T ss_pred HhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhh
Confidence 0 0122344444455789999999987766665555543
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.52 E-value=0.083 Score=42.64 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=31.8
Q ss_pred CCCEEEEEcC-ChHHHHHHH-HHHH--cCCCeEEEEcCChhhHHHH
Q 022865 194 PGSIVAVFGL-GTVGLAVAE-GAKA--AGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~-~a~~--~g~~~v~~~~~~~~~~~~~ 235 (291)
.|+++||.|+ +++|++.++ +|+. .|+ +|+.+++++++++.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~-~Vv~~~r~~~~l~~~ 49 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQL 49 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCC-EEEEEECCHHHHHHH
Confidence 4677788887 999998664 5553 588 999999999887665
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=93.48 E-value=0.31 Score=35.95 Aligned_cols=92 Identities=16% Similarity=0.220 Sum_probs=61.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcC--CCeEEEEcCChhh---HHHHHhcCCCEEeCCCCCC-chH---------------
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAG--ASRVIGIDIDPKK---FDRAKNFGVTEFVNPKDHD-KPI--------------- 253 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g--~~~v~~~~~~~~~---~~~~~~~ga~~~i~~~~~~-~~~--------------- 253 (291)
++|.|+|+ |.+|..+..+.+... + +|+++.....- .+.+++|....++..+... ..+
T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f-~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~ 80 (151)
T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRHNPEHF-RVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLS 80 (151)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTTE-EEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEE
T ss_pred CeEEEEcCCcHHHHHHHHHHHhCCCCc-EEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhcccccccc
Confidence 36899998 999999999999873 5 77776555543 3444678887766543310 011
Q ss_pred -HHHHHhhcCC-CccEEEEcCCChHHHHHHHHHhhcc
Q 022865 254 -QQVLVDLTDG-GVDYSFECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 254 -~~~v~~~~~g-g~d~v~d~~g~~~~~~~~~~~l~~~ 288 (291)
.+.+.++... .+|+|+..+.+-..+...+..++.+
T Consensus 81 g~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~g 117 (151)
T d1q0qa2 81 GQQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAG 117 (151)
T ss_dssp SHHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTT
T ss_pred ChHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcC
Confidence 1223333333 7999999988878888888877654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=93.44 E-value=0.083 Score=44.22 Aligned_cols=77 Identities=17% Similarity=0.096 Sum_probs=48.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH-HHHHhcC---CCEEeCCCCCCchHHHHHHhhcCC-CccE
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF-DRAKNFG---VTEFVNPKDHDKPIQQVLVDLTDG-GVDY 267 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~-~~~~~~g---a~~~i~~~~~~~~~~~~v~~~~~g-g~d~ 267 (291)
++++|||+|+ |-+|...++.+...|+ .|+++++.+.+. .+.+... .-+.+..+-.+.+ .+.+.... .+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~-~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~---~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGA-TVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQN---KLLESIREFQPEI 82 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHH---HHHHHHHHHCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCCCccHHHHhhhhcccCCeEEEeeccChH---hhhhhhhhchhhh
Confidence 5689999988 9999999999999999 899998876532 2222211 1122221111122 22222222 6899
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
|+.+++.
T Consensus 83 v~~~aa~ 89 (356)
T d1rkxa_ 83 VFHMAAQ 89 (356)
T ss_dssp EEECCSC
T ss_pred hhhhhcc
Confidence 9998875
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=93.44 E-value=0.21 Score=37.63 Aligned_cols=43 Identities=19% Similarity=0.187 Sum_probs=36.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG 239 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g 239 (291)
.+|-++|.|.+|...+.-+...|+ +|++.++++++.+.+.+.+
T Consensus 3 ~nIg~IGlG~MG~~mA~~L~~~G~-~V~v~dr~~~~~~~l~~~~ 45 (176)
T d2pgda2 3 ADIALIGLAVMGQNLILNMNDHGF-VVCAFNRTVSKVDDFLANE 45 (176)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSTHHHHHHHHTT
T ss_pred CcEEEEeEhHHHHHHHHHHHHCCC-eEEEEcCCHHHHHHHHHhc
Confidence 468899999999988877778899 8999999999988776543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=93.43 E-value=0.057 Score=38.07 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=30.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.++++|+|+|.+|+-+++.++.+|. +|+.+.+.+
T Consensus 21 p~~vvIiGgG~ig~E~A~~l~~~G~-~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFD 54 (116)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCEEEEECCChhhHHHHHHhhcccc-EEEEEeecc
Confidence 4789999999999999999999999 899988876
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=93.42 E-value=0.062 Score=44.10 Aligned_cols=37 Identities=30% Similarity=0.327 Sum_probs=31.2
Q ss_pred CCCEEEEEcC-C--hHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 194 PGSIVAVFGL-G--TVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~-g--~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
+|+++||+|+ | ++|++.++.+...|+ +|+..+++++.
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga-~Vvi~~~~~~~ 46 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGA-EILVGTWVPAL 46 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEEEHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEeCchhh
Confidence 6789999997 4 799999999999999 88888776543
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.28 E-value=0.21 Score=41.72 Aligned_cols=31 Identities=26% Similarity=0.217 Sum_probs=26.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
+.|||+|+ |-+|...+..+...|+ +|+++++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~-~V~~~d~ 33 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGY-DCVVADN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-eEEEEEC
Confidence 57899988 9999998888888898 8998864
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=93.27 E-value=0.56 Score=38.11 Aligned_cols=100 Identities=13% Similarity=0.222 Sum_probs=64.5
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhcCCCEEeCCCCC----------------
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDH---------------- 249 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~--~~~~~~~~~~~ga~~~i~~~~~---------------- 249 (291)
+.....+..+|+...+|..|++++..++.+|.+-++.++. ++.|.+..+.+|++.++...+.
T Consensus 53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~~~~~~a~~~~~~~~~~~ 132 (292)
T d2bhsa1 53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQGMEGARDLALEMANRG 132 (292)
T ss_dssp HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHHHTTCEEEEECTTTHHHHHHHHHHHHHHHT
T ss_pred HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHHHhCCCcceeecccchHHHHHHHhhccccc
Confidence 4455666676666677999999999999999854444432 4567888899999644322221
Q ss_pred ---------Cc--------hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 250 ---------DK--------PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 250 ---------~~--------~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
+. ....++.+..++.+|.++-++|+-.++.-....++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~ 187 (292)
T d2bhsa1 133 EGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMRE 187 (292)
T ss_dssp SSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHT
T ss_pred cccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhh
Confidence 00 122334444445689888888876666655555544
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=93.26 E-value=0.037 Score=43.43 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=29.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.|+|+|+|..|+.++..++..|.++|++++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 489999999999999999999975799998765
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.23 E-value=0.16 Score=40.46 Aligned_cols=47 Identities=28% Similarity=0.398 Sum_probs=40.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH-hcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK-NFGV 240 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~-~~ga 240 (291)
-.|.+|+|.|-|.+|..+++++..+|+ ++++++.+..+.+.+. +.|+
T Consensus 37 l~g~~v~IqG~GnVG~~~a~~L~~~Ga-kvv~~d~~~~~~~~~~~~~g~ 84 (230)
T d1leha1 37 LEGLAVSVQGLGNVAKALCKKLNTEGA-KLVVTDVNKAAVSAAVAEEGA 84 (230)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCC-EEEeecccHHHHHHHHHhcCC
Confidence 368899999999999999999999999 9999999988876664 4554
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=93.19 E-value=0.13 Score=37.86 Aligned_cols=38 Identities=29% Similarity=0.398 Sum_probs=31.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~ 231 (291)
.+..|.|+|+|.+|...++.+...+. ..++.+|.++++
T Consensus 5 ~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~ 43 (148)
T d1ldna1 5 GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESK 43 (148)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred CCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence 45689999999999998888887774 479999998877
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=93.17 E-value=0.19 Score=36.99 Aligned_cols=76 Identities=17% Similarity=0.267 Sum_probs=49.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH-HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA-KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|.++|.|.+|.+.+.-....|. ++++.+++.++.+.+ +++|....- +..+.+ + ..|+||=|+-.
T Consensus 2 kIg~IG~G~mG~al~~~l~~~~~-~i~v~~r~~~~~~~l~~~~g~~~~~-------~~~~~~-~----~~dvIilavkp- 67 (152)
T d2ahra2 2 KIGIIGVGKMASAIIKGLKQTPH-ELIISGSSLERSKEIAEQLALPYAM-------SHQDLI-D----QVDLVILGIKP- 67 (152)
T ss_dssp EEEEECCSHHHHHHHHHHTTSSC-EEEEECSSHHHHHHHHHHHTCCBCS-------SHHHHH-H----TCSEEEECSCG-
T ss_pred EEEEEeccHHHHHHHHHHHhCCC-eEEEEcChHHhHHhhccccceeeec-------hhhhhh-h----ccceeeeecch-
Confidence 47889999999987765555676 899999998886665 567754221 122222 2 37788877753
Q ss_pred HHHHHHHHHhh
Q 022865 276 SVMRAALECCH 286 (291)
Q Consensus 276 ~~~~~~~~~l~ 286 (291)
..+...++.++
T Consensus 68 ~~~~~vl~~l~ 78 (152)
T d2ahra2 68 QLFETVLKPLH 78 (152)
T ss_dssp GGHHHHHTTSC
T ss_pred HhHHHHhhhcc
Confidence 44555555443
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.16 E-value=0.074 Score=37.86 Aligned_cols=35 Identities=20% Similarity=0.442 Sum_probs=31.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.++++|+|+|.+|+-.++++..+|. +|+.+.+.+.
T Consensus 23 p~~~vIiG~G~ig~E~A~~l~~lG~-~Vtii~~~~~ 57 (122)
T d1v59a2 23 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQ 57 (122)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred CCeEEEECCCchHHHHHHHHHhhCc-ceeEEEeccc
Confidence 4789999999999999999999999 8999877653
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.13 E-value=0.056 Score=46.23 Aligned_cols=32 Identities=34% Similarity=0.277 Sum_probs=27.9
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
|.+|||+|+ |-+|...+..+...|+ .|+++|.
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~-~V~~iDn 33 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNY-EVCIVDN 33 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEec
Confidence 678999998 9999999988889998 8999973
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.12 E-value=0.06 Score=43.91 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=31.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
++..+|+|+|+|..|+.|+..+...|+ +|++++.++
T Consensus 3 ~~~~kViVIGaG~aGL~aA~~L~~~G~-~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGSGVSGLAAARQLQSFGM-DVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCC
Confidence 456689999999999999999999999 899987654
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=93.10 E-value=0.089 Score=42.76 Aligned_cols=87 Identities=21% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE---EeCCCCCCchHHHHHHhhcCC
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE---FVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~---~i~~~~~~~~~~~~v~~~~~g 263 (291)
.+++|++||-+++|. |..++.+|+. |..+|+++|.+++..+.+++ .+.+. ++..+. .++...
T Consensus 104 ~~~~g~~VlD~~aG~-G~~~l~~a~~-~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~---------~~~~~~ 172 (260)
T d2frna1 104 VAKPDELVVDMFAGI-GHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN---------RDFPGE 172 (260)
T ss_dssp HCCTTCEEEETTCTT-TTTHHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT---------TTCCCC
T ss_pred hcCCccEEEECcceE-cHHHHHHHHh-CCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch---------HHhccC
Confidence 468999999886633 4455566665 44499999999998887753 34322 232221 122223
Q ss_pred -CccEEE-Ec-CCChHHHHHHHHHhhcc
Q 022865 264 -GVDYSF-EC-IGNVSVMRAALECCHKV 288 (291)
Q Consensus 264 -g~d~v~-d~-~g~~~~~~~~~~~l~~~ 288 (291)
.+|.|+ +. -.....+..+++.++++
T Consensus 173 ~~~D~Ii~~~p~~~~~~l~~a~~~l~~g 200 (260)
T d2frna1 173 NIADRILMGYVVRTHEFIPKALSIAKDG 200 (260)
T ss_dssp SCEEEEEECCCSSGGGGHHHHHHHEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHhhcCCC
Confidence 688554 43 23456688899999887
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.10 E-value=0.088 Score=38.07 Aligned_cols=39 Identities=28% Similarity=0.358 Sum_probs=33.8
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.++++++++|+|+|.+|+-++..++.+|. +|+.+++.+.
T Consensus 31 ~~~~~k~v~VIGgG~iG~E~A~~l~~~g~-~Vtvie~~~~ 69 (133)
T d1q1ra2 31 QLIADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAAR 69 (133)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred hhccCCEEEEECCchHHHHHHHHHHhhCc-ceeeeeeccc
Confidence 34567899999999999999999999999 8999887653
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=92.95 E-value=0.051 Score=44.66 Aligned_cols=90 Identities=16% Similarity=0.113 Sum_probs=60.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcC-----C--C---EEeCCCCCCchHHHHHHhhcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFG-----V--T---EFVNPKDHDKPIQQVLVDLTD 262 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~g-----a--~---~~i~~~~~~~~~~~~v~~~~~ 262 (291)
.+.++|||+|+|. |..+..+++..+..+|.+++-+++-.+.++++- + + .++. .+..+.+++. .
T Consensus 74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~-----~D~~~~l~~~-~ 146 (274)
T d1iy9a_ 74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQV-----DDGFMHIAKS-E 146 (274)
T ss_dssp SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEE-----SCSHHHHHTC-C
T ss_pred CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEe-----chHHHHHhhc-C
Confidence 3457999998765 666777788778779999999999999887753 1 0 0111 1233445543 3
Q ss_pred CCccEEE-EcCC---------ChHHHHHHHHHhhccC
Q 022865 263 GGVDYSF-ECIG---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~-d~~g---------~~~~~~~~~~~l~~~g 289 (291)
..+|+|+ |... +.+.++.+.++|+++|
T Consensus 147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~G 183 (274)
T d1iy9a_ 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDG 183 (274)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEE
T ss_pred CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCc
Confidence 4899775 4322 3456888888898884
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=92.89 E-value=0.086 Score=37.30 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=30.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.+++++|+|+|.+|+-.+++++.+|. +|+.+.+.+
T Consensus 21 ~p~~i~IiG~G~ig~E~A~~l~~~G~-~Vtiv~~~~ 55 (119)
T d3lada2 21 VPGKLGVIGAGVIGLELGSVWARLGA-EVTVLEAMD 55 (119)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSS
T ss_pred CCCeEEEECCChHHHHHHHHHHHcCC-ceEEEEeec
Confidence 34789999999999999999999999 788877665
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.88 E-value=0.056 Score=43.33 Aligned_cols=34 Identities=24% Similarity=0.330 Sum_probs=29.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|+|+|+|+.|++++.+++..|..+|++++.+++
T Consensus 3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 6899999999999999999999768888887654
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=92.81 E-value=0.18 Score=40.10 Aligned_cols=34 Identities=35% Similarity=0.560 Sum_probs=29.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
+.|||+|+ +++|++.++.+...|+ +|+.++++++
T Consensus 2 kVvlITGas~GIG~aiA~~la~~Ga-~V~~~~~~~~ 36 (257)
T d1fjha_ 2 SIIVISGCATGIGAATRKVLEAAGH-QIVGIDIRDA 36 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSSS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECChH
Confidence 46788887 9999999999889999 8999987754
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=92.80 E-value=0.17 Score=39.80 Aligned_cols=83 Identities=17% Similarity=0.219 Sum_probs=53.8
Q ss_pred EEEEEcCChHHH-HHHHHHHHc-CCCeEE-EEcCChhhHHH-HHhcCCCE--EeCCCCCCchHHHHHHhhcC-CCccEEE
Q 022865 197 IVAVFGLGTVGL-AVAEGAKAA-GASRVI-GIDIDPKKFDR-AKNFGVTE--FVNPKDHDKPIQQVLVDLTD-GGVDYSF 269 (291)
Q Consensus 197 ~vlI~G~g~vG~-~ai~~a~~~-g~~~v~-~~~~~~~~~~~-~~~~ga~~--~i~~~~~~~~~~~~v~~~~~-gg~d~v~ 269 (291)
+|.|+|.|.+|. ..+...+.. +. +|+ ++++++++.+. +++++.+. +..+++ +.++.. ..+|+|+
T Consensus 35 riaiIG~G~~~~~~~~~~~~~~~~~-~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d--------~~ell~~~~iD~V~ 105 (221)
T d1h6da1 35 GYAIVGLGKYALNQILPGFAGCQHS-RIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--------FDKIAKDPKIDAVY 105 (221)
T ss_dssp EEEEECCSHHHHHTHHHHTTTCSSE-EEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--------GGGGGGCTTCCEEE
T ss_pred EEEEEcCcHHHHHHHHHHHHhCCCc-eEEEEecCCHHHHHHHHHhhccccccccccCc--------hhhhcccccceeee
Confidence 788999999886 344444443 56 566 56777777544 45676532 333332 223232 3799999
Q ss_pred EcCCChHHHHHHHHHhhcc
Q 022865 270 ECIGNVSVMRAALECCHKV 288 (291)
Q Consensus 270 d~~g~~~~~~~~~~~l~~~ 288 (291)
-++........++++|..+
T Consensus 106 I~tp~~~H~~~~~~al~~g 124 (221)
T d1h6da1 106 IILPNSLHAEFAIRAFKAG 124 (221)
T ss_dssp ECSCGGGHHHHHHHHHHTT
T ss_pred eccchhhhhhHHHHhhhcc
Confidence 9999888888888888654
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.77 E-value=0.076 Score=40.35 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
-++++|||+|+|+.+.+++..+. +..+|+.+.++.+|.+.+
T Consensus 16 ~~~k~vlIlGaGG~arai~~aL~--~~~~i~I~nR~~~ka~~l 56 (177)
T d1nvta1 16 VKDKNIVIYGAGGAARAVAFELA--KDNNIIIANRTVEKAEAL 56 (177)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHT--SSSEEEEECSSHHHHHHH
T ss_pred cCCCEEEEECCcHHHHHHHHHHc--cccceeeehhhhhHHHHH
Confidence 46789999999999998877664 344899999998886554
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=92.75 E-value=0.068 Score=44.94 Aligned_cols=95 Identities=26% Similarity=0.197 Sum_probs=55.5
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhhc--CCC
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~~--~gg 264 (291)
.++++++||=+++|. |..++.++ ..|+.+|+++|.+++.++.+++ .|....+.... .+..+.+..+. +..
