Citrus Sinensis ID: 022871

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-
Protein Sequence
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Secondary Structure (PSIPRED)
cccccccccccccEEcccccccEEEEEEEEEccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEccccccccEEEEEEccccccccccccEEEEEEEEcHHHHHHHHHHHcccEEEEccccccccccEEEEEEcccccEEEEEEcccccccccccEEEEccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccEEEEEEcccccccccccccEEEEEEEccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEcccccHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccHHHHHccccccccEEEEEEEEEccHHHHHHHHHHHHccEEEEEccccccccEEEEEccccccccEEEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHccccEEEcccccccccEEEEEEEcccccEEEEEEcccccccccEEEEEEccHHHHHHHHHHHHccEEEEEcccccccEEEEEEEcccccccEEEEEEEcccccEccccccEEEEEEEcccHHHHHHHHHHHHHHcccEEEccccccccccEEEEEEEcccccEEEEEccHHHHHHcccc
Coil and Loop (DISEMBL)
MAEASPAAANAELLewpkkdkrrFLHAVYRVGDLDRTIKFYTECFGmkllrkrdvpeekysnaflgfgpeqSHFVVELTYNygvtsydigtgfghfaIATEDVYKLVENIRAkggnvtrepgplkggtthiafvkdpdgyIFELiqrgptpeplCQVMLRVGDLGRSIKFYEKALGMKLlrtvdkpeyKYTLAMLGYAEEDQTTVLELTYNygvteytkgnAYAQVAISTDDVYKSAEVVNLVTQELggkitrqpgsipglntkitsfvdpdgwktvLVDNEDFLKEIQSE
Flexible Loop (DISEMBL)
MAEASPAAANAellewpkkdkrrfLHAVyrvgdldrtiKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKggnvtrepgplkgGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKAlgmkllrtvdKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQelggkitrqpgsipglnTKITsfvdpdgwktVLVDNEDFLKEIQSE
Low Complexity Region (SEG)
MaeaspaaanaelleWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Disordered region (IsUnstruct)
*************LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL******
Disordered Region (DISOPRED)
******A*ANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL******
Disordered Region (DISEMBL)
*********NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Disordered Region (DISPRO)
**********AELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	291	2.2.26 [Sep-21-2011]
Q39366	282	Putative lactoylglutathio	N/A	no	0.965	0.996	0.812	1e-137
Q948T6	291	Lactoylglutathione lyase	yes	no	0.993	0.993	0.797	1e-135
Q8W593	350	Probable lactoylglutathio	no	no	0.975	0.811	0.722	1e-124
P46235	138	Probable lactoylglutathio	yes	no	0.415	0.876	0.616	2e-41
Q9KT93	138	Probable lactoylglutathio	no	no	0.422	0.891	0.590	5e-40
P0A1Q2	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.588	3e-38
P0A1Q3	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	3e-38
P0AC83	135	Lactoylglutathione lyase	yes	no	0.412	0.888	0.588	4e-38
P0AC81	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	4e-38
P0AC82	135	Lactoylglutathione lyase	N/A	no	0.412	0.888	0.588	4e-38

>sp|Q39366|LGUL_BRAOG Putative lactoylglutathione lyase OS=Brassica oleracea var. gemmifera PE=2 SV=1

 Score =  486 bits (1251), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 229/282 (81%), Positives = 258/282 (91%), Gaps = 1/282 (0%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A NA+L+EWPKKDKRRFLH VYRVGDLDRTI+FYTECFGMK+LRKRDVPEEKYSNAFLGF
Sbjct: 2   AENADLVEWPKKDKRRFLHVVYRVGDLDRTIQFYTECFGMKVLRKRDVPEEKYSNAFLGF 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
           GPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTREPGP+KGG
Sbjct: 62  GPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVEAVRAKGGNVTREPGPVKGG 121

Query: 128 TTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE 187
            + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL R++KF EKALGM+LLR +++PE
Sbjct: 122 GSVIAFVKDPDGYTFELIQRGPTPEPLCQVMLRVGDLDRAVKFMEKALGMRLLRRIERPE 181

Query: 188 YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL 247
           Y  T+ M+GYAEE ++ VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKSAEVV +V QEL
Sbjct: 182 YN-TIGMMGYAEEYESIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSAEVVKIVNQEL 240

Query: 248 GGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
           GGKITR+ G +PGL TKI SF+DPDGWK VLVDNEDFLKE++
Sbjct: 241 GGKITREAGPLPGLGTKIVSFLDPDGWKQVLVDNEDFLKELE 282

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
Brassica oleracea var. gemmifera (taxid: 178616)
EC: 4EC: .EC: 4EC: .EC: 1EC: .EC: 5

>sp|Q948T6|LGUL_ORYSJ Lactoylglutathione lyase OS=Oryza sativa subsp. japonica GN=GLX-I PE=1 SV=2

 Score =  481 bits (1239), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 232/291 (79%), Positives = 256/291 (87%), Gaps = 2/291 (0%)

Query: 1   MAEASPAAANAEL-LEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 59
           MA  S A  + E+ LEWPKKDK+R LHAVYRVGDLDRTIK YTECFGMKLLRKRDVPEEK
Sbjct: 1   MASGSEAEKSPEVVLEWPKKDKKRLLHAVYRVGDLDRTIKCYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGG-NVT 118
           Y+NAFLGFGPE ++F +ELTYNYGV  YDIG GFGHFAIATEDVYKL E I++     +T
Sbjct: 61  YTNAFLGFGPEDTNFALELTYNYGVDKYDIGAGFGHFAIATEDVYKLAEKIKSSCCCKIT 120

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KGG+T IAF +DPDGY+FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGSTVIAFAQDPDGYMFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR  D P+YKYT+AMLGYA+ED+TTV+ELTYNYGVTEYTKGNAYAQVAI T+DVYKSAE
Sbjct: 181 LLRKKDVPDYKYTIAMLGYADEDKTTVIELTYNYGVTEYTKGNAYAQVAIGTEDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
            V LVT+ELGGKI RQPG +PGLNTKI SF+DPDGWK VLVDN DFLKE+Q
Sbjct: 241 AVELVTKELGGKILRQPGPLPGLNTKIASFLDPDGWKVVLVDNADFLKELQ 291

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q8W593|LGUC_ARATH Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=2 SV=1

 Score =  446 bits (1147), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 208/288 (72%), Positives = 242/288 (84%), Gaps = 4/288 (1%)

Query: 2   AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS 61
            +A+ A    +LL W K DKRR LH VYRVGD+DRTIKFYTEC GMKLLRKRD+PEEKY+
Sbjct: 67  GKAAQATTQDDLLTWVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYT 126

Query: 62  NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
           NAFLG+GPE SHFV+ELTYNYGV  YDIG GFGHF IA +DV K VE ++AKGG V+REP
Sbjct: 127 NAFLGYGPEDSHFVIELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREP 186

Query: 122 GPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLR 181
           GP+KGG T IAF++DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLR
Sbjct: 187 GPVKGGKTVIAFIEDPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLR 246

Query: 182 TVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN 241
           T D PEYKYT+AM+GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDDVYK+AE + 
Sbjct: 247 TRDNPEYKYTIAMMGYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIK 306

Query: 242 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
           L     GGKITR+PG +PG++TKIT+ +DPDGWK+V VDN DFLKE++
Sbjct: 307 L----FGGKITREPGPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P46235|LGUL_VIBPA Probable lactoylglutathione lyase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=gloA PE=3 SV=2

 Score =  169 bits (429), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 77/125 (61%), Positives = 95/125 (76%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDLD++IKFYTE  GM+LLR  +  E +Y+ AF+G+G E    V+ELTYN+
Sbjct: 5   RILHTMLRVGDLDKSIKFYTEVMGMQLLRTNENKEYEYTLAFVGYGDESQGAVIELTYNW 64

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           G T YD+GT FGH AI  +D+Y   + I+A GGNVTRE GP+KGGTTHIAFVKDPDGY+ 
Sbjct: 65  GKTEYDLGTAFGHIAIGVDDIYATCDAIKAAGGNVTREAGPVKGGTTHIAFVKDPDGYMI 124

Query: 143 ELIQR 147
           ELIQ 
Sbjct: 125 ELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio parahaemolyticus (taxid: 670)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|Q9KT93|LGUL_VIBCH Probable lactoylglutathione lyase OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=gloA PE=3 SV=2

 Score =  164 bits (416), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 93/127 (73%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTY
Sbjct: 3   NHRILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTY 62

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
           N+GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY
Sbjct: 63  NWGVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGY 122

Query: 141 IFELIQR 147
           + ELIQ 
Sbjct: 123 MIELIQN 129

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q2|LGUL_SALTY Lactoylglutathione lyase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=gloA PE=3 SV=1

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GP+KGG+T IAFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) (taxid: 99287)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0A1Q3|LGUL_SALTI Lactoylglutathione lyase OS=Salmonella typhi GN=gloA PE=3 SV=1

 Score =  159 bits (401), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 91/124 (73%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIAFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV SYD+G  +GH A++ ++  +  E IR  GGNVTRE GP+KGG+T IAFV+DPDGY  
Sbjct: 62  GVESYDMGNAYGHIALSVDNAAEACERIRQNGGNVTREAGPVKGGSTIIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Salmonella typhi (taxid: 90370)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC83|LGUL_SHIFL Lactoylglutathione lyase OS=Shigella flexneri GN=gloA PE=3 SV=1

 Score =  158 bits (400), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Shigella flexneri (taxid: 623)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC81|LGUL_ECOLI Lactoylglutathione lyase OS=Escherichia coli (strain K12) GN=gloA PE=1 SV=1

 Score =  158 bits (400), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli (strain K12) (taxid: 83333)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

>sp|P0AC82|LGUL_ECO57 Lactoylglutathione lyase OS=Escherichia coli O157:H7 GN=gloA PE=3 SV=1

 Score =  158 bits (400), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.

Escherichia coli O157:H7 (taxid: 83334)

EC: 4

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
2213425	291	hypothetical protein [Citrus x paradisi]	1.0	1.0	1.0	1e-169
359483362	292	PREDICTED: lactoylglutathione lyase [Vit	1.0	0.996	0.855	1e-148
211906514	289	lactoylglutathione lyase [Gossypium hirs	0.993	1.0	0.861	1e-148
356531939	296	PREDICTED: putative lactoylglutathione l	0.986	0.969	0.865	1e-147
356555674	287	PREDICTED: putative lactoylglutathione l	0.986	1.0	0.871	1e-147
224078584	294	predicted protein [Populus trichocarpa]	1.0	0.989	0.866	1e-147
449433964	292	PREDICTED: putative lactoylglutathione l	1.0	0.996	0.849	1e-145
255554865	280	lactoylglutathione lyase, putative [Rici	0.938	0.975	0.901	1e-143
388520197	284	unknown [Lotus japonicus]	0.962	0.985	0.857	1e-142
312281931	289	unnamed protein product [Thellungiella h	0.993	1.0	0.823	1e-141

>gi|2213425|emb|CAB09799.1| hypothetical protein [Citrus x paradisi]

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 291/291 (100%), Positives = 291/291 (100%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY
Sbjct: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE
Sbjct: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL
Sbjct: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291
           NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE
Sbjct: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291

Source: Citrus x paradisi

Species: Citrus x paradisi

Genus: Citrus

Family: Rutaceae

Order: Sapindales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483362|ref|XP_002273346.2| PREDICTED: lactoylglutathione lyase [Vitis vinifera] gi|302144130|emb|CBI23235.3| unnamed protein product [Vitis vinifera]

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 249/291 (85%), Positives = 273/291 (93%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+P   + ELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEAAPVVPSDELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPE+++FVVELTYNYGV  YDIGTGFGHFAIAT+DVYK+VE+IRAKGG +TRE
Sbjct: 61  TNAFLGFGPEETNFVVELTYNYGVDKYDIGTGFGHFAIATQDVYKMVEDIRAKGGIITRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFYEKALGMK++
Sbjct: 121 PGPVKGGKSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYEKALGMKMV 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV
Sbjct: 181 KKTDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291
           NLVT+ELGGKITRQPG IPGLNTKITSF+DPDGWKTVLVDNEDFLKE+  E
Sbjct: 241 NLVTKELGGKITRQPGPIPGLNTKITSFLDPDGWKTVLVDNEDFLKELHKE 291

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|211906514|gb|ACJ11750.1| lactoylglutathione lyase [Gossypium hirsutum]

 Score =  528 bits (1361), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 249/289 (86%), Positives = 272/289 (94%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAE S A  + ELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEGSAAVPSTELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPE+SHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYK+VE+IRAKGGN+TRE
Sbjct: 61  SNAFLGFGPEESHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKMVEDIRAKGGNITRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG++ IAFVKDPDGYIFELIQR  TPEPLCQVMLRVGDL RS+KFYEKALGMKL+
Sbjct: 121 PGPVKGGSSVIAFVKDPDGYIFELIQRASTPEPLCQVMLRVGDLDRSVKFYEKALGMKLV 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           + VD+PEYKY++AM+GYAEE +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS EVV
Sbjct: 181 KKVDRPEYKYSIAMMGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
             V QELGGK+TR+PG IPG+NTKITSF+DPDGWKTVLVDNEDFLKE++
Sbjct: 241 EHVIQELGGKVTRKPGPIPGINTKITSFLDPDGWKTVLVDNEDFLKELK 289

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356531939|ref|XP_003534533.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 250/289 (86%), Positives = 272/289 (94%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 10  MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 67

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYKLVE+IRAKGGN+TRE
Sbjct: 68  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNITRE 127

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEK LG++++
Sbjct: 128 PGPVKGGKSVIAFVKDPDGYAFELIQRSSTPEPLCQVMLRVGDLERSIKFYEKTLGLRVV 187

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 188 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 247

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
           N+VTQELGGKITRQPG +PGLNTKITSF+DPDGWKTVLVDN+DFLKE++
Sbjct: 248 NIVTQELGGKITRQPGPVPGLNTKITSFLDPDGWKTVLVDNQDFLKELE 296

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555674|ref|XP_003546155.1| PREDICTED: putative lactoylglutathione lyase-like [Glycine max]

 Score =  526 bits (1356), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 252/289 (87%), Positives = 273/289 (94%), Gaps = 2/289 (0%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEA+   +NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKY
Sbjct: 1   MAEAT--QSNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKY 58

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYKLVE+IRAKGGNVTRE
Sbjct: 59  ANAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKLVEDIRAKGGNVTRE 118

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQR  TPEPLCQVMLRVGDL RSIKFYEKALG++++
Sbjct: 119 PGPVKGGKSVIAFVKDPDGYAFELIQRPSTPEPLCQVMLRVGDLERSIKFYEKALGLRVV 178

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           +  D+PEYKYT+AMLGYAEE +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEVV
Sbjct: 179 KKTDRPEYKYTIAMLGYAEEHETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEVV 238

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
           N+VTQELGGKITRQPG IPGLNTKIT+F+DPDGWKTVLVDN+DFLKE++
Sbjct: 239 NIVTQELGGKITRQPGPIPGLNTKITAFLDPDGWKTVLVDNQDFLKELE 287

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224078584|ref|XP_002305564.1| predicted protein [Populus trichocarpa] gi|222848528|gb|EEE86075.1| predicted protein [Populus trichocarpa]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 254/293 (86%), Positives = 272/293 (92%), Gaps = 2/293 (0%)

Query: 1   MAEASPAAA--NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE 58
           MAE +  A   NAELLEWPKKDKRR LHAVYRVGDLDRTIKFYTE FGMKLLR RD+PEE
Sbjct: 1   MAEEAAKAVTPNAELLEWPKKDKRRLLHAVYRVGDLDRTIKFYTEGFGMKLLRHRDIPEE 60

Query: 59  KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
           KYSNAFLGFGPE+S+FVVELTYNYGVTSYDIG GFGHFAIATEDVYKLVE +RA GGN+T
Sbjct: 61  KYSNAFLGFGPEESNFVVELTYNYGVTSYDIGEGFGHFAIATEDVYKLVEKLRALGGNIT 120

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK 178
           REPGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQ+MLRVGDL RSIKFYEKALGMK
Sbjct: 121 REPGPVKGGASVIAFVKDPDGYAFELIQRGPTPEPLCQLMLRVGDLDRSIKFYEKALGMK 180

Query: 179 LLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 238
           LLR +D+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE
Sbjct: 181 LLRKIDRPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE 240

Query: 239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291
           VVNLVTQELGGKITRQPG IPG+NTKITSF+DPDGWK+VLVDNEDFLKE+  E
Sbjct: 241 VVNLVTQELGGKITRQPGPIPGINTKITSFLDPDGWKSVLVDNEDFLKELHKE 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449433964|ref|XP_004134766.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus] gi|449479479|ref|XP_004155610.1| PREDICTED: putative lactoylglutathione lyase-like [Cucumis sativus]

 Score =  518 bits (1335), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 248/292 (84%), Positives = 272/292 (93%), Gaps = 1/292 (0%)

Query: 1   MAEASPA-AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 59
           MAEA+ + A NAELLEWPKKDKRRFLH VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK
Sbjct: 1   MAEAAASLAPNAELLEWPKKDKRRFLHVVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK 60

Query: 60  YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR 119
           YSNAFLGFGPE S+FVVELTYNYGV+SYDIG+GFGHFAIAT+DVYKLVE+IRAKGG +TR
Sbjct: 61  YSNAFLGFGPEDSNFVVELTYNYGVSSYDIGSGFGHFAIATQDVYKLVEDIRAKGGIITR 120

Query: 120 EPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           EPGP+KGG++ IAF KDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSIKFY+KALGM+L
Sbjct: 121 EPGPVKGGSSVIAFAKDPDGYIFELIQRGPTPEPLCQVMLRVGDLERSIKFYDKALGMRL 180

Query: 180 LRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
           L+ VD+PEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAEV
Sbjct: 181 LKKVDRPEYKYTLAMMGYADEPETTVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAEV 240

Query: 240 VNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE 291
           VN V QELGGKITRQPG +PG+ TKI SF+DPDGWKTVLVDN DF KE+ ++
Sbjct: 241 VNQVNQELGGKITRQPGPLPGIGTKIVSFLDPDGWKTVLVDNADFQKELDNQ 292

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554865|ref|XP_002518470.1| lactoylglutathione lyase, putative [Ricinus communis] gi|223542315|gb|EEF43857.1| lactoylglutathione lyase, putative [Ricinus communis]

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 246/273 (90%), Positives = 260/273 (95%)

Query: 4   ASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNA 63
           A   A NA++LEWPKKDKRR LHAVYRVGDLDRTIKFYTECFGMKLLRKRD+PEEKYSNA
Sbjct: 3   AEATAPNADVLEWPKKDKRRLLHAVYRVGDLDRTIKFYTECFGMKLLRKRDIPEEKYSNA 62

Query: 64  FLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP 123
           FLGFGPE+++FVVELTYNYGVTSYDIGTGFGHFAIAT+DVYKLVE + AKGG VTREPGP
Sbjct: 63  FLGFGPEETNFVVELTYNYGVTSYDIGTGFGHFAIATQDVYKLVEEVLAKGGAVTREPGP 122

Query: 124 LKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV 183
           +KGGTT IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDL RSI+FYEKALGMKLLR V
Sbjct: 123 VKGGTTVIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLDRSIRFYEKALGMKLLRKV 182

Query: 184 DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 243
           DKPEYKYTLAM+GYA+E +TTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV
Sbjct: 183 DKPEYKYTLAMMGYADEYETTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLV 242

Query: 244 TQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
           TQELGGKITRQPG IPGLNTKITSF+DPDGWKT
Sbjct: 243 TQELGGKITRQPGPIPGLNTKITSFLDPDGWKT 275

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388520197|gb|AFK48160.1| unknown [Lotus japonicus]

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 240/280 (85%), Positives = 262/280 (93%)

Query: 10  NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP 69
           NAELL+W KKDKRRFLHAVYRVGDLDRTIKFYTECFGM+LLRKRD+PEEKY+NAFLGFG 
Sbjct: 5   NAELLDWSKKDKRRFLHAVYRVGDLDRTIKFYTECFGMQLLRKRDIPEEKYANAFLGFGS 64

Query: 70  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT 129
           EQSHFVVELTYNYGVTSYDIGTGFGHFAIAT DVYK VE++RAKGGNVTREPGP+KGG+T
Sbjct: 65  EQSHFVVELTYNYGVTSYDIGTGFGHFAIATPDVYKFVEDVRAKGGNVTREPGPVKGGST 124

Query: 130 HIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
            IAFVKDPDGY+FE+IQR  TPEPLCQVMLRVGDL RSIKFYEKALG+K+++  D+PE K
Sbjct: 125 VIAFVKDPDGYLFEIIQRASTPEPLCQVMLRVGDLERSIKFYEKALGLKVVKKTDRPEQK 184

Query: 190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
           YT+AMLGYAEE +T VLELTYNYGVTEYTKGNAYAQVAI TDDVYKSAE+VNL TQE GG
Sbjct: 185 YTIAMLGYAEEHETIVLELTYNYGVTEYTKGNAYAQVAIGTDDVYKSAELVNLATQEFGG 244

Query: 250 KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
           KITRQPG IPGLNTKI SF+DPDGWKTVLVDN+DFLKE++
Sbjct: 245 KITRQPGPIPGLNTKIASFLDPDGWKTVLVDNQDFLKELE 284

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|312281931|dbj|BAJ33831.1| unnamed protein product [Thellungiella halophila]

 Score =  507 bits (1305), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 238/289 (82%), Positives = 264/289 (91%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
           MAEAS  A NAELL+WPKKD RRFLH VYRVGDLDRTI+FYTECFGMKLLRKRDVPEEKY
Sbjct: 1   MAEASAVAPNAELLDWPKKDNRRFLHVVYRVGDLDRTIEFYTECFGMKLLRKRDVPEEKY 60

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           SNAFLGFGPE S+FVVELTYNYGV+SYDIGTGFGHFAI+T+DV K+VE +RAKGGNVTRE
Sbjct: 61  SNAFLGFGPETSNFVVELTYNYGVSSYDIGTGFGHFAISTQDVSKMVETVRAKGGNVTRE 120

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLR GDL R+IKFYEKALGM+LL
Sbjct: 121 PGPVKGGNSVIAFVKDPDGYAFELIQRGPTPEPLCQVMLRTGDLDRAIKFYEKALGMRLL 180

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R +++PEYKYT+ M+GYAEE +T VLELTYNYGVTEYTKGNAYAQ+AI TDDVYKS EVV
Sbjct: 181 RRIERPEYKYTIGMMGYAEEYETIVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKSGEVV 240

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
            +V QELGGKITR+ G +PGL TKI SF+DPDGWKTVLVDN+DFLKE++
Sbjct: 241 KIVNQELGGKITREAGPLPGLGTKIVSFLDPDGWKTVLVDNKDFLKELE 289

Source: Thellungiella halophila

Species: Eutrema halophilum

Genus: Eutrema

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	291
TAIR|locus:2019574	350	AT1G67280 [Arabidopsis thalian	0.927	0.771	0.744	5.8e-114
UNIPROTKB|Q9KT93	138	gloA "Probable lactoylglutathi	0.426	0.898	0.604	2.1e-38
TIGR_CMR|VC_1010	138	VC_1010 "lactoylglutathione ly	0.426	0.898	0.604	2.1e-38
UNIPROTKB|P0AC81	135	gloA "GloA" [Escherichia coli	0.426	0.918	0.588	1.3e-36
TIGR_CMR|SO_2044	136	SO_2044 "lactoylglutathione ly	0.426	0.911	0.584	1.5e-35
DICTYBASE|DDB_G0291265	136	gloA "glyoxylase I" [Dictyoste	0.426	0.911	0.548	3.2e-33
ASPGD|ASPL0000011175	318	AN4174 [Emericella nidulans (t	0.721	0.660	0.297	1.9e-26
POMBASE|SPBC12C2.12c	302	glo1 "glyoxalase I" [Schizosac	0.529	0.509	0.338	1.3e-24
RGD|1307010	298	Glod4 "glyoxalase domain conta	0.838	0.818	0.299	7.8e-23
UNIPROTKB|Q9HC38	313	GLOD4 "Glyoxalase domain-conta	0.711	0.661	0.296	1.4e-22

TAIR|locus:2019574 AT1G67280 [Arabidopsis thaliana (taxid:3702)]

 Score = 1124 (400.7 bits), Expect = 5.8e-114, P = 5.8e-114
 Identities = 204/274 (74%), Positives = 235/274 (85%)

Query:    16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV 75
             W K DKRR LH VYRVGD+DRTIKFYTEC GMKLLRKRD+PEEKY+NAFLG+GPE SHFV
Sbjct:    81 WVKNDKRRMLHVVYRVGDMDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFV 140

Query:    76 VELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVK 135
             +ELTYNYGV  YDIG GFGHF IA +DV K VE ++AKGG V+REPGP+KGG T IAF++
Sbjct:   141 IELTYNYGVDKYDIGAGFGHFGIAVDDVAKTVELVKAKGGKVSREPGPVKGGKTVIAFIE 200

Query:   136 DPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML 195
             DPDGY FEL++RGPTPEPLCQVMLRVGDL R+IKFYEKA GM+LLRT D PEYKYT+AM+
Sbjct:   201 DPDGYKFELLERGPTPEPLCQVMLRVGDLDRAIKFYEKAFGMELLRTRDNPEYKYTIAMM 260

Query:   196 GYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP 255
             GY  ED+  VLELTYNYGVTEY KGNAYAQ+AI TDDVYK+AE + L     GGKITR+P
Sbjct:   261 GYGPEDKFPVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKL----FGGKITREP 316

Query:   256 GSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
             G +PG++TKIT+ +DPDGWK+V VDN DFLKE++
Sbjct:   317 GPLPGISTKITACLDPDGWKSVFVDNIDFLKELE 350

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0005975 "carbohydrate metabolic process" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009570 "chloroplast stroma" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009409 "response to cold" evidence=IEP

GO:0010319 "stromule" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

UNIPROTKB|Q9KT93 gloA "Probable lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 75/124 (60%), Positives = 93/124 (75%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

TIGR_CMR|VC_1010 VC_1010 "lactoylglutathione lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 75/124 (60%), Positives = 93/124 (75%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDLD++I+FYT+  GM LLRK +  E KY+ AFLG+G E    V+ELTYN+
Sbjct:     5 RILHTMLRVGDLDKSIEFYTQVMGMSLLRKNENTEYKYTLAFLGYGDESQGAVIELTYNW 64

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y+ G  +GH AI  +D+Y   + I+A GG VTREPGP+KGGTTHIAFVKDPDGY+ 
Sbjct:    65 GVADYEKGNAYGHIAIGVDDIYATCDTIKAAGGIVTREPGPVKGGTTHIAFVKDPDGYMI 124

Query:   143 ELIQ 146
             ELIQ
Sbjct:   125 ELIQ 128

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0006749 "glutathione metabolic process" evidence=ISS

UNIPROTKB|P0AC81 gloA "GloA" [Escherichia coli K-12 (taxid:83333)]

 Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
 Identities = 73/124 (58%), Positives = 92/124 (74%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct:     2 RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct:    62 GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query:   143 ELIQ 146
             ELI+
Sbjct:   122 ELIE 125

GO:0016151 "nickel cation binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

TIGR_CMR|SO_2044 SO_2044 "lactoylglutathione lyase" [Shewanella oneidensis MR-1 (taxid:211586)]

 Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
 Identities = 73/125 (58%), Positives = 90/125 (72%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYN 81
             + LH + RVG+L+R+I FYT+  GMKLLR  + PE KYS AF+G+G E +   V+ELTYN
Sbjct:     3 QLLHTMIRVGNLERSIAFYTQVLGMKLLRTSENPEYKYSLAFVGYGEESTGQAVIELTYN 62

Query:    82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
             +G   YD+GTGFGH AI  +D+Y   E I A GG VTR PGP+ GGTT IAFV+DPDGY 
Sbjct:    63 WGTEKYDLGTGFGHIAIGDDDIYARCEAIAAAGGKVTRAPGPVAGGTTEIAFVEDPDGYK 122

Query:   142 FELIQ 146
              E IQ
Sbjct:   123 IEFIQ 127

GO:0004462 "lactoylglutathione lyase activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

DICTYBASE|DDB_G0291265 gloA "glyoxylase I" [Dictyostelium discoideum (taxid:44689)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 68/124 (54%), Positives = 89/124 (71%)

Query:    23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
             R LH + RVG+L+++++FY +  GMKLLRK +  E KY+ AF+G+  E  + V+ELTYN+
Sbjct:     3 RILHTMLRVGNLEKSLQFYIDVLGMKLLRKSENVEYKYTLAFVGYTNEDENAVIELTYNW 62

Query:    83 GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             GV  Y++GT FGH AI  +DVY+ VE IR  GG V RE  P+ GGTT IAFV+DPD Y  
Sbjct:    63 GVEKYELGTAFGHIAIGVDDVYETVERIRKSGGKVAREAAPVLGGTTVIAFVEDPDNYKI 122

Query:   143 ELIQ 146
             ELIQ
Sbjct:   123 ELIQ 126

GO:0046872 "metal ion binding" evidence=IEA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;ISS

GO:0005575 "cellular_component" evidence=ND

GO:0006749 "glutathione metabolic process" evidence=ISS

GO:0016829 "lyase activity" evidence=IEA

ASPGD|ASPL0000011175 AN4174 [Emericella nidulans (taxid:162425)]

 Score = 218 (81.8 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 72/242 (29%), Positives = 113/242 (46%)

Query:    70 EQSH-FVVELTYNYGVTSYDIGT--GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG 126
             E +H +  E   NY +T+ +     G+GH AI+ +++    + +   G    ++    +G
Sbjct:    72 ELTHNYGTENDPNYSITNGNTEPHRGYGHIAISVDNIEAACQRLEDAGYAFQKKL--TEG 129

Query:   127 GTTHIAFVKDPDGYIFELIQR-----GPTPEP----LCQVMLRVGDLGRSIKFYEKALGM 177
                HIAFVKDPDGY  E+I+R       + +P    L   MLRV D   S+K+Y++ LGM
Sbjct:   130 RMRHIAFVKDPDGYWVEIIKRRDEAMSTSTDPATYRLNHTMLRVKDAEASLKYYQEVLGM 189

Query:   178 KLLRTVDKPEYKYTLAMLGY-AEEDQTT------------VLELTYNYGVTEYTKGNAYA 224
              L+RT++  E  + L  LGY A   Q T            +LELT+NYG TE  +G  Y 
Sbjct:   190 TLVRTIENKEAAFNLYFLGYPASNPQATEGANNPVAEWEGLLELTWNYG-TEKQEGKVYH 248

Query:   225 QVAISTDD---VYKSAEVVNLVTQELGG-KITRQPGSIPGLNTKITSFVDPDGWKTVLVD 280
                        +  S + +N   +     K+  +     G    +   +DPDG+   ++ 
Sbjct:   249 NGNDEPQGFGHICVSVDDLNAACERFESLKVNWKKRLTDGRMKNVAFLLDPDGYWIEVIQ 308

Query:   281 NE 282
             NE
Sbjct:   309 NE 310

GO:0009438 "methylglyoxal metabolic process" evidence=RCA

GO:0004462 "lactoylglutathione lyase activity" evidence=IEA;RCA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006749 "glutathione metabolic process" evidence=IEA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IEA

POMBASE|SPBC12C2.12c glo1 "glyoxalase I" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 192 (72.6 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
 Identities = 62/183 (33%), Positives = 87/183 (47%)

Query:    65 LGFGPEQS--HFVVELTYNYGVTS-----YDIGT-----GFGHFAIATEDVYKLVENIRA 112
             L  G E+S    ++ELTYN+G        Y  G      GFGH     +++      + +
Sbjct:    61 LNHGVERSKREGILELTYNFGTEKKEGPVYINGNTEPKRGFGHICFTVDNIESACAYLES 120

Query:   113 KGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQV--------MLRVGDL 164
             KG +  ++     G   HIAF  DPD Y  EL+ +  T +P   +        M+RV D 
Sbjct:   121 KGVSFKKKLSD--GKMKHIAFALDPDNYWIELVSQSET-KPKANISNFRFNHTMVRVKDP 177

Query:   165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE----DQTTVLELTYNYGVTEYTKG 220
               SI FYEK LGMK++   D P  K+T   L Y  +    D+  +LELT+N+G TE   G
Sbjct:   178 EPSIAFYEK-LGMKVIDKADHPNGKFTNYFLAYPSDLPRHDREGLLELTHNWG-TEKESG 235

Query:   221 NAY 223
               Y
Sbjct:   236 PVY 238

GO:0004462 "lactoylglutathione lyase activity" evidence=IGI;IDA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005829 "cytosol" evidence=IDA

GO:0006749 "glutathione metabolic process" evidence=IDA

GO:0008270 "zinc ion binding" evidence=IDA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=IMP

GO:0071470 "cellular response to osmotic stress" evidence=TAS

RGD|1307010 Glod4 "glyoxalase domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 83/277 (29%), Positives = 130/277 (46%)

Query:    22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
             RR LH V++VG+  +T+ F+ +  GM++LR  +  E            K+S   +GFGPE
Sbjct:     4 RRALHFVFKVGNRFQTVHFFRDVLGMQVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 63

Query:    71 QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
               HFV ELTYNYG+  Y +G  F    +A+      V N R       R   PL      
Sbjct:    64 DDHFVAELTYNYGIGDYKLGNDFMGLTLASSQA---VSNAR-------RLEWPLSKVAEG 113

Query:   131 IAFVKDPDGYIFELIQRGPTP-EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
             +   + P GY F L  R P+  +P+ +V L V DL +S+ ++   LGMK+    D+ E K
Sbjct:   114 VFETEAPGGYKFYLQDRSPSQSDPVLKVTLAVSDLQKSLNYWSNLLGMKIYEQ-DE-EKK 171

Query:   190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGG 249
             +  A+LGYA+ DQ   LEL    G  +++        +    ++    +++   +Q +  
Sbjct:   172 W--ALLGYAD-DQCK-LELQGIQGAVDHSAAFGRIAFSCPQKELPDLEDLMKRESQSILT 227

Query:   250 KITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNEDF 284
              +     PG       ++    DPDG +   V +E F
Sbjct:   228 PLVSLDTPGKA---TVQVVILADPDGHEICFVGDEAF 261

GO:0005739 "mitochondrion" evidence=IEA;ISO

UNIPROTKB|Q9HC38 GLOD4 "Glyoxalase domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 206 (77.6 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
 Identities = 68/229 (29%), Positives = 101/229 (44%)

Query:    59 KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
             K+S   +GFGPE  HFV ELTYNYGV  Y +G  F    +A+      V N R       
Sbjct:    67 KWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGNDFMGITLASSQA---VSNAR------- 116

Query:   119 REPGPLKGGTTHIAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGM 177
             +   PL      +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGM
Sbjct:   117 KLEWPLTEVAEGVFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGM 176

Query:   178 KLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA 237
             K+    +K E K   A+LGYA  D    LEL    G  ++         +    ++    
Sbjct:   177 KIY---EKDEEKQR-ALLGYA--DNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLE 230

Query:   238 EVVNLVTQELGGKITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNEDF 284
             +++    Q++   +     PG       ++    DPDG +   V +E F
Sbjct:   231 DLMKRENQKILTPLVSLDTPGKA---TVQVVILADPDGHEICFVGDEAF 276

GO:0005739 "mitochondrion" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8W593	LGUC_ARATH	4, ., 4, ., 1, ., 5	0.7222	0.9759	0.8114	no	no
Q39366	LGUL_BRAOG	4, ., 4, ., 1, ., 5	0.8120	0.9656	0.9964	N/A	no
Q948T6	LGUL_ORYSJ	4, ., 4, ., 1, ., 5	0.7972	0.9931	0.9931	yes	no
Q09751	LGUL_SCHPO	4, ., 4, ., 1, ., 5	0.3209	0.8350	0.8046	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.4.1	LOW CONFIDENCE prediction!
4th Layer	4.4.1.5	0.979

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	291
PLN02300	286	PLN02300, PLN02300, lactoylglutathione lyase	0.0
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-84
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	7e-57
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	3e-46
TIGR00068	150	TIGR00068, glyox_I, lactoylglutathione lyase	3e-44
PRK10291	129	PRK10291, PRK10291, glyoxalase I; Provisional	1e-35
cd07233	121	cd07233, Glyoxalase_I, Glyoxalase I catalyzes the	2e-35
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	1e-27
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	7e-27
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	7e-19
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	2e-18
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	4e-17
cd08358	127	cd08358, Glo_EDI_BRP_like_21, This conserved domai	2e-16
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	6e-16
PLN03042	185	PLN03042, PLN03042, Lactoylglutathione lyase; Prov	5e-15
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	1e-13
PLN02367	233	PLN02367, PLN02367, lactoylglutathione lyase	9e-13
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	2e-11
cd06587	110	cd06587, Glo_EDI_BRP_like, This domain superfamily	7e-10
cd07245	114	cd07245, Glo_EDI_BRP_like_9, This conserved domain	1e-09
cd08362	120	cd08362, BphC5-RrK37_N_like, N-terminal, non-catal	1e-08
cd08354	122	cd08354, Glo_EDI_BRP_like_13, This conserved domai	3e-08
pfam12681	109	pfam12681, Glyoxalase_2, Glyoxalase-like domain	5e-08
cd07249	128	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)	6e-08
TIGR03081	128	TIGR03081, metmalonyl_epim, methylmalonyl-CoA epim	1e-07
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	2e-06
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-06
cd07242	128	cd07242, Glo_EDI_BRP_like_6, This conserved domain	4e-06
COG0346	138	COG0346, GloA, Lactoylglutathione lyase and relate	8e-06
cd08348	134	cd08348, BphC2-C3-RGP6_C_like, The single-domain 2	2e-05
TIGR02295	294	TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-di	2e-05
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-05
cd07253	125	cd07253, Glo_EDI_BRP_like_2, This conserved domain	3e-05
cd07263	120	cd07263, Glo_EDI_BRP_like_16, This conserved domai	4e-05
cd08346	126	cd08346, PcpA_N_like, N-terminal domain of Sphingo	4e-05
pfam13669	110	pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resi	1e-04
COG3324	127	COG3324, COG3324, Predicted enzyme related to lact	2e-04
cd08343	131	cd08343, ED_TypeI_classII_C, C-terminal domain of	2e-04
cd08349	112	cd08349, BLMA_like, Bleomycin binding protein (BLM	2e-04
cd07251	120	cd07251, Glo_EDI_BRP_like_10, This conserved domai	2e-04
cd08345	113	cd08345, Fosfomycin_RP, Fosfomycin resistant prote	2e-04
cd07247	114	cd07247, SgaA_N_like, N-terminal domain of Strepto	3e-04
pfam13468	174	pfam13468, Glyoxalase_3, Glyoxalase-like domain	6e-04
cd07262	123	cd07262, Glo_EDI_BRP_like_19, This conserved domai	7e-04
cd07255	125	cd07255, Glo_EDI_BRP_like_12, This conserved domai	0.001
cd08352	125	cd08352, Glo_EDI_BRP_like_1, This conserved domain	0.001

>gnl|CDD|215169 PLN02300, PLN02300, lactoylglutathione lyase

 Score =  552 bits (1425), Expect = 0.0
 Identities = 228/289 (78%), Positives = 250/289 (86%), Gaps = 4/289 (1%)

Query: 1   MAEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY 60
            A AS AA   +LLEWPKKDKRR LH VYRVGDLDRTIKFYTEC GMKLLRKRD+PEEKY
Sbjct: 2   SAAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKY 61

Query: 61  SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE 120
           +NAFLG+GPE S+FVVELTYNYGV  YDIGTGFGHF IA EDV K VE ++AKGG VTRE
Sbjct: 62  TNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTRE 121

Query: 121 PGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           PGP+KGG + IAFVKDPDGY FELIQRGPTPEPLCQVMLRVGDL RSIKFYEKA GMKLL
Sbjct: 122 PGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRVGDLDRSIKFYEKAFGMKLL 181

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV 240
           R  D PEYKYT+AM+GY  ED+TTVLELTYNYGVTEYTKGNAYAQ+AI TDDVYK+AE +
Sbjct: 182 RKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI 241

Query: 241 NLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ 289
            LV    GGKITR+PG +PG+NTKIT+ +DPDGWKTV VDN DFLKE++
Sbjct: 242 KLV----GGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKELE 286

Length = 286

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  249 bits (637), Expect = 3e-84
 Identities = 91/149 (61%), Positives = 109/149 (73%)

Query: 8   AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF 67
           A + +L+  PK  KRR LH + RVGDLD+++ FYTE  GMKLLRKRD PE K+S AFLG+
Sbjct: 2   AESGDLVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGY 61

Query: 68  GPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
           G E S  V+ELT+N+G   YD+G GFGH AI  +DVYK  E +RA GGNV REPGP+KGG
Sbjct: 62  GDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDVYKACERVRALGGNVVREPGPVKGG 121

Query: 128 TTHIAFVKDPDGYIFELIQRGPTPEPLCQ 156
           TT IAFV+DPDGY  ELIQR  T + L  
Sbjct: 122 TTVIAFVEDPDGYKIELIQRKSTKDGLGN 150

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  178 bits (454), Expect = 7e-57
 Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 3/123 (2%)

Query: 24  FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG 83
           FLH + RV DL++++ FYT+  GMKLLR++D PE K++  FLG+  E S  V+ELTYN+G
Sbjct: 1   FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWG 60

Query: 84  VT-SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
               YD G GFGH A A +DVY   E +   G  VT+ PG   GG   IAF+KDPDGY  
Sbjct: 61  TEEPYDNGNGFGHLAFAVDDVYAACERLEEMGVEVTKPPGD--GGMKGIAFIKDPDGYWI 118

Query: 143 ELI 145
           ELI
Sbjct: 119 ELI 121

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  151 bits (383), Expect = 3e-46
 Identities = 70/117 (59%), Positives = 87/117 (74%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
           RVGDL R+I FYT   GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+GV  Y++
Sbjct: 3   RVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYEL 62

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ 146
           GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  ELI+
Sbjct: 63  GTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIE 119

Length = 129

>gnl|CDD|232807 TIGR00068, glyox_I, lactoylglutathione lyase

 Score =  147 bits (372), Expect = 3e-44
 Identities = 61/130 (46%), Positives = 81/130 (62%), Gaps = 4/130 (3%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           L   MLRVGDL +S+ FY + LGMKLLR  D PE K++LA LGY +E    V+ELT+N+G
Sbjct: 18  LLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWG 77

Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
             +Y  GN +  +AI  DDVYK+ E V    + LGG + R+PG + G  T I    DPDG
Sbjct: 78  TEKYDLGNGFGHIAIGVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDG 133

Query: 274 WKTVLVDNED 283
           +K  L+  + 
Sbjct: 134 YKIELIQRKS 143

Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits This model twice [Central intermediary metabolism, Amino sugars, Energy metabolism, Other]. Length = 150

>gnl|CDD|182358 PRK10291, PRK10291, glyoxalase I; Provisional

 Score =  124 bits (312), Expect = 1e-35
 Identities = 61/126 (48%), Positives = 83/126 (65%), Gaps = 4/126 (3%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
           MLRVGDL RSI FY   LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +Y
Sbjct: 1   MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKY 60

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTV 277
             G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K  
Sbjct: 61  ELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIE 116

Query: 278 LVDNED 283
           L++ +D
Sbjct: 117 LIEEKD 122

Length = 129

>gnl|CDD|176659 cd07233, Glyoxalase_I, Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

 Score =  123 bits (310), Expect = 2e-35
 Identities = 56/120 (46%), Positives = 73/120 (60%), Gaps = 9/120 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             MLRV DL +S+ FY   LGMKLLR  D PE K+TL  LGY +ED   VLELTYN+G  
Sbjct: 3   HTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTE 62

Query: 216 E-YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 273
           E Y  GN +  +A + DDVY + E +    +E+G ++T+ PG       K  +F+ DPDG
Sbjct: 63  EPYDNGNGFGHLAFAVDDVYAACERL----EEMGVEVTKPPGD---GGMKGIAFIKDPDG 115

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event. Length = 121

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score =  103 bits (258), Expect = 1e-27
 Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 8/125 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H   RVGDL++++ FYT+  G KL+ + D  E    +AF          V+EL  N 
Sbjct: 1   RIDHVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNE 56

Query: 83  GVTSYDIGT---GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
                  G         A + +DV    + ++A G  + REPG    G    ++ +DPDG
Sbjct: 57  TPPPAAAGFGGHHIAFIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGR-YSYFRDPDG 115

Query: 140 YIFEL 144
            + EL
Sbjct: 116 NLIEL 120

Length = 120

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score =  101 bits (253), Expect = 7e-27
 Identities = 52/137 (37%), Positives = 70/137 (51%), Gaps = 21/137 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPE 70
           RR LH V++VG+ ++TIKFY E  GMK+LR  +  E            K+S   +G+GPE
Sbjct: 1   RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPE 60

Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
             HFVVELTYNYG+  Y++G  F    I ++          AK  N      P+      
Sbjct: 61  DDHFVVELTYNYGIGDYELGNDFLGITIHSKQAVS-----NAKKHNW-----PVTEVEDG 110

Query: 131 IAFVKDPDGYIFELIQR 147
           +  VK P GY F LI +
Sbjct: 111 VYEVKAPGGYKFYLIDK 127

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 79.8 bits (197), Expect = 7e-19
 Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+  + FY +  G ++L +     E    AFL  G       +EL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLG----GTRLEL-FEGDEP 52

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
           +   G G  H A   +DV   VE ++A G  +   P     G   +A+ +DPDG + EL
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERLKAAGVEILGGPREEPWGGR-VAYFRDPDGNLIEL 110

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 80.2 bits (198), Expect = 2e-18
 Identities = 59/176 (33%), Positives = 86/176 (48%), Gaps = 35/176 (19%)

Query: 1   MAEASP--AAANAELLEWPKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVP 56
           MA AS   AA N  L   P +  + ++    ++R+ D   ++ FY+   GM LL++ D P
Sbjct: 1   MASASKESAANNPGLCGNPDEATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFP 60

Query: 57  EEKYSNAFLGF---------GPEQSHFV------VELTYNYGVTS------YDIG----T 91
           E K+S  FLG+          PE++ +       +ELT+N+G  S      Y  G     
Sbjct: 61  EMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPR 120

Query: 92  GFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELI 145
           GFGH  I  +DVYK  E     G    ++P  G +KG    +AF+KDPDGY  E+ 
Sbjct: 121 GFGHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKG----LAFIKDPDGYWIEIF 172

Length = 185

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 78.1 bits (192), Expect = 4e-17
 Identities = 54/153 (35%), Positives = 73/153 (47%), Gaps = 34/153 (22%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           +YR+ D   ++ FY+   GM LL++ D PE K+S  F+G+    S               
Sbjct: 80  MYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQ 139

Query: 73  HFVVELTYNYGVTS------YDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP- 121
              +ELT+N+G  S      Y  G     GFGH  I  +DVYK  E     G    ++P 
Sbjct: 140 KATIELTHNWGTESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPN 199

Query: 122 -GPLKGGTTHIAFVKDPDGY---IFELIQRGPT 150
            G +KG    IAF+KDPDGY   IF+L   G T
Sbjct: 200 DGKMKG----IAFIKDPDGYWIEIFDLKTIGTT 228

Length = 233

>gnl|CDD|176706 cd08358, Glo_EDI_BRP_like_21, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 73.9 bits (182), Expect = 2e-16
 Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 27/134 (20%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLR----------TVDKP-EYKYTLAMLGYAEEDQTTVLE 207
            +VG+  ++IKFY + LGMK+LR            + P + K++  M+GY  ED   V+E
Sbjct: 8   FKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVE 67

Query: 208 LTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN-LVTQELGGKITRQPGSIPGLNTKIT 266
           LTYNYG+ +Y  GN +  + I +     +A+  N  VT+   G    +            
Sbjct: 68  LTYNYGIGDYELGNDFLGITIHSKQAVSNAKKHNWPVTEVEDGVYEVK------------ 115

Query: 267 SFVDPDGWKTVLVD 280
               P G+K  L+D
Sbjct: 116 ---APGGYKFYLID 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 127

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 72.1 bits (177), Expect = 6e-16
 Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 12/123 (9%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V LRVGDL +S+ FY   LG KL+  VD  E     A           VLEL  N    
Sbjct: 4   HVALRVGDLEKSLDFYTDVLGFKLVEEVDDGEGPLRSAFF----TAGGRVLELLLNETPP 59

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
                  G+  A +A S DDV  + + +    +  G +I R+PG       + + F DPD
Sbjct: 60  PAAAGFGGHHIAFIAFSVDDVDAAYDRL----KAAGVEIVREPGRHGW-GGRYSYFRDPD 114

Query: 273 GWK 275
           G  
Sbjct: 115 GNL 117

Length = 120

>gnl|CDD|215548 PLN03042, PLN03042, Lactoylglutathione lyase; Provisional

 Score = 71.4 bits (175), Expect = 5e-15
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 43/150 (28%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTV---------- 205
           Q M R+ D   S+ FY + LGM LL+ +D PE K++L  LGY  ED  T           
Sbjct: 30  QTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGY--EDSETAPTDPPERTVW 87

Query: 206 -------LELTYNYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQEL 247
                  +ELT+N+G TE       Y  GN+    +  + I+ DDVYK+ E      ++L
Sbjct: 88  TFGRKATIELTHNWG-TESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKL 142

Query: 248 GGKITRQP--GSIPGLNTKITSFV-DPDGW 274
           G +  ++P  G + GL     +F+ DPDG+
Sbjct: 143 GVEFVKKPDDGKMKGL-----AFIKDPDGY 167

Length = 185

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 8/116 (6%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
            V DL+    FY E  G ++    +  + +Y+   LG       F+  +           
Sbjct: 2   PVSDLEAARAFYEELLGFEV----EEEDGEYAEFRLGLVLALGGFIELIGLP---EPDAP 54

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           G G  H     +D+  LV  ++A GG +   P     G     +V+DPDG + ELI
Sbjct: 55  GGGGVHLYFEVDDLDALVARLKAAGGTILEPPEDTPWG-GREFYVRDPDGNLIELI 109

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|177995 PLN02367, PLN02367, lactoylglutathione lyase

 Score = 66.2 bits (161), Expect = 9e-13
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 39/148 (26%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--------------- 200
           Q M R+ D   S+ FY + LGM LL+ +D PE K++L  +GY +                
Sbjct: 78  QTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTF 137

Query: 201 DQTTVLELTYNYGVTE-------YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGG 249
            Q   +ELT+N+G TE       Y  GN+    +  + I+ DDVYK+ E      +ELG 
Sbjct: 138 GQKATIELTHNWG-TESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGV 192

Query: 250 KITRQP--GSIPGLNTKITSFV-DPDGW 274
           +  ++P  G + G+     +F+ DPDG+
Sbjct: 193 EFVKKPNDGKMKGI-----AFIKDPDGY 215

Length = 233

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 60.2 bits (145), Expect = 2e-11
 Identities = 27/141 (19%), Positives = 43/141 (30%), Gaps = 19/141 (13%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG-----------PE 70
               H    V DL+ +I FYT+  G++L++      +      L F              
Sbjct: 1   MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFF 60

Query: 71  QSHFVVELTYNYGV-TSYDIGT-GFGHFAIATED---VYKLVENIRAKGGNVTREPGPLK 125
                    +   V      G  G GH A   +D       +  +   G  +        
Sbjct: 61  GFEGRAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRG 120

Query: 126 GGTTHIAFVKDPDGYIFELIQ 146
           G      + +DPDG + EL  
Sbjct: 121 G---VHVYFRDPDGILIELAT 138

Length = 138

>gnl|CDD|211348 cd06587, Glo_EDI_BRP_like, This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

 Score = 55.1 bits (133), Expect = 7e-10
 Identities = 32/118 (27%), Positives = 42/118 (35%), Gaps = 13/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V L V DL  ++ FYE  LG ++L            A L        T LEL +     
Sbjct: 1   HVGLTVPDLEAAVAFYEDVLGFEVLERDGGGAE---FAFLRLGG----TRLEL-FEGDEP 52

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
               G     +A   DDV  + E +    +  G +I   P   P        F DPDG
Sbjct: 53  APPSGGGGVHLAFEVDDVDAAVERL----KAAGVEILGGPREEPWGGRVAY-FRDPDG 105

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. Glyoxylase I catalyzes the glutathione-dependent inactivation of toxic methylglyoxal, requiring zinc or nickel ions for activity. The antibiotic resistance proteins in this family use a variety of mechanisms to block the function of antibiotics. Bleomycin resistance protein (BLMA) sequesters bleomycin's activity by directly binding to it. Whereas, three types of fosfomycin resistance proteins employ different mechanisms to render fosfomycin inactive by modifying the fosfomycin molecule. Although the proteins in this superfamily are functionally distinct, their structures are similar. The difference among the three dimensional structures of the three types of proteins in this superfamily is interesting from an evolutionary perspective. Both glyoxalase I and BLMA show domain swapping between subunits. However, there is no domain swapping for type 1 extradiol dioxygenases. Length = 110

>gnl|CDD|176669 cd07245, Glo_EDI_BRP_like_9, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS-HFVVELTYNYGVTSYD 88
           RV DL+ +  FYT+  G   L +   P   +  A+L  G     H + E   +      +
Sbjct: 7   RVPDLEASRAFYTDVLG---LEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPD---ALPE 60

Query: 89  IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
                 H A   +D+      ++A G   T    P   G   + FV+DPDG   EL
Sbjct: 61  GPGRDDHIAFRVDDLDAFRARLKAAGVPYTESDVPG-DGVRQL-FVRDPDGNRIEL 114

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases. Length = 114

>gnl|CDD|176710 cd08362, BphC5-RrK37_N_like, N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 33/123 (26%), Positives = 44/123 (35%), Gaps = 16/123 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                V DL     FY E +G+       V  E     +L       H ++ L       
Sbjct: 6   GVGLGVPDLAAAAAFYREVWGL------SVVAEDDGIVYLR-ATGSEHHILRLR-----R 53

Query: 86  SYDIGTGFGHFAIAT-EDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIF 142
           S         F++A+  DV  L   + A+GG V  EPG     GG     F  DPDG + 
Sbjct: 54  SDRNRLDVVSFSVASRADVDALARQVAARGGTVLSEPGATDDPGGGYGFRFF-DPDGRLI 112

Query: 143 ELI 145
           E  
Sbjct: 113 EFS 115

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxygenases are activated by Fe(II). Length = 120

>gnl|CDD|176702 cd08354, Glo_EDI_BRP_like_13, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.1 bits (123), Expect = 3e-08
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 27/131 (20%)

Query: 27  AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS 86
           A+Y V DL+    FY +  G++L+ K D        AF   G       + L ++ G TS
Sbjct: 5   ALY-VDDLEAAEAFYEDVLGLELMLKED-----RRLAFFWVGGRG----MLLLFDPGATS 54

Query: 87  YDIGTGFGH---------FAIATEDVYKLVENIRAKGGNV---TREPGPLKGGTTHIAFV 134
              G    H         FAI  E++ +   ++ AKG  +    + P     G   + F 
Sbjct: 55  TPGGEIPPHGGSGPGHFAFAIPAEELAEWEAHLEAKGVAIESEVQWP----RGGRSLYF- 109

Query: 135 KDPDGYIFELI 145
           +DPDG + EL 
Sbjct: 110 RDPDGNLLELA 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 122

>gnl|CDD|221708 pfam12681, Glyoxalase_2, Glyoxalase-like domain

 Score = 49.7 bits (119), Expect = 5e-08
 Identities = 26/115 (22%), Positives = 40/115 (34%), Gaps = 12/115 (10%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L V DL  +  FYE+ LG      V++ + +Y    LG        +  +          
Sbjct: 1   LPVSDLEAARAFYEELLGF----EVEEEDGEYAEFRLGLVLALGGFIELIGLP---EPDA 53

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
            G     +    DD+     +V  + +  GG I   P   P    +     DPDG
Sbjct: 54  PGGGGVHLYFEVDDL---DALVARL-KAAGGTILEPPEDTPW-GGREFYVRDPDG 103

This domain is related to the Glyoxalase domain pfam00903. Length = 109

>gnl|CDD|211350 cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE)

 Score = 50.2 bits (121), Expect = 6e-08
 Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLL-RKRDVPEEKYSNAFLGFGP----------EQSHF 74
           H    V DL+  +KFY +  G+    R+    E+    AFLG G           + S  
Sbjct: 3   HIGIAVPDLEAALKFYRDVLGVGPWEREEVPSEQGVRLAFLGLGNVQIELIEPLDDDSPI 62

Query: 75  VVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVT-REPGPLKGGTTHIAF 133
              L           G G  H A   +D+   +  ++A+G  +    P    GG   +AF
Sbjct: 63  AKFLEKR--------GEGLHHIAFEVDDIDAALARLKAQGVRLLQEGPRIGAGG-KRVAF 113

Query: 134 V--KDPDGYIFELIQ 146
           +  KD  G + EL++
Sbjct: 114 LHPKDTGGVLIELVE 128

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases. Length = 128

>gnl|CDD|213772 TIGR03081, metmalonyl_epim, methylmalonyl-CoA epimerase

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H    V DL+   KFY +  G ++    ++PE+     F+  G  +   +  L  + 
Sbjct: 1   RIDHVGIAVPDLEEAAKFYEDVLGAQVSEIEELPEQGVKVVFIALGNTKVELLEPLGEDS 60

Query: 83  GVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV--KDPD 138
            +  +    G G  H AI  +D+   +E ++ KG  +  E   +      +AF+  K   
Sbjct: 61  PIAKFLEKNGGGIHHIAIEVDDIEAALETLKEKGVRLIDEEPRIGAHGKPVAFLHPKSTG 120

Query: 139 GYIFELIQ 146
           G + EL Q
Sbjct: 121 GVLIELEQ 128

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer. Length = 128

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 23/125 (18%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R      RV DL+R++ FY +  G+++L + D      S A LG G ++   V+E   + 
Sbjct: 2   RIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGGKRPLLVLEEDPDA 55

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR----EPGPLKGGTTHI---AF-V 134
                   TG  HFAI       L+ + RA      R       PL+G + H+   A  +
Sbjct: 56  PPAPPG-TTGLYHFAI-------LLPS-RADLARALRRLIELGIPLEGASDHLVSEALYL 106

Query: 135 KDPDG 139
            DP+G
Sbjct: 107 SDPEG 111

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 27/121 (22%), Positives = 36/121 (29%), Gaps = 19/121 (15%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-----GVT 85
             D +R   FY   FG             Y  A    G      +++          G  
Sbjct: 8   TTDPERAKAFYGAVFGWTF-EDMGDGGGDY--AVFSTGGGAVGGLMKAPEPAAGSPPGWL 64

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
            Y           A +DV      + A GG V   P  +  G    A   DP+G +F L 
Sbjct: 65  VY----------FAVDDVDAAAARVEAAGGKVLVPPTDI-PGVGRFAVFADPEGAVFGLW 113

Query: 146 Q 146
           Q
Sbjct: 114 Q 114

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|176666 cd07242, Glo_EDI_BRP_like_6, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL+R+  FY    G+    +    E+  S      G   ++ V++        
Sbjct: 4   HVELTVRDLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGG---TYLVLQQADGESAG 60

Query: 86  SYDI-GTGFGHFAI---ATEDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKDPDG 139
            +D    G  H A    + E V +L   +  +G  +   P      G   +  F +DPDG
Sbjct: 61  RHDRRNPGLHHLAFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDG 120

Query: 140 YIFELI 145
              EL+
Sbjct: 121 IRLELV 126

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 128

>gnl|CDD|223423 COG0346, GloA, Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

 Score = 44.4 bits (104), Expect = 8e-06
 Identities = 26/131 (19%), Positives = 39/131 (29%), Gaps = 17/131 (12%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--- 212
            V L V DL  SI FY   LG++L++             L + + D      L +     
Sbjct: 5   HVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEG 64

Query: 213 ----------GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN 262
                      +           +A   DD       +  +  + G +I        G  
Sbjct: 65  RAGTGFVGDVALGVPGGDLGLGHLAFEVDDEAFGDAALAFLDPD-GVRIELGEPGRGG-- 121

Query: 263 TKITSFVDPDG 273
                F DPDG
Sbjct: 122 -VHVYFRDPDG 131

Length = 138

>gnl|CDD|176696 cd08348, BphC2-C3-RGP6_C_like, The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 33/147 (22%), Positives = 49/147 (33%), Gaps = 22/147 (14%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNA-----FLGFGPEQSHFVVE 77
           R  H V  V DL+  ++FY +  G                      FL   P++ H +  
Sbjct: 1   RLSHVVLYVRDLEAMVRFYRDVLGFT---------VTDRGPLGGLVFLSRDPDEHHQIAL 51

Query: 78  LTYNYGVTSYDIGTGFGHFAIATEDVYKLVEN---IRAKGGNVTREPGPLKGGTTHIAFV 134
           +T            G  H A   + +  L +    +RA G  +T    P+  G     + 
Sbjct: 52  ITGRPAAPPPG-PAGLNHIAFEVDSLDDLRDLYERLRAAG--IT-PVWPVDHGNAWSIYF 107

Query: 135 KDPDGYIFELIQRGP-TPEPLCQVMLR 160
           +DPDG   EL    P         ML 
Sbjct: 108 RDPDGNRLELFVDTPWYVAQAAAFMLD 134

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are one-domain dioxygenases, which form hexamers. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, its two domains do not belong to this subfamily. Length = 134

>gnl|CDD|213698 TIGR02295, HpaD, 3,4-dihydroxyphenylacetate 2,3-dioxygenase

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 30/173 (17%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL-GFGPEQSHFVVELTYN 81
           R  H   RV DLD++ +FY +  G +        E      +L G    Q H +V     
Sbjct: 4   RTGHVELRVTDLDKSREFYVDLLGFR------ETESDKEYIYLRGIEEFQHHSLVLTKAP 57

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
               SY      G      ED+ K  +  +  G  V       +        V+DP GY 
Sbjct: 58  SAALSY-----IGFRVSKEEDLDKAADFFQKLGHPVRLVRDGGQPEALR---VEDPFGYP 109

Query: 142 FEL---------------IQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
            E                  RG +P  L    + V D+ R+++FY++ LG ++
Sbjct: 110 IEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFVPDVQRALRFYKEELGFRV 162

This enzyme catalyzes the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. 4-hydroxyphenylacetate arises from the degradation of tyrosine. The substrate, 3,4-dihydroxyphenylacetate (homoprotocatechuate) arises from the action of a hydroxylase on 4-hydroxyphenylacetate. The aromatic ring is opened by this dioxygenase exo to the 3,4-diol resulting in 2-hydroxy-5-carboxymethylmuconate semialdehyde. The enzyme from Bacillus brevis contains manganese. Length = 294

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 32/119 (26%), Positives = 42/119 (35%), Gaps = 20/119 (16%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-- 216
           L V DL R+  FYEK  G       D  E +Y +     A+             G     
Sbjct: 15  LPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVF---PADGAGAG--------GGLMAR 63

Query: 217 --YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                G     +  + DD+  + E V       GGK+ R     PG    I  FVDP+G
Sbjct: 64  PGSPPGGGGWVIYFAVDDIDATLERV----VAAGGKVLRPKTEFPGGGR-IAHFVDPEG 117

Length = 127

>gnl|CDD|176676 cd07253, Glo_EDI_BRP_like_2, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +R  H V  V D++ T+ FYT   GM+++R  +    + +   L FG ++ +    +   
Sbjct: 2   KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGE-EVGRKA---LRFGSQKINL-HPVGGE 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYK-LVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPD 138
           +   +   G G     + TE     LV ++ A G  +   P P  G  G     + +DPD
Sbjct: 57  FEPAAGSPGPGSDDLCLITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPD 116

Query: 139 GYIFEL 144
           G + EL
Sbjct: 117 GNLIEL 122

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

>gnl|CDD|211353 cd07263, Glo_EDI_BRP_like_16, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 15/128 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGP---EQSHFVVELTYN 81
                V D D+ + FYTE  G ++  + DVP    +   ++   P    ++  V  L   
Sbjct: 1   LVSLYVDDQDKALAFYTEKLGFEV--REDVPMGGGFR--WVTVAPPGSPETSLV--LAPP 54

Query: 82  YGVTSYDIGT---GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
               +   G    G     + T+D+    E ++A+G   T EP  +  GT  +A  +DPD
Sbjct: 55  ANPAAMASGLQPGGTPGLVLVTDDIDATYEELKARGVEFTEEPREMPYGT--VAVFRDPD 112

Query: 139 GYIFELIQ 146
           G +F L+Q
Sbjct: 113 GNLFVLVQ 120

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|211356 cd08346, PcpA_N_like, N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

 Score = 42.2 bits (100), Expect = 4e-05
 Identities = 31/130 (23%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRK---RDVPEEK---YSNAFLGFGPEQSHFVVELT 79
           H      D   T+ FYT+  G++L++K   +D P      + +     G   + F     
Sbjct: 4   HVTLVTRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDA 63

Query: 80  YNYGVTSYDIGTG-FGH--FAIATED-VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVK 135
              G      G G   H  F++ +E  +    E +RA G  V+   G +        + +
Sbjct: 64  GPKGRR----GPGQIHHIAFSVPSEASLEAWRERLRAAGVPVS---GVVDRFGERSLYFE 116

Query: 136 DPDGYIFELI 145
           DPDG   EL 
Sbjct: 117 DPDGIRLELT 126

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. Length = 126

>gnl|CDD|222305 pfam13669, Glyoxalase_4, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 25/110 (22%), Positives = 37/110 (33%), Gaps = 3/110 (2%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD    F+ +  G+          +    AF   G +     VEL       
Sbjct: 2   HIGIVVPDLDAAAAFWVDLLGLGPWGDYRDEPQNVDLAFARLG-DGPAVEVELIQPLDGE 60

Query: 86  SYDI--GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           S+    G G  H A   +D+   V  + A+G  V  +          +AF
Sbjct: 61  SFLDKGGPGLHHIAYWVDDLDAAVARLEAQGVRVAPKGPRAGAAGRRVAF 110

Length = 110

>gnl|CDD|225861 COG3324, COG3324, Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 31/123 (25%), Positives = 42/123 (34%), Gaps = 20/123 (16%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAF------LGFGPEQSHFVVELTYNYG 83
            V DL+R   FY + FG       D+ E +Y+          G    +           G
Sbjct: 16  PVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGG---G 72

Query: 84  VTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFE 143
              Y           A +D+   +E + A GG V R      GG     FV DP+G  F 
Sbjct: 73  WVIY----------FAVDDIDATLERVVAAGGKVLRPKTEFPGGGRIAHFV-DPEGNRFG 121

Query: 144 LIQ 146
           L  
Sbjct: 122 LWS 124

Length = 127

>gnl|CDD|211355 cd08343, ED_TypeI_classII_C, C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 16/124 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H V R  D+  T  FYT+  G + +  R       + A+L    ++ H +        + 
Sbjct: 2   HVVLRTPDVAATRAFYTDVLGFR-VSDRVGDPGVLAAAWLRCD-DEHHDL-------ALF 52

Query: 86  SYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKDPDGY 140
               G G  H A   E   D+ +  + + A G  +  E GP + G  +  F   +DPDG 
Sbjct: 53  PGPEGPGLHHVAFEVESLDDIKRAGDRLAANG--IQIEWGPGRHGPGNNLFLYFRDPDGN 110

Query: 141 IFEL 144
             EL
Sbjct: 111 RIEL 114

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are type I, class II enzymes, and are composed of the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. A catalytically essential metal, Fe(II) or Mn(II), presents in all the enzymes in this family. Length = 131

>gnl|CDD|211357 cd08349, BLMA_like, Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY 87
           V  V D+++++ FY +  G ++  +   PE  Y  A +     Q H              
Sbjct: 3   VLPVSDIEKSLAFYRDVLGFEVDFEH--PEPLY--AQVSRDGAQLHL--SEHDGDEWVPL 56

Query: 88  DIGTGFGHFAIATEDVYKLVENIRAKG-GNVTREPGPLKGGTTHIAFVKDPDGYI 141
             G       I  +DV  L   ++AKG   +   P     G    A V+DPDG +
Sbjct: 57  GRGGN---VYIEVDDVDALYAELKAKGAKLIVYPPEDQPWGQREFA-VQDPDGNL 107

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the larger superfamily, this family contains members with or without domain swapping. Length = 112

>gnl|CDD|211351 cd07251, Glo_EDI_BRP_like_10, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 29/124 (23%), Positives = 47/124 (37%), Gaps = 22/124 (17%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
           V DL R+  FY    G K     D  +     AF   G      V+ L +     + D G
Sbjct: 6   VADLARSRAFYRA-GGWK--TSADSNDGV---AFFQLG----GLVLAL-FPREELAKDAG 54

Query: 91  -----TGFGHFAIA-----TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
                 GF    +A      ++V  ++    A G  + + P  +  G     +  DPDG+
Sbjct: 55  VPVPPPGFSGITLAHNVRSEDEVDAVLARAAAAGATIVKPPQKVFWGGYS-GYFADPDGH 113

Query: 141 IFEL 144
           ++E+
Sbjct: 114 LWEV 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 120

>gnl|CDD|176693 cd08345, Fosfomycin_RP, Fosfomycin resistant protein; inhibits the biological function of fosfomycin

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 17/122 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY---SNAFLGFGPEQSHFVVELTYNY 82
           H    V DL+++I FY +  G +L+      +E Y   +  ++    E S    E TY +
Sbjct: 1   HITLIVKDLNKSIAFYRDILGAELIYSSS--KEAYFELAGLWICLMEEDSLQGPERTYTH 58

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                        F I +E+  +  E ++A G  +  E   ++G    I F  DPDG++ 
Sbjct: 59  IA-----------FQIQSEEFDEYTERLKALGVEMKPERPRVQGEGRSIYFY-DPDGHLL 106

Query: 143 EL 144
           EL
Sbjct: 107 EL 108

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases. Length = 113

>gnl|CDD|176671 cd07247, SgaA_N_like, N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L   D  R+  FY    G      +      Y   +          +++           
Sbjct: 6   LPTTDPERAKAFYGAVFGWT-FEDMGDGGGDYA--VFSTGGGAVGGLMKAP-----EPAA 57

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                  V  + DDV  +A  V    +  GGK+   P  IPG+  +   F DP+G
Sbjct: 58  GSPPGWLVYFAVDDVDAAAARV----EAAGGKVLVPPTDIPGV-GRFAVFADPEG 107

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a streptomycin resistance protein. Length = 114

>gnl|CDD|222152 pfam13468, Glyoxalase_3, Glyoxalase-like domain

 Score = 39.6 bits (93), Expect = 6e-04
 Identities = 35/150 (23%), Positives = 50/150 (33%), Gaps = 31/150 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFG----------PEQS--- 72
           H V  V DLD  +  + +  G  L      P     NA L FG          PE     
Sbjct: 3   HLVVAVPDLDEAVARFEDRLGFTLTPGGRHPGMGTHNALLYFGDGYLELLAIDPEAPAPD 62

Query: 73  ---HFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT- 128
               F ++            G G   +A+ T+D+  +   +RA G +         GG  
Sbjct: 63  GGRWFGLDRL--------AGGPGLSGWALRTDDIDAVAARLRAAGLDFGG-RVRPDGGDL 113

Query: 129 -THIAFVKDPD---GYIF-ELIQRGPTPEP 153
              +A   D D   G +   LIQ G +   
Sbjct: 114 RWRLAVPADGDLPAGGLLPFLIQWGTSHPA 143

This domain is related to the Glyoxalase domain pfam00903. Length = 174

>gnl|CDD|176683 cd07262, Glo_EDI_BRP_like_19, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.3 bits (90), Expect = 7e-04
 Identities = 31/126 (24%), Positives = 43/126 (34%), Gaps = 18/126 (14%)

Query: 24  FLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
             H    V DL+R   FY       G+K +        +     +G+G         +T 
Sbjct: 1   IDHVTLGVNDLERARAFYDAVLAPLGIKRVM-------EDGPGAVGYGKGGGGPDFWVTK 53

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREPG--PLKGGTTHIAFV 134
            +       G G  H A A       V+   A     GG     PG  P  G   + A+V
Sbjct: 54  PFDGEPATAGNGT-HVAFAAPSREA-VDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYV 111

Query: 135 KDPDGY 140
           +DPDG 
Sbjct: 112 RDPDGN 117

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 123

>gnl|CDD|211352 cd07255, Glo_EDI_BRP_like_12, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 13/26 (50%), Positives = 18/26 (69%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLR 181
            V LRV DL RS+ FY+  LG+++L 
Sbjct: 5   AVTLRVADLERSLAFYQDVLGLEVLE 30

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. Length = 125

>gnl|CDD|211358 cd08352, Glo_EDI_BRP_like_1, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 38/118 (32%), Positives = 49/118 (41%), Gaps = 9/118 (7%)

Query: 33  DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY--NYGV-TSYDI 89
           D  R+ +FY E  G+ L+R+   PE K     L    E     +EL    N     SY  
Sbjct: 13  DYARSKEFYVEVLGLTLIRETYRPERKSYKLDLALNGEY---QIELFSFPNPPPRPSYPE 69

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAFVKDPDGYIFELIQ 146
             G  H A A ED+   V  ++A G  V  EP  +   T     F  DPDG   EL +
Sbjct: 70  ACGLRHLAFAVEDIEAAVAELKAHG--VEVEPIRVDEFTGKRFTFFYDPDGLPLELYE 125

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping. Length = 125

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	291
PLN02300	286	lactoylglutathione lyase	100.0
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	100.0
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	100.0
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	100.0
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	100.0
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.91
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	99.87
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.85
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.84
PLN02367	233	lactoylglutathione lyase	99.84
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.83
PRK10291	129	glyoxalase I; Provisional	99.83
PLN02367	233	lactoylglutathione lyase	99.83
PLN03042	185	Lactoylglutathione lyase; Provisional	99.81
PRK10291	129	glyoxalase I; Provisional	99.81
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	99.81
PRK11478	129	putative lyase; Provisional	99.8
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.8
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.8
PLN03042	185	Lactoylglutathione lyase; Provisional	99.79
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.78
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.78
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.77
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.77
PLN02300	286	lactoylglutathione lyase	99.77
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.77
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.77
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.76
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.75
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.75
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.75
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.75
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.74
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.74
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.73
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.73
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.73
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.73
PRK11478	129	putative lyase; Provisional	99.73
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.72
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.72
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.72
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.71
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.71
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.71
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.71
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.71
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.7
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.7
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.69
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.69
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.69
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.69
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.69
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.68
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.68
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.68
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.68
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.68
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.67
PRK06724	128	hypothetical protein; Provisional	99.67
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.67
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.67
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.67
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.66
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.66
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.66
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.66
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.66
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.66
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.66
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.66
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.65
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.65
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.65
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.65
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.65
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.65
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.65
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.65
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.65
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.65
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.65
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.65
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.65
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.65
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.64
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.64
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.64
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.64
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.64
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.64
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.63
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.63
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.63
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.63
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.63
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.62
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.62
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.62
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.62
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.62
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.62
PRK06724	128	hypothetical protein; Provisional	99.62
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	99.62
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.61
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.61
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.6
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.6
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	99.6
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.6
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.6
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.6
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.6
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.59
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.59
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.59
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.58
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.58
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.58
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.58
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.58
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.58
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.58
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.56
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.56
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.56
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.56
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.55
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.55
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.55
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.55
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.55
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.54
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.54
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.54
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.54
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.54
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.54
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	99.53
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.53
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.53
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.52
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.52
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	99.51
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.5
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.49
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.49
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.48
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.47
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	99.46
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.45
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.44
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	99.44
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.43
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.34
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	99.22
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.22
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	99.17
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	99.16
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	99.09
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.07
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.06
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	99.04
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.01
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.01
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.96
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	98.96
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.92
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.91
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.88
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.83
COG3607	133	Predicted lactoylglutathione lyase [General functi	98.69
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.62
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	98.52
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	98.51
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.45
PRK10148	147	hypothetical protein; Provisional	98.34
PRK10148	147	hypothetical protein; Provisional	98.3
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	98.16
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	98.06
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	97.73
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.79
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	96.35
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	96.25
PF15067	236	FAM124: FAM124 family	96.14
PF15067	236	FAM124: FAM124 family	93.66
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	93.05
PRK11700	187	hypothetical protein; Provisional	84.85
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	82.44
PF06185	185	YecM: YecM protein; InterPro: IPR010393 This famil	80.99

>PLN02300 lactoylglutathione lyase

Probab=100.00  E-value=5.2e-44  Score=301.60  Aligned_cols=283  Identities=80%  Similarity=1.316  Sum_probs=229.1

Q ss_pred             CCCCccccchhccCCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeecc
Q 022871            2 AEASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN   81 (291)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (291)
                      |.+|-+.+++...+++++.|.++.|++|.|+|++++++||+++|||++..+...+...+...++..++...++.+++...
T Consensus         3 ~~~~~~~~~~~~~~~~~~~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~   82 (286)
T PLN02300          3 AAASTAAEAEDLLEWPKKDKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYN   82 (286)
T ss_pred             cccccChhhhhhhcCCccccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEecc
Confidence            45677778888999999999999999999999999999999999999987655555555567776655445566666554


Q ss_pred             CCCCcccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCCceeEEeee
Q 022871           82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v  161 (291)
                      .+......+.|+.|++|.|+|+++++++|+++|+++...+...+++...++||+||+|+.|||++....+.++.|+.|.|
T Consensus        83 ~~~~~~~~~~g~~hia~~v~dvd~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~~~~~~~l~~  162 (286)
T PLN02300         83 YGVDKYDIGTGFGHFGIAVEDVAKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPEPLCQVMLRV  162 (286)
T ss_pred             CCCCccccCCCccEEEEEeCCHHHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCcceeEEEEe
Confidence            33333445568899999999999999999999999888777766655556889999999999999988899999999999


Q ss_pred             CCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHHHHH
Q 022871          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~~l~  241 (291)
                      +|++++.+||+++|||++......++..+...++..+.......+++..+.+...+..+++.+|++|.|+|++++++++ 
T Consensus       163 ~d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di~~~~~~~-  241 (286)
T PLN02300        163 GDLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDVYKTAEAI-  241 (286)
T ss_pred             CCHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCHHHHHHHH-
Confidence            9999999999999999987654444455666665532222234566655443333345678999999999999999999 


Q ss_pred             HHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhhh
Q 022871          242 LVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI  288 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~~  288 (291)
                         +++|++++.+|...|+.+++.++|+||+|+.++|+++.++.+++
T Consensus       242 ---~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~~~~~~~  285 (286)
T PLN02300        242 ---KLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNIDFLKEL  285 (286)
T ss_pred             ---HHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccchhhhhc
Confidence               99999999998888865558899999999999999999999886

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=100.00  E-value=2.7e-31  Score=226.62  Aligned_cols=238  Identities=21%  Similarity=0.244  Sum_probs=162.3

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++++|+.|.|+|++++++||+++|||++..+...      .+++.......+..+.+...       ...++.|++|.|
T Consensus         2 i~~i~Hi~l~V~Dle~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-------~~~g~~hiaf~v   68 (303)
T TIGR03211         2 VMRLGHVELRVLDLEESLKHYTDVLGLEETGRDGQ------RVYLKAWDEWDHYSVILTEA-------DTAGLDHMAFKV   68 (303)
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCEEeeecCc------eEEEEeccccccceEeeccC-------CCCceeEEEEEe
Confidence            67899999999999999999999999998765321      23333211111222322211       234789999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC---------------------CCCcee
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~---------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+.+...+.....+....++|+||+|+.+||......                     ..+++|
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H  148 (303)
T TIGR03211        69 ESEADLERLVKRLEAYGVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKEYVGELVGGLNPDPWPDPLRGVGARRLDH  148 (303)
T ss_pred             CCHHHHHHHHHHHHHcCCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccccccccccccCCcccccccCCcCceeEEE
Confidence            7   7889999999999998755432211222348999999999999985421                     235899


Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcce-eEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      |+|.|+|++++.+||+++|||++......+++.. ...++..+..  ...+.+..  .    +....+.|++|.|+|+++
T Consensus       149 i~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~----~~~g~~~Hiaf~v~~~~~  220 (303)
T TIGR03211       149 CLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK--AHDIAFVG--D----PEPGKLHHVSFFLDSWED  220 (303)
T ss_pred             EeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC--Ccccceec--C----CCCCceEEEEEEcCCHHH
Confidence            9999999999999999999999866543333221 2233332221  22232211  0    112248899999997544


Q ss_pred             hHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      ..+. .++|+++|+++..+|..++...++++||+||+|++|||+.
T Consensus       221 v~~~-~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       221 VLKA-ADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             HHHH-HHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            3322 2444999999888887665434578999999999999983

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=100.00  E-value=3.5e-31  Score=225.06  Aligned_cols=237  Identities=23%  Similarity=0.271  Sum_probs=164.4

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      +|.+++|+.|.|+|++++.+||+++|||++..+..      ...++..........+.+...       ...++.|++|.
T Consensus         1 ~i~~i~hv~l~v~Dl~~s~~FY~~vLGl~~~~~~~------~~~~~~~~~~~~~~~l~l~~~-------~~~~~~hiaf~   67 (294)
T TIGR02295         1 NILRTGHVELRVTDLDKSREFYVDLLGFRETESDK------EYIYLRGIEEFQHHSLVLTKA-------PSAALSYIGFR   67 (294)
T ss_pred             CCceeeEEEEEeCCHHHHHHHHHHccCCEEEEecC------CeEEEeccCcCCceEEEeeeC-------CCcCccEEEEE
Confidence            47899999999999999999999999999876532      123443211111122222211       23478899999


Q ss_pred             eC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC---------------CCCCceeEEeee
Q 022871          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLRV  161 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~---------------~~~~~~hv~l~v  161 (291)
                      |+   |+++++++|+++|+++...+.  +.+. ..++|+||+|+.+||+....               .+.++.|++|.|
T Consensus        68 v~~~~dl~~~~~~l~~~Gv~v~~~~~--~~~~-~~~~~~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~~i~Hv~l~v  144 (294)
T TIGR02295        68 VSKEEDLDKAADFFQKLGHPVRLVRD--GGQP-EALRVEDPFGYPIEFYFEMEKVERLLRRYHRHRGVSPVRLDHFNVFV  144 (294)
T ss_pred             eCCHHHHHHHHHHHHhcCCcEEeecC--CCCc-eEEEEECCCCCEEEEEEchhhcccccccccccCCccceeeeeEEEEe
Confidence            97   789999999999999876432  2222 45899999999999987331               235689999999


Q ss_pred             CCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHHHHH
Q 022871          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~~l~  241 (291)
                      .|++++.+||+++|||++........+.....++.....  .+.+.+..       ..+++++|++|.|+|.+++ ..+.
T Consensus       145 ~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~~~Hiaf~v~d~~~v-~~~~  214 (294)
T TIGR02295       145 PDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGG--VHDIALTN-------GNGPRLHHIAYWVHDPLNI-IKAC  214 (294)
T ss_pred             CCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCC--cCceEeec-------CCCCceeeEEEEcCCHHHH-HHHH
Confidence            999999999999999997655433333323334432221  22333321       1246889999999995543 2333