T Consensus 142 ~~~~g~~VLDl~~g~-G~~si~~a-~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~--~d~~~~~~~~~~~~~~ 217 (324)
T d2as0a2 142 WVQPGDRVLDVFTYT-GGFAIHAA-IAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIV--GSAFEEMEKLQKKGEK 217 (324)
T ss_dssp GCCTTCEEEETTCTT-THHHHHHH-HTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHTTCC
T ss_pred hcCCCCeeecccCcc-cchhhhhh-hcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeee--chhhhhhHHHHhccCC
Confidence 357889988776533 33444444 3477799999999999888854 44422111111 22333343332 238
Q ss_pred ccEEEEcCCC---------------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIGN---------------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g~---------------~~~~~~~~~~l~~~g 289 (291)
||+|+--.+. ...+..++++|++||
T Consensus 218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG 257 (324)
T d2as0a2 218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGG 257 (324)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEE
T ss_pred CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 9987752221 235677778888883
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=92.70 E-value=0.075 Score=41.95 Aligned_cols=35 Identities=29% Similarity=0.283 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+..++|+|+|+|..|++++..+...|. +|+++++.
T Consensus 4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~-~V~vier~ 38 (268)
T d1c0pa1 4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARD 38 (268)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCCCcEEEECccHHHHHHHHHHHHCCC-CEEEEeCC
Confidence 344689999999999999999999999 89999864
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.65 E-value=0.027 Score=46.55 Aligned_cols=98 Identities=12% Similarity=-0.004 Sum_probs=58.0
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCCEEe-CCCCCCchHHHHHHhhcC-
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVTEFV-NPKDHDKPIQQVLVDLTD- 262 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~~~i-~~~~~~~~~~~~v~~~~~- 262 (291)
..+.+++++||=+|+|. |..++.+++. |+ +|+++|.+++-++.+++. +..... .......++...-.....
T Consensus 51 ~l~~~~~~~vLD~GcG~-G~~~~~la~~-g~-~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (292)
T d1xvaa_ 51 LLRQHGCHRVLDVACGT-GVDSIMLVEE-GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAG 127 (292)
T ss_dssp HHHHTTCCEEEESSCTT-SHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCT
T ss_pred HhhhcCCCEEEEecCCC-cHHHHHHHHc-CC-eeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCC
Confidence 34445678999888866 7778888865 88 899999999988777542 111000 000000111111122222
Q ss_pred CCccEEEEcCCC--------------hHHHHHHHHHhhccC
Q 022865 263 GGVDYSFECIGN--------------VSVMRAALECCHKVS 289 (291)
Q Consensus 263 gg~d~v~d~~g~--------------~~~~~~~~~~l~~~g 289 (291)
..+|.|+..... ...++.+.+.|+++|
T Consensus 128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 168 (292)
T d1xvaa_ 128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGG 168 (292)
T ss_dssp TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEE
T ss_pred CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCc
Confidence 379988864321 135788888888883
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=92.65 E-value=0.22 Score=40.23 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=28.7
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.++|||+|+ |-+|...+..+...|. .|+++.+++
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~-~V~~~~R~~ 37 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGH-PTYVLFRPE 37 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEECCC
Confidence 456999998 9999999988888998 888887754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=92.60 E-value=0.09 Score=36.86 Aligned_cols=35 Identities=23% Similarity=0.355 Sum_probs=31.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
+++++|+|+|.+|+-+++.++.+|. +|+.+++.+.
T Consensus 21 p~~vvIiGgG~~G~E~A~~l~~~g~-~Vtlve~~~~ 55 (115)
T d1lvla2 21 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARER 55 (115)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHhhccc-ceEEEeeecc
Confidence 3789999999999999999999999 8999877653
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=92.55 E-value=0.6 Score=33.63 Aligned_cols=76 Identities=18% Similarity=0.220 Sum_probs=51.2
Q ss_pred EEEEEcC-ChHHHHHHHHHHHc-CCCeEEE-EcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~-g~~~v~~-~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
+|.|.|+ |.+|...++..... ++ .+++ ++.. +.+......++|.++|... ++...+.+......+.-+|+-++|
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~-~l~~~~d~~-~~~~~~~~~~~DvvIDFS~-p~~~~~~~~~~~~~~~~~ViGTTG 77 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDL-TLSAELDAG-DPLSLLTDGNTEVVIDFTH-PDVVMGNLEFLIDNGIHAVVGTTG 77 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTS-EEEEEECTT-CCTHHHHTTTCSEEEECCC-TTTHHHHHHHHHHTTCEEEECCCC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCC-EEEEEEecC-CchhhhccccCCEEEEccc-HHHHHHHHHHHHhcCCCEEEeccc
Confidence 5889997 99999988877665 56 5554 5543 3344444567888888876 344445555544447889999988
Q ss_pred Ch
Q 022865 274 NV 275 (291)
Q Consensus 274 ~~ 275 (291)
-.
T Consensus 78 ~~ 79 (135)
T d1yl7a1 78 FT 79 (135)
T ss_dssp CC
T ss_pred cc
Confidence 53
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=92.47 E-value=0.082 Score=37.64 Aligned_cols=33 Identities=21% Similarity=0.079 Sum_probs=28.9
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
.++++|+|+|.+|+-.+++++.+|. +|+.+.++
T Consensus 20 P~~vvIIGgG~iG~E~A~~l~~lG~-~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS 52 (122)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCeEEEECCCccHHHHHHHHhhcCC-eEEEEEec
Confidence 4689999999999999999999999 77777654
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=92.36 E-value=0.25 Score=39.10 Aligned_cols=97 Identities=15% Similarity=0.273 Sum_probs=63.3
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHHhh----
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLVDL---- 260 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~~~---- 260 (291)
.+....++||-+|.+ .|+.++.+|+++. -.+|+.++.+++..+.+++ .|....+.... .+..+.+.++
T Consensus 55 ~~~~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~--g~a~~~L~~l~~~~ 131 (227)
T d1susa1 55 LKLINAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFRE--GPALPVLDEMIKDE 131 (227)
T ss_dssp HHHHTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEE--SCHHHHHHHHHHCG
T ss_pred HHhcCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeee--hHHHHHHHHHHhcc
Confidence 344566899999874 4888889998874 2399999999998877754 45543222221 1233333333
Q ss_pred -cCCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 261 -TDGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 261 -~~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
..+.||+||-=... ...++.+++.|+++|
T Consensus 132 ~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gG 164 (227)
T d1susa1 132 KNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGG 164 (227)
T ss_dssp GGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTC
T ss_pred ccCCceeEEEeccchhhhHHHHHHHHhhcCCCc
Confidence 23479977753332 456888999999984
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=92.31 E-value=0.16 Score=42.31 Aligned_cols=73 Identities=22% Similarity=0.230 Sum_probs=44.3
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC----ChhhHHHHHhc---CCCEEeCCCC-CCchHHHHHHhhcCCCccE
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI----DPKKFDRAKNF---GVTEFVNPKD-HDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~----~~~~~~~~~~~---ga~~~i~~~~-~~~~~~~~v~~~~~gg~d~ 267 (291)
+|||+|+ |-+|...+..+...|. .|+++++ ........+.+ ... .+..+- +...+.+.+.+ .++|+
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~---~~~d~ 76 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGH-DVIILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALMTEILHD---HAIDT 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSSCCTTHHHHHHHHHTSCCE-EEECCTTCHHHHHHHHHH---TTCSE
T ss_pred EEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcchhhHHHHHhhcCCCCE-EEEeecCCHHHHHHHHhc---cCCCE
Confidence 5899988 9999999998888998 8998864 22223332222 222 222221 11233333332 27999
Q ss_pred EEEcCCC
Q 022865 268 SFECIGN 274 (291)
Q Consensus 268 v~d~~g~ 274 (291)
||.+++.
T Consensus 77 ViHlAa~ 83 (338)
T d1udca_ 77 VIHFAGL 83 (338)
T ss_dssp EEECCSC
T ss_pred EEECCCc
Confidence 9998753
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=92.24 E-value=0.47 Score=39.05 Aligned_cols=99 Identities=16% Similarity=0.158 Sum_probs=66.3
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC--hhhHHHHHhcCCCEEeCCCCC----------------
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID--PKKFDRAKNFGVTEFVNPKDH---------------- 249 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~--~~~~~~~~~~ga~~~i~~~~~---------------- 249 (291)
....+.++++|+...+|.-|.+++..++.+|+..++.+..+ ..|.+..+.+|+..+......
T Consensus 54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~vv~~~~~~~~~~~~~~~~~~~~~~ 133 (310)
T d1y7la1 54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGAKGMKGAIAKAEEIVASD 133 (310)
T ss_dssp HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHC
T ss_pred HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHHHhCCceEeccCccccchhhHHHHHHHHhh
Confidence 34455677776666779999999999999999666665443 356777788998655321110
Q ss_pred -----------Cc--------hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhh
Q 022865 250 -----------DK--------PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 250 -----------~~--------~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~ 286 (291)
+. ....++.+..++.+|.|+-++|+-.++.-....++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk 189 (310)
T d1y7la1 134 PSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK 189 (310)
T ss_dssp TTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred cCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence 00 12334555555578999999998777766666664
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=92.24 E-value=0.54 Score=35.60 Aligned_cols=84 Identities=19% Similarity=0.222 Sum_probs=47.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEc-CCh-hhHHHHHhcCCCEEeCCCC----------CCchHHHHHHhhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGID-IDP-KKFDRAKNFGVTEFVNPKD----------HDKPIQQVLVDLTDG 263 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~-~~~-~~~~~~~~~ga~~~i~~~~----------~~~~~~~~v~~~~~g 263 (291)
+|.|.|-|.+|...+..+.... . .++++. ..+ .....+...+.......+. ....+.+.. .
T Consensus 3 KVaINGfGRIGR~v~Ral~~~~di-evVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~-----~ 76 (178)
T d1b7go1 3 NVAVNGYGTIGKRVADAIIKQPDM-KLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLI-----K 76 (178)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTE-EEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----H
T ss_pred EEEEECCCHHHHHHHHHHHhCCCC-EEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhh-----h
Confidence 5889999999999998887664 5 677753 332 2333333333322211110 001111111 1
Q ss_pred CccEEEEcCCChHHHHHHHHHhh
Q 022865 264 GVDYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 264 g~d~v~d~~g~~~~~~~~~~~l~ 286 (291)
++|+|+||+|.-...+.+-..++
T Consensus 77 ~vDiViecTG~f~~~e~a~~hl~ 99 (178)
T d1b7go1 77 TSDIVVDTTPNGVGAQYKPIYLQ 99 (178)
T ss_dssp HCSEEEECCSTTHHHHHHHHHHH
T ss_pred cCCEEEECCCCcCCHHHHHHHHH
Confidence 58999999998666666655554
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.21 E-value=0.071 Score=42.22 Aligned_cols=77 Identities=22% Similarity=0.263 Sum_probs=45.8
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
+.++|||+|+ |-+|...++.+...|. .+|+++.+++.+...-..-.....+ .+. .+ .+.+.+.. .++|+++.+
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~i~~~~-~D~--~~-~~~~~~~~-~~~d~vi~~ 87 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEV-VDF--EK-LDDYASAF-QGHDVGFCC 87 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGGCEEEE-CCG--GG-GGGGGGGG-SSCSEEEEC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccceeeeee-ecc--cc-cccccccc-ccccccccc
Confidence 4468999998 9999998888877774 4899988865432211111121111 111 11 11222222 269999999
Q ss_pred CCCh
Q 022865 272 IGNV 275 (291)
Q Consensus 272 ~g~~ 275 (291)
+|..
T Consensus 88 ~~~~ 91 (232)
T d2bkaa1 88 LGTT 91 (232)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9863
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=92.10 E-value=0.11 Score=37.16 Aligned_cols=36 Identities=19% Similarity=0.305 Sum_probs=31.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+.+++++|+|+|.+|+-.+++.+.+|. +|+.+...+
T Consensus 24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~-~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred ccCCeEEEECCCHHHHHHHHHhhcCCC-EEEEEEeec
Confidence 345899999999999999999999999 898887765
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.06 E-value=0.12 Score=36.71 Aligned_cols=34 Identities=15% Similarity=0.132 Sum_probs=30.7
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.++++|+|+|.+|+-.++.++.+|. +|+.+.+++
T Consensus 22 pk~vvIvGgG~iG~E~A~~l~~~G~-~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHD 55 (125)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSS
T ss_pred CCEEEEEcCCccHHHHHHHHhcCCc-EEEEEeecc
Confidence 3789999999999999999999999 899988865
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.06 E-value=0.12 Score=38.79 Aligned_cols=38 Identities=21% Similarity=0.267 Sum_probs=32.5
Q ss_pred EEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH
Q 022865 197 IVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA 235 (291)
Q Consensus 197 ~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~ 235 (291)
+|.|+ |+|.+|.+.++.+...|+ +|+..++++++++.+
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~-~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGH-EIVVGSRREEKAEAK 40 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTC-EEEEEESSHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHH
Confidence 57888 569999999999999999 899999999886555
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=92.04 E-value=0.065 Score=43.58 Aligned_cols=33 Identities=24% Similarity=0.354 Sum_probs=29.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|+|+|+|+.|++++..++..|+ +|++++..++
T Consensus 4 ~V~IvGaGp~Gl~~A~~L~~~G~-~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP 36 (292)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence 58999999999999999999999 8999988764
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=92.03 E-value=0.082 Score=37.65 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
..++++|+|+|.+|+-.+++.+.+|. +|+.+.+++.
T Consensus 24 ~p~~~viiG~G~iglE~A~~~~~~G~-~Vtvi~~~~~ 59 (123)
T d1dxla2 24 IPKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASE 59 (123)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSS
T ss_pred cCCeEEEEccchHHHHHHHHHHhcCC-eEEEEEEccc
Confidence 45799999999999999999999999 8999977664
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=91.88 E-value=0.15 Score=42.25 Aligned_cols=32 Identities=25% Similarity=0.270 Sum_probs=28.6
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+++||+|+ |-+|...+..+...|+ +|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~-~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGY-EVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcC-EEEEEECC
Confidence 57899998 9999999999988999 99999874
|
| >d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ta1320-like domain: Hypothetical protein Ta1320 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=91.79 E-value=0.19 Score=38.87 Aligned_cols=71 Identities=25% Similarity=0.342 Sum_probs=46.4
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-EEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
....+ .|++||=+|+|. |.+++. +..+|+.+|+++|.+++..+.+++.-.. .++..+ +.+ .++.||
T Consensus 43 ~~~dl-~Gk~VLDlGcGt-G~l~i~-a~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D---------~~~-l~~~fD 109 (197)
T d1ne2a_ 43 NDGNI-GGRSVIDAGTGN-GILACG-SYLLGAESVTAFDIDPDAIETAKRNCGGVNFMVAD---------VSE-ISGKYD 109 (197)
T ss_dssp HHTSS-BTSEEEEETCTT-CHHHHH-HHHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECC---------GGG-CCCCEE
T ss_pred HcCCC-CCCEEEEeCCCC-cHHHHH-HHHcCCCcccccccCHHHHHHHHHccccccEEEEe---------hhh-cCCcce
Confidence 44444 588999998764 555544 4457877899999999999988875332 233221 112 245799
Q ss_pred EEEEc
Q 022865 267 YSFEC 271 (291)
Q Consensus 267 ~v~d~ 271 (291)
+||-.
T Consensus 110 ~Vi~N 114 (197)
T d1ne2a_ 110 TWIMN 114 (197)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88854
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=91.77 E-value=0.21 Score=41.50 Aligned_cols=74 Identities=20% Similarity=0.244 Sum_probs=45.7
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC-CCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK-DHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~-~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|||+|+ |-+|...++.+...|..+|++++....+.+...+..--+.+..+ .+..++.+.+.. ++|+||.+++.
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~~ 77 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVAI 77 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBCC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHh----CCCcccccccc
Confidence 5899988 99999988887788854899998776554433222111222221 122333333322 58999998874
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=91.74 E-value=0.16 Score=41.21 Aligned_cols=36 Identities=25% Similarity=0.262 Sum_probs=27.0
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC-ChhhHH
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI-DPKKFD 233 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~-~~~~~~ 233 (291)
.+||+|+ +++|.+.++.+...|+ +|+.+++ ++++.+
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~~~~ 41 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGY-AVCLHYHRSAAEAN 41 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCC-EEEEEeCCCHHHHH
Confidence 4677787 9999999999889999 7776544 444443
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=91.74 E-value=0.33 Score=37.25 Aligned_cols=36 Identities=19% Similarity=0.390 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.++++.|+|.|.+|...+++++.+|. +|+..+....
T Consensus 46 ~g~tvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~ 81 (191)
T d1gdha1 46 DNKTLGIYGFGSIGQALAKRAQGFDM-DIDYFDTHRA 81 (191)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSCC
T ss_pred cccceEEeecccchHHHHHHHHhhcc-cccccccccc
Confidence 37899999999999999999999999 8999887544
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=91.73 E-value=0.32 Score=40.41 Aligned_cols=95 Identities=17% Similarity=0.050 Sum_probs=58.3
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC--EEeCCCC---CCchHHHHHHhhcCCCccE
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT--EFVNPKD---HDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~--~~i~~~~---~~~~~~~~v~~~~~gg~d~ 267 (291)
...++|||+|+|. |..+-.+++.....+|.+++-+++-.+.++++-.. ...+... .-.+..+.+++ ....+|+
T Consensus 105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~-~~~~yDv 182 (312)
T d2b2ca1 105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKN-HKNEFDV 182 (312)
T ss_dssp SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHH-CTTCEEE
T ss_pred CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHh-CCCCCCE
Confidence 3457899998765 55566777777777999999999999999875321 0010000 01234455654 3448997
Q ss_pred EEEcCC----------ChHHHHHHHHHhhccC
Q 022865 268 SFECIG----------NVSVMRAALECCHKVS 289 (291)
Q Consensus 268 v~d~~g----------~~~~~~~~~~~l~~~g 289 (291)
||--.. +.+.++.+.++|+++|
T Consensus 183 II~D~~dp~~~~~~L~t~eFy~~~~~~L~~~G 214 (312)
T d2b2ca1 183 IITDSSDPVGPAESLFGQSYYELLRDALKEDG 214 (312)
T ss_dssp EEECCC-------------HHHHHHHHEEEEE
T ss_pred EEEcCCCCCCcchhhhhHHHHHHHHhhcCCCc
Confidence 774221 2344667777788773
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=91.69 E-value=0.12 Score=38.37 Aligned_cols=36 Identities=36% Similarity=0.341 Sum_probs=30.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC-eEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGAS-RVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~-~v~~~~~~~ 229 (291)
.|++|+|+|+|..|+.+++.++.++.. +|+.++..+
T Consensus 1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 478999999999999999888888742 788887665
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=91.64 E-value=0.24 Score=41.64 Aligned_cols=33 Identities=27% Similarity=0.315 Sum_probs=27.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+.+||+|+ |-+|...+..+...|. .|+++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~-~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGY-EVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcC-EEEEEECCC
Confidence 67899987 9999999988888898 999998754
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=91.63 E-value=0.36 Score=35.23 Aligned_cols=39 Identities=18% Similarity=0.226 Sum_probs=30.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAK 236 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~ 236 (291)
+|-|+|.|.+|...+.-+...|. .|++.++.+++....+
T Consensus 2 kIgiIG~G~mG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~ 40 (152)
T d1i36a2 2 RVGFIGFGEVAQTLASRLRSRGV-EVVTSLEGRSPSTIER 40 (152)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTC-EEEECCTTCCHHHHHH
T ss_pred EEEEEcHHHHHHHHHHHHHHCCC-eEEEEcCchhHHHHHh
Confidence 57889999999998888888898 8888876665544443
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=91.60 E-value=0.8 Score=34.31 Aligned_cols=83 Identities=13% Similarity=0.065 Sum_probs=54.5
Q ss_pred EEEEEcCChHHHH-HHHHHHHcCCC-eEEE-EcCChhhHHH-HHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLA-VAEGAKAAGAS-RVIG-IDIDPKKFDR-AKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~-ai~~a~~~g~~-~v~~-~~~~~~~~~~-~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
++.|+|.|.+|.- .+...+...-. ++++ .++++++.+. +++++...++. ++.+.+.+ ..+|+|+-|+
T Consensus 5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~------~~~ell~~---~~id~v~I~t 75 (181)
T d1zh8a1 5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD------SYEELLES---GLVDAVDLTL 75 (181)
T ss_dssp EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES------CHHHHHHS---SCCSEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee------eeeccccc---cccceeeccc
Confidence 6889999999964 45666655421 5664 5777776554 45677654432 23333332 3699999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
.+......+..++..+
T Consensus 76 p~~~h~~~~~~al~~g 91 (181)
T d1zh8a1 76 PVELNLPFIEKALRKG 91 (181)
T ss_dssp CGGGHHHHHHHHHHTT
T ss_pred cccccccccccccccc
Confidence 9887788888877653
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=91.52 E-value=0.16 Score=38.96 Aligned_cols=82 Identities=15% Similarity=0.135 Sum_probs=52.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-----EeCCCC--CCchHHHHHHhhcCCCccEEE
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-----FVNPKD--HDKPIQQVLVDLTDGGVDYSF 269 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-----~i~~~~--~~~~~~~~v~~~~~gg~d~v~ 269 (291)
+|.|+|+|..|.+.+..+...|. +|+..+++++..+...+.+-.. +...+. ...++.+.+. +.|+||
T Consensus 9 KI~ViGaG~wGtAlA~~La~~g~-~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~-----~ad~ii 82 (189)
T d1n1ea2 9 KAVVFGSGAFGTALAMVLSKKCR-EVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYN-----GAEIIL 82 (189)
T ss_dssp EEEEECCSHHHHHHHHHHHTTEE-EEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHT-----TCSCEE
T ss_pred eEEEECCCHHHHHHHHHHHHcCC-eEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccC-----CCCEEE
Confidence 69999999999998888877777 8999999998887775433111 000000 0012222222 489999
Q ss_pred EcCCChHHHHHHHHHh
Q 022865 270 ECIGNVSVMRAALECC 285 (291)
Q Consensus 270 d~~g~~~~~~~~~~~l 285 (291)
-+++... ++..++.+
T Consensus 83 iavPs~~-~~~~~~~~ 97 (189)
T d1n1ea2 83 FVIPTQF-LRGFFEKS 97 (189)
T ss_dssp ECSCHHH-HHHHHHHH
T ss_pred EcCcHHH-HHHHHHHH
Confidence 9998743 55555544
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=91.29 E-value=0.41 Score=36.43 Aligned_cols=37 Identities=38% Similarity=0.447 Sum_probs=32.8
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.++++.|+|.|.+|...+++++.+|. +|++.++...+
T Consensus 43 ~~k~vgiiG~G~IG~~va~~~~~fg~-~v~~~d~~~~~ 79 (184)
T d1ygya1 43 FGKTVGVVGLGRIGQLVAQRIAAFGA-YVVAYDPYVSP 79 (184)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSCH
T ss_pred cceeeeeccccchhHHHHHHhhhccc-eEEeecCCCCh
Confidence 46799999999999999999999999 99999876544
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=91.24 E-value=0.1 Score=43.45 Aligned_cols=35 Identities=20% Similarity=0.280 Sum_probs=31.1
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.+.|+|+|+|..|+.++..+...|. +|++++.++.
T Consensus 2 ~KKI~IIGaG~sGL~aA~~L~k~G~-~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDH 36 (314)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSS
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCC-CEEEEECCCC
Confidence 4689999999999999999888898 9999988765
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=91.14 E-value=0.14 Score=41.09 Aligned_cols=32 Identities=22% Similarity=0.399 Sum_probs=27.9
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+|||+|+ |-+|...+..++..|+ .|+++++.+
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~-~Vi~~~r~~ 35 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNV-EVIPTDVQD 35 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSE-EEEEECTTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCC-EEEEeechh
Confidence 5899998 9999999999988999 899997653
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.05 E-value=0.11 Score=40.18 Aligned_cols=31 Identities=26% Similarity=0.357 Sum_probs=28.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|..|+.++..+...|. +|.+++.++
T Consensus 8 viViGaG~~Gl~~A~~La~~G~-~V~vlE~~~ 38 (297)
T d2bcgg1 8 VIVLGTGITECILSGLLSVDGK-KVLHIDKQD 38 (297)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEcCCC
Confidence 7889999999999988889998 899998875
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=90.99 E-value=0.11 Score=40.92 Aligned_cols=35 Identities=31% Similarity=0.322 Sum_probs=30.8
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
+++||+|+ +++|.+.++.+...|+ +|+.+++++++
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga-~V~i~~~~~~~ 37 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGY-RVVVLDLRREG 37 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTC-EEEEEESSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCccc
Confidence 67899987 9999999998889999 89999988764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=90.95 E-value=0.5 Score=39.22 Aligned_cols=38 Identities=26% Similarity=0.263 Sum_probs=31.6
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
+.++|+|+|+ |.+|...+..+...|+ +|+++.++..+.
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~-~V~~l~R~~~~~ 40 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGH-HVRAQVHSLKGL 40 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCSCSH
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCC-eEEEEECCcchh
Confidence 4578999988 9999999998888999 788887766543
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=90.89 E-value=0.21 Score=36.95 Aligned_cols=40 Identities=18% Similarity=0.120 Sum_probs=33.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
++...|.|+|+|.+|...+.++...+...++.+|.++++.
T Consensus 5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~ 44 (154)
T d1pzga1 5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMP 44 (154)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccc
Confidence 4557899999999999888888888877899999888654
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=90.87 E-value=0.12 Score=40.14 Aligned_cols=36 Identities=33% Similarity=0.421 Sum_probs=32.1
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.+++|.|+|.|.+|..++++++.+|. +|++.++...
T Consensus 44 ~~ktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~ 79 (199)
T d1dxya1 44 GQQTVGVMGTGHIGQVAIKLFKGFGA-KVIAYDPYPM 79 (199)
T ss_dssp GGSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCC
T ss_pred cceeeeeeecccccccccccccccce-eeeccCCccc
Confidence 46799999999999999999999999 9999987543
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=90.87 E-value=1.2 Score=33.28 Aligned_cols=90 Identities=22% Similarity=0.244 Sum_probs=50.7
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC-C-hhhHHHHHhcCCCEEeCCCCCCchHHH-------HHHhhcCCCccE
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI-D-PKKFDRAKNFGVTEFVNPKDHDKPIQQ-------VLVDLTDGGVDY 267 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~-~-~~~~~~~~~~ga~~~i~~~~~~~~~~~-------~v~~~~~gg~d~ 267 (291)
+|.|.|-|.+|..+..++...+--.++++.. + ......+..++.+......+....+.+ .+.++. .++|+
T Consensus 3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~vDv 81 (171)
T d1cf2o1 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEADI 81 (171)
T ss_dssp EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTCSE
T ss_pred EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHHhcCCceEecccccceeecccCcccCCChhHhh-cCCCE
Confidence 6889999999999888776554225665432 2 234455556665543322221000000 011111 26999
Q ss_pred EEEcCCChHHHHHHHHHhhc
Q 022865 268 SFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 268 v~d~~g~~~~~~~~~~~l~~ 287 (291)
|+||+|.-...+.+-..+..
T Consensus 82 ViEcTG~f~~~~~~~~hl~~ 101 (171)
T d1cf2o1 82 VIDCTPEGIGAKNLKMYKEK 101 (171)
T ss_dssp EEECCSTTHHHHHHHHHHHT
T ss_pred EEEccCCCCCHHHHHHHHHc
Confidence 99999986666666555543
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=90.84 E-value=0.11 Score=41.48 Aligned_cols=33 Identities=27% Similarity=0.291 Sum_probs=29.1
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
-|+|+|+|+.|++++..+...|. +|++++..++
T Consensus 6 DViIIGaG~aGl~aA~~la~~G~-~V~vlEk~~~ 38 (253)
T d2gqfa1 6 ENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKK 38 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred cEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence 38899999999999988888998 8999988764
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=90.78 E-value=0.11 Score=40.99 Aligned_cols=32 Identities=44% Similarity=0.543 Sum_probs=28.1
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
|+|+|+|+.|++++..+...|. +|+.++..+.
T Consensus 5 ViIIGaG~aGl~aA~~la~~G~-~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNK 36 (251)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence 7899999999998888888999 8999987653
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=90.71 E-value=0.48 Score=36.79 Aligned_cols=90 Identities=14% Similarity=0.145 Sum_probs=55.6
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHH---cCCCeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhhcCCC
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKA---AGASRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDLTDGG 264 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~---~g~~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~~~gg 264 (291)
++++.+||=+|+|. |..+..+++. .++ +|+++|.+++-++.+++. +....+.... .+ ..+.....
T Consensus 37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~-~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~--~d----~~~~~~~~ 108 (225)
T d1im8a_ 37 VTADSNVYDLGCSR-GAATLSARRNINQPNV-KIIGIDNSQPMVERCRQHIAAYHSEIPVEILC--ND----IRHVEIKN 108 (225)
T ss_dssp CCTTCEEEEESCTT-CHHHHHHHHTCCCSSC-EEEEECSCHHHHHHHHHHHHTSCCSSCEEEEC--SC----TTTCCCCS
T ss_pred cCCCCEEEEeccch-hhHHHHHHHhhcCCCC-ceEEeCCCHHHHHHHHHHhHhhcccchhhhcc--ch----hhcccccc
Confidence 67889999999865 6677777775 366 999999999988888652 2221111000 00 11222235
Q ss_pred ccEEEEcCC--------ChHHHHHHHHHhhccC
Q 022865 265 VDYSFECIG--------NVSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g--------~~~~~~~~~~~l~~~g 289 (291)
+|+++-+.. ....++.+.+.|+++|
T Consensus 109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG 141 (225)
T d1im8a_ 109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNG 141 (225)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEE
T ss_pred ceeeEEeeeccccChhhHHHHHHHHHHhCCCCc
Confidence 676655322 1256888888888883
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=90.70 E-value=0.16 Score=38.73 Aligned_cols=36 Identities=44% Similarity=0.637 Sum_probs=32.7
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|++|.|+|.|.+|...+++++.+|. +|++.++...
T Consensus 41 ~gk~vgIiG~G~IG~~va~~l~~~g~-~v~~~d~~~~ 76 (181)
T d1qp8a1 41 QGEKVAVLGLGEIGTRVGKILAALGA-QVRGFSRTPK 76 (181)
T ss_dssp TTCEEEEESCSTHHHHHHHHHHHTTC-EEEEECSSCC
T ss_pred cCceEEEeccccccccceeeeecccc-cccccccccc
Confidence 47899999999999999999999999 9999987653
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=90.68 E-value=0.056 Score=41.31 Aligned_cols=34 Identities=24% Similarity=0.167 Sum_probs=29.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
++..|+|+|+|+.|+.|+..+..+|. +|+.+++.
T Consensus 4 k~~dVvIIGGGpaGl~AA~~~ar~g~-~v~iie~~ 37 (190)
T d1trba1 4 KHSKLLILGSGPAGYTAAVYAARANL-QPVLITGM 37 (190)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHHcCC-ceEEEEee
Confidence 34579999999999999999999999 78887654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=90.67 E-value=0.18 Score=35.61 Aligned_cols=37 Identities=27% Similarity=0.290 Sum_probs=31.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
+.+++++|+|+|.+|+-+++.+..+|. +|+.+.+.+.
T Consensus 30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~-~Vtlv~~~~~ 66 (122)
T d1xhca2 30 ENSGEAIIIGGGFIGLELAGNLAEAGY-HVKLIHRGAM 66 (122)
T ss_dssp HHHSEEEEEECSHHHHHHHHHHHHTTC-EEEEECSSSC
T ss_pred hcCCcEEEECCcHHHHHHHHHhhcccc-eEEEEecccc
Confidence 345789999999999999999999999 8998877653
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=90.65 E-value=0.16 Score=42.35 Aligned_cols=90 Identities=20% Similarity=0.187 Sum_probs=58.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC----------C-EEeCCCCCCchHHHHHHhhc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV----------T-EFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga----------~-~~i~~~~~~~~~~~~v~~~~ 261 (291)
...++|||+|.|. |..+-++++.....+|.+++.+++-.+.++++-. . .++. .+..+.+.+ +
T Consensus 76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~-----~Da~~~l~~-~ 148 (312)
T d1uira_ 76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVI-----DDARAYLER-T 148 (312)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEE-----SCHHHHHHH-C
T ss_pred CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEE-----chHHHHhhh-c
Confidence 3457999998765 6666677777766699999999998888876421 0 1111 234455554 3
Q ss_pred CCCccEEE-EcC---C---------ChHHHHHHHHHhhccC
Q 022865 262 DGGVDYSF-ECI---G---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 262 ~gg~d~v~-d~~---g---------~~~~~~~~~~~l~~~g 289 (291)
...+|+|| |.. + +.+.++.+.+.|+++|
T Consensus 149 ~~~yDvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~G 189 (312)
T d1uira_ 149 EERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGG 189 (312)
T ss_dssp CCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEE
T ss_pred CCcccEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCc
Confidence 44899776 432 2 1345677888888884
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=90.41 E-value=0.046 Score=42.24 Aligned_cols=93 Identities=15% Similarity=0.151 Sum_probs=56.7
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC--EE-eCCCCCCchHHHHHH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT--EF-VNPKDHDKPIQQVLV 258 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~--~~-i~~~~~~~~~~~~v~ 258 (291)
+.......++++||=+|+|. |..++.+++ .+. +|+++|.++...+.+++ .+.. .+ +...+ + ..
T Consensus 44 Li~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~-~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d----~---~~ 113 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLGCGY-GVIGIALAD-EVK-STTMADINRRAIKLAKENIKLNNLDNYDIRVVHSD----L---YE 113 (194)
T ss_dssp HHHHCCCCTTCEEEEETCTT-SHHHHHHGG-GSS-EEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECS----T---TT
T ss_pred HHHhCCcCCCCeEEEEeecC-ChhHHHHHh-hcc-ccceeeeccccchhHHHHHHHhCCccceEEEEEcc----h---hh
Confidence 34556678899999998755 566666665 344 89999999988877754 2221 11 11111 1 11
Q ss_pred hhcCCCccEEEEcC----CC---hHHHHHHHHHhhcc
Q 022865 259 DLTDGGVDYSFECI----GN---VSVMRAALECCHKV 288 (291)
Q Consensus 259 ~~~~gg~d~v~d~~----g~---~~~~~~~~~~l~~~ 288 (291)
...++.||+|+-.. +. ...++.+.+.|+++
T Consensus 114 ~~~~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~Lkpg 150 (194)
T d1dusa_ 114 NVKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDN 150 (194)
T ss_dssp TCTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEE
T ss_pred hhccCCceEEEEcccEEecchhhhhHHHHHHHhcCcC
Confidence 12234799888632 21 23467777888887
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.40 E-value=0.12 Score=39.97 Aligned_cols=31 Identities=26% Similarity=0.284 Sum_probs=27.4
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|+.|+.++..+..+|. +|++++..+
T Consensus 6 vvVIGgGpaGl~aA~~aa~~G~-kV~vie~~~ 36 (221)
T d1dxla1 6 VVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRG 36 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHHTC-CEEEEECSS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence 7888999999999999999999 888887653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=90.37 E-value=0.43 Score=38.04 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=29.8
Q ss_pred CCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 195 GSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 195 g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
-++|||+|+ |-+|...+..+...|. +|++++++..