Q ss_pred             HHHHHhCCe--eecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          242 LVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       242 ~~~~~~G~~--~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      ++|+++|++  +...|.++..++.+++|++||+|++|||+...
T Consensus       215 ~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       215 DILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             HHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            444999997  66677665544457899999999999998744

The enzyme from Bacillus brevis contains manganese.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=100.00  E-value=6e-32  Score=208.13  Aligned_cols=259  Identities=50%  Similarity=0.854  Sum_probs=216.0

Q ss_pred             ccCCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----------CceeeEEEecCCCCceeEEEeecc
Q 022871           13 LLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYN   81 (291)
Q Consensus        13 ~~~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~   81 (291)
                      ...+++.+-.+..|+++.|.|..++++||+++|||++...++.+.           +.|.-.++++|+...+++++++.+
T Consensus         7 ~~~~~~~~~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYN   86 (299)
T KOG2943|consen    7 LLCWMKADTRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYN   86 (299)
T ss_pred             hhhhhhccchheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEec
Confidence            446777788999999999999999999999999999998877776           688889999999999999999999


Q ss_pred             CCCCcccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCCceeEEeee
Q 022871           82 YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRV  161 (291)
Q Consensus        82 ~~~~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v  161 (291)
                      +++..+..|.++-||.+.++|+-...+.+...|.+        . +....+++.||||+.|++.+..+.+.++..|.|+|
T Consensus        87 YgV~~YelGndfg~i~I~s~dv~~~ve~v~~p~~~--------~-~g~~~~~v~dPdGykF~l~~~~p~s~pv~~V~l~V  157 (299)
T KOG2943|consen   87 YGVSKYELGNDFGGITIASDDVFSKVEKVNAPGGK--------G-SGCGIAFVKDPDGYKFYLIDRGPQSDPVLQVMLNV  157 (299)
T ss_pred             cCccceeccCCcccEEEeHHHHHHHHHHhcCcCCc--------c-cceEEEEEECCCCcEEEEeccCCCCCCeEEEEEEe
Confidence            99999999999999999999998877777666542        1 22334889999999999999888999999999999


Q ss_pred             CCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHHHHH
Q 022871          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVN  241 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~~l~  241 (291)
                      +|+++++.||.+.||+++.+.    +..++..+++++++  ...|+|+.+.+......+.+...+++..+++..+.+.+ 
T Consensus       158 gdL~ks~kyw~~~lgM~ilek----eek~t~~~mgYgd~--q~~LElt~~~~~id~~kg~griafaip~d~~~~l~e~i-  230 (299)
T KOG2943|consen  158 GDLQKSIKYWEKLLGMKILEK----EEKYTRARMGYGDE--QCVLELTYNYDVIDRAKGFGRIAFAIPTDDLPKLQEAI-  230 (299)
T ss_pred             hhHHHHHHHHHHHhCcchhhh----hhhhhhhhhccCCc--ceEEEEEeccCcccccccceeEEEeccccccccHHHHH-
Confidence            999999999999999998764    33456667777655  58999999988877667667677777788888888888 


Q ss_pred             HHHHHhCCeeecCCcc--cCCCC-ceEEEEECCCCCeEEEEechhhhhhhhc
Q 022871          242 LVTQELGGKITRQPGS--IPGLN-TKITSFVDPDGWKTVLVDNEDFLKEIQS  290 (291)
Q Consensus       242 ~~~~~~G~~~~~~p~~--~~~~~-~~~~~~~Dp~G~~iel~~~~~~~~~~~~  290 (291)
                         +..+.++..+..+  .|+.. ..+.-+.||||+.|+|+...++.+..++
T Consensus       231 ---K~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdde~F~~lsk~  279 (299)
T KOG2943|consen  231 ---KSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDDEGFRKLSKI  279 (299)
T ss_pred             ---HHhccccccceeeccCCCcceeEEEEEECCCCceEEEeccHHHHHHhcc
Confidence               8887777666544  34422 2446679999999999999998877654

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=100.00  E-value=2.8e-30  Score=218.52  Aligned_cols=237  Identities=17%  Similarity=0.219  Sum_probs=164.1

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      |+++.|++|.|+|++++.+||+++|||+...+..  .+   ..|+..+.....  +.+....       ..++.|++|.|
T Consensus         1 ~~~i~~v~l~V~Dl~~s~~FY~~~LGl~~~~~~~--~~---~~~~~~~~~~~~--~~l~~~~-------~~~~~~~~f~V   66 (286)
T TIGR03213         1 VRGLGYLGIGVSDVDAWREFATEVLGMMVASEGE--ND---ALYLRLDSRAHR--IAVHPGE-------SDDLAYAGWEV   66 (286)
T ss_pred             CceeeEEEEEeCCHHHHHHHHHhccCcccccCCC--Cc---eEEEEcCCCceE--EEEEECC-------cCCeeeEeeee
Confidence            5789999999999999999999999999765422  11   235455432222  2222211       13678999999


Q ss_pred             CC---HHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEeCCCC------------------CCCceeE
Q 022871          101 ED---VYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQV  157 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~hv  157 (291)
                      +|   ++++.++|+++|+++...+...  ..+....++|.||+||.+|+......                  +.++.||
T Consensus        67 ~~~~~l~~~~~~L~~~Gv~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  146 (286)
T TIGR03213        67 ADEAGLDQVKEKLEKAGVAVTVASAAEARERGVLGLIKFTDPGGNPLEIYYGAVEDFEKPFVSPRAVSGFVTGDQGLGHI  146 (286)
T ss_pred             CCHHHHHHHHHHHHHcCCceEECCHHHhhhccceEEEEEECCCCCEEEEEEcccccCCCCCCCCCCCCccccCCccccEE
Confidence            88   8899999999999987654321  12233458999999999999964321                  2268899


Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeeccCC--c-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchh
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPE--Y-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~  234 (291)
                      .|.|+|++++.+||+++|||++........  + .+...++...+.  ++.+.+.. .     +..++++|++|.|+|++
T Consensus       147 ~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~--~~~~~l~~-~-----~~~~~~~Hiaf~v~d~~  218 (286)
T TIGR03213       147 VLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNER--HHSLAFAA-G-----PSEKRLNHLMLEVDTLD  218 (286)
T ss_pred             EEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCC--cceEEEec-C-----CCCCceEEEEEEcCCHH
Confidence            999999999999999999999876532211  1 112344543222  33344422 1     12457899999999866


Q ss_pred             hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          235 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      ++ .++.++|+++|+ ....|.+++.++.+++|++||+|++||+...
T Consensus       219 ~v-~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       219 DV-GLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             HH-HHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            53 222344499999 5667777665567889999999999999864

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.91  E-value=1.3e-22  Score=175.92  Aligned_cols=224  Identities=22%  Similarity=0.368  Sum_probs=152.3

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC--CCcc--cCCCCeeEEE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG--VTSY--DIGTGFGHFA   97 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~--~~~~g~~~i~   97 (291)
                      .+++|+.+.|+|++++++||++.|||+...+.....+. ..+.+..|  +..+.+.......  ...+  ..|+|++|+|
T Consensus         1 ~~i~hi~~~V~D~~~a~~~y~~~LGf~~~~~~~~~~~~-~~~~~~~G--~~~l~L~~~~~~~s~~~~~~~~hg~gv~~ia   77 (353)
T TIGR01263         1 DGFDFVEFYVGDAKQAAYYYFTRFGFEKVAKETGHREK-ASHVLRQG--QINFVLTAPYSSDSPAADFAAKHGDGVKDVA   77 (353)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCcEEEEeecCCce-eEEEEEeC--CEEEEEecCCCCCchHHHHHHhCCCceEEEE
Confidence            36899999999999999999999999998773322221 22333432  3333332221111  1111  2678999999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC---------------------C----CC
Q 022871           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP---------------------T----PE  152 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~---------------------~----~~  152 (291)
                      |.|+|++++++++.++|+.+..+|.....|...+..++.++|..+.|++...                     .    ..
T Consensus        78 f~V~Dv~~a~~~l~~~Ga~~v~~p~~~~~g~~~~~~i~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (353)
T TIGR01263        78 FRVDDAAAAFEAAVERGAEPVQAPVELDEGAVTLATIKGIGDVVHTLVDRGGYKGSFYPGFFESLLDAALHEPPPGVGLI  157 (353)
T ss_pred             EEECCHHHHHHHHHHCCCEeccCCccCCCCeEEEEEEECcCCCEEEEEcCCCCCCCCCCCccccccccccccCCCCCCeE
Confidence            9999999999999999999887765441123333445666777777666321                     0    12


Q ss_pred             CceeEEeeeC--CccccHHHHHhhhCCeeeeeeccCC--cc-eeEEEecccCCCceeEEEeeeecCc---c------eec
Q 022871          153 PLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YK-YTLAMLGYAEEDQTTVLELTYNYGV---T------EYT  218 (291)
Q Consensus       153 ~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~l~l~~~~~~---~------~~~  218 (291)
                      .++|++++|.  |++++..||+++|||++........  .. .+..+..   ..+...++|..+...   .      ..+
T Consensus       158 ~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~---~~g~~~i~L~ep~~~~~~s~i~~fl~~~  234 (353)
T TIGR01263       158 AIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMAS---PDGKVKIPLNEPASGKDKSQIEEFLEFY  234 (353)
T ss_pred             EeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEEC---CCCcEEEEEeccCCCCCCCHHHHHHHHc
Confidence            4899999999  9999999999999999876544221  11 1222222   122466777653211   1      123


Q ss_pred             cCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCC
Q 022871          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       219 ~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      .|+|++||||.|+|+++++++|    +++|++++..|
T Consensus       235 ~g~Gv~HiAf~vdDi~~~~~~l----~~~Gv~~l~~P  267 (353)
T TIGR01263       235 NGAGVQHIALNTDDIVRTVRAL----RARGVEFLDTP  267 (353)
T ss_pred             CCCCccEEEEEcCCHHHHHHHH----HHcCCccCcCC
Confidence            4789999999999999999999    99999998877

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=99.87  E-value=2.2e-20  Score=160.63  Aligned_cols=224  Identities=17%  Similarity=0.256  Sum_probs=159.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCc--eeeEEEecCCCCceeEEEeeccCC------------------
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYNYG------------------   83 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------------------   83 (291)
                      ++||.+.|.|...+..||+..|||+.+.......+.  .....++  ++...+++.-.....                  
T Consensus         1 ~dhvef~v~da~~~~~~f~~~~GF~~~a~~~~~tg~~~~~s~~~r--~g~i~fv~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (398)
T PLN02875          1 FHHVEFWCGDATNTARRFSWGLGMPLVAKSDLTTGNTTYASYLLR--SGDLVFLFTAPYSPKIGAGDDDPASTAPHPSFS   78 (398)
T ss_pred             CeEEEEEcCCHHHHHHHHHHhcCCCeEeecCCCCCCcceEEEEEE--eCCEEEEEeCCCCCccccccccccccccccccC
Confidence            689999999999999999999999998876542222  2233343  345555443321110                  


Q ss_pred             ---CCcc--cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCC----CceEEEEEECCCCCEEEEEeCCC-----
Q 022871           84 ---VTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG----GTTHIAFVKDPDGYIFELIQRGP-----  149 (291)
Q Consensus        84 ---~~~~--~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~----g~~~~~~~~dp~G~~iel~~~~~-----  149 (291)
                         ...+  ..|+++..|+|.|+|++++++++.++|+....+|....+    |...+.-++.++|..+.|+++..     
T Consensus        79 ~~~a~~~~~~HG~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr~~~~~~~  158 (398)
T PLN02875         79 SDAARRFFAKHGLAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSYKGFDGAK  158 (398)
T ss_pred             cHHHHHHHHHcCCeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEccCCCCCCc
Confidence               0111  267899999999999999999999999998877665432    23445667888888888887421     


Q ss_pred             ----------C--------CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc-----ceeEEEecccCCCceeEE
Q 022871          150 ----------T--------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVL  206 (291)
Q Consensus       150 ----------~--------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l  206 (291)
                                .        ...++|+++.|.+++.+..||+++|||+..+.....+.     +.....+..+  +....+
T Consensus       159 f~p~f~~~~~~~~~~~~~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp--~g~v~i  236 (398)
T PLN02875        159 FLPGYEPVESSSSFPLDYGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASN--NEMVLL  236 (398)
T ss_pred             cCCCcccccccccCCCCCCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcC--CCcEEE
Confidence                      0        12589999999999999999999999998765443221     1233444422  234667


Q ss_pred             EeeeecCc----ce------eccCcceeEEEEEecchhhhHHHHHHHHHHh----CCeeecCC
Q 022871          207 ELTYNYGV----TE------YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL----GGKITRQP  255 (291)
Q Consensus       207 ~l~~~~~~----~~------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~----G~~~~~~p  255 (291)
                      +|..+...    .+      ...|+|++||||.|+||.+++++|    +++    |++++..|
T Consensus       237 pLnEP~~~~~~~SqI~eFL~~~~G~GIQHIAl~tdDI~~av~~L----ra~~~~~Gv~fL~~P  295 (398)
T PLN02875        237 PLNEPTFGTKRKSQIQTYLEHNEGPGLQHLALKSDDIFGTLREM----RARSHIGGFEFMPPP  295 (398)
T ss_pred             EeccCCCCCCCcChHHHHHHhcCCCCeeEEEeecCCHHHHHHHH----HhccccCCeecCCCC
Confidence            77665321    11      235789999999999999999999    998    99999865

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.85  E-value=1.8e-19  Score=137.74  Aligned_cols=138  Identities=64%  Similarity=1.076  Sum_probs=103.8

Q ss_pred             ccCCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCC
Q 022871           13 LLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG   92 (291)
Q Consensus        13 ~~~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   92 (291)
                      .+..++...++++|+.|.|+|++++.+||+++|||++..+...+...+..+++++++......+.+.......+...+.+
T Consensus         7 ~~~~~~~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g   86 (150)
T TIGR00068         7 LVADPKTKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNG   86 (150)
T ss_pred             cccCcccCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCc
Confidence            34456677899999999999999999999999999987765544444455666654433344455543322223334558


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +.|++|.|+|+++++++|.++|+++...+...+.+....+||+||+|++|||++....
T Consensus        87 ~~hi~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~  144 (150)
T TIGR00068        87 FGHIAIGVDDVYKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKST  144 (150)
T ss_pred             eeEEEEecCCHHHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCch
Confidence            8999999999999999999999998877655555555568899999999999987643

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.84  E-value=5.1e-20  Score=140.83  Aligned_cols=137  Identities=45%  Similarity=0.786  Sum_probs=103.7

Q ss_pred             CCCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEE
Q 022871          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       149 ~~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~  228 (291)
                      ....++.|+.|.|.|++++.+||+++|||++......++..+.+.+++.+.......+++..+.+......+.+..|++|
T Consensus        13 ~~~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f   92 (150)
T TIGR00068        13 TKKRRLLHTMLRVGDLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAI   92 (150)
T ss_pred             cCCceEEEEEEEecCHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEE
Confidence            45678999999999999999999999999986554434444455555543332334555544333222233457899999


Q ss_pred             EecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhhhh
Q 022871          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQ  289 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~~~  289 (291)
                      .|+|++++++++    .++|+++..+|...+....+.+||+||+|++|||++.....+.||
T Consensus        93 ~v~dld~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~  149 (150)
T TIGR00068        93 GVDDVYKACERV----RALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKSTKDGLG  149 (150)
T ss_pred             ecCCHHHHHHHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCchhhhcc
Confidence            999999999999    999999888876555544577899999999999999999888887

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.84  E-value=5e-20  Score=146.61  Aligned_cols=132  Identities=33%  Similarity=0.591  Sum_probs=106.7

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCC---------------CceeEEEeeeecCcc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ...+.|+.|.|.|++++++||+++|||++..+...++.++.+++++.++.               .....|||+.+++..
T Consensus        73 ~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~e  152 (233)
T PLN02367         73 GYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGTE  152 (233)
T ss_pred             CcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCCC
Confidence            45689999999999999999999999999888777777888998864321               113589998877644


Q ss_pred             e------eccC----cceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          216 E------YTKG----NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 ~------~~~~----~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                      .      +..+    .|+.|++|.|+|++++++++    ++.|+++...|...++  .+.+|++||||++|||+|.....
T Consensus       153 ~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL----~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~~~  226 (233)
T PLN02367        153 SDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERF----EELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKTIG  226 (233)
T ss_pred             ccccchhcccCCCCCCCceEEEEEcCCHHHHHHHH----HHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccccc
Confidence            1      3333    37999999999999999999    9999999988765443  47899999999999999988766


Q ss_pred             hhh
Q 022871          286 KEI  288 (291)
Q Consensus       286 ~~~  288 (291)
                      +-.
T Consensus       227 ~~~  229 (233)
T PLN02367        227 TTT  229 (233)
T ss_pred             ccc
Confidence            443

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.83  E-value=1.8e-18  Score=137.82  Aligned_cols=194  Identities=21%  Similarity=0.306  Sum_probs=131.7

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ..+.+..+.|.|+|++.+..||+++||+++..+...      ...++.+.. ..+.++-.+. ...+.....|+.|++|.
T Consensus         7 ~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg~-~LL~L~q~~~-a~~~~~~~aGLyH~AfL   78 (265)
T COG2514           7 TPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGGT-PLLTLEQFPD-ARRPPPRAAGLYHTAFL   78 (265)
T ss_pred             CCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCCE-EEEEEEeCCC-CCCCCccccceeeeeee
Confidence            457789999999999999999999999999887653      355666543 3333333222 22233456699999999


Q ss_pred             eCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC--------------------------
Q 022871          100 TED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT--------------------------  150 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~--------------------------  150 (291)
                      +++   +..+..++...|..+... .+..  -...+||.||+||-||+.-.++.                          
T Consensus        79 lP~r~~L~~~l~hl~~~~~~l~Ga-~DH~--vSEAlYl~DPEGNGIEiYaDrp~~~W~~~~~~v~m~t~~ld~~~ll~~~  155 (265)
T COG2514          79 LPTREDLARVLNHLAEEGIPLVGA-SDHL--VSEALYLEDPEGNGIEIYADRPRSTWDWQNDQVKMDTEPLDVEALLEEA  155 (265)
T ss_pred             cCCHHHHHHHHHHHHhcCCccccc-Ccch--hheeeeecCCCCCeEEEEecCChHHhcccCCeeeecccccCHHHHhhhc
Confidence            974   777888999999887522 2222  22358999999999999987531                          


Q ss_pred             ----------CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEe-eeecCccee--
Q 022871          151 ----------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEL-TYNYGVTEY--  217 (291)
Q Consensus       151 ----------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-~~~~~~~~~--  217 (291)
                                ...|.||.|.|.|++++.+||.++|||.+.....      ...|+..+.-  ++.+.. +++......  
T Consensus       156 ~~~~~~g~p~~t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~~~~------~A~F~a~G~Y--HHHia~N~W~s~~~~~~~  227 (265)
T COG2514         156 TKEPWTGLPAGTIIGHVHLKVADLEEAEQFYEDVLGLEVTARGP------SALFLASGDY--HHHLAANTWNSRGARPRN  227 (265)
T ss_pred             cccccccCCCCcEEeEEEEEeCCHHHHHHHHHHhcCCeeeecCC------cceEEecCCc--ceeEEEeccccCCCCCCC
Confidence                      1248999999999999999999999999776511      3344554333  333332 122111111  


Q ss_pred             ccCcceeEEEEEecc
Q 022871          218 TKGNAYAQVAISTDD  232 (291)
Q Consensus       218 ~~~~~~~h~~~~v~d  232 (291)
                      ..-.|+..+.+.+.+
T Consensus       228 ~~~~GLa~~~i~~~~  242 (265)
T COG2514         228 ANASGLAWLEIHTPD  242 (265)
T ss_pred             CCCCCcceEEEEcCC
Confidence            122366677777766

>PRK10291 glyoxalase I; Provisional

Probab=99.83  E-value=3.8e-19  Score=132.54  Aligned_cols=125  Identities=56%  Similarity=0.999  Sum_probs=94.8

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHHHH
Q 022871           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~  107 (291)
                      +|.|+|++++++||+++|||++..+...+...+..+++..++......+++.......++..+.++.|+||.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            47899999999999999999988776555556667777665433334455544333334445668999999999999999


Q ss_pred             HHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Q 022871          108 ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPE  152 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~  152 (291)
                      ++|+++|+++...+...+++....++|+||||++|||++....+.
T Consensus        81 ~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~~~  125 (129)
T PRK10291         81 EKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  125 (129)
T ss_pred             HHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccccc
Confidence            999999999887665555555555788999999999999875443

>PLN02367 lactoylglutathione lyase

Probab=99.83  E-value=5.4e-19  Score=140.70  Aligned_cols=128  Identities=36%  Similarity=0.670  Sum_probs=101.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCC---------------ceeEEEeeccCCC
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ---------------SHFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~   84 (291)
                      .=-.++|++|.|+|++++++||+++|||++..+.+.++.++..++++.++..               ....+++.++.+.
T Consensus        72 ~~~~~~HtmlRVkDle~Sl~FYt~vLGm~ll~r~d~pe~~f~lyFL~~~~~~~~p~d~~~r~~~~~~~~~~LELt~n~g~  151 (233)
T PLN02367         72 KGYIMQQTMYRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFMGYEDTASAPTDPTERTVWTFGQKATIELTHNWGT  151 (233)
T ss_pred             CCcEEEEEEEEeCCHHHHHHHHHHhcCCEEeEEEecCCCcEEEEEeecCCccccccccccceeeccCCCCEEEEecCCCC
Confidence            3567899999999999999999999999999998888888888888653310               1246777765543


Q ss_pred             C------cccCC----CCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           85 T------SYDIG----TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        85 ~------~~~~~----~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .      .+..+    .|+.||||.|+|+++++++|+++|+.+...|....+  ...++++||||++|||++...
T Consensus       152 e~~~~~~~y~~gn~~p~G~~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~--~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        152 ESDPDFKGYHNGNSEPRGFGHIGITVDDVYKACERFEELGVEFVKKPNDGKM--KGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             CccccchhcccCCCCCCCceEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCc--eEEEEEECCCCCEEEEEeccc
Confidence            2      13322    489999999999999999999999999877665443  335889999999999999763

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.81  E-value=3.8e-18  Score=133.30  Aligned_cols=127  Identities=35%  Similarity=0.651  Sum_probs=96.4

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCC---------------ceeEEEeeccCCC
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ---------------SHFVVELTYNYGV   84 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~   84 (291)
                      .=-+++|++|.|+|++++++||+++|||++..+...+...+..++++.++..               ....+++..+...
T Consensus        24 ~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~  103 (185)
T PLN03042         24 KGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGT  103 (185)
T ss_pred             CCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCC
Confidence            3578999999999999999999999999999887766667777887643211               1235666644322


Q ss_pred             Cc------cc----CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           85 TS------YD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 ~~------~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ..      +.    .+.|+.|++|.|+|+++++++|+++|+.+...|.... + ..+++++||+|++|||++..
T Consensus       104 ~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~-~-~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        104 ESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERFEKLGVEFVKKPDDGK-M-KGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cccccccccccCCCCCCCccEEEEEcCCHHHHHHHHHHCCCeEEeCCccCC-c-eeEEEEECCCCCEEEEEECC
Confidence            11      22    2248999999999999999999999999886654332 2 34578899999999999975

>PRK10291 glyoxalase I; Provisional

Probab=99.81  E-value=5.1e-19  Score=131.81  Aligned_cols=122  Identities=50%  Similarity=0.902  Sum_probs=91.2

Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhH
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~  237 (291)
                      .|.|.|++++.+||+++|||++......++..+.+.++..++......+++..+.+...+..+++..|++|.|+|+++++
T Consensus         1 ~l~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~~   80 (129)
T PRK10291          1 MLRVGDLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEAC   80 (129)
T ss_pred             CEEecCHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHHH
Confidence            37899999999999999999987655445555667766544332334566654333222334568899999999999999


Q ss_pred             HHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          238 EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +++    ++.|+++..++...+++..+.+||+||||++|||++.+.
T Consensus        81 ~~l----~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~  122 (129)
T PRK10291         81 EKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  122 (129)
T ss_pred             HHH----HHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEccc
Confidence            999    999999887766555533466889999999999999764

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=99.81  E-value=1.2e-19  Score=146.04  Aligned_cols=231  Identities=21%  Similarity=0.329  Sum_probs=160.6

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC-----CcccCCCCee
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-----TSYDIGTGFG   94 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~   94 (291)
                      .+.+++||.+.|.|...+.+||+..|||++....+.+.+........+.++...+++.-......     .-...|.|+.
T Consensus        14 ~~l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   14 KFLRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             ceeeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            48999999999999999999999999999988654443321122222223334443322211111     1223677899


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEeCCCC----------------------
Q 022871           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGPT----------------------  150 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~~----------------------  150 (291)
                      .+||+|+|++++.+.+.++|+++..+|.+..+  |..+++.+..+.-....+++...-                      
T Consensus        94 dvafeVeD~da~~~~~va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~FLPGF~~v~~~~~fp~l~~  173 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEAVANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGPFLPGFEPVSSDALFPKLPK  173 (381)
T ss_pred             ceEEEecchHHHHHHHHHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhccccccCCCCcccCccccccCCCCc
Confidence            99999999999999999999999988766543  566678888887666677765521                      


Q ss_pred             --CCCceeEEeeeC--CccccHHHHHhhhCCeeeeeeccCCcc-----eeEEEecccCCCceeEEEeeeecCcc------
Q 022871          151 --PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYK-----YTLAMLGYAEEDQTTVLELTYNYGVT------  215 (291)
Q Consensus       151 --~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~l~~~~~~~------  215 (291)
                        ...++|++.+++  .++.+.+||.++|||...+.++...-+     .+.+.+.  +......+.+..+.+..      
T Consensus       174 ~~~~~iDH~vgn~p~~em~sa~~wy~~~l~Fhrfwsvdd~~v~te~SaLrs~vla--n~~esi~mpinEp~~G~k~ksQI  251 (381)
T KOG0638|consen  174 GGLNRIDHVVGNQPDGEMESALRWYEKCLGFHRFWSVDDSQVHTEYSALRSIVLA--NYEESIKMPINEPAPGKKKKSQI  251 (381)
T ss_pred             cceeehhhhhccCCcccchHHHHHHHHhhcccccccCCcchhhhHHHHHHHHHHh--cCCccEEEeccCCCCCCccHHHH
Confidence              135899999999  578899999999999977766533211     1112222  11112233332222111      


Q ss_pred             ----eeccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCc
Q 022871          216 ----EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       216 ----~~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                          .++.|+|++|+++.++||-++++.+    +++|.++..+|.
T Consensus       252 qeyv~y~gG~GvQHiaL~tedIi~Ai~~l----r~rG~eFLs~Ps  292 (381)
T KOG0638|consen  252 QEYVEYHGGAGVQHIALNTEDIIEAIRGL----RARGGEFLSPPS  292 (381)
T ss_pred             HHHHHhcCCCceeeeeecchHHHHHHHHH----HhcCCccccCCH
Confidence                2568899999999999999999999    999999998874

>PRK11478 putative lyase; Provisional

Probab=99.80  E-value=4.4e-18  Score=126.69  Aligned_cols=125  Identities=19%  Similarity=0.239  Sum_probs=84.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeecc---CCCCcccCCCCeeE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN---YGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~   95 (291)
                      +.+++++|++|.|+|++++.+||+++|||++..+...+........+..+. .  ..+++...   ..........|+.|
T Consensus         2 ~~i~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~-~--~~l~l~~~~~~~~~~~~~~~~g~~h   78 (129)
T PRK11478          2 LGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNG-Q--YVIELFSFPFPPERPSRPEACGLRH   78 (129)
T ss_pred             CCcceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceeeEecCC-C--cEEEEEEecCCCCCCCCCCCCceeE
Confidence            468899999999999999999999999999864422211111111222222 2  22333321   11111123357899


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++|.|+|+++++++|+++|+++...+....+|. .++||+||+|+.|||++.
T Consensus        79 i~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~-~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         79 LAFSVDDIDAAVAHLESHNVKCEAIRVDPYTQK-RFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             EEEEeCCHHHHHHHHHHcCCeeeccccCCCCCC-EEEEEECCCCCEEEEEeC
Confidence            999999999999999999999765433333444 458999999999999873

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.80  E-value=1e-18  Score=131.34  Aligned_cols=124  Identities=19%  Similarity=0.226  Sum_probs=93.6

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce------eccCcceeEEE
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQVA  227 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~h~~  227 (291)
                      ++|++|.|.|++++.+||+++|||++.......+  ....++..    ....+.+........      ...+++..|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~~--~~~~~~~~----g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSED--KASYLLRQ----GDINFVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCCc--eEEEEEEc----CCEEEEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            5799999999999999999999999776543221  22333331    134555543222111      11446889999


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhhh
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI  288 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~~  288 (291)
                      |.|+|++++++++    +++|++++.+|...++ +.+.++++||+|++|||++++.+.+..
T Consensus        75 ~~V~Dvda~~~~l----~~~G~~v~~~p~~~~~-~~~~~~i~dp~G~~ie~~~~~~~~~~~  130 (136)
T cd08342          75 FRVDDAAAAYERA----VARGAKPVQEPVEEPG-ELKIAAIKGYGDSLHTLVDRKGYKGPF  130 (136)
T ss_pred             EEeCCHHHHHHHH----HHcCCeEccCceecCC-eEEEEEEeccCCcEEEEEecCCCCCcc
Confidence            9999999999999    9999999999887565 468999999999999999998886654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=5.6e-18  Score=128.33  Aligned_cols=123  Identities=20%  Similarity=0.315  Sum_probs=87.5

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----------CceeeEEEecCCCCceeEEEeecc---CCC-C
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYN---YGV-T   85 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~   85 (291)
                      |++++||+|.|+|++++++||++ |||++..+...++           ......++...++.  ..+++...   ... .
T Consensus         1 ~~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~--~~iel~~~~~~~~~~~   77 (142)
T cd08353           1 VSRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPDGH--SRLELSKFHHPAVIAD   77 (142)
T ss_pred             CceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCCCC--ceEEEEEecCCCCcCc
Confidence            57899999999999999999998 9999865543221           12233444432222  23444321   111 1


Q ss_pred             ---cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           86 ---SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 ---~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                         ....+.|+.|+||.|+|+++++++|+++|+++..++...+++.+ .+|++||+|+.|||++.
T Consensus        78 ~~~~~~~~~g~~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r-~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          78 HRPAPVNALGLRRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYR-LCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCCceEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeE-EEEEECCCCCEEEeeec
Confidence               11235589999999999999999999999998876655554444 58999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.79  E-value=3.5e-18  Score=133.51  Aligned_cols=130  Identities=32%  Similarity=0.582  Sum_probs=99.3

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCC---------------ceeEEEeeeecCc
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGV  214 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~l~~~~~~  214 (291)
                      ...++.|+.|.|.|++++++||+++|||++..+...++.+++++++..+...               ....|+|+.+.+.
T Consensus        24 ~~~~~~Ht~i~V~Dle~Si~FY~~vLG~~~~~r~~~~~~~~~~~fl~~~~~~~~~~~~~~~~~~l~~~~~~lEL~~~~~~  103 (185)
T PLN03042         24 KGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDSETAPTDPPERTVWTFGRKATIELTHNWGT  103 (185)
T ss_pred             CCcEEEEEEEeeCCHHHHHHHHHhhcCCEEEEEEEcCCCceEEEEEecCCcccCCcchhhcccccccCCCEEEEEEcCCC
Confidence            3467999999999999999999999999988776656666777777532210               1347888865432


Q ss_pred             ce------ec----cCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          215 TE------YT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       215 ~~------~~----~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      ..      +.    .+.++.|++|.|+|++++++++    ++.|+++...|....+  .+++|++||||++|||++...+
T Consensus       104 ~~~p~~~~~~~~~~~~~G~~Hlaf~V~Dvd~~~~~L----~~~Gv~v~~~p~~~~~--~~~~fi~DPdG~~IEl~e~~~~  177 (185)
T PLN03042        104 ESDPEFKGYHNGNSDPRGFGHIGITVDDVYKACERF----EKLGVEFVKKPDDGKM--KGLAFIKDPDGYWIEIFDLKRI  177 (185)
T ss_pred             cccccccccccCCCCCCCccEEEEEcCCHHHHHHHH----HHCCCeEEeCCccCCc--eeEEEEECCCCCEEEEEECCCc
Confidence            21      11    1248899999999999999999    9999999877654322  4678899999999999997765


Q ss_pred             h
Q 022871          285 L  285 (291)
Q Consensus       285 ~  285 (291)
                      .
T Consensus       178 ~  178 (185)
T PLN03042        178 G  178 (185)
T ss_pred             h
Confidence            4

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.78  E-value=1.4e-17  Score=122.39  Aligned_cols=120  Identities=53%  Similarity=0.944  Sum_probs=88.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC-CcccCCCCeeEEEEEeCC
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAIATED  102 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~v~d  102 (291)
                      +.|++|.|+|++++.+||+++|||++..+...+++.+..+++..++......+.+...... .+...+.++.|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999987655444455566676543101223444332221 223344578999999999


Q ss_pred             HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      ++++++++.++|+++...+... ++. .+++|+||+|+++||+
T Consensus        81 id~~~~~l~~~G~~~~~~~~~~-~~~-~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERLEEMGVEVTKPPGDG-GMK-GIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHHHCCCEEeeCCccC-CCc-eEEEEECCCCCEEEeC
Confidence            9999999999999998876655 333 4588999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.78  E-value=1.7e-17  Score=121.60  Aligned_cols=115  Identities=45%  Similarity=0.825  Sum_probs=86.7

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----------CceeeEEEecCCCCceeEEEeeccCCCCcccCC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG   90 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (291)
                      .++.|++|.|+|++++++||+++|||++..+...++           +.+..+++.+++......+++..+.+..++..|
T Consensus         1 ~~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g   80 (127)
T cd08358           1 RRALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELG   80 (127)
T ss_pred             CceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCC
Confidence            368999999999999999999999999887765554           334445566544445667888876655555555


Q ss_pred             CCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        91 ~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .+  |++|.|++. ++.++|+++|+.+...+.    +   +++++||||+.|||+.
T Consensus        81 ~~--~~hlav~~~-d~~~~l~~~Gv~~~~~~~----~---~~fi~DPDG~~ie~~~  126 (127)
T cd08358          81 ND--FLGITIHSK-QAVSNAKKHNWPVTEVED----G---VYEVKAPGGYKFYLID  126 (127)
T ss_pred             CC--EEEEEEECH-HHHHHHHHCCCceecCCC----C---EEEEECCCCCEEEEec
Confidence            55  566666666 556999999998876443    2   5889999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.77  E-value=1.1e-17  Score=122.98  Aligned_cols=120  Identities=47%  Similarity=0.812  Sum_probs=90.1

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc-ceeccCcceeEEEEEecc
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~h~~~~v~d  232 (291)
                      +.|+.|.|+|++++.+||+++|||++.......+.....+++..+.......+++....+. .....+++..|++|.|+|
T Consensus         1 ~~hv~i~v~d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~d   80 (121)
T cd07233           1 FLHTMLRVKDLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDD   80 (121)
T ss_pred             CeeEEEEecCcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCC
Confidence            5799999999999999999999999876544444345555665433112455666544332 122334578899999999


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      ++++++++    +++|+++..+|... + +++.+||+||+|++|||+
T Consensus        81 id~~~~~l----~~~G~~~~~~~~~~-~-~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          81 VYAACERL----EEMGVEVTKPPGDG-G-MKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHH----HHCCCEEeeCCccC-C-CceEEEEECCCCCEEEeC
Confidence            99999999    99999999888765 2 358899999999999985

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.5e-17  Score=121.66  Aligned_cols=124  Identities=26%  Similarity=0.317  Sum_probs=84.8

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCC-cccCCCCeeEEEEE
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT-SYDIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~i~~~   99 (291)
                      +.+++|++|.|+|++++.+||+++|||++......++.......+... ....+.+-........ ....+.|++|++|.
T Consensus         1 ~~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~   79 (125)
T cd08352           1 LFGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLN-GGYQLELFSFPNPPERPSYPEACGLRHLAFS   79 (125)
T ss_pred             CCccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecC-CCcEEEEEEcCCCCCCCCCCcCCCceEEEEE
Confidence            368999999999999999999999999987654332221112223321 2222222111111111 11234588999999


Q ss_pred             eCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      |+|+++++++|+++|+++...+....++.. ++|++||+|++|||++
T Consensus        80 v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DP~G~~iEl~~  125 (125)
T cd08352          80 VEDIEAAVKHLKAKGVEVEPIRVDEFTGKR-FTFFYDPDGLPLELYE  125 (125)
T ss_pred             eCCHHHHHHHHHHcCCccccccccCCCceE-EEEEECCCCCEEEecC
Confidence            999999999999999998776544444443 5899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PLN02300 lactoylglutathione lyase

Probab=99.77  E-value=8e-18  Score=142.21  Aligned_cols=133  Identities=47%  Similarity=0.781  Sum_probs=101.0

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      ...++.|++|.|+|++++.+||+++|||++..+...++..+...++..++...+..+++....+......++++.|++|.
T Consensus        21 ~i~~l~Hv~l~V~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~  100 (286)
T PLN02300         21 DKRRMLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIA  100 (286)
T ss_pred             ccceEEEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEE
Confidence            46789999999999999999999999999876544444445555555443333456677544333222345678899999


Q ss_pred             ecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022871          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~  286 (291)
                      |+|++++++++    +++|+++...|...++++.+.+|++||+|+.|||+++....+
T Consensus       101 v~dvd~~~~~l----~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~~~  153 (286)
T PLN02300        101 VEDVAKTVELV----KAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPTPE  153 (286)
T ss_pred             eCCHHHHHHHH----HHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Confidence            99999999999    999999988887766544577899999999999999765433

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=1e-17  Score=126.97  Aligned_cols=122  Identities=18%  Similarity=0.245  Sum_probs=89.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC-----------CcceeEEEecccCCCceeEEEeeeecCcce----
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE----  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  216 (291)
                      .+++|++|.|.|++++.+||++ |||++.......           .....+.++..+.  ....++|.....+..    
T Consensus         2 ~~i~Hi~i~v~Dl~~s~~FY~~-LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~--g~~~iel~~~~~~~~~~~~   78 (142)
T cd08353           2 SRMDNVGIVVRDLEAAIAFFLE-LGLELEGRAEIEGEWADRVTGLDGVRVEIAMLRTPD--GHSRLELSKFHHPAVIADH   78 (142)
T ss_pred             ceeeeEEEEeCCHHHHHHHHHH-cCCEEccccccChHHHHHhcCCCCceEEEEEEeCCC--CCceEEEEEecCCCCcCcC
Confidence            4689999999999999999998 999875443211           1123444444222  255677766432211    


Q ss_pred             ---eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ---~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                         ...+.++.|++|.|+|++++++++    +++|+++..+|...++ +.+.+|++||||+.|||+|.
T Consensus        79 ~~~~~~~~g~~hia~~v~d~d~~~~~l----~~~G~~~~~~~~~~~~-~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          79 RPAPVNALGLRRVMFAVDDIDARVARL----RKHGAELVGEVVQYEN-SYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             CCCCCCCCCceEEEEEeCCHHHHHHHH----HHCCCceeCCceecCC-CeEEEEEECCCCCEEEeeec
Confidence               123457889999999999999999    9999998876655444 45889999999999999984

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.77  E-value=2.5e-17  Score=121.73  Aligned_cols=119  Identities=27%  Similarity=0.419  Sum_probs=84.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc---ccCCCCeeEEEEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS---YDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~g~~~i~~~   99 (291)
                      +++|++|.|+|++++++||+++|||++..+...+..++..+|+.+++ .  ..+++.......+   .....|+.|+||.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD-G--ARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC-C--cEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            57999999999999999999999999865543333334455666542 2  2234432221111   1233478999999


Q ss_pred             eC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+   |+++++++|+++|+++...|...+.|.+. ++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l~~~g~~~~~~~~~~~~g~~~-~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERLRADGYLIIGEPRTTGDGYYE-SVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHHHHCCCEEEeCceecCCCeEE-EEEECCCCCEEEeC
Confidence            95   58999999999999988766555555443 67999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.76  E-value=5.5e-17  Score=121.91  Aligned_cols=120  Identities=18%  Similarity=0.247  Sum_probs=88.9

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC-C---c--ccCCCCeeEEE
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-T---S--YDIGTGFGHFA   97 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~--~~~~~g~~~i~   97 (291)
                      |+|+.|.|+|++++++||+++|||++..+...+  .....++..  +...  +.+...... .   .  ...+.++.|++
T Consensus         1 ~~Hi~i~V~D~e~s~~FY~~vLGf~~~~~~~~~--~~~~~~~~~--g~~~--l~l~~~~~~~~~~~~~~~~~~~g~~hia   74 (136)
T cd08342           1 FDHVEFYVGNAKQLASWFSTKLGFEPVAYHGSE--DKASYLLRQ--GDIN--FVLNSPLNSFAPVADFLEKHGDGVCDVA   74 (136)
T ss_pred             CeEEEEEeCCHHHHHHHHHHhcCCeEEEecCCC--ceEEEEEEc--CCEE--EEEecCCCCCCchHHHHHhcCCceEEEE
Confidence            589999999999999999999999988764432  122333432  2322  333322111 1   0  12456899999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      |.|+|+++.+++|+++|+++..+|...+++.+ .++++||+|++|+|++.+..
T Consensus        75 ~~V~Dvda~~~~l~~~G~~v~~~p~~~~~~~~-~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          75 FRVDDAAAAYERAVARGAKPVQEPVEEPGELK-IAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             EEeCCHHHHHHHHHHcCCeEccCceecCCeEE-EEEEeccCCcEEEEEecCCC
Confidence            99999999999999999999988887565544 58899999999999998754

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.75  E-value=9.8e-17  Score=121.00  Aligned_cols=118  Identities=21%  Similarity=0.373  Sum_probs=86.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ||.+++|+.|.|+|++++.+||+++|||++..+..      ...++..++  .  .+.+...........+.++.|++|.
T Consensus         1 ~i~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~g--~--~l~l~~~~~~~~~~~~~~~~hiaf~   70 (139)
T PRK04101          1 MLKGINHICFSVSNLEKSIEFYEKVLGAKLLVKGR------KTAYFDLNG--L--WIALNEEKDIPRNEIHQSYTHIAFS   70 (139)
T ss_pred             CCCcEEEEEEEecCHHHHHHHHHhccCCEEEeecC------eeEEEecCC--e--EEEeeccCCCCCccCCCCeeEEEEE
Confidence            57899999999999999999999999999876532      134554432  2  2223222211122234468899999


Q ss_pred             eC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++  |+++++++|+++|+++...+...+++.. .++|+||+|++|||.+..
T Consensus        71 v~~~dv~~~~~~l~~~G~~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         71 IEEEDFDHWYQRLKENDVNILPGRERDERDKK-SIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             ecHHHHHHHHHHHHHCCceEcCCccccCCCce-EEEEECCCCCEEEEEeCC
Confidence            97  9999999999999998766555554444 488999999999999875

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.75  E-value=3.2e-17  Score=122.87  Aligned_cols=124  Identities=20%  Similarity=0.173  Sum_probs=88.8

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      +.++.|+.|.|.|++++.+||+++|||++.....  .   ...++.......+..+.+.....     ...++.|++|.|
T Consensus         1 ~~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~--~---~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v   70 (134)
T cd08360           1 PRRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFK--G---RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEV   70 (134)
T ss_pred             CceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEec--C---cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEe
Confidence            4678999999999999999999999999765432  1   12334432222244555543211     135889999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                      +|++++.+ +.++|+++|+++...|.+++..+.+++||+||+|++|||.......
T Consensus        71 ~d~~~~~~-~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~~~  124 (134)
T cd08360          71 GDIDEVML-GGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMDYV  124 (134)
T ss_pred             CCHHHHHH-HHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccccc
Confidence            99777664 2344499999988778777665557799999999999999765544

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.75  E-value=1e-16  Score=123.85  Aligned_cols=126  Identities=30%  Similarity=0.369  Sum_probs=84.9

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEee----ec--------------CCCceeeEEEecCCCCceeEEEeeccC
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR----DV--------------PEEKYSNAFLGFGPEQSHFVVELTYNY   82 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (291)
                      .++++||+|.|+|++++++||+++|||++..+.    ..              ........++..++. .  .+++....
T Consensus         2 ~~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-~--~ieL~~~~   78 (162)
T TIGR03645         2 PRTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGDR-I--GVELFEFK   78 (162)
T ss_pred             CceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCCC-C--cEEEEecc
Confidence            367999999999999999999999999886421    00              011244555654432 1  23343322


Q ss_pred             CC-Cc---c-cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCC-ccc-CC-CceEEEEEECCCCCEEEEEeCCC
Q 022871           83 GV-TS---Y-DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP-GPL-KG-GTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        83 ~~-~~---~-~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~-~~~-~~-g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .. .+   + ..+.|+.|+||.|+|+++++++|+++|+++...+ ... ++ ....++|++||||+.|||++...
T Consensus        79 ~~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        79 NQENPEDNFEYWKTGVFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCCcccccccccceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            11 11   1 1246899999999999999999999998754322 211 11 12346899999999999999864

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.75  E-value=1.4e-16  Score=120.50  Aligned_cols=119  Identities=17%  Similarity=0.209  Sum_probs=84.2

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCc-eeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      .+++|+|++|.|+|++++.+||+++|||++..+...+++. ....|+..+. ..+. +.+...       .+.+++|+||
T Consensus         3 ~~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~-~~h~-~~~~~~-------~~~~~~Hiaf   73 (143)
T cd07243           3 GAHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSN-KPHD-IAFVGG-------PDGKLHHFSF   73 (143)
T ss_pred             CCceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCC-Ccce-EEEecC-------CCCCceEEEE
Confidence            4789999999999999999999999999987664332222 2234554332 2222 222211       1347899999


Q ss_pred             EeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           99 ATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|+|+++   +.++|.++|+++...|....-+...++||+||+|+.|||...
T Consensus        74 ~v~d~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          74 FLESWEDVLKAGDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             EcCCHHHHHHHHHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9999877   568999999998765544332233458999999999999875

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.75  E-value=4.8e-17  Score=124.62  Aligned_cols=119  Identities=26%  Similarity=0.337  Sum_probs=86.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC-CCceeeEEEecCCCCcee---EEEeeccCCCCcccCCCCeeEEEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHF---VVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +|+||+|.|+|++++++||+++|||++..+...+ .+.....++..++.....   .+.+..       ..+.+++|+||
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            5799999999999999999999999987664433 223345666653321100   011110       11458999999


Q ss_pred             EeCCHHHHH---HHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATEDVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|++++.   ++|+++|+++...+.....+...++|++||+|++|||....
T Consensus        74 ~v~die~~~~~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~  126 (153)
T cd07257          74 EVHDFDAQGLGHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDG  126 (153)
T ss_pred             EcCCHHHHHHHHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCc
Confidence            999999886   99999999987666555445555789999999999999765

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.74  E-value=1.2e-17  Score=128.00  Aligned_cols=121  Identities=19%  Similarity=0.227  Sum_probs=85.9

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccC-CcceeEEEecccCCC---ceeEEEeeeecCcceeccCcceeEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEED---QTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~l~~~~~~~~~~~~~~~~h~~~  228 (291)
                      ++.||+|.|+|++++++||+++||+++......+ +......++..+...   ....+.+..       ..++++.|++|
T Consensus         1 ri~Hv~l~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-------~~~~g~~Hiaf   73 (153)
T cd07257           1 RLGHVVLEVPDFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQ-------GPESGVHHAAF   73 (153)
T ss_pred             CccEEEEecCCHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhc-------CCCCceeEEEE
Confidence            4789999999999999999999999986543332 122334444432210   011121211       11468999999


Q ss_pred             EecchhhhH---HHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          229 STDDVYKSA---EVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~di~~~~---~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      .|+|++++.   ++|    ++.|+++...|.++..+...++|++||+|++|||......
T Consensus        74 ~v~die~~~~~~~~L----~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~~  128 (153)
T cd07257          74 EVHDFDAQGLGHDYL----REKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGDL  128 (153)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCcee
Confidence            999988876   555    9999999888887765445678999999999999976543

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.74  E-value=5.9e-17  Score=122.64  Aligned_cols=121  Identities=13%  Similarity=0.151  Sum_probs=84.2

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcce-eEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY-TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      +.++.|++|.|+|++++.+||+++|||++..+...+++.. ...++.....  .+.+.+..  .     .++++.|++|.
T Consensus         4 ~~~l~Hv~l~v~Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~--~h~~~~~~--~-----~~~~~~Hiaf~   74 (143)
T cd07243           4 AHRLDHCLLTGEDIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNK--PHDIAFVG--G-----PDGKLHHFSFF   74 (143)
T ss_pred             CceeCEEEEecCCHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCC--cceEEEec--C-----CCCCceEEEEE
Confidence            4578999999999999999999999999766543222211 2233332222  23333321  1     13578999999


Q ss_pred             ecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |+|++++.+. .++|+++|+++...|.++..++++.+||+||+||+|||.+.
T Consensus        75 v~d~~~l~~~-~~~l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          75 LESWEDVLKA-GDIISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             cCCHHHHHHH-HHHHHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            9997765333 34459999998878776553345889999999999999764

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=1e-16  Score=117.47  Aligned_cols=114  Identities=32%  Similarity=0.580  Sum_probs=83.0

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-----------cceeEEEecccCCCceeEEEeeeecCcceeccCc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN  221 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      ++.|++|.|+|+++|++||+++|||++..+...++           +.+...++...++..+..++|+.+.+..+++.|.
T Consensus         2 ~~~Hv~irV~DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           2 RALHFVFKVGNRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             ceEEEEEEeCCHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            57899999999999999999999999876554443           3334344543223345688998877655555555


Q ss_pred             ceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       222 ~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +  |++|.|++. ++.+++    ++.|+++...|.       .++++.||||+.|||+.
T Consensus        82 ~--~~hlav~~~-d~~~~l----~~~Gv~~~~~~~-------~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D--FLGITIHSK-QAVSNA----KKHNWPVTEVED-------GVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C--EEEEEEECH-HHHHHH----HHCCCceecCCC-------CEEEEECCCCCEEEEec
Confidence            5  566666664 455777    999998876554       27899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.73  E-value=7.1e-17  Score=124.81  Aligned_cols=125  Identities=20%  Similarity=0.211  Sum_probs=86.4

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeee----cc--------------CCcceeEEEecccCCCceeEEEeeeecC
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV----DK--------------PEYKYTLAMLGYAEEDQTTVLELTYNYG  213 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~  213 (291)
                      ..++||+|.|+|++++.+||+++|||++..+.    ..              ....+.+.++..++   +..++|.....
T Consensus         3 ~~i~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---~~~ieL~~~~~   79 (162)
T TIGR03645         3 RTFSHIGISVPDLDAAVKFYTEVLGWYLIMPPTEIVEDDSAIGEMCTDVFGEGWGSFKIAHLSTGD---RIGVELFEFKN   79 (162)
T ss_pred             ceEEEEEEEeCCHHHHHHHHHHhcCCEEEeccccccCCCCCCCchhhHHhCCCcceeeEEEEecCC---CCcEEEEeccC
Confidence            46899999999999999999999999864211    00              01124445555322   34577766543


Q ss_pred             ccee-----ccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCccc--CC-CCceEEEEECCCCCeEEEEechh
Q 022871          214 VTEY-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--PG-LNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       214 ~~~~-----~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~--~~-~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ....     ..+.+..|++|.|+|++++++++    +++|+++...+...  ++ ...+.+|++||||+.|||+++..
T Consensus        80 ~~~~~~~~~~~~~g~~Hla~~v~dida~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  153 (162)
T TIGR03645        80 QENPEDNFEYWKTGVFHFCVQDPDVEGLAERI----VAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSY  153 (162)
T ss_pred             CCCCCcccccccccceEEEEEcCCHHHHHHHH----HHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcCh
Confidence            2211     12358899999999999999999    99998764433211  11 11278999999999999999765

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.73  E-value=2.4e-16  Score=116.17  Aligned_cols=116  Identities=26%  Similarity=0.297  Sum_probs=82.4

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++++|+.|.|+|++++.+||+++|||++..+..  ++   .+++..........+.+..       ....++.|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~---~~~~~~~~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG---RVYLKAWDEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc---eEEEEccCCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            6899999999999999999999999999876532  11   2344432111122233321       1234788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .   |+++++++|+++|+++...|.....+....++|+||+||+||+....
T Consensus        70 ~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          70 LDDADLEKLEARLQAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            7   78999999999999987654333323223589999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.73  E-value=2.9e-16  Score=117.66  Aligned_cols=117  Identities=23%  Similarity=0.290  Sum_probs=84.7

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++++|++|.|+|++++.+||+++|||++..+...     ...++..+....+..+.+.....     ...|++|++|.|+
T Consensus         2 ~~l~hi~l~v~dl~~s~~FY~~vlGl~~~~~~~~-----~~~~~~~~~~~~~~~i~l~~~~~-----~~~g~~hiaf~v~   71 (134)
T cd08360           2 RRLGHVVLFVPDVEAAEAFYRDRLGFRVSDRFKG-----RGAFLRAAGGGDHHNLFLIKTPA-----PMAGFHHAAFEVG   71 (134)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHHhcCCEEEEEecC-----cEEEEECCCCCCCcEEEEecCCC-----CCCcceEEEEEeC
Confidence            6899999999999999999999999998765421     23455543222223343432211     1358999999999


Q ss_pred             CHHHHH---HHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          102 DVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |++++.   ++|.++|+++...+...+.+...++||+||+|+.|||....
T Consensus        72 d~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~  121 (134)
T cd08360          72 DIDEVMLGGNHMLRAGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADM  121 (134)
T ss_pred             CHHHHHHHHHHHHHcCCccccCCCCcCCCccEEEEEECCCCCEEEEEccc
Confidence            888766   59999999987655444444445589999999999999754

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>PRK11478 putative lyase; Provisional

Probab=99.73  E-value=8.3e-17  Score=119.79  Aligned_cols=120  Identities=22%  Similarity=0.225  Sum_probs=82.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-cceeEEEecccCCCceeEEEeeeecCcce---eccCcceeEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~h~~  227 (291)
                      .++.|++|.|+|++++.+||+++|||++.......+ ..+... +...   ....+++.....+..   .+...+..|++
T Consensus         5 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~-~~~~---~~~~l~l~~~~~~~~~~~~~~~~g~~hi~   80 (129)
T PRK11478          5 KQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSWKGD-LALN---GQYVIELFSFPFPPERPSRPEACGLRHLA   80 (129)
T ss_pred             ceecEEEEEcCCHHHHHHHHHHHhCCEecccccccccccceee-EecC---CCcEEEEEEecCCCCCCCCCCCCceeEEE
Confidence            468999999999999999999999999754321111 111111 1111   134566654221111   12234678999


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      |.|+|++++++++    +++|+++...+.. +..+.+++||+||+|+.|||+|
T Consensus        81 f~v~d~~~~~~~l----~~~G~~~~~~~~~-~~~g~~~~~~~DPdG~~iEl~~  128 (129)
T PRK11478         81 FSVDDIDAAVAHL----ESHNVKCEAIRVD-PYTQKRFTFFNDPDGLPLELYE  128 (129)
T ss_pred             EEeCCHHHHHHHH----HHcCCeeeccccC-CCCCCEEEEEECCCCCEEEEEe
Confidence            9999999999999    9999997643322 3234588999999999999987

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.72  E-value=1.1e-16  Score=118.20  Aligned_cols=119  Identities=19%  Similarity=0.268  Sum_probs=81.6

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce---eccCcceeEEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~h~~~~  229 (291)
                      ++.|++|.|.|++++.+||+++|||++......+..++...++..++   +..+++........   ....++..|++|.
T Consensus         1 ~~~Hi~l~v~dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~   77 (125)
T cd07241           1 KIEHVAIWTKDLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDD---GARLELMTRPDIAPSPNEGERTGWAHLAFS   77 (125)
T ss_pred             CceEEEEEecCHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCC---CcEEEEEcCcccCCCcccCCCCceEEEEEE
Confidence            47899999999999999999999999754432222233444444322   34566654221111   1123478999999


Q ss_pred             ecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      |+|   ++++++++    +++|+++..+|...+. +.+.++++|||||.|||.
T Consensus        78 v~~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-g~~~~~~~DPdG~~iE~~  125 (125)
T cd07241          78 VGSKEAVDELTERL----RADGYLIIGEPRTTGD-GYYESVILDPEGNRIEIT  125 (125)
T ss_pred             CCCHHHHHHHHHHH----HHCCCEEEeCceecCC-CeEEEEEECCCCCEEEeC
Confidence            965   66666666    9999999877754443 235678999999999983

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.72  E-value=7.7e-17  Score=119.70  Aligned_cols=119  Identities=30%  Similarity=0.517  Sum_probs=84.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC-C---Ccc--cCCCCeeEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-V---TSY--DIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~--~~~~g~~~i   96 (291)
                      +++|+.|.|+|++++.+||+++|||++......++.....+++..++.    .+++..... .   ..+  ..+.|+.|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNT----KVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCE----EEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            579999999999999999999999998765433333445555655432    233332111 1   111  124578899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEecC-CcccCCCceEEEEE--ECCCCCEEEEEe
Q 022871           97 AIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dp~G~~iel~~  146 (291)
                      ||.|+|+++++++|+++|+++..+ |...++|.. ..++  +||||+.||+++
T Consensus        77 ~~~v~di~~~~~~l~~~G~~~~~~~~~~~~~g~~-~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETLKEKGVRLIDEEPRIGAGGKP-VAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHHHHCCCcccCCCCccCCCCCE-EEEecccccCcEEEEecC
Confidence            999999999999999999998764 555555544 3556  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.72  E-value=1.7e-16  Score=119.64  Aligned_cols=116  Identities=12%  Similarity=0.188  Sum_probs=83.0

Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchh
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~  234 (291)
                      .||.|.|+|++++.+||+++|||++..+...     ...++.......++.+.+..       ....++.|++|.|+|++
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4899999999999999999999997765321     23344432222233333321       12458999999998854


Q ss_pred             hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          235 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      + +.++.++|+++|+++...|..++..+.+++|++||+|+.|||+....
T Consensus        69 ~-v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  116 (141)
T cd07258          69 D-IGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGME  116 (141)
T ss_pred             H-HHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcc
Confidence            3 33344555999999988888876555688999999999999987554

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.71  E-value=2.3e-16  Score=116.41  Aligned_cols=121  Identities=23%  Similarity=0.264  Sum_probs=83.8

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc--c-eeccCcceeEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--T-EYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-~~~~~~~~~h~~~  228 (291)
                      .++.|++|.|.|++++.+||+++|||+........+.....+.+....   ...+++......  . ..+.+.+..|++|
T Consensus         2 ~~~~hi~l~v~d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~~~~~~~~~~~~g~~h~~~   78 (125)
T cd08352           2 FGIHHVAIICSDYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNG---GYQLELFSFPNPPERPSYPEACGLRHLAF   78 (125)
T ss_pred             CccceEEEEcCCHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCC---CcEEEEEEcCCCCCCCCCCcCCCceEEEE
Confidence            468999999999999999999999999765432222111112222111   234444332211  1 1123457889999


Q ss_pred             EecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      .|+|++++.+++    +++|+++...+....+ +.+.+|++||+|++|||.|
T Consensus        79 ~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          79 SVEDIEAAVKHL----KAKGVEVEPIRVDEFT-GKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             EeCCHHHHHHHH----HHcCCccccccccCCC-ceEEEEEECCCCCEEEecC
Confidence            999999999999    9999998776544333 4578999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.71  E-value=8.1e-16  Score=119.37  Aligned_cols=124  Identities=22%  Similarity=0.291  Sum_probs=87.2

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +.|.+|+|++|.|+|++++.+||+++|||++..+.....+.....++...+...  .+.+.....    ....++.|+||
T Consensus         2 ~~i~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~--~i~l~~~~~----~~~~~~~hiaf   75 (166)
T cd09014           2 VGVRRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVH--DVAYTRDPA----GARGRLHHLAY   75 (166)
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCce--eEEEecCCC----CCCCCceEEEE
Confidence            568999999999999999999999999999876643332222344555432222  222222111    12236899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++|++||+|++|||....
T Consensus        76 ~v~~~~~l~~~~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  128 (166)
T cd09014          76 ALDTREDVLRAADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGGG  128 (166)
T ss_pred             ECCCHHHHHHHHHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEcC
Confidence            9985   5578899999999987666554433434588999999999999873

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.71  E-value=2.5e-16  Score=121.74  Aligned_cols=122  Identities=21%  Similarity=0.229  Sum_probs=80.2

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      |+++.|++|.|+|++++.+||+++|||++.......++.....++....  ....+.+..       ..++++.|++|.|
T Consensus         1 ~~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~--~~~~i~l~~-------~~~~~~~Hiaf~v   71 (161)
T cd07256           1 PQRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKG--GVHDTALTG-------GNGPRLHHVAFWV   71 (161)
T ss_pred             CceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCC--CcceEEEec-------CCCCceeEEEEEc
Confidence            5679999999999999999999999999765433222222333343222  123343322       1245789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCe--eecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 DDVYKSAEVVNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +|.++ +..+.++|+++|+.  +...|..+...+.+++|++||+||.|||++..
T Consensus        72 ~~~~~-v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          72 PEPHN-IIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CCHHH-HHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            87333 23333444999986  33445544433457899999999999998644

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.71  E-value=3.1e-16  Score=114.07  Aligned_cols=114  Identities=25%  Similarity=0.261  Sum_probs=83.4

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      +.|+.|.|+|++++++||+++||+++..... .+..+.  ++..++   ...+.+....+..  ...+...|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~~~~--~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGGDYA--VFSTGG---GAVGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCCceE--EEEeCC---ccEEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999765432 122233  333222   1223333222211  1234678999999999


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +++.+++    +++|+++..+|...++ +++.+|++||+|+.|+|+|
T Consensus        73 ~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARV----EAAGGKVLVPPTDIPG-VGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHH----HHCCCEEEeCCcccCC-cEEEEEEECCCCCEEEeEC
Confidence            9999999    9999999989887775 3589999999999999985

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.71  E-value=1.2e-16  Score=118.33  Aligned_cols=120  Identities=28%  Similarity=0.437  Sum_probs=82.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeec--CCCceeeEEEecCCCCceeEEEeeccCCCCcccC---CCCeeEEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV--PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI---GTGFGHFA   97 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~i~   97 (291)
                      ||+||+|.|+|++++.+||+++|||++......  ........++..+..  .+.+.............   ..+..|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEG--HIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSS--CEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeeccccc--ceeeeeeccccccccccccccccceeEE
Confidence            689999999999999999999999999988662  222333444444333  33333322221111111   01344555


Q ss_pred             EEe---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEE
Q 022871           98 IAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        98 ~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      +.+   +|+++++++|++.|+++...+.....+...++|++||+|+.|||
T Consensus        79 ~~~~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            555   57888999999999999888777776666656899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.70  E-value=2.6e-16  Score=116.00  Aligned_cols=117  Identities=21%  Similarity=0.216  Sum_probs=80.6

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.....  +.  ..++... .......+.+..       ...++..|++|.|
T Consensus         2 ~~~l~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~~--~~~~~~~-~~~~~~~~~l~~-------~~~~~~~hiaf~v   69 (122)
T cd07265           2 VLRPGHVQLRVLDLEEAIKHYREVLGLDEVGRDD--QG--RVYLKAW-DEFDHHSIVLRE-------ADTAGLDFMGFKV   69 (122)
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhccCCEeeeecC--Cc--eEEEEcc-CCCcccEEEecc-------CCCCCeeEEEEEe
Confidence            3578999999999999999999999999765421  11  2222221 111233444421       1234678999999


Q ss_pred             c---chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          231 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +   |++++.+++    +++|+++...|.......++.+||+||+||+|||.+..+
T Consensus        70 ~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~~  121 (122)
T cd07265          70 LDDADLEKLEARL----QAYGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADKE  121 (122)
T ss_pred             CCHHHHHHHHHHH----HHCCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEecc
Confidence            7   566666666    999999877664433323578999999999999987643

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.70  E-value=3.5e-16  Score=119.94  Aligned_cols=122  Identities=16%  Similarity=0.173  Sum_probs=87.2

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC---CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      .++++.|+.|.|+|++++.+||+++|||++.......   +....+.++..+.  .+..+.+...      ..++++.|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNG--RHHSLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCC--CCCCEEEEcC------CCCceeEEE
Confidence            4678999999999999999999999999976542221   1123444454322  1333444321      123578999


Q ss_pred             EEEecchhh---hHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          227 AISTDDVYK---SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v~di~~---~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +|.|+|+++   +.++|    +++|+++..+|..++..+.+.+|++||+|++|||.....
T Consensus        78 af~V~d~~~l~~~~~~L----~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          78 MLEVTSLDDVGRAYDRV----RARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            999988554   45555    999999988887776555688999999999999987544

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.69  E-value=3.4e-16  Score=116.24  Aligned_cols=119  Identities=23%  Similarity=0.337  Sum_probs=84.1

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce------eccCcceeEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~h~  226 (291)
                      ++.|+.|.|+|++++.+||+++|||+........+......++..+    ...++|....+...      ...+.+..|+
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i   76 (128)
T TIGR03081         1 RIDHVGIAVPDLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALG----NTKVELLEPLGEDSPIAKFLEKNGGGIHHI   76 (128)
T ss_pred             CCCEEEEEeCCHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecC----CEEEEEEecCCCCChHHHHHhcCCCceEEE
Confidence            4789999999999999999999999976543222223344555432    24566654322111      0124577899


Q ss_pred             EEEecchhhhHHHHHHHHHHhCCeeecC-CcccCCCCceEEEE--ECCCCCeEEEEe
Q 022871          227 AISTDDVYKSAEVVNLVTQELGGKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~Dp~G~~iel~~  280 (291)
                      +|.|+|++++.+++    +++|++++.+ |...++ +.+..|+  +||||+.||+.|
T Consensus        77 ~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        77 AIEVDDIEAALETL----KEKGVRLIDEEPRIGAG-GKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             EEEcCCHHHHHHHH----HHCCCcccCCCCccCCC-CCEEEEecccccCcEEEEecC
Confidence            99999999999999    9999998764 544444 3355666  799999999975

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.69  E-value=1.5e-15  Score=116.43  Aligned_cols=122  Identities=19%  Similarity=0.310  Sum_probs=87.0

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC---CCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .-++|+||+|.|+|++++.+||+++|||++..+....   +......++..+....  .+.+...      ..+.+++|+
T Consensus         6 ~~~~l~Hi~l~v~Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~i~~~~~------~~~~g~~Hi   77 (154)
T cd07237           6 GDQGLGHVVLATPDPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHH--SLALAEG------PGPKRIHHL   77 (154)
T ss_pred             CCCccCEEEEEeCCHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCC--CEEEEcC------CCCceeEEE
Confidence            4678999999999999999999999999987653321   1123455555432211  2222211      123579999


Q ss_pred             EEEeCCHH---HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           97 AIATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +|.|+|++   +++++|+++|+++...+...+.+....+|++||+|+.|||.....
T Consensus        78 af~V~d~~~l~~~~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          78 MLEVTSLDDVGRAYDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            99998755   689999999999887665555444456999999999999987653

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1e-15  Score=112.97  Aligned_cols=118  Identities=30%  Similarity=0.508  Sum_probs=83.7

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC---CCcccCCCCeeEEE
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~i~   97 (291)
                      |++++|+.|.|+|++++++||+++|||+.....+..  .  ...+..++  .  .+.+.....   ......+.+..|++
T Consensus         1 ~~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~~--~--~~~~~~~~--~--~~~l~~~~~~~~~~~~~~~~~~~hi~   72 (125)
T cd07253           1 IKRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEEV--G--RKALRFGS--Q--KINLHPVGGEFEPAAGSPGPGSDDLC   72 (125)
T ss_pred             CcccceEEEEecCHHHHHHHHHHHhCceeecccccC--C--ceEEEeCC--E--EEEEecCCCccCcCccCCCCCCceEE
Confidence            578999999999999999999999999987654321  1  23344333  2  233332111   11222456889999


Q ss_pred             EEeCC-HHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEe
Q 022871           98 IATED-VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~  146 (291)
                      |.+++ +++++++|.++|+++...+....+  +....++|+||+|+++|+.+
T Consensus        73 ~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          73 LITEPPIDELVAHLEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EEecccHHHHHHHHHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99975 999999999999998766654322  22345899999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=1e-15  Score=112.48  Aligned_cols=116  Identities=16%  Similarity=0.226  Sum_probs=80.2

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeec--cCCCCcccCCCCeeEEEEE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY--NYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~~~i~~~   99 (291)
                      +++.|+.|.|+|++++.+||+++|||++....+  .    ...+. +  ...+......  .....+...+.+..|++|.
T Consensus         1 ~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~   71 (120)
T cd09011           1 MKFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG--E----NVTFE-G--GFALQEGYSWLEGISKADIIEKSNNFELYFE   71 (120)
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCEEeeccC--c----eEEEe-c--cceeccchhhhccCCcccccccCCceEEEEE
Confidence            378999999999999999999999999864321  1    11111 1  1111100000  0001111123355799999


Q ss_pred             eCCHHHHHHHHHHcCC-eEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          100 TEDVYKLVENIRAKGG-NVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~-~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+|+++++++|+++|+ .+..+|...++|.+. ++|+|||||+|||.+.
T Consensus        72 v~dvd~~~~~l~~~g~~~~~~~~~~~~~g~r~-~~~~DPdGn~iei~~~  119 (120)
T cd09011          72 EEDFDAFLDKLKRYDNIEYVHPIKEHPWGQRV-VRFYDPDKHIIEVGES  119 (120)
T ss_pred             ehhhHHHHHHHHhcCCcEEecCcccCCCccEE-EEEECCCCCEEEEecc
Confidence            9999999999999986 677788888877654 8999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.69  E-value=1.6e-15  Score=111.65  Aligned_cols=115  Identities=19%  Similarity=0.257  Sum_probs=81.9

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +.+++|+|+.|.|+|++++.+||+++|||++..+.+      ..+++...+......+.+...       ...++.|++|
T Consensus         2 ~~i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~------~~~~l~~~~~~~~~~~~l~~~-------~~~~~~h~af   68 (121)
T cd09013           2 FDIAHLAHVELLTPKPEESLWFFTDVLGLEETGREG------QSVYLRAWGDYEHHSLKLTES-------PEAGLGHIAW   68 (121)
T ss_pred             CCccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC------CeEEEEeccCCCccEEEEeeC-------CCCceEEEEE
Confidence            568999999999999999999999999999876632      134554322212222333211       2347899999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+   ++++++++++++|+++...+..... .. .++|+||+|+.+|+....
T Consensus        69 ~v~~~~~v~~~~~~l~~~G~~~~~~~~~~~~-~~-~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          69 RASSPEALERRVAALEASGLGIGWIEGDPGH-GK-AYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             EcCCHHHHHHHHHHHHHcCCccccccCCCCC-cc-eEEEECCCCCEEEEEEec
Confidence            997   5889999999999987433222222 22 488999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.68  E-value=1.2e-15  Score=112.76  Aligned_cols=113  Identities=14%  Similarity=0.204  Sum_probs=82.5

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ++.+|.|++|.|+|++++.+||+++|||++..+..      ...++..++.. + .+.+....        ++..|++|+
T Consensus         3 ~~~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~-~-~i~l~~~~--------~~~~~iaf~   66 (124)
T cd08361           3 ELQDIAYVRLGTRDLAGATRFATDILGLQVAERTA------KATYFRSDARD-H-TLVYIEGD--------PAEQASGFE   66 (124)
T ss_pred             eEEEeeEEEEeeCCHHHHHHHHHhccCceeccCCC------CeEEEEcCCcc-E-EEEEEeCC--------CceEEEEEE
Confidence            58899999999999999999999999999865432      14556654322 2 23232211        356789999


Q ss_pred             eCC---HHHHHHHHHHcCCeEecCCcccC--CCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TED---VYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+|   +++++++|+++|+++...+....  .+...+++|+|||||.||+....
T Consensus        67 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~  120 (124)
T cd08361          67 LRDDDALESAATELEQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRP  120 (124)
T ss_pred             ECCHHHHHHHHHHHHHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEee
Confidence            975   99999999999998766543211  22334588999999999998764

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.68  E-value=2.7e-15  Score=111.92  Aligned_cols=120  Identities=20%  Similarity=0.251  Sum_probs=81.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCc-eeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK-YSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ||.+++|+.|.|+|++++.+||+++||+++..+....... ....++..++    ..+.+......    ...+++|++|
T Consensus         1 mi~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~i~l~~~~~~----~~~~~~Hiaf   72 (131)
T cd08364           1 MIEGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGG----LWIAIMEGDSL----QERTYNHIAF   72 (131)
T ss_pred             CcccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCC----eEEEEecCCCC----CCCCceEEEE
Confidence            5789999999999999999999999999886653221100 0011222221    12333322111    1236899999


Q ss_pred             EeC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+  |+++++++|+++|+++... .....+....+||+||+||.+||....
T Consensus        73 ~v~~~~ld~~~~~l~~~gv~~~~~-~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          73 KISDSDVDEYTERIKALGVEMKPP-RPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             EcCHHHHHHHHHHHHHCCCEEecC-CccccCCceEEEEECCCCCEEEEecCC
Confidence            997  7999999999999987643 233333334699999999999998653

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.68  E-value=1.7e-15  Score=110.18  Aligned_cols=114  Identities=24%  Similarity=0.243  Sum_probs=81.9

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCH
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~  103 (291)
                      +.|++|.|+|++++.+||+++|||++..... +.+  ..+++..++. .  ...+.......  ....+..|++|.|+|+
T Consensus         1 ~~hi~l~v~d~~~s~~FY~~~lG~~~~~~~~-~~~--~~~~~~~~~~-~--~~~~~~~~~~~--~~~~~~~~~~f~v~di   72 (114)
T cd07247           1 PVWFELPTTDPERAKAFYGAVFGWTFEDMGD-GGG--DYAVFSTGGG-A--VGGLMKAPEPA--AGSPPGWLVYFAVDDV   72 (114)
T ss_pred             CEEEEeeCCCHHHHHHHHHhccCceeeeccC-CCC--ceEEEEeCCc-c--EEEEecCCCCC--CCCCCeEEEEEEeCCH
Confidence            4799999999999999999999999865542 112  2334444321 1  12222111111  1233567999999999


Q ss_pred             HHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++++++|+++|+++..+|...+++.. .++++||+|+.++|++
T Consensus        73 ~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DPdG~~~~l~~  114 (114)
T cd07247          73 DAAAARVEAAGGKVLVPPTDIPGVGR-FAVFADPEGAVFGLWQ  114 (114)
T ss_pred             HHHHHHHHHCCCEEEeCCcccCCcEE-EEEEECCCCCEEEeEC
Confidence            99999999999998888777765444 5999999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=3.8e-15  Score=115.07  Aligned_cols=118  Identities=21%  Similarity=0.306  Sum_probs=79.9

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++|+||+|.|+|++++++||+++|||++......+.+.....++..++..  ..+.+..       ..++++.|++|.|+
T Consensus         2 ~~l~Hv~l~V~Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~--~~i~l~~-------~~~~~~~Hiaf~v~   72 (161)
T cd07256           2 QRLDHFNLRVPDVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGV--HDTALTG-------GNGPRLHHVAFWVP   72 (161)
T ss_pred             ceEEEEEEecCCHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCc--ceEEEec-------CCCCceeEEEEEcC
Confidence            58999999999999999999999999987554332232233444332211  1222221       12347899999997


Q ss_pred             C---HHHHHHHHHHcCCeE--ecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          102 D---VYKLVENIRAKGGNV--TREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+..  ...|.....+...++||+||+|+.||+....
T Consensus        73 ~~~~v~~~~~~L~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          73 EPHNIIRTCDLLAAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             CHHHHHHHHHHHHHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            5   777889999999863  2233222222334589999999999998654

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.68  E-value=2e-15  Score=111.02  Aligned_cols=116  Identities=25%  Similarity=0.300  Sum_probs=81.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      +++++.|+.|.|+|++++.+||+++|||++....+      ..+++..........+.+...       ...+..|++|.
T Consensus         1 ~~~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-------~~~~~~hi~~~   67 (121)
T cd07266           1 NILRLGHVELRVTDLEKSREFYVDVLGLVETEEDD------DRIYLRGLEEFIHHSLVLTKA-------PVAGLGHIAFR   67 (121)
T ss_pred             CcceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC------CeEEEEecCCCceEEEEEeeC-------CCCceeEEEEE
Confidence            47899999999999999999999999999875532      123443211112222323221       12478899999


Q ss_pred             e---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 T---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |   +|+++++++++++|+++...|.....+....+++.||+|++||+....
T Consensus        68 v~~~~dv~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          68 VRSEEDLDKAEAFFQELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCCHHHHHHHHHHHHHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            9   478999999999999987653333333334589999999999998653

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=4.9e-15  Score=109.12  Aligned_cols=118  Identities=22%  Similarity=0.269  Sum_probs=84.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCC--cccCCCCeeEEEEEeCCH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~i~~~v~d~  103 (291)
                      +..|.|+|++++++||+++|||++......+++......+..++  ..+.+.........  ....+.+..+++|.|+|+
T Consensus         2 ~p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d~   79 (122)
T cd08355           2 WPTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGD--GGVMVGSVRDDYRASSARAGGAGTQGVYVVVDDV   79 (122)
T ss_pred             eEEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECC--EEEEEecCCCcccccccccCCCceEEEEEEECCH
Confidence            35689999999999999999999987654334433344455542  22333221111110  011334567899999999


Q ss_pred             HHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +++++++.++|+++..++...++|.. .++++||+|++|+|.+
T Consensus        80 d~~~~~l~~~G~~v~~~~~~~~~g~~-~~~~~DPdG~~~~l~~  121 (122)
T cd08355          80 DAHYERARAAGAEILREPTDTPYGSR-EFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHCCCEEeeCccccCCCcE-EEEEECCCCCEEEEec
Confidence            99999999999999988888887765 4889999999999964

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=2.6e-15  Score=109.69  Aligned_cols=117  Identities=24%  Similarity=0.336  Sum_probs=82.4

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCC--cccCCCCeeEEEEEeCCH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~i~~~v~d~  103 (291)
                      ||.|.|+|++++.+||+++|||++..+....++ ...+.+..... ....+.+.......  ....+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGGG-FRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCCC-cEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            899999999999999999999999877542222 22333332221 13334443322221  112344788999999999


Q ss_pred             HHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++++++|+++|+++...+...+++  ..++++||+|++|+|++
T Consensus        79 ~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEELKARGVEFSEEPREMPYG--TVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHHHhCCCEEeeccccCCCc--eEEEEECCCCCEEEEeC
Confidence            999999999999998776444433  35899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.67  E-value=3.6e-15  Score=110.42  Aligned_cols=113  Identities=19%  Similarity=0.234  Sum_probs=77.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhc---CCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~L---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ++.+++||+|.|+|++++.+||+++|   |++.......          .  .+...+.+  .....  ......|..|+
T Consensus         4 ~~~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~----------~--~g~~~l~l--~~~~~--~~~~~~g~~h~   67 (128)
T PRK06724          4 LRAGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAY----------S--TGESEIYF--KEVDE--EIVRTLGPRHI   67 (128)
T ss_pred             cCcccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEee----------e--CCCeeEEE--ecCCc--cccCCCCceeE
Confidence            67899999999999999999999966   6665321111          1  11111111  11000  01123477899


Q ss_pred             EEEe---CCHHHHHHHHHHcCCeEecCCcccC--CCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIAT---EDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ||.|   +|+++++++|.++|+++...|...+  .++...++|+||||+.||+...+
T Consensus        68 af~v~~~~dvd~~~~~l~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~~  124 (128)
T PRK06724         68 CYQAINRKVVDEVAEFLSSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYTP  124 (128)
T ss_pred             EEecCChHHHHHHHHHHHHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeCC
Confidence            9998   7899999999999999877765543  22334588999999999998774

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.67  E-value=4.4e-15  Score=110.81  Aligned_cols=116  Identities=27%  Similarity=0.386  Sum_probs=85.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHH
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~  104 (291)
                      +||.|.|+|++++.+||+++||+++......+ +.....++..++.  ...+.+....      ...++.|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~--~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDED--HHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCCC--cceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            59999999999999999999999987664432 3234556665432  2233333221      1458899999999874


Q ss_pred             ---HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          105 ---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       105 ---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                         +++++|+++|+++...+...+.+...+++|+||+|++|||.+...
T Consensus        72 ~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~  119 (131)
T cd08343          72 DILRAADRLAANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMY  119 (131)
T ss_pred             HHHHHHHHHHHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCc
Confidence               688999999999887665555444455889999999999997754

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.67  E-value=1.9e-15  Score=112.73  Aligned_cols=114  Identities=22%  Similarity=0.366  Sum_probs=80.3

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC--
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE--  101 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~--  101 (291)
                      |+||.|.|+|++++.+||+++|||++......      ..++..++  .  .+.+.............++.|++|.++  
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~~~------~~~~~~~~--~--~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLGEK------TAYFTIGG--T--WLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccCCc------cceEeeCc--e--EEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            68999999999999999999999998654221      23444432  2  233322221111122347899999997  


Q ss_pred             CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+++++++|.++|+.+...+....++.. .++|+||+|++|||.+..
T Consensus        71 dld~~~~~l~~~G~~~~~~~~~~~~~~~-~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          71 EFDAFYTRLKEAGVNILPGRKRDVRDRK-SIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             HHHHHHHHHHHcCCcccCCCccccCcce-EEEEECCCCCEEEEecCc
Confidence            4999999999999997655443333444 489999999999999875

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.67  E-value=9.1e-16  Score=112.71  Aligned_cols=113  Identities=18%  Similarity=0.272  Sum_probs=79.9

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeee----ecCcceeccCcceeEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTY----NYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~----~~~~~~~~~~~~~~h~~~  228 (291)
                      ++.++.|.|.|++++.+||+++|||++.....    .. ..+ ..     ...+.+..    .........+.+..|++|
T Consensus         2 ~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~----~~-~~~-~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~   70 (120)
T cd09011           2 KFKNPLLVVKDIEKSKKFYEKVLGLKVVMDFG----EN-VTF-EG-----GFALQEGYSWLEGISKADIIEKSNNFELYF   70 (120)
T ss_pred             EEEEEEEEECCHHHHHHHHHHhcCCEEeeccC----ce-EEE-ec-----cceeccchhhhccCCcccccccCCceEEEE
Confidence            57889999999999999999999998753221    11 111 10     11111110    000111123345579999