T Consensus 3 kkKILVtGatG~iG~~l~~~L~~~G~-~V~~l~R~~~ 38 (307)
T d1qyca_ 3 RSRILLIGATGYIGRHVAKASLDLGH-PTFLLVREST 38 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTC-CEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEECCCc
Confidence 357999998 9999999999988998 8999887653
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=90.35 E-value=0.095 Score=41.92 Aligned_cols=32 Identities=34% Similarity=0.456 Sum_probs=28.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
+|+|+|+|..|+.++..+...|+ +|++++.++
T Consensus 2 ~V~IIGaG~aGL~aA~~L~~~G~-~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGGGISGLAVAHHLRSRGT-DAVLLESSA 33 (347)
T ss_dssp CEEEECCBHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 48999999999999999999999 899998754
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=90.33 E-value=0.98 Score=31.71 Aligned_cols=75 Identities=15% Similarity=0.079 Sum_probs=51.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCChH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNVS 276 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~~ 276 (291)
.++|.|.|.+|...+..++ +. .|++++.++++.+.++..|... +.-+. .-.+.+++..-..++.++-++.++.
T Consensus 2 HivI~G~g~~g~~l~~~L~--~~-~i~vi~~d~~~~~~~~~~~~~~-i~Gd~---~~~~~L~~a~i~~A~~vi~~~~~d~ 74 (129)
T d2fy8a1 2 HVVICGWSESTLECLRELR--GS-EVFVLAEDENVRKKVLRSGANF-VHGDP---TRVSDLEKANVRGARAVIVNLESDS 74 (129)
T ss_dssp CEEEESCCHHHHHHHHTSC--GG-GEEEEESCTTHHHHHHHTTCEE-EESCT---TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred EEEEECCCHHHHHHHHHHc--CC-CCEEEEcchHHHHHHHhcCccc-ccccc---CCHHHHHHhhhhcCcEEEEeccchh
Confidence 5788899999987777653 44 6788889999988888887643 33222 2234455543337898988888755
Q ss_pred HH
Q 022865 277 VM 278 (291)
Q Consensus 277 ~~ 278 (291)
.-
T Consensus 75 ~n 76 (129)
T d2fy8a1 75 ET 76 (129)
T ss_dssp HH
T ss_pred hh
Confidence 43
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.16 E-value=0.16 Score=41.72 Aligned_cols=44 Identities=25% Similarity=0.283 Sum_probs=33.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGV 240 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga 240 (291)
++|||+|+ |-+|...+..+...|+ +|+++++... +.+.++++..
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~-~V~~~~r~~~~~~~~~l~~~~~ 47 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGY-RVHGLVARRSSDTRWRLRELGI 47 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCCSSCCCHHHHHTTC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcC-EEEEEECCCCcccHHHHHHhcc
Confidence 48999998 9999999988888899 8999887543 2344444443
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.14 E-value=0.45 Score=37.30 Aligned_cols=98 Identities=15% Similarity=0.104 Sum_probs=62.4
Q ss_pred hcCCCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHHh----cCCCEEeCCCCCCchHHHHHH----h
Q 022865 189 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAKN----FGVTEFVNPKDHDKPIQQVLV----D 259 (291)
Q Consensus 189 ~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~v~----~ 259 (291)
..+....++||-+|.+. |+.++.+|+++. -.+|+.++.+++..+.+++ .|....+.... .+..+.+. .
T Consensus 54 L~~~~~~k~vLEiGt~~-GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~--Gda~e~l~~~~~~ 130 (219)
T d2avda1 54 LARLIQAKKALDLGTFT-GYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRL--KPALETLDELLAA 130 (219)
T ss_dssp HHHHTTCCEEEEECCTT-SHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEE--SCHHHHHHHHHHT
T ss_pred HHHccCCCeEEEEechh-hHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEE--eehhhcchhhhhh
Confidence 34445668999999754 778888888773 2399999999998777754 35433222221 12222232 2
Q ss_pred hcCCCccEEEEcCCC---hHHHHHHHHHhhccC
Q 022865 260 LTDGGVDYSFECIGN---VSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~~gg~d~v~d~~g~---~~~~~~~~~~l~~~g 289 (291)
...+.||+||--... ...++.+++.|++||
T Consensus 131 ~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GG 163 (219)
T d2avda1 131 GEAGTFDVAVVDADKENCSAYYERCLQLLRPGG 163 (219)
T ss_dssp TCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEE
T ss_pred cccCCccEEEEeCCHHHHHHHHHHHHHHhcCCc
Confidence 233479988765443 345778899999884
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=90.10 E-value=0.13 Score=38.52 Aligned_cols=30 Identities=27% Similarity=0.199 Sum_probs=26.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
-|+|+|+|+.|+.|+..+...|. +|+.++.
T Consensus 3 DViIIGgGpaGl~AAi~aar~G~-~v~iie~ 32 (184)
T d1fl2a1 3 DVLIVGSGPAGAAAAIYSARKGI-RTGLMGE 32 (184)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTC-CEEEECS
T ss_pred cEEEECcCHHHHHHHHHHHHcCC-eEEEEEE
Confidence 37899999999999999999999 7888864
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=90.10 E-value=0.24 Score=39.17 Aligned_cols=84 Identities=14% Similarity=0.149 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCCCCchHHHHHHhhc-CCCcc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKDHDKPIQQVLVDLT-DGGVD 266 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~~~~~~~~~v~~~~-~gg~d 266 (291)
.++++||=+|+|. |..+..+++ .|. +|+++|.+++-++.+++ .+... ++.. + +.++. .+.||
T Consensus 36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~-~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~-d--------~~~~~~~~~fD 103 (246)
T d1y8ca_ 36 LVFDDYLDLACGT-GNLTENLCP-KFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQ-D--------ISNLNINRKFD 103 (246)
T ss_dssp CCTTEEEEETCTT-STTHHHHGG-GSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECC-C--------GGGCCCSCCEE
T ss_pred CCCCeEEEEeCcC-CHHHHHHHH-hCC-ccEeeccchhhhhhccccccccCccceeecc-c--------hhhhccccccc
Confidence 3457899899875 677777775 577 89999999998777654 33322 2221 1 12222 34799
Q ss_pred EEEEcCC------Ch----HHHHHHHHHhhcc
Q 022865 267 YSFECIG------NV----SVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~g------~~----~~~~~~~~~l~~~ 288 (291)
+|+...+ +. ..++.+.+.|+++
T Consensus 104 ~i~~~~~~~~~~~~~~~~~~~l~~~~~~Lkpg 135 (246)
T d1y8ca_ 104 LITCCLDSTNYIIDSDDLKKYFKAVSNHLKEG 135 (246)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHTTEEEE
T ss_pred ccceeeeeeeccCCHHHHHHHHHHHHHhCCCC
Confidence 9986433 22 2456666777777
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=90.09 E-value=0.053 Score=41.04 Aligned_cols=76 Identities=16% Similarity=0.223 Sum_probs=45.2
Q ss_pred EEEEEcCChHHHHHHHHHHHc-CCCeEEE-EcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAA-GASRVIG-IDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGN 274 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~-g~~~v~~-~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~ 274 (291)
+|.|+|.|.+|...+...+.. ++ .+++ .++++++.+ .. ....+. + .... ...+|+|+.|+++
T Consensus 5 rvgiiG~G~ig~~~~~~l~~~~~~-elvav~~~~~~~~~---~~---~~~~~~----~----~~~~-~~~~D~Vvi~tp~ 68 (170)
T d1f06a1 5 RVAIVGYGNLGRSVEKLIAKQPDM-DLVGIFSRRATLDT---KT---PVFDVA----D----VDKH-ADDVDVLFLCMGS 68 (170)
T ss_dssp EEEEECCSHHHHHHHHHHTTCSSE-EEEEEEESSSCCSS---SS---CEEEGG----G----GGGT-TTTCSEEEECSCT
T ss_pred eEEEECChHHHHHHHHHHHhCCCc-EEEEEEeccccccc---cc---ccccch----h----hhhh-ccccceEEEeCCC
Confidence 689999999998877777665 56 5555 444433211 11 111111 1 1111 1257888888887
Q ss_pred hHHHHHHHHHhhcc
Q 022865 275 VSVMRAALECCHKV 288 (291)
Q Consensus 275 ~~~~~~~~~~l~~~ 288 (291)
...++.+.++|+.|
T Consensus 69 ~~h~~~a~~aL~aG 82 (170)
T d1f06a1 69 ATDIPEQAPKFAQF 82 (170)
T ss_dssp TTHHHHHHHHHTTT
T ss_pred cccHHHHHHHHHCC
Confidence 77777887777664
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=90.03 E-value=0.43 Score=36.39 Aligned_cols=37 Identities=19% Similarity=0.138 Sum_probs=32.6
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKK 231 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~ 231 (291)
.+.++.|+|.|.+|...++.++.+|. +|+..++....
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~~ 79 (188)
T d2naca1 43 EAMHVGTVAAGRIGLAVLRRLAPFDV-HLHYTDRHRLP 79 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHGGGTC-EEEEECSSCCC
T ss_pred cccceeeccccccchhhhhhhhccCc-eEEEEeecccc
Confidence 57899999999999999999999999 89999875433
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.03 E-value=0.15 Score=40.25 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=38.6
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
....+.++.+||.+|+|. |..+..+|+ .|+ +|+++|.+++-++.+++
T Consensus 39 ~~l~~~~~~rvLd~GCG~-G~~a~~LA~-~G~-~V~gvD~S~~ai~~a~~ 85 (229)
T d2bzga1 39 TFLKGKSGLRVFFPLCGK-AVEMKWFAD-RGH-SVVGVEISELGIQEFFT 85 (229)
T ss_dssp HHHTTCCSCEEEETTCTT-CTHHHHHHH-TTC-EEEEECSCHHHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCC-cHHHHHHHh-CCC-cEEEEeCCHHHHHHHHH
Confidence 445567889999999877 777878875 699 99999999998887764
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=89.98 E-value=0.23 Score=41.63 Aligned_cols=74 Identities=20% Similarity=0.261 Sum_probs=44.9
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+.-+|||+|+ |-+|...+..+...|. .|+++++.+.... ............+- .+... +.+.. .++|.|+.++
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~-~V~~~d~~~~~~~-~~~~~~~~~~~~D~--~~~~~-~~~~~-~~~d~Vih~a 87 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGH-YVIASDWKKNEHM-TEDMFCDEFHLVDL--RVMEN-CLKVT-EGVDHVFNLA 87 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCSSS-CGGGTCSEEEECCT--TSHHH-HHHHH-TTCSEEEECC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcC-EEEEEeCCCccch-hhhcccCcEEEeec--hhHHH-HHHHh-hcCCeEeecc
Confidence 3557999987 9999999999999998 8999876543211 11122222222221 12222 22222 2689999987
Q ss_pred C
Q 022865 273 G 273 (291)
Q Consensus 273 g 273 (291)
+
T Consensus 88 ~ 88 (363)
T d2c5aa1 88 A 88 (363)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=89.84 E-value=0.55 Score=35.10 Aligned_cols=43 Identities=23% Similarity=0.239 Sum_probs=35.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
.|-|+|.|.+|...+.-+...|+ +|++.++++++.+.+.+.++
T Consensus 3 kIGvIGlG~MG~~ma~~L~~~G~-~V~~~dr~~~~~~~l~~~~~ 45 (178)
T d1pgja2 3 DVGVVGLGVMGANLALNIAEKGF-KVAVFNRTYSKSEEFMKANA 45 (178)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEECSSHHHHHHHHHHTT
T ss_pred EEEEEeehHHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHcCC
Confidence 37789999999988877778899 89999999999887765543
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=89.74 E-value=0.18 Score=38.85 Aligned_cols=36 Identities=42% Similarity=0.457 Sum_probs=32.2
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|++|.|+|.|.+|...+++++.+|+ +|++.++...
T Consensus 48 ~gktvgIiG~G~IG~~va~~l~~fg~-~v~~~d~~~~ 83 (193)
T d1mx3a1 48 RGETLGIIGLGRVGQAVALRAKAFGF-NVLFYDPYLS 83 (193)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTC-EEEEECTTSC
T ss_pred eCceEEEeccccccccceeeeecccc-ceeeccCccc
Confidence 57899999999999999999999999 8999887543
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.67 E-value=0.23 Score=41.02 Aligned_cols=45 Identities=27% Similarity=0.481 Sum_probs=33.4
Q ss_pred hhhhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 186 VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
+.+.....++++||-+|+| .|+.++.+|+ +|+++|++++.++.-.
T Consensus 27 i~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~ 71 (311)
T d2fyta1 27 IYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILY 71 (311)
T ss_dssp HHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHH
T ss_pred HHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHH
Confidence 4444566789999999987 4666666665 5877999999988643
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=89.56 E-value=1 Score=31.97 Aligned_cols=87 Identities=18% Similarity=0.309 Sum_probs=53.2
Q ss_pred CCCEEEEEcCChH--H------HHHHHHHH---HcCCCeEEEEcCChhhHHHHHhcCCCEEeC-CCCCCchHHHHHHhhc
Q 022865 194 PGSIVAVFGLGTV--G------LAVAEGAK---AAGASRVIGIDIDPKKFDRAKNFGVTEFVN-PKDHDKPIQQVLVDLT 261 (291)
Q Consensus 194 ~g~~vlI~G~g~v--G------~~ai~~a~---~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~-~~~~~~~~~~~v~~~~ 261 (291)
.-++|||+|+|+. | ++++|.++ ..|+ +++.+.++++....-..+ +|.++- .-. .+.+.+.++.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~-~~iliN~NP~TVstd~d~-aD~lYfePlt-~e~v~~Ii~~-- 80 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGY-RVINVNSNPATIMTDPEM-ADATYIEPIH-WEVVRKIIEK-- 80 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTC-EEEEECSCTTCGGGCGGG-SSEEECSCCC-HHHHHHHHHH--
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCC-eEEEecCchHhhhcChhh-cceeeeecCC-HHHHHHHHHH--
Confidence 3478999988642 2 55555554 5599 899998988864332233 344332 211 1222222222
Q ss_pred CCCccEEEEcCCChHHHHHHHHHhh
Q 022865 262 DGGVDYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 262 ~gg~d~v~d~~g~~~~~~~~~~~l~ 286 (291)
...|.|+-..|+-..++.++++.+
T Consensus 81 -E~pd~il~~~GGQtalnla~~L~~ 104 (127)
T d1a9xa3 81 -ERPDAVLPTMGGQTALNCALELER 104 (127)
T ss_dssp -HCCSEEECSSSHHHHHHHHHHHHH
T ss_pred -hCcCCeEEEeeeehHhHHHHHHHH
Confidence 278999999998777888877654
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=89.54 E-value=0.16 Score=41.96 Aligned_cols=33 Identities=27% Similarity=0.234 Sum_probs=29.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|+|+|+|..|++++..++..|. .+++++..++
T Consensus 9 dV~IIGAG~sGl~~a~~L~~~G~-~v~i~Ek~~~ 41 (298)
T d1w4xa1 9 DVLVVGAGFSGLYALYRLRELGR-SVHVIETAGD 41 (298)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSS
T ss_pred CEEEECccHHHHHHHHHHHhCCC-CEEEEEcCCC
Confidence 58999999999999999999999 8999987754
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.39 E-value=0.11 Score=42.98 Aligned_cols=31 Identities=23% Similarity=0.274 Sum_probs=27.4
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
++|||+|+ |-+|...+..+...|. +|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~-~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGH-EVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeC
Confidence 58999998 9999999988888898 8999875
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.37 E-value=0.55 Score=38.37 Aligned_cols=91 Identities=14% Similarity=0.110 Sum_probs=57.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC---------CEEeCCCCCCchHHHHHHhhcCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV---------TEFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga---------~~~i~~~~~~~~~~~~v~~~~~g 263 (291)
...++|||+|+|. |..+-.+++..+..+|++++-+++-.+.++++-. ..-+.. .+..+.++. +..
T Consensus 77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~----~Da~~~l~~-~~~ 150 (285)
T d2o07a1 77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHV----GDGFEFMKQ-NQD 150 (285)
T ss_dssp SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEE----SCHHHHHHT-CSS
T ss_pred cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEE----ccHHHHHhc-CCC
Confidence 3457999998765 5566677777777799999999999999877531 111111 133444544 334
Q ss_pred CccEEE-EcCC---------ChHHHHHHHHHhhccC
Q 022865 264 GVDYSF-ECIG---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 264 g~d~v~-d~~g---------~~~~~~~~~~~l~~~g 289 (291)
.+|+|+ |... +.+.++.+.+.|+++|
T Consensus 151 ~yDvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~G 186 (285)
T d2o07a1 151 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDG 186 (285)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEE
T ss_pred CCCEEEEcCCCCCCcccccccHHHHHHHHHhcCCCC
Confidence 899666 4322 2244677777888773
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.32 E-value=0.32 Score=37.52 Aligned_cols=40 Identities=38% Similarity=0.633 Sum_probs=34.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+|.|+|.|-+|+..+..+...|. +|+++|.++++.+.+.+
T Consensus 2 kI~ViGlG~vGl~~a~~la~~g~-~V~g~D~n~~~i~~ln~ 41 (202)
T d1mv8a2 2 RISIFGLGYVGAVCAGCLSARGH-EVIGVDVSSTKIDLINQ 41 (202)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHhHHHHHHHHHhCCC-cEEEEeCCHHHHHHhcc
Confidence 47889999999998877778898 99999999998877654
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=89.24 E-value=0.16 Score=39.33 Aligned_cols=30 Identities=23% Similarity=0.285 Sum_probs=27.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
|+|+|+|+.|+.++..|..+|. +|..++..