Q ss_pred             EecchhhhHHHHHHHHHHhCC-eeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          229 STDDVYKSAEVVNLVTQELGG-KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~-~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      .|+|++++++++    +++|+ +++.+|...++ +.+.+||+|||||+|||.+.
T Consensus        71 ~v~dvd~~~~~l----~~~g~~~~~~~~~~~~~-g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          71 EEEDFDAFLDKL----KRYDNIEYVHPIKEHPW-GQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             EehhhHHHHHHH----HhcCCcEEecCcccCCC-ccEEEEEECCCCCEEEEecc
Confidence            999999999999    99986 78888888887 46899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=1.4e-15  Score=111.08  Aligned_cols=117  Identities=23%  Similarity=0.327  Sum_probs=83.7

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce--eccCcceeEEEEEecch
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDDV  233 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~~~v~di  233 (291)
                      ||.|.|.|++++.+||.++|||++.......+ ...++.+..... ....+.+........  ...+.+..|++|.|+|+
T Consensus         1 Hv~l~v~d~~~~~~fY~~~lG~~~~~~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di   78 (119)
T cd07263           1 LVSLYVDDQDKALAFYTEKLGFEVREDVPMGG-GFRWVTVAPPGS-PETSLVLAPPANPAAMSGLQPGGTPGLVLATDDI   78 (119)
T ss_pred             CceEEeCCHHHHHHHHHhccCeEEEEeeccCC-CcEEEEEeCCCC-CeeEEEEeCCCCccccccccCCCceEEEEEehHH
Confidence            78999999999999999999999876543222 234444432211 134454433222210  12345778999999999


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +++.+++    +++|+++..+|...++  ++.+|++||+|++|||+|
T Consensus        79 ~~~~~~l----~~~g~~~~~~~~~~~~--~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          79 DATYEEL----KARGVEFSEEPREMPY--GTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHH----HhCCCEEeeccccCCC--ceEEEEECCCCCEEEEeC
Confidence            9999999    9999999888844433  589999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.66  E-value=1.6e-15  Score=113.10  Aligned_cols=116  Identities=23%  Similarity=0.266  Sum_probs=79.5

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc-
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d-  232 (291)
                      +.||.|.|+|++++.+||+++|||++....   + ....  +..+    +..+.+....+........+..|++|.+++ 
T Consensus         1 i~HV~l~V~Dl~~a~~FY~~~LG~~~~~~~---~-~~~~--~~~~----~~~l~l~~~~~~~~~~~~~~~~hiaf~v~~~   70 (131)
T cd08363           1 INHMTFSVSNLDKSISFYKHVFMEKLLVLG---E-KTAY--FTIG----GTWLALNEEPDIPRNEIRQSYTHIAFTIEDS   70 (131)
T ss_pred             CceEEEEECCHHHHHHHHHHhhCCEEeccC---C-ccce--EeeC----ceEEEEEccCCCCcCCcCccceEEEEEecHH
Confidence            579999999999999999999999975421   1 1222  2221    234444332211111123467899999975 


Q ss_pred             -hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          233 -VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 -i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                       ++++++++    +++|+++..+|....+ +++.+||+||+||+|||.+....
T Consensus        71 dld~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~f~DPdG~~iEl~~~~~~  118 (131)
T cd08363          71 EFDAFYTRL----KEAGVNILPGRKRDVR-DRKSIYFTDPDGHKLEVHTGTLA  118 (131)
T ss_pred             HHHHHHHHH----HHcCCcccCCCccccC-cceEEEEECCCCCEEEEecCcHH
Confidence             66666666    9999998765544433 35889999999999999986653

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3.8e-15  Score=109.68  Aligned_cols=115  Identities=20%  Similarity=0.191  Sum_probs=82.1

Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCccee----ccCcceeEEEEEecc
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY----TKGNAYAQVAISTDD  232 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~----~~~~~~~h~~~~v~d  232 (291)
                      -.|.|.|++++.+||+++||+++.......++......+..+    ...+.+.........    ...++..|++|.|+|
T Consensus         3 p~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           3 PTLRYRDAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFG----DGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEEC----CEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            468899999999999999999987654333332222223322    123333322211111    133467899999999


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      ++++++++    +++|++++.+|...++ |.+.++++||+||+|+|.+
T Consensus        79 ~d~~~~~l----~~~G~~v~~~~~~~~~-g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERA----RAAGAEILREPTDTPY-GSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHH----HHCCCEEeeCccccCC-CcEEEEEECCCCCEEEEec
Confidence            99999999    9999999999888776 3588999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.66  E-value=4.9e-15  Score=112.20  Aligned_cols=114  Identities=20%  Similarity=0.407  Sum_probs=83.7

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      .+++|+.|.|+|++++.+||+++|||++.....  .   ...++..+....  .+.+...       ...++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~~~--~~~l~~~-------~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSDHH--SIAIARG-------PHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCCcc--eEEEccC-------CCCceEEEEEECC
Confidence            389999999999999999999999999865432  1   235565543322  2333221       1247889999999


Q ss_pred             CHHHHH---HHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          102 DVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |++++.   ++|+++|+++...+.....+...++||+||+|+.+||++...
T Consensus        69 d~~~l~~~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMRGIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHHHHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            877765   899999999876654433344446889999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.66  E-value=6e-15  Score=113.27  Aligned_cols=117  Identities=18%  Similarity=0.193  Sum_probs=81.8

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc-ccCCCCeeEEEEEeC
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATE  101 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~~~v~  101 (291)
                      +++||+|.|+|++++.+||+++|||++..+..   +  ...++..+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            57999999999999999999999999876643   1  123333221 1233444443322111 122347899999998


Q ss_pred             C---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |   +++++++|+++|+.+.. +....  ....+||+||+|+.|||+...
T Consensus        75 d~~dvd~~~~~L~~~Gv~~~~-~~~~~--~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERLEALGLPVSG-IVDRF--YFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHHHHCCCCccc-ccccc--cEEEEEEECCCCcEEEEEECC
Confidence            8   89999999999997543 22222  334589999999999999875

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.66  E-value=4.3e-15  Score=109.83  Aligned_cols=120  Identities=22%  Similarity=0.296  Sum_probs=80.1

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC-ceeeEEEecCCCCceeEEEeeccCCCC--cccCCCCeeEEEEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVT--SYDIGTGFGHFAIA   99 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~i~~~   99 (291)
                      +|+|++|.|+|++++++||+++|||++..+....++ ....+++..........+.+.......  ......++.|++|.
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~   80 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFS   80 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEE
Confidence            478999999999999999999999998877543222 112333332211112234443222111  11233468899999


Q ss_pred             eC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+   ++++++++++++|+++...+..  ++. ..++|+||+|++|||+
T Consensus        81 v~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~-~~~~~~DP~G~~iE~~  126 (126)
T cd08346          81 VPSEASLDAWRERLRAAGVPVSGVVDH--FGE-RSIYFEDPDGLRLELT  126 (126)
T ss_pred             cCCHHHHHHHHHHHHHcCCcccceEee--cce-EEEEEECCCCCEEEeC
Confidence            98   5799999999999987654332  333 3588999999999984

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=8.4e-15  Score=107.69  Aligned_cols=116  Identities=21%  Similarity=0.219  Sum_probs=85.1

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC--CcccCCCCeeEEEEEeCCHH
Q 022871           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        27 v~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~i~~~v~d~~  104 (291)
                      +.|.|+|++++.+||+++|||++......+.+......+..++.  .  +.+......  .....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~--~--~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDS--V--LMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCE--E--EEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            45899999999999999999999877654444444455555432  2  223221111  11123346779999999999


Q ss_pred             HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++++++.+.|+++..++...++|.+ .++++||+|+.|+|.+.
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          81 ATFARAVAAGATSVMPPADQFWGDR-YGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHCCCeEecCcccccccce-EEEEECCCCCEEEEecC
Confidence            9999999999999888877777665 48999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.66  E-value=3.3e-15  Score=112.67  Aligned_cols=117  Identities=24%  Similarity=0.290  Sum_probs=83.1

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    .  ...++..+    +..+.+...........+.++.|++|.++
T Consensus         3 ~~i~hi~L~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~----g~~l~l~~~~~~~~~~~~~~~~hiaf~v~   72 (139)
T PRK04101          3 KGINHICFSVSNLEKSIEFYEKVLGAKLLVKG----R--KTAYFDLN----GLWIALNEEKDIPRNEIHQSYTHIAFSIE   72 (139)
T ss_pred             CcEEEEEEEecCHHHHHHHHHhccCCEEEeec----C--eeEEEecC----CeEEEeeccCCCCCccCCCCeeEEEEEec
Confidence            46899999999999999999999999976431    1  12223321    23444432211111112346789999997


Q ss_pred             --chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          232 --DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                        |++++++++    +++|+++...|...++ +++.+|++||+||+|||++...
T Consensus        73 ~~dv~~~~~~l----~~~G~~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~~  121 (139)
T PRK04101         73 EEDFDHWYQRL----KENDVNILPGRERDER-DKKSIYFTDPDGHKFEFHTGTL  121 (139)
T ss_pred             HHHHHHHHHHH----HHCCceEcCCccccCC-CceEEEEECCCCCEEEEEeCCH
Confidence              788888887    9999998777766655 3589999999999999997554

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=8.4e-15  Score=108.23  Aligned_cols=117  Identities=23%  Similarity=0.339  Sum_probs=79.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeec---c---CC--CCcccCCCCeeE
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY---N---YG--VTSYDIGTGFGH   95 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~--~~~~~~~~g~~~   95 (291)
                      +.|+.|.|+|++++.+||+++|||++.....  .+.+  ..+..+  ...+.+....   .   ..  .......++..+
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~--~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDY--GELETG--ETTLAFASHDLAESNLKGGFVKADPAQPPAGFE   74 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcE--EEecCC--cEEEEEEcccccccccccCccCCccccCCCcEE
Confidence            4699999999999999999999999865422  1111  112211  1111111100   0   00  011112223468


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++|.|+|++++++++.++|+++..++...++|.. .++++||+|+.+++++.
T Consensus        75 ~~~~v~di~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          75 IAFVTDDVAAAFARAVEAGAVLVSEPKEKPWGQT-VAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEcCCHHHHHHHHHHcCCEeccCCccCCCCcE-EEEEECCCCCEEEEecC
Confidence            9999999999999999999999888877777765 48899999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.65  E-value=2.7e-15  Score=113.61  Aligned_cols=117  Identities=17%  Similarity=0.283  Sum_probs=82.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|+.|.|.|++++.+||+++|||++.....  +   ...++..+..  ...+.+..       ...+++.|++|.|+
T Consensus         3 ~~l~Hv~i~V~Dle~s~~FY~~~LG~~~~~~~~--~---~~~~l~~~~~--~~~~~l~~-------~~~~~~~hiaf~v~   68 (144)
T cd07239           3 VKISHVVLNSPDVDKTVAFYEDVLGFRVSDWLG--D---QMAFLRCNSD--HHSIAIAR-------GPHPSLNHVAFEMP   68 (144)
T ss_pred             ceeeEEEEECCCHHHHHHHHHhcCCCEEEEeeC--C---eEEEEECCCC--cceEEEcc-------CCCCceEEEEEECC
Confidence            468999999999999999999999999764321  1   1233443222  33444432       11357889999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |++++.+ +.++|+++|+++...|........+++||+||+|++|||++...
T Consensus        69 d~~~l~~-~~~~l~~~Gi~~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~  119 (144)
T cd07239          69 SIDEVMR-GIGRMIDKGIDILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELE  119 (144)
T ss_pred             CHHHHHH-HHHHHHHcCCceeeCCcccCCCCCEEEEEECCCCcEEEeccCce
Confidence            9777652 22334999999887765543333577899999999999998654

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=1.2e-14  Score=107.41  Aligned_cols=117  Identities=26%  Similarity=0.401  Sum_probs=83.3

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC-CcccCCCCeeEEEEEe
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSYDIGTGFGHFAIAT  100 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~v  100 (291)
                      ++|+|+.|.|+|++++.+||+++|||++.....      ..+++..++  ....+.+...... .......++.|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~------~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERTD------STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcCC------CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            479999999999999999999999999986632      135555433  2233344332221 1223345789999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .   ++++++++|.++|+.+... ...+.  ...+|++||+|+++||....+
T Consensus        73 ~~~~~v~~~~~~l~~~g~~~~~~-~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRLIELGIPLVGA-SDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHHHHcCCceecc-ccccc--eeEEEEECCCCCEEEEEEecC
Confidence            7   4889999999999987543 22222  235889999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.65  E-value=8.6e-15  Score=108.00  Aligned_cols=112  Identities=19%  Similarity=0.316  Sum_probs=80.4

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      ..+++|+.|.|+|++++.+||+++|||++.....    .  ..++..++ .  ..+.+....      ...+..|++|.+
T Consensus         2 ~~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~----~--~~~~~~~~-~--~~l~~~~~~------~~~~~~h~a~~v   66 (123)
T cd08351           2 TVTLNHTIVPARDREASAEFYAEILGLPWAKPFG----P--FAVVKLDN-G--VSLDFAQPD------GEIPPQHYAFLV   66 (123)
T ss_pred             cceEeEEEEEcCCHHHHHHHHHHhcCCEeeeccC----C--EEEEEcCC-C--cEEEEecCC------CCCCcceEEEEe
Confidence            4688999999999999999999999999865321    1  22333322 2  223333211      112467899888


Q ss_pred             C--CHHHHHHHHHHcCCeEecCCccc-------CCCceEEEEEECCCCCEEEEEeCC
Q 022871          101 E--DVYKLVENIRAKGGNVTREPGPL-------KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~--d~~~~~~~l~~~G~~~~~~~~~~-------~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +  |+++++++|.++|+++...|...       .+|.+ .++|+||+|+.|||++.+
T Consensus        67 ~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~f~DPdG~~iEl~~~~  122 (123)
T cd08351          67 SEEEFDRIFARIRERGIDYWADPQRTEPGQINTNDGGR-GVYFLDPDGHLLEIITRP  122 (123)
T ss_pred             CHHHHHHHHHHHHHcCCceecCCcccccccccCCCCee-EEEEECCCCCEEEEEecc
Confidence            6  69999999999999987665443       23444 599999999999999863

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=2.7e-15  Score=108.56  Aligned_cols=113  Identities=26%  Similarity=0.322  Sum_probs=79.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCC-cccCCCCeeEEEEEeCC
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT-SYDIGTGFGHFAIATED  102 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~i~~~v~d  102 (291)
                      |+|++|.|+|++++.+||+++|||++..+...+.   ...++..++. ..  +.+....... ....+.+..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~---~~~~~~~~~~-~~--i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF---PGAWLYAGDG-PQ--LHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC---CceEEEeCCC-cE--EEEEecCCCccccCCCcccceEEEEeCC
Confidence            5899999999999999999999999875533221   2345554432 12  2232221111 11234467899999999


Q ss_pred             HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEE
Q 022871          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      +++++++++++|+++...+.. ..+.. .+++.||+|+++||
T Consensus        75 ~~~~~~~l~~~g~~~~~~~~~-~~~~~-~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARLKAAGVPYTESDVP-GDGVR-QLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHHHHcCCCcccccCC-CCCcc-EEEEECCCCCEEeC
Confidence            999999999999998876544 33334 48899999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.65  E-value=4.7e-15  Score=115.08  Aligned_cols=120  Identities=20%  Similarity=0.203  Sum_probs=81.7

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|++|.|+|++++.+||+++|||++........+.....++.....  ...+.+...  ..  ...+++.|++|.|+
T Consensus         5 ~~i~Hi~l~V~Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~l~~~--~~--~~~~~~~hiaf~v~   78 (166)
T cd09014           5 RRLDHVNLLASDVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNK--VHDVAYTRD--PA--GARGRLHHLAYALD   78 (166)
T ss_pred             ceeeeEEEEcCCHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCC--ceeEEEecC--CC--CCCCCceEEEEECC
Confidence            4689999999999999999999999997655432222222233332221  223433221  11  12246789999998


Q ss_pred             chh---hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          232 DVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |.+   ++++++    ++.|+++...|..+.....+++|++||+|++|||++.
T Consensus        79 ~~~~l~~~~~~l----~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          79 TREDVLRAADIF----LENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             CHHHHHHHHHHH----HHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            744   444555    9999998777766554334569999999999999987

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.65  E-value=6.9e-15  Score=110.85  Aligned_cols=114  Identities=19%  Similarity=0.234  Sum_probs=82.6

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCH-
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV-  103 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~-  103 (291)
                      .||.|.|+|++++.+||+++|||++..+...     ...|+.......+..+.+..       ....+++|++|.|+|+ 
T Consensus         1 ~Hv~l~V~Dle~s~~Fy~~vLG~~~~~~~~~-----~~~~l~~~~~~~~h~~~~~~-------~~~~gl~Hiaf~v~~~~   68 (141)
T cd07258           1 GHVVIGSENFEASRDSLVEDFGFRVSDLIED-----RIVFMRCHPNPFHHTFAVGP-------ASSSHFHHVNFMVTDID   68 (141)
T ss_pred             CcEEEecCCHHHHHHHHHhcCCCEeeeeeCC-----EEEEEEcCCCCCcceeeecc-------CCCCceEEEEEECCCHH
Confidence            4999999999999999999999998766421     24555533222222222211       1234899999999765 


Q ss_pred             --HHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871          104 --YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       104 --~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                        ++++++|.++|+++...|...+.+...++||+||+|+.||+......
T Consensus        69 ~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  117 (141)
T cd07258          69 DIGKALYRIKAHDVKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEE  117 (141)
T ss_pred             HHHHHHHHHHHCCCcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcce
Confidence              56799999999998776665554444568999999999999887643

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.65  E-value=3.9e-15  Score=111.11  Aligned_cols=117  Identities=25%  Similarity=0.288  Sum_probs=83.7

Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchh
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~  234 (291)
                      .||.|.|+|++++++||+++||+++......+ +.....++..+.  ....+.+....      ..++..|++|.|+|++
T Consensus         1 ~Hv~l~V~dl~~a~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~--~~~~l~~~~~~------~~~~~~hl~~~v~d~~   71 (131)
T cd08343           1 DHVVLRTPDVAATAAFYTEVLGFRVSDRVGDP-GVDAAAFLRCDE--DHHDLALFPGP------ERPGLHHVAFEVESLD   71 (131)
T ss_pred             CcEEEEcCCHHHHHHHHHhcCCCEEEEEEccC-CceeEEEEEcCC--CcceEEEEcCC------CCCCeeEEEEEcCCHH
Confidence            48999999999999999999999976543322 222334444322  23345544311      1457899999999865


Q ss_pred             ---hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          235 ---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       235 ---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                         +.++++    +++|+++...|...+.++.+++||+||+|++|||++...-
T Consensus        72 ~~~~~~~~l----~~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          72 DILRAADRL----AANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             HHHHHHHHH----HHcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence               445555    9999999888776665446889999999999999986653

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=8e-15  Score=107.44  Aligned_cols=112  Identities=22%  Similarity=0.266  Sum_probs=79.8

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC--C---cccCCCCeeEEEEE
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--T---SYDIGTGFGHFAIA   99 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~g~~~i~~~   99 (291)
                      .+..|.|+|++++.+||+++|||++.....      ...++..++.  .+.+.+......  .   ....+.+ .|++|.
T Consensus         3 ~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~-~~~~~~   73 (119)
T cd08359           3 LYPVIVTDDLAETADFYVRHFGFTVVFDSD------WYVSLRSPDG--GVELAFMLPGHETVPAAQYQFQGQG-LILNFE   73 (119)
T ss_pred             ceeEEEECCHHHHHHHHHHhhCcEEEeccC------cEEEEecCCC--ceEEEEccCCCCCCcchhcccCCce-EEEEEE
Confidence            367899999999999999999999876521      1233433322  233333221111  1   1112334 489999


Q ss_pred             eCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      |+|+++++++|.++|+++..++...++|.+. ++++||+|++|+|++
T Consensus        74 v~did~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~G~~ie~~~  119 (119)
T cd08359          74 VDDVDAEYERLKAEGLPIVLPLRDEPWGQRH-FIVRDPNGVLIDIVQ  119 (119)
T ss_pred             ECCHHHHHHHHHhcCCCeeeccccCCCcceE-EEEECCCCCEEEEEC
Confidence            9999999999999999988777777776554 889999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.65  E-value=3.5e-15  Score=110.63  Aligned_cols=118  Identities=24%  Similarity=0.361  Sum_probs=85.1

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccC-CcceeEEEecccCCCceeEEEeeeecCcce------eccCcceeEE
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYAQV  226 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~h~  226 (291)
                      +.||.|.|.|++++.+||+++|||++....... +......++..+    ...+++..+.....      ...+++..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLG----NVQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcC----CEEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999987654432 223344555432    45566665433211      1245688999


Q ss_pred             EEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCC---CCeEEEEe
Q 022871          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD---GWKTVLVD  280 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~---G~~iel~~  280 (291)
                      +|.|+|++++++++    .++|+++..+|.....+ ++.+++.||+   |+.|||++
T Consensus        77 ~f~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARL----KAQGVRLLQEGPRIGAG-GKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHH----HHCCCeeeccCCCccCC-CCEEEEEecCCCceEEEEecC
Confidence            99999999999999    99999998887644443 3555555555   99999985

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.65  E-value=7.9e-15  Score=107.71  Aligned_cols=113  Identities=18%  Similarity=0.249  Sum_probs=80.8

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +++.||+|.|+|++++.+||+++|||++..+..  .   ..+++..++.  .+.+.+...       ...+..|++|.++
T Consensus         1 ~~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~---~~~~~~~~~~--~~~~~l~~~-------~~~~~~~~~f~v~   66 (120)
T cd07252           1 KSLGYLGVESSDLDAWRRFATDVLGLQVGDRPE--D---GALYLRMDDR--AWRIAVHPG-------EADDLAYAGWEVA   66 (120)
T ss_pred             CcccEEEEEeCCHHHHHHHHHhccCceeccCCC--C---CeEEEEccCC--ceEEEEEeC-------CCCceeEEEEEEC
Confidence            468999999999999999999999999865421  1   1345554332  333433321       1236789999996


Q ss_pred             ---CHHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEeCC
Q 022871          102 ---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                         |+++++++|+++|+++...+...  ..+...+++|+|||||.|||....
T Consensus        67 ~~~dl~~~~~~l~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          67 DEAALDALAARLRAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence               58899999999999987654321  222334689999999999998764

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.65  E-value=7.2e-16  Score=114.16  Aligned_cols=120  Identities=23%  Similarity=0.250  Sum_probs=78.7

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeecc--CCcceeEEEecccCCCceeEEEeeeecCcceecc---CcceeEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK--PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK---GNAYAQVA  227 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~---~~~~~h~~  227 (291)
                      +++||+|.|.|++++.+||+++|||++......  .........+..+.  ....+......+......   .....|++
T Consensus         1 ~l~Hi~i~v~d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~i~   78 (128)
T PF00903_consen    1 GLDHIAIRVKDLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGE--GHIELFLNPSPPPRASGHSFPEHGGHHIA   78 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTS--SCEEEEEEESSSSSSEEEHHHSHTSEEEE
T ss_pred             CeEEEEEEcCCHHHHHHHHHHHhCCcEEeeeccccccccccceeecccc--cceeeeeeccccccccccccccccceeEE
Confidence            478999999999999999999999998876651  22223334444222  233333322222111111   01345677


Q ss_pred             EEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEE
Q 022871          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel  278 (291)
                      +.+.+   ++++.++|    ++.|+++..+|.+..+.....+|++||+|++|||
T Consensus        79 ~~~~~~~dl~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   79 FLAFDVDDLDAAYERL----KAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             EEESSHHHHHHHHHHH----HHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             EEeccHHHHHHHHHHH----hhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            76665   45555555    9999999999888777555557899999999997

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.65  E-value=1e-14  Score=106.50  Aligned_cols=111  Identities=26%  Similarity=0.428  Sum_probs=83.6

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++++|+.|.|+|++++.+||+++|||++..+.+      ..+++..+. .....+.+...       ...++.|++|.|.
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA------GSVYLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC------CeEEEecCC-CCcEEEEEEeC-------CCCCceeEEEEcC
Confidence            478999999999999999999999999887642      135555542 22233333222       1247889999997


Q ss_pred             ---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          102 ---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                         ++++++++++++|+++...+...+++.. .+++.||+|+++|+...
T Consensus        67 ~~~~v~~~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          67 SEEDLEALAAHLEAAGVAPEEASDPEPGVGR-GLRFQDPDGHLLELFVE  114 (117)
T ss_pred             CHHHHHHHHHHHHHcCCceEEcCccCCCCce-EEEEECCCCCEEEEEEc
Confidence               6889999999999998877654454444 48999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.65  E-value=4.3e-15  Score=109.83  Aligned_cols=115  Identities=22%  Similarity=0.301  Sum_probs=79.7

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec--------C--cceeccCcce
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--------G--VTEYTKGNAY  223 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--------~--~~~~~~~~~~  223 (291)
                      +.|+.|.|+|++++.+||+++|||.......  +..+..  +..+    ...+.+....        .  +......++.
T Consensus         1 ~~~~~l~v~D~~~s~~FY~~~lG~~~~~~~~--~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (125)
T cd07264           1 FGYTIIYVEDVEKTLEFYERAFGFERRFLHE--SGDYGE--LETG----ETTLAFASHDLAESNLKGGFVKADPAQPPAG   72 (125)
T ss_pred             CceEEEEEcCHHHHHHHHHHhhCCeEEeecC--CCcEEE--ecCC----cEEEEEEcccccccccccCccCCccccCCCc
Confidence            4689999999999999999999998754221  111221  1111    1111111100        0  0001122345


Q ss_pred             eEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       224 ~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      .|++|.|+|++++++++    +++|+++..+|...++ +.+.++++||+|+.|||+++
T Consensus        73 ~~~~~~v~di~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          73 FEIAFVTDDVAAAFARA----VEAGAVLVSEPKEKPW-GQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCEeccCCccCCC-CcEEEEEECCCCCEEEEecC
Confidence            79999999999999999    9999999888888777 45889999999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.64  E-value=3.1e-15  Score=110.91  Aligned_cols=119  Identities=29%  Similarity=0.506  Sum_probs=83.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC-CCceeeEEEecCCCCceeEEEeeccCCC-Cc-----ccCCCCeeEE
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-EEKYSNAFLGFGPEQSHFVVELTYNYGV-TS-----YDIGTGFGHF   96 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~g~~~i   96 (291)
                      |+||+|.|+|++++.+||+++|||+........ .+....+++..++    ..+.+..+... .+     ...+.|..|+
T Consensus         1 ~~hv~l~v~d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~l~l~~~~~~~~~~~~~~~~~~~g~~h~   76 (128)
T cd07249           1 IDHIGIAVPDLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGN----VQIELIEPLDDDSPIAKFLEKRGEGLHHI   76 (128)
T ss_pred             CcEEEEEeCCHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCC----EEEEEEEECCCCCcHHHHHhcCCCceEEE
Confidence            579999999999999999999999997765432 2334456665432    23333322211 11     1346789999


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCC--CCEEEEEe
Q 022871           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD--GYIFELIQ  146 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~--G~~iel~~  146 (291)
                      +|.|+|+++++++++++|+++..++.....+...+.++.+|+  |++|||++
T Consensus        77 ~f~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          77 AFEVDDIDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             EEEeCCHHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999999999998887653444444434444444  99999975

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.64  E-value=4.9e-15  Score=108.96  Aligned_cols=112  Identities=21%  Similarity=0.236  Sum_probs=76.4

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++||+++.....    .  ..++...+......+.+..       ...++..|++|.+
T Consensus         4 i~~i~hv~l~v~dl~~a~~FY~~~lG~~~~~~~~----~--~~~l~~~~~~~~~~~~l~~-------~~~~~~~h~af~v   70 (121)
T cd09013           4 IAHLAHVELLTPKPEESLWFFTDVLGLEETGREG----Q--SVYLRAWGDYEHHSLKLTE-------SPEAGLGHIAWRA   70 (121)
T ss_pred             ccEeeEEEEEeCCHHHHHHHHHhCcCCEEEeecC----C--eEEEEeccCCCccEEEEee-------CCCCceEEEEEEc
Confidence            3578999999999999999999999999775421    1  1223221211233444432       1235789999999


Q ss_pred             cc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      ++   +++..+++    +++|+++...+.. ++ .++.+||+||+||+|||+..
T Consensus        71 ~~~~~v~~~~~~l----~~~G~~~~~~~~~-~~-~~~~~~~~DPdG~~iEl~~~  118 (121)
T cd09013          71 SSPEALERRVAAL----EASGLGIGWIEGD-PG-HGKAYRFRSPDGHPMELYWE  118 (121)
T ss_pred             CCHHHHHHHHHHH----HHcCCccccccCC-CC-CcceEEEECCCCCEEEEEEe
Confidence            86   44455555    9999987443322 22 24789999999999999864

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.64  E-value=1.5e-14  Score=105.06  Aligned_cols=111  Identities=22%  Similarity=0.314  Sum_probs=80.2

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      |++++|+.|.|+|++++.+||++ |||+...+..   +   ..++..++.. ...+.....       ...++.|++|.|
T Consensus         1 ~~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~~---~---~~~~~~~~~~-~~~~~~~~~-------~~~~~~~~af~v   65 (113)
T cd07267           1 LTDIAHVRFEHPDLDKAERFLTD-FGLEVAARTD---D---ELYYRGYGTD-PFVYVARKG-------EKARFVGAAFEA   65 (113)
T ss_pred             CcEEEEEEEccCCHHHHHHHHHH-cCCEEEEecC---C---eEEEecCCCc-cEEEEcccC-------CcCcccEEEEEE
Confidence            57899999999999999999999 9999865532   1   2445432222 222222111       124788999999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.+++.+.++++|......+. .+++.. .++|+||+|+.+||+...
T Consensus        66 ~~~~~~~~~~~~~g~~~~~~~~-~~~~~~-~~~~~DPdG~~iEl~~~~  111 (113)
T cd07267          66 ASRADLEKAAALPGASVIDDLE-APGGGK-RVTLTDPDGFPVELVYGQ  111 (113)
T ss_pred             CCHHHHHHHHHcCCCeeecCCC-CCCCce-EEEEECCCCCEEEEEecc
Confidence            9999999999999998765432 344444 589999999999998763

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=1.8e-14  Score=106.94  Aligned_cols=116  Identities=22%  Similarity=0.338  Sum_probs=81.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhc---CCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc--c-cCCCCeeEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECF---GMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS--Y-DIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~L---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~g~~~i   96 (291)
                      +|+||.|.|+|++++.+||+++|   ||++..+..  ..   ..|... ...  ..+.+.......+  . ..+.++.|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~~---~~~~~~-~~~--~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--DG---RSWRAG-DGG--TYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--cC---ceEEec-CCc--eEEEEEecccCCCcccccCCcCeeEE
Confidence            58999999999999999999999   999877642  11   123322 122  2334433322111  1 234578999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEe
Q 022871           97 AIATE---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +|.|+   |+++++++|+++|+.+...+...  ..+....+|++||+|+++||+.
T Consensus        73 a~~v~~~~d~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            99997   48899999999999988766542  2223345899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.64  E-value=4e-15  Score=114.27  Aligned_cols=117  Identities=16%  Similarity=0.118  Sum_probs=80.9

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEEEec
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~~v~  231 (291)
                      .+.||+|.|+|++++.+||+++|||++.....   .  .+.+...+. ..+..+.+........ .....++.|++|.|+
T Consensus         1 gl~HI~i~V~Dle~s~~FY~~~LG~~~~~~~~---~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~l~Hiaf~v~   74 (157)
T cd08347           1 GLHGVTLTVRDPEATAAFLTDVLGFREVGEEG---D--RVRLEEGGG-GPGAVVDVLEEPDQPRGRPGAGTVHHVAFRVP   74 (157)
T ss_pred             CcccEEEEeCCHHHHHHHHHHhcCCEEEeeeC---C--EEEEEecCC-CCCCEEEEEeCCCCCCCcccCCceEEEEEECC
Confidence            36899999999999999999999999875432   1  222222111 1245666655322111 122357889999999


Q ss_pred             c---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 D---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      |   ++++++++    +++|+++. .+....+  .+.+||+||+|+.|||++..
T Consensus        75 d~~dvd~~~~~L----~~~Gv~~~-~~~~~~~--~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          75 DDEELEAWKERL----EALGLPVS-GIVDRFY--FKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             CHHHHHHHHHHH----HHCCCCcc-ccccccc--EEEEEEECCCCcEEEEEECC
Confidence            8   66666666    99999754 3333333  47899999999999999865

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.64  E-value=5e-15  Score=109.22  Aligned_cols=117  Identities=21%  Similarity=0.311  Sum_probs=82.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc---ceeccCcceeEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h~~~  228 (291)
                      .++.|+.|.|.|++++.+||+++|||+.......  ..+..+...      ...+++......   .....+++..|++|
T Consensus         2 ~~l~hi~l~v~d~~~s~~Fy~~~lG~~~~~~~~~--~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~~~~~~hi~~   73 (125)
T cd07253           2 KRIDHVVLTVADIEATLDFYTRVLGMEVVRFGEE--VGRKALRFG------SQKINLHPVGGEFEPAAGSPGPGSDDLCL   73 (125)
T ss_pred             cccceEEEEecCHHHHHHHHHHHhCceeeccccc--CCceEEEeC------CEEEEEecCCCccCcCccCCCCCCceEEE
Confidence            4689999999999999999999999997654321  122222222      134444332211   11123457889999


Q ss_pred             Eecc-hhhhHHHHHHHHHHhCCeeecCCcccCC--CCceEEEEECCCCCeEEEEe
Q 022871          229 STDD-VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~d-i~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~Dp~G~~iel~~  280 (291)
                      .+++ ++++.+++    +++|+++...|...++  +.++.+|++||+|++||+++
T Consensus        74 ~~~~~~~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          74 ITEPPIDELVAHL----EAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             EecccHHHHHHHH----HHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            9975 88888888    9999998877765432  23578999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.63  E-value=1.5e-14  Score=106.05  Aligned_cols=113  Identities=25%  Similarity=0.365  Sum_probs=81.8

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +.+|+|+.|.|+|++++.+||+++|||++.....      ...++..++. ....+.+...       ..++..|++|.+
T Consensus         1 ~~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~~~v   66 (120)
T cd08362           1 VTALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD------GIVYLRATGS-EHHILRLRRS-------DRNRLDVVSFSV   66 (120)
T ss_pred             CceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC------CEEEEECCCC-ccEEEEeccC-------CCCCCceEEEEe
Confidence            4689999999999999999999999999875532      1344443322 2223333211       123678999999


Q ss_pred             ---CCHHHHHHHHHHcCCeEecCCcc--cCCCceEEEEEECCCCCEEEEEeCC
Q 022871          101 ---EDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                         +++++++++|+++|+++...+..  .+++.+ .++|.||+|+.++|+...
T Consensus        67 ~~~~~l~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          67 ASRADVDALARQVAARGGTVLSEPGATDDPGGGY-GFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CCHHHHHHHHHHHHHcCCceecCCcccCCCCCce-EEEEECCCCCEEEEEecc
Confidence               57899999999999998766532  233433 488999999999998764

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.63  E-value=4.5e-15  Score=109.13  Aligned_cols=114  Identities=25%  Similarity=0.216  Sum_probs=78.6

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....    ..  .++..........+.+..       ...++..|++|.|.
T Consensus         3 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~hi~~~v~   69 (121)
T cd07266           3 LRLGHVELRVTDLEKSREFYVDVLGLVETEEDD----DR--IYLRGLEEFIHHSLVLTK-------APVAGLGHIAFRVR   69 (121)
T ss_pred             ceeeEEEEEcCCHHHHHHHHHhccCCEEeccCC----Ce--EEEEecCCCceEEEEEee-------CCCCceeEEEEECC
Confidence            468999999999999999999999999765321    12  222211111233444422       11247889999995


Q ss_pred             ---chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 ---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                         |++++.+++    +++|+++...|.....+.++.+|+.||+|++|||+...
T Consensus        70 ~~~dv~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          70 SEEDLDKAEAFF----QELGLPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CHHHHHHHHHHH----HHcCCCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence               566666666    99999987765443333357899999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.63  E-value=9.8e-15  Score=108.90  Aligned_cols=118  Identities=16%  Similarity=0.173  Sum_probs=78.1

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc--ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      ..+.|++|.|+|++++.+||+++||+++.........  ....++.. +    ...+.+.....    ...++..|++|.
T Consensus         3 ~~i~hv~l~V~dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~----~~~i~l~~~~~----~~~~~~~Hiaf~   73 (131)
T cd08364           3 EGLSHITLIVKDLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLI-G----GLWIAIMEGDS----LQERTYNHIAFK   73 (131)
T ss_pred             ccEeEEEEEeCCHHHHHHHHHHHhCCeeEEecccccccccceeEEEc-C----CeEEEEecCCC----CCCCCceEEEEE
Confidence            3689999999999999999999999986543221110  00011111 1    23455543211    122468899999


Q ss_pred             ec--chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          230 TD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |+  +++++.++|    +++|+++..+... ..+.++.+||+||+||.|||.....
T Consensus        74 v~~~~ld~~~~~l----~~~gv~~~~~~~~-~~~~g~~~yf~DPdG~~iEl~~~~~  124 (131)
T cd08364          74 ISDSDVDEYTERI----KALGVEMKPPRPR-VQGEGRSIYFYDFDNHLFELHTGTL  124 (131)
T ss_pred             cCHHHHHHHHHHH----HHCCCEEecCCcc-ccCCceEEEEECCCCCEEEEecCCH
Confidence            97  466666666    9999987543322 2323689999999999999997554

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.63  E-value=1e-14  Score=107.17  Aligned_cols=115  Identities=20%  Similarity=0.220  Sum_probs=83.1

Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc--eeccCcceeEEEEEecchh
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~~~~~~~~h~~~~v~di~  234 (291)
                      ..|.|.|++++.+||+++||+.+.......++......+..+    ...+.+....+..  ....+.+..|++|.|+|++
T Consensus         5 ~~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~~   80 (122)
T cd07246           5 PYLIVRDAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIG----DSVLMLADEFPEHGSPASWGGTPVSLHLYVEDVD   80 (122)
T ss_pred             EEEEECCHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEEC----CEEEEEecCCcccCCCCCCCCceEEEEEEeCCHH
Confidence            458899999999999999999987655433333333333322    2345554322210  0012346789999999999


Q ss_pred             hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          235 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      ++++++    .+.|+++..+|...++ +.+.++++||+|++|+|++
T Consensus        81 ~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~~~l~~  121 (122)
T cd07246          81 ATFARA----VAAGATSVMPPADQFW-GDRYGGVRDPFGHRWWIAT  121 (122)
T ss_pred             HHHHHH----HHCCCeEecCcccccc-cceEEEEECCCCCEEEEec
Confidence            999999    9999999888876666 4689999999999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.63  E-value=7.1e-15  Score=105.81  Aligned_cols=120  Identities=27%  Similarity=0.343  Sum_probs=91.5

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ...+.|..|.+.|++++++||.++|||+........+..|..+.... ....+. +.-  ..   ....++..+.+.|.|
T Consensus         7 ~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~-~~~gG~-l~~--~~---~~~p~~~~~~iy~~v   79 (127)
T COG3324           7 KGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADG-AGAGGG-LMA--RP---GSPPGGGGWVIYFAV   79 (127)
T ss_pred             CCccEEEeeecCCHHHHHHHHHHhhCceecccccCCCceEEEEECCC-ccccce-ecc--CC---cCCCCCCCEEEEEec
Confidence            46788999999999999999999999998766555455555554432 122222 211  11   112225678999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +|++++++++    +++|++++.++...|+ +++.+.+.||.||+|.|.+..
T Consensus        80 ~did~~l~rv----~~~GG~V~~p~~~~p~-~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          80 DDIDATLERV----VAAGGKVLRPKTEFPG-GGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             CChHHHHHHH----HhcCCeEEecccccCC-ceEEEEEECCCCCEEEEeecC
Confidence            9999999999    9999999999999886 369999999999999998753

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.62  E-value=8.8e-15  Score=108.13  Aligned_cols=119  Identities=19%  Similarity=0.226  Sum_probs=78.9

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC--cceeEEEecccCCCceeEEEeeeecCcce--eccCcceeEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~~  228 (291)
                      .+.|+.|.|.|++++.+||+++|||++.......+  ..+.+.+.. .....+..+++........  .....+..|++|
T Consensus         1 ~i~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f   79 (126)
T cd08346           1 GLHHVTLITRDAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGD-GLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAF   79 (126)
T ss_pred             CcccEEEEcCChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEec-CCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEE
Confidence            36899999999999999999999999775543222  122232222 1111234566654322211  112346789999


Q ss_pred             Eecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          229 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      .|+|   ++++++++    +++|+++..++..  + +.+.+|++||+|++|||+
T Consensus        80 ~v~~~~~~~~~~~~~----~~~g~~~~~~~~~--~-~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          80 SVPSEASLDAWRERL----RAAGVPVSGVVDH--F-GERSIYFEDPDGLRLELT  126 (126)
T ss_pred             EcCCHHHHHHHHHHH----HHcCCcccceEee--c-ceEEEEEECCCCCEEEeC
Confidence            9985   45566666    9999998654433  2 358899999999999985

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.62  E-value=8.8e-15  Score=107.94  Aligned_cols=111  Identities=16%  Similarity=0.215  Sum_probs=79.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    +.+..+.+.  .   +..+.+...  .    ...+..|++|.++
T Consensus         3 ~~~~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~----~~~~~~~~~--~---~~~l~~~~~--~----~~~~~~h~a~~v~   67 (123)
T cd08351           3 VTLNHTIVPARDREASAEFYAEILGLPWAKPF----GPFAVVKLD--N---GVSLDFAQP--D----GEIPPQHYAFLVS   67 (123)
T ss_pred             ceEeEEEEEcCCHHHHHHHHHHhcCCEeeecc----CCEEEEEcC--C---CcEEEEecC--C----CCCCcceEEEEeC
Confidence            46789999999999999999999999876421    112222222  1   244554432  1    1234579999886


Q ss_pred             --chhhhHHHHHHHHHHhCCeeecCCccc------CCCCceEEEEECCCCCeEEEEec
Q 022871          232 --DVYKSAEVVNLVTQELGGKITRQPGSI------PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~p~~~------~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                        |+++.++++    ++.|+++...|...      ...+++.+||+||+||.|||+++
T Consensus        68 ~~dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          68 EEEFDRIFARI----RERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HHHHHHHHHHH----HHcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence              577787777    99999987776543      12346999999999999999986

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.62  E-value=8.3e-15  Score=107.59  Aligned_cols=111  Identities=15%  Similarity=0.176  Sum_probs=77.4

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d  232 (291)
                      ++.||.|.|+|++++.+||+++|||++.....   .. . .++..++  .+..+.+...       ..++..|++|.+++
T Consensus         2 ~l~~v~l~v~Dl~~s~~FY~~~LG~~~~~~~~---~~-~-~~~~~~~--~~~~~~l~~~-------~~~~~~~~~f~v~~   67 (120)
T cd07252           2 SLGYLGVESSDLDAWRRFATDVLGLQVGDRPE---DG-A-LYLRMDD--RAWRIAVHPG-------EADDLAYAGWEVAD   67 (120)
T ss_pred             cccEEEEEeCCHHHHHHHHHhccCceeccCCC---CC-e-EEEEccC--CceEEEEEeC-------CCCceeEEEEEECC
Confidence            58899999999999999999999998754321   11 2 2233222  2444555321       12467899999975


Q ss_pred             ---hhhhHHHHHHHHHHhCCeeecCCccc--CCCCceEEEEECCCCCeEEEEec
Q 022871          233 ---VYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 ---i~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                         +++.+++|    +++|+++...|...  ..++++.+|++|||||.|||+..
T Consensus        68 ~~dl~~~~~~l----~~~Gv~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~  117 (120)
T cd07252          68 EAALDALAARL----RAAGVAVEEGSAELAAERGVEGLIRFADPDGNRHELFWG  117 (120)
T ss_pred             HHHHHHHHHHH----HHcCCeEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEec
Confidence               66666666    99999987655321  22234789999999999999864

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=5.1e-15  Score=107.11  Aligned_cols=113  Identities=22%  Similarity=0.135  Sum_probs=79.5

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEEEecc
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~~v~d  232 (291)
                      ++|++|.|.|++++.+||+++|||.+........ ...+  +..++.   ..+.+........ ...+++..|++|.|+|
T Consensus         1 i~Hi~l~v~d~~~~~~FY~~~lG~~~~~~~~~~~-~~~~--~~~~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d   74 (114)
T cd07245           1 LDHVALRVPDLEASRAFYTDVLGLEEGPRPPFLF-PGAW--LYAGDG---PQLHLIEEDPPDALPEGPGRDDHIAFRVDD   74 (114)
T ss_pred             CCeEEEecCCHHHHHHHHHHccCCcccCcCCCCC-CceE--EEeCCC---cEEEEEecCCCccccCCCcccceEEEEeCC
Confidence            5799999999999999999999998765432221 1122  222221   2444443322211 1234567899999999


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEE
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel  278 (291)
                      ++++++++    .++|+++..++... . +.+.+|+.||+|++|||
T Consensus        75 ~~~~~~~l----~~~g~~~~~~~~~~-~-~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          75 LDAFRARL----KAAGVPYTESDVPG-D-GVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HHHHHHHH----HHcCCCcccccCCC-C-CccEEEEECCCCCEEeC
Confidence            99999999    99999988877552 2 35789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.62  E-value=6.8e-15  Score=108.69  Aligned_cols=112  Identities=18%  Similarity=0.224  Sum_probs=78.2

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.||.|.|+|++++.+||+++|||++....   + .  ..++..+.  .+..+.+...        .++..|++|.|+
T Consensus         5 ~~l~~v~l~v~d~~~s~~FY~~vLG~~~~~~~---~-~--~~~l~~~~--~~~~i~l~~~--------~~~~~~iaf~v~   68 (124)
T cd08361           5 QDIAYVRLGTRDLAGATRFATDILGLQVAERT---A-K--ATYFRSDA--RDHTLVYIEG--------DPAEQASGFELR   68 (124)
T ss_pred             EEeeEEEEeeCCHHHHHHHHHhccCceeccCC---C-C--eEEEEcCC--ccEEEEEEeC--------CCceEEEEEEEC
Confidence            46899999999999999999999999976432   1 1  22344322  2344444321        135679999998


Q ss_pred             c---hhhhHHHHHHHHHHhCCeeecCCcccC--CCCceEEEEECCCCCeEEEEechh
Q 022871          232 D---VYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |   ++++.+++    +++|+++...+....  ..+.+++||+|||||.|||+.+..
T Consensus        69 ~~~dv~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~  121 (124)
T cd08361          69 DDDALESAATEL----EQYGHEVRRGTAEECELRKVKAFIAFRDPSGNSIELVVRPS  121 (124)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCHHHhhcCCcceEEEEECcCCCEEEEEEeee
Confidence            6   66666666    999999876654221  223477899999999999987643

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.62  E-value=1.7e-14  Score=107.13  Aligned_cols=116  Identities=25%  Similarity=0.282  Sum_probs=82.1

Q ss_pred             CceeEEeeeCCccccHHHHHhhh---CCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce---eccCcceeEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~h~  226 (291)
                      ++.||.|.|.|++++.+||+++|   ||++.....  + ...+...     ..+..+.+........   ...+++..|+
T Consensus         1 ~i~Hv~i~v~d~~~~~~Fy~~~l~~~G~~~~~~~~--~-~~~~~~~-----~~~~~i~l~~~~~~~~~~~~~~~~g~~hi   72 (128)
T cd07242           1 GIHHVELTVRDLERSRAFYDWLLGLLGFEEVKEWE--D-GRSWRAG-----DGGTYLVLQQADGESAGRHDRRNPGLHHL   72 (128)
T ss_pred             CCceEEEEeCCHHHHHHHHHHHHhhcCCEEEEeec--c-CceEEec-----CCceEEEEEecccCCCcccccCCcCeeEE
Confidence            47899999999999999999999   999776431  1 1122221     1245566654433221   1234578899


Q ss_pred             EEEecc---hhhhHHHHHHHHHHhCCeeecCCccc--CCCCceEEEEECCCCCeEEEEe
Q 022871          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +|.|+|   ++++.+++    +++|+++...+...  ...+.+.+|++||+|++|||+.
T Consensus        73 a~~v~~~~d~~~~~~~l----~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~  127 (128)
T cd07242          73 AFRAPSREAVDELYARL----AKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVA  127 (128)
T ss_pred             EEEcCCHHHHHHHHHHH----HHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEe
Confidence            999975   66777777    99999988877642  2224588999999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>PRK06724 hypothetical protein; Provisional

Probab=99.62  E-value=9e-15  Score=108.26  Aligned_cols=110  Identities=18%  Similarity=0.225  Sum_probs=73.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhh---CCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKAL---GMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~l---G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~  228 (291)
                      ..++||.|.|+|+++|.+||+++|   |++.........+              ...+.+.. .+.. .....+..|+||
T Consensus         6 ~~i~Hv~l~V~Dle~s~~FY~~vlg~lg~~~~~~~~~~~g--------------~~~l~l~~-~~~~-~~~~~g~~h~af   69 (128)
T PRK06724          6 AGIHHIEFWVANLEESISFYDMLFSIIGWRKLNEVAYSTG--------------ESEIYFKE-VDEE-IVRTLGPRHICY   69 (128)
T ss_pred             cccCEEEEEeCCHHHHHHHHHHHHhhCCcEEeeeEeeeCC--------------CeeEEEec-CCcc-ccCCCCceeEEE
Confidence            469999999999999999999977   5554311110011              11222211 1100 012346789999


Q ss_pred             Ee---cchhhhHHHHHHHHHHhCCeeecCCcccC--CCCceEEEEECCCCCeEEEEec
Q 022871          229 ST---DDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       229 ~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      .|   ++++++.+++    +++|+++..+|...+  ..+.+.+||+||||+.|||+..
T Consensus        70 ~v~~~~dvd~~~~~l----~~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         70 QAINRKVVDEVAEFL----SSTKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             ecCChHHHHHHHHHH----HHCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            98   5677777777    999999988886544  2334778999999999999865

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=99.62  E-value=2.7e-14  Score=121.98  Aligned_cols=122  Identities=18%  Similarity=0.267  Sum_probs=84.7

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCce-eeEEEecCCCCceeEEEeeccCCCCcccCCCC-ee
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY-SNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG-FG   94 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~   94 (291)
                      ..+.+++|+||+|.|+|++++.+||+++|||++..+...+++.. ...++..+.. .+ .+.+...       .+.| ++
T Consensus       139 ~~~~~~~i~Hi~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~-------~~~g~~~  209 (303)
T TIGR03211       139 RGVGARRLDHCLLYGEDVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNK-AH-DIAFVGD-------PEPGKLH  209 (303)
T ss_pred             CCcCceeEEEEeEEeCCHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCC-Cc-ccceecC-------CCCCceE
Confidence            33458999999999999999999999999999876644333322 2344443221 11 1111110       1234 89


Q ss_pred             EEEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           95 HFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        95 ~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+||.|+|   +++++++|+++|+++...|...+.+...++||+||+|+++|+...
T Consensus       210 Hiaf~v~~~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  265 (303)
T TIGR03211       210 HVSFFLDSWEDVLKAADVMSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFGG  265 (303)
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEecC
Confidence            99999986   555788999999998776654443333469999999999999843

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.61  E-value=6.5e-14  Score=104.87  Aligned_cols=119  Identities=25%  Similarity=0.431  Sum_probs=81.5

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCC
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d  102 (291)
                      +|+|+.|.|+|++++.+||+++|||++......  .  ...++..+. .....+.+.............++.|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            589999999999999999999999998765432  1  234554431 11223333322221111233478899999987


Q ss_pred             HH---HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          103 VY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       103 ~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ++   +++++|.++|+++...+. . ++. ..++++||+|+++||+...+
T Consensus        76 ~~~v~~~~~~l~~~G~~~~~~~~-~-~~~-~~~~~~DP~G~~ie~~~~~~  122 (134)
T cd08348          76 LDDLRDLYERLRAAGITPVWPVD-H-GNA-WSIYFRDPDGNRLELFVDTP  122 (134)
T ss_pred             HHHHHHHHHHHHHCCCCccccCC-C-Cce-eEEEEECCCCCEEEEEEcCC
Confidence            65   578999999998765432 2 223 35889999999999998764

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.61  E-value=1.5e-14  Score=105.91  Aligned_cols=112  Identities=19%  Similarity=0.185  Sum_probs=79.3

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc----eeccCcceeEEEEEec
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----EYTKGNAYAQVAISTD  231 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~~~~~~~~~h~~~~v~  231 (291)
                      +..|.|.|++++.+||+++|||++....    ..+.  .+..++.  ...+.+.......    .....+...|++|.|+
T Consensus         4 ~~~l~v~D~~~s~~FY~~~lG~~~~~~~----~~~~--~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~   75 (119)
T cd08359           4 YPVIVTDDLAETADFYVRHFGFTVVFDS----DWYV--SLRSPDG--GVELAFMLPGHETVPAAQYQFQGQGLILNFEVD   75 (119)
T ss_pred             eeEEEECCHHHHHHHHHHhhCcEEEecc----CcEE--EEecCCC--ceEEEEccCCCCCCcchhcccCCceEEEEEEEC
Confidence            5789999999999999999999976431    1122  2222111  2344443211110    0111223459999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      |++++.+++    .++|+++..+|...++ +.+.++++||+|++|||+|
T Consensus        76 did~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          76 DVDAEYERL----KAEGLPIVLPLRDEPW-GQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             CHHHHHHHH----HhcCCCeeeccccCCC-cceEEEEECCCCCEEEEEC
Confidence            999999999    9999998888887776 4689999999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.60  E-value=2.8e-14  Score=106.86  Aligned_cols=123  Identities=20%  Similarity=0.195  Sum_probs=80.9

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d  232 (291)
                      ++.|+.|.|+|++++.+||+++|||++......  .  .+.++..+. .....+.+............++..|++|.|+|
T Consensus         1 ~i~hv~l~v~D~~~s~~FY~~~lG~~~~~~~~~--~--~~~~~~~~~-~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~   75 (134)
T cd08348           1 RLSHVVLYVRDLEAMVRFYRDVLGFTVTDRGPL--G--GLVFLSRDP-DEHHQIALITGRPAAPPPGPAGLNHIAFEVDS   75 (134)
T ss_pred             CeeEEEEEecCHHHHHHHHHHhcCCEEEeeccC--C--cEEEEEecC-CCceEEEEEecCCCCCCCCCCCceEEEEEeCC
Confidence            478999999999999999999999997654321  1  223333221 12345555443222111233578899999998


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      +++.. .+++++.++|+++...+. .+  +++.+|++||+||+|||+...+.
T Consensus        76 ~~~v~-~~~~~l~~~G~~~~~~~~-~~--~~~~~~~~DP~G~~ie~~~~~~~  123 (134)
T cd08348          76 LDDLR-DLYERLRAAGITPVWPVD-HG--NAWSIYFRDPDGNRLELFVDTPW  123 (134)
T ss_pred             HHHHH-HHHHHHHHCCCCccccCC-CC--ceeEEEEECCCCCEEEEEEcCCC
Confidence            55422 223444999998776543 22  24889999999999999976553

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.60  E-value=2.5e-14  Score=102.85  Aligned_cols=108  Identities=23%  Similarity=0.295  Sum_probs=75.3

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHHHHH
Q 022871           29 YRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVE  108 (291)
Q Consensus        29 l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~~  108 (291)
                      |.|+|++++++||+++|||++....+.      ...+..+.....-...+....  .......+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDPD------YVDFSLGFRFHDGVIEFLQFP--DPPGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEETS------EEEEEETEEEEEEEEEEEEEE--SSSSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCCC------eEEEEeccchhhhhHHHccCC--ccccCCCceeEEEEEEcCHHHHHH
Confidence            689999999999999999999884331      233333211000011111111  112234578899999999999999


Q ss_pred             HHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          109 NIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       109 ~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      +++++|+++..+|...++|.. .+++.||+|++|+|+
T Consensus        73 ~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RLKELGAEIVTEPRDDPWGQR-SFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HHHHTTSEEEEEEEEETTSEE-EEEEE-TTS-EEEEE
T ss_pred             HHHHCCCeEeeCCEEcCCCeE-EEEEECCCCCEEEeC
Confidence            999999998888888777654 499999999999986

...

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=99.60  E-value=8.2e-14  Score=114.96  Aligned_cols=225  Identities=18%  Similarity=0.244  Sum_probs=141.5

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcc--cCCCCeeE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGH   95 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~   95 (291)
                      ++...++.+|.+.|+|.+.+..=|-..|||+...+-...    ....++.|  +..+++.-.+.+....+  ..|++++.
T Consensus        17 P~~~~GfeFvEf~~~d~~~~l~~l~~~lGF~~~~~Hrsk----~v~l~rQG--dinlvvn~~~~s~a~~f~~~Hgps~~a   90 (363)
T COG3185          17 PEGTDGFEFVEFAVPDPQEALGALLGQLGFTAVAKHRSK----AVTLYRQG--DINLVVNAEPDSFAAEFLDKHGPSACA   90 (363)
T ss_pred             CCCCCceeEEEEecCCHHHHHHHHHHHhCcccccccccc----ceeEEEeC--CEEEEEcCCCcchhhHHHHhcCCchhe
Confidence            345899999999999995444444455999987542211    12223323  44454443333323333  37889999


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEecCCc-----ccC----CCceEEEEEECCCC-C-E--EEEEeC---CC-C---CCCce
Q 022871           96 FAIATEDVYKLVENIRAKGGNVTREPG-----PLK----GGTTHIAFVKDPDG-Y-I--FELIQR---GP-T---PEPLC  155 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~-----~~~----~g~~~~~~~~dp~G-~-~--iel~~~---~~-~---~~~~~  155 (291)
                      ++|.|+|...++++..+.|++....+.     ..+    -|.. .+||.|..| . +  .++...   .. .   ...++
T Consensus        91 ~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggs-llyfvd~~~~~siyd~~f~~~~~~~~~~~~g~~~ID  169 (363)
T COG3185          91 MAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGS-LLYFVDRYGGRSIYDVEFEPNGAQGASGGVGLTAID  169 (363)
T ss_pred             eEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCc-EEEEeccCCCCcccccccccccccccccccCceeec
Confidence            999999999999999999996433221     111    1222 477777763 1 1  111111   01 1   23689


Q ss_pred             eEEeee--CCccccHHHHHhhhCCeeeeeeccCCcceeEEEec-ccCCCceeEEEeeeecCcce---------eccCcce
Q 022871          156 QVMLRV--GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLG-YAEEDQTTVLELTYNYGVTE---------YTKGNAY  223 (291)
Q Consensus       156 hv~l~v--~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~l~~~~~~~~---------~~~~~~~  223 (291)
                      |++.+|  ..++....||+++|||+.....+.++.. +.+..+ ..+.++.  +.|.-+.+...         ...|.|+
T Consensus       170 Hl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~-tgl~Sram~Sp~G~--vrlplN~s~~~~sqi~efl~~y~G~GI  246 (363)
T COG3185         170 HLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPI-TGLRSRAMVSPCGK--VRLPLNESADDKSQIGEFLREYRGEGI  246 (363)
T ss_pred             hhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCc-ccEEEeeEecCCCc--EEeecccCCCchhHHHHHHHHhCCCcc
Confidence            999888  5799999999999999987665544321 111111 0111122  33333322221         2366799


Q ss_pred             eEEEEEecchhhhHHHHHHHHHHhCCeeecCCc
Q 022871          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       224 ~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      +||+|.++||-++++++    +++|+++...|.
T Consensus       247 QHIA~~T~dI~~tv~~l----r~rG~~fl~ip~  275 (363)
T COG3185         247 QHIAFGTDDIYATVAAL----RERGVKFLPIPE  275 (363)
T ss_pred             eEEEecccHHHHHHHHH----HHcCCccCCCch
Confidence            99999999999999999    999999988773

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.60  E-value=2.5e-14  Score=104.33  Aligned_cols=112  Identities=23%  Similarity=0.300  Sum_probs=80.7

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++|||++.....    ...  ++..+. ..+..+.+...       ...+..|++|.|+
T Consensus         1 ~~l~hv~l~v~d~~~~~~FY~~~lg~~~~~~~~----~~~--~~~~~~-~~~~~~~~~~~-------~~~~~~h~~~~v~   66 (117)
T cd07240           1 RRIAYAELEVPDLERALEFYTDVLGLTVLDRDA----GSV--YLRCSE-DDHHSLVLTEG-------DEPGVDALGFEVA   66 (117)
T ss_pred             CceeEEEEecCCHHHHHHHHHhccCcEEEeecC----CeE--EEecCC-CCcEEEEEEeC-------CCCCceeEEEEcC
Confidence            468999999999999999999999999775431    122  233221 12334444321       1246789999998


Q ss_pred             c---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 D---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +   +++..+++    +++|+++...|...++ +++.+|+.||+|++||++...
T Consensus        67 ~~~~v~~~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~DP~G~~ie~~~~~  115 (117)
T cd07240          67 SEEDLEALAAHL----EAAGVAPEEASDPEPG-VGRGLRFQDPDGHLLELFVEA  115 (117)
T ss_pred             CHHHHHHHHHHH----HHcCCceEEcCccCCC-CceEEEEECCCCCEEEEEEcc
Confidence            4   56666666    9999999888765555 358899999999999998653

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=3.4e-14  Score=105.00  Aligned_cols=117  Identities=22%  Similarity=0.313  Sum_probs=80.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc-ceeccCcceeEEEEEe
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~h~~~~v  230 (291)
                      +++.|+.|.|+|++++.+||+++|||++....   +   ....+..++  ....+.+...... .......+..|++|.|
T Consensus         1 ~~i~hi~l~v~d~~~~~~Fy~~~lG~~~~~~~---~---~~~~l~~~~--~~~~l~l~~~~~~~~~~~~~~~~~hi~f~v   72 (125)
T cd07255           1 TRIGAVTLRVADLERSLAFYQDVLGLEVLERT---D---STAVLGTGG--KRPLLVLEEDPDAPPAPPGATGLYHFAILL   72 (125)
T ss_pred             CEEEEEEEEECCHHHHHHHHHhccCcEEEEcC---C---CEEEEecCC--CeEEEEEEeCCCCCcccCCCCcEEEEEEEC
Confidence            36899999999999999999999999987542   1   123333222  2345555443221 1112335788999999


Q ss_pred             cc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      .+   ++++++++    +++|+++.. +...++  .+.+|+.||+||+|||....+
T Consensus        73 ~~~~~v~~~~~~l----~~~g~~~~~-~~~~~~--~~~~~~~DPdG~~iEi~~~~~  121 (125)
T cd07255          73 PSRADLAAALRRL----IELGIPLVG-ASDHLV--SEALYLSDPEGNGIEIYADRP  121 (125)
T ss_pred             CCHHHHHHHHHHH----HHcCCceec-cccccc--eeEEEEECCCCCEEEEEEecC
Confidence            85   55556666    999998744 333333  378999999999999987654

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.60  E-value=2.5e-14  Score=103.67  Aligned_cols=109  Identities=20%  Similarity=0.227  Sum_probs=78.9

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      ...|.|+|++++.+||+++|||++...    .+  ....+...+ ..+..+.+.....     .++...|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~----~~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMD----HG--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEc----CC--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            346899999999999999999997532    11  122222211 1234444432211     12345799999999999


Q ss_pred             hHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +.+++    ++.|+++..+|...++ +.+.+|+.||+||+|+|+++
T Consensus        71 ~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARA----VAAGFAIVYGPTDEPW-GVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHH----HhcCCeEecCCccCCC-ceEEEEEECCCCCEEEEEEc
Confidence            99999    9999999888877776 45889999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.60  E-value=1.4e-14  Score=104.15  Aligned_cols=108  Identities=26%  Similarity=0.330  Sum_probs=75.8

Q ss_pred             eeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHH
Q 022871          159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~  238 (291)
                      |.|+|++++.+||+++|||++.....    .+..+...  .........+......  .....+..|++|.|+|++++++
T Consensus         1 l~v~d~~~a~~FY~~~lg~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~dv~~~~~   72 (108)
T PF12681_consen    1 LPVSDLEAAAAFYEDVLGFEVVFDDP----DYVDFSLG--FRFHDGVIEFLQFPDP--PGPPGGGFHLCFEVEDVDALYE   72 (108)
T ss_dssp             EEESSHHHHHHHHHHTTTSEEEEEET----SEEEEEET--EEEEEEEEEEEEEESS--SSSSSSEEEEEEEESHHHHHHH
T ss_pred             CccCCHHHHHHHHHHhcCCEEEEeCC----CeEEEEec--cchhhhhHHHccCCcc--ccCCCceeEEEEEEcCHHHHHH
Confidence            68999999999999999999876321    12233222  1000112222221111  1234578899999999999999


Q ss_pred             HHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      ++    +++|++++.+|...++ +.+.+++.||+|++|||+
T Consensus        73 ~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   73 RL----KELGAEIVTEPRDDPW-GQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             HH----HHTTSEEEEEEEEETT-SEEEEEEE-TTS-EEEEE
T ss_pred             HH----HHCCCeEeeCCEEcCC-CeEEEEEECCCCCEEEeC
Confidence            99    9999999999888777 469999999999999986

...

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.59  E-value=3.7e-14  Score=102.83  Aligned_cols=109  Identities=23%  Similarity=0.405  Sum_probs=75.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe--CCH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT--EDV  103 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v--~d~  103 (291)
                      |+.|.|+|++++.+||+++|||++..+.+.      ..++..+.    ..+.+.......  ..+.+..|++|.|  +|+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~~------~~~~~~~~----~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSSK------EAYFELAG----LWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccCc------eeEEEecC----eEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            899999999999999999999998765421      23344332    122232221111  1234678999999  479


Q ss_pred             HHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +++++++.++|+++...+.....+. ..++++||+|+++|++..
T Consensus        69 ~~~~~~l~~~G~~~~~~~~~~~~~~-~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERLKALGVEMKPERPRVQGEG-RSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHHHHcCCccCCCccccCCCc-eEEEEECCCCCEEEEEeC
Confidence            9999999999999765433222233 358999999999999864

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.59  E-value=2.9e-14  Score=104.85  Aligned_cols=109  Identities=28%  Similarity=0.463  Sum_probs=78.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe--
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT--  100 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v--  100 (291)
                      +|+|+.|.|+|++++.+||+++|||++....+  +    ..++..+.  ..+.+......     ....+..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~----~~~~~~~~--~~~~l~~~~~~-----~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K----GAYLEAGD--LWLCLSVDANV-----GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C----ceEEecCC--EEEEEecCCCC-----CCCCCeeeEEEEeCH
Confidence            57899999999999999999999999866532  1    23444332  22222221111     1234678999998  


Q ss_pred             CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|+++++++|+++|+++...+..  .+  ..++|+||+|+++||+...
T Consensus        68 ~dl~~~~~~l~~~G~~~~~~~~~--~~--~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          68 EDFASLKEKLRQAGVKEWKENTS--EG--DSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HHHHHHHHHHHHcCCcccCCCCC--Cc--cEEEEECCCCCEEEEEeCC
Confidence            57999999999999987654332  12  2589999999999999764

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.59  E-value=3.3e-14  Score=102.83  Aligned_cols=109  Identities=25%  Similarity=0.273  Sum_probs=78.7

Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhH
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~  237 (291)
                      .|.|+|++++.+||+++|||++.....  +.  .+..+..+    ...+.+....+... ...++..|++|.++|++++.
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~----~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG----GAQLMLSEHDGDEP-VPLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC----CEEEEEeccCCCCC-CCCCCcEEEEEEeCCHHHHH
Confidence            589999999999999999999765432  12  22333321    34455544332211 12346679999999999999


Q ss_pred             HHHHHHHHHhCCe-eecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          238 EVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       238 ~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +++    ++.|++ +..++...++ +.+.++++||+|+.|||+|
T Consensus        74 ~~l----~~~G~~~~~~~~~~~~~-g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AEL----KAKGADLIVYPPEDQPW-GMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHH----HHcCCcceecCccCCCc-ccEEEEEECCCCCEEEecC
Confidence            999    999998 5666666555 3588999999999999986

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.58  E-value=8.9e-14  Score=118.29  Aligned_cols=121  Identities=25%  Similarity=0.369  Sum_probs=84.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..+++|+|++|.|+|++++.+||+++|||++..+...+.+.....++..+. ..+ .+.+..       ..+++++|+||
T Consensus       132 ~~~~~i~Hv~l~v~dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~-------~~~~~~~Hiaf  202 (294)
T TIGR02295       132 VSPVRLDHFNVFVPDVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKG-GVH-DIALTN-------GNGPRLHHIAY  202 (294)
T ss_pred             ccceeeeeEEEEeCCHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCC-CcC-ceEeec-------CCCCceeeEEE
Confidence            458999999999999999999999999999876643333333334443222 111 122211       12358999999


Q ss_pred             EeCC---HHHHHHHHHHcCCe--EecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATED---VYKLVENIRAKGGN--VTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~--~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|++  +...|.....+...++|++||+|++||+....
T Consensus       203 ~v~d~~~v~~~~~~l~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       203 WVHDPLNIIKACDILASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             EcCCHHHHHHHHHHHHhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            9998   45568999999987  54444433333344689999999999998764

The enzyme from Bacillus brevis contains manganese.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.58  E-value=3e-14  Score=104.48  Aligned_cols=112  Identities=28%  Similarity=0.380  Sum_probs=78.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||+++|||+......    .+.+  +...+ ...+.+.+..       ...++..|++|.|.
T Consensus         2 ~~i~hv~l~v~d~~~s~~FY~~~lG~~~~~~~~----~~~~--~~~~~-~~~~~~~~~~-------~~~~~~~~~~~~v~   67 (120)
T cd08362           2 TALRGVGLGVPDLAAAAAFYREVWGLSVVAEDD----GIVY--LRATG-SEHHILRLRR-------SDRNRLDVVSFSVA   67 (120)
T ss_pred             ceeeEEEEecCCHHHHHHHHHhCcCcEEEEecC----CEEE--EECCC-CccEEEEecc-------CCCCCCceEEEEeC
Confidence            368999999999999999999999999764321    2333  22112 1223333321       11246789999995


Q ss_pred             ---chhhhHHHHHHHHHHhCCeeecCCcc--cCCCCceEEEEECCCCCeEEEEech
Q 022871          232 ---DVYKSAEVVNLVTQELGGKITRQPGS--IPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 ---di~~~~~~l~~~~~~~G~~~~~~p~~--~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                         ++++.++++    +++|+++..+|..  .++ +++.++++||+||+|||+...
T Consensus        68 ~~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~-~~~~~~~~DP~G~~iel~~~~  118 (120)
T cd08362          68 SRADVDALARQV----AARGGTVLSEPGATDDPG-GGYGFRFFDPDGRLIEFSADV  118 (120)
T ss_pred             CHHHHHHHHHHH----HHcCCceecCCcccCCCC-CceEEEEECCCCCEEEEEecc
Confidence               566666666    9999998877643  333 468899999999999998754

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.58  E-value=4.1e-14  Score=102.72  Aligned_cols=109  Identities=17%  Similarity=0.240  Sum_probs=76.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|+.|.|+|++++.+||++ |||++....   +.  .++ +...+. ....+.+..       ...+++.|++|.|+
T Consensus         2 ~~l~hv~l~v~Dl~~s~~FY~~-lGl~~~~~~---~~--~~~-~~~~~~-~~~~~~~~~-------~~~~~~~~~af~v~   66 (113)
T cd07267           2 TDIAHVRFEHPDLDKAERFLTD-FGLEVAART---DD--ELY-YRGYGT-DPFVYVARK-------GEKARFVGAAFEAA   66 (113)
T ss_pred             cEEEEEEEccCCHHHHHHHHHH-cCCEEEEec---CC--eEE-EecCCC-ccEEEEccc-------CCcCcccEEEEEEC
Confidence            4689999999999999999999 999876442   11  222 332111 122222111       11247789999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |.+++.+.+    ++.|.++...+. .++ +++.+||.||+||.|||+..
T Consensus        67 ~~~~~~~~~----~~~g~~~~~~~~-~~~-~~~~~~~~DPdG~~iEl~~~  110 (113)
T cd07267          67 SRADLEKAA----ALPGASVIDDLE-APG-GGKRVTLTDPDGFPVELVYG  110 (113)
T ss_pred             CHHHHHHHH----HcCCCeeecCCC-CCC-CceEEEEECCCCCEEEEEec
Confidence            998888888    888998765443 344 35899999999999999764

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.58  E-value=2.5e-14  Score=103.72  Aligned_cols=109  Identities=23%  Similarity=0.352  Sum_probs=73.5

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec--ch
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DV  233 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~--di  233 (291)
                      ||.|.|+|++++.+||+++|||+......  .  ...+.+.      ...+.+.......  ..+.+..|++|.|+  |+
T Consensus         1 Hv~l~v~d~~~s~~Fy~~~lg~~~~~~~~--~--~~~~~~~------~~~l~~~~~~~~~--~~~~~~~hiaf~v~~~d~   68 (113)
T cd08345           1 HITLIVKDLNKSIAFYRDILGAELIYSSS--K--EAYFELA------GLWICLMEEDSLQ--GPERTYTHIAFQIQSEEF   68 (113)
T ss_pred             CeeEEECCHHHHHHHHHHhcCCeeeeccC--c--eeEEEec------CeEEEeccCCCcC--CCCCCccEEEEEcCHHHH
Confidence            78999999999999999999999764431  1  1122221      2344443222111  12346789999995  56


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +++++++    .++|+++...+...++ +++.+|++||+|++|||+..
T Consensus        69 ~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEi~~~  111 (113)
T cd08345          69 DEYTERL----KALGVEMKPERPRVQG-EGRSIYFYDPDGHLLELHAG  111 (113)
T ss_pred             HHHHHHH----HHcCCccCCCccccCC-CceEEEEECCCCCEEEEEeC
Confidence            6666666    9999997644333333 35899999999999999854

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=1.1e-13  Score=100.25  Aligned_cols=109  Identities=20%  Similarity=0.260  Sum_probs=78.1

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      +..|.|+|++++.+||+++|||++....    +  ...++..++ .....+.+.....     .+....|++|.|+|+++
T Consensus         3 ~~~l~v~Dl~~s~~FY~~~lG~~~~~~~----~--~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~~i~~~v~d~~~   70 (112)
T cd07238           3 VPNLPVADPEAAAAFYADVLGLDVVMDH----G--WIATFASPQ-NMTVQVSLATEGG-----TATVVPDLSIEVDDVDA   70 (112)
T ss_pred             cceEecCCHHHHHHHHHHhcCceEEEcC----C--ceEEEeecC-CCCcEEEEecCCC-----CCCCCCEEEEEeCCHHH
Confidence            4578999999999999999999986431    1  123333222 1123333332211     12245699999999999


Q ss_pred             HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          106 LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++++|+++|+++...+...++|.. .+++.||+|++|+|+++
T Consensus        71 ~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          71 ALARAVAAGFAIVYGPTDEPWGVR-RFFVRDPFGKLVNILTH  111 (112)
T ss_pred             HHHHHHhcCCeEecCCccCCCceE-EEEEECCCCCEEEEEEc
Confidence            999999999998887776666654 48899999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=9.6e-14  Score=102.31  Aligned_cols=114  Identities=25%  Similarity=0.292  Sum_probs=77.1

Q ss_pred             eeEEEEEeCCHHHHHHHHHHh---cCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           24 FLHAVYRVGDLDRTIKFYTEC---FGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~---LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +.|+.|.|+|++++++||+++   ||++...+..   +.  ...+..+.....  +.+..+....+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~~---~~--~~~~~~~~~~~~--~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMEDG---PG--AVGYGKGGGGPD--FWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeecC---Cc--eeEeccCCCCce--EEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999998   6999875531   11  222332212222  333322211111 222457999999


Q ss_pred             CC---HHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEE
Q 022871          101 ED---VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~d---~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~  145 (291)
                      +|   ++++++++.++|+.+...|...++  .....+||+||+|+.|||+
T Consensus        73 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            86   788999999999998877665543  2333488999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.58  E-value=1.1e-13  Score=101.81  Aligned_cols=113  Identities=28%  Similarity=0.446  Sum_probs=78.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC------CcccCCCCeeEEE
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV------TSYDIGTGFGHFA   97 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~g~~~i~   97 (291)
                      +.|+.|.|+|++++++||+++|||++..+.   .+  ..+++..++. ..  +.+......      .......++.|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~~---~~--~~~~l~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLKE---DR--RLAFFWVGGR-GM--LLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeecC---CC--ceEEEEcCCC-cE--EEEEecCCcccccCCCCCCCCCCccEEE
Confidence            468999999999999999999999987641   12  1355555443 22  222211110      0111234788999


Q ss_pred             EEe--CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           98 IAT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      |.+  +|++++++++.++|+++...+. ..++.. .++|+||+|+++|+++
T Consensus        73 ~~v~~~dl~~~~~~l~~~g~~~~~~~~-~~~~~~-~~~~~DP~G~~ie~~~  121 (122)
T cd08354          73 FAIPAEELAEWEAHLEAKGVAIESEVQ-WPRGGR-SLYFRDPDGNLLELAT  121 (122)
T ss_pred             EEcCHHHHHHHHHHHHhcCCceecccc-CCCCee-EEEEECCCCCEEEEec
Confidence            998  5899999999999998876544 233444 4899999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.56  E-value=7.2e-14  Score=102.74  Aligned_cols=110  Identities=29%  Similarity=0.332  Sum_probs=75.7

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe--
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v--  230 (291)
                      .+.|+.|.|+|++++.+||+++|||++.....  +  ...  +..+    ...+.+......   ...++..|++|.+  
T Consensus         1 ~i~hv~l~v~d~~~~~~FY~~vLG~~~~~~~~--~--~~~--~~~~----~~~~~l~~~~~~---~~~~~~~hi~f~v~~   67 (121)
T cd07244           1 GINHITLAVSDLERSVAFYVDLLGFKLHVRWD--K--GAY--LEAG----DLWLCLSVDANV---GPAKDYTHYAFSVSE   67 (121)
T ss_pred             CcceEEEEECCHHHHHHHHHHhcCCEEEEecC--C--ceE--EecC----CEEEEEecCCCC---CCCCCeeeEEEEeCH
Confidence            47899999999999999999999999754321  1  111  2221    122333221111   1235678999998  


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +|++++++++    +++|+++..++.. +   ++.+||.||||++|||+..+.
T Consensus        68 ~dl~~~~~~l----~~~G~~~~~~~~~-~---~~~~~f~DPdG~~ie~~~~~~  112 (121)
T cd07244          68 EDFASLKEKL----RQAGVKEWKENTS-E---GDSFYFLDPDGHKLELHVGSL  112 (121)
T ss_pred             HHHHHHHHHH----HHcCCcccCCCCC-C---ccEEEEECCCCCEEEEEeCCH
Confidence            4567777777    9999997655432 2   378999999999999997654

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=6.2e-14  Score=101.88  Aligned_cols=108  Identities=26%  Similarity=0.275  Sum_probs=75.5

Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEEEecc---
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDD---  232 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~~v~d---  232 (291)
                      +.|.|+|++++.+||+++|||++....    ..+..+...  +   ...+.+........ ....++..|++|.+++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~----~~~~~~~~~--~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELS----PTFALFVLG--S---GVKLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCC----CceEEEEeC--C---CcEEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            578999999999999999999965431    123333222  1   23444543322111 1123467899999986   


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      ++++++++    +++|+++..+|...++  ++.++|+||+||+|||+
T Consensus        73 ~~~~~~~~----~~~g~~v~~~~~~~~~--g~~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEW----QAKGVKIIQEPTEMDF--GYTFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHH----HHCCCeEecCccccCC--ccEEEEECCCCCEEEee
Confidence            55666666    9999999988877766  37899999999999997

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.56  E-value=1.8e-13  Score=99.12  Aligned_cols=108  Identities=19%  Similarity=0.326  Sum_probs=73.3

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE--EEE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF--AIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i--~~~   99 (291)
                      ++|+|+.|.|+|++++.+||+ .|||++..+.+      ...+...+..  ...+.+....       ..++.|+  .+.
T Consensus         1 ~~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~-------~~~~~~~~~~~~   64 (112)
T cd08344           1 HSIDHFALEVPDLEVARRFYE-AFGLDVREEGD------GLELRTAGND--HRWARLLEGA-------RKRLAYLSFGIF   64 (112)
T ss_pred             CceeEEEEecCCHHHHHHHHH-HhCCcEEeecC------ceEEEecCCC--ceEEEeecCC-------CCceeeEEEEeE
Confidence            478999999999999999997 69999865421      1222222222  2223332211       1234444  455


Q ss_pred             eCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++|+++++++|+++|+++...+  .+++.. .++|.||+||.|||....
T Consensus        65 ~~d~~~~~~~l~~~Gi~~~~~~--~~~~~~-~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          65 EDDFAAFARHLEAAGVALAAAP--PGADPD-GVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             hhhHHHHHHHHHHcCCceecCC--CcCCCC-EEEEECCCCCEEEEecCC
Confidence            6899999999999999987654  223333 388999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.56  E-value=8.8e-14  Score=102.52  Aligned_cols=114  Identities=24%  Similarity=0.241  Sum_probs=75.7

Q ss_pred             ceeEEeeeCCccccHHHHHhh---hCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          154 LCQVMLRVGDLGRSIKFYEKA---LGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~---lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      +.|+.|.|+|++++.+||+++   ||++.....  .+  ..+. +....  ....+.+....+..+. ...+..|++|.|
T Consensus         1 l~hv~l~v~d~~~s~~FY~~~f~~lg~~~~~~~--~~--~~~~-~~~~~--~~~~~~l~~~~~~~~~-~~~~~~hi~f~v   72 (123)
T cd07262           1 IDHVTLGVNDLERARAFYDAVLAPLGIKRVMED--GP--GAVG-YGKGG--GGPDFWVTKPFDGEPA-TAGNGTHVAFAA   72 (123)
T ss_pred             CcEEEEecCcHHHHHHHHHHHHhhcCceEEeec--CC--ceeE-eccCC--CCceEEEeccccCCCC-CCCCceEEEEEC
Confidence            579999999999999999999   588865432  11  1222 22211  2344555443222111 223457999999