T Consensus 5 vvVIG~G~aG~~aA~~a~~~G~-kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGGGSGGIASINRAAMYGQ-KCALIEAK 34 (217)
T ss_dssp EEEECCSHHHHHHHHHHHTTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 7889999999999999999999 88888764
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=89.08 E-value=0.23 Score=39.54 Aligned_cols=34 Identities=32% Similarity=0.480 Sum_probs=30.6
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
..+|+|+|+|++|..++..+..+|.++++.+|.+
T Consensus 30 ~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence 3689999999999999999999999999998754
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=89.02 E-value=0.19 Score=38.99 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=27.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|+.|+.|+..|..+|. +|+.++..+
T Consensus 8 viVIG~GpAGl~aA~~aa~~G~-kV~lie~~~ 38 (233)
T d1v59a1 8 VVIIGGGPAGYVAAIKAAQLGF-NTACVEKRG 38 (233)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-cEEEEEecC
Confidence 7889999999999988889999 888887654
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=88.96 E-value=0.19 Score=39.06 Aligned_cols=31 Identities=19% Similarity=0.227 Sum_probs=27.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
.++|+|+|+.|+.++..+..+|. +|+.++..
T Consensus 7 DlvVIG~GpaGl~aA~~aa~~G~-~V~liE~~ 37 (220)
T d1lvla1 7 TLLIIGGGPGGYVAAIRAGQLGI-PTVLVEGQ 37 (220)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTC-CEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEecC
Confidence 37889999999999999999999 89999764
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=88.92 E-value=0.21 Score=38.54 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=26.8
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
++|+|+|+.|+.++..|..+|. +|+.++..
T Consensus 6 viVIG~GpaGl~aA~~aar~G~-kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG 35 (223)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecC
Confidence 7788999999999999999999 88888765
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.86 E-value=0.34 Score=35.76 Aligned_cols=36 Identities=28% Similarity=0.277 Sum_probs=30.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
-+++|+|+|+|.+|.=++..+..+|++.|+.+.+.+
T Consensus 44 ~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 356899999999999999999999998888876543
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=88.78 E-value=0.96 Score=33.16 Aligned_cols=79 Identities=15% Similarity=0.117 Sum_probs=51.4
Q ss_pred EEEEEcCChHHHH-HHHHHHHc-CCCeEEE-EcCChhhH-HHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcC
Q 022865 197 IVAVFGLGTVGLA-VAEGAKAA-GASRVIG-IDIDPKKF-DRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECI 272 (291)
Q Consensus 197 ~vlI~G~g~vG~~-ai~~a~~~-g~~~v~~-~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~ 272 (291)
+|.|+|.|.+|.- .+...+.. ++ .+++ .+.++++. +++++++.+. .+ .+. .+. ..+|+|+-|+
T Consensus 3 ri~iIG~G~~g~~~~~~~l~~~~~~-~i~~v~d~~~~~~~~~~~~~~~~~-~~------~~~-~l~----~~~D~V~I~t 69 (164)
T d1tlta1 3 RIGVVGLGGIAQKAWLPVLAAASDW-TLQGAWSPTRAKALPICESWRIPY-AD------SLS-SLA----ASCDAVFVHS 69 (164)
T ss_dssp EEEEECCSTHHHHTHHHHHHSCSSE-EEEEEECSSCTTHHHHHHHHTCCB-CS------SHH-HHH----TTCSEEEECS
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc-EEEEEEechhHhhhhhhhcccccc-cc------cch-hhh----hhcccccccc
Confidence 6889999999864 45555554 56 5554 56666654 4456777642 11 121 222 2489999999
Q ss_pred CChHHHHHHHHHhhcc
Q 022865 273 GNVSVMRAALECCHKV 288 (291)
Q Consensus 273 g~~~~~~~~~~~l~~~ 288 (291)
.+......+..+|..+
T Consensus 70 p~~~h~~~~~~al~~g 85 (164)
T d1tlta1 70 STASHFDVVSTLLNAG 85 (164)
T ss_dssp CTTHHHHHHHHHHHTT
T ss_pred cchhcccccccccccc
Confidence 9888888888887654
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=88.77 E-value=1.4 Score=33.03 Aligned_cols=84 Identities=12% Similarity=0.097 Sum_probs=48.0
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh--hHHHHHhcCCCEEeCCCCC------CchHHHHHHhhcCCCccEE
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK--KFDRAKNFGVTEFVNPKDH------DKPIQQVLVDLTDGGVDYS 268 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~--~~~~~~~~ga~~~i~~~~~------~~~~~~~v~~~~~gg~d~v 268 (291)
.|.|+|+|..|.+.+..+...|. .|+...+..+ ..+...+-.-...+..... ..+..+.+. .+|+|
T Consensus 2 kI~ViGaG~~GtalA~~la~~g~-~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~ad~I 75 (180)
T d1txga2 2 IVSILGAGAMGSALSVPLVDNGN-EVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE-----NAEVV 75 (180)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCC-EEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-----TCSEE
T ss_pred EEEEECCCHHHHHHHHHHHHCCC-EEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHh-----ccchh
Confidence 57899999999988887777787 8888766433 2222222111000000000 112222222 58999
Q ss_pred EEcCCChHHHHHHHHHhhc
Q 022865 269 FECIGNVSVMRAALECCHK 287 (291)
Q Consensus 269 ~d~~g~~~~~~~~~~~l~~ 287 (291)
+.++.... ++..++-+.+
T Consensus 76 i~avps~~-~~~~~~~l~~ 93 (180)
T d1txga2 76 LLGVSTDG-VLPVMSRILP 93 (180)
T ss_dssp EECSCGGG-HHHHHHHHTT
T ss_pred hcccchhh-hHHHHHhhcc
Confidence 99999754 6666665554
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=88.69 E-value=0.22 Score=38.93 Aligned_cols=31 Identities=29% Similarity=0.315 Sum_probs=27.8
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|+.|+.++..+..+|. +|+.++..+
T Consensus 9 viIIG~GPaGlsaA~~aa~~G~-~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGGGPGGYSAAFAAADEGL-KVAIVERYK 39 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence 7888999999999999999999 899997654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=88.69 E-value=0.24 Score=39.61 Aligned_cols=34 Identities=35% Similarity=0.432 Sum_probs=30.4
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
-+|.+|+|.|.|.+|..+++++..+|+ +|++++.
T Consensus 29 l~g~~v~IqGfGnVG~~~a~~L~~~Ga-kvv~vsD 62 (242)
T d1v9la1 29 IEGKTVAIQGMGNVGRWTAYWLEKMGA-KVIAVSD 62 (242)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEEC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEeec
Confidence 368899999999999999999999999 8887653
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=88.58 E-value=2.3 Score=34.33 Aligned_cols=100 Identities=18% Similarity=0.215 Sum_probs=64.8
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCCEEeCCCC-----------------
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKD----------------- 248 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~--~~~~~~~~~~~~ga~~~i~~~~----------------- 248 (291)
+....+++.+++.-++|.-|.+++..++.+|.+-++.+. .++.+....+.+|++.+.....
T Consensus 54 ~~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~ 133 (302)
T d1fcja_ 54 KRGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLKALGANLVLTEGAKGMKGAIQKAEEIVASD 133 (302)
T ss_dssp HHTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHTS
T ss_pred HcCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHHHhccceEEeccccccchhhhHHHHHHhhh
Confidence 445566777766667799999999999999986555543 3345677778888854321111
Q ss_pred ----------CC--------chHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 249 ----------HD--------KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 249 ----------~~--------~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
++ ..+..++.+..++.+|.+|-++|+-.++.-....++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk~ 190 (302)
T d1fcja_ 134 PQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIKG 190 (302)
T ss_dssp TTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHT
T ss_pred ccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeeee
Confidence 01 1123445555555789999999987766666665554
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.53 E-value=0.19 Score=41.14 Aligned_cols=31 Identities=29% Similarity=0.411 Sum_probs=27.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|..|+.++..++..|. +|++++.++
T Consensus 2 ViVIGaG~aGL~aA~~L~~~G~-~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVGGGISGMAAAKLLHDSGL-NVVVLEARD 32 (383)
T ss_dssp EEEECCBHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred EEEECCCHHHHHHHHHHHhCCC-CEEEEecCC
Confidence 7889999999999999999999 899997654
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=88.41 E-value=0.52 Score=34.33 Aligned_cols=39 Identities=31% Similarity=0.238 Sum_probs=31.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHH
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRA 235 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~ 235 (291)
.|.|+|+ |.+|...+.++...+. ..++.+|.++.+.+..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~ 42 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA 42 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH
Confidence 6889997 9999999998888875 6899999887664443
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=88.32 E-value=0.66 Score=33.01 Aligned_cols=75 Identities=8% Similarity=0.077 Sum_probs=47.8
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCCCh
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIGNV 275 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g~~ 275 (291)
+|.|+|+ |.+|.+..+++...+..-+..++.+.... . -.+|-++|... ++...+.+......+.-+|+-++|-.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~--~--~~~DVvIDFS~-p~~~~~~l~~~~~~~~p~ViGTTG~~ 76 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE--L--DSPDVVIDFSS-PEALPKTVDLCKKYRAGLVLGTTALK 76 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE--C--SCCSEEEECSC-GGGHHHHHHHHHHHTCEEEECCCSCC
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH--h--ccCCEEEEecC-HHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 5889997 99999999999999984444455443210 0 23566777665 23334444433323677899888853
Q ss_pred H
Q 022865 276 S 276 (291)
Q Consensus 276 ~ 276 (291)
.
T Consensus 77 ~ 77 (128)
T d1vm6a3 77 E 77 (128)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=88.20 E-value=0.21 Score=36.49 Aligned_cols=41 Identities=12% Similarity=-0.087 Sum_probs=27.7
Q ss_pred EEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC
Q 022865 199 AVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV 240 (291)
Q Consensus 199 lI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga 240 (291)
-++|+|.+|...++.++..+. .+.+.+++.++.+.+.+.+.
T Consensus 3 gfIG~G~mg~~l~~~L~~~~~-~~~v~~R~~~~~~~l~~~~~ 43 (153)
T d2i76a2 3 NFVGTGTLTRFFLECLKDRYE-IGYILSRSIDRARNLAEVYG 43 (153)
T ss_dssp EEESCCHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTC
T ss_pred EEEeCcHHHHHHHHHHHhCCC-EEEEEeCChhhhcchhhccc
Confidence 467999999887776655333 44567899998877776554
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=88.18 E-value=0.13 Score=43.48 Aligned_cols=32 Identities=25% Similarity=0.259 Sum_probs=26.5
Q ss_pred EEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 197 IVAVFGL-GTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 197 ~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
+|||+|+ |-+|...+..+...|...|++++..
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~ 34 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKL 34 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 5899988 9999999988888898667777653
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=88.10 E-value=0.5 Score=34.69 Aligned_cols=39 Identities=21% Similarity=0.225 Sum_probs=33.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
|...|.|+|+|.+|...+.++...+...++.+|.++++.
T Consensus 2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~ 40 (150)
T d1t2da1 2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMP 40 (150)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcc
Confidence 456799999999999888888888888999999888653
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=88.08 E-value=1.8 Score=35.61 Aligned_cols=99 Identities=19% Similarity=0.215 Sum_probs=62.7
Q ss_pred hhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEc--CChhhHHHHHhcCCCEEeCCCC----------------
Q 022865 188 NTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGID--IDPKKFDRAKNFGVTEFVNPKD---------------- 248 (291)
Q Consensus 188 ~~~~~~~g~~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~--~~~~~~~~~~~~ga~~~i~~~~---------------- 248 (291)
+...++++...+|. .+|..|.+.+..++.+|+.-++.+. .++.|++..+.+|++.++....
T Consensus 57 ~~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~ 136 (320)
T d1z7wa1 57 KKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPAKGMKGAIAKAEEILAK 136 (320)
T ss_dssp HTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhhccCcceEEeeccccccccchhHHHHHHh
Confidence 44555566555554 6699999999999999985444443 3346788888999864432111
Q ss_pred -----------CC-------chHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhh
Q 022865 249 -----------HD-------KPIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 249 -----------~~-------~~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~ 286 (291)
++ .....++.+...+.+|.++-++|+-.++.-..+.++
T Consensus 137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k 192 (320)
T d1z7wa1 137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLK 192 (320)
T ss_dssp CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhh
Confidence 01 022334444545578999999998776665555554
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=87.89 E-value=0.31 Score=39.31 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=59.1
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCE-EeCCCCCCchHHHHHHhhcCCCccEEEE
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTE-FVNPKDHDKPIQQVLVDLTDGGVDYSFE 270 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d~v~d 270 (291)
..++.+||=+|+|. |..+..+++...-.+++++|.+++-++.+++-.... .+..+...- .+.++.||+|+.
T Consensus 82 ~~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~~l-------~~~~~sfD~v~~ 153 (268)
T d1p91a_ 82 DDKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL-------PFSDTSMDAIIR 153 (268)
T ss_dssp CTTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSC-------SBCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehhhc-------cCCCCCEEEEee
Confidence 45677888888866 667777777763338999999999988887643322 222211100 122347999996
Q ss_pred cCCChHHHHHHHHHhhccC
Q 022865 271 CIGNVSVMRAALECCHKVS 289 (291)
Q Consensus 271 ~~g~~~~~~~~~~~l~~~g 289 (291)
.-. +..++...+.|+++|
T Consensus 154 ~~~-~~~~~e~~rvLkpgG 171 (268)
T d1p91a_ 154 IYA-PCKAEELARVVKPGG 171 (268)
T ss_dssp ESC-CCCHHHHHHHEEEEE
T ss_pred cCC-HHHHHHHHHHhCCCc
Confidence 543 455888999999984
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=87.83 E-value=0.48 Score=38.53 Aligned_cols=88 Identities=17% Similarity=0.173 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCC-------------C---EEeCCCCCCchHHHH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGV-------------T---EFVNPKDHDKPIQQV 256 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga-------------~---~~i~~~~~~~~~~~~ 256 (291)
.+.++|||+|+|. |..+-.+++. ...+|++++-+++-.++++++-. + .++. .+..+.
T Consensus 71 ~~p~~vLiiG~G~-G~~~~~~l~~-~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~-----~Da~~~ 143 (276)
T d1mjfa_ 71 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTI-----GDGFEF 143 (276)
T ss_dssp SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEE-----SCHHHH
T ss_pred CCCceEEEecCCc-hHHHHHHHHh-CCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEE-----ChHHHH
Confidence 4557999998754 4444555554 44589999999999998886421 0 1111 123344
Q ss_pred HHhhcCCCccEEE-EcCC---------ChHHHHHHHHHhhccC
Q 022865 257 LVDLTDGGVDYSF-ECIG---------NVSVMRAALECCHKVS 289 (291)
Q Consensus 257 v~~~~~gg~d~v~-d~~g---------~~~~~~~~~~~l~~~g 289 (291)
+++ .+++|+|| |... +.+.++.+.+.|+++|
T Consensus 144 l~~--~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~G 184 (276)
T d1mjfa_ 144 IKN--NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPG 184 (276)
T ss_dssp HHH--CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEE
T ss_pred Hhc--cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCc
Confidence 543 35899665 4433 1355777888888873
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=87.78 E-value=0.19 Score=41.32 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=28.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
-++|+|+|..|+.++..+...|. +|.+++.++.
T Consensus 3 dv~IIGaG~sGl~~A~~L~~~g~-~V~iiEk~~~ 35 (298)
T d1i8ta1 3 DYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNH 35 (298)
T ss_dssp EEEEECCSHHHHHHHHHHGGGTC-CEEEECSSSS
T ss_pred cEEEECCcHHHHHHHHHHHhCCC-cEEEEECCCC
Confidence 47899999999999999888898 8999987764
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=87.76 E-value=0.4 Score=36.57 Aligned_cols=39 Identities=36% Similarity=0.436 Sum_probs=32.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN 237 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~ 237 (291)
+|.|+|.|-+|+..+.++ +.|+ +|+++|.++++.+.+++
T Consensus 2 kI~ViGlG~vGl~~a~~~-a~g~-~V~g~Din~~~v~~l~~ 40 (196)
T d1dlja2 2 KIAVAGSGYVGLSLGVLL-SLQN-EVTIVDILPSKVDKINN 40 (196)
T ss_dssp EEEEECCSHHHHHHHHHH-TTTS-EEEEECSCHHHHHHHHT
T ss_pred EEEEECCChhHHHHHHHH-HCCC-cEEEEECCHHHHHHHhh
Confidence 578899999999876655 4688 99999999999887753
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=87.66 E-value=0.19 Score=41.50 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=25.4
Q ss_pred EEEEcCChHHHHHHHHHH-----HcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAK-----AAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~-----~~g~~~v~~~~~~~ 229 (291)
|+|+|+|++|++++.++. ..|+ +|+++++.+
T Consensus 10 V~IvGaG~aGl~lA~~La~~~~~~~G~-~v~vlEr~~ 45 (360)
T d1pn0a1 10 VLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRS 45 (360)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHhcccccCCC-cEEEEcCCC
Confidence 889999999998777763 4688 899998765
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=87.59 E-value=0.26 Score=37.47 Aligned_cols=31 Identities=16% Similarity=0.123 Sum_probs=26.8
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
..|+|+|+|+.|+.++..+..+|. ++++++.
T Consensus 6 ~~VvIIGgGpaGl~aA~~~ar~g~-~v~vie~ 36 (192)
T d1vdca1 6 TRLCIVGSGPAAHTAAIYAARAEL-KPLLFEG 36 (192)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CCEEECC
T ss_pred ceEEEECCCHHHHHHHHHHHHcCC-cEEEEEe
Confidence 579999999999999988889999 7777763
|
| >d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=87.38 E-value=0.27 Score=37.81 Aligned_cols=30 Identities=27% Similarity=0.282 Sum_probs=26.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
|+|+|+|+.|+.|+..|..+|. +|..++..