Q ss_pred             cc---hhhhHHHHHHHHHHhCCeeecCCcccCC--CCceEEEEECCCCCeEEEE
Q 022871          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~Dp~G~~iel~  279 (291)
                      +|   ++++++++    .++|+++..+|...++  .+.+.+|++||+|+.|||+
T Consensus        73 ~~~~~v~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~  122 (123)
T cd07262          73 PSREAVDAFHAAA----LAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAV  122 (123)
T ss_pred             CCHHHHHHHHHHH----HHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEe
Confidence            87   44455555    9999998888766553  2335789999999999996

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.55  E-value=1.1e-13  Score=101.83  Aligned_cols=115  Identities=20%  Similarity=0.234  Sum_probs=75.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeecc---CCCCcccCCCCeeEEEEEe
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN---YGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~g~~~i~~~v  100 (291)
                      ++||+|.|+|++++++||++ |||++......    ...+.+..++ ...+.+.....   ........+.+..+++|.+
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~----~~~~~~~~~~-~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~   74 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD----EPHVEAVLPG-GVRLAWDTVESIRSFTPGWTPTGGHRIALAFLC   74 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC----CCcEEEEeCC-CEEEEEEcccceeeecCCCCCCCCCcEEEEEEc
Confidence            57999999999999999975 99997543221    1123333321 12222211000   0000011223456788876


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      .   |+++++++|+++|+++..+|.+.++|.+ .++++||+||+|+|.
T Consensus        75 ~~~~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  121 (122)
T cd07235          75 ETPAEVDALYAELVGAGYPGHKEPWDAPWGQR-YAIVKDPDGNLVDLF  121 (122)
T ss_pred             CCHHHHHHHHHHHHHCCCCcCCCCccCCCCCE-EEEEECCCCCEEEEe
Confidence            4   8999999999999998888777777765 488999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=2.7e-13  Score=99.48  Aligned_cols=112  Identities=24%  Similarity=0.398  Sum_probs=77.3

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCC--
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED--  102 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d--  102 (291)
                      -|+.|.|+|++++.+||+++||++...+.+  .   ...+ ..++..  +.+.+..+...    ...++.|++|.|++  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~~--~---~~~~-~~~~~~--~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVRD--D---YAKF-LLEDPR--LNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEecccC--C---eeEE-EecCCc--eEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            599999999999999999999998765532  1   1222 222222  22333222111    11478899999987  


Q ss_pred             -HHHHHHHHHHcCCeEecCCcccCC-CceEEEEEECCCCCEEEEEeCC
Q 022871          103 -VYKLVENIRAKGGNVTREPGPLKG-GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       103 -~~~~~~~l~~~G~~~~~~~~~~~~-g~~~~~~~~dp~G~~iel~~~~  148 (291)
                       +++++++|.++|+++...+....+ +....++++||+|++|||+...
T Consensus        71 dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARAEAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHHHHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             788999999999998766543321 1223588999999999999754

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.55  E-value=2.3e-13  Score=97.67  Aligned_cols=112  Identities=31%  Similarity=0.449  Sum_probs=80.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      |+.|.|+|++++.+||+++|||+.......  ......++..+  .  ..+.+...........+.+..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~--~~~~~~~~~~~--~--~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGN--GGAEFAVLGLG--G--TRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeecc--CCEEEEEEecC--C--ceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            899999999999999999999998877542  11234445443  2  23444433222111345578999999999999


Q ss_pred             HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEE
Q 022871          106 LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       106 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      ++++|.++|+.+...+....++.. .+++.||+|+.++|
T Consensus        75 ~~~~l~~~g~~~~~~~~~~~~~~~-~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERLKAAGVEVLGEPREEPWGGR-VAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHHHHcCCcccCCCcCCCCCcE-EEEEECCCCcEEeC
Confidence            999999999998876653333344 48999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.55  E-value=1e-13  Score=101.74  Aligned_cols=108  Identities=19%  Similarity=0.158  Sum_probs=75.6

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      ...|.|+|++++++||++ |||++......   .  +..+..+    +..+.+.......   ......|++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~---~--~~~~~~~----~~~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA---G--YMILRRG----DLELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC---C--EEEEEcC----CEEEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            457899999999999999 99997654321   2  2333322    2355554422111   12234689999999999


Q ss_pred             hHHHHHHHHHHhCCeee-------cCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          236 SAEVVNLVTQELGGKIT-------RQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~-------~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +++++    +++|+++.       .+|...++ +.+.++++|||||+|||.|.
T Consensus        72 ~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEF----RAAGLPETGSGIPRITPPEDQPW-GMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHH----HHhCccccccCCCcccCCcCCCC-ceeEEEEECCCCCEEEeecC
Confidence            99999    99999742       33444445 46899999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.55  E-value=1.4e-13  Score=100.99  Aligned_cols=112  Identities=21%  Similarity=0.250  Sum_probs=75.9

Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc--
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD--  232 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d--  232 (291)
                      .|+.|.|+|++++.+||+++||++.....   +. +..+...  .  ....+.+..+...    ..++..|++|.|+|  
T Consensus         3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~~---~~-~~~~~~~--~--~~~~~~~~~~~~~----~~~~~~h~~f~v~~~~   70 (120)
T cd07254           3 FHVALNVDDLEASIAFYSKLFGVEPTKVR---DD-YAKFLLE--D--PRLNFVLNERPGA----PGGGLNHLGVQVDSAE   70 (120)
T ss_pred             EEEEEEeCCHHHHHHHHHHHhCCeEeccc---CC-eeEEEec--C--CceEEEEecCCCC----CCCCeeEEEEEeCCHH
Confidence            59999999999999999999999865432   11 2222222  1  1233333221111    11478899999988  


Q ss_pred             -hhhhHHHHHHHHHHhCCeeecCCcccC-CCCceEEEEECCCCCeEEEEech
Q 022871          233 -VYKSAEVVNLVTQELGGKITRQPGSIP-GLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 -i~~~~~~l~~~~~~~G~~~~~~p~~~~-~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                       +++..+++    .++|+++...|.... +..++.+|++||+|++|||+++.
T Consensus        71 dl~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          71 EVAEAKARA----EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHHHHHHHH----HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence             45555555    999999887765433 22247899999999999999854

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.1e-13  Score=101.73  Aligned_cols=114  Identities=21%  Similarity=0.260  Sum_probs=76.7

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc------eeccCcceeEEE
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT------EYTKGNAYAQVA  227 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~------~~~~~~~~~h~~  227 (291)
                      +.+|.|.|.|++++.+||+++|||++...   .++.+  .++..++.   ..+.+.......      ......+..|++
T Consensus         1 ~~~~~l~v~d~~~s~~Fy~~~lG~~~~~~---~~~~~--~~l~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   72 (122)
T cd08354           1 ILETALYVDDLEAAEAFYEDVLGLELMLK---EDRRL--AFFWVGGR---GMLLLFDPGATSTPGGEIPPHGGSGPGHFA   72 (122)
T ss_pred             CeEEEEEeCCHHHHHHHHHhccCCEEeec---CCCce--EEEEcCCC---cEEEEEecCCcccccCCCCCCCCCCccEEE
Confidence            46899999999999999999999997753   12222  23332222   233332221110      111234678999


Q ss_pred             EEec--chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          228 ISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |.++  |++++++++    .++|+++...+. ..+ +++.+|++||+|++|||++.
T Consensus        73 ~~v~~~dl~~~~~~l----~~~g~~~~~~~~-~~~-~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          73 FAIPAEELAEWEAHL----EAKGVAIESEVQ-WPR-GGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             EEcCHHHHHHHHHHH----HhcCCceecccc-CCC-CeeEEEEECCCCCEEEEecC
Confidence            9984  677777777    999999866554 233 35889999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.54  E-value=9e-14  Score=100.19  Aligned_cols=95  Identities=25%  Similarity=0.304  Sum_probs=74.8

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcc--cCCCCeeEEEEEeCC
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFGHFAIATED  102 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~i~~~v~d  102 (291)
                      +||+|.|+|++++++||+++||++.......+.......++..+++.  ..+++..+....++  ..+.|++||||.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~--~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGP--VQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTET--EEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCc--EEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            69999999999999999999999988776666666777777766533  45565554333222  267799999999999


Q ss_pred             HHHHHHHHHHcCCeEecCC
Q 022871          103 VYKLVENIRAKGGNVTREP  121 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~  121 (291)
                      ++++.++|+++|+++...+
T Consensus        79 ~d~~~~~l~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARLEAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHHHHTTECEEECE
T ss_pred             HHHHHHHHHHCCCEEcccC
Confidence            9999999999999987653

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=8e-14  Score=102.94  Aligned_cols=112  Identities=23%  Similarity=0.215  Sum_probs=74.4

Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc------ce-eccCcceeEEE
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV------TE-YTKGNAYAQVA  227 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~-~~~~~~~~h~~  227 (291)
                      .+++|.|.|++++++||++ |||++........  ...+...  +   ...+.+......      .. .+.+.+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~--~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK--AACMVIS--D---NIFVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC--eEEEEEC--C---ceEEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            5899999999999999976 9998653222211  2222221  1   234444322100      00 01234567999


Q ss_pred             EEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      |.|++   ++++++++    +++|+++..+|...++  ++.+|++|||||+|||+-
T Consensus        74 f~v~~~~~vd~~~~~l----~~~G~~i~~~p~~~~~--~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKA----LAAGGKEFREPQDHGF--MYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHH----HHCCCcccCCcccCCc--eEEEEEECCCCCEEEEEE
Confidence            99985   56666666    9999999888877665  477899999999999973

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.54  E-value=1.9e-13  Score=100.88  Aligned_cols=113  Identities=26%  Similarity=0.353  Sum_probs=72.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC-C---CCc-ccCCCCeeEEE--E
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-G---VTS-YDIGTGFGHFA--I   98 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~-~~~~~g~~~i~--~   98 (291)
                      ||+|.|+|++++++||+++|||++.....      ....+..++  ..+.+.+.... .   ... .....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            99999999999999999999999865421      112222222  12222222111 0   000 01122445664  5


Q ss_pred             EeCCHHHHHHHHHHcCCeEecCCcccCC---CceEEEEEECCCCCEEEEEe
Q 022871           99 ATEDVYKLVENIRAKGGNVTREPGPLKG---GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~---g~~~~~~~~dp~G~~iel~~  146 (291)
                      .++|+++++++|+++|+++..+|.....   +....++|+|||||+|||..
T Consensus        74 ~~~dv~~~~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            6789999999999999998876653221   22345899999999999874

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.54  E-value=9.5e-14  Score=102.18  Aligned_cols=113  Identities=19%  Similarity=0.174  Sum_probs=74.3

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec-----CcceeccCcceeEEEE
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-----GVTEYTKGNAYAQVAI  228 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-----~~~~~~~~~~~~h~~~  228 (291)
                      +.||+|.|+|++++++||++ |||++......  ..+..  +..+.   ...+.+....     .+.....+++..|++|
T Consensus         1 ~~~i~l~V~D~~~a~~FY~~-LGf~~~~~~~~--~~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~   72 (122)
T cd07235           1 LDAVGIVVADMAKSLDFYRR-LGFDFPEEADD--EPHVE--AVLPG---GVRLAWDTVESIRSFTPGWTPTGGHRIALAF   72 (122)
T ss_pred             CceEEEEeccHHHHHHHHHH-hCceecCCcCC--CCcEE--EEeCC---CEEEEEEcccceeeecCCCCCCCCCcEEEEE
Confidence            57999999999999999975 99986532211  11111  12111   1222221110     0000012235568888


Q ss_pred             Eec---chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          229 STD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       229 ~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      .+.   |++++++++    +++|+++..+|...++ +.+.++++||+||.|||+
T Consensus        73 ~~~~~~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          73 LCETPAEVDALYAEL----VGAGYPGHKEPWDAPW-GQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             EcCCHHHHHHHHHHH----HHCCCCcCCCCccCCC-CCEEEEEECCCCCEEEEe
Confidence            875   688888888    9999999888887777 458899999999999996

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.54  E-value=3.1e-13  Score=97.70  Aligned_cols=109  Identities=28%  Similarity=0.412  Sum_probs=77.3

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHHHH
Q 022871           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++++||+++|||++.....  ..  ...++..+  ...  +.+......... ...+..|++|.++|+++++
T Consensus         3 ~i~v~d~~~s~~FY~~~lg~~~~~~~~--~~--~~~~~~~~--~~~--~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   73 (112)
T cd08349           3 VLPVSDIERSLAFYRDVLGFEVDWEHP--EP--GYAFLSRG--GAQ--LMLSEHDGDEPV-PLGRGGSVYIEVEDVDALY   73 (112)
T ss_pred             EEEECCHHHHHHHHHhccCeEEEEEcC--CC--cEEEEEeC--CEE--EEEeccCCCCCC-CCCCcEEEEEEeCCHHHHH
Confidence            689999999999999999999877643  11  23444432  222  333322221111 2345668999999999999


Q ss_pred             HHHHHcCCe-EecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          108 ENIRAKGGN-VTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       108 ~~l~~~G~~-~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +++.++|+. +..++...++|.. .++++||+|+.|+|+|
T Consensus        74 ~~l~~~G~~~~~~~~~~~~~g~~-~~~~~DP~G~~ie~~~  112 (112)
T cd08349          74 AELKAKGADLIVYPPEDQPWGMR-EFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHHHHcCCcceecCccCCCcccE-EEEEECCCCCEEEecC
Confidence            999999998 5666666666544 4889999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=99.53  E-value=3e-13  Score=114.54  Aligned_cols=119  Identities=21%  Similarity=0.349  Sum_probs=82.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC--C-ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+.+|+||+|.|+|++++.+||+++|||++..+...+.  + .+...++..++...  .+.+...      ....+++|+
T Consensus       139 ~~~~l~Hv~l~v~Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~--~~~l~~~------~~~~~~~Hi  210 (286)
T TIGR03213       139 GDQGLGHIVLRVPDVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHH--SLAFAAG------PSEKRLNHL  210 (286)
T ss_pred             CCccccEEEEEcCCHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcc--eEEEecC------CCCCceEEE
Confidence            36899999999999999999999999999876532211  1 11345555433222  1222111      123479999


Q ss_pred             EEEeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           97 AIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +|.|+|+++   ++++|+++|+ ....+...+.+...++|++||+|+++|+...
T Consensus       211 af~v~d~~~v~~~~~~l~~~G~-~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~  263 (286)
T TIGR03213       211 MLEVDTLDDVGLALDRVDADGI-VASTLGRHTNDHMVSFYVATPSGWLVEYGWG  263 (286)
T ss_pred             EEEcCCHHHHHHHHHHHHHCCC-EEecCCcCCCCCeEEEEEECCCCcEEEeecC
Confidence            999988776   7999999999 4444443333445568999999999999874

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.53  E-value=4e-13  Score=97.61  Aligned_cols=108  Identities=24%  Similarity=0.306  Sum_probs=76.7

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc-ccCCCCeeEEEEEeCC---
Q 022871           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAIATED---  102 (291)
Q Consensus        27 v~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~~~v~d---  102 (291)
                      +.|.|+|++++++||+++|||++.....    .  ...+..++ ..  .+.+........ .....+..|++|.|++   
T Consensus         2 ~~l~v~d~~~a~~FY~~~lg~~~~~~~~----~--~~~~~~~~-~~--~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~   72 (114)
T cd07261           2 VLLYVEDPAASAEFYSELLGREPVELSP----T--FALFVLGS-GV--KLGLWSRHTVEPASDATGGGSELAFMVDDGAA   72 (114)
T ss_pred             EEEEECCHHHHHHHHHHHcCCCccCCCC----c--eEEEEeCC-Cc--EEEEeeccccCCCCCCCCCceEEEEEcCCHHH
Confidence            6799999999999999999999765421    1  22233322 22  233333222111 1123467899999975   


Q ss_pred             HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          103 VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       103 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      ++++++++.++|+++..+|...++|.  .++|+||+||+|||+
T Consensus        73 ~~~~~~~~~~~g~~v~~~~~~~~~g~--~~~~~DPdGn~ie~~  113 (114)
T cd07261          73 VDALYAEWQAKGVKIIQEPTEMDFGY--TFVALDPDGHRLRVF  113 (114)
T ss_pred             HHHHHHHHHHCCCeEecCccccCCcc--EEEEECCCCCEEEee
Confidence            88899999999999988887777663  478999999999986

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.53  E-value=1.4e-13  Score=98.85  Aligned_cols=112  Identities=29%  Similarity=0.391  Sum_probs=81.4

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      |+.+.|+|++++.+||+++|||+.........  .....+..+    ...+.+....+......+++..|++|.|+|+++
T Consensus         1 Hi~i~~~d~~~~~~fy~~~lg~~~~~~~~~~~--~~~~~~~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~   74 (112)
T cd06587           1 HVGLTVSDLEAAVAFYEEVLGFEVLFRNGNGG--AEFAVLGLG----GTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDA   74 (112)
T ss_pred             CcceeeCCHHHHHHHHHhccCCEEEEeeccCC--EEEEEEecC----CceEEEecCCCCCCcccCCCeeEEEEECCCHHH
Confidence            78999999999999999999999776543211  233334422    355666554333211234678899999999998


Q ss_pred             hHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEE
Q 022871          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel  278 (291)
                      ..+++    .+.|+.+..++....+ +.+.+|+.||+|+.|||
T Consensus        75 ~~~~l----~~~g~~~~~~~~~~~~-~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          75 AYERL----KAAGVEVLGEPREEPW-GGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             HHHHH----HHcCCcccCCCcCCCC-CcEEEEEECCCCcEEeC
Confidence            88888    9999998877652223 46899999999999986

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.52  E-value=1e-12  Score=94.67  Aligned_cols=121  Identities=25%  Similarity=0.282  Sum_probs=86.9

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ++...+.|..|.++|++++.+||+++|||++....+...  ...+.+..+.....=.+.-     ......+.+-..+.|
T Consensus         5 ~~~~~i~w~Ei~~~D~~ra~~FY~~vFgW~~~~~~~~~~--~~y~~f~~~~~~~gG~l~~-----~~~~~p~~~~~~iy~   77 (127)
T COG3324           5 GEKGTIVWFELPVSDLERAKAFYEKVFGWTFEDYFDMGE--MRYAVFPADGAGAGGGLMA-----RPGSPPGGGGWVIYF   77 (127)
T ss_pred             ccCCccEEEeeecCCHHHHHHHHHHhhCceecccccCCC--ceEEEEECCCccccceecc-----CCcCCCCCCCEEEEE
Confidence            346678999999999999999999999999876644321  2333333222111001110     011112235568889


Q ss_pred             EeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|+|+++..+|.+++|.+++.++.+.+++.+. +.+.||+||+|.|++.
T Consensus        78 ~v~did~~l~rv~~~GG~V~~p~~~~p~~G~~-a~~~Dp~Gn~~~l~s~  125 (127)
T COG3324          78 AVDDIDATLERVVAAGGKVLRPKTEFPGGGRI-AHFVDPEGNRFGLWSP  125 (127)
T ss_pred             ecCChHHHHHHHHhcCCeEEecccccCCceEE-EEEECCCCCEEEEeec
Confidence            99999999999999999999999999976654 8999999999999875

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.52  E-value=5.1e-13  Score=98.03  Aligned_cols=108  Identities=22%  Similarity=0.202  Sum_probs=74.3

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      ...|.|+|++++++||++ |||++..+...     ..+++..++  .  .+.+.......   ......+++|.|+|+++
T Consensus         5 ~~~l~v~Dl~~s~~FY~~-lG~~~~~~~~~-----~~~~~~~~~--~--~l~l~~~~~~~---~~~~~~~~~~~v~dvd~   71 (120)
T cd08350           5 IPNLPSRDLDATEAFYAR-LGFSVGYRQAA-----GYMILRRGD--L--ELHFFAHPDLD---PATSPFGCCLRLPDVAA   71 (120)
T ss_pred             cceeEcCCHHHHHHHHHH-cCCEEEecCCC-----CEEEEEcCC--E--EEEEEecCcCC---CCCCcceEEEEeCCHHH
Confidence            467999999999999999 99998765331     134444332  2  23333221111   11233578999999999


Q ss_pred             HHHHHHHcCCeEe-------cCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          106 LVENIRAKGGNVT-------REPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       106 ~~~~l~~~G~~~~-------~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++++|+++|+++.       ..+...++|.+ .++|+||+||+|+|.+.
T Consensus        72 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          72 LHAEFRAAGLPETGSGIPRITPPEDQPWGMR-EFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHHHHHhCccccccCCCcccCCcCCCCcee-EEEEECCCCCEEEeecC
Confidence            9999999999742       23344455554 48999999999999874

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=99.51  E-value=6.4e-14  Score=108.92  Aligned_cols=127  Identities=39%  Similarity=0.671  Sum_probs=106.6

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-----------cceeEEEecccCCCceeEEEeeeecCcceecc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      ..+.-|+.+.|.|.+++++||+++|||.+......++           ++++-.++++++++.+++++|+.|++...+..
T Consensus        15 ~~r~LH~VfkVgdr~kti~Fyt~vlgMkvLRheef~egc~aacngpyd~kwSktmvGyGpEdshFViELTYNYgV~~Yel   94 (299)
T KOG2943|consen   15 TRRALHYVFKVGDRAKTIDFYTEVLGMKVLRHEEFEEGCEAACNGPYDGKWSKTMVGYGPEDSHFVIELTYNYGVSKYEL   94 (299)
T ss_pred             chheeeEeEeecchHHHHHHHHHhhcceeeehhhhhhhhhhhcCCCcccchhhhheecCCCcccEEEEEEeccCccceec
Confidence            4567899999999999999999999999887665554           67788889999999999999999999988999


Q ss_pred             CcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhhhhc
Q 022871          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQS  290 (291)
Q Consensus       220 ~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~~~~  290 (291)
                      |+++.|+.+.++|+-+.++.+    ..-|.+         ..+.-.+++.||||..|+|.++.+..+++|+
T Consensus        95 Gndfg~i~I~s~dv~~~ve~v----~~p~~~---------~~g~~~~~v~dPdGykF~l~~~~p~s~pv~~  152 (299)
T KOG2943|consen   95 GNDFGGITIASDDVFSKVEKV----NAPGGK---------GSGCGIAFVKDPDGYKFYLIDRGPQSDPVLQ  152 (299)
T ss_pred             cCCcccEEEeHHHHHHHHHHh----cCcCCc---------ccceEEEEEECCCCcEEEEeccCCCCCCeEE
Confidence            999999999999888877777    554432         1123568899999999999998888777764

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.50  E-value=5.2e-13  Score=96.72  Aligned_cols=105  Identities=21%  Similarity=0.203  Sum_probs=71.3

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeE--EEEEe
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ--VAIST  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h--~~~~v  230 (291)
                      .+.|+.|.|.|++++.+||+ .|||++....   +  ... +...+.  ....+.+....       ..+..|  +.+.+
T Consensus         2 ~i~hv~l~v~d~~~s~~FY~-~lG~~~~~~~---~--~~~-~~~~~~--~~~~~~~~~~~-------~~~~~~~~~~~~~   65 (112)
T cd08344           2 SIDHFALEVPDLEVARRFYE-AFGLDVREEG---D--GLE-LRTAGN--DHRWARLLEGA-------RKRLAYLSFGIFE   65 (112)
T ss_pred             ceeEEEEecCCHHHHHHHHH-HhCCcEEeec---C--ceE-EEecCC--CceEEEeecCC-------CCceeeEEEEeEh
Confidence            58999999999999999997 6999976432   1  122 222111  23344443211       123344  55556


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +|++++++++    +++|+++...+.  ++ +.+.+||.||+||+|||..
T Consensus        66 ~d~~~~~~~l----~~~Gi~~~~~~~--~~-~~~~~~~~DP~Gn~iel~~  108 (112)
T cd08344          66 DDFAAFARHL----EAAGVALAAAPP--GA-DPDGVWFRDPDGNLLQVKV  108 (112)
T ss_pred             hhHHHHHHHH----HHcCCceecCCC--cC-CCCEEEEECCCCCEEEEec
Confidence            8899998888    999999876652  22 2467999999999999984

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=7e-13  Score=97.88  Aligned_cols=112  Identities=21%  Similarity=0.222  Sum_probs=75.1

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC------CCCcc-cCCCCeeEEE
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY------GVTSY-DIGTGFGHFA   97 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~g~~~i~   97 (291)
                      .++.|.|+|++++++||++ |||+...+...++    ...+..++ ..  .+.+....      ..... ..+.+..|++
T Consensus         2 ~~v~l~V~Dl~~s~~FY~~-lGf~~~~~~~~~~----~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~   73 (124)
T cd09012           2 IFINLPVKDLEKSTAFYTA-LGFEFNPQFSDEK----AACMVISD-NI--FVMLLTEDFFQTFTPKPIADTKKSTEVLIS   73 (124)
T ss_pred             EEEEeecCCHHHHHHHHHH-CCCEEccccCCCC----eEEEEECC-ce--EEEEEcHHHHhhccCCCcccCCCCCeEEEE
Confidence            6899999999999999987 9999865332221    12233332 22  22222110      00000 1233457999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           98 IATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      |.|+   |+++++++++++|+++..+|...++ .+ .++|+|||||+|||+.
T Consensus        74 f~v~~~~~vd~~~~~l~~~G~~i~~~p~~~~~-~~-~~~~~DPdG~~ie~~~  123 (124)
T cd09012          74 LSADSREEVDELVEKALAAGGKEFREPQDHGF-MY-GRSFADLDGHLWEVLW  123 (124)
T ss_pred             EeCCCHHHHHHHHHHHHHCCCcccCCcccCCc-eE-EEEEECCCCCEEEEEE
Confidence            9997   5889999999999998877766664 33 3789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=3.7e-13  Score=99.36  Aligned_cols=113  Identities=19%  Similarity=0.205  Sum_probs=71.8

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc----e-eccCcceeEEE--E
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----E-YTKGNAYAQVA--I  228 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----~-~~~~~~~~h~~--~  228 (291)
                      |+.|.|+|++++++||+++|||++.....      .+..+...+  ....+.+.......    . .....+..|++  +
T Consensus         2 Hi~l~v~Dl~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~   73 (125)
T cd08357           2 HLAIPVRDLEAARAFYGDVLGCKEGRSSE------TWVDFDFFG--HQLVAHLSPNFNADASDNAVDGHPVPVPHFGLIL   73 (125)
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeccC------CcccccccC--cEEEEEeccCCCcccccCCCCCCccCCceEEEEE
Confidence            89999999999999999999998753211      111122111  12222222111000    0 01112445665  4


Q ss_pred             EecchhhhHHHHHHHHHHhCCeeecCCcccC---CCCceEEEEECCCCCeEEEEe
Q 022871          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIP---GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~---~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      .++|+++++++|    +++|+++..+|....   .++++.+|++|||||+|||..
T Consensus        74 ~~~dv~~~~~~l----~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          74 SEEEFDALAERL----EAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             eHHHHHHHHHHH----HHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            667888888888    999999987775421   123588999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=4.8e-13  Score=97.06  Aligned_cols=104  Identities=19%  Similarity=0.184  Sum_probs=72.1

Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhh
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS  236 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~  236 (291)
                      ..|.|+|++++++||++ |||++....    ..+  .++..+    ...+.+......    ...+..+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~----~~~--~~l~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEN----DNL--AYFRLG----NCAFYLQDYYVK----DWAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecC----CCE--EEEEcC----CEEEEeecCCCc----ccccCCEEEEEECCHHHH
Confidence            46889999999999987 999987643    123  333322    233434321111    112345799999999999


Q ss_pred             HHHHHHHHHHhCCeee-----cCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          237 AEVVNLVTQELGGKIT-----RQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       237 ~~~l~~~~~~~G~~~~-----~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      ++++    +++|+++.     .+|...++ +++.++++|||||+|+|.+
T Consensus        70 ~~~l----~~~G~~~~~~~~~~~~~~~~~-g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHI----KALGLPKKFPGVKLPPITQPW-WGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHH----HHcCCcccccceecCccccCC-CcEEEEEECCCccEEEeeC
Confidence            9999    99998743     34444455 4699999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=7.8e-13  Score=96.98  Aligned_cols=110  Identities=24%  Similarity=0.245  Sum_probs=74.2

Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc------ceeccCcceeEEEEEe
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV------TEYTKGNAYAQVAIST  230 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~------~~~~~~~~~~h~~~~v  230 (291)
                      |.|.|.|++++.+||+++|||.+...   .+..+.  ++..+    +..+.+......      .....+.+..|++|.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~---~~~~~~--~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSAD---SNDGVA--FFQLG----GLVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceeccc---CCCceE--EEEcC----CeEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            67999999999999999999997654   112222  23321    234554332110      0011222444566665


Q ss_pred             ---cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          231 ---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                         +|++++++++    ++.|+++..+|...++ +++.+|++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARA----AAAGATIVKPPQDVFW-GGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHH----HhCCCEEecCCccCCC-CceEEEEECCCCCEEEEee
Confidence               5677777777    9999999888876665 4689999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=99.46  E-value=4.4e-13  Score=96.59  Aligned_cols=95  Identities=18%  Similarity=0.213  Sum_probs=75.0

Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce--eccCcceeEEEEEecc
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAISTDD  232 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~~~v~d  232 (291)
                      +||++.|+|++++.+||+++||+...........+....++..+.+  ...++|+++.+...  ...+.+++||+|.|+|
T Consensus         1 dHv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~--~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D   78 (109)
T PF13669_consen    1 DHVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDG--PVQIELIQPLDGDSPLDRGGGGIHHIAFEVDD   78 (109)
T ss_dssp             EEEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTE--TEEEEEEEESSTTCHHHHTSSEEEEEEEEESH
T ss_pred             CEEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCC--cEEEEEEEeCCCCcccccCCCCEEEEEEEeCC
Confidence            5999999999999999999999987766555555556666554332  27889988766543  2367799999999999


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCC
Q 022871          233 VYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ++++++++    +++|++++..+
T Consensus        79 ~d~~~~~l----~~~G~~~~~~~   97 (109)
T PF13669_consen   79 LDAAIARL----EAQGFRVLDEG   97 (109)
T ss_dssp             HHHHHHHH----HHTTECEEECE
T ss_pred             HHHHHHHH----HHCCCEEcccC
Confidence            99999999    99999987664

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=2.4e-12  Score=94.38  Aligned_cols=110  Identities=25%  Similarity=0.371  Sum_probs=73.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC------CCCcccCCCCeeEEEEEe
Q 022871           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY------GVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        27 v~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~~~i~~~v  100 (291)
                      |.|.|+|++++.+||+++|||++..+.   .+  ...++..++    ..+.+....      .......+.+..++++.+
T Consensus         2 i~l~v~d~~~a~~FY~~~lg~~~~~~~---~~--~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   72 (121)
T cd07251           2 ITLGVADLARSRAFYEALLGWKPSADS---ND--GVAFFQLGG----LVLALFPREELAKDAGVPVPPPGFSGITLAHNV   72 (121)
T ss_pred             eeEeeCCHHHHHHHHHHhcCceecccC---CC--ceEEEEcCC----eEEEEecchhhhhhcCCCCCCCCccceEEEEEc
Confidence            689999999999999999999986551   11  133444322    223332211      111111222334455554


Q ss_pred             ---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          101 ---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       101 ---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                         +|++++++++.+.|+++..++...++|... ++++||+||+|||..
T Consensus        73 ~~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DP~Gn~iei~~  120 (121)
T cd07251          73 RSEEEVDAVLARAAAAGATIVKPPQDVFWGGYS-GYFADPDGHLWEVAH  120 (121)
T ss_pred             CCHHHHHHHHHHHHhCCCEEecCCccCCCCceE-EEEECCCCCEEEEee
Confidence               689999999999999998777666665544 889999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.44  E-value=8.3e-13  Score=96.41  Aligned_cols=125  Identities=34%  Similarity=0.508  Sum_probs=82.6

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCC---------CC------ceeEEEeeccCCCC
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP---------EQ------SHFVVELTYNYGVT   85 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~---------~~------~~~~~~~~~~~~~~   85 (291)
                      -..+.|.++.++|+.++..||++++|+.++.+...+.-.+...+++...         ..      ....+++.++.+..
T Consensus        20 t~~~~~t~~rvkd~~~Sl~fytr~~gm~l~~~~~fke~~Fsl~fL~~~~~~~vP~~~~~~~v~~~~~~~~~ELthn~Gte   99 (170)
T KOG2944|consen   20 TYLLQQTMLRVKDPTGSLKFYTRVNGMALLVPDDFKEAKFSLYFLGAEVSEDVPKPEHGVSVFVFSRNAKLELTHNWGTE   99 (170)
T ss_pred             hhhhhhceeecccchhhhhhhhhhccceeechhhhhHhhhHHHhhcccccccCccCCCCCceEEecccCceeeecCCCCC
Confidence            4556899999999999999999999998876644433222222222210         00      00124555543321


Q ss_pred             -----ccc----CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           86 -----SYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        86 -----~~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                           .+.    .+.|.+||||.|+|+.++.++|++.|+++...+.+..-  ...+++.||||+.|||...
T Consensus       100 s~~~~~~~ngN~~prGfgHIci~V~di~sac~~lkekGV~f~Kk~~dGk~--K~iaF~~dpDgywiei~~~  168 (170)
T KOG2944|consen  100 SPPDQAYLNGNKEPRGFGHICIEVDDINSACERLKEKGVRFKKKLKDGKM--KPIAFLHDPDGYWIEIELE  168 (170)
T ss_pred             CCcchhhcCCCCCCCccceEEEEeCCHHHHHHHHHHhCceeeecCCCccc--cceeEEECCCCCeEEEeec
Confidence                 111    23489999999999999999999999996654433322  1358899999999999764

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=99.44  E-value=3.7e-13  Score=98.22  Aligned_cols=73  Identities=26%  Similarity=0.429  Sum_probs=56.8

Q ss_pred             eeEEEeeeecCcce-----eccC---c-ceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCC
Q 022871          203 TTVLELTYNYGVTE-----YTKG---N-AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG  273 (291)
Q Consensus       203 ~~~l~l~~~~~~~~-----~~~~---~-~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G  273 (291)
                      ...++|..+++...     +..+   + |.+||||.|+||+++..++    ++.|+++...|....-  -..+|+.||||
T Consensus        87 ~~~~ELthn~Gtes~~~~~~~ngN~~prGfgHIci~V~di~sac~~l----kekGV~f~Kk~~dGk~--K~iaF~~dpDg  160 (170)
T KOG2944|consen   87 NAKLELTHNWGTESPPDQAYLNGNKEPRGFGHICIEVDDINSACERL----KEKGVRFKKKLKDGKM--KPIAFLHDPDG  160 (170)
T ss_pred             cCceeeecCCCCCCCcchhhcCCCCCCCccceEEEEeCCHHHHHHHH----HHhCceeeecCCCccc--cceeEEECCCC
Confidence            45778887776543     1222   3 8999999999999999999    9999998777764211  15799999999


Q ss_pred             CeEEEEec
Q 022871          274 WKTVLVDN  281 (291)
Q Consensus       274 ~~iel~~~  281 (291)
                      +.|||..+
T Consensus       161 ywiei~~~  168 (170)
T KOG2944|consen  161 YWIEIELE  168 (170)
T ss_pred             CeEEEeec
Confidence            99999865

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.43  E-value=2.4e-12  Score=93.36  Aligned_cols=104  Identities=20%  Similarity=0.294  Sum_probs=70.9

Q ss_pred             EEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHHH
Q 022871           27 AVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKL  106 (291)
Q Consensus        27 v~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~  106 (291)
                      ..|.|+|++++++||++ |||++....+      ...++..++  ..+.+.  ..... .   ..+-.+++|.|+|++++
T Consensus         5 ~~l~v~Dl~~s~~FY~~-LGf~~~~~~~------~~~~l~~~~--~~l~l~--~~~~~-~---~~~~~~~~~~v~did~~   69 (113)
T cd08356           5 PFIPAKDFAESKQFYQA-LGFELEWEND------NLAYFRLGN--CAFYLQ--DYYVK-D---WAENSMLHLEVDDLEAY   69 (113)
T ss_pred             eccccccHHHHHHHHHH-hCCeeEecCC------CEEEEEcCC--EEEEee--cCCCc-c---cccCCEEEEEECCHHHH
Confidence            46889999999999988 9999976532      134555432  222222  11111 1   11234788999999999


Q ss_pred             HHHHHHcCCeEe-----cCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          107 VENIRAKGGNVT-----REPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       107 ~~~l~~~G~~~~-----~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +++|+++|+.+.     ..+...++|.+ .++|+|||||+++|.+
T Consensus        70 ~~~l~~~G~~~~~~~~~~~~~~~~~g~r-~f~~~DPdGn~~~~~~  113 (113)
T cd08356          70 YEHIKALGLPKKFPGVKLPPITQPWWGR-EFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHHHHHcCCcccccceecCccccCCCcE-EEEEECCCccEEEeeC
Confidence            999999998643     23334455554 4999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.34  E-value=1.7e-11  Score=97.19  Aligned_cols=100  Identities=24%  Similarity=0.380  Sum_probs=73.2

Q ss_pred             ceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCC--CceeeEEEecCCCCceeEEEeeccCCC---C---c---c
Q 022871           21 KRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYNYGV---T---S---Y   87 (291)
Q Consensus        21 ~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~---~   87 (291)
                      +.+++||++.|+  |++++++||+++|||+.......++  .+.....+..++.  .+.+++..+...   .   .   .
T Consensus         1 ~~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~~g--~i~l~L~~~~~~~~~s~~~~fl~~   78 (191)
T cd07250           1 LTRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASPDG--KIRIPLNEPASGKRKSQIQEFLEY   78 (191)
T ss_pred             CceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECCCC--cEEEEEecCCCCCCccHHHHHHHH
Confidence            468999999999  9999999999999999887765433  2333444443332  344555433221   1   1   1


Q ss_pred             cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCc
Q 022871           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        88 ~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      ..|+|++||||.|+|+++++++|+++|+.+...|.
T Consensus        79 ~~G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~l~~P~  113 (191)
T cd07250          79 YGGAGVQHIALATDDIFATVAALRARGVEFLPIPD  113 (191)
T ss_pred             hCCCceeEEEEECCCHHHHHHHHHHcCCeeccCch
Confidence            24789999999999999999999999999877654

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=99.22  E-value=7e-11  Score=93.63  Aligned_cols=99  Identities=20%  Similarity=0.332  Sum_probs=73.1

Q ss_pred             CCceeEEeeeC--CccccHHHHHhhhCCeeeeeeccCC--cceeEEEecccCCCceeEEEeeeecCc--c-------eec
Q 022871          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YKYTLAMLGYAEEDQTTVLELTYNYGV--T-------EYT  218 (291)
Q Consensus       152 ~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~l~~~~~~--~-------~~~  218 (291)
                      ..++|+++.|+  |++++.+||+++|||+........+  .......+..+  .....++|..+.+.  .       ..+
T Consensus         2 ~~iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~~~~~~~~~~~s~~l~~~--~g~i~l~L~~~~~~~~~s~~~~fl~~~   79 (191)
T cd07250           2 TRIDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSFDIEDPYSGLRSRVLASP--DGKIRIPLNEPASGKRKSQIQEFLEYY   79 (191)
T ss_pred             ceeeEEEeecChhHHHHHHHHHHHhhCCceeeEEccCcCcccEEEEEEECC--CCcEEEEEecCCCCCCccHHHHHHHHh
Confidence            35899999999  9999999999999999876654333  22333334422  23566777654431  1       122


Q ss_pred             cCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCc
Q 022871          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       219 ~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      .|+|++|+||.|+|++++++++    +++|++++..|.
T Consensus        80 ~G~Gv~HIAf~vdDI~~~~~~L----~~~Gv~~l~~P~  113 (191)
T cd07250          80 GGAGVQHIALATDDIFATVAAL----RARGVEFLPIPD  113 (191)
T ss_pred             CCCceeEEEEECCCHHHHHHHH----HHcCCeeccCch
Confidence            4789999999999999999999    999999988873

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.22  E-value=2.4e-10  Score=78.79  Aligned_cols=118  Identities=29%  Similarity=0.330  Sum_probs=75.4

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC-Cc-ccCCC--CeeEE--
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TS-YDIGT--GFGHF--   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~--g~~~i--   96 (291)
                      .+-|++|.|+|++++.+||+++||++.-.+.+        .|+.+.-....+...+...... .. ...+.  .+.|+  
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRstd--------~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRSTD--------TWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhcccccccccc--------eEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            45799999999999999999999998644322        2221111111122222221111 11 11122  23454  


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEecCCcccC---CCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIATEDVYKLVENIRAKGGNVTREPGPLK---GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~---~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .+.++|.-++.+||+++|+....+|.-..   -|..+.+++.||.||.+|+-.-.
T Consensus        76 Vl~~edW~alaerlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~fR  130 (138)
T COG3565          76 VLPVEDWFALAERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGFR  130 (138)
T ss_pred             EEEHHHHHHHHHHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeeccc
Confidence            46678999999999999999777765332   24566688999999999987544

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=99.17  E-value=2.6e-10  Score=99.26  Aligned_cols=104  Identities=22%  Similarity=0.357  Sum_probs=74.1

Q ss_pred             CCCCceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCCC--ceeeEEEecCCCCceeEEEeeccCC---CC----
Q 022871           17 PKKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYG---VT----   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~----   85 (291)
                      ..+.+.+++||++.|+  |+++++.||+++|||+...+.+....  +.....+...++  .+.+++..+..   ..    
T Consensus       152 ~~~~~~~iDHv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g--~~~i~L~ep~~~~~~s~i~~  229 (353)
T TIGR01263       152 PGVGLIAIDHLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDG--KVKIPLNEPASGKDKSQIEE  229 (353)
T ss_pred             CCCCeEEeeeeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCC--cEEEEEeccCCCCCCCHHHH
Confidence            3456999999999999  99999999999999999876654321  222122222222  34455554311   11    


Q ss_pred             --cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCc
Q 022871           86 --SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 --~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                        ....|.|++||||.|+|+++++++|+++|+.+...|.
T Consensus       230 fl~~~~g~Gv~HiAf~vdDi~~~~~~l~~~Gv~~l~~P~  268 (353)
T TIGR01263       230 FLEFYNGAGVQHIALNTDDIVRTVRALRARGVEFLDTPD  268 (353)
T ss_pred             HHHHcCCCCccEEEEEcCCHHHHHHHHHHcCCccCcCCH
Confidence              1224789999999999999999999999999887654

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=99.16  E-value=6.4e-10  Score=89.30  Aligned_cols=122  Identities=21%  Similarity=0.226  Sum_probs=86.5

Q ss_pred             CCCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc-ceeccCcceeEEE
Q 022871          149 PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-TEYTKGNAYAQVA  227 (291)
Q Consensus       149 ~~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~~~~~~~~~~h~~  227 (291)
                      ..+..+..|.|.|.|++....||++++|+++..+...      ...+..++   ...+.|.+..+. .+.+...|+.|++
T Consensus         6 ~~~~~v~~v~L~vrdL~~~~~FY~~ilGL~v~~~~~~------~v~L~vgg---~~LL~L~q~~~a~~~~~~~aGLyH~A   76 (265)
T COG2514           6 TTPTFVGAVTLNVRDLDSMTSFYQEILGLQVLEETDG------SVTLGVGG---TPLLTLEQFPDARRPPPRAAGLYHTA   76 (265)
T ss_pred             CCCcEEEEEEEEeccHHHHHHHHHHhhCCeeeeccCc------eEEEeeCC---EEEEEEEeCCCCCCCCccccceeeee
Confidence            3456788999999999999999999999998765432      12233222   245555543322 2234667999999


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |-+++-.++.+.+ .++.+.|+.+. +...+..  .-.+||.||+||-||+..+.+
T Consensus        77 fLlP~r~~L~~~l-~hl~~~~~~l~-Ga~DH~v--SEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          77 FLLPTREDLARVL-NHLAEEGIPLV-GASDHLV--SEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             eecCCHHHHHHHH-HHHHhcCCccc-ccCcchh--heeeeecCCCCCeEEEEecCC
Confidence            9999855554444 55588898875 5555544  367999999999999998754

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=99.09  E-value=1.4e-09  Score=85.16  Aligned_cols=150  Identities=22%  Similarity=0.326  Sum_probs=84.7

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC---Cc-c-----cCCCCee
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV---TS-Y-----DIGTGFG   94 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~-----~~~~g~~   94 (291)
                      |+|+.+.|+|++++.++|++.|||++......+..+.....+.+++...+++- +......   .. +     ..+.|+.
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~-i~~~~~~~~~~~~~~~~~~~~~~g~~   79 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIA-IDPEAPAPDRGRWFGLDRLAGGEGLY   79 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEE-ES-HHHSTGGGT-TTTHHHHT--EEE
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEE-eCCcccccccccceechhhcCCCCeE
Confidence            68999999999999999988899999998888776777777777654322222 2111111   11 1     1467999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCce--EEEEEECC----CCCEEEEEeCCC-C---------CCCceeEE
Q 022871           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT--HIAFVKDP----DGYIFELIQRGP-T---------PEPLCQVM  158 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~--~~~~~~dp----~G~~iel~~~~~-~---------~~~~~hv~  158 (291)
                      .+|+.++|+++..++|.+.|+.... +...+++..  ..+++.++    .+..-.+++... .         ...+.+|.
T Consensus        80 ~~~l~t~d~~~~~~~l~~~G~~~~~-r~~~dG~~~~w~~~~~~~~~~p~~~~~Pf~i~~~~~~~~~~~h~ng~~~i~~v~  158 (175)
T PF13468_consen   80 GWALRTDDIEAVAARLRAAGLDAGS-RVRPDGGDLRWRLAFPEDGALPFGGLLPFFIQWETPHPEWARHPNGALGITRVV  158 (175)
T ss_dssp             EEEEE-S-HHHHHHHHHTTT-EEEE-EEEEEE-EEEEEEEEEE-SS---SS---EEEEESS-CCHHTTT--TTEEEEEEE
T ss_pred             EEEEecCCHHHHHHHHHhcCCCCCC-cCcCCCCcceEEEEEeCCcccccCCCCcEEEEeCCCCcccccCCCccceEEEEE
Confidence            9999999999999999999986221 122222222  23444553    245555564332 1         13589999


Q ss_pred             eeeCCccccHHHHHhhh
Q 022871          159 LRVGDLGRSIKFYEKAL  175 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~l  175 (291)
                      +.++|++++.++|.++|
T Consensus       159 i~~~d~~~~~~~~~~l~  175 (175)
T PF13468_consen  159 IAVPDPDAAAARYARLL  175 (175)
T ss_dssp             EEETTHHHHHHHHHHH-
T ss_pred             EEeCCHHHHHHHHHhhC
Confidence            99999999999999875

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.07  E-value=2.7e-09  Score=79.11  Aligned_cols=114  Identities=14%  Similarity=0.063  Sum_probs=70.2

Q ss_pred             Eeee-CCccccHHHHHhhhCCeeeeeeccCC----------cceeEEEecccCCCceeEEEeeeecCcceeccCcceeEE
Q 022871          158 MLRV-GDLGRSIKFYEKALGMKLLRTVDKPE----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       158 ~l~v-~D~~~~~~Fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      .|.+ .|.+++++||+++||+++.......+          +.+....+..+    +..+.+....+.... .+++..++
T Consensus         4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~l~~~d~~~~~~~-~~~~~~~l   78 (128)
T cd06588           4 YLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIG----GQRLMASDGGPGFPF-TFGNGISL   78 (128)
T ss_pred             EEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEEC----CEEEEEEcCCCCCCC-CCCCCEEE
Confidence            4667 89999999999999999876543211          11112222211    223333322221111 12345679


Q ss_pred             EEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      ++.|+|++++ ++++++|.+ |++++.+|...++ +.+.++++||+|+.|+|.
T Consensus        79 ~i~~~~~e~v-~~~~~~l~~-~g~~~~~~~~~~~-g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          79 SVECDSEEEA-DRLFEALSE-GGTVLMPLQKTFW-SPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEECCCHHHH-HHHHHHHhc-CCeEeccchhcCc-ccccEEEECCCCCEEEeC
Confidence            9999874333 333444365 4588888888887 468999999999999984

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.06  E-value=2.3e-08  Score=73.53  Aligned_cols=118  Identities=19%  Similarity=0.216  Sum_probs=86.8

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEEEeeecCC----------CceeeEEEecCCCCceeEEEeeccCCCCcccCCC-Cee
Q 022871           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRDVPE----------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT-GFG   94 (291)
Q Consensus        27 v~l~v~-d~~~a~~fy~~~LG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~   94 (291)
                      ..|..+ |.++|++||+++||.+.+.+...++          +...++.+.+++.  .+.+  ....+......+. --.
T Consensus         4 PYl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~--~im~--sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           4 PYLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGS--TIML--SDAFPDMGATEGGGTSL   79 (136)
T ss_pred             eEEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCE--EEEE--ecCCCccCcccCCCeeE
Confidence            457788 9999999999999999998877766          5666677776532  1211  1111111111222 234


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .|.+.+.|++++++|+.+.|+++..+..+..+|.+. ..++||.|+.|-|.....
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~-G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRY-GQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCcccce-EEEECCCCCEEEEecCcc
Confidence            567788889999999999999999999999998764 889999999999876643

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=99.04  E-value=3.7e-09  Score=73.03  Aligned_cols=115  Identities=22%  Similarity=0.291  Sum_probs=72.7

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce--eccC----cceeEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKG----NAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~----~~~~h~  226 (291)
                      .+.|+.+.|.|++++++||.++||...-...   +   .+..++.-+  ......+....+...  ...+    ....-+
T Consensus         4 ~~FHLA~pV~Dl~~tr~FYgevlG~~~GRst---d---~wvdfDfyG--HQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGv   75 (138)
T COG3565           4 VPFHLAIPVNDLDETRRFYGEVLGCKEGRST---D---TWVDFDFYG--HQVVAHLTPQPDSQGSGKVDGHGVPPPHFGV   75 (138)
T ss_pred             cceEEeeeccccHHHHhhhhhhccccccccc---c---eEEEeeecc--cEEEEEecCCcccccCcccCCCCCCCccceE
Confidence            4679999999999999999999999854322   1   222222111  112222211111000  0011    122345


Q ss_pred             EEEecchhhhHHHHHHHHHHhCCeeecCCcc----cCCCCceEEEEECCCCCeEEEEe
Q 022871          227 AISTDDVYKSAEVVNLVTQELGGKITRQPGS----IPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~----~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      .|.++|..++.+++    +++|+.+..+|.-    .++ -++.+++.||+||.+|+-.
T Consensus        76 Vl~~edW~alaerl----ea~gi~~~i~P~vRF~Ge~g-Eq~TlFl~DP~gN~lEfK~  128 (138)
T COG3565          76 VLPVEDWFALAERL----EAAGIPFHIPPKVRFKGEPG-EQRTLFLFDPSGNALEFKG  128 (138)
T ss_pred             EEEHHHHHHHHHHH----HHcCCCcccCceEEecCCcc-ceEEEEEECCCCCeeeeec
Confidence            66788888888888    9999998888854    233 3578999999999999854

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.01  E-value=1e-08  Score=75.32  Aligned_cols=117  Identities=16%  Similarity=0.157  Sum_probs=80.2

Q ss_pred             EeeeC-CccccHHHHHhhhCCeeeeeeccCC----------cceeEEEecccCCCceeEEEeeeecCcceecc-CcceeE
Q 022871          158 MLRVG-DLGRSIKFYEKALGMKLLRTVDKPE----------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK-GNAYAQ  225 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~h  225 (291)
                      -|.+. |.+++++||+++||.++..+....+          +...-..+..+    +..|-+....+...... ++...-
T Consensus         5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~----g~~im~sd~~~~~~~~~~~~~s~~   80 (136)
T COG2764           5 YLFFNGNAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIG----GSTIMLSDAFPDMGATEGGGTSLS   80 (136)
T ss_pred             EEEECCCHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEEC----CEEEEEecCCCccCcccCCCeeEE
Confidence            36677 9999999999999998877765544          22222222221    22333323222222222 234456


Q ss_pred             EEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 ~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |.+.++|+++..+++    .+.|+++..++....|+ .++..++||.|+.|-|.....
T Consensus        81 l~~~~~d~da~f~~a----~~aGa~v~mpl~~~fwG-~r~G~v~D~fGv~W~l~~~~~  133 (136)
T COG2764          81 LDLYVEDVDAVFERA----AAAGATVVMPLEDTFWG-DRYGQVTDPFGVVWMLNTPVE  133 (136)
T ss_pred             EEEEehHHHHHHHHH----HhcCCeEEecchhcCcc-cceEEEECCCCCEEEEecCcc
Confidence            778888877777777    99999999999999884 699999999999999986543

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.01  E-value=3e-08  Score=73.42  Aligned_cols=111  Identities=16%  Similarity=0.211  Sum_probs=73.4

Q ss_pred             EEEEe-CCHHHHHHHHHHhcCCEEEEeeec----------CCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           27 AVYRV-GDLDRTIKFYTECFGMKLLRKRDV----------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        27 v~l~v-~d~~~a~~fy~~~LG~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      ..|.+ .|.++|++||+++||+++......          ..+....+.+.+++.  .+.+  ......... .+.+-.+
T Consensus         3 p~L~~~~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~--~l~~--~d~~~~~~~-~~~~~~~   77 (128)
T cd06588           3 PYLWFNGNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQ--RLMA--SDGGPGFPF-TFGNGIS   77 (128)
T ss_pred             eEEeeCCCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCE--EEEE--EcCCCCCCC-CCCCCEE
Confidence            35667 899999999999999998876531          123334555555432  2222  111111111 1223457


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEE
Q 022871           96 FAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      +++.|+|   +++++++|.+.| ++..++...++|.+. +.++||+|+.|+|
T Consensus        78 l~i~~~~~e~v~~~~~~l~~~g-~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i  127 (128)
T cd06588          78 LSVECDSEEEADRLFEALSEGG-TVLMPLQKTFWSPLF-GWVTDRFGVSWQI  127 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhcCC-eEeccchhcCccccc-EEEECCCCCEEEe
Confidence            8888876   778889987766 788787888887754 8899999999987

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.96  E-value=1.1e-08  Score=71.97  Aligned_cols=118  Identities=23%  Similarity=0.224  Sum_probs=73.2

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec----C--cceeccCcceeEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY----G--VTEYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~----~--~~~~~~~~~~~h~  226 (291)
                      ....|+|.|.|++++.+||+. |||+.-+.....  ........  .  .-..+-|....    -  .-.....+.-..+
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde--~a~~mi~~--~--ni~vMLL~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDE--DAACMIIS--D--NIFVMLLEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCcccc--cceeEEEe--c--cEEEEEeccHHhhhhcccccccccCCceEEE
Confidence            356899999999999999977 999865433221  12222222  1  01222221100    0  0011233456788


Q ss_pred             EEEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +|.+.+   +++.++++    .++|++...+|.....  .+..-|.|||||.||++--++
T Consensus        76 ~ls~~s~eevd~~v~ka----~eaGGk~~~~~~d~gf--MYg~~fqDpDGh~wE~l~m~~  129 (133)
T COG3607          76 SLSAGSREEVDELVDKA----LEAGGKPANEPQDEGF--MYGRSFQDPDGHVWEFLWMDP  129 (133)
T ss_pred             EeccCcHHHHHHHHHHH----HHcCCCCCCCcccccc--ccceeeeCCCCCeEEEEEeCH
Confidence            998875   55555555    9999998777766544  345679999999999986544

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=98.96  E-value=3.2e-09  Score=92.05  Aligned_cols=101  Identities=21%  Similarity=0.344  Sum_probs=73.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC-----ceeeEEEecCCCCceeEEEeeccCC-------CCc
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----KYSNAFLGFGPEQSHFVVELTYNYG-------VTS   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~   86 (291)
                      ..+.+|+||++.|++++.++.||+++|||+.....+.++.     +.....+..++.  .+.+++..+..       ...
T Consensus       176 ~gl~~IDHi~iaV~~ld~a~~fY~~vlGf~~~~~~d~~~i~~~~sgl~S~vl~sp~g--~v~ipLnEP~~~~~~~SqI~e  253 (398)
T PLN02875        176 YGLRRLDHAVGNVPNLLPAVNYIAGFTGFHEFAEFTAEDVGTVDSGLNSMVLASNNE--MVLLPLNEPTFGTKRKSQIQT  253 (398)
T ss_pred             CCcceeCcceechhhHHHHHHHHHHhcCCeeeeeeccccccccccceEEEEEEcCCC--cEEEEeccCCCCCCCcChHHH
Confidence            3488999999999999999999999999998865543221     234444443333  34455544321       122


Q ss_pred             c---cCCCCeeEEEEEeCCHHHHHHHHHHc----CCeEecCC
Q 022871           87 Y---DIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREP  121 (291)
Q Consensus        87 ~---~~~~g~~~i~~~v~d~~~~~~~l~~~----G~~~~~~~  121 (291)
                      +   ..|+|++||||.|+|+.++.++|+++    |+.++..|
T Consensus       254 FL~~~~G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~P  295 (398)
T PLN02875        254 YLEHNEGPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPP  295 (398)
T ss_pred             HHHhcCCCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCC
Confidence            2   35789999999999999999999999    99887644

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.92  E-value=4.8e-09  Score=77.53  Aligned_cols=122  Identities=22%  Similarity=0.383  Sum_probs=73.3

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCce--eeEEEecCCC-CceeEEEe--------eccCCCC-cccC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKY--SNAFLGFGPE-QSHFVVEL--------TYNYGVT-SYDI   89 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~--------~~~~~~~-~~~~   89 (291)
                      ++++|++|.|+|++++.+||+++||++...+........  .......... ........        ....... ....
T Consensus         1 ~~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (138)
T COG0346           1 MGIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPG   80 (138)
T ss_pred             CceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecC
Confidence            468999999999999999999999999988754332211  1111111110 00000000        0000000 0011


Q ss_pred             C-CCeeEEEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           90 G-TGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 ~-~g~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      + .+..|+++.+.+   .......+...|..+..... ...+.  .+|++||||+.+|+.+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~--~~~~~dp~g~~~e~~~  138 (138)
T COG0346          81 GDLGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEP-GRGGV--HVYFRDPDGILIELAT  138 (138)
T ss_pred             chhccCceeEecccccccceEEEeeCCCCCEEEeecC-CCcce--EEEEECCCCcEEEeeC
Confidence            1 247799999988   66667777788888655433 22222  5899999999999864

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.91  E-value=9.7e-08  Score=66.99  Aligned_cols=115  Identities=23%  Similarity=0.314  Sum_probs=65.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCH
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~  103 (291)
                      +.+-+|.|+|.+..++||++.|||++..+..      ..++++.......++++-++............++++.+.|++.
T Consensus         1 f~~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~   74 (125)
T PF14506_consen    1 FIIPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNP   74 (125)
T ss_dssp             -EEEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSH
T ss_pred             CcCceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCH
Confidence            3577899999999999999999999988865      3567766555566777776544433333444789999999987


Q ss_pred             HHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          104 YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       104 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .++ +.|.++|.++... .... .++. +-+.+|+|..|.+....
T Consensus        75 ~EI-e~LLar~~~~~~l-~kg~-~gyA-fe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   75 KEI-EALLARGAQYDRL-YKGK-NGYA-FEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHH-HHHHHC-S--SEE-EE-S-SSEE-EEEE-TT--EEEEE--S
T ss_pred             HHH-HHHHhccccccee-EEcC-CceE-EEEECCCCCEEEEEEcC
Confidence            774 4455555553322 1111 2222 33689999999887553

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.88  E-value=8.2e-09  Score=76.26  Aligned_cols=121  Identities=24%  Similarity=0.291  Sum_probs=72.4

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcc---eeEEEecccCC--CceeEE------EeeeecCcc-eeccC
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK---YTLAMLGYAEE--DQTTVL------ELTYNYGVT-EYTKG  220 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~l------~l~~~~~~~-~~~~~  220 (291)
                      .+.|+.|.|+|++++.+||+++||+++..........   ....+......  ......      ......... ....+
T Consensus         2 ~l~hv~l~v~dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (138)
T COG0346           2 GIHHVTLAVPDLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGG   81 (138)
T ss_pred             ceEEEEEeeCCHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCc
Confidence            5789999999999999999999999987655432221   11221111000  000000      000000000 01111


Q ss_pred             -cceeEEEEEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          221 -NAYAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 -~~~~h~~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                       .+..|+++.+++   +.......    ...|..+...+. ..+  +..+|++||||+.||+.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~G~~~~~~~~-~~~--~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          82 DLGLGHLAFEVDDEAFGDAALAFL----DPDGVRIELGEP-GRG--GVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hhccCceeEecccccccceEEEee----CCCCCEEEeecC-CCc--ceEEEEECCCCcEEEeeC
Confidence             246799999998   55555565    777888665544 323  248999999999999974

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.83  E-value=3.9e-08  Score=72.67  Aligned_cols=125  Identities=15%  Similarity=0.210  Sum_probs=82.6

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcc--cCCCCee
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFG   94 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~   94 (291)
                      +++.+.++.||.+.+++.+++..+++ .|||+.+.+-...    ....++.  +...+++.-.+......+  ..|++++
T Consensus         3 nP~g~~G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk----~v~l~rQ--G~I~~vln~ep~s~a~~~~~~HG~sv~   75 (139)
T PF14696_consen    3 NPLGLDGFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSK----DVTLYRQ--GDINFVLNSEPDSFAAEFAAQHGPSVC   75 (139)
T ss_dssp             -TT-EEEEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCC----SEEEEEE--TTEEEEEEEESTSCHHHHHHHHSSEEE
T ss_pred             CCCCCCCeEEEEEecCCHHHHHHHHH-HhCcceEEecCCc----ceEEEEe--CCEEEEEeCCCcchHHHHHHhcCCEEE
Confidence            35679999999999999888888875 5999998764322    2333443  355666654332222222  2688999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      .|+|.|+|.+++++++.++|++....+...  +...+.-++.++|.++.|+++...
T Consensus        76 aiafrV~Da~~A~~rA~~~GA~~~~~~~~~--~e~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   76 AIAFRVDDAAAAYERAVALGAEPVQEPTGP--GELNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EEEEEES-HHHHHHHHHHTT--EEEEEEET--T-BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EEEEEeCCHHHHHHHHHHcCCcCcccCCCC--CcEeeeeEEccCCCEEEEEecCCC
Confidence            999999999999999999999977654322  334457789999999999998644

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=98.69  E-value=1.8e-07  Score=66.05  Aligned_cols=116  Identities=18%  Similarity=0.233  Sum_probs=71.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeecc---CCC-Cc--ccCCCCeeEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN---YGV-TS--YDIGTGFGHF   96 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~--~~~~~g~~~i   96 (291)
                      +.-.|.|.|+|++++.+||+. |||+.-.......   ..+.+-.  .+....+ +...   .-. .+  -.....-.-+
T Consensus         3 ~mIFvNLPVkDL~~S~~Fy~a-lGfk~Npq~sde~---a~~mi~~--~ni~vML-L~~~~fq~F~~~~i~dt~~s~evli   75 (133)
T COG3607           3 QMIFVNLPVKDLEASKAFYTA-LGFKFNPQFSDED---AACMIIS--DNIFVML-LEEARFQTFTKRQIADTTKSREVLI   75 (133)
T ss_pred             eEEEEecchhhHHHHHHHHHH-hCcccCCCccccc---ceeEEEe--ccEEEEE-eccHHhhhhcccccccccCCceEEE
Confidence            456889999999999999987 9999754432221   2233321  1222222 1110   000 00  0112233456


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           97 AIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+.+.   ++++..++..++|.+...++.+... -+ ...|.|||||.||++.=
T Consensus        76 ~ls~~s~eevd~~v~ka~eaGGk~~~~~~d~gf-MY-g~~fqDpDGh~wE~l~m  127 (133)
T COG3607          76 SLSAGSREEVDELVDKALEAGGKPANEPQDEGF-MY-GRSFQDPDGHVWEFLWM  127 (133)
T ss_pred             EeccCcHHHHHHHHHHHHHcCCCCCCCcccccc-cc-ceeeeCCCCCeEEEEEe
Confidence            77774   5889999999999998766554432 22 25589999999999864

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.62  E-value=3.3e-07  Score=77.04  Aligned_cols=108  Identities=22%  Similarity=0.236  Sum_probs=68.8

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .+..||+|.|.|+++|.+||+++|++.. .    .++. ...+ +  .  .-..+-+... +    .....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-F----sde~-a~cm-~--d--tI~vMllt~~-D----~~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-W----DGDK-LFLL-G--K--TSLYLQQTKA-E----KKNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-C----CCCc-cccc-c--C--cEEEEEecCC-C----CCCcceEEEEeccC
Confidence            4577999999999999999999988874 1    1111 1121 1  1  1222222221 1    12335567999998


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      + .+.++.+-+++.++|++...+|..+..    .--|.|||||.||++=
T Consensus       310 S-re~VD~lv~~A~aaGG~~~~~~~D~Gf----~rsf~D~DGH~WEi~~  353 (357)
T PRK01037        310 C-EHDFVRFLRRWEMLGGELGEQADGHFP----LRLVFDLDGHIWVVSC  353 (357)
T ss_pred             C-HHHHHHHHHHHHHcCCCCCCCcccccC----cceeECCCCCEEEEEE
Confidence            7 444444444449999987666665433    4468999999999973

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=98.52  E-value=1.6e-07  Score=76.74  Aligned_cols=130  Identities=15%  Similarity=0.175  Sum_probs=88.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc--e-----eccCccee
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--E-----YTKGNAYA  224 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~-----~~~~~~~~  224 (291)
                      .+++||.++|.|...+.+||+..|||++....+..-+...+.......+  ...+.+.....+.  .     ..+|.+.-
T Consensus        16 l~f~Hi~F~vgna~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g--~~vFv~~s~~~p~~~~~G~~l~~Hgdgvk   93 (381)
T KOG0638|consen   16 LRFHHIEFWVGNAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQG--KIVFVFNSAYNPDNSEYGDHLVKHGDGVK   93 (381)
T ss_pred             eeeeEEEEEecCcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcC--CEEEEEecCCCCCchhhhhhhhhcccchh
Confidence            4689999999999999999999999997764432211111111111111  2222222222211  1     12556788


Q ss_pred             EEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCC--CCceEEEEECCCCCeEEEEechhhhhh
Q 022871          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       225 h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~Dp~G~~iel~~~~~~~~~  287 (291)
                      -+||.|+|.+++...+    .++|+++..+|.+...  +..+++.+..+.-....+++++.+.++
T Consensus        94 dvafeVeD~da~~~~~----va~Ga~v~~~p~~~~da~G~v~~A~l~tygd~thtlvEr~~y~g~  154 (381)
T KOG0638|consen   94 DVAFEVEDADAIFQEA----VANGAKVVRPPWEESDAQGAVTYAVLKTYGDTTHTLVERKGYKGP  154 (381)
T ss_pred             ceEEEecchHHHHHHH----HHcCCcccCCcceeeccCCcEEEEEEecccchhhhhhhhcccccc
Confidence            8999999999999999    9999999999877432  234778888888788888888776654

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=98.51  E-value=3.4e-07  Score=76.29  Aligned_cols=101  Identities=21%  Similarity=0.315  Sum_probs=73.1

Q ss_pred             CceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCCC--ceeeEEEecCCCCceeEEEeeccCCCC----cc---c
Q 022871           20 DKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVT----SY---D   88 (291)
Q Consensus        20 ~~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~   88 (291)
                      .+..|+|++.+|+  +++.+..||+++|+|+.+...+.++.  +...--+...++  .+.+++.......    .+   .
T Consensus       164 g~~~IDHl~~nv~~~~md~w~~FY~~if~~~~~~~fdi~~p~tgl~Sram~Sp~G--~vrlplN~s~~~~sqi~efl~~y  241 (363)
T COG3185         164 GLTAIDHLTHNVKAGQMDTWVLFYESLFGFREIQYFDIPGPITGLRSRAMVSPCG--KVRLPLNESADDKSQIGEFLREY  241 (363)
T ss_pred             CceeechhhhhcchhhHHHHHHHHHHHhCccceeeEeccCCcccEEEeeEecCCC--cEEeecccCCCchhHHHHHHHHh
Confidence            4689999999987  99999999999999999988776553  111111221222  3445544322211    12   2


Q ss_pred             CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCc
Q 022871           89 IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        89 ~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      .|.||+||+|.++|+-++.++|+++|++....|.
T Consensus       242 ~G~GIQHIA~~T~dI~~tv~~lr~rG~~fl~ip~  275 (363)
T COG3185         242 RGEGIQHIAFGTDDIYATVAALRERGVKFLPIPE  275 (363)
T ss_pred             CCCcceEEEecccHHHHHHHHHHHcCCccCCCch
Confidence            7889999999999999999999999999877554

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.45  E-value=2.3e-06  Score=72.07  Aligned_cols=106  Identities=24%  Similarity=0.334  Sum_probs=69.2

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      .+.-||.|.|+|++++.+||+++|++.. ...    +. . +.+  ++ ... .+-+.+.   .+  ....-.-+|+.++
T Consensus       246 ~~~IfVNLpV~DL~rS~~FYt~LF~~n~-Fsd----e~-a-~cm--~d-tI~-vMllt~~---D~--~~~~evLl~Ls~~  309 (357)
T PRK01037        246 PKTFSVVLEVQDLRRAKKFYSKMFGLEC-WDG----DK-L-FLL--GK-TSL-YLQQTKA---EK--KNRGTTTLSLELE  309 (357)
T ss_pred             CceEEEEeeeCCHHHHHHHHHHHhCCCC-CCC----Cc-c-ccc--cC-cEE-EEEecCC---CC--CCcceEEEEeccC
Confidence            3456999999999999999999988874 221    11 1 122  22 221 2222222   11  1123345678876


Q ss_pred             ---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          102 ---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 ---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                         +++++.++..++|.+...++.+.+. .   --|.|||||.||++..
T Consensus       310 Sre~VD~lv~~A~aaGG~~~~~~~D~Gf-~---rsf~D~DGH~WEi~~~  354 (357)
T PRK01037        310 CEHDFVRFLRRWEMLGGELGEQADGHFP-L---RLVFDLDGHIWVVSCV  354 (357)
T ss_pred             CHHHHHHHHHHHHHcCCCCCCCcccccC-c---ceeECCCCCEEEEEEE
Confidence               4888999999999987666665554 2   3489999999999864

>PRK10148 hypothetical protein; Provisional

Probab=98.34  E-value=7.9e-05  Score=56.33  Aligned_cols=117  Identities=15%  Similarity=0.160  Sum_probs=76.1

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEEEeee---c-----------------CCCceeeEEEecCCCCceeEEEeeccCCCC
Q 022871           27 AVYRVG-DLDRTIKFYTECFGMKLLRKRD---V-----------------PEEKYSNAFLGFGPEQSHFVVELTYNYGVT   85 (291)
Q Consensus        27 v~l~v~-d~~~a~~fy~~~LG~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (291)
                      ..|..+ |.++|++||+++||.++.....   .                 +++...++.+.+++.  .+.+  ... ...
T Consensus         5 pyL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~--~lm~--sD~-~~~   79 (147)
T PRK10148          5 PYLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGS--DIMM--SDA-IPS   79 (147)
T ss_pred             EEEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCE--EEEE--ECC-CCC
Confidence            456665 8999999999999998865431   1                 123455566666532  2222  111 111


Q ss_pred             cccCCCCeeEEEEEeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022871           86 SYDIGTGFGHFAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        86 ~~~~~~g~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                      ....+ .-.++++.++|.++   ++++| +.|.++..++.+..+|.+ +..++||-|+.|.|......+
T Consensus        80 ~~~~~-~~~~l~l~~~d~ee~~~~~~aL-a~gg~v~mpl~~~~wg~~-~g~v~D~fGi~W~l~~~~~~~  145 (147)
T PRK10148         80 GKAHY-SGFTLVLDTQDVEEGKRWFDNL-AANGKIEMAWQETFWAHG-FGKVTDKFGVPWMINVVKQQP  145 (147)
T ss_pred             cCCCC-CeEEEEEECCCHHHHHHHHHHh-hCCCEEEecchhcchhhc-cEEEECCCCCEEEEEecCCCC
Confidence            11111 23466777788776   55656 688999999888888765 488999999999998765443

>PRK10148 hypothetical protein; Provisional

Probab=98.30  E-value=2e-05  Score=59.55  Aligned_cols=115  Identities=16%  Similarity=0.098  Sum_probs=70.5

Q ss_pred             EeeeC-CccccHHHHHhhhCCeeeeeecc---C-----------------CcceeEEEecccCCCceeEEEeeeecCcce
Q 022871          158 MLRVG-DLGRSIKFYEKALGMKLLRTVDK---P-----------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE  216 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~---~-----------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      -|.+. |.+++.+||.++||..+......   +                 ++...-..+..+    +..|-+....+.. 
T Consensus         6 yL~f~g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~----g~~lm~sD~~~~~-   80 (147)
T PRK10148          6 YLSFAGNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIA----GSDIMMSDAIPSG-   80 (147)
T ss_pred             EEEeCCCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEEC----CEEEEEECCCCCc-
Confidence            45664 89999999999999876544311   0                 111111222211    1222222111111 


Q ss_pred             eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                       .......++++.++|.+++ +++.+.| +.|+++..++...++ +.++..++||.|+.|.|...
T Consensus        81 -~~~~~~~~l~l~~~d~ee~-~~~~~aL-a~gg~v~mpl~~~~w-g~~~g~v~D~fGi~W~l~~~  141 (147)
T PRK10148         81 -KAHYSGFTLVLDTQDVEEG-KRWFDNL-AANGKIEMAWQETFW-AHGFGKVTDKFGVPWMINVV  141 (147)
T ss_pred             -CCCCCeEEEEEECCCHHHH-HHHHHHh-hCCCEEEecchhcch-hhccEEEECCCCCEEEEEec
Confidence             1111345788888886554 4444543 689999999999888 46899999999999999764

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=98.16  E-value=6.8e-05  Score=52.91  Aligned_cols=114  Identities=27%  Similarity=0.378  Sum_probs=61.7

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccC-cceeEEEEEecch
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKG-NAYAQVAISTDDV  233 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~-~~~~h~~~~v~di  233 (291)
                      +-.|.|.|-+..++||+++|||++.....      ++.+++....  ...+.|-..+.... ...| --+.++.+.|.+ 
T Consensus         3 ~PvlRVnnR~~ni~FY~~~LGfkll~EEn------a~a~lg~~~~--~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~-   73 (125)
T PF14506_consen    3 IPVLRVNNRDLNIDFYQKTLGFKLLSEEN------ALAILGDQQK--EERLVLEESPSMRTRAVEGPKKLNRIVIKVPN-   73 (125)
T ss_dssp             EEEEEESSHHHHHHHHTTTT--EEEEEET------TEEEEE-TT----EEEEEEE--TTT-B--SSS-SEEEEEEEESS-
T ss_pred             CceEEEcCHHHhHHHHHhccCcEEeeccc------cEEEecCCCC--ceEEEEecCCccccccccCcceeeEEEEEcCC-
Confidence            45789999999999999999999875432      3344442222  33333322221111 1122 367899999998 


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                      .+.++.+    .++|.++...-.   +..++.+-..+|.|.+|.|...++..
T Consensus        74 ~~EIe~L----Lar~~~~~~l~k---g~~gyAfe~vSPEgd~~llhaEdd~~  118 (125)
T PF14506_consen   74 PKEIEAL----LARGAQYDRLYK---GKNGYAFEAVSPEGDRFLLHAEDDIS  118 (125)
T ss_dssp             HHHHHHH----HHC-S--SEEEE----SSSEEEEEE-TT--EEEEE--S-GG
T ss_pred             HHHHHHH----HhcccccceeEE---cCCceEEEEECCCCCEEEEEEcCCHh
Confidence            5666666    677766432222   23357777889999999998876643

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=98.06  E-value=0.00011  Score=54.41  Aligned_cols=117  Identities=18%  Similarity=0.159  Sum_probs=74.8

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce----eccCcceeEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~~  228 (291)
                      .+.+|.+.++|.++...+++ .|||+..-+....+  ..++  +  .+  ...+.+....+...    ..+|++.--++|
T Consensus         9 G~dFvEFa~~~~~~l~~~~~-~lGF~~~a~hrsk~--v~l~--r--QG--~I~~vln~ep~s~a~~~~~~HG~sv~aiaf   79 (139)
T PF14696_consen    9 GFDFVEFAVPDAQALAQLFT-ALGFQPVARHRSKD--VTLY--R--QG--DINFVLNSEPDSFAAEFAAQHGPSVCAIAF   79 (139)
T ss_dssp             EEEEEEEE-SSTTSCHHHHC-CCCEEEECCECCCS--EEEE--E--ET--TEEEEEEEESTSCHHHHHHHHSSEEEEEEE
T ss_pred             CeEEEEEecCCHHHHHHHHH-HhCcceEEecCCcc--eEEE--E--eC--CEEEEEeCCCcchHHHHHHhcCCEEEEEEE
Confidence            57899999999888888885 59999876554332  2333  2  11  33444433222110    226789999999


Q ss_pred             EecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      .|+|..++++++    .+.|.+.+..|.....  ...--++-+.|.++-|+++...
T Consensus        80 rV~Da~~A~~rA----~~~GA~~~~~~~~~~e--~~~paI~g~G~sl~yfVdr~~~  129 (139)
T PF14696_consen   80 RVDDAAAAYERA----VALGAEPVQEPTGPGE--LNIPAIRGIGGSLHYFVDRYGD  129 (139)
T ss_dssp             EES-HHHHHHHH----HHTT--EEEEEEETT---BEEEEEE-CCC-EEEEEE--SS
T ss_pred             EeCCHHHHHHHH----HHcCCcCcccCCCCCc--EeeeeEEccCCCEEEEEecCCC
Confidence            999999999999    9999998777643221  3667789999999999998654

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=97.73  E-value=0.00018  Score=56.23  Aligned_cols=87  Identities=23%  Similarity=0.308  Sum_probs=49.9

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcc--eeEEEecccCCCceeEEEeeeecCccee------------cc
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVTEY------------TK  219 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~~------------~~  219 (291)
                      |+|+.+.|+|++++.++|++.|||.+.....-+..+  -.++.++  +    ..|||....+....            ..
T Consensus         1 lDH~v~~v~dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~--~----~YlEli~i~~~~~~~~~~~~~~~~~~~~   74 (175)
T PF13468_consen    1 LDHLVIAVRDLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFG--D----GYLELIAIDPEAPAPDRGRWFGLDRLAG   74 (175)
T ss_dssp             EEEEEEE-TTGGG----GGGS--S--EEEEE-TTT-EEEEEEE-S--S----SEEEEEEES-HHHSTGGGT-TTTHHHHT
T ss_pred             CCEEEEEcCCHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeC--C----ceEEEEEeCCcccccccccceechhhcC
Confidence            689999999999999999889999988655444311  2344443  2    26777664322211            13


Q ss_pred             CcceeEEEEEecchhhhHHHHHHHHHHhCCe
Q 022871          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGK  250 (291)
Q Consensus       220 ~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~  250 (291)
                      +.++.+++|.++|++++.+++    .+.|+.
T Consensus        75 ~~g~~~~~l~t~d~~~~~~~l----~~~G~~  101 (175)
T PF13468_consen   75 GEGLYGWALRTDDIEAVAARL----RAAGLD  101 (175)
T ss_dssp             --EEEEEEEE-S-HHHHHHHH----HTTT-E
T ss_pred             CCCeEEEEEecCCHHHHHHHH----HhcCCC
Confidence            568899999999999999999    999975

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.79  E-value=0.057  Score=38.98  Aligned_cols=99  Identities=21%  Similarity=0.196  Sum_probs=52.3

Q ss_pred             CCccccHHHHHhhhCCeeeee-eccCC------cceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchh
Q 022871          162 GDLGRSIKFYEKALGMKLLRT-VDKPE------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVY  234 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~  234 (291)
                      .+.+++.+||.++||-..... ...++      .......+...    +..+-.....  .....+++ ..+++.++| .
T Consensus        11 g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~----g~~lm~~D~~--~~~~~~~~-~sl~i~~~~-~   82 (116)
T PF06983_consen   11 GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIG----GQKLMASDGG--PDFPFGNN-ISLCIECDD-E   82 (116)
T ss_dssp             S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEET----TEEEEEEEES--TS----TT-EEEEEEESS-H
T ss_pred             CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEEC----CeEEEEECCC--CCCCCCCc-EEEEEEcCC-H
Confidence            689999999999999432222 11111      11111111111    1222222211  12222333 668889988 5


Q ss_pred             hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          235 KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       235 ~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      +.+++++++|.+.|-         ++ + ++..++|..|..|.|+
T Consensus        83 ee~~~~f~~Ls~gG~---------~~-~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   83 EEIDRIFDKLSEGGQ---------WF-S-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             HHHHHHHHHHHTTTE---------TC-C-EEEEEE-TTS-EEEEE
T ss_pred             HHHHHHHHHHHcCCC---------cc-c-eeEEEEeCCCCEEEeC
Confidence            666777777676554         22 3 8899999999999885

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=96.35  E-value=0.21  Score=36.03  Aligned_cols=101  Identities=20%  Similarity=0.425  Sum_probs=54.5

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEE-eeecCC------CceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLR-KRDVPE------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |+.+. .+-++|.+||.++||-..+. ....++      +...++.+.+++.  .+..  ... . ..+..+++ .++++
T Consensus         6 yL~F~-g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~--~lm~--~D~-~-~~~~~~~~-~sl~i   77 (116)
T PF06983_consen    6 YLWFN-GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQ--KLMA--SDG-G-PDFPFGNN-ISLCI   77 (116)
T ss_dssp             EEEES-S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTE--EEEE--EEE-S-TS----TT-EEEEE
T ss_pred             EEEeC-CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCe--EEEE--ECC-C-CCCCCCCc-EEEEE
Confidence            44443 68999999999999854333 233222      2334444555322  1211  111 1 22233334 46777


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      ..+|   ++.++++|.+.|-         + .. .+..+.|.-|..|.|+
T Consensus        78 ~~~~~ee~~~~f~~Ls~gG~---------~-~~-~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   78 ECDDEEEIDRIFDKLSEGGQ---------W-FS-RYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EESSHHHHHHHHHHHHTTTE---------T-CC-EEEEEE-TTS-EEEEE
T ss_pred             EcCCHHHHHHHHHHHHcCCC---------c-cc-eeEEEEeCCCCEEEeC
Confidence            8776   4556778888774         2 23 4678999999998875

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=96.25  E-value=0.0069  Score=41.90  Aligned_cols=92  Identities=17%  Similarity=0.206  Sum_probs=39.8

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec--
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--  231 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~--  231 (291)
                      +..+.|+|+| +++..||.++||-...         ..+.+....    +..+.+ .+      ..-=++-.+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~~---------~~l~f~ea~----G~DL~~-~~------~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQLP---------FFLTFQEAQ----GPDLTI-EN------NETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHHT---------TTEEEEE-------CCGSS--T------TSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCCC---------ceEEEeecc----CCcccc-CC------CcEEeeEEEEEEecCc
Confidence            4578999999 8899999998873211         122222211    111111 00      00015667888998  


Q ss_pred             -chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEE
Q 022871          232 -DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       232 -di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel  278 (291)
                       |+.++.+++    .+  ..+..+ +     ..+++.++||++..|+|
T Consensus        65 ~Dl~~L~~~l----e~--~~~fid-K-----k~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHL----EE--QEFFID-K-----KEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHT----TT--S-EE---T-----T-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHh----cc--cceEec-C-----CceEEEEECCcceEEEe
Confidence             445555555    55  333222 2     24899999999999987

>PF15067 FAM124: FAM124 family

Probab=96.14  E-value=0.076  Score=42.47  Aligned_cols=104  Identities=14%  Similarity=0.167  Sum_probs=61.5

Q ss_pred             eeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEec-CCCCceeEEEeecc-CCCCcccCCCCeeEEEE
Q 022871           23 RFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-GPEQSHFVVELTYN-YGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        23 ~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~g~~~i~~   98 (291)
                      -+-.++|.|+  |.+.+.+||+-+|+-+.......      .+++.+ .+.+..+.+.+..- .+..+.  ...-.-+.|
T Consensus       128 EilRftly~~~~N~~d~vr~Yelil~~~~~~~k~~------FC~F~lys~~~~~iQlsLK~lp~~~~p~--p~esavLqF  199 (236)
T PF15067_consen  128 EILRFTLYCSFDNYEDMVRFYELILQREPTQQKED------FCFFTLYSQPGLDIQLSLKQLPPGMSPE--PTESAVLQF  199 (236)
T ss_pred             cEEEEEEEecCCCHHHHHHHHHHHhccCcceeeCC------cEEEEEecCCCeEEEEEeccCCCCCCcc--cccceEEEE
Confidence            4567889999  99999999999999988655431      344433 23333333443221 111111  112245679


Q ss_pred             EeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEE
Q 022871           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                      .|.|+..+...|-.--..       +..+.   .-..|||||.|-+
T Consensus       200 ~V~~igqLvpLLPnpc~P-------IS~~r---WqT~D~DGNkILL  235 (236)
T PF15067_consen  200 RVEDIGQLVPLLPNPCSP-------ISETR---WQTEDYDGNKILL  235 (236)
T ss_pred             EecchhhhcccCCCCccc-------ccCCc---ceeeCCCCCEecc
Confidence            999998876654433211       11122   3479999998843

>PF15067 FAM124: FAM124 family

Probab=93.66  E-value=1.5  Score=35.26  Aligned_cols=125  Identities=14%  Similarity=0.126  Sum_probs=69.0

Q ss_pred             EEEECCCCCEEEEEeCCCCCCCceeEEeeeC--CccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEee
Q 022871          132 AFVKDPDGYIFELIQRGPTPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT  209 (291)
Q Consensus       132 ~~~~dp~G~~iel~~~~~~~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~  209 (291)
                      +|-.+|+-=+|.+- ..--...+..++|.|+  |.+.+.+||+-+|+=+....  ..+.  -++.+- ...  +..+++.
T Consensus       108 fysl~~~~PlWavr-~VH~G~EilRftly~~~~N~~d~vr~Yelil~~~~~~~--k~~F--C~F~ly-s~~--~~~iQls  179 (236)
T PF15067_consen  108 FYSLDPGMPLWAVR-QVHYGKEILRFTLYCSFDNYEDMVRFYELILQREPTQQ--KEDF--CFFTLY-SQP--GLDIQLS  179 (236)
T ss_pred             ceecCCCCceeEEe-eeeccccEEEEEEEecCCCHHHHHHHHHHHhccCccee--eCCc--EEEEEe-cCC--CeEEEEE
Confidence            34445533334333 2234566788999998  99999999999999765332  2222  222221 122  3444443


Q ss_pred             eecCcc-eeccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEE
Q 022871          210 YNYGVT-EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVL  278 (291)
Q Consensus       210 ~~~~~~-~~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel  278 (291)
                      -..-+. ..+......-+.|.|.|+-+++.-+     =+..   .+..+      ...-..|+|||.|-|
T Consensus       180 LK~lp~~~~p~p~esavLqF~V~~igqLvpLL-----Pnpc---~PIS~------~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  180 LKQLPPGMSPEPTESAVLQFRVEDIGQLVPLL-----PNPC---SPISE------TRWQTEDYDGNKILL  235 (236)
T ss_pred             eccCCCCCCcccccceEEEEEecchhhhcccC-----CCCc---ccccC------CcceeeCCCCCEecc
Confidence            321111 1122224467899999988877766     1121   11111      224579999999843

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=93.05  E-value=0.41  Score=33.27  Aligned_cols=92  Identities=15%  Similarity=0.221  Sum_probs=39.8

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC--
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE--  101 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~--  101 (291)
                      +..+.|+|+| +++..||.++||-..      +   ..+.+.. +.+. .+         ..+....-++..+-|.|+  
T Consensus         6 ~e~i~LNV~d-~~~~~fy~~~f~~~~------~---~~l~f~e-a~G~-DL---------~~~~~~twDLe~Lkf~V~~~   64 (101)
T PF14507_consen    6 FESIELNVPD-AKSQSFYQSIFGGQL------P---FFLTFQE-AQGP-DL---------TIENNETWDLEMLKFQVPKD   64 (101)
T ss_dssp             E-EEEEEE-T--T---S--H---HHH------T---TTEEEEE----C-CG---------SS-TTSBSSEEEEEEEES-S
T ss_pred             EEEEEEeCCC-hhHHHHHHhccccCC------C---ceEEEee-ccCC-cc---------ccCCCcEEeeEEEEEEecCc
Confidence            5679999999 889999999886211      0   0011111 0000 00         001112235667778887  


Q ss_pred             -CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEE
Q 022871          102 -DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL  144 (291)
Q Consensus       102 -d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel  144 (291)
                       |+.++.+++.+.++  --+      ....++.+.||.|.-+-+
T Consensus        65 ~Dl~~L~~~le~~~~--fid------Kk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   65 FDLAALKSHLEEQEF--FID------KKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             --HHHHHHHTTTS-E--E--------TT-SEEEEE-TTS-EEEE
T ss_pred             ccHHHHHHHhcccce--Eec------CCceEEEEECCcceEEEe
Confidence             68888899888443  111      122357789999976644

>PRK11700 hypothetical protein; Provisional

Probab=84.85  E-value=14  Score=28.88  Aligned_cols=77  Identities=13%  Similarity=0.104  Sum_probs=44.9

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEec------CCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF------GPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      ..++||.+.|++.+.|.+|-+..+.+--.-....-.| ..++.+.+      ++... -.++++.+..  ....-.|+-|
T Consensus        38 ~~~DHialR~n~~~tAe~w~~~l~~~G~llSen~ING-RPI~l~~L~qPl~~~~w~I-~cvELP~P~~--k~Yp~eGWEH  113 (187)
T PRK11700         38 LEADHIALRCNQNETAERWRQGFLQCGELLSENIING-RPICLFELDQPLQVGHWSI-DCVELPYPGE--KRYPHEGWEH  113 (187)
T ss_pred             ccCcEEEEeeCCHHHHHHHHHHHHHhchhhhccccCC-eeEEEEEcCCCceeCCcEE-EEEEeCCCCC--CCCCCCCceE
Confidence            4579999999999999999988775433322211122 23444433      22111 1245554432  2234458999


Q ss_pred             EEEEeCC
Q 022871           96 FAIATED  102 (291)
Q Consensus        96 i~~~v~d  102 (291)
                      |-+.++.
T Consensus       114 IElVlp~  120 (187)
T PRK11700        114 IELVLPG  120 (187)
T ss_pred             EEEEecC
Confidence            9988863

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=82.44  E-value=18  Score=26.95  Aligned_cols=43  Identities=16%  Similarity=0.146  Sum_probs=32.1

Q ss_pred             EEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       226 ~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +-+.++| .+..+++++.|...|.+.           ....+++|-.|..|.|+-
T Consensus        81 ~~v~~~~-q~E~Drlwnal~~~g~e~-----------~~cgW~kDKfGVSWQi~p  123 (151)
T COG3865          81 FQVACDD-QEEIDRLWNALSDNGGEA-----------EACGWLKDKFGVSWQIVP  123 (151)
T ss_pred             EEEEcCC-HHHHHHHHHHHhccCcch-----------hcceeEecccCcEEEEcH
Confidence            4445566 777788878778888621           256789999999999973

>PF06185 YecM: YecM protein; InterPro: IPR010393 This family consists of several bacterial YecM proteins of unknown function

Probab=80.99  E-value=25  Score=27.57  Aligned_cols=85  Identities=15%  Similarity=0.169  Sum_probs=43.3

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEec------CCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF------GPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      -.++||+++|++.+.+.++-+..+.+-..-....-.|+ .++.+.+      ++... -.++++.+..  ....-.|+-|
T Consensus        33 ~~~DHialRvn~~~~A~~~~~~l~~~G~llSen~INGR-PI~l~~L~qPL~~~~~~I-~~vELP~P~~--K~Yp~eGWEH  108 (185)
T PF06185_consen   33 YEIDHIALRVNSNETAERWKQALLQCGELLSENMINGR-PICLFKLNQPLQFGGWSI-DCVELPYPKD--KRYPQEGWEH  108 (185)
T ss_dssp             -EEEEEEEE-S-HHHHHHHHHHHTTTEEEEEEEEETTE-EEEEEEEEEEEEETTEEE-EEEEEE---S--S--SS-EEEE
T ss_pred             cCCcEEEEecCCHHHHHHHHHHHHHhChhhhhceeCCe-eEEEEEcCCchhcCCeeE-EEEEeCCCCC--CCCCCCCceE
Confidence            46899999999999999999998866544332222221 2333322      22221 2355654433  2224459999


Q ss_pred             EEEEeCC-HHHHHHHH
Q 022871           96 FAIATED-VYKLVENI  110 (291)
Q Consensus        96 i~~~v~d-~~~~~~~l  110 (291)
                      |-|-++. ..+..+++
T Consensus       109 IE~Vip~~~~~~~~~~  124 (185)
T PF06185_consen  109 IEFVIPSDAQTLLEQA  124 (185)
T ss_dssp             EEEE--S-GGGHHHHH
T ss_pred             EEEEecCCHHHHHHHH
Confidence            9999863 33344443

; PDB: 1K4N_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	291
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		4e-39
1f9z_A	135	Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I		2e-29
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		7e-32
2c21_A	144	Specificity Of The Trypanothione-Dependednt Leishma		3e-21
3zi1_A	330	Crystal Structure Of Human Glyoxalase Domain-contai		2e-24
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		5e-12
2za0_A	184	Crystal Structure Of Mouse Glyoxalase I Complexed W		1e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		1e-11
1fro_A	183	Human Glyoxalase I With Benzyl-Glutathione Inhibito		4e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		1e-11
3vw9_A	187	Human Glyoxalase I With An N-Hydroxypyridone Inhibi		2e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		3e-11
1bh5_A	183	Human Glyoxalase I Q33e, E172q Double Mutant Length		9e-11
3bqx_A	150	High Resolution Crystal Structure Of A Glyoxalase-R		5e-04

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  158 bits (399), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 73/124 (58%), Positives = 92/124 (74%)
Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61
Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121
Query: 143 ELIQ 146
           ELI+
Sbjct: 122 ELIE 125

>pdb|1F9Z|A Chain A, Crystal Structure Of The Ni(Ii)-Bound Glyoxalase I From Escherichia Coli Length = 135

Iteration: 1
 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 63/130 (48%), Positives = 85/130 (65%), Gaps = 4/130 (3%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           L   MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+G
Sbjct: 3   LLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWG 62
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           V +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG
Sbjct: 63  VDKYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDG 118
Query: 274 WKTVLVDNED 283
           +K  L++ +D
Sbjct: 119 YKIELIEEKD 128

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score =  134 bits (337), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 69/125 (55%), Positives = 84/125 (67%), Gaps = 5/125 (4%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 7   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 66
Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           YGVTSY     +GH AI  EDV +LV ++R     +  E       +  +AFV DPDGY 
Sbjct: 67  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYY 121
Query: 142 FELIQ 146
            EL+ 
Sbjct: 122 IELLN 126

>pdb|2C21|A Chain A, Specificity Of The Trypanothione-Dependednt Leishmania Major Glyoxalase I: Structure And Biochemical Comparison With The Human Enzyme Length = 144

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           +   M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYG
Sbjct: 9   MLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYG 68
Query: 214 VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQ--PGSIPGLNTKITSFVDP 271
           VT Y    AY  +AI  +DV           +EL   + +   P      +  +   VDP
Sbjct: 69  VTSYKHDEAYGHIAIGVEDV-----------KELVADMRKHDVPIDYEDESGFMAFVVDP 117
Query: 272 DGWKTVLVDNEDFLKEIQSE 291
           DG+   L++ +  +++ +++
Sbjct: 118 DGYYIELLNEKTMMEKAEAD 137

>pdb|3ZI1|A Chain A, Crystal Structure Of Human Glyoxalase Domain-containing Protein 4 (glod4) Length = 330

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 131/286 (45%), Gaps = 51/286 (17%)
Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----------KYSNAFLGFGPE 70
           RR LH V++VG+  +T +FY +  GMK+LR  +  E            K+S   +GFGPE
Sbjct: 26  RRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPE 85
Query: 71  QSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH 130
             HFV ELTYNYGV  Y +G  F    +A+    + V N R       +   PL      
Sbjct: 86  DDHFVAELTYNYGVGDYKLGNDFMGITLASS---QAVSNAR-------KLEWPLTEVAEG 135
Query: 131 IAFVKDPDGYIFELIQRG-PTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK 189
           +   + P GY F L  R  P  +P+ +V L V DL +S+ ++   LGMK+    ++ +  
Sbjct: 136 VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVSDLQKSLNYWCNLLGMKIYENDEEKQR- 194
Query: 190 YTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--------DDVYKSAE--- 238
              A+LGYA  D    LEL    G  ++    A+ ++A S         +D+ K      
Sbjct: 195 ---ALLGYA--DNQCKLELQGVKGGVDHAA--AFGRIAFSCPQKELPDLEDLMKRENQKI 247
Query: 239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF 284
           +  LV+ +  GK T Q          +    DPDG +   V +E F
Sbjct: 248 LTPLVSLDTPGKATVQ----------VVILADPDGHEICFVGDEAF 283

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 32/158 (20%)
Query: 17  PKKDKRRFL--HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF------- 67
           P    + FL    + R+ D  +++ FYT   G+ LL+K D P  K+S  FL +       
Sbjct: 23  PDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIP 82
Query: 68  --GPEQSHF------VVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENI 110
               E++ +       +ELT+N+G       SY  G     GFGH  IA  DVY   +  
Sbjct: 83  KDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF 142
Query: 111 RAKGGNVTREP--GPLKGGTTHIAFVKDPDGYIFELIQ 146
              G    ++P  G +KG    +AF++DPDGY  E++ 
Sbjct: 143 EELGVKFVKKPDDGKMKG----LAFIQDPDGYWIEILN 176

>pdb|2ZA0|A Chain A, Crystal Structure Of Mouse Glyoxalase I Complexed With Methyl-Gerfelin Length = 184

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G T     +   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           + LL+ +D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 165
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 166 DPDGYWIEILNPNK 179

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------------- 72
             + RV D  +++ FYT   GM L++K D P  K+S  FL +  +               
Sbjct: 33  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 92
Query: 73  --HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P
Sbjct: 93  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 152
Query: 122 --GPLKGGTTHIAFVKDPDGYIFELIQ 146
             G +KG    +AF++DPDGY  E++ 
Sbjct: 153 DDGKMKG----LAFIQDPDGYWIEILN 175

>pdb|1FRO|A Chain A, Human Glyoxalase I With Benzyl-Glutathione Inhibitor Length = 183

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P  GG T    ++   D D    + +        L Q MLRV D  +S+ FY + LG
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFYTRVLG 53
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           M L++  D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS 113
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 114 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 164
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 165 DPDGYWIEILNPNK 178

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 30/147 (20%)
Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS------------- 72
             + RV D  +++ FYT   GM L++K D P  K+S  FL +  +               
Sbjct: 37  QTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWAL 96
Query: 73  --HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P
Sbjct: 97  SRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKP 156
Query: 122 --GPLKGGTTHIAFVKDPDGYIFELIQ 146
             G +KG    +AF++DPDGY  E++ 
Sbjct: 157 DDGKMKG----LAFIQDPDGYWIEILN 179

>pdb|3VW9|A Chain A, Human Glyoxalase I With An N-Hydroxypyridone Inhibitor Length = 187

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 48/199 (24%)
Query: 115 GNVTREPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFY 171
           G+   EP P  GG T    ++   D D    + +        L Q MLRV D  +S+ FY
Sbjct: 1   GSHMAEPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQQTMLRVKDPKKSLDFY 52
Query: 172 EKALGMKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE 216
            + LGM L++  D P  K++L  L Y +++               +   LELT+N+G  +
Sbjct: 53  TRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED 112
Query: 217 -----YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKI 265
                Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL    
Sbjct: 113 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL---- 164
Query: 266 TSFV-DPDG-WKTVLVDNE 282
            +F+ DPDG W  +L  N+
Sbjct: 165 -AFIQDPDGYWIEILNPNK 182

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 30/145 (20%)
Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS--------------- 72
           + RV D  +++ FYT   GM L++K D P  K+S  FL +  +                 
Sbjct: 35  MLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSR 94
Query: 73  HFVVELTYNYG-----VTSYDIGT----GFGHFAIATEDVYKLVENIRAKGGNVTREP-- 121
              +ELT+N+G       SY  G     GFGH  IA  DVY   +     G    ++P  
Sbjct: 95  KATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD 154
Query: 122 GPLKGGTTHIAFVKDPDGYIFELIQ 146
           G +KG    +AF++DPDGY  +++ 
Sbjct: 155 GKMKG----LAFIQDPDGYWIQILN 175

>pdb|1BH5|A Chain A, Human Glyoxalase I Q33e, E172q Double Mutant Length = 183

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 48/194 (24%)
Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P  GG T    ++   D D    + +        L + MLRV D  +S+ FY + LG
Sbjct: 2   EPQPPSGGLTDEAALSCCSDADPSTKDFL--------LQETMLRVKDPKKSLDFYTRVLG 53
Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           M L++  D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 54  MTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTEDDETQS 113
Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQP--GSIPGLNTKITSFV- 269
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P  G + GL     +F+ 
Sbjct: 114 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKMKGL-----AFIQ 164
Query: 270 DPDG-WKTVLVDNE 282
           DPDG W  +L  N+
Sbjct: 165 DPDGYWIQILNPNK 178

>pdb|3BQX|A Chain A, High Resolution Crystal Structure Of A Glyoxalase-Related Enzyme From Fulvimarina Pelagi Length = 150

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKY--SNAFLGFGPEQSHFVVELTYNYG--VTS 86
           +GDL+ + +FY E FG   + +   PE  +   N F+      +  V  L  + G  VTS
Sbjct: 13  IGDLEASARFYGEGFGWAPVFRN--PEIIFYQXNGFV----LATWLVQNLQEDVGVAVTS 66
Query: 87  YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFVKDPDGYIFEL 144
                   H   A  +V  L E + A GG + R    P  GG     +V DPDG+I+E+
Sbjct: 67  RPGSXALAHNVRAETEVAPLXERLVAAGGQLLRPADAPPHGGLR--GYVADPDGHIWEI 123

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	291
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	3e-62
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	8e-37
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-61
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	3e-37
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-45
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	2e-32
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	2e-39
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	5e-20
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	3e-36
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	1e-19
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-34
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	2e-16
2p25_A	126	Glyoxalase family protein; structural genomics, MC	4e-33
2p25_A	126	Glyoxalase family protein; structural genomics, MC	3e-15
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	4e-33
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	5e-12
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	5e-07
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	5e-31
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	9e-17
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	4e-29
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	3e-16
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	1e-26
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	2e-10
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	1e-26
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	3e-13
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	5e-25
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	2e-11
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	7e-24
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	9e-23
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	2e-10
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	5e-20
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	8e-06
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	2e-19
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	6e-15
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	3e-19
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	8e-06
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	6e-19
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	3e-17
3huh_A	152	Virulence protein STM3117; structural genomics, ny	5e-18
3huh_A	152	Virulence protein STM3117; structural genomics, ny	9e-06
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	2e-17
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	6e-05
3ghj_A	141	Putative integron gene cassette protein; integron	7e-17
3ghj_A	141	Putative integron gene cassette protein; integron	5e-05
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	8e-17
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	7e-07
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	3e-16
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	6e-04
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	5e-16
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	3e-05
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	8e-16
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	2e-05
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-15
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-05
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	1e-14
1nki_A	135	Probable fosfomycin resistance protein; potassium	4e-04
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	1e-14
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	2e-09
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	2e-14
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	6e-07
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	3e-14
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	8e-06
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-14
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-07
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	6e-14
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	9e-05
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	6e-14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-14
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	7e-09
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	7e-14
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	9e-05
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	1e-13
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	4e-04
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	3e-13
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	4e-04
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	3e-13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	4e-13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	6e-06
3eck_A	365	Protein (homoprotocatechuate 2,3-dioxygenase); oxi	5e-13
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	6e-13
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	1e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	4e-12
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	3e-08
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-11
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	5e-05
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	2e-11
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	4e-04
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-11
2i7r_A	118	Conserved domain protein; structural genomics cons	1e-06
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	3e-11
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	5e-04
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	7e-11
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	6e-06
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	1e-10
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	2e-10
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	5e-10
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-09
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	1e-07
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-09
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	4e-04
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-08
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	1e-04
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	3e-08
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	3e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	3e-08
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	2e-04
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	6e-08
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	7e-08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	1e-07
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	9e-04
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	1e-07
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	6e-07
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	9e-07
1xy7_A	166	Unknown protein; structural genomics, protein stru	2e-06
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	7e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	2e-04
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	2e-04

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  192 bits (490), Expect = 3e-62
 Identities = 72/143 (50%), Positives = 87/143 (60%), Gaps = 5/143 (3%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTY
Sbjct: 6   SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTY 65

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
           NYGVTSY     +GH AI  EDV +LV ++R     +  E       +  +AFV DPDGY
Sbjct: 66  NYGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYED-----ESGFMAFVVDPDGY 120

Query: 141 IFELIQRGPTPEPLCQVMLRVGD 163
             EL+      E     M   G 
Sbjct: 121 YIELLNEKTMMEKAEADMKEQGT 143

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1 Length = 144

 Score =  127 bits (320), Expect = 8e-37
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 9/136 (6%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT
Sbjct: 11  HTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVT 70

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 275
            Y    AY  +AI  +DV +    +    ++    I  +  S       +   VDPDG+ 
Sbjct: 71  SYKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDES-----GFMAFVVDPDGYY 121

Query: 276 TVLVDNEDFLKEIQSE 291
             L++ +  +++ +++
Sbjct: 122 IELLNEKTMMEKAEAD 137

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  189 bits (482), Expect = 3e-61
 Identities = 74/132 (56%), Positives = 93/132 (70%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A Length = 135

 Score =  128 bits (323), Expect = 3e-37
 Identities = 62/133 (46%), Positives = 86/133 (64%), Gaps = 4/133 (3%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
             MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV 
Sbjct: 5   HTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVD 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 275
           +Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K
Sbjct: 65  KYELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYK 120

Query: 276 TVLVDNEDFLKEI 288
             L++ +D  + +
Sbjct: 121 IELIEEKDAGRGL 133

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  150 bits (380), Expect = 2e-45
 Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 34/186 (18%)

Query: 1   MAEASPAAA---NAELLEW-----PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK 52
           MAE  PA++   +           P          + R+ D  +++ FYT   G+ LL+K
Sbjct: 1   MAEPQPASSGLTDETAFSCCSDPDPSTKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQK 60

Query: 53  RDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNYGV-----TSYDIG-- 90
            D P  K+S  FL +  +                    +ELT+N+G       SY  G  
Sbjct: 61  LDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQSYHNGNS 120

Query: 91  --TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
              GFGH  IA  DVY   +     G    ++P    G    +AF++DPDGY  E++   
Sbjct: 121 DPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDD--GKMKGLAFIQDPDGYWIEILNPN 178

Query: 149 PTPEPL 154
                +
Sbjct: 179 KIATII 184

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* Length = 184

 Score =  117 bits (294), Expect = 2e-32
 Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 43/197 (21%)

Query: 120 EPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALG 176
           EP P   G T     +   DPD    + +        L Q MLR+ D  +S+ FY + LG
Sbjct: 3   EPQPASSGLTDETAFSCCSDPDPSTKDFL--------LQQTMLRIKDPKKSLDFYTRVLG 54

Query: 177 MKLLRTVDKPEYKYTLAMLGYAEED---------------QTTVLELTYNYGVTE----- 216
           + LL+ +D P  K++L  L Y +++               +   LELT+N+G  +     
Sbjct: 55  LTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTEDDETQS 114

Query: 217 YTKGNA----YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DP 271
           Y  GN+    +  + I+  DVY + +      +ELG K  ++P        K  +F+ DP
Sbjct: 115 YHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGK---MKGLAFIQDP 167

Query: 272 DGWKTVLVDNEDFLKEI 288
           DG+   +++       I
Sbjct: 168 DGYWIEILNPNKIATII 184

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score =  134 bits (339), Expect = 2e-39
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 6/137 (4%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H    V  +   + FY     +KLL   D+P +    AFL  G  +   +  L+   
Sbjct: 8   KLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEES 67

Query: 83  GVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHIAFV--KDP 137
            +  +    G G  H AI  + + + ++ ++  G  +   EP P   G   +AF+  +  
Sbjct: 68  PIAKFIQKRGEGIHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSA 126

Query: 138 DGYIFELIQRGPTPEPL 154
            G ++E  ++    E L
Sbjct: 127 RGVLYEFCEKKEQAENL 143

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans} Length = 161

 Score = 83.7 bits (207), Expect = 5e-20
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 9/119 (7%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            + + V  +   + FY  +L +KLL   D P     +A L   E     +  L+    + 
Sbjct: 11  HIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIA 70

Query: 216 EYTK--GNAYAQVAISTDDVYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDP 271
           ++ +  G     +AI    + +  + V    +E G + I  +P   PG      +F+ P
Sbjct: 71  KFIQKRGEGIHHIAIGVKSIEERIQEV----KENGVQMINDEPV--PGARGAQVAFLHP 123

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score =  125 bits (316), Expect = 3e-36
 Identities = 28/131 (21%), Positives = 50/131 (38%), Gaps = 7/131 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H    V DL++   FY    G ++     +PE   S  F+  G  +   +  L  +
Sbjct: 4   GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLD 63

Query: 82  YGVTSY---DIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHIAFV--K 135
             +  +   +   G  H  I  +++   V +++ K     + E      G   + F+  K
Sbjct: 64  SPIAGFLQKNKAGGMHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGKP-VIFLHPK 122

Query: 136 DPDGYIFELIQ 146
           D  G + EL Q
Sbjct: 123 DCGGVLVELEQ 133

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} Length = 134

 Score = 81.7 bits (202), Expect = 1e-19
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            V + V DL ++  FY+  LG ++   V  PE+  ++  +         +  L  +  + 
Sbjct: 8   HVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIA 67

Query: 216 EY---TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV--- 269
            +    K      + I  D++  +   +    ++   +   +   I      +  F+   
Sbjct: 68  GFLQKNKAGGMHHICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVI-FLHPK 122

Query: 270 DPDG 273
           D  G
Sbjct: 123 DCGG 126

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score =  120 bits (303), Expect = 2e-34
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVE 77
           +   H    V D D++ +FY    G +++R+   P+       L  G  +       + +
Sbjct: 4   KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTD 63

Query: 78  LTYNYGVTSYDI---GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAF 133
             Y              G  H A   EDV    + + A G  +  E       T   +AF
Sbjct: 64  SNYCAPPERISWPREACGLRHLAFYVEDVEASRQELIALG--IRVEEVRYDDYTGKKMAF 121

Query: 134 VKDPDGYIFELIQ 146
             DPDG   EL +
Sbjct: 122 FFDPDGLPLELHE 134

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans} Length = 134

 Score = 73.2 bits (180), Expect = 2e-16
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 12/124 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY----AEEDQTTVLELTYNY 212
           V L V D  +S +FY   LG +++R   +P+       L       E     + +  Y  
Sbjct: 9   VALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCA 68

Query: 213 GVTEYTKGNAYAQ---VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 269
                +          +A   +DV  S + +      LG ++            K+  F 
Sbjct: 69  PPERISWPREACGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYD-DYTGKKMAFFF 123

Query: 270 DPDG 273
           DPDG
Sbjct: 124 DPDG 127

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score =  117 bits (294), Expect = 4e-33
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      +   T  FY E  G ++LR+   PE+      L  G ++          
Sbjct: 4   KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEI-FISDQF 62

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGT-THIAFVKDPDGY 140
               SY    G  H A   E + +++  +  +G  +  EP  +   T   + F  DPDG 
Sbjct: 63  PARPSYPEALGLRHLAFKVEHIEEVIAFLNEQG--IETEPLRVDDFTGKKMTFFFDPDGL 120

Query: 141 IFELIQ 146
             EL +
Sbjct: 121 PLELHE 126

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis} Length = 126

 Score = 69.8 bits (171), Expect = 3e-15
 Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 6/117 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V +   +   +  FY + LG ++LR   +PE       L      +  +           
Sbjct: 9   VAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLG-SQELEIFISDQFPARPS 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           Y +      +A   + + +    +     E G +             K+T F DPDG
Sbjct: 68  YPEALGLRHLAFKVEHIEEVIAFL----NEQGIETEPLRVD-DFTGKKMTFFFDPDG 119

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score =  121 bits (306), Expect = 4e-33
 Identities = 53/255 (20%), Positives = 77/255 (30%), Gaps = 36/255 (14%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTSYD 88
             D     KFYT  FG        VP     YS A L         V  +          
Sbjct: 40  TTDQSAAKKFYTSLFGWGY-DDNPVPGGGGVYSMATLNGEA-----VAAIAPMPPGAPEG 93

Query: 89  IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
           +   +  + IA +DV  +V+ +   GG V      + G    ++F+ DP G    L Q  
Sbjct: 94  MPPIWNTY-IAVDDVDAVVDKVVPGGGQVMMPAFDI-GDAGRMSFITDPTGAAVGLWQAN 151

Query: 149 P--------TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE 200
                        L    L       ++ FYE  +G+            Y +   G AE 
Sbjct: 152 RHIGATLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV 211

Query: 201 DQTTVLELTYNYGVTEYTKGN--AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI 258
                       G  E        +  V  + DD   +A          GG++  +P  I
Sbjct: 212 -----------GGCMEPPMPGVPNHWHVYFAVDDADATAAKA----AAAGGQVIAEPADI 256

Query: 259 PGLNTKITSFVDPDG 273
           P    +     DP G
Sbjct: 257 PS-VGRFAVLSDPQG 270

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 63.8 bits (155), Expect = 5e-12
 Identities = 23/136 (16%), Positives = 37/136 (27%), Gaps = 14/136 (10%)

Query: 16  WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV 75
               +    +         D  + FY    G+          + Y     G         
Sbjct: 157 TLVNETGTLIWNELLTDKPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEV----- 211

Query: 76  VELTYNYGVTSYDIGTGFGHFAI--ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
                  G     +     H+ +  A +D         A GG V  EP  +       A 
Sbjct: 212 ------GGCMEPPMPGVPNHWHVYFAVDDADATAAKAAAAGGQVIAEPADIPSV-GRFAV 264

Query: 134 VKDPDGYIFELIQRGP 149
           + DP G IF +++  P
Sbjct: 265 LSDPQGAIFSVLKAAP 280

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis} Length = 282

 Score = 49.2 bits (117), Expect = 5e-07
 Identities = 21/115 (18%), Positives = 34/115 (29%), Gaps = 10/115 (8%)

Query: 159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYT 218
           L+  D   + KFY    G         P      +M   A  +   V  +          
Sbjct: 38  LQTTDQSAAKKFYTSLFGWG-YDDNPVPGGGGVYSM---ATLNGEAVAAIAPMPPGAPEG 93

Query: 219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
               +    I+ DDV    + V       GG++      I     +++   DP G
Sbjct: 94  MPPIWN-TYIAVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTG 142

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score =  112 bits (281), Expect = 5e-31
 Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 14/133 (10%)

Query: 23  RFLHAVYR--VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           + L  + R  V DL+  ++FY E     +  + ++P+     A +      +        
Sbjct: 4   KILQILSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIA-------- 55

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G                 + + K    +   G  + R P  +  G      V+  DG 
Sbjct: 56  --GSEEALKPFRNTQATFLVDSLDKFKTFLEENGAEIIRGPSKVPTGRN--MTVRHSDGS 111

Query: 141 IFELIQRGPTPEP 153
           + E ++       
Sbjct: 112 VIEYVEHSKIEAE 124

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei} Length = 144

 Score = 74.5 bits (183), Expect = 9e-17
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
             L V DL  +++FYE+ L   +    + P+    LA +        T+L +    G  E
Sbjct: 10  SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS-------TILLI---AGSEE 59

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
             K     Q     D + K    +    +E G +I R P  +P    +  +    DG   
Sbjct: 60  ALKPFRNTQATFLVDSLDKFKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVI 113

Query: 277 VLVD 280
             V+
Sbjct: 114 EYVE 117

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score =  106 bits (267), Expect = 4e-29
 Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 10/131 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H  Y V ++D  +K +     ++          K    F+  G  +    VEL    
Sbjct: 7   KVHHIGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGGYR----VELVAPD 62

Query: 83  GVTS-----YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG-GTTHIAFVKD 136
           G  S        G+   H     ED+ K +E +   G  + ++           +AF+  
Sbjct: 63  GEDSPINKTIKKGSTPYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 137 PDGYIFELIQR 147
            D  + EL+++
Sbjct: 123 TDIGLIELLEK 133

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A Length = 133

 Score = 72.9 bits (179), Expect = 3e-16
 Identities = 17/123 (13%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V ++  ++K +++   ++    V     K  +  +          +EL    G   
Sbjct: 11  IGYAVKNIDSALKKFKRLGYVEESEVVRDEVRKVYIQFVINGG----YRVELVAPDGEDS 66

Query: 217 -----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-D 270
                  KG+    +    +D+ KS E +     ++G  + ++    P ++ +  +F+  
Sbjct: 67  PINKTIKKGSTPYHICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAIDNRKVAFLFS 122

Query: 271 PDG 273
            D 
Sbjct: 123 TDI 125

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score =  101 bits (252), Expect = 1e-26
 Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 8/138 (5%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--------KYSNAFLGFGPEQSH 73
           R+  H    V D+  +  FY    G+  L   +VP          K +N     G     
Sbjct: 18  RKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDL 77

Query: 74  FVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           F                T   H A   +               +    GP+   T    +
Sbjct: 78  FGEPELSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVY 137

Query: 134 VKDPDGYIFELIQRGPTP 151
             DPDG++ E+       
Sbjct: 138 FYDPDGFMIEIRCDPEAE 155

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102} Length = 156

 Score = 57.6 bits (139), Expect = 2e-10
 Identities = 23/125 (18%), Positives = 32/125 (25%), Gaps = 12/125 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPE--------YKYTLAMLGYAEEDQTTVLEL 208
           + L V D+  S  FY   LG+  L   + P          K    +              
Sbjct: 23  IALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPE 82

Query: 209 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF 268
                            +A   D       V  +   E    I   P + P    +   F
Sbjct: 83  LSPPDPNPEKTFTRAYHLAFDIDPQLFDRAVTVI--GENKIAIAHGPVTRPT--GRGVYF 138

Query: 269 VDPDG 273
            DPDG
Sbjct: 139 YDPDG 143

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score =  100 bits (251), Expect = 1e-26
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R       V D  +   FYT   G  +     V  +++        P+ +  ++E + + 
Sbjct: 26  RIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHA 85

Query: 83  GVTSYD---IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
            VT +    +  G    + A +D+    E + A G   T+EP  +       A + D  G
Sbjct: 86  AVTPFKEALVADGIPAASFAVDDIAAEYERLSALGVRFTQEPTDMGPVV--TAILDDTCG 143

Query: 140 YIFELIQ 146
            + +L+Q
Sbjct: 144 NLIQLMQ 150

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila} Length = 155

 Score = 65.1 bits (158), Expect = 3e-13
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 9/123 (7%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
           +    + V D  ++  FY   LG  +   V     ++   +   A +    +LE + +  
Sbjct: 27  IHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAA 86

Query: 214 VTEYTKGNAYAQV---AISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVD 270
           VT + +      +   + + DD+    E +      LG + T++P  +           D
Sbjct: 87  VTPFKEALVADGIPAASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDD 140

Query: 271 PDG 273
             G
Sbjct: 141 TCG 143

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 96.2 bits (239), Expect = 5e-25
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 9/128 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           +  H      +L++  +FY   FG       +   + +++ FL F        +E+    
Sbjct: 3   KIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFE---DGARLEIMSRT 59

Query: 83  GVTS--YDIGTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
            VT        G+ H AI+    E V +L E +R  G  +  EP    G   + + V DP
Sbjct: 60  DVTGKTTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEPRM-TGDGYYESVVLDP 118

Query: 138 DGYIFELI 145
           +G   E+ 
Sbjct: 119 EGNRIEIT 126

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str} Length = 127

 Score = 59.2 bits (143), Expect = 2e-11
 Identities = 27/120 (22%), Positives = 44/120 (36%), Gaps = 9/120 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   +L +  +FY    G       +     +    L + +      LE+     VT 
Sbjct: 7   VALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDG---ARLEIMSRTDVTG 63

Query: 217 YTKGNA--YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV-DPDG 273
            T G    +A +AIST       E+   + ++ G  I  +P      +    S V DP+G
Sbjct: 64  KTTGENLGWAHIAISTGTKEAVDELTEKL-RQDGFAIAGEPRMTG--DGYYESVVLDPEG 120

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 93.6 bits (232), Expect = 7e-24
 Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 16/133 (12%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF----VVELTY 80
           +       D++ +  F+ +  G ++  +R  P+E++   +L                  +
Sbjct: 7   VVPELYCFDINVSQSFFVDVLGFEVKYER--PDEEF--VYLTLDGVDVMLEGIAGKSRKW 62

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP---LKGGTTHIA----F 133
             G   + +G+G  +F     D+  L + +     +           + G +        
Sbjct: 63  LSGDLEFPLGSGV-NFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFM 121

Query: 134 VKDPDGYIFELIQ 146
           V+ PDGY+F   Q
Sbjct: 122 VQTPDGYLFRFCQ 134

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 59.7 bits (144), Expect = 2e-11
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 8/121 (6%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVT 215
            L   D+  S  F+   LG ++    ++P+ ++    L   +   +        +  G  
Sbjct: 10  ELYCFDINVSQSFFVDVLGFEVKY--ERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDL 67

Query: 216 EYTKGNAYAQVAISTDDVYKS-AEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPD 272
           E+  G+          D+      V       +   +  +             F    PD
Sbjct: 68  EFPLGSGVN-FQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPD 126

Query: 273 G 273
           G
Sbjct: 127 G 127

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 91.1 bits (226), Expect = 9e-23
 Identities = 22/144 (15%), Positives = 46/144 (31%), Gaps = 22/144 (15%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGFGPE 70
            R  +    V  LD  I F+ E  G+ L  + +V             +    A +     
Sbjct: 10  LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTP-- 66

Query: 71  QSHFVVELTYNYGVTSYDI-------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGP 123
             H  +EL+      +            G+       ED+ ++V  +   G  +  E   
Sbjct: 67  DGHSRIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQ 126

Query: 124 LKGGTTHIAFVKDPDGYIFELIQR 147
               +  + +++  +G +  L + 
Sbjct: 127 -YENSYRLCYIRGVEGILIGLAEE 149

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6 Length = 153

 Score = 57.2 bits (138), Expect = 2e-10
 Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 26/135 (19%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK-----------PEYKYTLAMLGYAEEDQTTV 205
           V + V  L  +I F+E  +G+ L    +                  +AM+     D  + 
Sbjct: 15  VSIVVESLDNAISFFE-EIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVT--PDGHSR 71

Query: 206 LELTYNYGVTEYTKGNA-------YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI 258
           +EL+                    Y +V  + +D+ +    +     + G ++  +    
Sbjct: 72  IELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQY 127

Query: 259 PGLNTKITSFVDPDG 273
              + ++      +G
Sbjct: 128 EN-SYRLCYIRGVEG 141

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 83.7 bits (207), Expect = 5e-20
 Identities = 22/134 (16%), Positives = 37/134 (27%), Gaps = 14/134 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE---- 77
              +       DLD    FY + FG++++ K           F   G +           
Sbjct: 7   SAIMETALYADDLDAAEAFYRDVFGLEMVLKLP-----GQLVFFKCGRQMLLLFDPQESS 61

Query: 78  LTYNYGVTSYDIGTGFGHFAI---ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV 134
                         G GHF        +V +      A    V        G  +   ++
Sbjct: 62  RADANNPIPRHGAVGQGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYS--VYI 119

Query: 135 KDPDGYIFELIQRG 148
           +DP G   E+ +  
Sbjct: 120 RDPAGNSVEVGEGK 133

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens} Length = 160

 Score = 44.0 bits (104), Expect = 8e-06
 Identities = 16/122 (13%), Positives = 30/122 (24%), Gaps = 14/122 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT-----LAMLGYAEEDQTTVLELTYN 211
             L   DL  +  FY    G++++  +      +      L +    E  +         
Sbjct: 12  TALYADDLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPR 71

Query: 212 YGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDP 271
           +G                 DD  +  E      + L   +           +      DP
Sbjct: 72  HG------AVGQGHFCFYADDKAEVDEWKTRF-EALEIPVE--HYHRWPNGSYSVYIRDP 122

Query: 272 DG 273
            G
Sbjct: 123 AG 124

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 81.9 bits (202), Expect = 2e-19
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 5/118 (4%)

Query: 31  VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG 90
             D DR   FY + FG  +    ++P+  YS    G   E          N G+      
Sbjct: 33  FDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEV 89

Query: 91  TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG 148
           T      +  E +   +E I + GG       P+ G     A+  D +G +  L +  
Sbjct: 90  TTPV-VTVDVESIESALERIESLGGKTVTGRTPV-GNMGFAAYFTDSEGNVVGLWETA 145

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP} Length = 148

 Score = 69.5 bits (170), Expect = 6e-15
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 9/124 (7%)

Query: 150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 209
               +    +   D  R+  FY  A G  +    + P+  Y++   G   E         
Sbjct: 22  MTGRIVHFEIPFDDGDRARAFYRDAFGWAI---AEIPDMDYSMVTTGPVGESGMPDEPGY 78

Query: 210 YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 269
            N G+ +  +      V +  + +  + E +    + LGGK       +  +      F 
Sbjct: 79  INGGMMQRGEVTT-PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFT 132

Query: 270 DPDG 273
           D +G
Sbjct: 133 DSEG 136

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 80.6 bits (199), Expect = 3e-19
 Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 12/123 (9%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     VG  +    FY E  GM+ + K +   +K    +   G ++ H  VE  +N   
Sbjct: 14  VQVAAPVGCEEEARAFYGETIGMEEIPKPEEL-KKRGGCWFKCGNQEIHIGVEQNFNPA- 71

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
                     H A     + +  + +  +G  V  +            +V DP G   E 
Sbjct: 72  -------KRAHPAFYVLKIDEFKQELIKQGIEVIDDH-ARPDV--IRFYVSDPFGNRIEF 121

Query: 145 IQR 147
           ++ 
Sbjct: 122 MEN 124

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str} Length = 126

 Score = 43.3 bits (102), Expect = 8e-06
 Identities = 18/118 (15%), Positives = 39/118 (33%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
           QV   VG    +  FY + +GM+ +   ++ + +         +E     + +    GV 
Sbjct: 15  QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQE-----IHI----GVE 65

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +       A  A     + +  + +     + G ++     + P          DP G
Sbjct: 66  QNFNPAKRAHPAFYVLKIDEFKQEL----IKQGIEVIDDH-ARPD--VIRFYVSDPFG 116

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 80.4 bits (198), Expect = 6e-19
 Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 12/123 (9%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
             G LD  I+FY E   +K + +       Y     G      H   E T   G ++  +
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQHNG-YDGVMFGLPHADYHL--EFTQYEGGSTAPV 74

Query: 90  GTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFEL 144
                          ++  +   ++  G        P    GG T    ++DPDG+    
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSNGGVT----IEDPDGWRIVF 130

Query: 145 IQR 147
           +  
Sbjct: 131 MNS 133

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8 Length = 139

 Score = 75.7 bits (186), Expect = 3e-17
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 6/123 (4%)

Query: 160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK 219
             G L   I+FYE+ L +K +    +    Y   M G         LE T   G +    
Sbjct: 18  PTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGL--PHADYHLEFTQYEGGSTAPV 74

Query: 220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV 279
            +  + +     +  + A + + + + +G +        P  +    +  DPDGW+ V +
Sbjct: 75  PHPDSLLVFYVPNAVELAAITSKL-KHMGYQEVESEN--PYWSNGGVTIEDPDGWRIVFM 131

Query: 280 DNE 282
           +++
Sbjct: 132 NSK 134

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 78.1 bits (192), Expect = 5e-18
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H V  V D+  TI+FY E  G   +  +       +   L FG ++ +   +    
Sbjct: 22  DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGAQKINLHQQEMEF 75

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPDG 139
               S           I +  +  +V  I   G ++   P    G T  I   +++DPDG
Sbjct: 76  EPKASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

Query: 140 YIFELIQ 146
            + E+ Q
Sbjct: 136 NLIEISQ 142

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygenase, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A Length = 152

 Score = 43.9 bits (103), Expect = 9e-06
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           ++L V D+  +I+FYE+ LG   +       +K     L +  +      +         
Sbjct: 27  LVLTVSDISTTIRFYEEVLGFSAVT------FKQNRKALIFGAQKINLHQQEMEFEPKAS 80

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITS--FVDPDG 273
                +     I++  +      +     + G  I   P    G   +I S    DPDG
Sbjct: 81  RPTPGSADLCFITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDG 135

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 74.6 bits (184), Expect = 7e-17
 Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +       +V +L+++ +FYTE  G +          +++  ++  G      + E   N
Sbjct: 27  KGLFEVAVKVKNLEKSSQFYTEILGFEAGLLD--SARRWNFLWVS-GRAGMVVLQEEKEN 83

Query: 82  YGVTSYDIGTGFGHFA--IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDP 137
           +            HF+  +   ++  L + + +KG +V    GP+          +  DP
Sbjct: 84  WQQQ---------HFSFRVEKSEIEPLKKALESKGVSVH---GPVNQEWMQAVSLYFADP 131

Query: 138 DGYIFELI 145
           +G+  E  
Sbjct: 132 NGHALEFT 139

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium} Length = 141

 Score = 41.5 bits (98), Expect = 5e-05
 Identities = 8/34 (23%), Positives = 17/34 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
           V ++V +L +S +FY + LG +         + +
Sbjct: 32  VAVKVKNLEKSSQFYTEILGFEAGLLDSARRWNF 65

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 74.5 bits (183), Expect = 8e-17
 Identities = 23/120 (19%), Positives = 40/120 (33%), Gaps = 8/120 (6%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGV 84
           H  + V DL+R  +     F  + +   D  +       F   G       + +    G 
Sbjct: 7   HMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAIMQGE 60

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
              +       F I   D  +  E +   G ++      ++G    I F  D D ++FEL
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSIYF-YDDDNHMFEL 119

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2 Length = 139

 Score = 46.8 bits (111), Expect = 7e-07
 Identities = 18/117 (15%), Positives = 36/117 (30%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V DL R  +  E     + +        +++L+   +        + +    G   
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREV--YASDTEQFSLSREKFFLIGD---IWVAIMQGEKL 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
             +   +    I   D  + AE V     +LG  +      + G   +   F D D 
Sbjct: 63  AERSYNHIAFKIDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDN 114

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 72.9 bits (179), Expect = 3e-16
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H    V DL +++ F+ E  G+ L  + +      + A+L  G        +    
Sbjct: 3   QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN------TGAYLTCGDLWVCLSYDEARQ 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
             V   +       F +A ED   L + +   G  + ++            +  DPDG+ 
Sbjct: 57  -YVPPQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQN----KSEGASFYFLDPDGHK 111

Query: 142 FELI 145
            EL 
Sbjct: 112 LELH 115

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2 Length = 141

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVD 184
           + L V DL +S+ F+ + LG+ L    +
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHARWN 35

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 72.6 bits (178), Expect = 5e-16
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 12/130 (9%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V  L+ +I F+    G                    +   +++ V   T + 
Sbjct: 20  MLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR-----GKSYKHGKTYLVFVQTEDR 74

Query: 83  GVTSY--DIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREP-GPLKGGTTH-IAFVK 135
             T       TG  H A      E V +L + ++ +G  +  E   P  GG  H   F +
Sbjct: 75  FQTPTFHRKRTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCE 134

Query: 136 DPDGYIFELI 145
           DP+    E++
Sbjct: 135 DPNRIKVEIV 144

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125} Length = 146

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 22/119 (18%), Positives = 34/119 (28%), Gaps = 6/119 (5%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V + V  L  SI F++  LG              +            T           +
Sbjct: 24  VEINVDHLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRK 83

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDG 273
            T  N  A  A S + V +  + +    +E G  I  +       G N       DP+ 
Sbjct: 84  RTGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNR 138

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 70.9 bits (174), Expect = 8e-16
 Identities = 25/125 (20%), Positives = 39/125 (31%), Gaps = 19/125 (15%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
              H    V D+    +F  + FG+     R        NAF         F++ L    
Sbjct: 3   GIKHLNLTVADVVAAREFLEKYFGLTCSGTRG-------NAFAVMRDN-DGFILTLMKGK 54

Query: 83  GVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
            V          H        E V K+ + ++  G     EP       T   +V+ P G
Sbjct: 55  EVQ----YPKTFHVGFPQESEEQVDKINQRLKEDG--FLVEPPKHAHAYT--FYVEAPGG 106

Query: 140 YIFEL 144
           +  E+
Sbjct: 107 FTIEV 111

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2 Length = 113

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 17/119 (14%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           + L V D+  + +F EK  G+    T                 ++   +L L     V +
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCSGTRGNA--------FAVMRDNDGFILTLMKGKEV-Q 57

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWK 275
           Y K         S + V K  + +    +E G  +     +    +        P G+ 
Sbjct: 58  YPKTFHVGFPQESEEQVDKINQRL----KEDGFLVEPPKHA----HAYTFYVEAPGGFT 108

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 69.7 bits (171), Expect = 4e-15
 Identities = 25/127 (19%), Positives = 39/127 (30%), Gaps = 8/127 (6%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DLD + ++YTE    K L +     +  S A        S  + E        
Sbjct: 8   HVSLTVRDLDISCRWYTEILDWKELVRGR--GDTTSFAHGVLPGGLSIVLREHDGGGTDL 65

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
             +   G  H + +     D+  L E +   G   T      +     I   +D D    
Sbjct: 66  FDETRPGLDHLSFSVESMTDLDVLEERLAKAGAAFT---PTQELPFGWILAFRDADNIAL 122

Query: 143 ELIQRGP 149
           E +    
Sbjct: 123 EAMLGRE 129

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP} Length = 136

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 11/40 (27%), Positives = 16/40 (40%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLG 196
           V L V DL  S ++Y + L  K L         +   +L 
Sbjct: 9   VSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP 48

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A* Length = 133

 Score = 68.8 bits (168), Expect = 1e-14
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H V  V D+  T  FY +  GMK +              L FG ++ +   +L   
Sbjct: 9   SHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGAGR------IALEFGHQKINL-HQLGNE 61

Query: 82  YGVTSYDIGTGFGHFA-IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPD 138
           +   + ++  G      I    +   ++++  +G  +   P    G    I   + +DPD
Sbjct: 62  FEPKAQNVRVGSADLCFITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPD 121

Query: 139 GYIFEL 144
           G + E+
Sbjct: 122 GNLIEV 127

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 68.7 bits (168), Expect = 1e-14
 Identities = 28/123 (22%), Positives = 37/123 (30%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L  + D        A+L  G        E  Y 
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEARWD------QGAYLELGSLWLCLSREPQYG 56

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                Y        F IA  D  +    +RA G                  +  DPDG+ 
Sbjct: 57  GPAADYT----HYAFGIAAADFARFAAQLRAHG----VREWKQNRSEGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A Length = 135

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDK 185
           + L V DL  SI FY   LG +L    D+
Sbjct: 8   LTLAVADLPASIAFYRDLLGFRLEARWDQ 36

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 68.4 bits (167), Expect = 1e-14
 Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 13/146 (8%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF++ +  V D++R+  FY +  G+K+L         +     GF   +   + E  +  
Sbjct: 8   RFVNPIPFVRDINRSKSFYRDRLGLKILED----FGSFVLFETGFAIHEGRSLEETIWRT 63

Query: 83  GVTSYDI-GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
              + +  G           DV    ++I A    +         G        DPDG+ 
Sbjct: 64  SSDAQEAYGRRNMLLYFEHADVDAAFQDI-APHVELIHPLERQAWGQRVF-RFYDPDGHA 121

Query: 142 FELIQRGPTPEPLCQVMLRVGDLGRS 167
            E+       E L Q    +   G S
Sbjct: 122 IEVG------ESLSQSGENLYFQGGS 141

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 53.7 bits (129), Expect = 2e-09
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG 213
               +  V D+ RS  FY   LG+K+L         + L   G+A  +  ++ E  +   
Sbjct: 9   FVNPIPFVRDINRSKSFYRDRLGLKILEDFG----SFVLFETGFAIHEGRSLEETIWRTS 64

Query: 214 V-TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
              +   G     +     DV  + + +         ++            ++  F DPD
Sbjct: 65  SDAQEAYGRRNMLLYFEHADVDAAFQDI-----APHVELIHPLERQAW-GQRVFRFYDPD 118

Query: 273 G 273
           G
Sbjct: 119 G 119

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 40/278 (14%), Positives = 78/278 (28%), Gaps = 54/278 (19%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H   RV D+ + ++ Y E  G+       +  +     +L    E   F + L       
Sbjct: 10  HVQLRVLDMSKALEHYVELLGLIE-----MDRDDQGRVYLKAWTEVDKFSLVLR------ 58

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                 G           + + +L  ++ A G  V + P             + P G+ F
Sbjct: 59  -EADEPGMDFMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHF 117

Query: 143 ELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLL 180
           EL                        +G         ++   +L  +   + K LG  L 
Sbjct: 118 ELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVRFDHALMYGDELPATYDLFTKVLGFYLA 177

Query: 181 RTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI---STDDVYKSA 237
             V           L        ++    ++     + +      V+    + +D+ ++A
Sbjct: 178 EQVLDENGTRVAQFL--------SLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRAA 229

Query: 238 EVVNLVTQELGGKITRQPGS-IPGLNTKITSFVDPDGW 274
           +++          I   P          I  F DP G 
Sbjct: 230 DLI----SMTDTSIDIGPTRHGLTHGKTIY-FFDPSGN 262

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3 Length = 307

 Score = 49.1 bits (117), Expect = 6e-07
 Identities = 23/128 (17%), Positives = 40/128 (31%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            RF HA+    +L  T   +T+  G  L  +           FL    +         ++
Sbjct: 149 VRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--------AHD 200

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPG--PLKGGTTHIAFVKD 136
                +       H +      ED+ +  + I     ++   P    L  G T   +  D
Sbjct: 201 VAFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTI--YFFD 258

Query: 137 PDGYIFEL 144
           P G   E+
Sbjct: 259 PSGNRNEV 266

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 67.5 bits (165), Expect = 3e-14
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 6/119 (5%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL++T  F    F  + +      ++ +S +   F        + +    G +
Sbjct: 7   HITLIVKDLNKTTAFLQNIFNAEEI--YSSGDKTFSLSKEKF---FLIAGLWICIMEGDS 61

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
             +       F I +E+V +  E I+A G  + +   P   G     +  D D ++FEL
Sbjct: 62  LQERTYNHIAFQIQSEEVDEYTERIKALGVEM-KPERPRVQGEGRSIYFYDFDNHLFEL 119

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A Length = 133

 Score = 43.7 bits (103), Expect = 8e-06
 Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 14/119 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           + L V DL ++  F +     + +      +  ++L+   +        + +     + E
Sbjct: 8   ITLIVKDLNKTTAFLQNIFNAEEIY--SSGDKTFSLSKEKFFLIAGLW-ICIMEGDSLQE 64

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQEL--GGKITRQPGSIPGLNTKITSFVDPDG 273
                 Y  +A          E V+  T+ +   G   +          +   F D D 
Sbjct: 65  ----RTYNHIAFQIQS-----EEVDEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDN 114

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 67.3 bits (164), Expect = 4e-14
 Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 12/132 (9%)

Query: 19  KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP---EEKYSNAFLGFGPEQSHFV 75
           K+     +      D+     FY + FG + +     P         + +GF   +++ +
Sbjct: 4   KNMADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYEL 63

Query: 76  VELTYNYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIA 132
           ++L         +               E V KLV    A G  + + P          A
Sbjct: 64  MQLAQF-----SETSGIKFLLNFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWYQ-A 117

Query: 133 FVKDPDGYIFEL 144
            + DP+  +F +
Sbjct: 118 VLLDPERNVFRI 129

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans} Length = 141

 Score = 48.4 bits (115), Expect = 2e-07
 Identities = 17/119 (14%), Positives = 36/119 (30%), Gaps = 8/119 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V +   D+     FY++  G + + ++  P ++           +     EL      +E
Sbjct: 12  VNIFTRDIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSE 71

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQ--ELGGKITRQPGSIPGLNTKITSFVDPDG 273
            +       +    D       V  LV      G  + + P      +      +DP+ 
Sbjct: 72  TSGI--KFLLNFDVDTK---EAVDKLVPVAIAAGATLIKAPYETYY-HWYQAVLLDPER 124

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 70.0 bits (171), Expect = 6e-14
 Identities = 39/264 (14%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V DL ++ +FY +  G+ +  + +      +  +L    E  H  + L    G  
Sbjct: 20  YMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLR--QGPI 71

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +      +     +  +V       +  G    R       G      V+DP G+ +E  
Sbjct: 72  AAVAAFAYR--VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
                                  L        D+ R   + E  LG ++   +   +   
Sbjct: 130 YETEHVERLTQRYDLYSAGELVRLDHFNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVT 188

Query: 191 TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +   +    T L            + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKQTVHDTAL------TGGNGPRMHHVAFATHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGSIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPDG 
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDGH 264

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A Length = 323

 Score = 42.3 bits (99), Expect = 9e-05
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  H      D+ R   +  E  G ++       +     A++       H       N
Sbjct: 151 VRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQ-TVHDTALTGGN 208

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKD 136
                   G    H A AT    ++ ++ + + A   +   E GP + G ++  +  + D
Sbjct: 209 --------GPRMHHVAFATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILD 260

Query: 137 PDGYIFEL 144
           PDG+  E+
Sbjct: 261 PDGHRIEI 268

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp} Length = 135

 Score = 66.7 bits (162), Expect = 6e-14
 Identities = 20/132 (15%), Positives = 33/132 (25%), Gaps = 11/132 (8%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
             ++     H      DLD    FY    G KL R+            +         V 
Sbjct: 3   AMRNPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP--------DRITLDFFGDQLVC 54

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP---GPLKGGTTHIAF 133
            L+  +          FG      +    L +  + +G     +               F
Sbjct: 55  HLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFF 114

Query: 134 VKDPDGYIFELI 145
           + DP   + E  
Sbjct: 115 LIDPSNNLLEFK 126

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 67.0 bits (163), Expect = 7e-14
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 9/126 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL--- 78
           ++       +GDL+ + +FY E FG   + +           +   G   + ++V+    
Sbjct: 4   QQVAVITLGIGDLEASARFYGEGFGWAPVFRNPEII-----FYQMNGFVLATWLVQNLQE 58

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
                VTS        H   A  +V  L+E + A GG + R             +V DPD
Sbjct: 59  DVGVAVTSRPGSMALAHNVRAETEVAPLMERLVAAGGQLLRPADA-PPHGGLRGYVADPD 117

Query: 139 GYIFEL 144
           G+I+E+
Sbjct: 118 GHIWEI 123

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi} Length = 150

 Score = 52.7 bits (126), Expect = 7e-09
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK----YTLAMLGYAEEDQTTVLELTYNY 212
           + L +GDL  S +FY +  G   +    +  +     + LA        +   + +T   
Sbjct: 9   ITLGIGDLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRP 68

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
           G        A A    +  +V    E +       GG++ R   + P    +     DPD
Sbjct: 69  G------SMALAHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHGGLRGY-VADPD 117

Query: 273 G 273
           G
Sbjct: 118 G 118

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 66.6 bits (162), Expect = 7e-14
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 10/127 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR  H V  V  +  T  FY++  GM+++  ++          L FG +Q   + E+   
Sbjct: 26  RRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE------DRKALCFG-DQKFNLHEVGKE 78

Query: 82  YGVTSYDIGTGFGHFA-IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA--FVKDPD 138
           +   +     G      I    + +++++++A    +   P P  G    I   + +DPD
Sbjct: 79  FEPKAAHPVPGSLDICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPD 138

Query: 139 GYIFELI 145
             + E+ 
Sbjct: 139 RNLIEVS 145

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens} Length = 147

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 18/119 (15%), Positives = 38/119 (31%), Gaps = 12/119 (10%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +++ V  +  +  FY K LGM+++   +          L + ++                
Sbjct: 31  IVMTVKSIKDTTMFYSKILGMEVMTFKEDR------KALCFGDQKFNLHEVGKEFEPKAA 84

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITS--FVDPDG 273
           +    +     I+   + +  + +    +     I   P    G    I S  F DPD 
Sbjct: 85  HPVPGSLDICLITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDR 139

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 65.8 bits (160), Expect = 1e-13
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL--GFGPEQSHFVVELTY 80
              H  Y   D D   K+Y E FG   L + + PE+      +       +    V++  
Sbjct: 9   CIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMA 68

Query: 81  NYGVTS--------YDIGTGFGHFAIATEDVYKLVENIRAKGGNV-TREPGPLKGGTTHI 131
                S        ++   G  H A   +D+  +   +R +G  +   EP    GG   I
Sbjct: 69  PLNDESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-I 127

Query: 132 AFV--KDPDGYIFELIQ 146
            F+  K   G + EL Q
Sbjct: 128 NFMHPKSGKGVLIELTQ 144

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A Length = 148

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 16/134 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML--GYAEEDQTTVLELTYNYG 213
            V     D   + K+Y++  G   L   + PE      M+       +  T +++     
Sbjct: 12  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 71

Query: 214 --------VTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKI 265
                   + ++        +A   DD+   +       +E G ++      +     +I
Sbjct: 72  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSA----TLRERGVQLLYDEPKLGTGGNRI 127

Query: 266 TSFVDP-DGWKTVL 278
             F+ P  G   ++
Sbjct: 128 N-FMHPKSGKGVLI 140

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 64.4 bits (157), Expect = 3e-13
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R + A     +  R   FY +  GM +                   P ++H  V      
Sbjct: 7   RRVVANIATPEPARAQAFYGDILGMPVAMDHGWI------VTHA-SPLEAHAQVSFAREG 59

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           G      GT     +I  ++  ++   I   G  +   P     G     F++DP G + 
Sbjct: 60  GS-----GTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLI 113

Query: 143 ELIQRG 148
            ++   
Sbjct: 114 NILSHA 119

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2 Length = 119

 Score = 38.2 bits (89), Expect = 4e-04
 Identities = 19/116 (16%), Positives = 32/116 (27%), Gaps = 17/116 (14%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
            +   +  R+  FY   LGM +    D               E    V          E 
Sbjct: 12  NIATPEPARAQAFYGDILGMPVAM--DHGWI----VTHASPLEAHAQVSFA------REG 59

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
             G     ++I  D+  +    +     + G  I   P +      ++    DP G
Sbjct: 60  GSGTDVPDLSIEVDNFDEVHARI----LKAGLPIEYGPVTEAWGVQRLF-LRDPFG 110

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A* Length = 309

 Score = 67.6 bits (165), Expect = 3e-13
 Identities = 37/212 (17%), Positives = 62/212 (29%), Gaps = 40/212 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  HA  RV +L+  I FY    G+          +     +     E+ H    +   
Sbjct: 7   LRPGHAQVRVLNLEEGIHFYRNVLGLVE-----TGRDDQGRVYFKCWDERDHSCYIIR-- 59

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREP-GPLKGGTTHIAFVKDP 137
                     G   F         + KL  +++A G   TR P G +      + F + P
Sbjct: 60  -----EADTAGIDFFGFKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETGERVRF-ELP 113

Query: 138 DGYIFELI----------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKAL 175
            G++ EL                       + G  P  L   +L   ++    K + + L
Sbjct: 114 SGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAPIQLDHCLLYGPNIAEVQKIFTEVL 173

Query: 176 GMKL-LRTVDKPEYKYTLAMLGYAEEDQTTVL 206
           G  L  R +           L  + +      
Sbjct: 174 GFYLVERVLSPDGDSDMGIWLSCSHKVHDIAF 205

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 67.7 bits (165), Expect = 4e-13
 Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 36/178 (20%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
            A         T+ F+T+  GM +  +         + +L    +   + +++T      
Sbjct: 14  RAELFSPKPQETLDFFTKFLGMYVTHREG------QSVYLRGYEDPYPWSLKIT--EAPE 65

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +            + E + +  +++     + T        G     + + PDG+  +L+
Sbjct: 66  AGMGHAAMR--TSSPEALERRAKSLTDGNVDGTWSEDQFGYG-KTFEY-QSPDGHNLQLL 121

Query: 146 ------------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
                                    +G   + +  + L   D+      +E+ LG + 
Sbjct: 122 WEAEKYVAPPELRSKILTRPSKKPLQGIPVKRIDHLNLMSSDVTAVKDSFERHLGFRT 179

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii} Length = 339

 Score = 46.2 bits (109), Expect = 6e-06
 Identities = 23/128 (17%), Positives = 33/128 (25%), Gaps = 14/128 (10%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +R  H      D+      +    G +   +R V       A++                
Sbjct: 152 KRIDHLNLMSSDVTAVKDSFERHLGFR-TTERVVDGNVEIGAWMSSNLLGHEVACMRDMT 210

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKD 136
            G           H A      +     VE  R     +   P   K G T   F  V +
Sbjct: 211 GG------HGKLHHLAFFYGTGQHNIDAVEMFRDYDIQIEAGPD--KHGITQSQFLYVFE 262

Query: 137 PDGYIFEL 144
           P G   EL
Sbjct: 263 PGGNRIEL 270

>3eck_A Protein (homoprotocatechuate 2,3-dioxygenase); oxidoreductase, extradiol, FEII, crystal packing; HET: XXG; 1.60A {Brevibacterium fuscum} SCOP: d.32.1.3 d.32.1.3 PDB: 3ecj_A* 3ojn_A* 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* Length = 365

 Score = 67.4 bits (164), Expect = 5e-13
 Identities = 45/264 (17%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +A   V DL ++  FY +  G+ +  + +      +  +L    E  H  + LT   G  
Sbjct: 20  YAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLT--KGPV 71

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           +      F       EDV K     +  G    R       G      V+DP G+ +E  
Sbjct: 72  AALKAMAFR--VRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFF 129

Query: 146 ---------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKY 190
                                  L        D+ R  K+ E  LG ++   +   E   
Sbjct: 130 FETTHVERLHMRYDLYSAGELVRLDHFNQVTPDVPRGRKYLED-LGFRVTEDIQDDEGTT 188

Query: 191 TLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGK 250
             A +        T              + +  A       ++ +  +   +    +  +
Sbjct: 189 YAAWMHRKGTVHDTA------LTGGNGPRLHHVAFSTHEKHNIIQICD--KMGALRISDR 240

Query: 251 ITRQPGSIPGLNTKITSFVDPDGW 274
           I R PG     N      +DPD  
Sbjct: 241 IERGPGRHGVSNAFYLYILDPDNH 264

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A* Length = 252

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 32/180 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
                      +LDR + FYT   G + + ++           +  G  Q  F       
Sbjct: 25  TSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGVSQIQF------- 71

Query: 82  YGVTSYDIGTGFGHFA--IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIA---FVKD 136
               + D    F H A  IA     +    +   G  +T             A   +V+D
Sbjct: 72  --RAAADGTKPFYHIAINIAANHFQEGKAWLSGFGELLTENDEDQAYFPFFNAYSCYVED 129

Query: 137 PDGYIFELIQRGPTPEP------------LCQVMLRVGDLGRSIKFYEKALGMKLLRTVD 184
           P G I ELI R                  + ++ +   D+ ++    ++A     L  ++
Sbjct: 130 PSGNIIELISRQQAAPVLDKPFSADQLLSIGEINITTSDVEQAATRLKQAELPVKLDQIE 189

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 64.7 bits (157), Expect = 4e-12
 Identities = 27/181 (14%), Positives = 49/181 (27%), Gaps = 24/181 (13%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--G 83
           H      + +    FY    G++ + K  V ++  S   L +G +      EL++     
Sbjct: 33  HISMVTKNANENNHFYKNVLGLRRV-KMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPL 91

Query: 84  VTSYDIGTG-FGHFAIATEDVYKLVE-NIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           V     GT       +       L     R +  +V             + F +D +G  
Sbjct: 92  VGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQF-EDAEGLR 150

Query: 142 FELIQRGPTPEPLCQ------------------VMLRVGDLGRSIKFYEKALGMKLLRTV 183
             L+          +                  V L V  L +      +  G   +   
Sbjct: 151 LVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRN 210

Query: 184 D 184
           D
Sbjct: 211 D 211

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10 Length = 338

 Score = 53.1 bits (127), Expect = 3e-08
 Identities = 23/132 (17%), Positives = 41/132 (31%), Gaps = 12/132 (9%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            +        V  LD+     TE FG        V        F     E    +V    
Sbjct: 178 IQGMGSVELTVRRLDKMASTLTEIFGYTE-----VSRNDQEAIFQSIKGEAFGEIVVKYL 232

Query: 81  NYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
           +        G    H AI      ++    E ++ +G + +   G +        + ++ 
Sbjct: 233 DGPTEKPGRG-SIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRES 288

Query: 138 DGYIFELIQRGP 149
           +G +FE+   GP
Sbjct: 289 NGILFEIATDGP 300

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 60.6 bits (147), Expect = 1e-11
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
              D DR + +    FG +LL ++        +A L  G      +V  T      S   
Sbjct: 9   AYTDPDRAVDWLVRVFGFRLLLRQP-AIGTIRHADLDTG--GGIVMVRRTGEPYTVSCAG 65

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP 149
           G       +   DV +      A G ++ +       G      V+D +G+++E  +   
Sbjct: 66  GHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDKPWG-LRQYLVRDLEGHLWEFTRHLR 124

Query: 150 TPEP 153
              P
Sbjct: 125 DVPP 128

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 8/117 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   D  R++ +  +  G +LL            A L         ++  T       
Sbjct: 6   VELAYTDPDRAVDWLVRVFGFRLLLRQPAIG-TIRHADLDTG--GGIVMVRRTGEPYTVS 62

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
              G+   QV +   DV +            G  I +     P    +     D +G
Sbjct: 63  CAGGHTCKQVIVWVSDVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEG 114

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 62.6 bits (152), Expect = 2e-11
 Identities = 40/169 (23%), Positives = 66/169 (39%), Gaps = 27/169 (15%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFL-GFGPEQSHFVVELTYNYGV 84
           +  Y V D D    FY + +G++ + +        +NA+    G ++ H VV+L      
Sbjct: 11  YVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADE-HHVVQLR--RAD 61

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIF 142
            +          A +  DV  L  ++ A G  V  EP  L   GG     F   PDG +F
Sbjct: 62  ENRIDVIALA--ADSRSDVDALRASVEAAGCKVASEPAVLATPGGGYGFRFF-SPDGLLF 118

Query: 143 EL-----------IQRGPT-PEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           E+           + R    P  +  ++L   +    +KF+   LG K+
Sbjct: 119 EVSSDVAKGAKRDLARWEGVPVKISHIVLHSPNHQDMVKFFTDVLGFKV 167

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans} Length = 310

 Score = 40.2 bits (94), Expect = 4e-04
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 24/129 (18%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE-QSHFVVELTY 80
            +  H V    +    +KF+T+  G K+    D   +     FL          ++    
Sbjct: 140 VKISHIVLHSPNHQDMVKFFTDVLGFKV---SDWLGDFM--CFLRCNSAHHRIAILPGP- 193

Query: 81  NYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VK 135
                         H A      +D+ +    ++ KG ++   PG  +    +  F    
Sbjct: 194 ----------PCLNHVAYDMLSVDDMMRGAHRLKVKGIDIGWGPG--RHTAGNNTFSYFV 241

Query: 136 DPDGYIFEL 144
            P G++ E 
Sbjct: 242 TPGGFVTEY 250

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 59.0 bits (143), Expect = 2e-11
 Identities = 20/126 (15%), Positives = 35/126 (27%), Gaps = 14/126 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYN 81
                   V ++ +           K     D   +    +  L     Q+H V    + 
Sbjct: 5   NLNQLDIIVSNVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQ 62

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
            G+             I  EDV +  + +   G  V   P     GT     V+ P G +
Sbjct: 63  SGII----------IHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLV 111

Query: 142 FELIQR 147
            +  + 
Sbjct: 112 LDFYRM 117

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 45.6 bits (108), Expect = 1e-06
 Identities = 24/121 (19%), Positives = 43/121 (35%), Gaps = 18/121 (14%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNY 212
           L Q+ + V ++ +     E  L  K     D           G+A+    +  L L+ N+
Sbjct: 6   LNQLDIIVSNVPQVCADLEHILDKKADYAND-----------GFAQFTIGSHCLMLSQNH 54

Query: 213 GVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD 272
            V      +    + I  +DV ++ + +     ELG K+   P       T+      P 
Sbjct: 55  LVPLENFQSG-IIIHIEVEDVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPA 108

Query: 273 G 273
           G
Sbjct: 109 G 109

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 59.1 bits (143), Expect = 3e-11
 Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD----VPEEKYSNAFLGFGPEQSHFVVEL 78
           R       V D+ ++++FY +  G+++  + D              L +       V   
Sbjct: 4   RISLFAVVVEDMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTV--ETVRSY 60

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
              +   +             T  V K    +   G     +P     G  + A VKDPD
Sbjct: 61  DPEWQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQRY-AIVKDPD 119

Query: 139 GYIFELIQRGP 149
           G + +L    P
Sbjct: 120 GNVVDLFAPLP 130

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A* Length = 138

 Score = 38.3 bits (89), Expect = 5e-04
 Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 4/118 (3%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
              + V D+ +S++FY   LG+++    D   +     + G       TV  +       
Sbjct: 7   LFAVVVEDMAKSLEFYR-KLGVEIPAEADSAPH-TEAVLDGGIRLAWDTVETVRSYDPEW 64

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +   G     +A    D     +    +  + G +   +P +      +     DPDG
Sbjct: 65  QAPTGGHRFAIAFEFPDTASVDKKYAEL-VDAGYEGHLKPWNAVW-GQRYAIVKDPDG 120

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 57.7 bits (139), Expect = 7e-11
 Identities = 20/125 (16%), Positives = 31/125 (24%), Gaps = 12/125 (9%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                      L   + FY    G +    +     +   A              L    
Sbjct: 6   LITSITINTSHLQGMLGFY-RIIGFQFTASKVDKGSEVHRAVHN------GVEFSLYSIQ 58

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGG-NVTREPGPLKGGTTHIAFVKDPDGYI 141
                              D+ K V+ +    G     +P  +  G    A V DPDG+ 
Sbjct: 59  NPQRS--QIPSLQLGFQITDLEKTVQELVKIPGAMCILDPTDMPDG--KKAIVLDPDGHS 114

Query: 142 FELIQ 146
            EL +
Sbjct: 115 IELCE 119

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100} Length = 128

 Score = 43.8 bits (103), Expect = 6e-06
 Identities = 18/118 (15%), Positives = 35/118 (29%), Gaps = 14/118 (11%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
            + +    L   + FY   +G +   +      +   A+             L Y+    
Sbjct: 9   SITINTSHLQGMLGFYR-IIGFQFTASKVDKGSEVHRAVHN------GVEFSL-YSIQNP 60

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +        Q+     D+    + V  + +  G      P  +P     I   +DPDG
Sbjct: 61  Q-RSQIPSLQLGFQITDL---EKTVQELVKIPGAMCILDPTDMPDGKKAI--VLDPDG 112

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3 Length = 418

 Score = 60.7 bits (146), Expect = 1e-10
 Identities = 40/287 (13%), Positives = 76/287 (26%), Gaps = 51/287 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
             F H      D       ++   G  L  + D+     ++A L        F+    Y 
Sbjct: 30  LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYA 89

Query: 82  YGVTSYDI-----------------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL 124
           +G  +                    G      A+   D         A G      P  L
Sbjct: 90  HGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDL 149

Query: 125 KG----------GTTHIAFVKDPDGYI-------FELIQRGPTPEP----LCQVMLRVGD 163
                       G   + +V  PDG         FE +      +        ++  V +
Sbjct: 150 GRGFRLAEVELYGDVVLRYVSYPDGAAGEPFLPGFEGVASPGAADYGLSRFDHIVGNVPE 209

Query: 164 LGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY-AEEDQTTVLELTYNYGVT------- 215
           L  +  ++    G          +     + L      + +  + L  N  V        
Sbjct: 210 LAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQ 269

Query: 216 -----EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGS 257
                ++  G     +A+++DDV ++   +   +   G +    P S
Sbjct: 270 IQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTS 316

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A* Length = 297

 Score = 59.5 bits (144), Expect = 2e-10
 Identities = 26/178 (14%), Positives = 49/178 (27%), Gaps = 40/178 (22%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +  + V D+     F T+  G+      D      +            + + +       
Sbjct: 7   YMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQ------ 52

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDG 139
                               + ++ + ++  G  VT     L   +G T  I F  DP G
Sbjct: 53  -QGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFA-DPFG 110

Query: 140 YIFELI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
              E+                         + L   +  V D  +++ FY   LG +L
Sbjct: 111 LPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQL 168

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis} Length = 159

 Score = 56.4 bits (136), Expect = 5e-10
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 29/147 (19%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGF 67
           R  +     V D++ +++ Y E FG++  +                   + +   AF   
Sbjct: 18  RNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFEL 77

Query: 68  GPEQSHFVVELTYNYGVTSY------DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
           GP Q    +EL       S         G G  H A   +D+ + VE +  KG  V ++ 
Sbjct: 78  GPLQ----LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQK- 132

Query: 122 GPLKGGTTHIAFV--KDPDGYIFELIQ 146
           G  +GG    A++        + EL++
Sbjct: 133 GDFEGG--RYAYIDTLRALKVMIELLE 157

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 57.4 bits (138), Expect = 1e-09
 Identities = 23/178 (12%), Positives = 47/178 (26%), Gaps = 23/178 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRK---RDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           H    VG       FY    G++L+++    D P   +       G   +          
Sbjct: 11  HITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGA 70

Query: 83  GVTSYDIGT-GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                  G  G   + +    +    + +       T      + G  ++ F  DP G  
Sbjct: 71  RQGVIGDGQVGVTSYVVPKGAMAFWEKRLEKFNVPYT---KIERFGEQYVEF-DDPHGLH 126

Query: 142 FELIQRGPTPEPLCQ---------------VMLRVGDLGRSIKFYEKALGMKLLRTVD 184
            E+++R                          L      ++    E  +G++ +    
Sbjct: 127 LEIVEREEGEANTWTFGEVTPDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG 184

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp} Length = 335

 Score = 51.3 bits (122), Expect = 1e-07
 Identities = 20/136 (14%), Positives = 35/136 (25%), Gaps = 13/136 (9%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
           P    + F  A       D+T        G++ + K                 +  + + 
Sbjct: 147 PDVAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEG------DFVRYRSAGDIGNVID 200

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
                 G      GT   H A    D          I + G  VT           +  +
Sbjct: 201 LKLTPIGRGQMGAGT-VHHIAWRANDDEDQLDWQRYIASHGYGVT---PVRDRNYFNAIY 256

Query: 134 VKDPDGYIFELIQRGP 149
            ++    +FE+    P
Sbjct: 257 FREHGEILFEIATDPP 272

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 55.4 bits (133), Expect = 4e-09
 Identities = 24/176 (13%), Positives = 47/176 (26%), Gaps = 29/176 (16%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R   +      D+    ++  +  GM                +L      +  VV    +
Sbjct: 4   RSLGYLRIEATDMAAWREYGLKVLGMVE-----GKGAPEGALYLRMDDFPARLVVVPGEH 58

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
             +         G      E + ++   +  +G                  +    DP G
Sbjct: 59  DRL------LEAGWECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVDEMIRFADPSG 112

Query: 140 YIFELI-------QRGPTPEP---------LCQVMLRVGDLGRSIKFYEKALGMKL 179
              E+        +R  +P           +  V+L   D   ++ FY   LG +L
Sbjct: 113 NCLEVFHGTALEHRRVVSPYGHRFVTGEQGMGHVVLSTRDDAEALHFYRDVLGFRL 168

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A* Length = 300

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 17/137 (12%), Positives = 38/137 (27%), Gaps = 22/137 (16%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKL--------LRKRDVPEEKYSNAFLGFGPEQS 72
           ++   H V    D    + FY +  G +L               +   +         + 
Sbjct: 140 EQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRH 199

Query: 73  HFVVELTYNYGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTT 129
           H +               +G  H  +     +DV   ++    +   ++   G  +    
Sbjct: 200 HSL-------AFLPMPTSSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLG--RHVND 250

Query: 130 HIAF--VKDPDGYIFEL 144
            +    +K P G+  E 
Sbjct: 251 LMLSFYMKTPGGFDIEF 267

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 51.0 bits (122), Expect = 2e-08
 Identities = 15/126 (11%), Positives = 31/126 (24%), Gaps = 15/126 (11%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
           +     + D+   +  + +  G +L  +        + A+L         + E       
Sbjct: 9   ITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSGCGLRLLEEPARKIIP 62

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAK----GGNVTREPGPLKGGTTHIAFVKDPDGY 140
                G       I   D+  L   +         +       +  G      V+ PDG 
Sbjct: 63  D----GIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREF-QVRMPDGD 117

Query: 141 IFELIQ 146
                 
Sbjct: 118 WLNFTA 123

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 20/118 (16%), Positives = 34/118 (28%), Gaps = 15/118 (12%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAE-EDQTTVLELTYNYGVTE 216
            L + D+  ++  +   LG +L                 YA  E     L L        
Sbjct: 12  FLHIPDMQEALTLFCDTLGFELKYRHS-----------NYAYLELSGCGLRLLEEPARKI 60