T Consensus 6 viIIGgGpAGl~aA~~aar~G~-~V~viE~~ 35 (229)
T d3lada1 6 VIVIGAGPGGYVAAIKSAQLGL-KTALIEKY 35 (229)
T ss_dssp EEEECCSHHHHHHHHHHHHHTC-CEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 7888999999999999999999 88888754
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=87.31 E-value=0.85 Score=35.86 Aligned_cols=84 Identities=6% Similarity=-0.026 Sum_probs=51.9
Q ss_pred CEEEEEcCChH----HHHHHHHHHHc--CCCeEEE-EcCChhhHH-HHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccE
Q 022865 196 SIVAVFGLGTV----GLAVAEGAKAA--GASRVIG-IDIDPKKFD-RAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDY 267 (291)
Q Consensus 196 ~~vlI~G~g~v----G~~ai~~a~~~--g~~~v~~-~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~ 267 (291)
=+|.|+|.|.. +...+...+.+ ++ ++++ .+.+.++.+ ++++++......++ ++.+.+. ...+|+
T Consensus 17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~-~ivav~d~~~~~~~~~~~~~~~~~~~~~~----~~~~l~~---~~~iD~ 88 (237)
T d2nvwa1 17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQF-QIVALYNPTLKSSLQTIEQLQLKHATGFD----SLESFAQ---YKDIDM 88 (237)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTE-EEEEEECSCHHHHHHHHHHTTCTTCEEES----CHHHHHH---CTTCSE
T ss_pred eEEEEEecCccccHHHHHHHHHHHhcCCCe-EEEEEEcCCHHHHHHHHHhcccccceeec----chhhccc---ccccce
Confidence 37899998653 33334444444 45 6665 566666654 45677764332232 2333332 237999
Q ss_pred EEEcCCChHHHHHHHHHhhc
Q 022865 268 SFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 268 v~d~~g~~~~~~~~~~~l~~ 287 (291)
|+.|+.+....+.++.+|..
T Consensus 89 V~i~tp~~~h~~~~~~al~a 108 (237)
T d2nvwa1 89 IVVSVKVPEHYEVVKNILEH 108 (237)
T ss_dssp EEECSCHHHHHHHHHHHHHH
T ss_pred eeccCCCcchhhHHHHHHHh
Confidence 99999988888888888764
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.30 E-value=0.26 Score=36.72 Aligned_cols=27 Identities=33% Similarity=0.506 Sum_probs=24.3
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGAS 220 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~ 220 (291)
++++|+|+|+|.+|+-++..++.+|.+
T Consensus 2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~ 28 (185)
T d1q1ra1 2 ANDNVVIVGTGLAGVEVAFGLRASGWE 28 (185)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHcCCc
Confidence 468999999999999999999999984
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=87.20 E-value=3.3 Score=29.83 Aligned_cols=92 Identities=17% Similarity=0.152 Sum_probs=49.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCC-----------EEeCCCCCCchHHHHHHhhcCC-
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVT-----------EFVNPKDHDKPIQQVLVDLTDG- 263 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~-----------~~i~~~~~~~~~~~~v~~~~~g- 263 (291)
++|-++|.|.+|...+.-+...|. .++.-+..++..++.++.+.. .++...............+...
T Consensus 1 ekIg~IGlG~MG~~ma~~L~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~ 79 (156)
T d2cvza2 1 EKVAFIGLGAMGYPMAGHLARRFP-TLVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYL 79 (156)
T ss_dssp CCEEEECCSTTHHHHHHHHHTTSC-EEEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTC
T ss_pred CeEEEEeHHHHHHHHHHHHHhCCC-EEEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhccccccc
Confidence 468899999999876666555666 665555555555555554431 1111111112222222333333
Q ss_pred -CccEEEEc-CCChHHHHHHHHHhhcc
Q 022865 264 -GVDYSFEC-IGNVSVMRAALECCHKV 288 (291)
Q Consensus 264 -g~d~v~d~-~g~~~~~~~~~~~l~~~ 288 (291)
.-.+++|+ +..+.......+.++..
T Consensus 80 ~~~~~iid~sT~~p~~~~~~~~~~~~~ 106 (156)
T d2cvza2 80 REGTYWVDATSGEPEASRRLAERLREK 106 (156)
T ss_dssp CTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred cccccccccccCCHHHHHHHHHHHHHc
Confidence 34566665 55666666666666654
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.13 E-value=0.37 Score=39.55 Aligned_cols=32 Identities=28% Similarity=0.417 Sum_probs=29.5
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
++.+|+|.|-|.+|..+++.+..+|+ +|++++
T Consensus 35 ~gktvaIqGfGnVG~~~A~~L~e~Ga-kvv~vs 66 (293)
T d1hwxa1 35 GDKTFAVQGFGNVGLHSMRYLHRFGA-KCVAVG 66 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEE
Confidence 57899999999999999999999999 888875
|
| >d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=87.02 E-value=0.32 Score=37.47 Aligned_cols=30 Identities=37% Similarity=0.421 Sum_probs=26.8
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
++|+|+|+.|+.++..+..+|. +|.+++..
T Consensus 6 viIIG~GpaG~~aA~~aar~G~-kV~vIEk~ 35 (221)
T d3grsa1 6 YLVIGGGSGGLASARRAAELGA-RAAVVESH 35 (221)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-EEEEEecc
Confidence 6788999999999999999999 88888754
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=86.91 E-value=0.33 Score=37.77 Aligned_cols=34 Identities=21% Similarity=0.153 Sum_probs=27.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHc--CCCeEEEEcCChh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAA--GASRVIGIDIDPK 230 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~--g~~~v~~~~~~~~ 230 (291)
.+|+|+|+|+.|+.|+..++.. |+ .|++++..+.
T Consensus 2 ~kv~iIGaGpaGl~aA~~L~~~~~~~-~V~v~e~~~~ 37 (230)
T d1cjca2 2 PQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLV 37 (230)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSS
T ss_pred CeEEEECccHHHHHHHHHHHhcCCCC-eEEEEeCCCC
Confidence 3799999999999998866554 66 8998887753
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=86.80 E-value=0.31 Score=40.41 Aligned_cols=35 Identities=26% Similarity=0.321 Sum_probs=27.2
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPK 230 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~ 230 (291)
++|+|+|+|..|++++..++..|. .+|++++++++
T Consensus 5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 589999999999988766555442 38999988764
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=86.78 E-value=0.32 Score=38.72 Aligned_cols=32 Identities=19% Similarity=0.149 Sum_probs=27.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
-|+|+|+|.+|++++-.+...|. +|++++..+
T Consensus 6 DvvIIGaGi~Gls~A~~La~~G~-~V~vlE~~~ 37 (276)
T d1ryia1 6 EAVVIGGGIIGSAIAYYLAKENK-NTALFESGT 37 (276)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 48999999999998877778898 899998764
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=86.60 E-value=2.6 Score=32.21 Aligned_cols=90 Identities=17% Similarity=0.108 Sum_probs=57.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHH----HhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEc
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRA----KNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFEC 271 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~ 271 (291)
..||=+|+|. |..++.+|+...-..+++++.+...++.+ ++.+.+.+..... +.......+..+.+|.|+-.
T Consensus 31 PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~---Da~~l~~~~~~~~~d~v~i~ 106 (204)
T d2fcaa1 31 PIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI---DADTLTDVFEPGEVKRVYLN 106 (204)
T ss_dssp CEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC---CGGGHHHHCCTTSCCEEEEE
T ss_pred ceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc---chhhhhcccCchhhhccccc
Confidence 3555578876 88888999987545999999999876655 3456543322222 11122222334478877655
Q ss_pred CCC--------------hHHHHHHHHHhhccC
Q 022865 272 IGN--------------VSVMRAALECCHKVS 289 (291)
Q Consensus 272 ~g~--------------~~~~~~~~~~l~~~g 289 (291)
-.. +..+..+.+.|+++|
T Consensus 107 fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG 138 (204)
T d2fcaa1 107 FSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGG 138 (204)
T ss_dssp SCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSC
T ss_pred cccccchhhhcchhhhHHHHHHHHHHhCCCCc
Confidence 443 367888999999993
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=86.33 E-value=2.6 Score=34.57 Aligned_cols=94 Identities=16% Similarity=0.183 Sum_probs=58.6
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhcCCCEEeCCCCC---------------------
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDH--------------------- 249 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~--~~~~~~~~~~~ga~~~i~~~~~--------------------- 249 (291)
.+..+|+...+|..|.+.+..++.+|...++.+.. +.+|.+..+.+|++.++.....
T Consensus 73 ~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (331)
T d1tdja1 73 QKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPP 152 (331)
T ss_dssp SCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHHHHSCEEECCCSSHHHHHHHHHHHHHHHCCEECCS
T ss_pred CCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHHHhcCCEEEEcCcccccchhhhhhhhhcCCCccccc
Confidence 34455666677999999999999999855555433 3367888889999544322211
Q ss_pred --Cc-------hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHhhc
Q 022865 250 --DK-------PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECCHK 287 (291)
Q Consensus 250 --~~-------~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l~~ 287 (291)
++ .+..++.+. .+.+|.||-++|+-.++.-....++.
T Consensus 153 ~~~~~~~~g~~t~~~Ei~~q-~~~~D~vv~~~G~GG~~aG~~~~~~~ 198 (331)
T d1tdja1 153 FDHPMVIAGQGTLALELLQQ-DAHLDRVFVPVGGGGLAAGVAVLIKQ 198 (331)
T ss_dssp SCCHHHHHHHHHHHHHHHHH-CTTCCEEEEECSSSHHHHHHHHHHHH
T ss_pred cCChHHhhhhhhHHHHHHHh-cCCCCEEEEeCChhHHHHHHHHHHHH
Confidence 00 122333333 23689999998886666555555543
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=86.32 E-value=0.31 Score=40.36 Aligned_cols=39 Identities=36% Similarity=0.476 Sum_probs=30.4
Q ss_pred cCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 190 AKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 190 ~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
..+.++++||-+|+|. |++++.+|+ +|+++|++++.++.
T Consensus 29 ~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~ 67 (316)
T d1oria_ 29 RHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSI 67 (316)
T ss_dssp HHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTT
T ss_pred cccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHH
Confidence 4456889999999875 777776665 68779999998864
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=86.32 E-value=0.24 Score=38.59 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=27.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCC------eEEEEcCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGAS------RVIGIDIDP 229 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~------~v~~~~~~~ 229 (291)
.+|+|+|+|+.|++|+..+..+|.. .|++++..+
T Consensus 3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~ 42 (239)
T d1lqta2 3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLP 42 (239)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence 4799999999999999887777631 688887765
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=86.14 E-value=1.4 Score=30.82 Aligned_cols=85 Identities=11% Similarity=0.128 Sum_probs=49.4
Q ss_pred CCEEEEEcCChH--H------HHHHHH---HHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcC-
Q 022865 195 GSIVAVFGLGTV--G------LAVAEG---AKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTD- 262 (291)
Q Consensus 195 g~~vlI~G~g~v--G------~~ai~~---a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~- 262 (291)
.+.|||+|+|+. | ++++|. +|..|+ +++.+.++++....-..+ +|.++-. +-..+.+.+...
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~-~~IliN~NPeTVstd~d~-aD~lYfe----plt~e~v~~Ii~~ 77 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGY-ETIMVNCNPETVSTDYDT-SDRLYFE----PVTLEDVLEIVRI 77 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTC-EEEEECCCTTSSTTSTTS-SSEEECC----CCSHHHHHHHHHH
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCC-eEEEEecChhhhhcChhh-cCceEEc----cCCHHHHHHHHHH
Confidence 468999998742 2 444454 445699 899998888754322222 3333321 111222333222
Q ss_pred CCccEEEEcCCChHHHHHHHHHh
Q 022865 263 GGVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 263 gg~d~v~d~~g~~~~~~~~~~~l 285 (291)
.+.|.|+-..|+-..++.+.++-
T Consensus 78 E~p~~ii~~~GGQtalnla~~L~ 100 (121)
T d1a9xa4 78 EKPKGVIVQYGGQTPLKLARALE 100 (121)
T ss_dssp HCCSEEECSSSTHHHHTTHHHHH
T ss_pred hCCCEEEeehhhhhHHHHHHHHH
Confidence 26899999999877666666543
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=85.72 E-value=0.4 Score=38.85 Aligned_cols=33 Identities=24% Similarity=0.452 Sum_probs=26.8
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.|+|+|+|.+|++++.-+...|.++|+++++++
T Consensus 3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 589999999999877666677875799998763
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=85.65 E-value=0.39 Score=39.09 Aligned_cols=31 Identities=42% Similarity=0.644 Sum_probs=27.3
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|..|+.++..|...|+ +|++++..+
T Consensus 19 VlVIG~G~aGl~aA~~la~~G~-~V~lvEK~~ 49 (308)
T d1y0pa2 19 VVVVGSGGAGFSAAISATDSGA-KVILIEKEP 49 (308)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEecCC
Confidence 8899999999999988889999 899987654
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=85.48 E-value=0.93 Score=32.31 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHH----HHcCCCeEEEEcCCh
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGA----KAAGASRVIGIDIDP 229 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a----~~~g~~~v~~~~~~~ 229 (291)
+++++++|+|+|.+|.-.+..+ +.+|. +|+.+...+
T Consensus 35 ~~~k~i~IvGgG~~G~E~A~~l~~~~~~~g~-~Vt~i~~~~ 74 (137)
T d1m6ia2 35 REVKSITIIGGGFLGSELACALGRKARALGT-EVIQLFPEK 74 (137)
T ss_dssp HHCSEEEEECCSHHHHHHHHHHHHHHHHHTC-EEEEECSSS
T ss_pred hcCCEEEEECCCHHHHHHHHHHHHHHHhcCC-EEEEecccc
Confidence 4568999999999996544333 45788 888887655
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=85.29 E-value=0.62 Score=35.66 Aligned_cols=87 Identities=17% Similarity=0.203 Sum_probs=55.9
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC-EEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~-~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
+.+..+||=+|+|. |..+..+++ .|. +|+++|.+++-++.+++ .+.. ..+..+. .++ .+.++.+|
T Consensus 35 l~~~~~ILDiGcG~-G~~~~~la~-~~~-~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~--~~l-----~~~~~~fD 104 (226)
T d1ve3a1 35 MKKRGKVLDLACGV-GGFSFLLED-YGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDA--RKL-----SFEDKTFD 104 (226)
T ss_dssp CCSCCEEEEETCTT-SHHHHHHHH-TTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT--TSC-----CSCTTCEE
T ss_pred cCCCCEEEEECCCc-chhhhhHhh-hhc-ccccccccccchhhhhhhhcccccccccccccc--ccc-----cccCcCce
Confidence 46788999999877 778888886 477 89999999988877754 2322 1222211 110 12234799
Q ss_pred EEEEcCC-----C---hHHHHHHHHHhhcc
Q 022865 267 YSFECIG-----N---VSVMRAALECCHKV 288 (291)
Q Consensus 267 ~v~d~~g-----~---~~~~~~~~~~l~~~ 288 (291)
+|+-.-. . ...++.+.+.|+++
T Consensus 105 ~I~~~~~l~~~~~~d~~~~l~~i~~~Lkpg 134 (226)
T d1ve3a1 105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPS 134 (226)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEE
T ss_pred EEEEecchhhCChhHHHHHHHHHHHHcCcC
Confidence 8886433 1 12466777788888
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.23 E-value=0.85 Score=34.75 Aligned_cols=69 Identities=20% Similarity=0.348 Sum_probs=41.7
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCC-eEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCccEEEEcCC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGAS-RVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVDYSFECIG 273 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~-~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d~v~d~~g 273 (291)
++|||+|+ |-+|...+..+...|.. +|++..+++.. . .... .... .++.+.... .....|.|+.|+|
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----~--~~~~-~~~~--~d~~~~~~~-~~~~~d~vi~~~g 71 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----E--HPRL-DNPV--GPLAELLPQ-LDGSIDTAFCCLG 71 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----C--CTTE-ECCB--SCHHHHGGG-CCSCCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----h--cccc-cccc--cchhhhhhc-cccchheeeeeee
Confidence 68999998 99999999888888852 56655443211 0 0111 1111 223333332 3337899999988
Q ss_pred Ch
Q 022865 274 NV 275 (291)
Q Consensus 274 ~~ 275 (291)
..
T Consensus 72 ~~ 73 (212)
T d2a35a1 72 TT 73 (212)
T ss_dssp CC
T ss_pred ee
Confidence 63
|
| >d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thermotoga maritima [TaxId: 2336]
Probab=85.05 E-value=2.5 Score=34.06 Aligned_cols=88 Identities=13% Similarity=0.153 Sum_probs=55.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcC--ChhhHHHHHhcCCCEEeCCCCC-------------------------C
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDI--DPKKFDRAKNFGVTEFVNPKDH-------------------------D 250 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~--~~~~~~~~~~~ga~~~i~~~~~-------------------------~ 250 (291)
|+...+|..|.+++..++.+|..-++.+.. ++.|.+..+.+|++.++...+. +
T Consensus 58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (293)
T d1o58a_ 58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGELGMKGAVEKALEISRETGAHMLNQFEN 137 (293)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHHCCBCCCTTTC
T ss_pred eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccccCCcEEEEecCcchhhHHHHHHHHHHhccCCEEeeeccc
Confidence 333466999999999999999865555543 4568888889998643321110 0
Q ss_pred c--------hHHHHHHhhcCCCccEEEEcCCChHHHHHHHHHh
Q 022865 251 K--------PIQQVLVDLTDGGVDYSFECIGNVSVMRAALECC 285 (291)
Q Consensus 251 ~--------~~~~~v~~~~~gg~d~v~d~~g~~~~~~~~~~~l 285 (291)
. ....++.+..++.+|.||-++|+-.++.-....+
T Consensus 138 ~~~~~~~~~t~~~Ei~~q~~~~~d~vv~~vG~Gg~~~Gi~~~~ 180 (293)
T d1o58a_ 138 PYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVL 180 (293)
T ss_dssp HHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHH
T ss_pred cceeeeccccHHHhhhhhcCCCCCEEEEecCcchhHHHHHHHH
Confidence 0 1223344444556899998888766555544444
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=85.04 E-value=0.76 Score=31.82 Aligned_cols=36 Identities=19% Similarity=0.058 Sum_probs=28.4
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCC--eEEEEcCCh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGAS--RVIGIDIDP 229 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~--~v~~~~~~~ 229 (291)
.+++++|+|+|.+|.-.+..+..++.. .|+.+.+.+
T Consensus 19 ~p~~v~ivGgG~ig~E~A~~l~~l~~~~~~Vtli~~~~ 56 (117)
T d1aoga2 19 PPRRVLTVGGGFISVEFAGIFNAYKPKDGQVTLCYRGE 56 (117)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred cCCeEEEECCcHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence 457999999999999988887777642 688887655
|
| >d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.90 E-value=0.35 Score=37.65 Aligned_cols=30 Identities=30% Similarity=0.422 Sum_probs=26.6
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
|+|+|+|+.|+.|+..|..+|. +|..++..