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP-GLNTKITSFVDPDG 273
              G A   + I   D+      ++   + L         ++P G   +      PDG
Sbjct: 61  IPDGIARVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYG--QREFQVRMPDG 116

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A Length = 126

 Score = 50.7 bits (121), Expect = 3e-08
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 20/130 (15%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                  D D T  FY    G  ++ +            L  G     F       +   
Sbjct: 6   TPNLPSRDFDSTAAFYER-LGFGIVFRDA------GWMILQRGDLMLEF-------FAHP 51

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT------HIAFVKDPDG 139
             D    +    +  +D+ +     ++ G   T    P             +A + DPDG
Sbjct: 52  GLDPLASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDG 111

Query: 140 YIFELIQRGP 149
            +  LIQ   
Sbjct: 112 TLLRLIQNEL 121

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila} Length = 148

 Score = 50.9 bits (121), Expect = 3e-08
 Identities = 19/133 (14%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
             ++ V +  ++ +FY      + +      E   + A            + L     + 
Sbjct: 9   LVLFYVKNPAKSEEFYKNLLDTQPI------ESSPTFAMFVMKTG---LRLGLWAQEEIE 59

Query: 86  -SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                  G    +      E V ++      K  ++ + P  +  G T      DPD + 
Sbjct: 60  PKAHQTGGGMELSFQVNSNEMVDEIHRQWSDKEISIIQPPTQMDFGYT--FVGVDPDEHR 117

Query: 142 FELIQRGPTPEPL 154
             +     T E L
Sbjct: 118 LRIFCLKRTAENL 130

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 50.8 bits (121), Expect = 3e-08
 Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 15/129 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
                +  V +   + +FY    G+         E   + +            + L   +
Sbjct: 25  HPDFTILYVDNPPASTQFYKALLGVD------PVESSPTFSLFVLANG---MKLGLWSRH 75

Query: 83  GVT-SYDIGTGFGHFAIA---TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
            V     +  G G  A        V +     +A G  + ++P  ++ G T      DPD
Sbjct: 76  TVEPKASVTGGGGELAFRVENDAQVDETFAGWKASGVAMLQQPAKMEFGYT--FTAADPD 133

Query: 139 GYIFELIQR 147
            +   +   
Sbjct: 134 SHRLRVYAF 142

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens} Length = 144

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 23/131 (17%), Positives = 41/131 (31%), Gaps = 14/131 (10%)

Query: 144 LIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQT 203
           L  +G    P    +L V +   S +FY+  LG+        P +               
Sbjct: 17  LYFQGHMTHPD-FTILYVDNPPASTQFYKALLGVD--PVESSPTF-------SLFVLANG 66

Query: 204 TVLELTYNYGVTEYTKGNA-YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN 262
             L L   + V           ++A   ++  +  E      +  G  + +QP  +    
Sbjct: 67  MKLGLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFAGW-KASGVAMLQQPAKMEFGY 125

Query: 263 TKITSFVDPDG 273
           T   +  DPD 
Sbjct: 126 T--FTAADPDS 134

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A* Length = 393

 Score = 52.2 bits (124), Expect = 6e-08
 Identities = 46/271 (16%), Positives = 86/271 (31%), Gaps = 49/271 (18%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
            K ++ RFL      + VG+  +   FY    G + L  R +               +  
Sbjct: 2   AKPERGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYN-----YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--G 126
           FV+    N      G      G G    A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLSSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKF 121

Query: 127 GTTHIAFVKDPDGYIFELIQRG-----------------PTPEPLCQVMLRV-------- 161
           G    A ++        L+++                  P    L +  L +        
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDPLLPKLPKCSLEMIDHIVGNQ 181

Query: 162 --GDLGRSIKFYEKALGMKLLRTVDKPEY--KYTL----AMLGYAEEDQTTVLELTYNYG 213
              ++  + ++Y K L      +VD  +   +Y+      +  Y E  +  + E      
Sbjct: 182 PDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGKK 241

Query: 214 VT------EYTKGNAYAQVAISTDDVYKSAE 238
            +      +Y  G     +A+ T+D+  +  
Sbjct: 242 KSQIQEYVDYNGGAGVQHIALKTEDIITAIR 272

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B* Length = 292

 Score = 51.9 bits (124), Expect = 7e-08
 Identities = 24/174 (13%), Positives = 50/174 (28%), Gaps = 32/174 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +  + V D+     F T+  G+               A      +++  +       G  
Sbjct: 7   YLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYR-ADQRAWRIA---VQPGEL 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFE 143
                 G          + ++ + +R  G   TR    L  +     +  ++DP G   E
Sbjct: 57  DDLAYAGLE--VDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLE 114

Query: 144 LI------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +                         + +   +  V D  +++ FY + LG  L
Sbjct: 115 IYYGPAEIFHEPFLPSAPVSGFVTGDQGIGHFVRCVPDTAKAMAFYTEVLGFVL 168

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 51.1 bits (122), Expect = 1e-07
 Identities = 32/276 (11%), Positives = 72/276 (26%), Gaps = 51/276 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V +LD    +     GM++     V + +    +L         V+         
Sbjct: 9   YLGLSVSNLDAWRDYAAGIMGMQV-----VDDGEDDRIYLRMDRWHHRIVLH-------- 55

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGY 140
             D      +         ++ +L E ++  G                  +  + DP G 
Sbjct: 56  -ADGSDDLAYIGWRVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGN 114

Query: 141 IFELI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL-- 179
             E+                    +     + L  +++R  D+  + +FY          
Sbjct: 115 PTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGLGHIIIREDDVEEATRFYRLLGLEGAVE 174

Query: 180 LRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEV 239
            +         T   +   +   +    +          + N         DD+  + ++
Sbjct: 175 YKFALPNGAVGTPVFMHCNDRHHSLAFGVG-----PMDKRINHLMIEYTHLDDLGYAHDL 229

Query: 240 VNLVTQELGGKITRQPGS-IPGLNTKITSFVDPDGW 274
           V    ++    +T Q G              +P GW
Sbjct: 230 V----RQQKIDVTLQIGKHSNDEALTFY-CANPSGW 260

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A Length = 305

 Score = 39.2 bits (91), Expect = 9e-04
 Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 13/129 (10%)

Query: 21  KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
            +   H + R  D++   +FY        +  +           +       H      +
Sbjct: 144 GQGLGHIIIREDDVEEATRFYRLLGLEGAVEYKFALPNGAVGTPVFMHCNDRH------H 197

Query: 81  NYGVTSYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VK 135
           +       +     H  I      D+    + +R +  +VT + G  K            
Sbjct: 198 SLAFGVGPMDKRINHLMIEYTHLDDLGYAHDLVRQQKIDVTLQIG--KHSNDEALTFYCA 255

Query: 136 DPDGYIFEL 144
           +P G+++E 
Sbjct: 256 NPSGWLWEP 264

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans} Length = 148

 Score = 48.9 bits (116), Expect = 1e-07
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 4/124 (3%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY 87
           VY   D+D+T+K++ E  G          E       +   P +        +       
Sbjct: 26  VYFTKDMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFK 85

Query: 88  DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI---FEL 144
                     +  E +  L + ++  G +   +      G    + +   DG I   FE 
Sbjct: 86  GEPIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGARECS-ITTTDGCILRFFES 144

Query: 145 IQRG 148
           IQ G
Sbjct: 145 IQEG 148

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A Length = 302

 Score = 49.2 bits (117), Expect = 6e-07
 Identities = 25/175 (14%), Positives = 50/175 (28%), Gaps = 33/175 (18%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           +    V D D    F T+  G+++     + E +    +L         VV     +   
Sbjct: 12  YMGISVKDPDAWKSFATDMLGLQV-----LDEGEKDRFYLRMDYWHHRIVVH----HNGQ 62

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFE 143
                 G+        +   L + +   G  +         +     +   +DP G   E
Sbjct: 63  DDLEYLGWR--VAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTE 120

Query: 144 LI-------------------QRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMKL 179
           +                    +     + L   ++R  D+  + KFY   LG + 
Sbjct: 121 IFWGPRIDMSNPFHPGRPLHGKFVTGDQGLGHCIVRQTDVAEAHKFYSL-LGFRG 174

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A* Length = 132

 Score = 46.5 bits (110), Expect = 9e-07
 Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 12/122 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
             +  V +++R+  FY   F  +       P               + F +       V 
Sbjct: 16  LQLVYVSNVERSTDFYRFIFKKE-------PVFVTPRYVAFPSSGDALFAIWSGGEEPVA 68

Query: 86  SYDIGTGFGHFAIATEDV---YKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
                +  G      EDV   +      ++    V +EP     G      + DPDG+I 
Sbjct: 69  EIPRFSEIGIMLPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHII 126

Query: 143 EL 144
            +
Sbjct: 127 RV 128

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 21/136 (15%), Positives = 34/136 (25%), Gaps = 11/136 (8%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-------AFLGFGPEQSHFVVEL 78
             +     +   + FY   FG         P+ K          + L             
Sbjct: 29  MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVS 88

Query: 79  TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
           +     T+   G+G   F + T+D    V      G                   V DP 
Sbjct: 89  SLPGFSTAKSEGSGV-TFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVEL-GFKGKVTDPF 146

Query: 139 GYIFELIQRG--PTPE 152
           G  +   ++    T E
Sbjct: 147 GVTWIFAEKKTVITDE 162

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A Length = 124

 Score = 43.4 bits (102), Expect = 7e-06
 Identities = 17/125 (13%), Positives = 31/125 (24%), Gaps = 8/125 (6%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
              V    D+   ++F+T+  G          E+ +  A +                   
Sbjct: 7   AVPVLTARDVAEAVEFWTDRLGFSR----VFVEDDF--AGVVRDDVTLFISAVQDQVVPD 60

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E      G      ++DP G     
Sbjct: 61  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 118

Query: 145 IQRGP 149
           +    
Sbjct: 119 VAEEQ 123

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.5 bits (104), Expect = 3e-05
 Identities = 47/335 (14%), Positives = 96/335 (28%), Gaps = 83/335 (24%)

Query: 3   EASPAAANAELLEWPKKDKRRFLHAVYRVGDLDRTI--KFYTECF-----GMKLLRKRDV 55
            +       + +E   +   +FL +  +      ++  + Y E         ++  K +V
Sbjct: 72  LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNV 131

Query: 56  P-EEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIR 111
              + Y     A L   P ++  +       GV       G G   +A + V    +   
Sbjct: 132 SRLQPYLKLRQALLELRPAKNVLI------DGVL------GSGKTWVALD-VCLSYKVQC 178

Query: 112 AKGGNVTREPGPLKGGTTH---IAFVKDPDGYIFELIQRGPTPEPLCQVM----LRVGDL 164
                +                +     P+  + E++Q+      L   +        D 
Sbjct: 179 KMDFKI------------FWLNLKNCNSPET-VLEMLQK------LLYQIDPNWTSRSDH 219

Query: 165 GRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED-------------QTTVLELTYN 211
             +IK    ++  +L R +    Y+  L +L                      +L  T  
Sbjct: 220 SSNIKLRIHSIQAELRRLLKSKPYENCLLVL-----LNVQNAKAWNAFNLSCKILLTTRF 274

Query: 212 YGVTEYTKGNAYAQVAIS-TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN-------- 262
             VT++        +++          EV +L+ + L  +    P  +   N        
Sbjct: 275 KQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334

Query: 263 TKITSFVD-PDGWKTVLVDN-----EDFLKEIQSE 291
             I   +   D WK V  D      E  L  ++  
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPA 369

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3 Length = 381

 Score = 41.4 bits (96), Expect = 2e-04
 Identities = 39/263 (14%), Positives = 74/263 (28%), Gaps = 46/263 (17%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 21  KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 80

Query: 82  YGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREP--GPLKGGTTHI 131
                           G G    AI   D           G     EP     + GT  +
Sbjct: 81  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 140

Query: 132 AFVKDPDGYIFELIQRG--------------PTPEPLCQVMLRV----------GDLGRS 167
           A +         L+ R               P  EP      +           G +   
Sbjct: 141 AAIATYGKTRHTLVDRTGYDGPYLPGYVAAAPIVEPPAHRTFQAIDHCVGNVELGRMNEW 200

Query: 168 IKFYEKALGMKLLRTVDKPEY--KYTL----AMLGYAEEDQTTVLELTYNYGVT------ 215
           + FY K +G   ++     +   +Y+      +     + +  + E       +      
Sbjct: 201 VGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL 260

Query: 216 EYTKGNAYAQVAISTDDVYKSAE 238
           E+  G     +A++T D+ ++  
Sbjct: 261 EFYGGAGVQHIALNTGDIVETVR 283

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A Length = 424

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 36/277 (12%), Positives = 74/277 (26%), Gaps = 60/277 (21%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +RF H  +  GD     + ++   GM+   K D+      +A          F+    Y+
Sbjct: 24  KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYS 83

Query: 82  YGVTSYDI-----------------------GTGFGHFAIATEDVYKLVENIRAKGGNVT 118
             +++ +I                       G G    AI  ED         A G   +
Sbjct: 84  PSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPS 143

Query: 119 REPGPLKG----------GTTHIAFVKDPDGYIFELI--------------QRGPTPEPL 154
             P  L            G   + +V        +                        L
Sbjct: 144 SPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTEKSEFLPGFERVEDASSFPLDYGIRRL 203

Query: 155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK------YTLAMLGYAEEDQTTVLEL 208
              +  V +LG ++ +     G          +         +  +    E     + E 
Sbjct: 204 DHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEP 263

Query: 209 TYNYGVT-------EYTKGNAYAQVAISTDDVYKSAE 238
            +            E+ +G     +A+ ++D++++  
Sbjct: 264 VHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLR 300

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	291
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	100.0
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	100.0
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	100.0
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	100.0
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	100.0
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	100.0
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	100.0
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	100.0
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	100.0
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	100.0
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	100.0
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	100.0
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	100.0
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	100.0
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	100.0
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.97
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.97
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.94
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.94
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.93
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.86
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.85
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.85
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.84
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.83
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.83
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.82
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.82
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.82
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.81
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.8
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.8
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.8
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.8
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.79
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.79
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.79
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.79
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.79
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.78
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.78
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.78
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.78
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.78
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.78
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.78
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.78
3ghj_A	141	Putative integron gene cassette protein; integron	99.77
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.77
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.76
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.75
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.75
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.74
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.74
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.74
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.74
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.74
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.74
2i7r_A	118	Conserved domain protein; structural genomics cons	99.73
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.73
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.73
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.73
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.73
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.73
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.72
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.72
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.72
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.72
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.71
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.71
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.71
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.71
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.71
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.71
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.71
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.71
2i7r_A	118	Conserved domain protein; structural genomics cons	99.71
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	99.71
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.71
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.71
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.71
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.7
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.7
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.7
3ghj_A	141	Putative integron gene cassette protein; integron	99.7
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.7
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.7
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.7
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.69
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.69
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.69
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.69
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.68
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.68
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.68
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.68
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.68
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.68
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.68
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.67
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.67
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.67
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.67
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.67
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.66
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.66
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.65
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.65
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.65
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.65
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.65
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.64
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.64
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.64
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.64
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.64
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.63
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.63
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.62
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.62
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.62
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.62
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.62
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.62
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.61
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.6
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.59
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.59
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.58
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.57
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.57
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.56
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.55
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.55
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.54
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.52
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.51
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.5
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.5
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.49
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	99.47
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.46
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.44
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.43
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.42
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.41
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.37
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.36
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	99.3
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.26
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.23
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.22
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	99.18
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.18
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.16
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	99.11
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.1
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.09
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.06
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	98.76
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.69
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.17
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	98.05
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.55
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	97.25
3p8a_A	274	Uncharacterized protein; mainly antiparallel beta	90.22
3opy_A	989	6-phosphofructo-1-kinase alpha-subunit; ATP bindin	84.47

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=100.00  E-value=4.3e-35  Score=251.47  Aligned_cols=249  Identities=33%  Similarity=0.570  Sum_probs=187.8

Q ss_pred             CCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC-----------CCceeeEEEecCCCCceeEEEeeccCC
Q 022871           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP-----------EEKYSNAFLGFGPEQSHFVVELTYNYG   83 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (291)
                      ...+|++++++|++|.|+|++++++||+++|||++..+...+           ++.+..+++.+++......+++..+..
T Consensus        19 ~~~~M~~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~   98 (330)
T 3zi1_A           19 YFQSMAARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYG   98 (330)
T ss_dssp             CGGGCSCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETT
T ss_pred             eeeecccceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCC
Confidence            344567889999999999999999999999999998876654           445667777776555556677665544


Q ss_pred             CCcccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC-CCCCceeEEeeeC
Q 022871           84 VTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-TPEPLCQVMLRVG  162 (291)
Q Consensus        84 ~~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~-~~~~~~hv~l~v~  162 (291)
                      ...+..+.|+.|++|.|+|+   +++++++|+++...+    + .  .++|+||||+.|||++... .+.++.|+.|.|.
T Consensus        99 ~~~~~~~~g~~hiaf~V~d~---~~~l~~~G~~~~~~~----~-~--~~~~~DPdG~~iel~~~~~~~~~~i~hv~L~v~  168 (330)
T 3zi1_A           99 VGDYKLGNDFMGITLASSQA---VSNARKLEWPLTEVA----E-G--VFETEAPGGYKFYLQNRSLPQSDPVLKVTLAVS  168 (330)
T ss_dssp             CCCCCBCSSEEEEEEECHHH---HHHHHHHTCCCEEEE----T-T--EEEEECTTSCEEEEESSCCTTSCSEEEEEEEES
T ss_pred             CCccccCCCeeEEEEECchH---HHHHHHcCCceeccC----C-c--eEEEECCCCCEEEEEecCCCCCCceeEEEEECC
Confidence            44555667999999999987   678889999877543    2 2  4889999999999999764 4678999999999


Q ss_pred             CccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec--chhhhHHHH
Q 022871          163 DLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD--DVYKSAEVV  240 (291)
Q Consensus       163 D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~--di~~~~~~l  240 (291)
                      |++++.+||+++|||++.......+    ..++..++.  ...+++......  ...+++..|++|.|+  |++++++++
T Consensus       169 Dl~~a~~FY~~vLG~~~~~~~~~~~----~~~l~~g~~--~~~l~l~~~~~~--~~~~~~~~hiaf~v~~~dld~~~~rl  240 (330)
T 3zi1_A          169 DLQKSLNYWCNLLGMKIYENDEEKQ----RALLGYADN--QCKLELQGVKGG--VDHAAAFGRIAFSCPQKELPDLEDLM  240 (330)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEETTTT----EEEEESSTT--SCEEEEEECSSC--CCCBTTCCEEEEEECGGGHHHHHHHH
T ss_pred             CHHHHHHHHHHhcCCEEEeeccCCc----EEEEEeCCc--eEEEEECCCCCC--CCCCCCCceEEEEEEcccHHHHHHHH
Confidence            9999999999999999876543322    233443332  455666543321  123457789999995  567777777


Q ss_pred             HHHHHHhCCeeecCCccc--C-CCCceEEEEECCCCCeEEEEechhhh
Q 022871          241 NLVTQELGGKITRQPGSI--P-GLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       241 ~~~~~~~G~~~~~~p~~~--~-~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                          +++|+++..+|...  + ..+.+.+||+||||++|||+++..+.
T Consensus       241 ----~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~~~~  284 (330)
T 3zi1_A          241 ----KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDEAFR  284 (330)
T ss_dssp             ----HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHHHHH
T ss_pred             ----HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEecccc
Confidence                99999987776542  2 11358899999999999999987654

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=100.00  E-value=1.3e-33  Score=241.91  Aligned_cols=238  Identities=20%  Similarity=0.230  Sum_probs=175.6

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      +++++++++|+.|.|+|++++.+||+++|||++..+..      ...++...+......+.+...       ...++.|+
T Consensus        11 ~~~~i~~l~hv~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l~l~~~-------~~~~~~~~   77 (323)
T 1f1u_A           11 PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE------NTIYLRSLEEFIHHNLVLRQG-------PIAAVAAF   77 (323)
T ss_dssp             CCCCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEE
T ss_pred             CCcccceeeEEEEEeCCHHHHHHHHHhCCCCEEeeecC------CEEEEEecCCCCcEEEEEEEC-------CCCCeeEE
Confidence            44679999999999999999999999999999876532      134555322221122223221       12478899


Q ss_pred             EEEe---CCHHHHHHHHHHcCCeEecCCc-ccCCCceEEEEEECCCCCEEEEEeCCCC---------------CCCceeE
Q 022871           97 AIAT---EDVYKLVENIRAKGGNVTREPG-PLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQV  157 (291)
Q Consensus        97 ~~~v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~dp~G~~iel~~~~~~---------------~~~~~hv  157 (291)
                      +|.|   +|+++++++|+++|+++...+. ..+++.. .++|+||+|+.+||++....               +.++.|+
T Consensus        78 ~f~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~-~~~~~DP~G~~iel~~~~~~~~~~~~~~~~~~~~~~~~l~Hv  156 (323)
T 1f1u_A           78 AYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGD-SVRVEDPLGFPYEFFYETEHVERLTQRYDLYSAGELVRLDHF  156 (323)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCS-EEEEECTTSCEEEEECCBCCCCCCTTCGGGCCTTCCCEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCcEEeccccccCCcce-EEEEECCCCCEEEEEEecccccccccccccCCCCCCceeeeE
Confidence            9999   7899999999999999877655 3334334 48899999999999976421               3468999


Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh--
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK--  235 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~--  235 (291)
                      .|.|+|++++.+|| ++|||++.......++.....++..+..  ++.+.+...       .+++++|++|.|+|+++  
T Consensus       157 ~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~--~~~~~~~~~-------~~~~~~Hiaf~v~d~d~v~  226 (323)
T 1f1u_A          157 NQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTGG-------NGPRMHHVAFATHEKHNII  226 (323)
T ss_dssp             EEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEES-------SBSEEEEEEEECSSHHHHH
T ss_pred             EEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCC--cccEEEeCC-------CCCCceEEEEECCCHHHHH
Confidence            99999999999999 9999998766544443334455554332  333444321       12488999999999888  


Q ss_pred             -hHHHHHHHHHHhCC--eeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          236 -SAEVVNLVTQELGG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       236 -~~~~l~~~~~~~G~--~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                       +++++    +++|+  ++...|.++..++++++|++||+||+|||+...
T Consensus       227 ~~~~~l----~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          227 QICDKM----GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             HHHHHH----HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHH----HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence             66666    99999  888777776655568899999999999998643

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=100.00  E-value=1.3e-33  Score=243.38  Aligned_cols=239  Identities=14%  Similarity=0.147  Sum_probs=175.9

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEec-CCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-GPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      +..+++|+||.|.|+|++++.+||+++|||++..+...      ..++.. ++... ..+.+...       ...++.|+
T Consensus         6 ~~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~------~~~l~~~~~~~~-~~l~l~~~-------~~~g~~~~   71 (339)
T 3lm4_A            6 RFDIAHLARAELFSPKPQETLDFFTKFLGMYVTHREGQ------SVYLRGYEDPYP-WSLKITEA-------PEAGMGHA   71 (339)
T ss_dssp             GGSEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEEETT------EEEEECTTCSSS-CSEEEEEC-------SSCEEEEE
T ss_pred             CCCCcEEEEEEEEeCCHHHHHHHHHhcCCCEEEEecCC------EEEEEecCCCCc-eEEEEeeC-------CCCCcceE
Confidence            34699999999999999999999999999999876321      344443 22221 12222221       13478999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC------------------------
Q 022871           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP------------------------  149 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~------------------------  149 (291)
                      +|.|+|   +++++++|+++|+++...+. ..++.. .++|+||+|+.|||+....                        
T Consensus        72 af~v~~~~dld~~~~~l~~~G~~~~~~~~-~~~~~~-~~~f~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  149 (339)
T 3lm4_A           72 AMRTSSPEALERRAKSLTDGNVDGTWSED-QFGYGK-TFEYQSPDGHNLQLLWEAEKYVAPPELRSKILTRPSKKPLQGI  149 (339)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEECC-STTBCC-EEEEECTTCCEEEEECCBCCCCCCGGGCCSSTTCSSCCCSBSS
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCceeeccC-CCCceE-EEEEECCCCCEEEEEEeeeEcCCCccccccccCcccccCCCCC
Confidence            999987   88999999999999876554 233233 4889999999999986521                        


Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++..... .++.....++..+..  .+.+.+.....    ...++++|++|.
T Consensus       150 ~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~--~~~l~~~~~~~----~~~~~~~Hiaf~  222 (339)
T 3lm4_A          150 PVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLL--GHEVACMRDMT----GGHGKLHHLAFF  222 (339)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSS--SCSEEEEECTT----SCCSEEEEEEEE
T ss_pred             CcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCC--ceEEEEeccCC----CCCCceeEEEEE
Confidence            23468999999999999999999999999887654 233334555554332  34455544211    134578999999


Q ss_pred             ecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |+|   +++++++|    +++|+++..+|.++..++++++|++||+||+|||+...+
T Consensus       223 v~d~~~v~~~~~~l----~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~~  275 (339)
T 3lm4_A          223 YGTGQHNIDAVEMF----RDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEAG  275 (339)
T ss_dssp             CCCHHHHHHHHHHH----HHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCCC
T ss_pred             eCCHHHHHHHHHHH----HHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcCC
Confidence            999   66666666    999999998888766655688999999999999986544

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=100.00  E-value=9.2e-33  Score=235.33  Aligned_cols=241  Identities=17%  Similarity=0.169  Sum_probs=172.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEec-CCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF-GPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      |.+++|+||.|.|+|++++.+||+++|||++..+..  .+   ..++.. +... ...+.+...       ...++.|++
T Consensus         4 ~~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~--~~---~~~l~~~~~~~-~~~l~l~~~-------~~~~~~h~a   70 (309)
T 3hpy_A            4 TGVLRPGHAQVRVLNLEEGIHFYRNVLGLVETGRDD--QG---RVYFKCWDERD-HSCYIIREA-------DTAGIDFFG   70 (309)
T ss_dssp             CSEEEEEEEEEEESSHHHHHHHHHHTSCCEEEEECT--TS---CEEEECTTCCB-SCSEEEEEC-------SSCEEEEEE
T ss_pred             cccceeeEEEEEcCCHHHHHHHHHhccCCEEEEEcC--CC---eEEEEeccCCC-ceEEEEEeC-------CCCceeEEE
Confidence            458999999999999999999999999999987642  11   244443 3222 122222221       123789999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEecCCcc-cCCCceEEEEEECCCCCEEEEEeCCC----------------------CC
Q 022871           98 IATED---VYKLVENIRAKGGNVTREPGP-LKGGTTHIAFVKDPDGYIFELIQRGP----------------------TP  151 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~-~~~g~~~~~~~~dp~G~~iel~~~~~----------------------~~  151 (291)
                      |.|+|   +++++++|+++|+++...+.. ..++. ..++|+||+||.|||+....                      .+
T Consensus        71 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~f~DPdG~~iel~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  149 (309)
T 3hpy_A           71 FKVLDKATLEKLDADLQAYGLTTTRIPAGEMLETG-ERVRFELPSGHLIELYAEKTCVGNGISEVNPAPWNAQREHGIAP  149 (309)
T ss_dssp             EEESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBC-CEEEEECTTSCEEEEESCBCBCCCSSCSBSCCSCCGGGGSSSCC
T ss_pred             EEECCHHHHHHHHHHHHhCCCceeeccCCccCCCe-eEEEEECCCCCEEEEEEccceecccccccCCCCCccccCCCccc
Confidence            99986   899999999999998765442 22333 35899999999999998542                      13


Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-cceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..+.|+.|.|+|++++.+||+++|||++.......+ +.....++..+..  ...+.+...      +..++.+|++|.|
T Consensus       150 ~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~Hiaf~v  221 (309)
T 3hpy_A          150 IQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHK--VHDIAFVEY------PEKGKLHHCSFLL  221 (309)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSS--SCSEEEEEC------SSTTEEEEEEEEC
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCC--ceeEEEecC------CCCCceeEEEEEC
Confidence            458999999999999999999999999876544332 2234455554332  233333321      1234689999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +|++++.+. +++|+++|+++...|.+++.++.+++|++||+||+|||+...
T Consensus       222 ~d~~~v~~~-~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          222 ESWEQVLRA-GDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             SSHHHHHHH-HHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             CCHHHHHHH-HHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            986654433 344499999998888877665568899999999999998763

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=100.00  E-value=2.1e-32  Score=234.75  Aligned_cols=247  Identities=11%  Similarity=0.056  Sum_probs=167.1

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-CceeeEEEecCCCCceeEEEeeccCCCCccc-CCCCeeEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYD-IGTGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~i   96 (291)
                      |++++|+||+|.|+|++++.+||+++|||++..+....+ .+....+++.........+.+.......... ...++.|+
T Consensus         4 ~~i~~i~Hv~l~v~Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hi   83 (335)
T 3oaj_A            4 KKTMGIHHITAIVGHPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVT   83 (335)
T ss_dssp             CCCCSEEEEEEEESCHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             ccCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEE
Confidence            579999999999999999999999999999988753322 2222334433222212334443322221112 23468999


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC---------------CCCceeEEe
Q 022871           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT---------------PEPLCQVML  159 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~---------------~~~~~hv~l  159 (291)
                      +|.|+  |+++++++|+++|+.+..  ... .+. ..+||+||||+.+||++....               ...+.||.|
T Consensus        84 af~V~~~dl~~~~~rL~~~Gv~~~~--~~~-~g~-~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~v~~~~~i~gl~Hv~L  159 (335)
T 3oaj_A           84 SYVVPKGAMAFWEKRLEKFNVPYTK--IER-FGE-QYVEFDDPHGLHLEIVEREEGEANTWTFGEVTPDVAIKGFGGATL  159 (335)
T ss_dssp             EEEECTTCHHHHHHHHHHTTCCCEE--EEE-TTE-EEEEEECTTSCEEEEEECSCSCCCCCCBTTBCTTTSCCEEEEEEE
T ss_pred             EEEecHHHHHHHHHHHHhCcceeee--ecc-CCc-EEEEEECCCCCEEEEEEeCCCCcCCCcCCCCChhhhhccccceEE
Confidence            99999  999999999999998764  222 233 458999999999999987531               135899999


Q ss_pred             eeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEEEecchhhhHH
Q 022871          160 RVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       160 ~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~~v~di~~~~~  238 (291)
                      .|+|++++.+||+++|||++.....    ....+  ..+..  ...+.+....+... .++.++++|+||.|+|.++ +.
T Consensus       160 ~v~Dle~t~~FY~~vLG~~~~~~~~----~~~~~--~~g~~--~~~l~l~~~~~~~~~~~g~g~~~HiAf~v~d~~~-l~  230 (335)
T 3oaj_A          160 LSEQPDKTADLLENIMGLERVGKEG----DFVRY--RSAGD--IGNVIDLKLTPIGRGQMGAGTVHHIAWRANDDED-QL  230 (335)
T ss_dssp             ECSSHHHHHHHHHHTSCCEEEEEET----TEEEE--ECSSS--SSCEEEEESSCCCBCBCSBTEEEEEEEEESSHHH-HH
T ss_pred             EECCHHHHHHHHHHHhCCEEeeccC----CEEEE--EeCCC--CcEEEEEeCCCCCcCCCCCcceEEEEEEcCCHHH-HH
Confidence            9999999999999999999876531    12222  21221  23344443222111 1223468999999999433 23


Q ss_pred             HHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      .+.++|+++|+++... ....+  .+.+||+||+|++|||+..
T Consensus       231 ~~~~~L~~~G~~~~~~-~~r~~--~~siYfrDP~G~~iEl~td  270 (335)
T 3oaj_A          231 DWQRYIASHGYGVTPV-RDRNY--FNAIYFREHGEILFEIATD  270 (335)
T ss_dssp             HHHHHHHHTTCCCCCC-EECSS--SEEEEEECTTSCEEEEEES
T ss_pred             HHHHHHHHCCCCcccc-ccCCc--EEEEEEECCCCcEEEEEeC
Confidence            3334449999986433 33222  4789999999999999986

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.6e-32  Score=230.51  Aligned_cols=242  Identities=19%  Similarity=0.199  Sum_probs=170.7

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC-ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ...+.|+.|.|+|++++++||+++|||++......... .+.  .+..+. ..  ...+.......+ .......+++|.
T Consensus        30 ~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~--~~~~~g-~~--~~~l~~~~~~~~-~~~~~~~~~~~~  103 (282)
T 3oxh_A           30 QGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYS--MATLNG-EA--VAAIAPMPPGAP-EGMPPIWNTYIA  103 (282)
T ss_dssp             TTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEE--EEEETT-EE--EEEEEECCSCC----CCCEEEEEEE
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEE--EEEeCC-ee--eEeeccCCCCCC-CCCCCcEEEEEE
Confidence            45799999999999999999999999998765332110 222  233222 11  122221111111 122355789999


Q ss_pred             eCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC--------CCCCceeEEeeeCCccccHHHH
Q 022871          100 TEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP--------TPEPLCQVMLRVGDLGRSIKFY  171 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~--------~~~~~~hv~l~v~D~~~~~~Fy  171 (291)
                      |+|+++++++|+++|+++..+|...++.. ++++|+||+||.|+|++...        .+..+.|+.|.|.|++++.+||
T Consensus       104 v~d~d~~~~~l~~~G~~~~~~p~~~~~~g-~~~~~~DP~G~~i~l~~~~~~~~~~~~~~~~~~~~~~l~v~D~~~a~~FY  182 (282)
T 3oxh_A          104 VDDVDAVVDKVVPGGGQVMMPAFDIGDAG-RMSFITDPTGAAVGLWQANRHIGATLVNETGTLIWNELLTDKPDLALAFY  182 (282)
T ss_dssp             CSCHHHHHTTTTTTTCEEEEEEEEETTTE-EEEEEECTTCCEEEEEEESSCCSCSBCSSTTSEEEEEEECSCHHHHHHHH
T ss_pred             eCCHHHHHHHHHHCCCEEEECCEecCCCe-EEEEEECCCCCEEEEEEccccCCccccCCCCccEEEEEEcCCHHHHHHHH
Confidence            99999999999999999988777766433 45899999999999999764        2467999999999999999999


Q ss_pred             HhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHHHHHHHHHHhCCee
Q 022871          172 EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKI  251 (291)
Q Consensus       172 ~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~  251 (291)
                      +++|||++.......+..+..+...  .   .....+.. ...   ...++.+|++|.|+|++++++++    +++|+++
T Consensus       183 ~~vlG~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~-~~~---~~~~~~~~~~~~v~dvd~~~~~~----~~~G~~~  249 (282)
T 3oxh_A          183 EAVVGLTHSSMEIAAGQNYRVLKAG--D---AEVGGCME-PPM---PGVPNHWHVYFAVDDADATAAKA----AAAGGQV  249 (282)
T ss_dssp             HHHHCCEEEEC-------CEEEEET--T---EEEEEEEC-CSS---TTCCSEEEEEEECSCHHHHHHHH----HHTTCEE
T ss_pred             HHHhCCeeeeccCCCCcceEEEEcC--C---ccEeeecC-CCC---CCCCCeEEEEEEeCCHHHHHHHH----HHcCCEE
Confidence            9999999765321222334433322  1   11122211 111   22346789999999999999999    9999999


Q ss_pred             ecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          252 TRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       252 ~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ..+|...++ +++++|++||+||+|||++..+
T Consensus       250 ~~~p~~~~~-~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          250 IAEPADIPS-VGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             EEEEEEETT-TEEEEEEECTTSCEEEEEEEC-
T ss_pred             ecCCeEcCC-CeEEEEEECCCCCEEEEEecCC
Confidence            999888776 4689999999999999999764

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=100.00  E-value=1.6e-32  Score=233.57  Aligned_cols=239  Identities=18%  Similarity=0.246  Sum_probs=168.5

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ++++++|+.|.|+|++++.+||+++|||++..+...  +   ..++..+.....+.+.+...       ..++..|++|.
T Consensus         4 ~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~--~---~~~l~~~~~~~~~~l~~~~~-------~~~~~~~~~f~   71 (307)
T 1mpy_A            4 GVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQ--G---RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGFK   71 (307)
T ss_dssp             SEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTT--S---CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHccCCEEEeecCC--C---cEEEEecCCCCceEEEEccC-------CCCCcceEEEE
Confidence            589999999999999999999999999999876431  1   24555433212222222211       12478999999


Q ss_pred             e---CCHHHHHHHHHHcCCeEecCCc-ccCCCceEEEEEECCCCCEEEEEeCCC----------------------CCCC
Q 022871          100 T---EDVYKLVENIRAKGGNVTREPG-PLKGGTTHIAFVKDPDGYIFELIQRGP----------------------TPEP  153 (291)
Q Consensus       100 v---~d~~~~~~~l~~~G~~~~~~~~-~~~~g~~~~~~~~dp~G~~iel~~~~~----------------------~~~~  153 (291)
                      |   +|+++++++|+++|+++...+. ..+++.. .++|+||+|+.+||++...                      ...+
T Consensus        72 v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (307)
T 1mpy_A           72 VVDEDALRQLERDLMAYGCAVEQLPAGELNSCGR-RVRFQAPSGHHFELYADKEYTGKWGLNDVNPEAWPRDLKGMAAVR  150 (307)
T ss_dssp             ESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCC-EEEEECTTSCEEEEESCBCBCCSTTCCSBSCCSSCSCCCTTCCCE
T ss_pred             eCCHHHHHHHHHHHHHcCCceecCCcccCCCceE-EEEEECCCCCEEEEEEcchhcccccccccCCcCCcccCCCCCcCc
Confidence            9   8999999999999999876654 2333333 4889999999999998531                      1235


Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc-
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD-  232 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d-  232 (291)
                      +.|+.|.|+|++++.+||+++|||++........+.....++.....  ...+.+...      +...+.+|++|.|+| 
T Consensus       151 i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------~~~g~~~hi~f~v~d~  222 (307)
T 1mpy_A          151 FDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTK--AHDVAFIHH------PEKGRLHHVSFHLETW  222 (307)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSB--SCSEEEEEC------SSSSEEEEEEEECSCH
T ss_pred             eeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCC--ceeEEEecC------CCCCcceEEEEEcCCH
Confidence            88999999999999999999999998765432222112223333222  223333321      112237999999995 


Q ss_pred             --hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          233 --VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 --i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                        ++++++++    +++|+++..+|..++.+.++.+||+||+||+|||++...
T Consensus       223 ~dv~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~  271 (307)
T 1mpy_A          223 EDLLRAADLI----SMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  271 (307)
T ss_dssp             HHHHHHHHHH----HHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHH----HHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEeccc
Confidence              55555666    999999888887765434588999999999999998643

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=100.00  E-value=2.6e-32  Score=236.40  Aligned_cols=241  Identities=21%  Similarity=0.207  Sum_probs=179.1

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..|.+|.||.|.|+|++++.+||+++|||++..+.+      ..+++...+......+.+...       ...++.|++|
T Consensus        13 p~I~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~------~~~~lr~~~~~~~~~l~l~~~-------~~~gl~~~a~   79 (365)
T 4ghg_A           13 PDILRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE------NQIYLRSFEEFIHHNLVLTKG-------PVAALKAMAF   79 (365)
T ss_dssp             CCEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCSSCSEEEEEC-------SSCEEEEEEE
T ss_pred             CCCCEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC------CEEEEEeCCCCcceEEEeccC-------CCCCcceEEE
Confidence            369999999999999999999999999999987743      145665543333322333321       2247899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC---------------CCCCceeEEee
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP---------------TPEPLCQVMLR  160 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~---------------~~~~~~hv~l~  160 (291)
                      .|.+   ++++.++|+++|+.+...+.....+....++|.||+|+.+||+....               .+.++.||.|.
T Consensus        80 ~v~s~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~~~~~~~~~~~~~~~~~~~rlgHV~L~  159 (365)
T 4ghg_A           80 RVRTPEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETTHVERLHMRYDLYSAGELVRLDHFNQV  159 (365)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCCCCTTCTTTCCTTCCCEEEEEEEE
T ss_pred             EeCCHHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEeeccccccccccccccccCcceeEEEEe
Confidence            9964   78899999999999875443322222234889999999999986542               13469999999


Q ss_pred             eCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHHHH
Q 022871          161 VGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAEVV  240 (291)
Q Consensus       161 v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~~l  240 (291)
                      |.|++++..||++ |||++.+.....++.....++.+...  ++.+.+..       ..+++++|++|.|+|+++..+. 
T Consensus       160 v~D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~--hH~la~~~-------~~~~~lhHvaf~v~d~d~v~~~-  228 (365)
T 4ghg_A          160 TPDVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGT--VHDTALTG-------GNGPRLHHVAFSTHEKHNIIQI-  228 (365)
T ss_dssp             ESCHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEECSSHHHHHHH-
T ss_pred             ecCHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCc--ccceeeec-------CCCCceeEEEEecCCHHHHHHH-
Confidence            9999999999965 99998877666665566667765443  34444433       1245899999999997776665 


Q ss_pred             HHHHHHhCCe--eecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          241 NLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       241 ~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      .++|.++|+.  +...|++|..+...++||+||+|++||+.....
T Consensus       229 ~d~l~~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          229 CDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             HHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             HHHHHhCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            3566888884  567888887766788999999999999976543

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=2.6e-32  Score=232.51  Aligned_cols=232  Identities=21%  Similarity=0.293  Sum_probs=174.4

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCC--CceeEEEeeccCCCCcccCCCCeeE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--QSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      .+.++++.|+.|.|+|++++.+||+++|||++..+..      ...++..++.  ...+  .+...       ...++.|
T Consensus         3 ~~~i~~l~~v~l~v~Dl~~a~~FY~~vlG~~~~~~~~------~~~~l~~~~~~~~~~l--~l~~~-------~~~~~~~   67 (310)
T 3b59_A            3 LSRVTEIRYVGYGVKDFDAEKAFYADVWGLEPVGEDA------NNAWFKAQGADEHHVV--QLRRA-------DENRIDV   67 (310)
T ss_dssp             CCCEEEEEEEEEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEECTTSCCSCSE--EEEEC-------SSCEEEE
T ss_pred             ceecceeeEEEEecCCHHHHHHHHHhCcCCEEeeecC------CeEEEEECCCCCCEEE--EEEEC-------CCCCeeE
Confidence            3579999999999999999999999999999876532      1355554331  2223  33221       1347889


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeEecCCcc--cCCCceEEEEEECCCCCEEEEEeCCC------------CCCCceeEE
Q 022871           96 FAIAT---EDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQRGP------------TPEPLCQVM  158 (291)
Q Consensus        96 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dp~G~~iel~~~~~------------~~~~~~hv~  158 (291)
                      ++|.|   +|+++++++|+++|+++...+..  .+++.. .++|+||+|+.++|++...            .+.++.|+.
T Consensus        68 ~~~~v~~~~dld~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~l~hv~  146 (310)
T 3b59_A           68 IALAADSRSDVDALRASVEAAGCKVASEPAVLATPGGGY-GFRFFSPDGLLFEVSSDVAKGAKRDLARWEGVPVKISHIV  146 (310)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBCCCSEECCSTTCCE-EEEEECTTSCEEEEEECCCCCCCCCCCTTCCCCCEEEEEE
T ss_pred             EEEEeCCHHHHHHHHHHHHhCCCeEeecCccccccCCce-EEEEECCCCCEEEEEEcccccCCCccCCCCCcCcEeceEE
Confidence            99998   78999999999999998877665  444444 4789999999999998653            235689999


Q ss_pred             eeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhh--
Q 022871          159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKS--  236 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~--  236 (291)
                      |.|+|++++.+||+++|||++.....  +   ...++..+..  +..+.+...      +  ++++|++|.|+|++++  
T Consensus       147 l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~--~~~l~l~~~------~--~g~~hi~f~v~d~d~~~~  211 (310)
T 3b59_A          147 LHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSA--HHRIAILPG------P--PCLNHVAYDMLSVDDMMR  211 (310)
T ss_dssp             EEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSB--SCSEEEEES------S--SEEEEEEEECSSHHHHHH
T ss_pred             EecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCC--cceEEEECC------C--CceEEEEEEcCCHHHHHH
Confidence            99999999999999999999876431  1   2233443222  334544331      1  4689999999997776  


Q ss_pred             -HHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          237 -AEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       237 -~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                       ++++    +++|+++...|.+++.++++++|++||+|+.|||.+....
T Consensus       212 ~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~  256 (310)
T 3b59_A          212 GAHRL----KVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELEE  256 (310)
T ss_dssp             HHHHH----HHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCCB
T ss_pred             HHHHH----HHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCccE
Confidence             6666    9999999888888765556889999999999999986543

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=100.00  E-value=1.6e-31  Score=230.37  Aligned_cols=247  Identities=12%  Similarity=0.073  Sum_probs=167.3

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-CceeeEEEecCCCCceeEEEeeccCCCCc-ccCCCCeeEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFA   97 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~   97 (291)
                      ++++|+||.|.|+|++++++||+++|||++..+....+ ......++..+.......+.+........ .....++.|++
T Consensus        27 ~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hia  106 (338)
T 1zsw_A           27 EIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIG  106 (338)
T ss_dssp             CCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEE
T ss_pred             cCccccEEEEEcCCHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEE
Confidence            58999999999999999999999999999887642111 11122223322111223343332211111 11234789999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC------------------CCCcee
Q 022871           98 IATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      |.|+   |+++++++|+++|+.+...+. . .|. ..++|+||||+.|||++....                  ..++.|
T Consensus       107 f~v~~~~dld~~~~~l~~~G~~~~~~~~-~-~G~-~~~~f~DPdG~~iel~~~~~~~~~~~~p~~~~~~~~~~~~~~l~h  183 (338)
T 1zsw_A          107 LLVPSEDSLHYWKERFEKFDVKHSEMTT-Y-ANR-PALQFEDAEGLRLVLLVSNGEKVEHWETWEKSEVPAKHQIQGMGS  183 (338)
T ss_dssp             EEESCHHHHHHHHHHHHHTTCEECCSEE-E-TTE-EEEEEECTTCCEEEEEECTTCCCTTCCCCTTCSSCGGGSCCEEEE
T ss_pred             EEcCCHHHHHHHHHHHHHCCCccccccc-c-CCc-EEEEEECCCCCEEEEEEcCCccccccCcCcCCCCCccccCceEEE
Confidence            9998   799999999999999876544 2 344 468999999999999987531                  235889


Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec---ch
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD---DV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~---di  233 (291)
                      +.|.|+|++++.+||+++|||++.....    .+..+... ..+.....+.+.. .........++++|++|.|+   |+
T Consensus       184 v~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~hiaf~v~~~~dv  257 (338)
T 1zsw_A          184 VELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSI-KGEAFGEIVVKYL-DGPTEKPGRGSIHHLAIRVKNDAEL  257 (338)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESS-TTCSTTCEEEEEC-CSSBCBCCBTCEEEEEEEESSHHHH
T ss_pred             EEEEECCHHHHHHHHHHhcCCEEEeecC----CeEEEEec-CCCCceEEEEecc-CCCCCCCCCCceEEEEEEeCCHHHH
Confidence            9999999999999999999999876432    12222221 0111012233322 11111112246799999998   57


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +++++++    +++|+++. +|....  +.+.+||+||+||+|||++..
T Consensus       258 ~~~~~~l----~~~G~~~~-~~~~~~--~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          258 AYWEEQV----KQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHHH----HHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHHH----HHCCCcee-eeeecC--ceEEEEEECCCCCEEEEEEcC
Confidence            7777777    99999984 555443  358899999999999999854

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=100.00  E-value=5.1e-32  Score=229.76  Aligned_cols=237  Identities=11%  Similarity=0.118  Sum_probs=169.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEE-eeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLR-KRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      |.+++|+|+.|.|+|++++.+||+++|||++.. +..   +   ..++..++....+  .+...       ...++.|++
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~---~---~~~~~~~~~~~~l--~l~~~-------~~~~~~~~~   65 (300)
T 2zyq_A            1 MSIRSLGYLRIEATDMAAWREYGLKVLGMVEGKGAPE---G---ALYLRMDDFPARL--VVVPG-------EHDRLLEAG   65 (300)
T ss_dssp             -CCCEEEEEEEEESCHHHHHHHHHHTSCCEECSSCCS---S---CEEEESSSSSCSE--EEEEC-------SSCEEEEEE
T ss_pred             CCcceEEEEEEEeCCHHHHHHHHHHccCCEEeccCCC---C---eEEEEeCCCcEEE--EEecC-------CCCCcceEE
Confidence            468999999999999999999999999999875 321   1   2455554332222  23221       134788999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEecCCccc---CCCceEEEEEECCCCCEEEEEeC-CC---------------CCCCce
Q 022871           98 IATED---VYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDGYIFELIQR-GP---------------TPEPLC  155 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dp~G~~iel~~~-~~---------------~~~~~~  155 (291)
                      |.|++   +++++++|+++|+++...+...   .++. ..++|+||+||.|||++. ..               .+.++.
T Consensus        66 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~l~  144 (300)
T 2zyq_A           66 WECANAEGLQEIRNRLDLEGTPYKEATAAELADRRVD-EMIRFADPSGNCLEVFHGTALEHRRVVSPYGHRFVTGEQGMG  144 (300)
T ss_dssp             EECSSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCS-EEEEEECTTCCEEEEEECCCCCCSCCCCTTCCCBCCGGGCSC
T ss_pred             EEeCCHHHHHHHHHHHHHcCCeEEeCChhhcccccce-EEEEEECCCCCEEEEEEcCCcCCCCCccCCCcccccCCCccC
Confidence            99965   8899999999999987665432   2333 358899999999999987 21               124689


Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccC--------Cc-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEE
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV  226 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~  226 (291)
                      |+.|.|+|++++.+||+++|||++.......        ++ .....++..+..  ...+.+...      +..++..|+
T Consensus       145 hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~g~~h~  216 (300)
T 2zyq_A          145 HVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPR--HHSLAFLPM------PTSSGIVHL  216 (300)
T ss_dssp             EEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSB--SCSEEEESS------CCSSSEEEE
T ss_pred             eEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCC--ccEEEEecC------CCCCCceEE
Confidence            9999999999999999999999986543221        11 123334443221  233444321      123578999


Q ss_pred             EEEecchhhh---HHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          227 AISTDDVYKS---AEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v~di~~~---~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +|.|+|+++.   +++|    +++|+++..+|.+++.++++++|++||+||+|||++...
T Consensus       217 af~v~d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          217 MVEVEQADDVGLCLDRA----LRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             EEEBSSHHHHHHHHHHH----HHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCC
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCe
Confidence            9999996654   6666    999999988887766544688999999999999997543

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=100.00  E-value=1.3e-31  Score=226.43  Aligned_cols=236  Identities=13%  Similarity=0.121  Sum_probs=168.4

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+..  +    ..++..++....+.  +...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~--~----~~~l~~~~~~~~l~--~~~~-------~~~~~~~~~f~v   66 (292)
T 1kw3_B            2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG--D----AALYRADQRAWRIA--VQPG-------ELDDLAYAGLEV   66 (292)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCSEE--EEEC-------TTCEEEEEEEEC
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHhcCCCEEeecCC--C----eEEEEcCCceEEEE--EccC-------CCCCccEEEEEE
Confidence            7899999999999999999999999999987642  1    24455543322222  2211       123688999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcc---cCCCceEEEEEECCCCCEEEEEeCCCC------------------CCCcee
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGP---LKGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~---~~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+++...+..   ..++. ..++|+||+|+.+||++....                  ..++.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (292)
T 1kw3_B           67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVM-GLLCLQDPFGLPLEIYYGPAEIFHEPFLPSAPVSGFVTGDQGIGH  145 (292)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCS-EEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCCCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHcCCeEeecCcccccccCce-EEEEEECCCCCEEEEEECccccccCCCCCCCCccccccCCcccce
Confidence            8   8999999999999998776643   12333 358899999999999986521                  135899


Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccC--Cc-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      +.|.|+|++++.+||+++|||++.......  ++ .....++..+..  ...+.+...      +..++.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~d~  217 (292)
T 1kw3_B          146 FVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAAF------PIPKRIHHFMLQANTI  217 (292)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------SCSSSEEEEEEEBSSH
T ss_pred             EEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCC--cceEEEecC------CCCCceEEEEEEcCCH
Confidence            999999999999999999999987543221  11 123334443222  223444321      1135789999999987


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCC-eEEEEech
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~-~iel~~~~  282 (291)
                      +++.+.+ ++|+ +|+++..+|.+++.+..+++||+||+|| +|||+...
T Consensus       218 ~~v~~~~-~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          218 DDVGYAF-DRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HHHHHHH-HHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHHHH-HHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            6644432 3338 9999988887776544577899999999 99999864

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=100.00  E-value=2.7e-31  Score=224.98  Aligned_cols=236  Identities=15%  Similarity=0.160  Sum_probs=171.9

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++|+||.|.|+|++++.+||+++|||++..+..  +    ..++..+.....+.+  ...       ...++.|++|.|
T Consensus         2 i~~i~hv~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~----~~~~~~~~~~~~l~~--~~~-------~~~~~~~~~f~v   66 (297)
T 1lgt_A            2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD--N----GDLFRIDSRAWRIAV--QQG-------EVDDLAFAGYEV   66 (297)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEE
T ss_pred             ceEEEEEEEEcCCHHHHHHHHHHccCCEEeecCC--C----eEEEEeCCCcEEEEE--ecC-------CCCCccEEEEEe
Confidence            7899999999999999999999999999987642  1    245555433222322  221       134788999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCccc---CCCceEEEEEECCCCCEEEEEeCCCC------------------CCCcee
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDGYIFELIQRGPT------------------PEPLCQ  156 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dp~G~~iel~~~~~~------------------~~~~~h  156 (291)
                      +   |+++++++|+++|+++...+...   .++. ..++|+||+|+.+||++....                  +..+.|
T Consensus        67 ~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h  145 (297)
T 1lgt_A           67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVT-GLITFADPFGLPLEIYYGASEVFEKPFLPGAAVSGFLTGEQGLGH  145 (297)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCS-EEEEEECTTSCEEEEEECCCBCTTSCCCCSSSCSCBCCGGGCSCE
T ss_pred             CCHHHHHHHHHHHHHCCCeEEeCCccccccCCce-eEEEEECCCCCEEEEEECccccccCCccCCCcccccccCccccce
Confidence            8   99999999999999987655431   2333 358999999999999986521                  146899


Q ss_pred             EEeeeCCccccHHHHHhhhCCeeeeeeccC---CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       157 v~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      +.|.|+|++++.+||+++|||++.......   +......++..+..  ...+.+...      +..++.+|++|.|+|+
T Consensus       146 v~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~l~~~------~~~~~~~hiaf~v~d~  217 (297)
T 1lgt_A          146 FVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNER--HHTLAIAAF------PLPKRIHHFMLEVASL  217 (297)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEECC------CCSSSEEEEEEEBSCH
T ss_pred             EEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCC--cceEEEEcC------CCCCCceEEEEeCCCH
Confidence            999999999999999999999986542211   11123344433221  233444321      1235789999999998


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +++.+.. ++ +++|+++..+|.+++.+..+++||+||+||+|||++..
T Consensus       218 ~~~~~~~-~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          218 DDVGFAF-DR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             HHHHHHH-HH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHHHH-HH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            7776554 55 78999998888877654456799999999999999865

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=100.00  E-value=1.6e-31  Score=227.31  Aligned_cols=237  Identities=13%  Similarity=0.162  Sum_probs=167.7

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.+++++|+.|.|+|++++.+||+++|||++.....  ++   ..++..++....  +.+...       ...++.|++|
T Consensus         2 m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~~~~--l~l~~~-------~~~~~~~~~f   67 (305)
T 2wl9_A            2 AKVTELGYLGLSVSNLDAWRDYAAGIMGMQVVDDGE--DD---RIYLRMDRWHHR--IVLHAD-------GSDDLAYIGW   67 (305)
T ss_dssp             CCCCEEEEEEEECSCHHHHHHHHTTTTCCEEECCSC--TT---EEEEECSSBSCS--EEEECS-------SCCEEEEEEE
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHhccCCEEeeccC--CC---eEEEEeCCCeEE--EEEEEC-------CCCCeEEEEE
Confidence            458999999999999999999999999999876211  11   345555442222  333321       1347899999


Q ss_pred             EeC---CHHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEeC-CC------------------CCCCc
Q 022871           99 ATE---DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQR-GP------------------TPEPL  154 (291)
Q Consensus        99 ~v~---d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~-~~------------------~~~~~  154 (291)
                      .|+   |+++++++|+++|+++...|...  ..+....++|+||+|+.+||++. ..                  ...++
T Consensus        68 ~v~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  147 (305)
T 2wl9_A           68 RVAGPVELDELAEQLKNAGIPFEVASDADAAERRVLGLVKLHDPGGNPTEIFYGPQVDTSSPFHPGRPMFGKFVTEGQGL  147 (305)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEEECBCTTSCCCCSSCCSSCBCCTTTCS
T ss_pred             EECCHHHHHHHHHHHHHCCCceEeCCcccccccCcEEEEEEECCCCCEEEEEECCCccCCCCcCCCCCcccceecCCcee
Confidence            996   69999999999999987666542  12334458899999999999976 21                  12478


Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccC--Cc-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .|+.|.|+|++++.+|| ++|||++.......  ++ .....++..+..  ...+.+...      +..++..|++|.|+
T Consensus       148 ~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~hiaf~v~  218 (305)
T 2wl9_A          148 GHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDR--HHSLAFGVG------PMDKRINHLMIEYT  218 (305)
T ss_dssp             CEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSS--SCSEEECCS------CCSSSEEEEEEEES
T ss_pred             eeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCC--ceEEEEecC------CCCCCceEEEEEcC
Confidence            99999999999999999 99999976432211  11 122333433222  223333221      12357899999999


Q ss_pred             chh---hhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 DVY---KSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~---~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      |++   ++++++    +++|+++..+|.+++.++.+++||+||+||+|||+...
T Consensus       219 d~~~v~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          219 HLDDLGYAHDLV----RQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             SHHHHHHHHHHH----HHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CHHHHHHHHHHH----HHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            844   445555    99999998888776654457899999999999999854

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=100.00  E-value=1.4e-31  Score=227.36  Aligned_cols=241  Identities=13%  Similarity=0.083  Sum_probs=167.7

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      +|.+++++|+.|.|+|++++.+||+++|||++..+..  .+   ..++..+.....+  .+...       ...++.|++
T Consensus         4 ~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~---~~~~~~~~~~~~l--~l~~~-------~~~~~~~~~   69 (302)
T 2ehz_A            4 QAAVIELGYMGISVKDPDAWKSFATDMLGLQVLDEGE--KD---RFYLRMDYWHHRI--VVHHN-------GQDDLEYLG   69 (302)
T ss_dssp             CCCEEEEEEEEEECSCHHHHHHHHHHTTCCEEECCSC--SS---EEEEESSSBSCSE--EEESS-------CCSEEEEEE
T ss_pred             cccccEeeEEEEEeCCHHHHHHHHHhcCCCEEEeccC--Cc---ceEEEeCCCceEE--EEecC-------CCCCeeEEE
Confidence            3679999999999999999999999999999876531  11   2445443222222  23221       123688999


Q ss_pred             EEeC---CHHHHHHHHHHcCCeEecCCcccC--CCceEEEEEECCCCCEEEEEeCCC----C---------------CCC
Q 022871           98 IATE---DVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGP----T---------------PEP  153 (291)
Q Consensus        98 ~~v~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~~----~---------------~~~  153 (291)
                      |.|.   |+++++++|+++|+++...+...+  .+....++|+||+|+.|||++...    .               +.+
T Consensus        70 ~~v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (302)
T 2ehz_A           70 WRVAGKPEFEALGQKLIDAGYKIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGPRIDMSNPFHPGRPLHGKFVTGDQG  149 (302)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEECBCTTSCCCCSSCCSSCBCCGGGC
T ss_pred             EEECCHHHHHHHHHHHHHCCCcEEECCccccccccceEEEEEECCCCCEEEEEECCCccCCCCccCCCCcccceecCCCc
Confidence            9995   689999999999999876655432  123345889999999999997521    0               127


Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccC--Cc-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      +.|+.|.|+|++++.+|| ++|||++......+  ++ .....++..+..  ...+.+..  .    +..++.+|++|.|
T Consensus       150 l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~--~----~~~~~~~hiaf~v  220 (302)
T 2ehz_A          150 LGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNAR--DHSIAFGA--M----PAAKRLNHLMLEY  220 (302)
T ss_dssp             SCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSB--SCSEEECS--C----CCSSSEEEEEEEE
T ss_pred             cceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCC--CcEEEEec--C----CCCCceeEEEEEc
Confidence            899999999999999999 99999976432211  11 123334443221  22333322  1    1235789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +|++++.+. .++|+++|+++..+|.+++.++.+++||+||+||+|||+...
T Consensus       221 ~d~~~v~~~-~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          221 THMEDLGYT-HQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             SSHHHHHHH-HHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             CCHHHHHHH-HHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            987654332 233399999998888776654457899999999999998753

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.97  E-value=2.5e-29  Score=218.18  Aligned_cols=252  Identities=19%  Similarity=0.235  Sum_probs=177.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc------ccCCCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS------YDIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g   92 (291)
                      |.+++++||.+.|+|++++.+||++.|||++..+....++  ..+.+..+  ...+.  +..+.....      ...+.+
T Consensus         1 ~~i~~l~hv~~~v~D~~~a~~fy~~~LGf~~~~~~~~~~g--~~~~~~~g--~~~l~--l~~~~~~~~~~~~~~~~~g~g   74 (357)
T 2r5v_A            1 MQNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADH--RSIALRQG--QVTLV--LTEPTSDRHPAAAYLQTHGDG   74 (357)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTE--EEEEEEET--TEEEE--EEEESSTTSHHHHHHHHHSSE
T ss_pred             CCCceEEEEEEEECCHHHHHHHHHHcCCCeEEEEEcCCCc--eEEEEEeC--CEEEE--EeCCCCCCCHHHHHHHhcCCe
Confidence            4589999999999999999999999999999877543333  23334433  23333  332111111      113568


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC-----------------------
Q 022871           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP-----------------------  149 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~-----------------------  149 (291)
                      +.|++|.|+|+++++++++++|+++...|.+..+|....+.+++|+|..++|++...                       
T Consensus        75 ~~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~~~~~~f~p~~~~~~~~~~~~~~~~  154 (357)
T 2r5v_A           75 VADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDV  154 (357)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECCSSSCCCCTTCEECSCCCCTTCTTC
T ss_pred             EEEEEEEECCHHHHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecccCCCCCCCCCcccCcccccCCCCC
Confidence            999999999999999999999999887665433344445789999999999998531                       


Q ss_pred             CCCCceeEEeeeC--CccccHHHHHhhhCCeeeeeec--cCCcceeEEEecccCCCceeEEEeeeecCc--ce-------
Q 022871          150 TPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVD--KPEYKYTLAMLGYAEEDQTTVLELTYNYGV--TE-------  216 (291)
Q Consensus       150 ~~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------  216 (291)
                      ...+++|++|.|+  |++++.+||+++|||++.....  .........++..+.  ....|++......  ..       
T Consensus       155 ~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~--g~~~l~l~~~~~~~~~~~~~~~~~  232 (357)
T 2r5v_A          155 DLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSAS--GAVTLTLIEPDRNADPGQIDEFLK  232 (357)
T ss_dssp             CCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTT--SCCEEEEEEECTTSBCCHHHHHHH
T ss_pred             CcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCC--CCEEEEEeeecCCCCCchhHHHHH
Confidence            0134899999999  9999999999999999875431  122222344444322  2456666554321  11       


Q ss_pred             eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCccc---CC-----CC--------ceEEEEECCCCCeEEEEe
Q 022871          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI---PG-----LN--------TKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       217 ~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~---~~-----~~--------~~~~~~~Dp~G~~iel~~  280 (291)
                      ...+++++|++|.|+|+++++++|    +++|++++..|...   .+     .+        .+++|++||+|++|||++
T Consensus       233 ~~~~~g~~Hiaf~v~Di~~~~~~L----~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t  308 (357)
T 2r5v_A          233 DHQGAGVQHIAFNSNDAVRAVKAL----SERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFT  308 (357)
T ss_dssp             HHTSSEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEB
T ss_pred             hcCCCCccEEEEEcCCHHHHHHHH----HHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEc
Confidence            113568999999999999999999    99999988876321   00     00        137999999999999998


Q ss_pred             ch
Q 022871          281 NE  282 (291)
Q Consensus       281 ~~  282 (291)
                      ..
T Consensus       309 ~~  310 (357)
T 2r5v_A          309 AS  310 (357)
T ss_dssp             CC
T ss_pred             cC
Confidence            43

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.97  E-value=7.8e-28  Score=210.08  Aligned_cols=256  Identities=17%  Similarity=0.230  Sum_probs=177.2

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC--ceeeEEEecCCCCceeEEEeeccCCCCc--------
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVTS--------   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   86 (291)
                      .++.+++++||.|.|+|++++++||+++|||++..+.....+  ......+..+  ...  +.+..+..+..        
T Consensus        16 ~~~~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g--~~~--l~l~~~~~~~~~~~~~~~~   91 (381)
T 1t47_A           16 DPFPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG--SAR--FVLTSVIKPATPWGHFLAD   91 (381)
T ss_dssp             CCSCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET--TEE--EEEEEESSCCSHHHHHHHH
T ss_pred             CCCcCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC--CEE--EEEecCCCCCCcchhHHHH
Confidence            457799999999999999999999999999999886432212  2234445543  222  33333211111        


Q ss_pred             c--cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEeCCC-------------
Q 022871           87 Y--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRGP-------------  149 (291)
Q Consensus        87 ~--~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~~-------------  149 (291)
                      +  ..+.++.|++|.|+|+++++++|+++|+++..+|...  ..|...++.+++|+|+.++|++...             
T Consensus        92 ~~~~~g~gv~~iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~~~~~f~p~~~~~~  171 (381)
T 1t47_A           92 HVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDGPYLPGYVAAA  171 (381)
T ss_dssp             HHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECSSSSTTCEECC
T ss_pred             HHHhcCCceEEEEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCCCCCCCCCCCcccc
Confidence            1  1367999999999999999999999999988776542  2233346789999999999997520             


Q ss_pred             ---------CCCCceeEEeeeC--CccccHHHHHhhhCCeeeeeec-----cCCcceeEEEecccCCCceeEEEeeeec-
Q 022871          150 ---------TPEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVD-----KPEYKYTLAMLGYAEEDQTTVLELTYNY-  212 (291)
Q Consensus       150 ---------~~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~-  212 (291)
                               ....++|+++.|+  |++++.+||+++|||++.....     .+.......++..+.  ....+++..+. 
T Consensus       172 ~~~~~~~~~~~~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~--g~v~i~l~~~~~  249 (381)
T 1t47_A          172 PIVEPPAHRTFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGT--LKVKFPINEPAL  249 (381)
T ss_dssp             CSSCCCSSCSCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTT--SCSEEEEEEECC
T ss_pred             ccccCCCCCCceEEeEEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCC--CcEEEEEecCCc
Confidence                     0135899999999  9999999999999999876532     122223444443222  23456665543 


Q ss_pred             -Ccce-------eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCC--------CC--------ceEEEE
Q 022871          213 -GVTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPG--------LN--------TKITSF  268 (291)
Q Consensus       213 -~~~~-------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~--------~~--------~~~~~~  268 (291)
                       ....       ...++|++|++|.|+|+.+++++|    +++|+++...|..--.        .+        ..++|-
T Consensus       250 ~~~~s~~~~~l~~~~g~Gv~HiAf~vdDi~~~~~~L----~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d  325 (381)
T 1t47_A          250 AKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILAD  325 (381)
T ss_dssp             SSSCCHHHHHHHHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEE
T ss_pred             CCCccHHHHHHHHhCCCCcceEEEecCCHHHHHHHH----HHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEe
Confidence             1111       124678999999999999999999    9999998877643100        00        124677


Q ss_pred             ECCCCCeEEEEech
Q 022871          269 VDPDGWKTVLVDNE  282 (291)
Q Consensus       269 ~Dp~G~~iel~~~~  282 (291)
                      +||+|.++.|+...
T Consensus       326 ~d~~g~llqift~~  339 (381)
T 1t47_A          326 RDEDGYLLQIFTKP  339 (381)
T ss_dssp             ECSSCEEEEEEBCC
T ss_pred             eCCCCeEEEEeccC
Confidence            88888888877543

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.94  E-value=5.6e-26  Score=196.86  Aligned_cols=228  Identities=18%  Similarity=0.287  Sum_probs=165.9

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCc--eeeEEEecCCCCceeEEEeeccCCC-----Ccc--c
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEK--YSNAFLGFGPEQSHFVVELTYNYGV-----TSY--D   88 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~   88 (291)
                      ...+++++||.|.|+|.+++.+||++.|||++......+.+.  ...+.+..|  ...+  .+..+..+     ..+  .
T Consensus         6 ~~~i~~i~Hv~i~V~d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G--~i~~--~L~~p~~p~s~~~a~fl~~   81 (393)
T 3isq_A            6 RGRFLHFHSVTFWVGNAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQG--KIVF--VLSSALNPWNKEMGDHLVK   81 (393)
T ss_dssp             SCEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEET--TEEE--EEEEESSTTCHHHHHHHHH
T ss_pred             CCCCceEeEEEEEECCHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecC--CEEE--EEecCCCCCchHHHHHHHh
Confidence            346899999999999999999999999999998875543232  223344444  3333  33322111     111  2


Q ss_pred             CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEeCCC-----------C-----
Q 022871           89 IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGP-----------T-----  150 (291)
Q Consensus        89 ~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~-----------~-----  150 (291)
                      .|+|++|+||.|+|+++++++++++|+++..+|....+  |...++.+++|.|..+.|++...           .     
T Consensus        82 hG~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr~~y~~~flpg~~~~~~~~~  161 (393)
T 3isq_A           82 HGDGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEKMNYIGQFLPGYEAPAFMDP  161 (393)
T ss_dssp             HCSEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSSSCTTCBSCSCCCT
T ss_pred             cCCcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEeccccCcCCCCCCccccccccc
Confidence            46799999999999999999999999999888765533  44456778999999999998421           0     


Q ss_pred             -----C----CCceeEEeeeCC--ccccHHHHHhhhCCeeeeeec-----cCCcceeEEEecccCCCceeEEEeeeecC-
Q 022871          151 -----P----EPLCQVMLRVGD--LGRSIKFYEKALGMKLLRTVD-----KPEYKYTLAMLGYAEEDQTTVLELTYNYG-  213 (291)
Q Consensus       151 -----~----~~~~hv~l~v~D--~~~~~~Fy~~~lG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-  213 (291)
                           +    .+++|+++.|.|  ++++.+||+++|||++....+     .+........+..+  +....|+|..+.+ 
T Consensus       162 ~~~~~~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~--~g~v~i~L~ep~~~  239 (393)
T 3isq_A          162 LLPKLPKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANY--EESIKMPINEPAPG  239 (393)
T ss_dssp             TGGGSCCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECT--TSSCEEEEEEEECC
T ss_pred             cccCCCCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECC--CCCEEEEEecCCCC
Confidence                 0    248999999998  999999999999999876532     12223344444422  2356777776543 


Q ss_pred             -cce-------eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCC
Q 022871          214 -VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       214 -~~~-------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                       ..+       ...|.|++|+||.|+||.+++++|    +++|++++..|
T Consensus       240 ~~~s~I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l----~~~Gv~~l~~P  285 (393)
T 3isq_A          240 KKKSQIQEYVDYNGGAGVQHIALKTEDIITAIRHL----RERGLEFLSVP  285 (393)
T ss_dssp             SBCCHHHHHHHHHTSSEEEEEEEEESCHHHHHHHH----HHTTCCBCCCC
T ss_pred             CCCCHHHHHHHHcCCCCcceEEEEcCCHHHHHHHH----HHcCCccCCCC
Confidence             111       124789999999999999999999    99999998876

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.94  E-value=2.3e-25  Score=195.99  Aligned_cols=233  Identities=18%  Similarity=0.242  Sum_probs=157.9

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC--ceeeEEEecCCCCceeEEEeeccCCC-----------
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGV-----------   84 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   84 (291)
                      .+.+++++||.|.|+|++++++||++.|||+++.+.+.+.+  .+..++++.+  ...+.+.-......           
T Consensus        20 ~~~i~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g--~~~l~L~~~~~~~~~~~~~~~~~~~   97 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTA   97 (424)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCC
T ss_pred             cccCCeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC--CEEEEEecCCCCccccccccccccc
Confidence            35689999999999999999999999999999877543322  2334445433  33333322210100           


Q ss_pred             --C----c------ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC--
Q 022871           85 --T----S------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT--  150 (291)
Q Consensus        85 --~----~------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~--  150 (291)
                        .    .      ...+.|+.|+||.|+|+++++++++++|+++..+|....+ ......+++|+|..++|++....  
T Consensus        98 p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~~~  176 (424)
T 1sqd_A           98 SIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDT  176 (424)
T ss_dssp             SSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC--
T ss_pred             ccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCCCC
Confidence              0    0      0234689999999999999999999999998877765533 23346667777777777754211  


Q ss_pred             -----------------------CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc-----ceeEEEecccCCCc
Q 022871          151 -----------------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQ  202 (291)
Q Consensus       151 -----------------------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~  202 (291)
                                             ..+++|+++.|+|++++.+||+++|||++.+.....+.     +....++..+.  .
T Consensus       177 ~~~~f~p~~~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~~LGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g  254 (424)
T 1sqd_A          177 EKSEFLPGFERVEDASSFPLDYGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASND--E  254 (424)
T ss_dssp             ----CCTTCEECCTTTCCCCCSSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTT--S
T ss_pred             CccccCCCcccccccccCCCcCCcceEeeEEEeeCCHHHHHHHHHHhhCCeEEEEEcccccccccccceEEEEEcCC--C
Confidence                                   12489999999999999999999999998876533221     22333343222  2


Q ss_pred             eeEEEeeeecC---cc-e------eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCC
Q 022871          203 TTVLELTYNYG---VT-E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       203 ~~~l~l~~~~~---~~-~------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ...|++..+..   .. .      ...|+|++||||.|+||.+++++|.+++..+|++++..|
T Consensus       255 ~~~l~l~e~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~p  317 (424)
T 1sqd_A          255 MVLLPINEPVHGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSP  317 (424)
T ss_dssp             CSEEEEEEECCC---CCHHHHHHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCC
T ss_pred             cEEEEEecccccCCCcchhhhhhhhcCCCCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCC
Confidence            45666665431   11 1      135779999999999999999999222222899998775

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=6e-25  Score=193.07  Aligned_cols=226  Identities=15%  Similarity=0.183  Sum_probs=158.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC--ceeeEEEecCCCCceeEEEeeccCCCC-----------
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE--KYSNAFLGFGPEQSHFVVELTYNYGVT-----------   85 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------   85 (291)
                      +.+++++||.|.|+|++++.+||++.|||++..+...+.+  ....+++..++  ..+.+  ..+....           
T Consensus        27 ~~i~~l~hV~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~--~~l~L--~~~~~~~~~~~~~p~~~~  102 (418)
T 1sp8_A           27 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGS--LSFLF--TAPYAHGADAATAALPSF  102 (418)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETT--EEEEE--EEECCSSCCGGGCSSTTC
T ss_pred             ccCceEEEEEEEeCCHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCC--EEEEE--ecCCCCcccccccccccc
Confidence            4589999999999999999999999999999877543322  34455555443  33333  2221110           


Q ss_pred             --c----c--cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC-------
Q 022871           86 --S----Y--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT-------  150 (291)
Q Consensus        86 --~----~--~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~-------  150 (291)
                        .    +  ..+.|++||+|.|+|+++++++++++|+++...|....+ ...+..+++|+|..++|++....       
T Consensus       103 ~~~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~-~~~~~~i~~~Gg~~~~lvd~~~~~~~~~f~  181 (418)
T 1sp8_A          103 SAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAGEPFL  181 (418)
T ss_dssp             CHHHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGGSSSS
T ss_pred             cchhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccC-ceEEEEEecCCCEEEEEEccCCCCCCcccC
Confidence              0    1  135789999999999999999999999998877654322 23345566777777777665310       


Q ss_pred             ---------------CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc-----ceeEEEecccCCCceeEEEeee
Q 022871          151 ---------------PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-----KYTLAMLGYAEEDQTTVLELTY  210 (291)
Q Consensus       151 ---------------~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~l~~  210 (291)
                                     ..+++|+++.|+|++++.+||+++|||++.+.....+.     +....++..+.  ....|++..
T Consensus       182 p~~~~~~~~~~~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~--g~i~l~l~e  259 (418)
T 1sp8_A          182 PGFEGVASPGAADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNE  259 (418)
T ss_dssp             TTCEECCCTTCCCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEE
T ss_pred             CCCcccCCCCCCCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCC--CcEEEEEee
Confidence                           12479999999999999999999999998876533221     22333444322  245666655


Q ss_pred             ecC---cce-------eccCcceeEEEEEecchhhhHHHHHHHHHH----hCCeeecCC
Q 022871          211 NYG---VTE-------YTKGNAYAQVAISTDDVYKSAEVVNLVTQE----LGGKITRQP  255 (291)
Q Consensus       211 ~~~---~~~-------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~----~G~~~~~~p  255 (291)
                      +..   ..+       ...|+|++||||.|+||.+++++|    ++    +|+++...|
T Consensus       260 ~~~~~~~~s~i~~fl~~~~G~G~~HIAf~vdDI~~a~~~L----~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          260 PVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREM----QARSAMGGFEFMAPP  314 (418)
T ss_dssp             ECCCSSSCCHHHHHHHHHTSSEEEEEEEEETTHHHHHHHH----HTSGGGTSCCBCCCC
T ss_pred             cccccCCCcchhhhhhccCCCCcCEEEEEeCCHHHHHHHH----hhhhccCCeEEccCC
Confidence            431   111       135779999999999999999999    88    799998876

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.93  E-value=8.7e-25  Score=189.42  Aligned_cols=247  Identities=13%  Similarity=0.116  Sum_probs=166.9

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC--Ccc--cCCCC
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSY--DIGTG   92 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~g   92 (291)
                      ++|.+.+++||.+.|+|++++.+|| +.|||+++.+....    ..+++..+  ...+++  ......  ..+  ..+++
T Consensus         6 ~~~~i~~l~hV~~~V~D~~~~~~fy-~~LGf~~~~~~~~~----~~~l~~~g--~~~l~l--~~~~~~~~~~~~~~~g~g   76 (357)
T 1cjx_A            6 NPMGLMGFEFIEFASPTPGTLEPIF-EIMGFTKVATHRSK----NVHLYRQG--EINLIL--NNEPNSIASYFAAEHGPS   76 (357)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHH-HHTTCEEEEEESSS----SEEEEEET--TEEEEE--ECCSSSHHHHHHHHHSSE
T ss_pred             CCcccceEEEEEEEeCCHHHHHHHH-HHCCCEEEEEeCCe----eEEEEecC--CEEEEE--ECCCCchhhhhhhhcCCe
Confidence            3567999999999999999999999 78999998764321    13334433  233333  221111  011  24578


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC----------------------
Q 022871           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT----------------------  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~----------------------  150 (291)
                      +.+++|.|+|+++++++++++|+++...+..  .|....+.+++|+|..++|++....                      
T Consensus        77 v~~iaf~V~D~~~~~~~l~~~G~~~~~~~~~--~g~~~~~~~~~~gg~~~~~vd~~~~~~~~~~~~f~~~~~~~~~~~~~  154 (357)
T 1cjx_A           77 VCGMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGSSIYDIDFVYLEGVERNPVGA  154 (357)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSCCHHHHHEEECTTCCSSCCTT
T ss_pred             EEEEEEEeCCHHHHHHHHHHcCCEEeecCCC--CCcEEEEeeeCCCCeEEEEECCCCCCCCcCCCCcccCCccccCCCCC
Confidence            9999999999999999999999998766532  1232335678888888888765411                      


Q ss_pred             -CCCceeEEeeeC--CccccHHHHHhhhCCeeeeeeccCC--cce--eEEEecccCCCceeEEEeeee-cCcce------
Q 022871          151 -PEPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPE--YKY--TLAMLGYAEEDQTTVLELTYN-YGVTE------  216 (291)
Q Consensus       151 -~~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~l~l~~~-~~~~~------  216 (291)
                       ..+++|+++.|+  |++++.+||+++|||++.......+  ...  .+.+..  .  ....++|..+ .....      
T Consensus       155 ~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~--~--g~~~i~L~~~~~~~~~~~~~~~  230 (357)
T 1cjx_A          155 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAP--D--GMIRIPLNEESSKGAGQIEEFL  230 (357)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECT--T--SSCEEEEEEECTTCCSHHHHHH
T ss_pred             CeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECC--C--CCEEEEEeeecCCCCChHHHhH
Confidence             124789999999  9999999999999999876543221  111  223332  1  2356777654 22111      


Q ss_pred             -eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeec-CCc--------ccCCCCc--------eEEEEEC----CCCC
Q 022871          217 -YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR-QPG--------SIPGLNT--------KITSFVD----PDGW  274 (291)
Q Consensus       217 -~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~-~p~--------~~~~~~~--------~~~~~~D----p~G~  274 (291)
                       ...+++++|++|.|+|+++++++|    +++|+++.. .|.        +....+.        .++|-+|    |+|+
T Consensus       231 ~~~~g~g~~HiAf~v~Di~~~~~~L----~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~  306 (357)
T 1cjx_A          231 MQFNGEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRL  306 (357)
T ss_dssp             HHHTSSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEE
T ss_pred             HhcCCCCeeEEEEEcCCHHHHHHHH----HHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCe
Confidence             124568999999999999999999    999999877 551        1111011        1366677    7788


Q ss_pred             eEEEEech
Q 022871          275 KTVLVDNE  282 (291)
Q Consensus       275 ~iel~~~~  282 (291)
                      +++|+...
T Consensus       307 llqift~~  314 (357)
T 1cjx_A          307 LLQIFSET  314 (357)
T ss_dssp             EEEEEBCC
T ss_pred             EEEEeccC
Confidence            88887643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.86  E-value=3.4e-20  Score=137.83  Aligned_cols=128  Identities=57%  Similarity=1.019  Sum_probs=97.6

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++++|+.|.|+|++++.+||+++|||++..+...+++.+..+++..++......+.+...........+.++.|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            47899999999999999999999999998776555555666777765422223344443322222334568899999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |+++++++|+++|+++..+|...++|...+++|+||+|+.|||++...
T Consensus        81 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  128 (135)
T 1f9z_A           81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKD  128 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC--
T ss_pred             CHHHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCC
Confidence            999999999999999988777776665455889999999999999764

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.85  E-value=4.2e-20  Score=136.89  Aligned_cols=123  Identities=25%  Similarity=0.324  Sum_probs=93.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeec-------cCC--C-Cccc
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY-------NYG--V-TSYD   88 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--~-~~~~   88 (291)
                      |++++|+|+.|.|+|++++.+||+++|||++..+...++.....+++..++.    .+.+..       ...  . ....
T Consensus         1 M~i~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~~~~~   76 (134)
T 3l7t_A            1 MKLKAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDI----ELEIFGNKLTDSNYCAPPERISWP   76 (134)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTE----EEEEEECCTTSTTCCCCCCCCCSS
T ss_pred             CceeeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCe----EEEEEecccccccccCCccccCCC
Confidence            5689999999999999999999999999999887665555444566665543    233332       111  1 1112


Q ss_pred             -CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           89 -IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        89 -~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                       .+.|+.|++|.|+|+++++++|+++|+++...+....+|.. .++|+||+|+.|||+|
T Consensus        77 ~~~~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           77 REACGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKK-MAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SCCSEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCE-EEEEECTTCCEEEEEC
T ss_pred             CCCCCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceE-EEEEECCCCCEEEEeC
Confidence             45688999999999999999999999998876665555544 5899999999999985

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.85  E-value=3.5e-20  Score=137.79  Aligned_cols=129  Identities=49%  Similarity=0.856  Sum_probs=97.3

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++|||++......+++.+.+.++..+.......+++....+......+.+..|++|.|+
T Consensus         1 m~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~   80 (135)
T 1f9z_A            1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEeCCHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeC
Confidence            46899999999999999999999999987655444444556666544322245677765443322234557889999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      |++++++++    +++|+++..+|...+++..+.+|++||+|+.|||++..+.
T Consensus        81 d~~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~  129 (135)
T 1f9z_A           81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  129 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC---
T ss_pred             CHHHHHHHH----HHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCC
Confidence            999999999    9999999888877665434689999999999999997653

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.84  E-value=1.4e-20  Score=143.68  Aligned_cols=125  Identities=19%  Similarity=0.183  Sum_probs=90.0

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC--Ccc---cCCCCee
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSY---DIGTGFG   94 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~g~~   94 (291)
                      ..++|+|+.|.|+|+++|++||+++|||++..+...++.  ....+..........+........  .+.   ..+.|..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            456899999999999999999999999998776554332  233333322222222222221111  111   1234788


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |++|.|+|+++++++|+++|+++..+|.+.++|  +.++|+|||||+|||+|..
T Consensus       101 ~l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g--~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          101 AASFAVDDIAAEYERLSALGVRFTQEPTDMGPV--VTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             SEEEEESCHHHHHHHHHHTTCCEEEEEEECSSC--EEEEEECSSSCEEEEEEC-
T ss_pred             EEEeeechhhhhhhHHhcCCcEEeeCCEEcCCe--EEEEEECCCCCEEEEEEEC
Confidence            999999999999999999999998888888775  3588999999999999865

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.83  E-value=2.6e-20  Score=142.20  Aligned_cols=125  Identities=17%  Similarity=0.143  Sum_probs=91.0

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-----eccCccee
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----YTKGNAYA  224 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~~~~~~~~  224 (291)
                      ..++|.|+.|.|+|+++|++||+++|||++.......+.  ++..+..........+.+.....+..     ...+.+..
T Consensus        23 ~~Mri~~v~I~V~Dle~A~~FY~dvLGf~v~~d~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~  100 (155)
T 4g6x_A           23 NAMRIHLTNVFVDDQAKAESFYTGKLGFLVKADVPVGAD--RWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIP  100 (155)
T ss_dssp             CCCCCCEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCC
T ss_pred             CceEEEEEEEEeCCHHHHHHHHHHHhCCEEEEeecCCCc--eEEEEeccCCCcceEEEeccCCCccccccccccccCCce
Confidence            567899999999999999999999999998765544333  33333322222222332222211111     11234778


Q ss_pred             EEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       225 h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      |++|.|+|++++++++    +++|+++..+|...++  ++.+||+|||||+|||+|-.
T Consensus       101 ~l~f~VdDvda~~~~l----~~~Gv~~~~~p~~~~~--g~~~~f~DPdGn~iel~q~~  152 (155)
T 4g6x_A          101 AASFAVDDIAAEYERL----SALGVRFTQEPTDMGP--VVTAILDDTCGNLIQLMQIA  152 (155)
T ss_dssp             SEEEEESCHHHHHHHH----HHTTCCEEEEEEECSS--CEEEEEECSSSCEEEEEEC-
T ss_pred             EEEeeechhhhhhhHH----hcCCcEEeeCCEEcCC--eEEEEEECCCCCEEEEEEEC
Confidence            9999999999999999    9999999999988776  48999999999999999864

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.83  E-value=2e-19  Score=135.48  Aligned_cols=126  Identities=55%  Similarity=0.914  Sum_probs=92.3

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .|.+++++|+.|.|+|++++.+||+++|||++..+...+++.+...++..++......+.+...........+.++.|++
T Consensus         3 ~m~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~   82 (144)
T 2c21_A            3 HMPSRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIA   82 (144)
T ss_dssp             ---CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEE
T ss_pred             CCccceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEE
Confidence            46789999999999999999999999999999876544444455677776543112334444332222233456889999


Q ss_pred             EEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |.|+|+++++++|+++|+++...     +|...+++|+||+|+.|||++..
T Consensus        83 f~v~d~~~~~~~l~~~G~~~~~~-----~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           83 IGVEDVKELVADMRKHDVPIDYE-----DESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EEESCHHHHHHHHHHTTCCEEEE-----CSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EEeCCHHHHHHHHHHCCCEEecc-----CCcEEEEEEECCCCCEEEEEEcC
Confidence            99999999999999999997754     34444358999999999999753

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.83  E-value=3.4e-19  Score=131.96  Aligned_cols=127  Identities=17%  Similarity=0.232  Sum_probs=93.8

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ..+++++++|+.|.|+|++++.+||+++|||++..+...+++ ...+.+..+....  .+.+.............+..|+
T Consensus         7 ~~~m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~--~l~l~~~~~~~~~~~~~~~~~~   83 (133)
T 4hc5_A            7 GSLMIAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPGAQT--QVALGLPSWYEDGRKPGGYTGI   83 (133)
T ss_dssp             -CCSCCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTTCSC--EEEEECGGGCSSCCCSCEEEEE
T ss_pred             ccccccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCCCce--EEEEecCcccccccCCCCeEEE
Confidence            346789999999999999999999999999999876543222 2334444333232  3333332211111223467899


Q ss_pred             EEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           97 AIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        97 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +|.|+|+++++++|+++|+++..+|...++|.. .++|+||+|+.|+|++.
T Consensus        84 ~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           84 SLITRDIDEAYKTLTERGVTFTKPPEMMPWGQR-ATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             EEEESCHHHHHHHHHHTTCEESSSCEECTTSCE-EEEEECTTCEEEEEEEC
T ss_pred             EEEeCCHHHHHHHHHHCCCEeecCCCcCCCCCE-EEEEECCCCCEEEEEeC
Confidence            999999999999999999999888888887664 58999999999999873

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.82  E-value=1.2e-19  Score=134.43  Aligned_cols=123  Identities=24%  Similarity=0.387  Sum_probs=90.5

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC-CCcc------cCCCC
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-VTSY------DIGTG   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~g   92 (291)
                      |+++|+|++|.|+|++++.+||+++|||++..+...++.+...+++..++..  +  .+..... ..+.      ..+.+
T Consensus         2 m~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~--~--~l~~~~~~~~~~~~~~~~~~~~g   77 (134)
T 3rmu_A            2 MLGRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTK--M--ELLHPLGLDSPIAGFLQKNKAGG   77 (134)
T ss_dssp             CEEEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSE--E--EEEEECSTTCTTHHHHHHCTTCE
T ss_pred             ccceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEE--E--EEEecCCCCchhhhhhhccCCCC
Confidence            6899999999999999999999999999988765544445566777765432  2  2222111 1111      23558


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEecCCccc-CCCceEEEEE--ECCCCCEEEEEeC
Q 022871           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGPL-KGGTTHIAFV--KDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~-~~g~~~~~~~--~dp~G~~iel~~~  147 (291)
                      +.|++|.|+|+++++++|+++|+++...+... .+|. ..+++  +||+|+.|||++.
T Consensus        78 ~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~g~-~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           78 MHHICIEVDNINAAVMDLKKKKIRSLSEEVKIGAHGK-PVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCTTBCCCCEECTTSS-EEEEECSCSSCCSCEEEEEC
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCcccCCCCc-eEEEEecCCCCcEEEEEEcC
Confidence            89999999999999999999999977654333 3344 33555  8999999999873

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.82  E-value=2.1e-19  Score=131.83  Aligned_cols=123  Identities=23%  Similarity=0.337  Sum_probs=89.1

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC--CC-CcccCCCCeeE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--GV-TSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~g~~~   95 (291)
                      |++.+++|+.|.|+|++++.+||+++|||++..+...+++.....++..++.    .+.+....  .. .....+.|..|
T Consensus         1 M~~~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~g~~~   76 (126)
T 2p25_A            1 MFFKEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQ----ELEIFISDQFPARPSYPEALGLRH   76 (126)
T ss_dssp             CTTSCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEECTTCCCCCCSSCCSSCCC
T ss_pred             CcccccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCe----EEEEEeccCCCCCCCCCCCccceE
Confidence            5789999999999999999999999999998765432222222344555443    23333211  11 11123457889


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++|.|+|+++++++|+++|+++...+....+|.. .++|+||+|+.|||++
T Consensus        77 ~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           77 LAFKVEHIEEVIAFLNEQGIETEPLRVDDFTGKK-MTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCCCCCEECTTTCCE-EEEEECTTCCEEEEEC
T ss_pred             EEEEeCCHHHHHHHHHHcCCccccccccCCCCcE-EEEEECCCCCEEEeeC
Confidence            9999999999999999999998766554555544 5889999999999975

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.82  E-value=4e-19  Score=130.58  Aligned_cols=120  Identities=23%  Similarity=0.356  Sum_probs=91.7

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC--CCCcccCCCCeeEEEEE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY--GVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~i~~~   99 (291)
                      ++++|+.|.|+|++++.+||+++|||++..+...++.++..+++..++ ..  .+.+....  ...+...+.|+.|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED-GA--RLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS-SC--EEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC-Cc--EEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            578999999999999999999999999987654444455667777643 22  34443322  12222245678999999


Q ss_pred             eCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          100 TED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       100 v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+|   +++++++|+++|+++...|...++|.+ .++|+||+||.|||+
T Consensus        79 v~d~~~v~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKLRQDGFAIAGEPRMTGDGYY-ESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHHHHcCCeEecCcccCCCCcE-EEEEECCCCCEEEEe
Confidence            999   889999999999999887776666644 488999999999986

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.81  E-value=1.3e-19  Score=134.45  Aligned_cols=123  Identities=20%  Similarity=0.200  Sum_probs=89.9

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEee-ecCCCceeeEEEecCCCCceeEEEeeccCCC-Cc---cc-CCCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKR-DVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TS---YD-IGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~-~~~g   92 (291)
                      .|+++++|++|.|+|++++++||+ +|||++..+. ..+..+...+++..++.    .+++..+... .+   +. .+.|
T Consensus         3 ~M~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~----~l~l~~~~~~~~~~~~~~~~~~g   77 (133)
T 3hdp_A            3 HMSLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGY----RVELVAPDGEDSPINKTIKKGST   77 (133)
T ss_dssp             CCCCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTE----EEEEEEESSTTCTHHHHTTTSCE
T ss_pred             ccceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCE----EEEEEecCCCCChHHHHHhcCCc
Confidence            478999999999999999999999 9999987652 22334455666665432    2333322211 11   11 1668


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEecCCcc--cCCCceEEEEEECCCCCEEEEEeC
Q 022871           93 FGHFAIATEDVYKLVENIRAKGGNVTREPGP--LKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~--~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++|++|.|+|+++++++|+++|+++...|..  ..+|. .++|++||||++|||++.
T Consensus        78 ~~hiaf~v~di~~~~~~l~~~G~~~~~~p~~~~~~~g~-~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           78 PYHICYEVEDIQKSIEEMSQIGYTLFKKAEIAPAIDNR-KVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEEEESCHHHHHHHHTTTTEEEEEEEEEEGGGTTE-EEEEEEETTTEEEEEEEC
T ss_pred             eEEEEEEcCCHHHHHHHHHHcCCccccCCeecccCCCc-eEEEEECCCceEEEEecC
Confidence            9999999999999999999999998765432  33444 458999999999999974

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.80  E-value=6.4e-19  Score=144.61  Aligned_cols=145  Identities=18%  Similarity=0.233  Sum_probs=109.6

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .+.+|+||.|.|+|++++.+||+++|||++..+.+      ..+++..++  .  .+.+.....     .+.++.|++|.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~------~~~~L~~g~--~--~l~l~~~~~-----~~~~~~hiaf~   87 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA------DAFTIQLGV--S--QIQFRAAAD-----GTKPFYHIAIN   87 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS------SEEEEEETT--E--EEEEEECCT-----TCCCCCEEEEE
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC------CEEEEEeCC--E--EEEEEECCC-----CCCCeeEEEEE
Confidence            47899999999999999999999999999877643      135566543  2  233332211     23368899999


Q ss_pred             eC--CHHHHHHHHHHcCCeEecC-Ccc----cCCCceEEEEEECCCCCEEEEEeCCCC------------CCCceeEEee
Q 022871          100 TE--DVYKLVENIRAKGGNVTRE-PGP----LKGGTTHIAFVKDPDGYIFELIQRGPT------------PEPLCQVMLR  160 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~-~~~----~~~g~~~~~~~~dp~G~~iel~~~~~~------------~~~~~hv~l~  160 (291)
                      |+  ++++++++|+++ +.+..+ +..    ..++. ..++|+||||+.+||++....            +.++.||+|.
T Consensus        88 V~~~dld~~~~rL~~~-v~~~~~~~~~~~~~~~~g~-~~~~f~DPdGn~iEl~~~~~~~~~~~~~~~~~~i~glghV~L~  165 (252)
T 3pkv_A           88 IAANHFQEGKAWLSGF-GELLTENDEDQAYFPFFNA-YSCYVEDPSGNIIELISRQQAAPVLDKPFSADQLLSIGEINIT  165 (252)
T ss_dssp             ECTTCHHHHHHHHTTS-SCCCCBTTBSCEEETTTTE-EEEEEECTTCCEEEEEEESSSSCCCCSCCCGGGCCEEEEEEEE
T ss_pred             ecHHHHHHHHHHHHhc-ceEeccCCccccccccCCe-EEEEEECCCCCEEEEEEeCCCCccccCCCCHHHCcEeeeEEEE
Confidence            84  699999999999 887552 221    23334 459999999999999987542            2368999999


Q ss_pred             eCCccccHHHHHhhhCCeeeee
Q 022871          161 VGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       161 v~D~~~~~~Fy~~~lG~~~~~~  182 (291)
                      |+|++++.+|| ++|||+....
T Consensus       166 v~d~~~~~~fl-~~LG~~~~~~  186 (252)
T 3pkv_A          166 TSDVEQAATRL-KQAELPVKLD  186 (252)
T ss_dssp             CSCHHHHHHHH-HHTTCCCCGG
T ss_pred             eCCHHHHHHHH-HHcCCCcccC
Confidence            99999999999 9999997754

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.80  E-value=3.5e-18  Score=129.68  Aligned_cols=128  Identities=16%  Similarity=0.232  Sum_probs=92.8

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeec-----------CCCceeeEEEecCCCCceeEEEee-ccCCC--
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV-----------PEEKYSNAFLGFGPEQSHFVVELT-YNYGV--   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--   84 (291)
                      +++++++|+.|.|+|++++.+||++ |||++..+...           +......+++..++....+.+-.. .+...  
T Consensus         7 ~~~~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~   85 (153)
T 1ss4_A            7 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   85 (153)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             ccccceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCCCcEEEEEEecCCCCccc
Confidence            4689999999999999999999999 99999865432           112345666766443233222111 11111  


Q ss_pred             C--cccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           85 T--SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        85 ~--~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .  ....+.|++|++|.|+|+++++++|+++|+++..++...++|.+ .++|+||+|+.|||++..
T Consensus        86 ~~~~~~~~~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  150 (153)
T 1ss4_A           86 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEEL  150 (153)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEEC
T ss_pred             ccCCCCCCCceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceE-EEEEECCCCCEEEEEecc
Confidence            0  11234578899999999999999999999999887766665544 588999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.80  E-value=3.3e-19  Score=136.92  Aligned_cols=127  Identities=22%  Similarity=0.449  Sum_probs=95.1

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC-Ccc-----cCCCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV-TSY-----DIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~g   92 (291)
                      +++++|+||+|.|+|++++++||+++|||++..+...+..+...+++..++.    .+++...... .+.     ..+.|
T Consensus         4 ~~~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~----~l~l~~~~~~~~~~~~~~~~~~~g   79 (161)
T 3oa4_A            4 EKSNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGES----KIELLEPLSEESPIAKFIQKRGEG   79 (161)
T ss_dssp             -CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTE----EEEEEEESSTTSHHHHHHHHHCSE
T ss_pred             cccCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCe----EEEEEeECCCCChHHHHhhcCCCC
Confidence            4588999999999999999999999999999887655555566777776532    2333322111 110     23568


Q ss_pred             eeEEEEEeCCHHHHHHHHHHcCCeEecC-CcccCCCceEEEEE--ECCCCCEEEEEeCCCC
Q 022871           93 FGHFAIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQRGPT  150 (291)
Q Consensus        93 ~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dp~G~~iel~~~~~~  150 (291)
                      +.|++|.|+|+++++++|+++|+.+... +....+|.. ++|+  +||+|++|||++....
T Consensus        80 ~~Hiaf~V~Did~~~~~l~~~G~~~~~~~~~~~~~g~~-~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           80 IHHIAIGVKSIEERIQEVKENGVQMINDEPVPGARGAQ-VAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEEEECSCHHHHHHHHHHTTCCBSCSSCEECGGGCE-EEEBCGGGTTTCCEEEEECCCC
T ss_pred             eEEEEEEECCHHHHHHHHHHCCCEecccCcccCCCCcE-EEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999999999998766 555444443 4666  4999999999998754

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.80  E-value=1e-18  Score=137.48  Aligned_cols=129  Identities=31%  Similarity=0.562  Sum_probs=100.5

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCc---------------eeEEEeeeecCcc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ---------------TTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.......+..+.++++..+....               ...++|....+..
T Consensus        32 ~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~  111 (187)
T 3vw9_A           32 DFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTE  111 (187)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETTGG
T ss_pred             eeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecCCC
Confidence            4679999999999999999999999999887766566667777776543211               2567776544322


Q ss_pred             -----eecc----CcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          216 -----EYTK----GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       216 -----~~~~----~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                           .+..    ..++.|++|.|+|++++++++    +++|+++...|...++  ++++|++||+|++|||++.....
T Consensus       112 ~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l----~~~G~~~~~~~~~~~~--~~~~~~~DPdG~~iel~~~~~~~  184 (187)
T 3vw9_A          112 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  184 (187)
T ss_dssp             GCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECGGGSG
T ss_pred             CCCccccccCCCCCCceeEEEEEECCHHHHHHHH----HHCCCeEeeCCccCCc--ceEEEEECCCCCEEEEEEccccc
Confidence                 1111    237889999999999999999    9999999988876555  35789999999999999987654

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.79  E-value=1.4e-18  Score=132.20  Aligned_cols=130  Identities=18%  Similarity=0.209  Sum_probs=93.1

Q ss_pred             CCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC------CceeeEEEecCCCCceeEEEeeccCCC----
Q 022871           15 EWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE------EKYSNAFLGFGPEQSHFVVELTYNYGV----   84 (291)
Q Consensus        15 ~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~----   84 (291)
                      .++++++++|+||.|.|+|++++++||+++|||++..+...+.      ..-...++..++. .  .+.+......    
T Consensus        11 ~~~~~~~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~l~l~~~~~~~~~~   87 (156)
T 3kol_A           11 VLAPGNLRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDG-T--ILDLFGEPELSPPD   87 (156)
T ss_dssp             CCCTTSSCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTS-C--EEEEEECTTCCCSS
T ss_pred             ccCccccceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCC-C--EEEEEecCCCCcCC
Confidence            3445679999999999999999999999999999876322111      0012355555432 2  2333322211    


Q ss_pred             -CcccCCCCeeEEEEEeC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           85 -TSYDIGTGFGHFAIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        85 -~~~~~~~g~~~i~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                       .+.....+..|++|.|+  |+++++++|+++|+++...|...++|.  .+||+||+||.|||++...
T Consensus        88 ~~~~~~~~~~~h~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~--~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           88 PNPEKTFTRAYHLAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGR--GVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             SSTTCCCSSCCEEEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCE--EEEEECTTSCEEEEEECCC
T ss_pred             CCCCCCCCceEEEEEEecHHHHHHHHHHHHHCCCccccCceecCCcc--EEEEECCCCCEEEEEecCC
Confidence             11224458899999998  999999999999999887776666553  5899999999999998764

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.79  E-value=1e-18  Score=128.39  Aligned_cols=120  Identities=20%  Similarity=0.254  Sum_probs=92.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce--eccCcceeEEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE--YTKGNAYAQVAIS  229 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~--~~~~~~~~h~~~~  229 (291)
                      +++.|+.|.|+|++++.+||+++|||++......++.++..+++..++   +..+++....+...  ...+.+..|++|.
T Consensus         2 m~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~---~~~l~l~~~~~~~~~~~~~~~g~~hi~~~   78 (127)
T 3e5d_A            2 MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFED---GARLEIMSRTDVTGKTTGENLGWAHIAIS   78 (127)
T ss_dssp             CCCCEEEEECSSHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSS---SCEEEEEEETTCCCCCCSSCSSCCCEEEE
T ss_pred             CEEEEEEEEECCHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCC---CcEEEEEecCCCCCCCCcCCCceEEEEEE
Confidence            578999999999999999999999999876544434445566665432   35677765443221  1244578999999


Q ss_pred             ecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      |+|   ++++++++    +++|+++..+|...++ +.+.+|++||+||+|||+
T Consensus        79 v~d~~~v~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           79 TGTKEAVDELTEKL----RQDGFAIAGEPRMTGD-GYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             cCCHHHHHHHHHHH----HHcCCeEecCcccCCC-CcEEEEEECCCCCEEEEe
Confidence            999   77888888    9999999888876665 358899999999999996

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.79  E-value=3e-18  Score=127.63  Aligned_cols=123  Identities=22%  Similarity=0.296  Sum_probs=90.0

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCC--Ccc-cCCCCeeE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV--TSY-DIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~g~~~   95 (291)
                      |++++|+|+.|.|+|++++.+||+++|||++..+....++.+..+++. +  ..  .+.+......  ..+ ..+.|+.|
T Consensus         1 M~i~~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~--~~--~l~l~~~~~~~~~~~~~~~~g~~h   75 (136)
T 2rk0_A            1 MSLSGVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G--GL--SIVLREHDGGGTDLFDETRPGLDH   75 (136)
T ss_dssp             -CEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T--SC--EEEEEEETTCSSSCCCTTSSEEEE
T ss_pred             CCCCcccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C--CC--EEEEEeCCCCcccCCCCCCCCcce
Confidence            578999999999999999999999999999987655333334445454 2  22  2333322111  111 23457899


Q ss_pred             EEEEe---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           96 FAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        96 i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ++|.|   +|+++++++|+++|+++.. +...++|  ..++|+||+|++|||++..+
T Consensus        76 ~~f~v~~~~d~~~~~~~l~~~G~~~~~-~~~~~~g--~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           76 LSFSVESMTDLDVLEERLAKAGAAFTP-TQELPFG--WILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             EEEEESSHHHHHHHHHHHHHHTCCBCC-CEEETTE--EEEEEECTTCCEEEEEEECT
T ss_pred             EEEEeCCHHHHHHHHHHHHHCCCcccC-ccccCCc--eEEEEECCCCCEEEEEEcCC
Confidence            99999   8999999999999999764 4444554  45889999999999998764

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.79  E-value=4.7e-18  Score=133.66  Aligned_cols=128  Identities=34%  Similarity=0.597  Sum_probs=98.0

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCc---------------eeEEEeeccCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQS---------------HFVVELTYNYG   83 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~   83 (291)
                      ....+|+|++|.|+|++++++||+++|||++..+...+.+.+..+++..++...               ...+++.....
T Consensus        30 ~~~~~l~Hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~  109 (187)
T 3vw9_A           30 TKDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWG  109 (187)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTCSSEEEEEEETT
T ss_pred             cceeEEEEEEEEeCCHHHHHHHHHHhcCcEEeeccccCCCceeEEEecCCCcccccccccchhhhcccCCceEEEEEecC
Confidence            356899999999999999999999999999998877667777888887654310               12344432111


Q ss_pred             -----CCccc----CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           84 -----VTSYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        84 -----~~~~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                           ..++.    ...|+.|++|.|+|+++++++|+++|+++...+...+++.  ++||+||+|+.|||++..
T Consensus       110 ~~~~~~~~~~~g~~~~~g~~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~--~~~~~DPdG~~iel~~~~  181 (187)
T 3vw9_A          110 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPN  181 (187)
T ss_dssp             GGGCTTCCCCCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECGG
T ss_pred             CCCCCccccccCCCCCCceeEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcce--EEEEECCCCCEEEEEEcc
Confidence                 11121    2238899999999999999999999999988876655544  478999999999999864

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.79  E-value=3.2e-18  Score=129.13  Aligned_cols=130  Identities=23%  Similarity=0.372  Sum_probs=94.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCC--CceeEEEeeccCCC-Cc---c--cCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE--QSHFVVELTYNYGV-TS---Y--DIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~---~--~~~   90 (291)
                      .++.+++|+.|.|+|++++.+||+++|||++..+...++.+...+++..++.  .....+++...... .+   +  ..+
T Consensus         5 ~m~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~   84 (148)
T 1jc4_A            5 DLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHN   84 (148)
T ss_dssp             CCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTT
T ss_pred             CccceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCC
Confidence            4689999999999999999999999999999877554444455667776542  01123444432211 11   1  133


Q ss_pred             --CCeeEEEEEeCCHHHHHHHHHHcCCeEe-cCCcccCCCceEEEEE--ECCCCCEEEEEeCCC
Q 022871           91 --TGFGHFAIATEDVYKLVENIRAKGGNVT-REPGPLKGGTTHIAFV--KDPDGYIFELIQRGP  149 (291)
Q Consensus        91 --~g~~~i~~~v~d~~~~~~~l~~~G~~~~-~~~~~~~~g~~~~~~~--~dp~G~~iel~~~~~  149 (291)
                        .|+.|++|.|+|+++++++|+++|+++. ..|....+|. .++++  +||+|+.|||++..+
T Consensus        85 ~~~g~~h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~-~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           85 GRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGN-RINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             TCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSC-EEEEBCGGGGTTSCEEEEECCC
T ss_pred             CCCceEEEEEECCCHHHHHHHHHHCCCeecCcCcccCCCce-EEEEEeecCCCcEEEEEEecCC
Confidence              6889999999999999999999999987 4455544554 34666  999999999998753

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.78  E-value=2.9e-18  Score=130.24  Aligned_cols=132  Identities=22%  Similarity=0.316  Sum_probs=87.8

Q ss_pred             ccchhccCCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC---CC
Q 022871            8 AANAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY---GV   84 (291)
Q Consensus         8 ~~~~~~~~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   84 (291)
                      +.....++...|++.+|+|+.|.|+|++++++||+++|||++..+.+      ...++..++  ..  +.+....   ..
T Consensus         8 ~~~~~~~~~~~m~i~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~~------~~~~l~~~~--~~--l~l~~~~~~~~~   77 (152)
T 3huh_A            8 SLKYKHHESIQMIIDRIDHLVLTVSDISTTIRFYEEVLGFSAVTFKQ------NRKALIFGA--QK--INLHQQEMEFEP   77 (152)
T ss_dssp             ------------CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEETT------TEEEEEETT--EE--EEEEETTBCCSS
T ss_pred             hhhhhhhhcCCcccceeeEEEEEeCCHHHHHHHHHhcCCCEEEEccC------CeEEEEeCC--eE--EEEeccCCcCCC
Confidence            33334445555789999999999999999999999999999987622      134555543  22  2232211   11


Q ss_pred             CcccCCCCeeEEEEEeC-CHHHHHHHHHHcCCeEecCCcccCCC--ceEEEEEECCCCCEEEEEeCCC
Q 022871           85 TSYDIGTGFGHFAIATE-DVYKLVENIRAKGGNVTREPGPLKGG--TTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        85 ~~~~~~~g~~~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .......+..|++|.+. |+++++++|+++|+++...|....++  ....++|+||+||+|||.+..+
T Consensus        78 ~~~~~~~g~~hi~f~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~  145 (152)
T 3huh_A           78 KASRPTPGSADLCFITSTPINDVVSEILQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVE  145 (152)
T ss_dssp             CCSSCCTTCCEEEEEESSCHHHHHHHHHHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC--
T ss_pred             cCcCCCCCccEEEEEecCCHHHHHHHHHHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEeccc
Confidence            12224557899999987 99999999999999987766544332  2356889999999999998764

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.78  E-value=1.7e-18  Score=128.08  Aligned_cols=122  Identities=19%  Similarity=0.253  Sum_probs=90.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCccee-------ccCccee
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-------TKGNAYA  224 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-------~~~~~~~  224 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++.+....++..+    ...+++....+....       ..+.+..
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~g~~   79 (134)
T 3rmu_A            4 GRLNHVAIAVPDLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLG----NTKMELLHPLGLDSPIAGFLQKNKAGGMH   79 (134)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECS----SSEEEEEEECSTTCTTHHHHHHCTTCEEE
T ss_pred             ceeeeEEEEeCCHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecC----CEEEEEEecCCCCchhhhhhhccCCCCce
Confidence            36899999999999999999999999987654443434555566543    245666554332211       2345889


Q ss_pred             EEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEE--ECCCCCeEEEEec
Q 022871          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPDGWKTVLVDN  281 (291)
Q Consensus       225 h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~Dp~G~~iel~~~  281 (291)
                      |++|.|+|++++++++    +++|+++..++......+.+.+|+  +||+|+.|||+|.
T Consensus        80 hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e~  134 (134)
T 3rmu_A           80 HICIEVDNINAAVMDL----KKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQA  134 (134)
T ss_dssp             EEEEEESCHHHHHHHH----HHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEcC
Confidence            9999999999999999    999999877754443334456666  8999999999973

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.78  E-value=3.5e-18  Score=126.44  Aligned_cols=123  Identities=20%  Similarity=0.270  Sum_probs=91.8

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.......++ ..+..+..+.  ....+.+.............+..|++|.|
T Consensus        11 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~~~l~l~~~~~~~~~~~~~~~~~~~~~v   87 (133)
T 4hc5_A           11 IAYVHSATIIVSDQEKALDFYVNTLGFEKVFDNQLDPN-MRFVTVVPPG--AQTQVALGLPSWYEDGRKPGGYTGISLIT   87 (133)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEETT-EEEEEEECTT--CSCEEEEECGGGCSSCCCSCEEEEEEEEE
T ss_pred             ccceeEEEEEECCHHHHHHHHHhCcCCcEeeecccCCC-ceEEEEECCC--CceEEEEecCcccccccCCCCeEEEEEEe
Confidence            45799999999999999999999999998765432222 2344443222  23456665433110112234678999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +|++++++++    +++|+++..+|...+++ .+.+|++||+|+.|||+|.
T Consensus        88 ~d~~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DP~G~~~el~ee  133 (133)
T 4hc5_A           88 RDIDEAYKTL----TERGVTFTKPPEMMPWG-QRATWFSDPDGNQFFLVEE  133 (133)
T ss_dssp             SCHHHHHHHH----HHTTCEESSSCEECTTS-CEEEEEECTTCEEEEEEEC
T ss_pred             CCHHHHHHHH----HHCCCEeecCCCcCCCC-CEEEEEECCCCCEEEEEeC
Confidence            9999999999    99999999888888874 4899999999999999873

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.78  E-value=4e-18  Score=126.15  Aligned_cols=123  Identities=20%  Similarity=0.345  Sum_probs=89.8

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC-CCCcccCCCCeeEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-GVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~i~   97 (291)
                      |.+++++|+.|.|+|++++.+||+++|||++..+..      ...++..++  ..+.+...... .......+.+..|++
T Consensus         6 m~~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~~------~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            6 MKISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFGA------GRIALEFGH--QKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT------TEEEEEETT--EEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             eEecccCEEEEEECCHHHHHHHHHHccCceEEEecC------CeEEEEcCC--EEEEEEcCCCCccccCCCCCCCccEEE
Confidence            568999999999999999999999999999987631      134555543  22222221111 111223456789999


Q ss_pred             EEeCC-HHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEeCCC
Q 022871           98 IATED-VYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        98 ~~v~d-~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |.|+| +++++++|+++|+++...|...++  +....++|+||+|+.|||++..+
T Consensus        78 ~~v~dd~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 999999999999998776644433  22356899999999999998753

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.78  E-value=3.4e-18  Score=126.48  Aligned_cols=120  Identities=23%  Similarity=0.315  Sum_probs=90.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeee-------cCcc---eec-cC
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-------YGVT---EYT-KG  220 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-------~~~~---~~~-~~  220 (291)
                      .++.|+.|.|+|++++.+||+++|||++......++......++..+    ...+++..+       ....   ..+ .+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            4 KAVHHVALIVSDYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCG----DIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEET----TEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             eeEeEEEEEeCCHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecC----CeEEEEEecccccccccCCccccCCCCCC
Confidence            56899999999999999999999999987665444433334445432    246666652       1111   112 45


Q ss_pred             cceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       221 ~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      .+..|++|.|+|++++++++    +++|+++...|...++ +.+.+|++||+|+.|||+|
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQEL----IALGIRVEEVRYDDYT-GKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHH----HHHTCCCCCCEECTTS-CCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHH----HhCCCcccceeccCCC-ceEEEEEECCCCCEEEEeC
Confidence            58899999999999999999    9999998776665554 3589999999999999986

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.78  E-value=4.2e-18  Score=128.18  Aligned_cols=123  Identities=45%  Similarity=0.725  Sum_probs=91.2

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......+++.+...++..+.......++|.........+.+.+..|++|.|
T Consensus         6 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v   85 (144)
T 2c21_A            6 SRRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGV   85 (144)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEE
T ss_pred             cceeEEEEEEeCCHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEEEe
Confidence            35689999999999999999999999998765433333455555554332124567776654322233456789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceE-EEEECCCCCeEEEEechh
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKI-TSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~-~~~~Dp~G~~iel~~~~~  283 (291)
                      +|++++++++    +++|+++..+     + +.+. +|++||+||.|||++..+
T Consensus        86 ~d~~~~~~~l----~~~G~~~~~~-----~-g~~~~~~~~DPdG~~iel~~~~~  129 (144)
T 2c21_A           86 EDVKELVADM----RKHDVPIDYE-----D-ESGFMAFVVDPDGYYIELLNEKT  129 (144)
T ss_dssp             SCHHHHHHHH----HHTTCCEEEE-----C-SSSSEEEEECTTSCEEEEEEHHH
T ss_pred             CCHHHHHHHH----HHCCCEEecc-----C-CcEEEEEEECCCCCEEEEEEcCc
Confidence            9999999999    9999998755     2 2344 499999999999998664

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.78  E-value=5.8e-19  Score=135.21  Aligned_cols=131  Identities=21%  Similarity=0.326  Sum_probs=95.0

Q ss_pred             chhccCCCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC--------------CCceeeEEEecCCCCceeE
Q 022871           10 NAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGFGPEQSHFV   75 (291)
Q Consensus        10 ~~~~~~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~   75 (291)
                      .+++.+.++.++++|+||+|.|+|++++++||+++|||++..+...+              ......+++..++.    .
T Consensus         6 ~~~~~~~~~~~~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~----~   81 (159)
T 3gm5_A            6 HHHSMSKNILDMRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPL----Q   81 (159)
T ss_dssp             ---CCCSSCCCGGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTE----E
T ss_pred             ccccccccccccccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCE----E
Confidence            44555666778999999999999999999999999999977554332              13455666665532    3


Q ss_pred             EEeeccCCC-Ccc-----cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCC--CCEEEEEeC
Q 022871           76 VELTYNYGV-TSY-----DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD--GYIFELIQR  147 (291)
Q Consensus        76 ~~~~~~~~~-~~~-----~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~--G~~iel~~~  147 (291)
                      +++...... .+.     ..+.|++|+||.|+|+++++++|+++|+++...+. .. | ..++|+.|||  |++|||++.
T Consensus        82 leL~~~~~~~~~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~-~~-g-~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A           82 LELIEPDENPSTWREFLDKNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGD-FE-G-GRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             EEEEEECSSSCHHHHHHHHHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEE-ET-T-EEEEEESCHHHHSSEEEEEEE
T ss_pred             EEEEEECCCCChhHHHhhcCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccc-cC-C-eeEEEEeccccCcEEEEEEec
Confidence            444332221 111     13668999999999999999999999999876532 22 3 3569999999  999999985

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.77  E-value=6.9e-18  Score=126.59  Aligned_cols=117  Identities=20%  Similarity=0.256  Sum_probs=84.5

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+|++.+|+||.|.|+|++++.+||+++|||++..+...  .  ...++..++..  ..+.+....      ...+..|+
T Consensus        22 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~--~--~~~~~~~~~~~--~~l~l~~~~------~~~~~~h~   89 (141)
T 3ghj_A           22 VPMNIKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDSA--R--RWNFLWVSGRA--GMVVLQEEK------ENWQQQHF   89 (141)
T ss_dssp             ----CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEETT--T--TEEEEEETTTT--EEEEEEECC------SSCCCCEE
T ss_pred             CceeeceecEEEEEeCCHHHHHHHHHHhcCCEEEEecCC--C--cEEEEEecCCC--cEEEEeccC------CCCCCceE
Confidence            345789999999999999999999999999999877532  2  13455554422  334444321      12367899


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +|.|+  |+++++++|+++|+++.. +....++....++|+||+||.|||+.
T Consensus        90 ~~~v~~~dld~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           90 SFRVEKSEIEPLKKALESKGVSVHG-PVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             EEEECGGGHHHHHHHHHHTTCCCEE-EEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             EEEEeHHHHHHHHHHHHHCCCeEeC-CcccCCCCceEEEEECCCCCEEEEEE
Confidence            99997  999999999999999874 33333333446999999999999975

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.77  E-value=2.2e-18  Score=127.74  Aligned_cols=121  Identities=17%  Similarity=0.175  Sum_probs=89.6

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeee-ccCCcceeEEEecccCCCceeEEEeeeecCccee-----ccCccee
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTV-DKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-----TKGNAYA  224 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-----~~~~~~~  224 (291)
                      ..++.|++|.|+|++++.+||+ +|||++.... ..+..+....++..+    ...++|..+.+....     ..+.+++
T Consensus         5 ~~~i~hv~i~v~Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~g~~   79 (133)
T 3hdp_A            5 SLKVHHIGYAVKNIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVING----GYRVELVAPDGEDSPINKTIKKGSTPY   79 (133)
T ss_dssp             CCCEEEEEEECSCHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEET----TEEEEEEEESSTTCTHHHHTTTSCEEE
T ss_pred             ceeeCEEEEEECCHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCC----CEEEEEEecCCCCChHHHHHhcCCceE
Confidence            3679999999999999999999 9999976542 122333445555432    356777665433211     0156888


Q ss_pred             EEEEEecchhhhHHHHHHHHHHhCCeeecCCcc--cCCCCceEEEEECCCCCeEEEEec
Q 022871          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQPGS--IPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       225 h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~--~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |++|.|+|+++++++|    +++|+++..+|..  ..+ +.+.+|++||||++|||+|+
T Consensus        80 hiaf~v~di~~~~~~l----~~~G~~~~~~p~~~~~~~-g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           80 HICYEVEDIQKSIEEM----SQIGYTLFKKAEIAPAID-NRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             EEEEEESCHHHHHHHH----TTTTEEEEEEEEEEGGGT-TEEEEEEEETTTEEEEEEEC
T ss_pred             EEEEEcCCHHHHHHHH----HHcCCccccCCeecccCC-CceEEEEECCCceEEEEecC
Confidence            9999999999999999    9999998876532  223 35889999999999999984

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.76  E-value=4.4e-18  Score=130.61  Aligned_cols=125  Identities=18%  Similarity=0.264  Sum_probs=94.0

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce------eccCccee
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE------YTKGNAYA  224 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~------~~~~~~~~  224 (291)
                      ..++.||+|.|.|++++.+||+++|||++.......+.+..+.++..+    ...++|........      ...+.++.
T Consensus         6 ~~~i~Hv~l~V~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~g~~   81 (161)
T 3oa4_A            6 SNKLDHIGIAVTSIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIG----ESKIELLEPLSEESPIAKFIQKRGEGIH   81 (161)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEET----TEEEEEEEESSTTSHHHHHHHHHCSEEE
T ss_pred             cCcCCEEEEEECCHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCC----CeEEEEEeECCCCChHHHHhhcCCCCeE
Confidence            457999999999999999999999999987654434444556666543    35677766543321      02356899


Q ss_pred             EEEEEecchhhhHHHHHHHHHHhCCeeecC-CcccCCCCceEEEE--ECCCCCeEEEEechhh
Q 022871          225 QVAISTDDVYKSAEVVNLVTQELGGKITRQ-PGSIPGLNTKITSF--VDPDGWKTVLVDNEDF  284 (291)
Q Consensus       225 h~~~~v~di~~~~~~l~~~~~~~G~~~~~~-p~~~~~~~~~~~~~--~Dp~G~~iel~~~~~~  284 (291)
                      |++|.|+|+++++++|    +++|+++..+ |...++ +.+++|+  +||+|++|||++..+-
T Consensus        82 Hiaf~V~Did~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~f~~~~DPdG~~iEl~~~~~~  139 (161)
T 3oa4_A           82 HIAIGVKSIEERIQEV----KENGVQMINDEPVPGAR-GAQVAFLHPRSARGVLYEFCEKKEQ  139 (161)
T ss_dssp             EEEEECSCHHHHHHHH----HHTTCCBSCSSCEECGG-GCEEEEBCGGGTTTCCEEEEECCCC
T ss_pred             EEEEEECCHHHHHHHH----HHCCCEecccCcccCCC-CcEEEEEeccCCCeEEEEEEecCCc
Confidence            9999999999999999    9999998777 544333 3466777  4999999999997653

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.75  E-value=5.6e-17  Score=127.19  Aligned_cols=129  Identities=33%  Similarity=0.588  Sum_probs=93.0

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCC---------------CceeEEEeeccCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPE---------------QSHFVVELTYNYG   83 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~   83 (291)
                      +.+.+++|+.|.|+|++++++||+++|||++..+...++..+..+++..++.               .....+++.....
T Consensus        27 ~~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~  106 (184)
T 2za0_A           27 TKDFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWG  106 (184)
T ss_dssp             GTTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETT
T ss_pred             ccceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCC
Confidence            3588999999999999999999999999999876543333455566654320               0112344432111


Q ss_pred             ----C-Cccc----CCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           84 ----V-TSYD----IGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        84 ----~-~~~~----~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                          . ..+.    ...++.|++|.|+|+++++++|+++|+++...+...+++.  ++||+||+|+.|||++...
T Consensus       107 ~~~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~--~~~~~DPdG~~iel~~~~~  179 (184)
T 2za0_A          107 TEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  179 (184)
T ss_dssp             GGGCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTT--CEEEECTTCCEEEEECTTT
T ss_pred             CCCCcccccccCCCCCCCeeEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCcee--EEEEECCCCCEEEEEecCc
Confidence                1 1111    1247899999999999999999999999888776554433  4889999999999998754

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.75  E-value=2e-17  Score=129.74  Aligned_cols=130  Identities=30%  Similarity=0.563  Sum_probs=96.2

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCC---------------CceeEEEeeeecCcc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE---------------DQTTVLELTYNYGVT  215 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~l~~~~~~~  215 (291)
                      ..++.|+.|.|+|++++.+||+++|||++.......+..+.++++..+..               .....++|....+..
T Consensus        29 ~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~~~~~~  108 (184)
T 2za0_A           29 DFLLQQTMLRIKDPKKSLDFYTRVLGLTLLQKLDFPAMKFSLYFLAYEDKNDIPKDKSEKTAWTFSRKATLELTHNWGTE  108 (184)
T ss_dssp             TCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGG
T ss_pred             ceeEEEEEEEeCCHHHHHHHHHHhcCCEEEEeccCCCCCceeEEecccccccCCcccchheeeecCCCceEEEEecCCCC
Confidence            46799999999999999999999999998765433333455665553210               013567776543211


Q ss_pred             -----eec----cCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022871          216 -----EYT----KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -----~~~----~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~  286 (291)
                           .+.    ...+..|++|.|+|++++++++    +++|+++..+|...++  ++.+||+||+||.|||++.....+
T Consensus       109 ~~~~~~~~~~~~~~~g~~hi~f~v~dvd~~~~~l----~~~G~~~~~~p~~~~~--~~~~~~~DPdG~~iel~~~~~~~~  182 (184)
T 2za0_A          109 DDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKIAT  182 (184)
T ss_dssp             GCTTCCCCCSSSSSCCEEEEEEECSCHHHHHHHH----HHTTCCEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGGG
T ss_pred             CCcccccccCCCCCCCeeEEEEEeCCHHHHHHHH----HHCCCeeecCCcCCCc--eeEEEEECCCCCEEEEEecCcccc
Confidence                 011    1247789999999999999999    9999999888876544  368999999999999999876543

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.74  E-value=1.1e-17  Score=122.44  Aligned_cols=119  Identities=21%  Similarity=0.313  Sum_probs=85.9

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-cceeEEEecccCCCceeEEEeeeecCcce---eccCcceeEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTE---YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~---~~~~~~~~h~~  227 (291)
                      .++.|+.|.|+|++++.+||+++|||++.......+ ..+.. ++..++    ..++|........   .+.+++..|++
T Consensus         4 ~~i~hi~l~v~d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~-~~~~~~----~~l~l~~~~~~~~~~~~~~~~g~~~~~   78 (126)
T 2p25_A            4 KEIHHVAINASNYQATKNFYVEKLGFEVLRENHRPEKNDIKL-DLKLGS----QELEIFISDQFPARPSYPEALGLRHLA   78 (126)
T ss_dssp             SCCCCEEEEESCHHHHHHHHTTTTCCEEEEEEEEGGGTEEEE-EEEETT----EEEEEEECTTCCCCCCSSCCSSCCCEE
T ss_pred             cccceEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCcceEE-EEecCC----eEEEEEeccCCCCCCCCCCCccceEEE
Confidence            468999999999999999999999999875432222 22222 233222    2566654322111   12345788999


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      |.|+|++++++++    +++|+++...|...++ +.+.+|++||+|+.|||+|
T Consensus        79 ~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           79 FKVEHIEEVIAFL----NEQGIETEPLRVDDFT-GKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             EECSCHHHHHHHH----HHTTCCCCCCEECTTT-CCEEEEEECTTCCEEEEEC
T ss_pred             EEeCCHHHHHHHH----HHcCCccccccccCCC-CcEEEEEECCCCCEEEeeC
Confidence            9999999999999    9999998766654444 3588999999999999985

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.74  E-value=3.1e-17  Score=122.13  Aligned_cols=119  Identities=19%  Similarity=0.203  Sum_probs=89.0

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc--ee-ccCcceeEEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT--EY-TKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--~~-~~~~~~~h~~~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++.......+..+...++. +    ...+.|....+..  .. ..+++..|++|.
T Consensus         5 ~i~hv~l~v~Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~-~----~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~   79 (136)
T 2rk0_A            5 GVSHVSLTVRDLDISCRWYTEILDWKELVRGRGDTTSFAHGVLP-G----GLSIVLREHDGGGTDLFDETRPGLDHLSFS   79 (136)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECT-T----SCEEEEEEETTCSSSCCCTTSSEEEEEEEE
T ss_pred             cccEEEEEeCCHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEc-C----CCEEEEEeCCCCcccCCCCCCCCcceEEEE
Confidence            57899999999999999999999999876554333334555554 2    3567776543221  11 234578899999


Q ss_pred             e---cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          230 T---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |   +|++++++++    +++|+++. +|...++  ++.+||+||+||+|||++..+
T Consensus        80 v~~~~d~~~~~~~l----~~~G~~~~-~~~~~~~--g~~~~~~DPdG~~iel~~~~~  129 (136)
T 2rk0_A           80 VESMTDLDVLEERL----AKAGAAFT-PTQELPF--GWILAFRDADNIALEAMLGRE  129 (136)
T ss_dssp             ESSHHHHHHHHHHH----HHHTCCBC-CCEEETT--EEEEEEECTTCCEEEEEEECT
T ss_pred             eCCHHHHHHHHHHH----HHCCCccc-CccccCC--ceEEEEECCCCCEEEEEEcCC
Confidence            9   8888888888    99999976 4544454  389999999999999998654

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.74  E-value=5.4e-17  Score=121.31  Aligned_cols=118  Identities=19%  Similarity=0.307  Sum_probs=84.0

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcee---eEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++..+...  ..+.   ..++..++  .  .+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g~--~--~l~l~~~~~~----~~~~~~h~   70 (139)
T 1r9c_A            1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIGD--I--WVAIMQGEKL----AERSYNHI   70 (139)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEETT--E--EEEEEECCCC----SSCCSCEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEECC--E--EEEEEeCCCC----CCCCeeEE
Confidence            578999999999999999999999999998766431  1110   01444432  2  3334332111    13478999


Q ss_pred             EEEeC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+  |+++++++|+++|+++..++...+++.. .++|+||+||.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           71 AFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCcccCCCCeE-EEEEECCCCCEEEEEeCC
Confidence            99998  9999999999999998776555544444 489999999999999864

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.74  E-value=6.4e-17  Score=119.83  Aligned_cols=116  Identities=16%  Similarity=0.110  Sum_probs=86.7

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .+.+++|+.|.|+|++++.+||+++|||++....+      ....+..++ ..  .+.+.......+ ....+..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~------~~~~~~~~~-~~--~l~l~~~~~~~~-~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP------RYVAFPSSG-DA--LFAIWSGGEEPV-AEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS------SEEEEECST-TC--EEEEESSSCCCC-TTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC------CEEEEEcCC-Cc--EEEEEeCCCCCc-CCCCCcceEEEE
Confidence            46799999999999999999999999999866532      123343322 22  233433221111 233467899999


Q ss_pred             eCC---HHHHHHHHHH---cCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          100 TED---VYKLVENIRA---KGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v~d---~~~~~~~l~~---~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+|   +++++++|++   +|+++..+|...++|  +.++|+|||||+|||.+.
T Consensus        80 v~~~~dv~~~~~~l~~~~~~G~~~~~~p~~~~~g--~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEWTKQKSHQIIVIKEPYTDVFG--RTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHHHHCSSSCCEEEEEEEEETTE--EEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHhhhcCCCEEeeCCcccCce--EEEEEECCCCCEEEEEeC
Confidence            986   9999999999   999998877777776  458999999999999874

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.74  E-value=9.9e-18  Score=128.29  Aligned_cols=121  Identities=16%  Similarity=0.156  Sum_probs=91.3

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC--------------CcceeEEEecccCCCceeEEEeeeecCcce
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTE  216 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~  216 (291)
                      ..++.|++|.|+|++++.+||+++|||++......+              +.+..+.++..+    ...++|....+...
T Consensus        17 ~~~i~Hv~i~V~Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g----~~~leL~~~~~~~~   92 (159)
T 3gm5_A           17 MRNTVQIGIVVRDIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELG----PLQLELIEPDENPS   92 (159)
T ss_dssp             GGGCEEEEEECSCHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEET----TEEEEEEEECSSSC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecC----CEEEEEEEECCCCC
Confidence            467999999999999999999999999976543222              123445555532    35677776543321


Q ss_pred             -e-----ccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCC--CCeEEEEech
Q 022871          217 -Y-----TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPD--GWKTVLVDNE  282 (291)
Q Consensus       217 -~-----~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~--G~~iel~~~~  282 (291)
                       .     ..+.+++|++|.|+|+++++++|    +++|+++...+.. .  +.+++|++|||  |++|||+|++
T Consensus        93 ~~~~~l~~~~~g~~Hiaf~v~di~~~~~~l----~~~G~~~~~~~~~-~--g~~~~~~~dpd~~G~~iEl~e~~  159 (159)
T 3gm5_A           93 TWREFLDKNGEGIHHIAFVVKDMDRKVEEL----YRKGMKVIQKGDF-E--GGRYAYIDTLRALKVMIELLENY  159 (159)
T ss_dssp             HHHHHHHHHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEE-T--TEEEEEESCHHHHSSEEEEEEEC
T ss_pred             hhHHHhhcCCceEEEEEEEcCCHHHHHHHH----HHCCCcEeecccc-C--CeeEEEEeccccCcEEEEEEecC
Confidence             1     13568999999999999999999    9999998766532 2  36899999999  9999999863

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.73  E-value=4.3e-17  Score=118.22  Aligned_cols=115  Identities=17%  Similarity=0.186  Sum_probs=83.9

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      +++++|+.|.|+|++++.+||+++|||++....+    .  .+++..++.  .+.+  ...........+.++ |++|.|
T Consensus         3 ~m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~~----~--~~~~~~~~~--~l~l--~~~~~~~~~~~~~~~-~~~~~v   71 (118)
T 2i7r_A            3 AMNLNQLDIIVSNVPQVCADLEHILDKKADYAND----G--FAQFTIGSH--CLML--SQNHLVPLENFQSGI-IIHIEV   71 (118)
T ss_dssp             -CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----T--EEEEEETTE--EEEE--ESSCSSSCCCCCSCE-EEEEEC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeCC----C--EEEEEeCCe--EEEE--EcCCCCCcccCCCeE-EEEEEE
Confidence            4689999999999999999999999999875422    1  344554432  2322  221111111223344 799999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +|+++++++|+++|+++..+|.+.++|.+. ++|+||+|+.|||++.
T Consensus        72 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~-~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           72 EDVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             SCHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CCHHHHHHHHHHCCCceecCCccccCccEE-EEEECCCccEEEEEec
Confidence            999999999999999987777777766554 8899999999999874

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.73  E-value=4.2e-17  Score=122.93  Aligned_cols=127  Identities=17%  Similarity=0.207  Sum_probs=91.1

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCC--CceeEEEeeeecCcce------eccC--
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEE--DQTTVLELTYNYGVTE------YTKG--  220 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~l~~~~~~~~------~~~~--  220 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......++.+....++..++.  ..+..++|........      ...+  
T Consensus         7 ~~~~~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~   86 (148)
T 1jc4_A            7 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   86 (148)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCC
Confidence            45789999999999999999999999998765433333344555554331  1125677766443211      0133  


Q ss_pred             cceeEEEEEecchhhhHHHHHHHHHHhCCeee-cCCcccCCCCceEEEE--ECCCCCeEEEEech
Q 022871          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKIT-RQPGSIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       221 ~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~-~~p~~~~~~~~~~~~~--~Dp~G~~iel~~~~  282 (291)
                      .+..|++|.|+|++++++++    +++|+++. ..|...++ +.+.+|+  +||+|+.|||++..
T Consensus        87 ~g~~h~~~~v~d~~~~~~~l----~~~G~~~~~~~p~~~~~-g~~~~~~~~~DPdG~~iel~~~~  146 (148)
T 1jc4_A           87 AGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTG-GNRINFMHPKSGKGVLIELTQYP  146 (148)
T ss_dssp             CEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSS-SCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CceEEEEEECCCHHHHHHHH----HHCCCeecCcCcccCCC-ceEEEEEeecCCCcEEEEEEecC
Confidence            57889999999999999999    99999987 44544334 3466777  99999999999853

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.73  E-value=7.8e-17  Score=119.34  Aligned_cols=118  Identities=20%  Similarity=0.290  Sum_probs=85.2

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCcee---eEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYS---NAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      |+++|+|+.|.|+|++++.+||+++|||++..+.+  +..+.   ..++..++    ..+.+......    ...+..|+
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~~----~~l~l~~~~~~----~~~~~~h~   70 (133)
T 2p7o_A            1 MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIAG----LWICIMEGDSL----QERTYNHI   70 (133)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEETT----EEEEEEECSSC----CCCCSCEE
T ss_pred             CCceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeCC----EEEEEecCCCC----CCCCeeEE
Confidence            57899999999999999999999999999876532  11110   01444432    23444332111    14578999


Q ss_pred             EEEe--CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIAT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|  +|+++++++|+++|+++...+....++.. .++|+||+|+.|||++..
T Consensus        71 ~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iel~~~~  123 (133)
T 2p7o_A           71 AFQIQSEEVDEYTERIKALGVEMKPERPRVQGEGR-SIYFYDFDNHLFELHAGT  123 (133)
T ss_dssp             EEECCGGGHHHHHHHHHHHTCCEECCCCCCTTCCC-EEEEECSSSCEEEEECSS
T ss_pred             EEEcCHHHHHHHHHHHHHCCCcccCCCccCCCCee-EEEEECCCCCEEEEEcCC
Confidence            9999  49999999999999998887665544444 489999999999999875

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.73  E-value=8e-17  Score=118.20  Aligned_cols=119  Identities=15%  Similarity=0.203  Sum_probs=86.5

Q ss_pred             CCCceeeeEEEEEe--CCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           18 KKDKRRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        18 ~~~~~~i~hv~l~v--~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      +|++.+++|+.|.|  +|++++.+||+++|||++..+.....+ ....++..++  ..  +.+......    ...+..|
T Consensus         5 ~m~~~~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~-~~~~~~~~~~--~~--l~l~~~~~~----~~~~~~~   75 (126)
T 2qqz_A            5 RNYIQGIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKK-RGGCWFKCGN--QE--IHIGVEQNF----NPAKRAH   75 (126)
T ss_dssp             CCCEEEEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGG-GCCEEEEETT--EE--EEEEECTTC----CCCSSSC
T ss_pred             hcccceeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccC-CCceEEEeCC--EE--EEEEecCCC----CCCCceE
Confidence            46799999999999  899999999999999998765321100 0124555543  22  333322111    1247789


Q ss_pred             EEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           96 FAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++|.|+|+++++++|+++|+++...+. . +|. ..++|+||+|+.|||++..
T Consensus        76 ~~f~v~d~~~~~~~l~~~G~~~~~~~~-~-~g~-~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           76 PAFYVLKIDEFKQELIKQGIEVIDDHA-R-PDV-IRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             EEEEETTHHHHHHHHHHTTCCCEEECS-S-TTE-EEEEEECTTSCEEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHcCCCccCCCC-C-CCe-eEEEEECCCCCEEEEEeCC
Confidence            999999999999999999999876652 2 343 3589999999999999853

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.73  E-value=3.9e-17  Score=123.86  Aligned_cols=124  Identities=15%  Similarity=0.206  Sum_probs=90.3

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeecc-----------CCcceeEEEecccCCCceeEEEeeeecCcce----
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK-----------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----  216 (291)
                      .++.|+.|.|+|++++.+||++ |||++......           ++......++..++.  ...++|........    
T Consensus        10 ~~i~hv~l~v~D~~~a~~FY~~-lG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g--~~~l~l~~~~~~~~~~~~   86 (153)
T 1ss4_A           10 LRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIADH   86 (153)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCBC
T ss_pred             cceeeEEEEeCCHHHHHHHHHH-CCCEEEeeccCCcchhheeeCCCCCcEEEEEEECCCC--CcEEEEEEecCCCCcccc
Confidence            4689999999999999999999 99998754321           112234455553322  24566654311110    


Q ss_pred             ---eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          217 ---YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       217 ---~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                         ...+.++.|++|.|+|++++++++    +++|+++..+|...++ +.+.+|++||+|+.|||++...
T Consensus        87 ~~~~~~~~g~~hl~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           87 RTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             TTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEECC
T ss_pred             cCCCCCCCceEEEEEEeCCHHHHHHHH----HHCCCeecCCCcccCC-ceEEEEEECCCCCEEEEEeccC
Confidence               123457789999999999999999    9999999888866665 4588999999999999998643

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.73  E-value=3.3e-17  Score=123.94  Aligned_cols=125  Identities=12%  Similarity=0.082  Sum_probs=83.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEEEe
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    ..+..+  ..++   +..+.+........ ....++..|++|.|
T Consensus         5 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~----~~~~~~--~~~~---g~~l~l~~~~~~~~~~~~~~~~~~l~f~v   75 (148)
T 3rhe_A            5 SDPNLVLFYVKNPAKSEEFYKNLLDTQPIESS----PTFAMF--VMKT---GLRLGLWAQEEIEPKAHQTGGGMELSFQV   75 (148)
T ss_dssp             --CEEEEEEESCHHHHHHHHHHHHTCCCSEEC----SSEEEE--ECTT---SCEEEEEEGGGCSSCCC----CEEEEEEC
T ss_pred             ccccEEEEEeCCHHHHHHHHHHHcCCEEeccC----CCEEEE--EcCC---CcEEEEecCCcCCccccCCCCeEEEEEEc
Confidence            46899999999999999999999999976542    123333  3212   34555543221111 11234678999999


Q ss_pred             cc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhhhhcC
Q 022871          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEIQSE  291 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~~~~~  291 (291)
                      +|   ++++++++    +++|+++..+|...++ | +.+||+||+|++|||++......+..||
T Consensus        76 ~d~~dvd~~~~~l----~~~G~~i~~~p~~~~~-G-~~~~~~DPdG~~iel~~~~~~a~~~~~~  133 (148)
T 3rhe_A           76 NSNEMVDEIHRQW----SDKEISIIQPPTQMDF-G-YTFVGVDPDEHRLRIFCLKRTAENLYFQ  133 (148)
T ss_dssp             SCHHHHHHHHHHH----HHTTCCEEEEEEEETT-E-EEEEEECTTCCEEEEEEEC---------
T ss_pred             CCHHHHHHHHHHH----HhCCCEEEeCCeecCC-C-cEEEEECCCCCEEEEEEcChhHhhhhcc
Confidence            87   77777777    9999999888888777 3 8899999999999999988877666554

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.72  E-value=4.8e-17  Score=118.10  Aligned_cols=115  Identities=19%  Similarity=0.241  Sum_probs=85.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.++++ |+.|.|+|++++.+||+++|||++....    +  ...++..++ ...+.+.+.....     ...+..|++|
T Consensus         4 m~i~~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~~----~--~~~~~~~~~-~~~~~l~l~~~~~-----~~~~~~~~~~   70 (119)
T 2pjs_A            4 MAVRRV-VANIATPEPARAQAFYGDILGMPVAMDH----G--WIVTHASPL-EAHAQVSFAREGG-----SGTDVPDLSI   70 (119)
T ss_dssp             -CEEEE-EEEEECSCGGGGHHHHTTTTCCCEEEEC----S--SEEEEEEEE-EEEEEEEEESSSB-----TTBCCCSEEE
T ss_pred             cceeEE-EEEEEcCCHHHHHHHHHHhcCCEEEecC----C--EEEEEecCC-CCcEEEEEEcCCC-----CCCceeEEEE
Confidence            568899 9999999999999999999999987641    1  123343321 1123344433211     1235679999


Q ss_pred             EeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|+|+++++++|+++|+++..++.+.++|.. .++++||+|+.|||++.
T Consensus        71 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           71 EVDNFDEVHARILKAGLPIEYGPVTEAWGVQ-RLFLRDPFGKLINILSH  118 (119)
T ss_dssp             EESCHHHHHHHHHHTTCCCSEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             EECCHHHHHHHHHHCCCccccCCccCCCccE-EEEEECCCCCEEEEEec
Confidence            9999999999999999998777777666644 58999999999999875

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.72  E-value=6.6e-17  Score=122.08  Aligned_cols=122  Identities=21%  Similarity=0.353  Sum_probs=85.9

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC-CCCcccCCCCeeE
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-GVTSYDIGTGFGH   95 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~   95 (291)
                      +++++.+|+||.|.|+|++++++||+++|||++....+   +   ..++..++.  .+.+...... .+......+|..|
T Consensus        21 ~~m~i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~---~---~~~l~~g~~--~l~l~~~~~~~~~~~~~~~~g~~~   92 (147)
T 3zw5_A           21 QSMLIRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFKE---D---RKALCFGDQ--KFNLHEVGKEFEPKAAHPVPGSLD   92 (147)
T ss_dssp             HHTSCEEEEEEEEEESCHHHHHHHHHHHHCCEEEEETT---T---EEEEEETTE--EEEEEETTSCCSSCCSSCCTTCCE
T ss_pred             cceecccccEEEEEeCCHHHHHHHHHHhcCCEEEecCC---C---ceEEEECCc--EEEEEEcCCCcCcccCCCCCCCce
Confidence            45679999999999999999999999999999985422   1   244555432  2222221111 1111224457788


Q ss_pred             EEEEeC-CHHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEe
Q 022871           96 FAIATE-DVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        96 i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~  146 (291)
                      ++|.+. |+++++++|+++|+.+...|....+  |....++|+||||++|||++
T Consensus        93 ~~~~~~~dl~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           93 ICLITEVPLEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EEEECSSCHHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEEEeccCHHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            999886 9999999999999998755543322  22345899999999999986

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.72  E-value=3.6e-17  Score=124.35  Aligned_cols=122  Identities=21%  Similarity=0.223  Sum_probs=89.1

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeecc--------CCcceeEEEecccCCCceeEEEeeeecCcce-----e
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDK--------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-----Y  217 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-----~  217 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......        ..+..  .++..++   +..+++.......+     .
T Consensus        17 ~~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~l~l~~~~~~~~~~~~~~   91 (156)
T 3kol_A           17 LRKVHHIALNVQDMQASRYFYGTILGLHELTDDEVPATLTELVASGKV--ANFITPD---GTILDLFGEPELSPPDPNPE   91 (156)
T ss_dssp             SCCCCEEEEEESCHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSE--EEEECTT---SCEEEEEECTTCCCSSSSTT
T ss_pred             cceEeEEEEEeCCHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcE--EEEEeCC---CCEEEEEecCCCCcCCCCCC
Confidence            45899999999999999999999999997753211        11222  2333322   24566655432211     1


Q ss_pred             ccCcceeEEEEEec--chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          218 TKGNAYAQVAISTD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       218 ~~~~~~~h~~~~v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ....+..|++|.|+  |++++++++    +++|+++..+|...++  ++.+||+||+||.|||++...
T Consensus        92 ~~~~~~~h~~~~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A           92 KTFTRAYHLAFDIDPQLFDRAVTVI----GENKIAIAHGPVTRPT--GRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             CCCSSCCEEEEECCGGGHHHHHHHH----HHTTCCEEEEEEEC-C--CEEEEEECTTSCEEEEEECCC
T ss_pred             CCCCceEEEEEEecHHHHHHHHHHH----HHCCCccccCceecCC--ccEEEEECCCCCEEEEEecCC
Confidence            13457899999998  899999999    9999999888877655  479999999999999998764

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.72  E-value=6.5e-17  Score=122.26  Aligned_cols=120  Identities=12%  Similarity=0.074  Sum_probs=83.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc-ccCCCCeeEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-YDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~~   98 (291)
                      |+++++|+.|.|+|++++++||+++|||++..+.+      ...++..+++ .  .+.+.......+ .....+..|++|
T Consensus         3 m~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~------~~~~~~~~~g-~--~l~l~~~~~~~~~~~~~~~~~~l~f   73 (148)
T 3rhe_A            3 MLSDPNLVLFYVKNPAKSEEFYKNLLDTQPIESSP------TFAMFVMKTG-L--RLGLWAQEEIEPKAHQTGGGMELSF   73 (148)
T ss_dssp             ----CEEEEEEESCHHHHHHHHHHHHTCCCSEECS------SEEEEECTTS-C--EEEEEEGGGCSSCCC----CEEEEE
T ss_pred             ccccccEEEEEeCCHHHHHHHHHHHcCCEEeccCC------CEEEEEcCCC-c--EEEEecCCcCCccccCCCCeEEEEE
Confidence            57899999999999999999999999999876532      1345554322 2  233332211111 122346689999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      .|+|   +++++++|+++|+++..+|...++|  ..++|+||+|+.|||++..+.
T Consensus        74 ~v~d~~dvd~~~~~l~~~G~~i~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~  126 (148)
T 3rhe_A           74 QVNSNEMVDEIHRQWSDKEISIIQPPTQMDFG--YTFVGVDPDEHRLRIFCLKRT  126 (148)
T ss_dssp             ECSCHHHHHHHHHHHHHTTCCEEEEEEEETTE--EEEEEECTTCCEEEEEEEC--
T ss_pred             EcCCHHHHHHHHHHHHhCCCEEEeCCeecCCC--cEEEEECCCCCEEEEEEcChh
Confidence            9987   9999999999999998877777775  458999999999999987643

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.71  E-value=5.7e-17  Score=119.88  Aligned_cols=119  Identities=23%  Similarity=0.250  Sum_probs=86.7

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc---eeccCcceeEEE
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT---EYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~---~~~~~~~~~h~~  227 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....   + ....  +..+    ...+.+.......   .....++..|++
T Consensus         8 ~~~i~hi~l~v~D~~~a~~FY~~~lG~~~~~~~---~-~~~~--~~~~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~   77 (133)
T 3ey7_A            8 ISHLDHLVLTVADIPTTTNFYEKVLGMKAVSFG---A-GRIA--LEFG----HQKINLHQLGNEFEPKAQNVRVGSADLC   77 (133)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---T-TEEE--EEET----TEEEEEEETTSCCSSCCTTCCTTCCEEE
T ss_pred             ecccCEEEEEECCHHHHHHHHHHccCceEEEec---C-CeEE--EEcC----CEEEEEEcCCCCccccCCCCCCCccEEE
Confidence            357899999999999999999999999987642   1 1222  2222    2445554432211   112345789999


Q ss_pred             EEecc-hhhhHHHHHHHHHHhCCeeecCCcccCCC--CceEEEEECCCCCeEEEEechh
Q 022871          228 ISTDD-VYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       228 ~~v~d-i~~~~~~l~~~~~~~G~~~~~~p~~~~~~--~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |.|+| ++++++++    +++|+++..+|...++.  +.+.+|++||+||+|||++..+
T Consensus        78 ~~v~dd~~~~~~~l----~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           78 FITDTVLSDAMKHV----EDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             EEeCcHHHHHHHHH----HHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            99997 99999999    99999998877554432  2378999999999999998753

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.71  E-value=1.1e-16  Score=118.54  Aligned_cols=116  Identities=12%  Similarity=0.066  Sum_probs=85.8

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      ...++.|+.|.|+|++++.+||+++|||++.....    .+..+  ..++   +..+.+....... ....++..|++|.
T Consensus        10 ~~~~i~~v~l~v~D~~~s~~FY~~~lG~~~~~~~~----~~~~~--~~~~---~~~l~l~~~~~~~-~~~~~~~~~~~~~   79 (132)
T 3sk2_A           10 PTITPNLQLVYVSNVERSTDFYRFIFKKEPVFVTP----RYVAF--PSSG---DALFAIWSGGEEP-VAEIPRFSEIGIM   79 (132)
T ss_dssp             CCCCCCEEEEECSCHHHHHHHHHHHHTCCCSEECS----SEEEE--ECST---TCEEEEESSSCCC-CTTSCCCEEEEEE
T ss_pred             CcceeeEEEEEECCHHHHHHHHHHHcCCeEEEcCC----CEEEE--EcCC---CcEEEEEeCCCCC-cCCCCCcceEEEE
Confidence            34689999999999999999999999999765422    23332  2111   2445554332111 1233467899999


Q ss_pred             ecc---hhhhHHHHHHHHHH---hCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          230 TDD---VYKSAEVVNLVTQE---LGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~---~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |+|   ++++++++    ++   +|+++..+|...++  ++.+||+|||||+|||++.
T Consensus        80 v~~~~dv~~~~~~l----~~~~~~G~~~~~~p~~~~~--g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           80 LPTGEDVDKLFNEW----TKQKSHQIIVIKEPYTDVF--GRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             ESSHHHHHHHHHHH----HHCSSSCCEEEEEEEEETT--EEEEEEECTTCCEEEEEEC
T ss_pred             eCCHHHHHHHHHHH----HhhhcCCCEEeeCCcccCc--eEEEEEECCCCCEEEEEeC
Confidence            986   77887777    99   99999988888776  3899999999999999975

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.71  E-value=1.6e-16  Score=118.40  Aligned_cols=120  Identities=16%  Similarity=0.091  Sum_probs=87.2

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-ec-cCcceeEEEEEec
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YT-KGNAYAQVAISTD  231 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~-~~~~~~h~~~~v~  231 (291)
                      ..++.|.|+|++++.+||+++|||++......+ +......+..+    ...+.+....+... .. .+.+.+|++|.|+
T Consensus         3 ~~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~   77 (137)
T 3itw_A            3 HMVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTG----GGIVMVRRTGEPYTVSCAGGHTCKQVIVWVS   77 (137)
T ss_dssp             CCEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECS----SSEEEEEETTCCSSCEECCCCCCCEEEEEES
T ss_pred             eEEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecC----CeEEEEEecCCCcCccCCCCCcEEEEEEEeC
Confidence            457899999999999999999999987654333 32334444422    23455543222211 11 2223349999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |++++++++    +++|+++..+|...++ +.+.+||+||+||.|||++...
T Consensus        78 dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           78 DVDEHFMRS----TAAGADIVQPLQDKPW-GLRQYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEEETT-TEEEEEEECSSSCEEEEEECC-
T ss_pred             CHHHHHHHH----HHcCCeeccCccccCC-CcEEEEEECCCCCEEEEEEEcC
Confidence            999999999    9999999988888776 3589999999999999999654

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.71  E-value=6.3e-17  Score=121.72  Aligned_cols=120  Identities=16%  Similarity=0.231  Sum_probs=86.7

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |.++++. +.|.|+|++++++||+++|||++..+...++.......+  +.      +.+......  .....+..|++|
T Consensus         3 M~i~~i~-i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~--~~------~~l~~~~~~--~~~~~~~~hl~f   71 (144)
T 3r6a_A            3 MKILQIL-SRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQI--ST------ILLIAGSEE--ALKPFRNTQATF   71 (144)
T ss_dssp             CCEEEEE-EEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEE--TT------EEEEESCHH--HHGGGGGCCEEE
T ss_pred             EEEEEEE-EEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEe--cc------EEEecCCcc--cCCCCcceEEEE
Confidence            4578887 999999999999999999999987765433333333322  21      112111100  001124589999


Q ss_pred             EeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022871           99 ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus        99 ~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                      .|+|+++++++|+++|+++..+|...++|  +.++|+||+|+.|||++..+.+
T Consensus        72 ~V~d~d~~~~~l~~~G~~v~~~p~~~~~G--~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           72 LVDSLDKFKTFLEENGAEIIRGPSKVPTG--RNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             EESCHHHHHHHHHHTTCEEEEEEEEETTE--EEEEEECTTSCEEEEEEECC--
T ss_pred             EeCCHHHHHHHHHHcCCEEecCCccCCCc--eEEEEECCCCCEEEEEEcCCcc
Confidence            99999999999999999988877777776  3589999999999999987543

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.71  E-value=9e-17  Score=121.51  Aligned_cols=116  Identities=20%  Similarity=0.288  Sum_probs=84.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeE--------EEeeccCCCCcccCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFV--------VELTYNYGVTSYDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~   90 (291)
                      .|..++.|+.|.|+|++++++||+++|||++... .  +..  ..++..++....+.        ..+...      ...
T Consensus        21 gM~~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~-~--~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~------~~~   89 (148)
T 2r6u_A           21 GMTGRIVHFEIPFDDGDRARAFYRDAFGWAIAEI-P--DMD--YSMVTTGPVGESGMPDEPGYINGGMMQR------GEV   89 (148)
T ss_dssp             TTCCCEEEEEEEESSHHHHHHHHHHHHCCEEEEE-T--TTT--EEEEECSCBCTTSSBCSSSCBCEEEEES------SSS
T ss_pred             ccCCceEEEEEEeCCHHHHHHHHHHccCcEEEEC-C--CCC--EEEEEeCCcceeecccCCcccccceeec------CCC
Confidence            3567999999999999999999999999998763 1  222  34455443321111        111110      011


Q ss_pred             CCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccC-CCceEEEEEECCCCCEEEEEeCC
Q 022871           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK-GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        91 ~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~-~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .+. |++|.|+|+++++++|+++|+++..++.+.+ +|  ..++|+||+|+.|||++..
T Consensus        90 ~g~-~l~f~v~dld~~~~~l~~~G~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           90 TTP-VVTVDVESIESALERIESLGGKTVTGRTPVGNMG--FAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CSC-EEEEECSCHHHHHHHHHHTTCEEEEEEEEETTTE--EEEEEECTTSCEEEEEEEC
T ss_pred             CeE-EEEEEcCCHHHHHHHHHHcCCeEecCCeecCCCE--EEEEEECCCCCEEEEEecC
Confidence            344 9999999999999999999999887776666 33  4589999999999999865

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.71  E-value=8.2e-17  Score=118.63  Aligned_cols=116  Identities=16%  Similarity=0.226  Sum_probs=80.8

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d  232 (291)
                      .+.|+.|.|+|++++.+||++ |||++..... ..+.+..+...  +   ...+.+....+.  .....+.+|++|.|+|
T Consensus         6 ~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~-~~~~~~~~~~~--~---~~~l~l~~~~~~--~~~~~~~~~l~f~v~d   76 (128)
T 3g12_A            6 LITSITINTSHLQGMLGFYRI-IGFQFTASKV-DKGSEVHRAVH--N---GVEFSLYSIQNP--QRSQIPSLQLGFQITD   76 (128)
T ss_dssp             EEEEEEEEESCHHHHHHHHHH-HTCCCEEC------CCEEEEEE--T---TEEEEEEECCCC--SSCCCCSEEEEEEESC
T ss_pred             eEEEEEEEcCCHHHHHHHHHH-CCCEEecccC-CCCCEEEEEeC--C---CeEEEEEECCCC--cCCCCCceEEEEEeCC
Confidence            578999999999999999999 9999765421 11123333211  1   234555322211  1223356889999999


Q ss_pred             hhhhHHHHHHHHHHhCCe-eecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          233 VYKSAEVVNLVTQELGGK-ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~-~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ++++++++    +++|++ +..+|...++ |.+ ++|+|||||+|||.+..+
T Consensus        77 vd~~~~~l----~~~G~~~~~~~p~~~~~-G~~-~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           77 LEKTVQEL----VKIPGAMCILDPTDMPD-GKK-AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             HHHHHHHH----TTSTTCEEEEEEEECC--CEE-EEEECTTCCEEEEEC---
T ss_pred             HHHHHHHH----HHCCCceeccCceeCCC-ccE-EEEECCCCCEEEEEEecc
Confidence            99999999    999999 8888877776 334 999999999999998765

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.71  E-value=4.3e-17  Score=123.52  Aligned_cols=120  Identities=22%  Similarity=0.285  Sum_probs=87.9

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC-----CCcccCCCCe
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-----VTSYDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~g~   93 (291)
                      ||+++++|+.|.|+|++++.+||+++|||++..+.    +  ..+++..+.  ..  +.+.....     ..+...+.+.
T Consensus         1 MM~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~--~~~~~~~~~--~~--l~l~~~~~~~~~~~~~~~~~~~~   70 (150)
T 3bqx_A            1 MSLQQVAVITLGIGDLEASARFYGEGFGWAPVFRN----P--EIIFYQMNG--FV--LATWLVQNLQEDVGVAVTSRPGS   70 (150)
T ss_dssp             --CCCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----S--SEEEEECSS--SE--EEEEEHHHHHHHHSSCCCSSCCS
T ss_pred             CCccceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----C--CEEEEEcCC--EE--EEEEeccccccccCCCCCCCCCe
Confidence            56789999999999999999999999999987653    1  245555432  22  33322110     0011124577


Q ss_pred             eEEEEEe---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           94 GHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .|++|.|   +|+++++++|+++|+++..++...++|.+ .++|+||+|+.|||++...
T Consensus        71 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           71 MALAHNVRAETEVAPLMERLVAAGGQLLRPADAPPHGGL-RGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             CEEEEECSSGGGHHHHHHHHHHTTCEEEEEEECCTTSSE-EEEEECTTCCEEEEEECTT
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCEEecCCcccCCCCE-EEEEECCCCCEEEEEeCCC
Confidence            8999999   89999999999999998877766666654 5899999999999998753

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.71  E-value=5.9e-17  Score=121.90  Aligned_cols=119  Identities=24%  Similarity=0.260  Sum_probs=83.9

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      ++.|.|+|++++.+||+++|||++......++..+.+..++      .  +.+...... . ....+..|++|.|+|+++
T Consensus         9 ~i~l~v~Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~------~--~~l~~~~~~-~-~~~~~~~hl~f~V~d~d~   78 (144)
T 3r6a_A            9 LSRLYVADLNPALEFYEELLETPVAMRFEIPQTGVELAQIS------T--ILLIAGSEE-A-LKPFRNTQATFLVDSLDK   78 (144)
T ss_dssp             EEEEEESCHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEET------T--EEEEESCHH-H-HGGGGGCCEEEEESCHHH
T ss_pred             EEEEEECCHHHHHHHHHHhcCCEEEEEeccCCccEEEEEec------c--EEEecCCcc-c-CCCCcceEEEEEeCCHHH
Confidence            38899999999999999999999776544333334444333      1  333332211 1 122355899999999999


Q ss_pred             hHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh---hhhhhhc
Q 022871          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED---FLKEIQS  290 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~---~~~~~~~  290 (291)
                      +++++    +++|+++..+|...++  ++.+|++||+||.|||++...   ....|||
T Consensus        79 ~~~~l----~~~G~~v~~~p~~~~~--G~~~~~~DPdG~~iel~~~~~~~a~~~~~~~  130 (144)
T 3r6a_A           79 FKTFL----EENGAEIIRGPSKVPT--GRNMTVRHSDGSVIEYVEHSKIEAENLYFQS  130 (144)
T ss_dssp             HHHHH----HHTTCEEEEEEEEETT--EEEEEEECTTSCEEEEEEECC----------
T ss_pred             HHHHH----HHcCCEEecCCccCCC--ceEEEEECCCCCEEEEEEcCCcchhhhhhhc
Confidence            99999    9999999888887777  388999999999999999543   4444544

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.71  E-value=8.4e-17  Score=116.67  Aligned_cols=114  Identities=18%  Similarity=0.088  Sum_probs=82.6