T Consensus 6 viVIG~GpaGl~aA~~aa~~G~-kV~viE~~ 35 (235)
T d1h6va1 6 LIIIGGGSGGLAAAKEAAKFDK-KVMVLDFV 35 (235)
T ss_dssp EEEECCSHHHHHHHHHHGGGCC-CEEEECCC
T ss_pred EEEECCCHHHHHHHHHHHHCCC-eEEEEecc
Confidence 7889999999999999999999 88888743
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=84.87 E-value=1.1 Score=33.40 Aligned_cols=74 Identities=18% Similarity=0.275 Sum_probs=43.3
Q ss_pred CCCEEEEEcCChHHHHHH---HHHH--HcCCCeEEEEcCChhhHHHH--------HhcCCCEEeCCCCCCchHHHHHHhh
Q 022865 194 PGSIVAVFGLGTVGLAVA---EGAK--AAGASRVIGIDIDPKKFDRA--------KNFGVTEFVNPKDHDKPIQQVLVDL 260 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai---~~a~--~~g~~~v~~~~~~~~~~~~~--------~~~ga~~~i~~~~~~~~~~~~v~~~ 260 (291)
|+-.|.|+|+|.+|.... .+++ .+....++.+|.++++++.. ..++.+.-+.... +..+.+
T Consensus 1 p~mKI~iIGaGsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~t---d~~eaL--- 74 (171)
T d1obba1 1 PSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTM---NLDDVI--- 74 (171)
T ss_dssp CCCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEES---CHHHHH---
T ss_pred CCcEEEEECCCHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeC---Chhhcc---
Confidence 455789999999985432 2332 22234899999999887642 2233332222111 222222
Q ss_pred cCCCccEEEEcCCCh
Q 022865 261 TDGGVDYSFECIGNV 275 (291)
Q Consensus 261 ~~gg~d~v~d~~g~~ 275 (291)
.++|+|+.+++..
T Consensus 75 --~dad~Vv~~~~~g 87 (171)
T d1obba1 75 --IDADFVINTAMVG 87 (171)
T ss_dssp --TTCSEEEECCCTT
T ss_pred --cCCCeEeeecccc
Confidence 2699999998754
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=84.84 E-value=0.67 Score=38.39 Aligned_cols=89 Identities=16% Similarity=0.056 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE--EeCCCCCCchHHHHHHhhc--CCC
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE--FVNPKDHDKPIQQVLVDLT--DGG 264 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~--~i~~~~~~~~~~~~v~~~~--~gg 264 (291)
.+|++||=+++|. |..++++|+ |+.+|+++|.+++.++.+++ .|.+. ++.. +..+.+..+. ++.
T Consensus 144 ~~g~rVLDl~~gt-G~~s~~~a~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~-----d~~~~~~~~~~~~~~ 215 (318)
T d1wxxa2 144 FRGERALDVFSYA-GGFALHLAL--GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEA-----NAFDLLRRLEKEGER 215 (318)
T ss_dssp CCEEEEEEETCTT-THHHHHHHH--HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEES-----CHHHHHHHHHHTTCC
T ss_pred hCCCeeeccCCCC-cHHHHHHHh--cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeec-----cHHHHhhhhHhhhcC
Confidence 4688888876543 333445554 33489999999999888864 44432 2221 2233333322 238
Q ss_pred ccEEEEcCC-----C----------hHHHHHHHHHhhccC
Q 022865 265 VDYSFECIG-----N----------VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~g-----~----------~~~~~~~~~~l~~~g 289 (291)
||+|+--.+ . ...+..++++|++||
T Consensus 216 fD~Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG 255 (318)
T d1wxxa2 216 FDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGG 255 (318)
T ss_dssp EEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEE
T ss_pred CCEEEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 997774211 1 134567778888883
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=84.78 E-value=0.74 Score=31.79 Aligned_cols=34 Identities=18% Similarity=0.016 Sum_probs=27.0
Q ss_pred CCEEEEEcCChHHHHHHHHHHHc---CCCeEEEEcCCh
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAA---GASRVIGIDIDP 229 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~---g~~~v~~~~~~~ 229 (291)
+++++|+|+|.+|.-.++++..+ |. +|..+.+.+
T Consensus 18 p~~v~IiGgG~ig~E~A~~l~~~~~~g~-~Vtli~~~~ 54 (117)
T d1feca2 18 PKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGD 54 (117)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSS
T ss_pred CCeEEEECCChHHHHHHHHhHhhccccc-ccceecccc
Confidence 47899999999999888776654 66 788887765
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=84.43 E-value=0.9 Score=33.01 Aligned_cols=38 Identities=24% Similarity=0.300 Sum_probs=31.2
Q ss_pred CCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 022865 195 GSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKF 232 (291)
Q Consensus 195 g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~ 232 (291)
...|.|+|+|.+|...+..+...| +..++.+|.++++.
T Consensus 5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~ 43 (146)
T d1ez4a1 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRT 43 (146)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchh
Confidence 357999999999999888877777 45899999988764
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=84.43 E-value=0.61 Score=35.46 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=32.0
Q ss_pred CCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 194 PGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 194 ~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.+.+|.|+|.|.+|...+++++.+|. +|++.+....
T Consensus 43 ~~~~vgiiG~G~IG~~va~~l~~fg~-~v~~~d~~~~ 78 (188)
T d1sc6a1 43 RGKKLGIIGYGHIGTQLGILAESLGM-YVYFYDIENK 78 (188)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCC
T ss_pred cceEEEEeecccchhhhhhhcccccc-eEeecccccc
Confidence 47799999999999999999999999 8999877543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.43 E-value=1.7 Score=30.41 Aligned_cols=61 Identities=23% Similarity=0.238 Sum_probs=47.4
Q ss_pred hhhhcCCCCCCEEEEE-cCChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCC
Q 022865 186 VWNTAKVEPGSIVAVF-GLGTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNP 246 (291)
Q Consensus 186 ~~~~~~~~~g~~vlI~-G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~ 246 (291)
++....+..-+.+++. ..-..-+++.++++.++..++++...+++..+.++++|++.+++.
T Consensus 57 ~l~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~~~G~d~vi~p 118 (132)
T d1lssa_ 57 TLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFERLGVDVVVSP 118 (132)
T ss_dssp HHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHHHTTCSEEECH
T ss_pred hhhhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHHHCCCCEEECH
Confidence 4456677776766654 334455778889999999899998888888999999999988864
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=84.30 E-value=1.2 Score=36.71 Aligned_cols=31 Identities=29% Similarity=0.184 Sum_probs=27.1
Q ss_pred CEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 196 SIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 196 ~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
++|||+|+ |-+|...+..+...|. .|+++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~-~V~~ld~ 34 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGY-LPVVIDN 34 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTC-CEEEEEC
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcC-EEEEEEC
Confidence 68999988 9999999988888898 8888863
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=84.28 E-value=0.98 Score=32.82 Aligned_cols=37 Identities=41% Similarity=0.582 Sum_probs=30.3
Q ss_pred CEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKF 232 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~ 232 (291)
+.|.|+|+|.+|..++..+...| +..++.+|.++++.
T Consensus 2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~ 39 (146)
T d1hyha1 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKV 39 (146)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchh
Confidence 57889999999988888777766 45899999988863
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=84.27 E-value=0.49 Score=37.74 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=26.7
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|.+|+.++.-+...|. +|++++..+
T Consensus 6 vvIIGaGi~Gls~A~~La~~G~-~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFD 36 (281)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 7899999999998888778898 899997753
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=84.25 E-value=0.77 Score=37.09 Aligned_cols=90 Identities=13% Similarity=0.134 Sum_probs=58.7
Q ss_pred CCCCCCEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhHHHHHhc----CCCEEeCCCCCCchHHHHHHhh-cCCC
Q 022865 191 KVEPGSIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKFDRAKNF----GVTEFVNPKDHDKPIQQVLVDL-TDGG 264 (291)
Q Consensus 191 ~~~~g~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~~~~~~~----ga~~~i~~~~~~~~~~~~v~~~-~~gg 264 (291)
.+.++.+||=+|+|. |..+..+++..+. .+|+++|.+++-++.+++. +.+..+...+ +.++ ..+.
T Consensus 24 ~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d--------~~~~~~~~~ 94 (281)
T d2gh1a1 24 KITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGD--------ATEIELNDK 94 (281)
T ss_dssp CCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESC--------TTTCCCSSC
T ss_pred ccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccc--------cccccccCC
Confidence 466778898889875 8888888887642 3899999999988877643 3322121111 0111 1337
Q ss_pred ccEEEEcC-----CC-hHHHHHHHHHhhccC
Q 022865 265 VDYSFECI-----GN-VSVMRAALECCHKVS 289 (291)
Q Consensus 265 ~d~v~d~~-----g~-~~~~~~~~~~l~~~g 289 (291)
||+|+..- .+ ...++.+.+.|+++|
T Consensus 95 fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG 125 (281)
T d2gh1a1 95 YDIAICHAFLLHMTTPETMLQKMIHSVKKGG 125 (281)
T ss_dssp EEEEEEESCGGGCSSHHHHHHHHHHTEEEEE
T ss_pred ceEEEEehhhhcCCCHHHHHHHHHHHcCcCc
Confidence 99988642 22 355788888888883
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=84.14 E-value=1.3 Score=36.61 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=29.2
Q ss_pred CCEEEEEcC---ChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 195 GSIVAVFGL---GTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 195 g~~vlI~G~---g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
++..||.|+ .++|++.++.+...|+ +|+.+.+.+...
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA-~V~i~~~~~~~~ 41 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNV-KIIFGIWPPVYN 41 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTC-EEEEEECGGGHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCC-EEEEEeCchhhh
Confidence 467889994 3899999999989999 888876665543
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=84.11 E-value=2.8 Score=30.91 Aligned_cols=72 Identities=18% Similarity=0.158 Sum_probs=42.0
Q ss_pred CCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCC-EEeCCCCCCchHHHHHHhhcCC
Q 022865 191 KVEPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVT-EFVNPKDHDKPIQQVLVDLTDG 263 (291)
Q Consensus 191 ~~~~g~~vlI~G~--g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~-~~i~~~~~~~~~~~~v~~~~~g 263 (291)
.+.++.+||=+++ |.+|+ ..+ ..|+ +++.+|.+++..+.+++ ++.. .++..+. ..+... ....+.
T Consensus 38 ~~~~g~~vLDl~~G~G~~~i---~a~-~~ga-~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~--d~~~~~-~~~~~~ 109 (171)
T d1ws6a1 38 RYPRRGRFLDPFAGSGAVGL---EAA-SEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALPV--EVFLPE-AKAQGE 109 (171)
T ss_dssp HCTTCCEEEEETCSSCHHHH---HHH-HTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCH--HHHHHH-HHHTTC
T ss_pred cccCCCeEEEeccccchhhh---hhh-hccc-hhhhcccCHHHHhhhhHHHHhhccccceeeeeh--hccccc-ccccCC
Confidence 4567788876654 55443 433 4688 78899999998877743 4543 3333322 222111 223334
Q ss_pred CccEEEE
Q 022865 264 GVDYSFE 270 (291)
Q Consensus 264 g~d~v~d 270 (291)
.||+||-
T Consensus 110 ~fD~If~ 116 (171)
T d1ws6a1 110 RFTVAFM 116 (171)
T ss_dssp CEEEEEE
T ss_pred ccceeEE
Confidence 7998874
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=84.09 E-value=1.1 Score=32.34 Aligned_cols=37 Identities=30% Similarity=0.433 Sum_probs=30.7
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCC-CeEEEEcCChhhH
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGA-SRVIGIDIDPKKF 232 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~-~~v~~~~~~~~~~ 232 (291)
..|.|+|+|.+|..++..+...+. ..++.+|.++++.
T Consensus 2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~ 39 (143)
T d1llda1 2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERV 39 (143)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 468889999999999888887774 5799999988764
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=83.79 E-value=0.88 Score=32.86 Aligned_cols=36 Identities=22% Similarity=0.234 Sum_probs=29.9
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCChhhH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDPKKF 232 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~~~~ 232 (291)
.|.|+|+|.+|..++.++...+...++.+|..+++.
T Consensus 3 KI~IIGaG~VG~~~A~~l~~~~l~dl~l~D~~~~~~ 38 (142)
T d1uxja1 3 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEGVP 38 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSEEEEECSSSSHH
T ss_pred eEEEECCCHHHHHHHHHHHhCCcceEEEEeeccccc
Confidence 688899999999888777777777899999888754
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=83.70 E-value=0.51 Score=37.92 Aligned_cols=33 Identities=27% Similarity=0.436 Sum_probs=29.5
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEc
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGID 226 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~ 226 (291)
-++.+|+|.|-|.+|..+++++..+|+ +|+++.
T Consensus 34 l~g~~v~IQGfGnVG~~~a~~L~e~Ga-kvvavs 66 (255)
T d1bgva1 34 LVGKTVALAGFGNVAWGAAKKLAELGA-KAVTLS 66 (255)
T ss_dssp STTCEEEECCSSHHHHHHHHHHHHHTC-EEEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCC-eEEEEe
Confidence 367899999999999999999999999 888764
|
| >d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=83.40 E-value=0.5 Score=38.77 Aligned_cols=32 Identities=44% Similarity=0.599 Sum_probs=27.5
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
-|+|+|+|..|+.++.-|...|+ +|++++..+
T Consensus 21 DVvVIGaG~aGl~AA~~aa~~G~-~V~vlEK~~ 52 (317)
T d1qo8a2 21 QVLVVGAGSAGFNASLAAKKAGA-NVILVDKAP 52 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 38899999999999988888999 888887643
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=83.25 E-value=3.5 Score=30.49 Aligned_cols=89 Identities=19% Similarity=0.154 Sum_probs=48.2
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh--hhHHHHHhcCCC-----EEeCCCCC-----Cc--hH--HHHHHhh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP--KKFDRAKNFGVT-----EFVNPKDH-----DK--PI--QQVLVDL 260 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~--~~~~~~~~~ga~-----~~i~~~~~-----~~--~~--~~~v~~~ 260 (291)
+|.|.|-|.+|+++.+++...+. .|+++.... +.+..+-++-.. ..+...++ .. .+ .....++
T Consensus 2 kigINGfGRIGR~~~R~l~~~~i-~iv~INd~~~~~~~ayLl~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i 80 (168)
T d2g82a1 2 KVGINGFGRIGRQVFRILHSRGV-EVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI 80 (168)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSCHHHHHHHHHCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred EEEEECCcHHHHHHHHHHhcCCC-EEEEECCCcchhhhhheeecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence 57888999999999988887788 676653322 233333332110 00000000 00 00 0001222
Q ss_pred cCC--CccEEEEcCCChHHHHHHHHHhh
Q 022865 261 TDG--GVDYSFECIGNVSVMRAALECCH 286 (291)
Q Consensus 261 ~~g--g~d~v~d~~g~~~~~~~~~~~l~ 286 (291)
.+. ++|+|+||+|.-...+.+...+.
T Consensus 81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~ 108 (168)
T d2g82a1 81 PWAEAGVGVVIESTGVFTDADKAKAHLE 108 (168)
T ss_dssp CTGGGTEEEEEECSSSCCBHHHHTHHHH
T ss_pred cccccCCceeEeccccccchHHhhhhhc
Confidence 222 79999999997555566665554
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=83.02 E-value=1.7 Score=32.23 Aligned_cols=52 Identities=17% Similarity=0.128 Sum_probs=38.6
Q ss_pred CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHH-HHHhcCCCEEeCCC
Q 022865 193 EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFD-RAKNFGVTEFVNPK 247 (291)
Q Consensus 193 ~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~-~~~~~ga~~~i~~~ 247 (291)
-.|++|+|+|. ..+|.-...++...|+ +|+.+......++ ..++ +|.++...
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~ga-tVt~~h~~t~~l~~~~~~--ADivI~a~ 88 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGC-TTTVTHRFTKNLRHHVEN--ADLLIVAV 88 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTC-EEEEECSSCSCHHHHHHH--CSEEEECS
T ss_pred cccceEEEEeccccccHHHHHHHHHhhc-cccccccccchhHHHHhh--hhHhhhhc
Confidence 47899999997 7799999999999999 8888876665443 3333 66665543
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.81 E-value=0.49 Score=38.05 Aligned_cols=32 Identities=31% Similarity=0.332 Sum_probs=26.3
Q ss_pred EEEEEcCChHHHHHHH-HHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAE-GAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~-~a~~~g~~~v~~~~~~~ 229 (291)
-|+|+|+|+.|+.++. +|+.+|. +|++++..+
T Consensus 35 DViVIGaGpaGL~aA~~LA~~~G~-~V~vlE~~~ 67 (278)
T d1rp0a1 35 DVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSV 67 (278)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHccCC-eEEEEecCC
Confidence 4899999999998765 5566799 899998775
|
| >d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=82.70 E-value=0.64 Score=36.90 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=27.1
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCC
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDID 228 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~ 228 (291)
++|+|+|+.|+.++..|..+|. +|..++..
T Consensus 4 viVIG~G~aG~~aA~~aa~~G~-~V~liE~~ 33 (259)
T d1onfa1 4 LIVIGGGSGGMAAARRAARHNA-KVALVEKS 33 (259)
T ss_dssp EEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred EEEECCCHHHHHHHHHHHHCCC-eEEEEecC
Confidence 6888999999999999999999 89999864
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=82.45 E-value=1.5 Score=32.43 Aligned_cols=40 Identities=28% Similarity=0.434 Sum_probs=33.2
Q ss_pred CCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhH
Q 022865 193 EPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKF 232 (291)
Q Consensus 193 ~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~ 232 (291)
.+...|.|+|+|.+|..++..+...| +..++.+|.++++.
T Consensus 18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a 58 (160)
T d1i0za1 18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKL 58 (160)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchh
Confidence 34568999999999999999888887 45799999887664
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=82.11 E-value=1.2 Score=32.27 Aligned_cols=48 Identities=19% Similarity=0.066 Sum_probs=37.3
Q ss_pred hhhhhhhhhhcCCCCCCEEEEE--cCChHHHHHHHHHHHcCCCeEEEEcCChh
Q 022865 180 PTGLGAVWNTAKVEPGSIVAVF--GLGTVGLAVAEGAKAAGASRVIGIDIDPK 230 (291)
Q Consensus 180 ~ta~~~~~~~~~~~~g~~vlI~--G~g~vG~~ai~~a~~~g~~~v~~~~~~~~ 230 (291)
.|+...+ ..+..+++.++|+ |+|-+|+.+++++..+|. +|+.+...+.
T Consensus 26 ~t~~d~l--~~~~~~~~~vvi~d~ggg~ig~e~A~~la~~G~-~Vtlv~~~~~ 75 (156)
T d1djqa2 26 LTPEQVM--DGKKKIGKRVVILNADTYFMAPSLAEKLATAGH-EVTIVSGVHL 75 (156)
T ss_dssp ECHHHHH--HTCSCCCSEEEEEECCCSSHHHHHHHHHHHTTC-EEEEEESSCT
T ss_pred ECHHHHh--cCccccCCceEEEecCCChHHHHHHHHHHHcCC-eEEEEecCCc
Confidence 3555533 3556778888887 779999999999999999 8888877653
|
| >d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella putrefaciens [TaxId: 24]
Probab=81.95 E-value=0.57 Score=38.40 Aligned_cols=31 Identities=45% Similarity=0.724 Sum_probs=27.2
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|+|+|+|..|+.++..|...|+ +|++++..+
T Consensus 26 VvVIG~G~aGl~aA~~la~~G~-~V~llEk~~ 56 (322)
T d1d4ca2 26 VVIIGSGGAGLAAAVSARDAGA-KVILLEKEP 56 (322)
T ss_dssp EEEECSSHHHHHHHHHHHTTTC-CEEEECSSS
T ss_pred EEEECcCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 8999999999999888888899 899997654
|
| >d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Fumarate reductase species: Wolinella succinogenes [TaxId: 844]
Probab=81.46 E-value=0.59 Score=38.34 Aligned_cols=31 Identities=29% Similarity=0.412 Sum_probs=27.1
Q ss_pred EEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 198 VAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 198 vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
|||+|+|..|+.|+.-|...|+ +|++++..+
T Consensus 8 VvVIG~G~AGl~AAl~aa~~G~-~V~liEK~~ 38 (336)
T d2bs2a2 8 SLVIGGGLAGLRAAVATQQKGL-STIVLSLIP 38 (336)
T ss_dssp EEEECCSHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 8899999999999998889999 788887654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=81.32 E-value=1.7 Score=32.21 Aligned_cols=73 Identities=14% Similarity=0.058 Sum_probs=41.2
Q ss_pred CCEEEEEcCChHHHH--HHHHHHHc-C--CCeEEEEcCChhhHHHH--------HhcCCCEEeCCCCCCchHHHHHHhhc
Q 022865 195 GSIVAVFGLGTVGLA--VAEGAKAA-G--ASRVIGIDIDPKKFDRA--------KNFGVTEFVNPKDHDKPIQQVLVDLT 261 (291)
Q Consensus 195 g~~vlI~G~g~vG~~--ai~~a~~~-g--~~~v~~~~~~~~~~~~~--------~~~ga~~~i~~~~~~~~~~~~v~~~~ 261 (291)
.-.|.|+|+|.+|.. ...+++.. . ...++.+|.++++++.. ..++.+..+.... +..+.+
T Consensus 3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~---d~~eal---- 75 (167)
T d1u8xx1 3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT---DPEEAF---- 75 (167)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES---CHHHHH----
T ss_pred CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC---Chhhcc----
Confidence 346888999877633 33333322 2 24899999999987632 1233332222111 111122
Q ss_pred CCCccEEEEcCCCh
Q 022865 262 DGGVDYSFECIGNV 275 (291)
Q Consensus 262 ~gg~d~v~d~~g~~ 275 (291)
.++|+|+.++|..
T Consensus 76 -~~AD~Vvitag~~ 88 (167)
T d1u8xx1 76 -TDVDFVMAHIRVG 88 (167)
T ss_dssp -SSCSEEEECCCTT
T ss_pred -CCCCEEEECCCcC
Confidence 2699999999863
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.20 E-value=2 Score=38.06 Aligned_cols=34 Identities=15% Similarity=0.164 Sum_probs=29.5
Q ss_pred CEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 196 SIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 196 ~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
.+|+|+|+|++|.-++.-+-..|.++++.+|.+.
T Consensus 26 s~VlvvG~gglG~Ei~knLvl~GVg~itivD~d~ 59 (529)
T d1yova1 26 AHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 59 (529)
T ss_dssp CEEEECCCSHHHHHHHHHHHTTTCSEEEEECCSB
T ss_pred CCEEEECCCHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 5899999999999888888888999999987654
|
| >d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO species: Pig (Sus scrofa) [TaxId: 9823]
Probab=81.01 E-value=0.73 Score=39.10 Aligned_cols=33 Identities=27% Similarity=0.359 Sum_probs=25.1
Q ss_pred EEEEEcCChHHHHHHHHHHH------cCCCeEEEEcCChh
Q 022865 197 IVAVFGLGTVGLAVAEGAKA------AGASRVIGIDIDPK 230 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~------~g~~~v~~~~~~~~ 230 (291)
-|+|+|+|+.|++++..+.+ .|+ +|.+++..++
T Consensus 34 DViIVGgGPAGlsaA~~LA~l~~~~~~Gl-~VlllEK~~~ 72 (380)
T d2gmha1 34 DVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAAH 72 (380)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSSS
T ss_pred CEEEECCCHHHHHHHHHHHhhhhhhcCCC-EEEEEcCCCC
Confidence 38888999999886654443 688 8999987653
|
| >d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Putative methyltransferase SPy1538 species: Streptococcus pyogenes [TaxId: 1314]
Probab=80.91 E-value=2.2 Score=30.74 Aligned_cols=85 Identities=16% Similarity=0.139 Sum_probs=48.2
Q ss_pred CCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHh----cCCCE-EeCCCCCCchHHHHHHhhcCCCcc
Q 022865 194 PGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKN----FGVTE-FVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 194 ~g~~vlI~G~--g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~----~ga~~-~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
+|.+||=+++ |.+|+ ..+ .+|+++|+.++.+++..+.+++ ++... +..... +..+.+.. ..+.||
T Consensus 14 ~g~~vlDl~~GtG~~~i---ea~-~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~---D~~~~l~~-~~~~fD 85 (152)
T d2esra1 14 NGGRVLDLFAGSGGLAI---EAV-SRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM---EAERAIDC-LTGRFD 85 (152)
T ss_dssp CSCEEEEETCTTCHHHH---HHH-HTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS---CHHHHHHH-BCSCEE
T ss_pred CCCeEEEcCCccCHHHH---HHH-HhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcc---cccccccc-cccccc
Confidence 5777776754 55555 433 4688899999999987766643 45432 211221 23334433 345899
Q ss_pred EEEEcCC-ChHHHHHHHHHhh
Q 022865 267 YSFECIG-NVSVMRAALECCH 286 (291)
Q Consensus 267 ~v~d~~g-~~~~~~~~~~~l~ 286 (291)
+||---+ ........++.+.
T Consensus 86 iIf~DPPy~~~~~~~~l~~i~ 106 (152)
T d2esra1 86 LVFLDPPYAKETIVATIEALA 106 (152)
T ss_dssp EEEECCSSHHHHHHHHHHHHH
T ss_pred eeEechhhccchHHHHHHHHH
Confidence 8875322 2334455555543
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=80.88 E-value=1.4 Score=31.66 Aligned_cols=38 Identities=21% Similarity=0.226 Sum_probs=30.6
Q ss_pred EEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHH
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDR 234 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~ 234 (291)
.|.|+|+|.+|...+..+...+ +..++.+|.++++.+.
T Consensus 2 KI~IIGaG~VG~~la~~l~~~~l~~el~L~Di~~~~~~~ 40 (142)
T d1guza1 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQG 40 (142)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCceEEEeccccccchh
Confidence 4788899999999888887777 4589999988876543
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.87 E-value=3 Score=30.96 Aligned_cols=70 Identities=17% Similarity=0.114 Sum_probs=45.9
Q ss_pred hcccchhhhhhhhhhcCC-CCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCC
Q 022865 175 LGCGVPTGLGAVWNTAKV-EPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPK 247 (291)
Q Consensus 175 l~~~~~ta~~~~~~~~~~-~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~ 247 (291)
++|.....+. +.+..++ -.|++|+|+|. ..+|.-.+.++...|+ +|+.+......+.... ..+|.++...
T Consensus 19 ~PcTp~aii~-lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~ga-tVt~~~~~t~~l~~~~-~~aDivi~a~ 90 (170)
T d1a4ia1 19 IPCTPKGCLE-LIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNA-TVTTCHSKTAHLDEEV-NKGDILVVAT 90 (170)
T ss_dssp CCHHHHHHHH-HHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTC-EEEEECTTCSSHHHHH-TTCSEEEECC
T ss_pred CCChHHHHHH-HHHHhCcccccceEEEEecCCccchHHHHHHHhccC-ceEEEecccccHHHHH-hhccchhhcc
Confidence 3444343333 3334443 37899999998 7899999999999999 8998877665543222 2466666443
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| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=80.69 E-value=2.3 Score=34.94 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=54.8
Q ss_pred cCCCCCCEEEEEcC--ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhc----CCC---E-EeCCCCCCchHHHHHHh
Q 022865 190 AKVEPGSIVAVFGL--GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNF----GVT---E-FVNPKDHDKPIQQVLVD 259 (291)
Q Consensus 190 ~~~~~g~~vlI~G~--g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~----ga~---~-~i~~~~~~~~~~~~v~~ 259 (291)
..+.+|++||=+.+ |+.++. ++ ..|+..|+.+|.++..++.+++. +.+ . ++. .+..+.+..
T Consensus 140 ~~~~~g~~VLdlf~~~G~~sl~---aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~-----~d~~~~l~~ 210 (317)
T d2b78a2 140 NGSAAGKTVLNLFSYTAAFSVA---AA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVV-----MDVFDYFKY 210 (317)
T ss_dssp HTTTBTCEEEEETCTTTHHHHH---HH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEE-----SCHHHHHHH
T ss_pred HHhhCCCceeecCCCCcHHHHH---HH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEE-----ccHHHHHHH
Confidence 44668899988743 665543 22 46887899999999988888642 321 1 222 123344443
Q ss_pred hc--CCCccEEEEcCCC---------------hHHHHHHHHHhhccC
Q 022865 260 LT--DGGVDYSFECIGN---------------VSVMRAALECCHKVS 289 (291)
Q Consensus 260 ~~--~gg~d~v~d~~g~---------------~~~~~~~~~~l~~~g 289 (291)
.. +..||+||---+. ...+..++++|+++|
T Consensus 211 ~~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG 257 (317)
T d2b78a2 211 ARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENG 257 (317)
T ss_dssp HHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEE
T ss_pred HHhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 22 2379977642110 235777888888883
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| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.61 E-value=1.6 Score=35.75 Aligned_cols=33 Identities=21% Similarity=0.377 Sum_probs=29.1
Q ss_pred CCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcC
Q 022865 194 PGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDI 227 (291)
Q Consensus 194 ~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~ 227 (291)
..+++||+|+ |-+|...+..+...|. +|+++++
T Consensus 15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~-~V~~~d~ 48 (341)
T d1sb8a_ 15 QPKVWLITGVAGFIGSNLLETLLKLDQ-KVVGLDN 48 (341)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEEC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcC-EEEEEEC
Confidence 4478999988 9999999999999999 8999875
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| >d1mo9a1 c.3.1.5 (A:2-192,A:314-383) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=80.59 E-value=0.84 Score=36.18 Aligned_cols=32 Identities=25% Similarity=0.227 Sum_probs=27.4
Q ss_pred EEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 197 IVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 197 ~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
-++|+|+|+.|+.++..+..+|. +|++++..+
T Consensus 44 DvvVIGgG~aG~~aA~~~a~~G~-kv~vve~~~ 75 (261)
T d1mo9a1 44 DAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWP 75 (261)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTC-CEEEEESSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-eEEEEeccC
Confidence 38888999999999999999999 788877654
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| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=80.52 E-value=0.53 Score=36.65 Aligned_cols=94 Identities=15% Similarity=0.128 Sum_probs=54.0
Q ss_pred CCCCCEEEEEcCChHHHHHHHHHHHcC-CCeEEEEcCChhhHHHHH----hcCCCEEeCCCCCCchHHHHHHhhc----C
Q 022865 192 VEPGSIVAVFGLGTVGLAVAEGAKAAG-ASRVIGIDIDPKKFDRAK----NFGVTEFVNPKDHDKPIQQVLVDLT----D 262 (291)
Q Consensus 192 ~~~g~~vlI~G~g~vG~~ai~~a~~~g-~~~v~~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~v~~~~----~ 262 (291)
..+.++||-+|.+. |..++.+|+++. -.+|+.++.+++..+.++ +.|....+.... .+..+.+.++. .
T Consensus 54 ~~kpk~ILEiGt~~-G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~--Gd~~e~l~~l~~~~~~ 130 (214)
T d2cl5a1 54 EYSPSLVLELGAYC-GYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILN--GASQDLIPQLKKKYDV 130 (214)
T ss_dssp HHCCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEE--SCHHHHGGGHHHHSCC
T ss_pred hhCCCEEEEEccCc-hhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeee--ccccccccchhhcccc
Confidence 34557899998744 667788888763 239999999998877774 345433121111 12233333322 2
Q ss_pred CCccEEEEcCCChH-----HHHHHHHHhhcc
Q 022865 263 GGVDYSFECIGNVS-----VMRAALECCHKV 288 (291)
Q Consensus 263 gg~d~v~d~~g~~~-----~~~~~~~~l~~~ 288 (291)
+.+|+||--..... .+..+++.|++|
T Consensus 131 ~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpG 161 (214)
T d2cl5a1 131 DTLDMVFLDHWKDRYLPDTLLLEKCGLLRKG 161 (214)
T ss_dssp CCEEEEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred cccceeeecccccccccHHHHHHHhCccCCC
Confidence 37997775433221 133444557776
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| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=80.22 E-value=0.84 Score=37.77 Aligned_cols=40 Identities=33% Similarity=0.464 Sum_probs=29.4
Q ss_pred hhcCCCCCCEEEEEcCChHHHHHHHHHHHcCCCeEEEEcCCh
Q 022865 188 NTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRVIGIDIDP 229 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~g~vG~~ai~~a~~~g~~~v~~~~~~~ 229 (291)
......++++||-+|+|. |+++..+| .+|+++|++++.++
T Consensus 32 ~~~~~~~~~~VLDlGcGt-G~ls~~aa-~~Ga~~V~avd~s~ 71 (328)
T d1g6q1_ 32 QNKDLFKDKIVLDVGCGT-GILSMFAA-KHGAKHVIGVDMSS 71 (328)
T ss_dssp HHHHHHTTCEEEEETCTT-SHHHHHHH-HTCCSEEEEEESST
T ss_pred hccccCCcCEEEEeCCCC-CHHHHHHH-HhCCCEEEEEeCCH
Confidence 334456889999999874 66665544 46877999999886
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| >d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
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class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermus thermophilus [TaxId: 274]
Probab=80.10 E-value=4.1 Score=30.45 Aligned_cols=80 Identities=26% Similarity=0.356 Sum_probs=46.7
Q ss_pred hhcCCCCCCEEEEEcC-ChHHHHHHHHHHHcCCCeEEEEcCChhhHHHHHhcCCCEEeCCCCCCchHHHHHHhhcCCCcc
Q 022865 188 NTAKVEPGSIVAVFGL-GTVGLAVAEGAKAAGASRVIGIDIDPKKFDRAKNFGVTEFVNPKDHDKPIQQVLVDLTDGGVD 266 (291)
Q Consensus 188 ~~~~~~~g~~vlI~G~-g~vG~~ai~~a~~~g~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~v~~~~~gg~d 266 (291)
....+++|.+ +|-++ |.=|+ ...+++. +. +|+++|+.++.++.+++.-.+.+-..+..-.++.+.+..+..+.+|
T Consensus 12 ~~l~~~~g~~-~vD~T~G~GGh-s~~iL~~-~~-~viaiD~D~~ai~~a~~~~~~~~~~~~~~f~~~~~~l~~~~~~~vd 87 (182)
T d1wg8a2 12 DLLAVRPGGV-YVDATLGGAGH-ARGILER-GG-RVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAALGVERVD 87 (182)
T ss_dssp HHHTCCTTCE-EEETTCTTSHH-HHHHHHT-TC-EEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHHTTCSCEE
T ss_pred HhcCCCCCCE-EEEeCCCCcHH-HHHHhcc-cC-cEEEEhhhhhHHHHHhhccccceeEeehHHHHHHHHHHHcCCCccC
Confidence 3345677775 56554 55444 3444543 55 9999999999998888753322211222224565666555445798
Q ss_pred -EEEEc
Q 022865 267 -YSFEC 271 (291)
Q Consensus 267 -~v~d~ 271 (291)
+++|.
T Consensus 88 gIl~DL 93 (182)
T d1wg8a2 88 GILADL 93 (182)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 55554
|