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++|||++....    ..+..  +..++    ..+.+...........+ ...|++|.|+
T Consensus         4 m~i~~v~l~v~D~~~a~~FY~~~lG~~~~~~~----~~~~~--~~~~~----~~l~l~~~~~~~~~~~~-~~~~~~~~v~   72 (118)
T 2i7r_A            4 MNLNQLDIIVSNVPQVCADLEHILDKKADYAN----DGFAQ--FTIGS----HCLMLSQNHLVPLENFQ-SGIIIHIEVE   72 (118)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEE----TTEEE--EEETT----EEEEEESSCSSSCCCCC-SCEEEEEECS
T ss_pred             ceeeEEEEEeCCHHHHHHHHHHHhCCeeEEeC----CCEEE--EEeCC----eEEEEEcCCCCCcccCC-CeEEEEEEEC
Confidence            57899999999999999999999999976432    12322  33221    23333221100101122 3358999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |++++++++    +++|+++..+|...++ +.+.+|++||+|+.|||++.
T Consensus        73 d~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           73 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHH----HHCCCceecCCccccC-ccEEEEEECCCccEEEEEec
Confidence            999999999    9999999888877776 35889999999999999874

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=99.71  E-value=6.9e-16  Score=122.38  Aligned_cols=208  Identities=12%  Similarity=0.053  Sum_probs=131.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE---EEEe
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF---AIAT  100 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i---~~~v  100 (291)
                      +.+.+|.|+|.+++++||+++|||++..+..      ..+.++.+.....++++-.+....   ....|+.|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~~~~L~lEEsp~~~~---~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTGLEKLVLEEAPSMRT---RKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTCCEEEEEEECCTTTC---BCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCCcceEEEEeCCCccc---ccccccceeeeEEEEc
Confidence            5679999999999999999999999988765      356777644444455554322111   223466666   5999


Q ss_pred             CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC----------------------CCCceeEE
Q 022871          101 EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT----------------------PEPLCQVM  158 (291)
Q Consensus       101 ~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~----------------------~~~~~hv~  158 (291)
                      ++-.++.+-|.. +..+... ... +.++ .+|+.||+|+.|++....+.                      ...+ ||.
T Consensus        82 p~~~el~~lL~~-~~~~~~~-~~g-dhgy-A~yl~dPEGn~ieiyae~d~~~l~~v~~~~~l~~~~~~~gLs~fti-~I~  156 (244)
T 3e0r_A           82 ENPLEIEGILSK-TDSIHRL-YKG-QNGY-AFEIFSPEDDLILIHAEDDIASLVEVGEKPEFQTDLASISLSKFEI-SME  156 (244)
T ss_dssp             SSHHHHHHHHTT-CSCCSEE-EEC-SSSE-EEEEECTTCCEEEEECCSCGGGCEECSSCCCCCCCCSCCCCSSEEE-EEE
T ss_pred             CCHHHHHHHHhc-ccccccc-ccc-CCcE-EEEEECCCCCeEEEEEcCCHHHhhcccchhhccccccccCCCCcEE-EEE
Confidence            998776666555 5443210 111 2233 48899999999999976531                      1136 999


Q ss_pred             eeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhHH
Q 022871          159 LRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSAE  238 (291)
Q Consensus       159 l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~~  238 (291)
                      |+|+|.+++  ||.+ +|+.           ..+.|....+.    .+..       +...--++-.+.|.| + +..++
T Consensus       157 LnV~d~~~s--Fy~~-~~~~-----------~~~~F~~a~G~----dl~~-------~~~~t~gLe~l~~~v-~-~~dl~  209 (244)
T 3e0r_A          157 LHLPTDIES--FLES-SEIG-----------ASLDFIPAQGQ----DLTV-------DNTVTWDLSMLKFLV-N-ELDIA  209 (244)
T ss_dssp             EEECTTCCC--SCCH-HHHT-----------TTEEEEECCCT----TTTC-------CTTSBSSEEEEEEEE-S-SCCHH
T ss_pred             EEcCchHHH--Hhhc-cCCc-----------ccEEEEcccCC----CCCC-------CCCCccCceEEEEEe-C-HHHHH
Confidence            999999998  9986 4441           12333321110    0000       001223777888888 4 44444


Q ss_pred             HHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          239 VVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       239 ~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      .+..+|++.|..+.   +     ..+.+.+.||.|+.|+|.+
T Consensus       210 ~l~~~L~~~g~~id---k-----k~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          210 SLRQKFESTEYFIP---K-----SEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             HHHHHTTTSCEECC---T-----TCCEEEEECTTSCEEEEEE
T ss_pred             HHHHHHHhCCceEc---c-----cCCEEEEECCCCCEEEEEE
Confidence            45444487776331   1     1378999999999999975

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.71  E-value=1.2e-16  Score=120.25  Aligned_cols=117  Identities=15%  Similarity=0.183  Sum_probs=87.1

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcc-cCCCCeeEEEEE
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY-DIGTGFGHFAIA   99 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~i~~~   99 (291)
                      ++++.|+.|.|+|++++.+||+++|||++..+.+  .    ..++..++ ..  .+.+.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~-~~--~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESSP--T----FSLFVLAN-GM--KLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEET--T----EEEEECTT-SC--EEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCCC--C----eEEEEcCC-Cc--EEEEEeCCCCCCccCCCCCceEEEEE
Confidence            5599999999999999999999999999876542  1    34455443 22  2333332222111 233578999999


Q ss_pred             eC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+   |+++++++|+++|+++..++...++|  ..++|+||+|+.|||++..
T Consensus        94 v~d~~dv~~~~~~l~~~G~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGWKASGVAMLQQPAKMEFG--YTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCCCSCCEEETTE--EEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHHHHCCCeEecCceecCCc--eEEEEECCCCCEEEEEecC
Confidence            97   58999999999999988887776665  4589999999999999753

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.71  E-value=5e-16  Score=116.01  Aligned_cols=122  Identities=17%  Similarity=0.300  Sum_probs=86.5

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |.....||.|.|+|++++++||+++|||++..+... .+.+..+++..++..  +.+++.......+...+.+..|++|.
T Consensus         8 m~~~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~~--~~l~l~~~~~~~~~~~~~~~~hi~~~   84 (139)
T 1twu_A            8 FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHAD--YHLEFTQYEGGSTAPVPHPDSLLVFY   84 (139)
T ss_dssp             CBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSSS--EEEEEEEETTCCCCCCCCTTCEEEEE
T ss_pred             CCcceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCCc--eEEEEeecCCCCCCCCCCCccEEEEE
Confidence            345668899999999999999999999999876432 233456666654333  23444332222223345578899999


Q ss_pred             eCCH---HHHHHHHHHcCCeEec--CCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TEDV---YKLVENIRAKGGNVTR--EPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~---~~~~~~l~~~G~~~~~--~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+|+   ++++++|+++|+.+..  .+.....|    .||+||+|++|||++..
T Consensus        85 v~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g----~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           85 VPNAVELAAITSKLKHMGYQEVESENPYWSNGG----VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEECCSSHHHHSSE----EEEECTTCCEEEEESSC
T ss_pred             eCCcchHHHHHHHHHHcCCcCcCCCCcccCCCC----eEEECCCCCEEEEEEcC
Confidence            9999   9999999999999873  32222222    25999999999999864

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.71  E-value=6.9e-16  Score=114.63  Aligned_cols=113  Identities=22%  Similarity=0.333  Sum_probs=84.8

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |+++++|+.|.|+|++++.+||+++|||++..+..  .    ..++..++  .  .+.+......  .....+..|++|.
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~----~~~~~~~~--~--~l~l~~~~~~--~~~~~~~~h~~~~   68 (135)
T 1nki_A            1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q----GAYLELGS--L--WLCLSREPQY--GGPAADYTHYAFG   68 (135)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T----EEEEEETT--E--EEEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCceEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C----ceEEecCC--E--EEEEEeCCCC--CCCCCCcceEEEE
Confidence            58899999999999999999999999999876542  1    24455443  2  2333322111  1234478899999


Q ss_pred             eC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+  |+++++++|+++|+++..++..  + .. .++++||+||.|||++..
T Consensus        69 v~~~d~~~~~~~l~~~G~~~~~~~~~--~-~~-~~~~~DPdG~~iel~~~~  115 (135)
T 1nki_A           69 IAAADFARFAAQLRAHGVREWKQNRS--E-GD-SFYFLDPDGHRLEAHVGD  115 (135)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCCS--S-SC-EEEEECTTCCEEEEESCC
T ss_pred             ccHHHHHHHHHHHHHCCCceecCCCC--C-eE-EEEEECCCCCEEEEEECC
Confidence            97  9999999999999998876543  2 33 488999999999999765

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.70  E-value=5.8e-17  Score=124.22  Aligned_cols=121  Identities=19%  Similarity=0.253  Sum_probs=86.6

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC-C-----CCcccCCCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY-G-----VTSYDIGTG   92 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~g   92 (291)
                      +++.+++|+.|.|+|++++++||+++|||++..+...     ...++..++  ..+.+...... .     ..+...+.|
T Consensus         4 ~~i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~-----~~~~~~~g~--~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            4 KPPSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG-----QLVFFKCGR--QMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CCCSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT-----TEEEEEETT--EEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC-----cEEEEeCCC--EEEEEEecCCccCccccCCCCcCCCcc
Confidence            5689999999999999999999999999999876432     234555443  22222111111 1     111122346


Q ss_pred             eeEEEEEe---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           93 FGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        93 ~~~i~~~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +.|++|.|   +|+++++++|+++|+++...+.. .+|.. .++|+||+|++|||++..
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l~~~G~~~~~~~~~-~~g~~-~~~~~DPdG~~iel~~~~  133 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRFEALEIPVEHYHRW-PNGSY-SVYIRDPAGNSVEVGEGK  133 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHHHTTTCCCCEEEEC-TTSCE-EEEEECTTCCEEEEEEGG
T ss_pred             eeEEEEEeCCHHHHHHHHHHHHHCCCEEeccccc-cCCcE-EEEEECCCCCEEEEEeCC
Confidence            79999999   89999999999999998754332 33443 589999999999999976

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.70  E-value=7.3e-16  Score=114.77  Aligned_cols=121  Identities=19%  Similarity=0.200  Sum_probs=86.4

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHH
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVY  104 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~  104 (291)
                      .++.|.|+|++++++||+++|||++..+...+ +....+.+..++  ..+.+....+........+.++.|++|.|+|++
T Consensus         4 ~~i~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-g~~~~~~l~~~~--~~l~l~~~~~~~~~~~~~~~~~~~~~~~v~dv~   80 (137)
T 3itw_A            4 MVVELAYTDPDRAVDWLVRVFGFRLLLRQPAI-GTIRHADLDTGG--GIVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVD   80 (137)
T ss_dssp             CEEEEEESCHHHHHHHHHHHHCCEEEEEESSS-SSCSEEEEECSS--SEEEEEETTCCSSCEECCCCCCCEEEEEESCHH
T ss_pred             EEEEEEECCHHHHHHHHHHccCCEEEEEecCC-CcEEEEEEecCC--eEEEEEecCCCcCccCCCCCcEEEEEEEeCCHH
Confidence            57899999999999999999999998765433 333345555443  223222111111111112223349999999999


Q ss_pred             HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          105 KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       105 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +++++|+++|+++..++...++|.+ .++|+||+||.|+|++...
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  124 (137)
T 3itw_A           81 EHFMRSTAAGADIVQPLQDKPWGLR-QYLVRDLEGHLWEFTRHLR  124 (137)
T ss_dssp             HHHHHHHHTTCEEEEEEEEETTTEE-EEEEECSSSCEEEEEECC-
T ss_pred             HHHHHHHHcCCeeccCccccCCCcE-EEEEECCCCCEEEEEEEcC
Confidence            9999999999999888777777654 5899999999999999764

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.70  E-value=1.8e-16  Score=118.78  Aligned_cols=113  Identities=14%  Similarity=0.236  Sum_probs=84.5

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..++.|+.|.|.|++++.+||+++|||++.....  +.....+.+.  .  ....+.+....      ...+..|++|.|
T Consensus        26 i~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~--~~~~~~~~~~--~--~~~~l~l~~~~------~~~~~~h~~~~v   93 (141)
T 3ghj_A           26 IKGLFEVAVKVKNLEKSSQFYTEILGFEAGLLDS--ARRWNFLWVS--G--RAGMVVLQEEK------ENWQQQHFSFRV   93 (141)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHTSCCEEEEEET--TTTEEEEEET--T--TTEEEEEEECC------SSCCCCEEEEEE
T ss_pred             eceecEEEEEeCCHHHHHHHHHHhcCCEEEEecC--CCcEEEEEec--C--CCcEEEEeccC------CCCCCceEEEEE
Confidence            3579999999999999999999999999876542  2223333333  2  24566665431      123568999999


Q ss_pred             c--chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          231 D--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +  |++++++++    +++|+++. .|...++++++.+||+|||||.|||++
T Consensus        94 ~~~dld~~~~~l----~~~G~~~~-~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A           94 EKSEIEPLKKAL----ESKGVSVH-GPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CGGGHHHHHHHH----HHTTCCCE-EEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             eHHHHHHHHHHH----HHCCCeEe-CCcccCCCCceEEEEECCCCCEEEEEE
Confidence            7  888888888    99999987 444444434689999999999999985

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.70  E-value=7e-16  Score=115.50  Aligned_cols=115  Identities=22%  Similarity=0.359  Sum_probs=85.2

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC-CCcccCCCCeeEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG-VTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~i~~   98 (291)
                      |+++++|+.|.|+|++++.+||+++|||++..+.+  .    ..++..++  ..  +.+..... ........+..|++|
T Consensus         1 Mi~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~----~~~~~~~~--~~--l~l~~~~~~~~~~~~~~~~~hi~~   70 (141)
T 1npb_A            1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T----GAYLTCGD--LW--VCLSYDEARQYVPPQESDYTHYAF   70 (141)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T----EEEEEETT--EE--EEEEECTTCCCCCGGGSCSCEEEE
T ss_pred             CCceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C----cEEEEECC--EE--EEEEECCCCCCCCCCCCCceEEEE
Confidence            57899999999999999999999999999977642  1    24555443  22  33332211 111123447889999


Q ss_pred             EeC--CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATE--DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~--d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+  |+++++++|+++|+++...+..   +.. .++|+||+|+.|||++..
T Consensus        71 ~v~~~d~~~~~~~l~~~G~~~~~~~~~---~~~-~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           71 TVAEEDFEPLSQRLEQAGVTIWKQNKS---EGA-SFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             ECCHHHHHHHHHHHHHTTCCEEECCCS---SSE-EEEEECTTCCEEEEEECC
T ss_pred             EeCHHHHHHHHHHHHHCCCeEeccCCC---cee-EEEEECCCCCEEEEEECc
Confidence            996  9999999999999998776542   233 588999999999999875

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.70  E-value=1.1e-16  Score=121.38  Aligned_cols=119  Identities=17%  Similarity=0.215  Sum_probs=85.2

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc---ceeccCcceeEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h~~~  228 (291)
                      .++.|+.|.|.|++++.+||+++|||++....   + ++..+  ..+    ...+.+......   .......+..|++|
T Consensus        22 ~~l~hv~l~v~D~~~a~~FY~~vLG~~~~~~~---~-~~~~l--~~~----~~~l~l~~~~~~~~~~~~~~~~g~~hi~f   91 (152)
T 3huh_A           22 DRIDHLVLTVSDISTTIRFYEEVLGFSAVTFK---Q-NRKAL--IFG----AQKINLHQQEMEFEPKASRPTPGSADLCF   91 (152)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEET---T-TEEEE--EET----TEEEEEEETTBCCSSCCSSCCTTCCEEEE
T ss_pred             ceeeEEEEEeCCHHHHHHHHHhcCCCEEEEcc---C-CeEEE--EeC----CeEEEEeccCCcCCCcCcCCCCCccEEEE
Confidence            46899999999999999999999999987652   1 22222  322    244555432211   11123457789999


Q ss_pred             Eec-chhhhHHHHHHHHHHhCCeeecCCcccCCCC--ceEEEEECCCCCeEEEEechhh
Q 022871          229 STD-DVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       229 ~v~-di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      .+. |++++++++    +++|+++..+|...++..  .+.+||+|||||+|||++....
T Consensus        92 ~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A           92 ITSTPINDVVSEI----LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             EESSCHHHHHHHH----HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             EecCCHHHHHHHH----HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            987 999999999    999999888776544322  3889999999999999987654

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.70  E-value=2.1e-16  Score=116.45  Aligned_cols=119  Identities=17%  Similarity=0.175  Sum_probs=81.3

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      +..+|+|+.|.|+|++++++||++ |||++...... .+.  ..++...+ ...+.  +.....  ......+..+++|.
T Consensus         3 ~~~~i~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~-~~~--~~~~~~~~-~~~l~--l~~~~~--~~~~~~~~~~l~f~   73 (128)
T 3g12_A            3 LSLLITSITINTSHLQGMLGFYRI-IGFQFTASKVD-KGS--EVHRAVHN-GVEFS--LYSIQN--PQRSQIPSLQLGFQ   73 (128)
T ss_dssp             -CEEEEEEEEEESCHHHHHHHHHH-HTCCCEEC------C--CEEEEEET-TEEEE--EEECCC--CSSCCCCSEEEEEE
T ss_pred             ccceEEEEEEEcCCHHHHHHHHHH-CCCEEecccCC-CCC--EEEEEeCC-CeEEE--EEECCC--CcCCCCCceEEEEE
Confidence            456899999999999999999999 99998765211 111  23333111 22222  222111  11222345789999


Q ss_pred             eCCHHHHHHHHHHcCCe-EecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          100 TEDVYKLVENIRAKGGN-VTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~d~~~~~~~l~~~G~~-~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      |+|+++++++|+++|++ +..+|...++|..  ++|+|||||+|+|.+..+
T Consensus        74 v~dvd~~~~~l~~~G~~~~~~~p~~~~~G~~--~~~~DPdGn~iel~~~~~  122 (128)
T 3g12_A           74 ITDLEKTVQELVKIPGAMCILDPTDMPDGKK--AIVLDPDGHSIELCELEG  122 (128)
T ss_dssp             ESCHHHHHHHHTTSTTCEEEEEEEECC-CEE--EEEECTTCCEEEEEC---
T ss_pred             eCCHHHHHHHHHHCCCceeccCceeCCCccE--EEEECCCCCEEEEEEecc
Confidence            99999999999999999 7777777777653  889999999999998764

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.69  E-value=2.7e-16  Score=117.45  Aligned_cols=116  Identities=19%  Similarity=0.247  Sum_probs=82.6

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeE---EEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      ++.|+.|.|+|++++.+||+++|||++......  ..+..   .++..+    +..+.+......   + ..+..|++|.
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~--~~~~~~~~~~~~~g----~~~l~l~~~~~~---~-~~~~~h~~~~   73 (139)
T 1r9c_A            4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDT--EQFSLSREKFFLIG----DIWVAIMQGEKL---A-ERSYNHIAFK   73 (139)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGG--STTCCSCEEEEEET----TEEEEEEECCCC---S-SCCSCEEEEE
T ss_pred             eEEEEEEEeCCHHHHHHHHHHhhCCEEeecCCC--ccccccceEEEEEC----CEEEEEEeCCCC---C-CCCeeEEEEE
Confidence            589999999999999999999999998754321  11110   022221    245666542211   1 3577899999


Q ss_pred             ec--chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          230 TD--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |+  |++++++++    +++|+++..+|...++ +++.+|++||+||.|||++...
T Consensus        74 v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (139)
T 1r9c_A           74 IDDADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGTL  124 (139)
T ss_dssp             CCGGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCCH
T ss_pred             cCHHHHHHHHHHH----HHCCCcccCCcccCCC-CeEEEEEECCCCCEEEEEeCCh
Confidence            99  899999998    9999998877666554 3589999999999999998553

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.69  E-value=2.7e-16  Score=116.41  Aligned_cols=117  Identities=16%  Similarity=0.250  Sum_probs=84.1

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeE---EEecccCCCceeEEEeeeecCcceeccCcceeEEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTL---AMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~  228 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....  +..+..   .++..+    ...+.+....+.    ..++..|++|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~~~~~~~~~~~~~~~----~~~l~l~~~~~~----~~~~~~h~~~   72 (133)
T 2p7o_A            3 SGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSG--DKTFSLSKEKFFLIA----GLWICIMEGDSL----QERTYNHIAF   72 (133)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHHCCEECC-------CCCSSCEEEEEET----TEEEEEEECSSC----CCCCSCEEEE
T ss_pred             ceEEEEEEEcCCHHHHHHHHHHhcCCEEeeecC--CcccccCCceEEEeC----CEEEEEecCCCC----CCCCeeEEEE
Confidence            468999999999999999999999999765432  111110   022221    245666542211    1457789999


Q ss_pred             Ee--cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          229 ST--DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v--~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      .|  +|++++++++    +++|+++..+|...++ +++.+|++||+||.|||++...
T Consensus        73 ~v~~~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           73 QIQSEEVDEYTERI----KALGVEMKPERPRVQG-EGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             ECCGGGHHHHHHHH----HHHTCCEECCCCCCTT-CCCEEEEECSSSCEEEEECSSC
T ss_pred             EcCHHHHHHHHHHH----HHCCCcccCCCccCCC-CeeEEEEECCCCCEEEEEcCCh
Confidence            99  4899999998    9999999888776554 3589999999999999998653

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.69  E-value=2.5e-16  Score=117.51  Aligned_cols=120  Identities=18%  Similarity=0.152  Sum_probs=86.6

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccC------CCCcccCCCCe
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY------GVTSYDIGTGF   93 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~g~   93 (291)
                      |++++.|+.|.|+|++++++||++ |||++..+.+.  ..  ...+..++ ...  +.+....      .......+.+.
T Consensus         1 M~~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~~--~~--~~~~~~~~-~~~--l~l~~~~~~~~~~~~~~~~~~~~~   72 (138)
T 2a4x_A            1 MSARISLFAVVVEDMAKSLEFYRK-LGVEIPAEADS--AP--HTEAVLDG-GIR--LAWDTVETVRSYDPEWQAPTGGHR   72 (138)
T ss_dssp             -CCEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGGG--CS--EEEEECTT-SCE--EEEEEHHHHHHHCTTCCCCBSSCS
T ss_pred             CcceeeEEEEEECCHHHHHHHHHH-cCCcEEecCCC--Cc--eEEEEcCC-CeE--EEEecCccchhhCcccCCCCCCCe
Confidence            467999999999999999999998 99998654321  11  23344322 222  3332211      11111233578


Q ss_pred             eEEEEEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           94 GHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|++|.|+   |+++++++|+++|+++..++...++|.+ .++|+||+|+.|||++..
T Consensus        73 ~~l~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           73 FAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             EEEEEECSSHHHHHHHHHHHHHTTCCEEEEEEEETTTEE-EEEEECTTCCEEEEEEEC
T ss_pred             EEEEEEeCCHHHHHHHHHHHHHCCCceeeCCcccCCCcE-EEEEECCCCCEEEEEeCC
Confidence            89999999   9999999999999998877777776644 589999999999999876

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.69  E-value=1e-15  Score=113.58  Aligned_cols=118  Identities=19%  Similarity=0.255  Sum_probs=83.6

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ..++|+||.|.|+|++++.+||+++|||++....+      ....+..+..  .+.+....... .+  ...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~------~~~~~~~~g~--~~~l~~~~~~~-~~--~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP------DRITLDFFGD--QLVCHLSDRWD-RE--VSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETTE--EEEEEECSCSC-SS--CCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC------CcEEEEEeCC--EEEEEEcCccc-cc--CCCCCCeEEEE
Confidence            35789999999999999999999999999965532      1344443222  23333322111 11  23467899998


Q ss_pred             eC---CHHHHHHHHHHcCCeEecCCccc---CCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TE---DVYKLVENIRAKGGNVTREPGPL---KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~---~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +.   |+++++++|+++|+++...|...   ..+....++|+||+||.|||.+..
T Consensus        75 ~~~~~d~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~  129 (135)
T 3rri_A           75 FRDKKHFDNLYKLAKQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYF  129 (135)
T ss_dssp             CSSHHHHHHHHHHHHHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEES
T ss_pred             EcChHhHHHHHHHHHHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEEC
Confidence            85   59999999999999987665543   123334589999999999999865

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.69  E-value=2.6e-16  Score=118.39  Aligned_cols=117  Identities=17%  Similarity=0.160  Sum_probs=85.8

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCccee-ccCcceeEEEEE
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY-TKGNAYAQVAIS  229 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~-~~~~~~~h~~~~  229 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....    ..+..+.+.  +   ...+.|.......+. ..+.+..|++|.
T Consensus        23 m~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~----~~~~~~~~~--~---~~~l~l~~~~~~~~~~~~~~~~~hl~f~   93 (144)
T 2kjz_A           23 MTHPDFTILYVDNPPASTQFYKALLGVDPVESS----PTFSLFVLA--N---GMKLGLWSRHTVEPKASVTGGGGELAFR   93 (144)
T ss_dssp             CCCCCEEEEEESCHHHHHHHHHHHHTCCCSEEE----TTEEEEECT--T---SCEEEEEETTSCSSCCCCSSSSCEEEEE
T ss_pred             cCceeEEEEEeCCHHHHHHHHHHccCCEeccCC----CCeEEEEcC--C---CcEEEEEeCCCCCCccCCCCCceEEEEE
Confidence            358999999999999999999999999976543    123333222  2   245655443221111 223578899999


Q ss_pred             ecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          230 TDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      |+|   ++++++++    +++|+++..+|...++  ++.+||+||+|+.|||+++.
T Consensus        94 v~d~~dv~~~~~~l----~~~G~~~~~~~~~~~~--g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A           94 VENDAQVDETFAGW----KASGVAMLQQPAKMEF--GYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCCCSCCEEETT--EEEEEECCTTCCEEEEEEEC
T ss_pred             eCCHHHHHHHHHHH----HHCCCeEecCceecCC--ceEEEEECCCCCEEEEEecC
Confidence            974   67777777    9999999888877766  38899999999999999864

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.68  E-value=2.5e-16  Score=115.51  Aligned_cols=113  Identities=12%  Similarity=0.142  Sum_probs=83.2

Q ss_pred             CceeEEeee--CCccccHHHHHhhhCCeeeeeeccC-CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          153 PLCQVMLRV--GDLGRSIKFYEKALGMKLLRTVDKP-EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       153 ~~~hv~l~v--~D~~~~~~Fy~~~lG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      ++.|+.|.|  .|++++.+||+++|||++....... .....+  +..+    ...+.+....+.    ...+..|++|.
T Consensus        10 ~i~hv~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~--~~~~----~~~l~l~~~~~~----~~~~~~~~~f~   79 (126)
T 2qqz_A           10 GIDHVQVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCW--FKCG----NQEIHIGVEQNF----NPAKRAHPAFY   79 (126)
T ss_dssp             EEEEEEEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEE--EEET----TEEEEEEECTTC----CCCSSSCEEEE
T ss_pred             eeeeEEEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceE--EEeC----CEEEEEEecCCC----CCCCceEEEEE
Confidence            589999999  8999999999999999987543211 011122  3322    234555543211    12467899999


Q ss_pred             ecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      |+|++++++++    +++|+++..+|. .+  +.+.+|++||+||.|||+++.
T Consensus        80 v~d~~~~~~~l----~~~G~~~~~~~~-~~--g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           80 VLKIDEFKQEL----IKQGIEVIDDHA-RP--DVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             ETTHHHHHHHH----HHTTCCCEEECS-ST--TEEEEEEECTTSCEEEEEEEC
T ss_pred             cCCHHHHHHHH----HHcCCCccCCCC-CC--CeeEEEEECCCCCEEEEEeCC
Confidence            99999999999    999999887773 22  368999999999999999863

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.68  E-value=1.7e-16  Score=120.21  Aligned_cols=117  Identities=20%  Similarity=0.197  Sum_probs=87.4

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc-----eeccCcceeEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT-----EYTKGNAYAQV  226 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-----~~~~~~~~~h~  226 (291)
                      .++.|+.|.|+|++++.+||+++|||++....    +.+  .++..+    ...+.|.......     +...+.+..|+
T Consensus         4 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~----~~~--~~~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~l   73 (150)
T 3bqx_A            4 QQVAVITLGIGDLEASARFYGEGFGWAPVFRN----PEI--IFYQMN----GFVLATWLVQNLQEDVGVAVTSRPGSMAL   73 (150)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHTSCCCCSEEC----SSE--EEEECS----SSEEEEEEHHHHHHHHSSCCCSSCCSCEE
T ss_pred             cceEEEEEEcCCHHHHHHHHHHhcCCEeecCC----CCE--EEEEcC----CEEEEEEeccccccccCCCCCCCCCeEEE
Confidence            46899999999999999999999999976542    222  233322    3456665432110     00114567899


Q ss_pred             EEEe---cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          227 AIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +|.|   +|++++++++    +++|+++..+|...+++ .+.+|++||+||.|||++...
T Consensus        74 ~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~g-~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           74 AHNVRAETEVAPLMERL----VAAGGQLLRPADAPPHG-GLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             EEECSSGGGHHHHHHHH----HHTTCEEEEEEECCTTS-SEEEEEECTTCCEEEEEECTT
T ss_pred             EEEeCCHHHHHHHHHHH----HHCCCEEecCCcccCCC-CEEEEEECCCCCEEEEEeCCC
Confidence            9999   8888888888    99999998888777663 589999999999999998754

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.68  E-value=2.5e-16  Score=117.49  Aligned_cols=120  Identities=18%  Similarity=0.143  Sum_probs=87.3

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec------CcceeccCcceeE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY------GVTEYTKGNAYAQ  225 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~~~~h  225 (291)
                      .++.|+.|.|+|++++.+||++ |||++.....  +..+..  +..++   ...+.+....      +......+.+..|
T Consensus         3 ~~l~hv~l~v~D~~~a~~FY~~-LG~~~~~~~~--~~~~~~--~~~~~---~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   74 (138)
T 2a4x_A            3 ARISLFAVVVEDMAKSLEFYRK-LGVEIPAEAD--SAPHTE--AVLDG---GIRLAWDTVETVRSYDPEWQAPTGGHRFA   74 (138)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHT-TTCCCCGGGG--GCSEEE--EECTT---SCEEEEEEHHHHHHHCTTCCCCBSSCSEE
T ss_pred             ceeeEEEEEECCHHHHHHHHHH-cCCcEEecCC--CCceEE--EEcCC---CeEEEEecCccchhhCcccCCCCCCCeEE
Confidence            4689999999999999999998 9999765432  122222  22211   3455554321      1101123457889


Q ss_pred             EEEEec---chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       226 ~~~~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      ++|.|+   |++++++++    +++|+++..+|...++ +.+.+||+||+||.|||++..++
T Consensus        75 l~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  131 (138)
T 2a4x_A           75 IAFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAPLPL  131 (138)
T ss_dssp             EEEECSSHHHHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEECTTCCEEEEEEECTT
T ss_pred             EEEEeCCHHHHHHHHHHH----HHCCCceeeCCcccCC-CcEEEEEECCCCCEEEEEeCCcc
Confidence            999999   888888888    9999999888877776 35889999999999999998743

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.68  E-value=3e-16  Score=117.19  Aligned_cols=119  Identities=20%  Similarity=0.341  Sum_probs=83.5

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d  232 (291)
                      ...|+.|.|+|++++.+||+++|||++...... ++.+...+++.+..  ...+++....+..+...+.+..|++|.|+|
T Consensus        11 ~~~~i~l~v~Dl~~s~~FY~~~LG~~~~~~~~~-~~~~~~~~~~~~~~--~~~l~l~~~~~~~~~~~~~~~~hi~~~v~d   87 (139)
T 1twu_A           11 AQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQ-HNGYDGVMFGLPHA--DYHLEFTQYEGGSTAPVPHPDSLLVFYVPN   87 (139)
T ss_dssp             SCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEE-ETTEEEEEEESSSS--SEEEEEEEETTCCCCCCCCTTCEEEEECCC
T ss_pred             ceeEEeeEeCCHHHHHHHHHhcCCcEEEEeccC-CCCeeEEEEecCCC--ceEEEEeecCCCCCCCCCCCccEEEEEeCC
Confidence            457888999999999999999999998754332 22345566654322  345666554332222334567899999999


Q ss_pred             h---hhhHHHHHHHHHHhCCeeec--CCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          233 V---YKSAEVVNLVTQELGGKITR--QPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       233 i---~~~~~~l~~~~~~~G~~~~~--~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +   +++++++    +++|+++..  .|.....  +  .||+|||||+|||+++.
T Consensus        88 ~~~l~~~~~~l----~~~G~~~~~~~~~~~~~~--g--~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           88 AVELAAITSKL----KHMGYQEVESENPYWSNG--G--VTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             HHHHHHHHHHH----HHTTCCEECCSSHHHHSS--E--EEEECTTCCEEEEESSC
T ss_pred             cchHHHHHHHH----HHcCCcCcCCCCcccCCC--C--eEEECCCCCEEEEEEcC
Confidence            8   8888888    999999873  3322222  2  27999999999999864

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.68  E-value=1e-15  Score=115.33  Aligned_cols=120  Identities=18%  Similarity=0.347  Sum_probs=86.1

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHH---HHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC---CCccc-C
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFY---TECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG---VTSYD-I   89 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy---~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~   89 (291)
                      +.+++.++.|+.|.|+|++++.+||   +++|||++..+...  +   ..|+. +.  .  .+.+.....   ..+.. .
T Consensus        14 ~~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~~--~---~~~~~-g~--~--~l~l~~~~~~~~~~~~~~~   83 (146)
T 3ct8_A           14 NLYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWSR--G---KSYKH-GK--T--YLVFVQTEDRFQTPTFHRK   83 (146)
T ss_dssp             CTTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEETT--E---EEEEE-TT--E--EEEEEECCGGGSCSCCCTT
T ss_pred             ccccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecCC--C---ceEec-CC--e--EEEEEEcCCCccccccccc
Confidence            4467899999999999999999999   99999999776431  1   23443 32  2  233333221   11111 2


Q ss_pred             CCCeeEEEEEeC---CHHHHHHHHHHcCCeEec-CCcccCCC-ceEEEEEECCCCCEEEEEe
Q 022871           90 GTGFGHFAIATE---DVYKLVENIRAKGGNVTR-EPGPLKGG-TTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        90 ~~g~~~i~~~v~---d~~~~~~~l~~~G~~~~~-~~~~~~~g-~~~~~~~~dp~G~~iel~~  146 (291)
                      ..|+.|++|.|+   |+++++++|+++|+.+.. .|.....+ ....++|+||+|+.|||++
T Consensus        84 ~~g~~hi~f~v~~~~dv~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~  145 (146)
T 3ct8_A           84 RTGLNHLAFHAASREKVDELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVA  145 (146)
T ss_dssp             SSSCCEEEEECSCHHHHHHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEEC
T ss_pred             CCCceEEEEECCCHHHHHHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEe
Confidence            357899999999   999999999999999876 35443332 2234889999999999986

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.68  E-value=3.2e-16  Score=113.70  Aligned_cols=111  Identities=14%  Similarity=0.124  Sum_probs=82.3

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d  232 (291)
                      .+ |+.|.|+|++++.+||+++|||++...   . +.+  ..+..+. .....+.+....     ...++..|++|.|+|
T Consensus         8 ~i-~v~l~v~d~~~a~~FY~~~lG~~~~~~---~-~~~--~~~~~~~-~~~~~l~l~~~~-----~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            8 RV-VANIATPEPARAQAFYGDILGMPVAMD---H-GWI--VTHASPL-EAHAQVSFAREG-----GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             EE-EEEEECSCGGGGHHHHTTTTCCCEEEE---C-SSE--EEEEEEE-EEEEEEEEESSS-----BTTBCCCSEEEEESC
T ss_pred             EE-EEEEEcCCHHHHHHHHHHhcCCEEEec---C-CEE--EEEecCC-CCcEEEEEEcCC-----CCCCceeEEEEEECC
Confidence            45 999999999999999999999997653   1 112  1222111 112345544321     123456899999999


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      ++++++++    +++|+++..+|...++ +.+.+|++||+||.|||++.
T Consensus        75 ~~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHH----HHCCCccccCCccCCC-ccEEEEEECCCCCEEEEEec
Confidence            99999999    9999999888877776 35899999999999999975

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.68  E-value=7e-16  Score=112.89  Aligned_cols=109  Identities=14%  Similarity=0.103  Sum_probs=82.7

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      ..|+.|.|+|++++.+||+++|||++...    ..++.  .+..+    ...+.+......    ..++..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~lG~~~~~~----~~~~~--~~~~~----~~~l~l~~~~~~----~~~~~~~~~~~v~dv   71 (124)
T 1xrk_A            6 SAVPVLTARDVAEAVEFWTDRLGFSRVFV----EDDFA--GVVRD----DVTLFISAVQDQ----VVPDNTQAWVWVRGL   71 (124)
T ss_dssp             EEEEEEEESCHHHHHHHHHHTTCCEEEEE----CSSEE--EEEET----TEEEEEEECSCT----TTGGGCEEEEEEECH
T ss_pred             ceeEEEEcCCHHHHHHHHHHccCceEEec----CCCEE--EEEEC----CEEEEEEcCCCC----CCCCceEEEEEECCH
Confidence            46899999999999999999999998754    12232  23322    345555443221    123447999999999


Q ss_pred             hhhHHHHHHHHHHh------CC--eeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          234 YKSAEVVNLVTQEL------GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +++++++    +++      |+  ++..+|...++ + +.+|++||+||.|||.+..
T Consensus        72 ~~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           72 DELYAEW----SEVVSTNFRDASGPAMTEIVEQPW-G-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHHHH----TTTSBSCTTTCSSCEECCCEEETT-E-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHH----HHhcccccCCccccccCCceecCC-C-CEEEEECCCCCEEEEEEec
Confidence            9999999    999      99  88888887776 3 8999999999999999864

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.67  E-value=4.2e-16  Score=115.74  Aligned_cols=121  Identities=15%  Similarity=0.143  Sum_probs=81.6

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecc
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDD  232 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~d  232 (291)
                      .-.+..|.|+|++++.+||+++|||++.....    .+..  +..+    ...+.+.........+.+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~----~~~~--l~~~----~~~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS----NYAY--LELS----GCGLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----TEEE--EEET----TEEEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC----CeEE--EEEC----CEEEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            34567899999999999999999999875432    1333  3322    345666554332222223345799999999


Q ss_pred             hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          233 VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       233 i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      ++++++++.++-.+.|+++..+|...++ +.+.++++|||||.|||.+....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPY-GQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTT-SEEEEEEECTTSCEEEEEEECCT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCC-CcEEEEEECCCCCEEEEEEcccc
Confidence            9999999922111345566777777776 45899999999999999987654

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.67  E-value=1e-15  Score=112.34  Aligned_cols=113  Identities=20%  Similarity=0.286  Sum_probs=83.3

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      ..++.|.|+|++++.+||++ |||++...    +..+  ..+..+    ...+.+....+.   ...++..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~----~~~~--~~~~~~----~~~l~l~~~~~~---~~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFR----DAGW--MILQRG----DLMLEFFAHPGL---DPLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEE----CSSE--EEEEET----TEEEEEEECTTC---CGGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEec----CCCE--EEEEeC----CEEEEEEeCCCC---CCCCcceEEEEEECCH
Confidence            46889999999999999998 99998754    1223  333322    345566443221   1124678999999999


Q ss_pred             hhhHHHHHHHHHHhCCee-------ecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          234 YKSAEVVNLVTQELGGKI-------TRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~-------~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                      +++++++    +++|+++       ..+|...++ +.+.+|++||+||.|||++.....
T Consensus        70 ~~~~~~l----~~~G~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~~~  123 (126)
T 1ecs_A           70 AEFYRQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNELLA  123 (126)
T ss_dssp             HHHHHHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECCC--
T ss_pred             HHHHHHH----HHCCCccccccCccccCCcccCc-ccEEEEEECCCCCEEEEecchhhc
Confidence            9999999    9999994       667776666 358999999999999999977644

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.67  E-value=2.2e-15  Score=110.21  Aligned_cols=113  Identities=12%  Similarity=0.063  Sum_probs=83.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      +.....|+.|.|+|++++.+||+++|||++..+.    ..  ..++..++  ..  +.+......    ...+..|++|.
T Consensus         2 ~~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~----~~--~~~~~~~~--~~--l~l~~~~~~----~~~~~~~~~~~   67 (124)
T 1xrk_A            2 AKLTSAVPVLTARDVAEAVEFWTDRLGFSRVFVE----DD--FAGVVRDD--VT--LFISAVQDQ----VVPDNTQAWVW   67 (124)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEC----SS--EEEEEETT--EE--EEEEECSCT----TTGGGCEEEEE
T ss_pred             CcccceeEEEEcCCHHHHHHHHHHccCceEEecC----CC--EEEEEECC--EE--EEEEcCCCC----CCCCceEEEEE
Confidence            3456689999999999999999999999998651    11  34454432  22  333322111    11234699999


Q ss_pred             eCCHHHHHHHHHHc------CC--eEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 TEDVYKLVENIRAK------GG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v~d~~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |+|+++++++|+++      |+  ++..+|...++|  ..++++||+||.|+|.+..
T Consensus        68 v~dv~~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g--~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           68 VRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG--REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             EECHHHHHHHHTTTSBSCTTTCSSCEECCCEEETTE--EEEEEECTTCCEEEEEEC-
T ss_pred             ECCHHHHHHHHHHhcccccCCccccccCCceecCCC--CEEEEECCCCCEEEEEEec
Confidence            99999999999999      99  888888777776  4589999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.67  E-value=1.1e-15  Score=109.85  Aligned_cols=108  Identities=20%  Similarity=0.277  Sum_probs=79.4

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe-
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT-  100 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v-  100 (291)
                      ++++|+.|.|+|++++.+||+++|||++.....   .  ...++..++ .  ..+.+......    ...+..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~---~--~~~~~~~~~-~--~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N--AFAVMRDND-G--FILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T--TEEEEECTT-C--CEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccCC---C--cEEEEEcCC-C--cEEEEEeCCCC----CCCceeEEEEEcC
Confidence            478999999999999999999999999876532   1  235555432 2  23334332211    124688999999 


Q ss_pred             --CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          101 --EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       101 --~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                        +|+++++++|+++|+++.. |...+   ...++++||+||.|||+
T Consensus        70 ~~~d~~~~~~~l~~~G~~~~~-p~~~~---~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRLKEDGFLVEP-PKHAH---AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCC-CEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHHHHCCCEEec-CcCCC---cEEEEEECCCCcEEEEe
Confidence              8899999999999999754 44332   34589999999999986

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.67  E-value=8.7e-16  Score=114.97  Aligned_cols=120  Identities=18%  Similarity=0.094  Sum_probs=82.9

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeec----cCCCCc-ccCCCCeeEE
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY----NYGVTS-YDIGTGFGHF   96 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~g~~~i   96 (291)
                      +++.|+.|.|+|++++.+||+++|||++..+...+  .  ...+..+.  ..+.+....    -....+ ...+.+ .|+
T Consensus         7 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~--~--~~~~~~~~--~~l~l~~~~~~~~~~~~~~~~~~~~~-~~~   79 (141)
T 2rbb_A            7 ADLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRSP--I--FRGLDTGK--SCIGFNAHEAYELMQLAQFSETSGIK-FLL   79 (141)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHCCEECGGGCBT--T--EEEEECSS--SEEEEECTHHHHHTTCGGGCCCBSCC-EEE
T ss_pred             CcccEEEEEECCHHHHHHHHHHhcCCeeecccCCC--c--eEEeecCC--EEEEEcCccccccccccccCCCCCCe-EEE
Confidence            39999999999999999999999999986543211  1  23344332  222221100    000001 112335 499


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           97 AIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +|.|+   |+++++++|+++|+++..+|...++|.+ .++|+||+|+.|||++...
T Consensus        80 ~f~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           80 NFDVDTKEAVDKLVPVAIAAGATLIKAPYETYYHWY-QAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEECSCHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEEC-
T ss_pred             EEEcCCHHHHHHHHHHHHHcCCeEecCccccCCccE-EEEEECCCCCEEEEEEccc
Confidence            99998   5999999999999998877777666544 5899999999999998653

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.66  E-value=2.1e-15  Score=113.61  Aligned_cols=120  Identities=19%  Similarity=0.182  Sum_probs=86.4

Q ss_pred             CCCCCCceeEEeeeCCccccHHHH---HhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecC---cceec-cC
Q 022871          148 GPTPEPLCQVMLRVGDLGRSIKFY---EKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYG---VTEYT-KG  220 (291)
Q Consensus       148 ~~~~~~~~hv~l~v~D~~~~~~Fy---~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~-~~  220 (291)
                      ......+.|+.|.|+|++++.+||   +++|||++.....  ++  . .++. +    ...+.|.....   ..+.. ..
T Consensus        15 ~~~~~~i~hv~l~v~Dl~~a~~FY~~~~~~LG~~~~~~~~--~~--~-~~~~-g----~~~l~l~~~~~~~~~~~~~~~~   84 (146)
T 3ct8_A           15 LYFQGMLHHVEINVDHLEESIAFWDWLLGELGYEDYQSWS--RG--K-SYKH-G----KTYLVFVQTEDRFQTPTFHRKR   84 (146)
T ss_dssp             TTTTTSCCEEEEEESCHHHHHHHHHHHHHHTTCEEEEEET--TE--E-EEEE-T----TEEEEEEECCGGGSCSCCCTTS
T ss_pred             cccccceeEEEEEeCCHHHHHHHHHhhhhhCCCEEEEecC--CC--c-eEec-C----CeEEEEEEcCCCcccccccccC
Confidence            345678999999999999999999   9999999875432  11  1 2232 1    24566655432   11111 23


Q ss_pred             cceeEEEEEec---chhhhHHHHHHHHHHhCCeeec-CCcccCC-CCceEEEEECCCCCeEEEEec
Q 022871          221 NAYAQVAISTD---DVYKSAEVVNLVTQELGGKITR-QPGSIPG-LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       221 ~~~~h~~~~v~---di~~~~~~l~~~~~~~G~~~~~-~p~~~~~-~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      ++..|++|.|+   |++++++++    +++|+++.. .|...++ .+.+.+||+||+||.|||+++
T Consensus        85 ~g~~hi~f~v~~~~dv~~~~~~l----~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A           85 TGLNHLAFHAASREKVDELTQKL----KERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             SSCCEEEEECSCHHHHHHHHHHH----HHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             CCceEEEEECCCHHHHHHHHHHH----HHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            56789999999   888888888    999999887 3554332 235789999999999999863

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.66  E-value=5.4e-16  Score=118.77  Aligned_cols=119  Identities=13%  Similarity=0.181  Sum_probs=84.5

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc--------ceeccCcc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--------TEYTKGNA  222 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--------~~~~~~~~  222 (291)
                      ..++.|+.|.|+|++++.+||+++|||++......   .  ..++..+    ...+.+......        .+...+.+
T Consensus         6 i~~l~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~~~---~--~~~~~~g----~~~~~l~~~~~~~~~~~~~~~~~~~~~g   76 (160)
T 3r4q_A            6 PSAIMETALYADDLDAAEAFYRDVFGLEMVLKLPG---Q--LVFFKCG----RQMLLLFDPQESSRADANNPIPRHGAVG   76 (160)
T ss_dssp             CSCEEEEEEECSCHHHHHHHHHHHSCCEEEEEETT---T--EEEEEET----TEEEEEECHHHHTCCCTTCCSCCCEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEEecCC---c--EEEEeCC----CEEEEEEecCCccCccccCCCCcCCCcc
Confidence            46799999999999999999999999998765321   1  2222322    233444322111        01123346


Q ss_pred             eeEEEEEe---cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          223 YAQVAIST---DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       223 ~~h~~~~v---~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      ..|++|.|   +|++++++++    +++|+++..++.. ++ +++.+|++||+||+|||+++...
T Consensus        77 ~~hi~f~V~~~~dld~~~~~l----~~~G~~~~~~~~~-~~-g~~~~~~~DPdG~~iel~~~~~~  135 (160)
T 3r4q_A           77 QGHFCFYADDKAEVDEWKTRF----EALEIPVEHYHRW-PN-GSYSVYIRDPAGNSVEVGEGKLW  135 (160)
T ss_dssp             ECEEEEEESSHHHHHHHHHHH----HTTTCCCCEEEEC-TT-SCEEEEEECTTCCEEEEEEGGGG
T ss_pred             eeEEEEEeCCHHHHHHHHHHH----HHCCCEEeccccc-cC-CcEEEEEECCCCCEEEEEeCCCC
Confidence            79999999   8888888888    9999998755433 23 36899999999999999997653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.66  E-value=9.8e-16  Score=114.67  Aligned_cols=117  Identities=15%  Similarity=0.157  Sum_probs=82.2

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeee-----cCc-ce-eccCcceeE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-----YGV-TE-YTKGNAYAQ  225 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-----~~~-~~-~~~~~~~~h  225 (291)
                      ++.|+.|.|+|++++.+||+++|||++......  ..+..  +..+    ...+.+...     ... .. ...+++ .|
T Consensus         8 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~--~~~~~--~~~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~-~~   78 (141)
T 2rbb_A            8 DLSYVNIFTRDIVAMSAFYQQVFGFQEIESIRS--PIFRG--LDTG----KSCIGFNAHEAYELMQLAQFSETSGIK-FL   78 (141)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHHHCCEECGGGCB--TTEEE--EECS----SSEEEEECTHHHHHTTCGGGCCCBSCC-EE
T ss_pred             cccEEEEEECCHHHHHHHHHHhcCCeeecccCC--CceEE--eecC----CEEEEEcCccccccccccccCCCCCCe-EE
Confidence            789999999999999999999999997643221  22322  2221    123333211     000 01 112334 59


Q ss_pred             EEEEec---chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          226 VAISTD---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 ~~~~v~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ++|.|+   |++++++++    +++|+++..+|...++ +++.+||+||+||.|||++...
T Consensus        79 ~~f~v~~~~dv~~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  134 (141)
T 2rbb_A           79 LNFDVDTKEAVDKLVPVA----IAAGATLIKAPYETYY-HWYQAVLLDPERNVFRINNVLE  134 (141)
T ss_dssp             EEEECSCHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEEC-
T ss_pred             EEEEcCCHHHHHHHHHHH----HHcCCeEecCccccCC-ccEEEEEECCCCCEEEEEEccc
Confidence            999999   588888888    9999999888877766 3689999999999999998654

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.65  E-value=1.1e-15  Score=115.50  Aligned_cols=114  Identities=17%  Similarity=0.287  Sum_probs=82.2

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCc--------eeEEEeeeecCcceeccCcce
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQ--------TTVLELTYNYGVTEYTKGNAY  223 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~l~~~~~~~~~~~~~~~  223 (291)
                      .++.|+.|.|+|++++.+||+++|||++...   ++..+.++..+  +...        .....+...      +..++ 
T Consensus        24 ~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~---~~~~~~~~~~~--~~~~~l~~~~~~~~~~~l~~~------~~~~g-   91 (148)
T 2r6u_A           24 GRIVHFEIPFDDGDRARAFYRDAFGWAIAEI---PDMDYSMVTTG--PVGESGMPDEPGYINGGMMQR------GEVTT-   91 (148)
T ss_dssp             CCEEEEEEEESSHHHHHHHHHHHHCCEEEEE---TTTTEEEEECS--CBCTTSSBCSSSCBCEEEEES------SSSCS-
T ss_pred             CceEEEEEEeCCHHHHHHHHHHccCcEEEEC---CCCCEEEEEeC--CcceeecccCCcccccceeec------CCCCe-
Confidence            4799999999999999999999999998752   12233333322  2100        011111110      01133 


Q ss_pred             eEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          224 AQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 ~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +|++|.|+|++++++++    +++|+++..+|...++. ++.+||+||+|+.|||++..
T Consensus        92 ~~l~f~v~dld~~~~~l----~~~G~~~~~~~~~~~~~-g~~~~~~DPdG~~iel~~~~  145 (148)
T 2r6u_A           92 PVVTVDVESIESALERI----ESLGGKTVTGRTPVGNM-GFAAYFTDSEGNVVGLWETA  145 (148)
T ss_dssp             CEEEEECSCHHHHHHHH----HHTTCEEEEEEEEETTT-EEEEEEECTTSCEEEEEEEC
T ss_pred             EEEEEEcCCHHHHHHHH----HHcCCeEecCCeecCCC-EEEEEEECCCCCEEEEEecC
Confidence            59999999999999999    99999998888776632 48999999999999999865

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.65  E-value=2.5e-15  Score=111.51  Aligned_cols=121  Identities=14%  Similarity=0.073  Sum_probs=82.4

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++.....    .  +..+...+    ..+.+....... .+...+..|++|.
T Consensus         6 ~~~~i~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~g----~~~~l~~~~~~~-~~~~~~~~h~~~~   74 (135)
T 3rri_A            6 NPNDVFHLAIPARDLDEAYDFYVTKLGCKLARRYP----D--RITLDFFG----DQLVCHLSDRWD-REVSMYPRHFGIT   74 (135)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHTTTTCCEEEEEET----T--EEEEEETT----EEEEEEECSCSC-SSCCSSSCEEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHHHHhcCCEeeccCC----C--cEEEEEeC----CEEEEEEcCccc-ccCCCCCCeEEEE
Confidence            35689999999999999999999999999854321    1  22222111    123333221110 1123456799998


Q ss_pred             ec---chhhhHHHHHHHHHHhCCeeecCCccc---CCCCceEEEEECCCCCeEEEEechhhh
Q 022871          230 TD---DVYKSAEVVNLVTQELGGKITRQPGSI---PGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       230 v~---di~~~~~~l~~~~~~~G~~~~~~p~~~---~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                      +.   |++++++++    +++|+++..+|...   ..++.+.+||+||+||+|||++..+..
T Consensus        75 ~~~~~d~~~~~~~l----~~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~~  132 (135)
T 3rri_A           75 FRDKKHFDNLYKLA----KQRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDDR  132 (135)
T ss_dssp             CSSHHHHHHHHHHH----HHTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSGG
T ss_pred             EcChHhHHHHHHHH----HHcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECChh
Confidence            85   477777777    99999988777653   122347899999999999999876543

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.65  E-value=1e-15  Score=109.93  Aligned_cols=108  Identities=19%  Similarity=0.198  Sum_probs=79.2

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe-
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v-  230 (291)
                      +++.|+.|.|+|++++.+||+++|||++....   +..+  .++..++   +..+.+......    ..++..|++|.| 
T Consensus         2 ~~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~---~~~~--~~~~~~~---~~~l~l~~~~~~----~~~~~~~~~~~v~   69 (113)
T 1xqa_A            2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTR---GNAF--AVMRDND---GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEE---TTTE--EEEECTT---CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CeeEEEEEEeCCHHHHHHHHHHhCCCEEeccC---CCcE--EEEEcCC---CcEEEEEeCCCC----CCCceeEEEEEcC
Confidence            57899999999999999999999999977542   1222  3333222   345666543221    124678999999 


Q ss_pred             --cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          231 --DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 --~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                        +|++++++++    +++|+++. .|... +  ++.+|++||+||.|||+
T Consensus        70 ~~~d~~~~~~~l----~~~G~~~~-~p~~~-~--~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           70 SEEQVDKINQRL----KEDGFLVE-PPKHA-H--AYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHH----HHTTCCCC-CCEEC----CEEEEEEETTTEEEEEE
T ss_pred             CHHHHHHHHHHH----HHCCCEEe-cCcCC-C--cEEEEEECCCCcEEEEe
Confidence              7888888888    99999975 45433 3  48999999999999996

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.65  E-value=1.1e-15  Score=111.62  Aligned_cols=108  Identities=13%  Similarity=0.086  Sum_probs=81.4

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      ..++.|.|+|++++.+||+++|||++...    +.++.  .+..+    ...+.+......   + .++..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~----~~~~~--~~~~~----~~~l~l~~~~~~---~-~~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFG----DRDFA--GVRRG----DIRLHISRTEHQ---I-VADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEE----CSSEE--EEEET----TEEEEEEECSCH---H-HHTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeC----CCCEE--EEEEC----CEEEEEEcCCCC---C-CCCceEEEEEECCH
Confidence            35789999999999999999999998754    12232  23322    345555442221   1 12347999999999


Q ss_pred             hhhHHHHHHHHHHh------CC--eeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          234 YKSAEVVNLVTQEL------GG--KITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       234 ~~~~~~l~~~~~~~------G~--~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +++++++    +++      |+  ++..+|...++ + +.++++||+||.|||.++
T Consensus        72 d~~~~~l----~~~~~~~~~G~~~~~~~~~~~~~~-g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEW----ARAVSTDYADTSGPAMTPVGESPA-G-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHH----TTTSCSCTTCTTSCEECCCEEETT-E-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHH----HhhccccccCccccccCCCcCCCC-C-cEEEEECCCCCEEEEecC
Confidence            9999999    999      99  88888877776 3 889999999999999975

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.65  E-value=5.3e-15  Score=127.07  Aligned_cols=123  Identities=14%  Similarity=0.107  Sum_probs=92.6

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +.+.+|+|+.|.|+|++++.+||+++|||++..... .++.....++..++....  +.+....    .....+++|++|
T Consensus       149 ~~~~~l~Hv~l~v~D~~~a~~FY~~vLG~~~~~~~~-~~g~~~~~~l~~~~~~~~--l~~~~~~----~~~~~~~~Hiaf  221 (339)
T 3lm4_A          149 IPVKRIDHLNLMSSDVTAVKDSFERHLGFRTTERVV-DGNVEIGAWMSSNLLGHE--VACMRDM----TGGHGKLHHLAF  221 (339)
T ss_dssp             SCCCEEEEEEEEESCHHHHHHHHHHHHCCEEEEEEE-ETTEEEEEEEESSSSSCS--EEEEECT----TSCCSEEEEEEE
T ss_pred             CCcceeeeEEEEcCCHHHHHHHHHHhCCCeEEEEEe-cCCcEEEEEEEeCCCceE--EEEeccC----CCCCCceeEEEE
Confidence            468999999999999999999999999999987754 333345566665443222  3333211    112346999999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   +++++++|+++|+++...|.....+...++||+||+||+||++...
T Consensus       222 ~v~d~~~v~~~~~~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          222 FYGTGQHNIDAVEMFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             ECCCHHHHHHHHHHHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             EeCCHHHHHHHHHHHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            9999   8888999999999988766654545556799999999999998654

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.64  E-value=3.3e-15  Score=112.88  Aligned_cols=118  Identities=22%  Similarity=0.197  Sum_probs=76.3

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec-------CcceeccCcc
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY-------GVTEYTKGNA  222 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-------~~~~~~~~~~  222 (291)
                      ...++.||+|.|+|+++|++||++ ||+........  .........  .   ...+.+....       .......+.+
T Consensus         6 ~~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~--~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (149)
T 4gym_A            6 SQSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTD--ESCACMVVS--E---QAFVMLIDRARFADFTSKPIADATATT   77 (149)
T ss_dssp             -CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCB--TTEEEEEEE--T---TEEEEEEEHHHHGGGCSSCBCCTTTCB
T ss_pred             CCccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecC--CceeEEeec--C---cceEeeeccccccccccccCCCCCCCC
Confidence            356899999999999999999988 45554332222  112222222  1   1222221110       0001123345


Q ss_pred             eeEEEEEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       223 ~~h~~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      ..|++|.|.+   ++++++++    +++|+++..+|..+++  ++.+||+|||||+|||+..
T Consensus        78 ~~~~a~~v~~~~~vd~~~~~~----~~~g~~~~~~p~~~~~--~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           78 EAIVCVSAIDRDDVDRFADTA----LGAGGTVARDPMDYGF--MYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             SCEEEEECSSHHHHHHHHHHH----HHTTCEECSCCEECSS--EEEEEEECTTCCEEEEEEE
T ss_pred             eeEEEEEeccHHHHHHHHHHH----HhcCceeeccccccCC--EEEEEEEcCCCCEEEEEEE
Confidence            6799999965   45555555    9999999999988766  4889999999999999863

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.64  E-value=3.5e-15  Score=111.64  Aligned_cols=114  Identities=24%  Similarity=0.306  Sum_probs=83.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEEEe
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAIST  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~~v  230 (291)
                      .++.|+.|.|+|++++.+||+++|||++.....  +  ..  ++..+    ...+.+........ ....++..|++|.|
T Consensus         3 ~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~--~~--~~~~~----~~~l~l~~~~~~~~~~~~~~~~~hi~~~v   72 (141)
T 1npb_A            3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWN--T--GA--YLTCG----DLWVCLSYDEARQYVPPQESDYTHYAFTV   72 (141)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEET--T--EE--EEEET----TEEEEEEECTTCCCCCGGGSCSCEEEEEC
T ss_pred             ceEEEEEEEeCCHHHHHHHHHhccCCEEEeecC--C--cE--EEEEC----CEEEEEEECCCCCCCCCCCCCceEEEEEe
Confidence            468999999999999999999999999875432  1  12  23322    23455544321111 12345778999999


Q ss_pred             c--chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          231 D--DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~--di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +  |++++++++    +++|+++..+|..    +++.+|++||+||.|||++...
T Consensus        73 ~~~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  119 (141)
T 1npb_A           73 AEEDFEPLSQRL----EQAGVTIWKQNKS----EGASFYFLDPDGHKLELHVGSL  119 (141)
T ss_dssp             CHHHHHHHHHHH----HHTTCCEEECCCS----SSEEEEEECTTCCEEEEEECCH
T ss_pred             CHHHHHHHHHHH----HHCCCeEeccCCC----ceeEEEEECCCCCEEEEEECch
Confidence            6  888888888    9999998876642    3589999999999999998654

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.64  E-value=3.8e-15  Score=110.58  Aligned_cols=111  Identities=25%  Similarity=0.268  Sum_probs=82.4

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec-
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~-  231 (291)
                      ++.|+.|.|+|++++.+||+++|||++.....  +  ..  ++..+    +..+.+......  ....++..|++|.|+ 
T Consensus         4 ~i~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~--~--~~--~~~~~----~~~l~l~~~~~~--~~~~~~~~h~~~~v~~   71 (135)
T 1nki_A            4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWD--Q--GA--YLELG----SLWLCLSREPQY--GGPAADYTHYAFGIAA   71 (135)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEET--T--EE--EEEET----TEEEEEEECTTC--CCCCSSSCEEEEEECH
T ss_pred             eEeEEEEEeCCHHHHHHHHHHhcCCEEEEcCC--C--ce--EEecC----CEEEEEEeCCCC--CCCCCCcceEEEEccH
Confidence            57899999999999999999999999875431  1  11  23322    234555543211  123346789999997 


Q ss_pred             -chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          232 -DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       232 -di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                       |++++++++    +++|+++..++..    +++.+|++||+||.|||++...
T Consensus        72 ~d~~~~~~~l----~~~G~~~~~~~~~----~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           72 ADFARFAAQL----RAHGVREWKQNRS----EGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCCS----SSCEEEEECTTCCEEEEESCCH
T ss_pred             HHHHHHHHHH----HHCCCceecCCCC----CeEEEEEECCCCCEEEEEECCc
Confidence             888888888    9999998876643    3589999999999999998655

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.64  E-value=1.4e-15  Score=130.18  Aligned_cols=118  Identities=28%  Similarity=0.513  Sum_probs=92.1

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC-----------CcceeEEEecccCCCceeEEEeeeecCcceecc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK  219 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~  219 (291)
                      .+++.|++|.|+|++++++||+++|||++..+....           ++++...++..+.......++|..+.+...+..
T Consensus        25 ~~~i~Hv~l~V~Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~  104 (330)
T 3zi1_A           25 ARRALHFVFKVGNRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKL  104 (330)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCB
T ss_pred             cceeeEEEEEeCCHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCcccc
Confidence            357999999999999999999999999987665443           345566676665544567788877655444455


Q ss_pred             CcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       220 ~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      ++++.|++|.|+|+   .+++    +++|+++...|.       +.+|++||||+.|||++..
T Consensus       105 ~~g~~hiaf~V~d~---~~~l----~~~G~~~~~~~~-------~~~~~~DPdG~~iel~~~~  153 (330)
T 3zi1_A          105 GNDFMGITLASSQA---VSNA----RKLEWPLTEVAE-------GVFETEAPGGYKFYLQNRS  153 (330)
T ss_dssp             CSSEEEEEEECHHH---HHHH----HHHTCCCEEEET-------TEEEEECTTSCEEEEESSC
T ss_pred             CCCeeEEEEECchH---HHHH----HHcCCceeccCC-------ceEEEECCCCCEEEEEecC
Confidence            67899999999986   5566    889999876542       4789999999999999965

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.63  E-value=3.5e-16  Score=117.06  Aligned_cols=117  Identities=18%  Similarity=0.221  Sum_probs=83.8

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEe-----ec--c-CCCCcccCCC
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL-----TY--N-YGVTSYDIGT   91 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~-~~~~~~~~~~   91 (291)
                      .+++++|+.|.|+|++++.+||+++|||++..+.+    .  ...+.  . .  +.+..     ..  + ....+...+.
T Consensus         5 ~~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~~----~--~~~~~--~-g--~~l~~~~~~~~~~~~~~~~~~~~~~~   73 (141)
T 2qnt_A            5 QGMRFVNPIPFVRDINRSKSFYRDRLGLKILEDFG----S--FVLFE--T-G--FAIHEGRSLEETIWRTSSDAQEAYGR   73 (141)
T ss_dssp             CSCCCCCCCCEESCHHHHHHHHHHTTCCCEEEECS----S--EEEET--T-S--CEEEEHHHHHHHHHSCCC--CCCSCC
T ss_pred             cccccceEEEEECCHHHHHHHHHHhcCCEEEEEcC----C--cEEEe--c-c--ceeccCchhhhhccccCCccccccCC
Confidence            46789999999999999999999999999876531    1  12232  1 1  11211     00  0 1111122345


Q ss_pred             CeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        92 g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +..|++|.|+|+++++++|++ |+++..++.+.++|.. .++++||+|+.|||++...
T Consensus        74 ~~~~~~~~v~dv~~~~~~l~~-G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           74 RNMLLYFEHADVDAAFQDIAP-HVELIHPLERQAWGQR-VFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SSCEEEEEESCHHHHHC-CGG-GSCEEEEEEECTTSCE-EEEEECTTCCEEEEEECC-
T ss_pred             CceEEEEEeCcHHHHHHHHHc-CCccccCCccCCCCCE-EEEEECCCCCEEEEEecch
Confidence            788999999999999999999 9998877777776644 4899999999999998764

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.63  E-value=1.1e-14  Score=123.38  Aligned_cols=146  Identities=18%  Similarity=0.223  Sum_probs=96.8

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCC-eeEE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG-FGHF   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~i   96 (291)
                      .+.+.+++|+.|.|+|++++.+||+++|||++........+.....++..+.....+  .+...       ...| ++|+
T Consensus       145 ~~~~~~i~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~-------~~~g~~~hi  215 (307)
T 1mpy_A          145 GMAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDV--AFIHH-------PEKGRLHHV  215 (307)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSE--EEEEC-------SSSSEEEEE
T ss_pred             CCCcCceeeEEEEcCCHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeE--EEecC-------CCCCcceEE
Confidence            357899999999999999999999999999988664322221222344543322222  22211       1224 7999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC-CceeEEeeeCCccccHHHHH
Q 022871           97 AIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPE-PLCQVMLRVGDLGRSIKFYE  172 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~-~~~hv~l~v~D~~~~~~Fy~  172 (291)
                      +|.|+   |+++++++|+++|+++...|...+.+....+||+||+||+|||++...... ...-+.....++.+...||.
T Consensus       216 ~f~v~d~~dv~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~~~~~~~~~~~~w~~~~~~~~~~~~~  295 (307)
T 1mpy_A          216 SFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHD  295 (307)
T ss_dssp             EEECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCCBCCTTSCCEEEEGGGHHHHHCTTT
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecccccCCCCCCeEeecccccccceecC
Confidence            99999   567778999999999876665544332345899999999999999753211 11112334555555555554

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.62  E-value=8.9e-15  Score=108.49  Aligned_cols=118  Identities=13%  Similarity=0.166  Sum_probs=80.3

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCC
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATED  102 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d  102 (291)
                      .-.+..|.|+|++++++||+++|||++..+.+      ..+++..++  .  .+.+...........+.+..|++|.|+|
T Consensus         7 ~~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~~------~~~~l~~~~--~--~l~l~~~~~~~~~~~~~~~~~l~~~v~d   76 (134)
T 3fcd_A            7 HQITPFLHIPDMQEALTLFCDTLGFELKYRHS------NYAYLELSG--C--GLRLLEEPARKIIPDGIARVAICIDVSD   76 (134)
T ss_dssp             CEEEEEEEESCHHHHHHHHTTTTCCEEEEEET------TEEEEEETT--E--EEEEEECCCC---------EEEEEECSC
T ss_pred             hcceeEEEECCHHHHHHHHHhccCcEEEEeCC------CeEEEEECC--E--EEEEEeCCCCCcCCCCCceEEEEEEeCC
Confidence            34568999999999999999999999987642      145555543  2  2333332221111112234799999999


Q ss_pred             HHHHHHHHHHcC----CeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022871          103 VYKLVENIRAKG----GNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       103 ~~~~~~~l~~~G----~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                      +++++++|+++|    +++..++...++|.+ .++|+||+||.|||.+.....
T Consensus        77 v~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~~~  128 (134)
T 3fcd_A           77 IDSLHTKLSPALENLPADQVEPLKNMPYGQR-EFQVRMPDGDWLNFTAPLAEG  128 (134)
T ss_dssp             HHHHHHHHHHHHTTSCGGGEEEEEECTTSEE-EEEEECTTSCEEEEEEECCTT
T ss_pred             HHHHHHHHHhcCCccCCccccCCcccCCCcE-EEEEECCCCCEEEEEEccccc
Confidence            999999999665    445556666676654 489999999999999987543

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.62  E-value=1.4e-14  Score=106.17  Aligned_cols=111  Identities=21%  Similarity=0.277  Sum_probs=81.6

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCH
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~  103 (291)
                      ..|+.|.|+|++++.+||++ |||++..+.    +  ...++..++  .  .+.+.......   ...+..|++|.|+|+
T Consensus         4 ~~~~~l~v~D~~~a~~FY~~-LG~~~~~~~----~--~~~~~~~~~--~--~l~l~~~~~~~---~~~~~~~~~~~v~dv   69 (126)
T 1ecs_A            4 QATPNLPSRDFDSTAAFYER-LGFGIVFRD----A--GWMILQRGD--L--MLEFFAHPGLD---PLASWFSCCLRLDDL   69 (126)
T ss_dssp             EEEEEEEESCHHHHHHHHHT-TTCEEEEEC----S--SEEEEEETT--E--EEEEEECTTCC---GGGCCCEEEEEESCH
T ss_pred             cEEEEEEeCCHHHHHHHHHH-CCCEEEecC----C--CEEEEEeCC--E--EEEEEeCCCCC---CCCcceEEEEEECCH
Confidence            46899999999999999998 999997651    1  134455442  2  23333221111   123678999999999


Q ss_pred             HHHHHHHHHcCCeE-------ecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          104 YKLVENIRAKGGNV-------TREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       104 ~~~~~~l~~~G~~~-------~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ++++++|+++|+++       ..+|...++|.+ .++++||+||.|||++...
T Consensus        70 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~~  121 (126)
T 1ecs_A           70 AEFYRQCKSVGIQETSSGYPRIHAPELQGWGGT-MAALVDPDGTLLRLIQNEL  121 (126)
T ss_dssp             HHHHHHHHHTTCCBCSSSSSEEEEEEECTTSSE-EEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHHHHCCCccccccCccccCCcccCcccE-EEEEECCCCCEEEEecchh
Confidence            99999999999984       556666666655 4899999999999998753

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.62  E-value=6.5e-16  Score=115.56  Aligned_cols=116  Identities=16%  Similarity=0.187  Sum_probs=83.1

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEe-----eee---cCcceeccCcc
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLEL-----TYN---YGVTEYTKGNA  222 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l-----~~~---~~~~~~~~~~~  222 (291)
                      .+++.|+.|.|+|++++.+||+++|||++....  +  .+ +. +..     +..+..     ...   .+......+.+
T Consensus         6 ~~~l~~v~l~v~D~~~a~~FY~~~LG~~~~~~~--~--~~-~~-~~~-----g~~l~~~~~~~~~~~~~~~~~~~~~~~~   74 (141)
T 2qnt_A            6 GMRFVNPIPFVRDINRSKSFYRDRLGLKILEDF--G--SF-VL-FET-----GFAIHEGRSLEETIWRTSSDAQEAYGRR   74 (141)
T ss_dssp             SCCCCCCCCEESCHHHHHHHHHHTTCCCEEEEC--S--SE-EE-ETT-----SCEEEEHHHHHHHHHSCCC--CCCSCCS
T ss_pred             ccccceEEEEECCHHHHHHHHHHhcCCEEEEEc--C--Cc-EE-Eec-----cceeccCchhhhhccccCCccccccCCC
Confidence            467899999999999999999999999976532  1  12 22 221     122321     110   01111123457


Q ss_pred             eeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ..|++|.|+|++++++++    ++ |+++..+|...++ +.+.+|++||+||.|||++...
T Consensus        75 ~~~~~~~v~dv~~~~~~l----~~-G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           75 NMLLYFEHADVDAAFQDI----AP-HVELIHPLERQAW-GQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             SCEEEEEESCHHHHHC-C----GG-GSCEEEEEEECTT-SCEEEEEECTTCCEEEEEECC-
T ss_pred             ceEEEEEeCcHHHHHHHH----Hc-CCccccCCccCCC-CCEEEEEECCCCCEEEEEecch
Confidence            789999999999999999    99 9998888887776 3589999999999999998654

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.62  E-value=3e-15  Score=112.91  Aligned_cols=116  Identities=16%  Similarity=0.169  Sum_probs=80.7

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc---ceeccCcceeEEE
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV---TEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~h~~  227 (291)
                      ..++.|+.|.|+|++++.+||+++|||++....   +. ...  +..+    ...+.+......   ......++..|++
T Consensus        25 i~~i~hv~l~v~Dl~~a~~FY~~vLG~~~~~~~---~~-~~~--l~~g----~~~l~l~~~~~~~~~~~~~~~~g~~~~~   94 (147)
T 3zw5_A           25 IRRLDHIVMTVKSIKDTTMFYSKILGMEVMTFK---ED-RKA--LCFG----DQKFNLHEVGKEFEPKAAHPVPGSLDIC   94 (147)
T ss_dssp             CEEEEEEEEEESCHHHHHHHHHHHHCCEEEEET---TT-EEE--EEET----TEEEEEEETTSCCSSCCSSCCTTCCEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhcCCEEEecC---CC-ceE--EEEC----CcEEEEEEcCCCcCcccCCCCCCCceEE
Confidence            357899999999999999999999999987432   11 222  2222    124444332111   1112334668899


Q ss_pred             EEec-chhhhHHHHHHHHHHhCCeeecCCcccCCC--CceEEEEECCCCCeEEEEe
Q 022871          228 ISTD-DVYKSAEVVNLVTQELGGKITRQPGSIPGL--NTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~-di~~~~~~l~~~~~~~G~~~~~~p~~~~~~--~~~~~~~~Dp~G~~iel~~  280 (291)
                      |.+. |++++++++    +++|+++...|...++.  ..+.+||+||||++|||++
T Consensus        95 ~~~~~dl~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A           95 LITEVPLEEMIQHL----KACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             EECSSCHHHHHHHH----HHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             EEeccCHHHHHHHH----HHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            9886 999999999    99999987666543221  2367999999999999987

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.62  E-value=2.3e-14  Score=121.54  Aligned_cols=122  Identities=16%  Similarity=0.169  Sum_probs=90.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-CceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      +.+.+|+|+.|.|+|++++.+||+++|||++......+. +.....++..++....+  .+...      ....+++|++
T Consensus       147 ~~~~~i~Hv~l~v~D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~Hia  218 (309)
T 3hpy_A          147 IAPIQLDHCLLYGPNIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDI--AFVEY------PEKGKLHHCS  218 (309)
T ss_dssp             SCCSEEEEEEEEESCHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSE--EEEEC------SSTTEEEEEE
T ss_pred             cccceeeeEEEEeCCHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeE--EEecC------CCCCceeEEE
Confidence            568999999999999999999999999999887654333 23445666654432222  22211      1123689999


Q ss_pred             EEeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           98 IATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |.|+|+++   ++++|+++|+++...|.....+...++||+||+||+|||....
T Consensus       219 f~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          219 FLLESWEQVLRAGDIMSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             EECCCHHHHHHHHHHHHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            99988664   6789999999988776665544556789999999999998874

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.62  E-value=2.8e-14  Score=121.78  Aligned_cols=121  Identities=19%  Similarity=0.236  Sum_probs=89.6

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      .+.+.+|+|+.|.|+|++++.+|| ++|||++......+.+.....++..+.....  +.+...       .+++++|++
T Consensus       147 ~~~~~~l~Hv~l~v~D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~--~~~~~~-------~~~~~~Hia  216 (323)
T 1f1u_A          147 AGELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHD--TALTGG-------NGPRMHHVA  216 (323)
T ss_dssp             TTCCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCS--EEEEES-------SBSEEEEEE
T ss_pred             CCCCceeeeEEEecCCHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCccc--EEEeCC-------CCCCceEEE
Confidence            356899999999999999999999 9999999876554444444556655432221  222211       123889999


Q ss_pred             EEeCCHHH---HHHHHHHcCC--eEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           98 IATEDVYK---LVENIRAKGG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d~~~---~~~~l~~~G~--~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |.|+|+++   ++++|+++|+  ++...|.....+...++|++||+||.||+....
T Consensus       217 f~v~d~d~v~~~~~~l~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          217 FATHEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             EECSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999988   9999999999  877544443333445689999999999999764

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.61  E-value=8e-15  Score=106.89  Aligned_cols=108  Identities=15%  Similarity=0.098  Sum_probs=80.2

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCH
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDV  103 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~  103 (291)
                      ..|+.|.|+|++++.+||+++|||++..+.   + .  ..++..++  ..  +.+...... +  . .+..|++|.|+|+
T Consensus         6 ~~~~~l~v~D~~~a~~FY~~~LG~~~~~~~---~-~--~~~~~~~~--~~--l~l~~~~~~-~--~-~~~~~~~~~v~dv   71 (122)
T 1qto_A            6 GAVPVLTAVDVPANVSFWVDTLGFEKDFGD---R-D--FAGVRRGD--IR--LHISRTEHQ-I--V-ADNTSAWIEVTDP   71 (122)
T ss_dssp             CCCCEEEESSHHHHHHHHHHTTCCEEEEEC---S-S--EEEEEETT--EE--EEEEECSCH-H--H-HTTCEEEEEESCH
T ss_pred             ceeEEEEcCCHHHHHHHHHhccCcEEeeCC---C-C--EEEEEECC--EE--EEEEcCCCC-C--C-CCceEEEEEECCH
Confidence            358999999999999999999999987651   1 1  34455432  22  333322111 1  1 1236999999999


Q ss_pred             HHHHHHHHHc------CC--eEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          104 YKLVENIRAK------GG--NVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       104 ~~~~~~l~~~------G~--~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      ++++++|+++      |+  .+..++...++| + .++++||+||.|+|.+.
T Consensus        72 d~~~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~-~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           72 DALHEEWARAVSTDYADTSGPAMTPVGESPAG-R-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHHHHTTTSCSCTTCTTSCEECCCEEETTE-E-EEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHhhccccccCccccccCCCcCCCCC-c-EEEEECCCCCEEEEecC
Confidence            9999999999      99  887777777776 4 48899999999999975

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.60  E-value=9.4e-15  Score=109.86  Aligned_cols=115  Identities=17%  Similarity=0.122  Sum_probs=78.6

Q ss_pred             eeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec--Cc------ceeccCcceeEE
Q 022871          155 CQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY--GV------TEYTKGNAYAQV  226 (291)
Q Consensus       155 ~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--~~------~~~~~~~~~~h~  226 (291)
                      ..+.|.|+|++++.+||+++|||++.....  +..+..  +..+    ...+.|....  +.      ...+.+.++ ++
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~--~~~~~~--l~~g----~~~l~l~~~~~~~~~~~~~~~~~~~~~g~-~~   77 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERP--DEEFVY--LTLD----GVDVMLEGIAGKSRKWLSGDLEFPLGSGV-NF   77 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEG--GGTEEE--EEET----TEEEEEEEC-----------CCSSTTTTE-EE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecC--CCCEEE--EEcC----CeEEEEEeccCCCcccccCccccCCCCce-EE
Confidence            468899999999999999999999864222  122322  3322    2344444321  10      011223344 49


Q ss_pred             EEEecchhhhHHHHHHHHHH-hCCeeecCCcc-------cCCCCceEEEEECCCCCeEEEEechh
Q 022871          227 AISTDDVYKSAEVVNLVTQE-LGGKITRQPGS-------IPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       227 ~~~v~di~~~~~~l~~~~~~-~G~~~~~~p~~-------~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +|.|+|++++++++    ++ +|+++..+|..       .++ +++.+||+|||||+|||++...
T Consensus        78 ~~~v~dvd~~~~~l----~~~~G~~~~~~~~~~~~g~~~~~~-~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           78 QWDVIDIEPLYQRV----NESAADSIYLALESKSYQCGDSIA-TQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             EEECSCHHHHHHHH----HHHHGGGEEEEEEEEEC-----CC-EEEEEEEECTTCCEEEEEEC--
T ss_pred             EEEECCHHHHHHHH----HhhCCCeEecCccccccccCCCCC-cceEEEEECCCCCEEEEEEcCC
Confidence            99999999999999    99 99998877764       222 3588999999999999998754

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.60  E-value=5.5e-15  Score=111.68  Aligned_cols=120  Identities=17%  Similarity=0.220  Sum_probs=78.6

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEE-Eeec--cC-C-CCcccCCCCeeE
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV-ELTY--NY-G-VTSYDIGTGFGH   95 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~-~-~~~~~~~~g~~~   95 (291)
                      ..++.||.|.|+|++++++||++ ||+........+.    ..++.... ...+.+ ....  .. . ......+.+..|
T Consensus         7 ~~rl~~V~L~V~Dl~~s~~FY~~-lg~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (149)
T 4gym_A            7 QSRLTFVNLPVADVAASQAFFGT-LGFEFNPKFTDES----CACMVVSE-QAFVMLIDRARFADFTSKPIADATATTEAI   80 (149)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHH-TTCEECGGGCBTT----EEEEEEET-TEEEEEEEHHHHGGGCSSCBCCTTTCBSCE
T ss_pred             CccEEEEEEEeCCHHHHHHHHHH-hCCCcceeecCCc----eeEEeecC-cceEeeeccccccccccccCCCCCCCCeeE
Confidence            57889999999999999999998 5665544332221    12222211 111111 1110  00 1 111112335579


Q ss_pred             EEEEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           96 FAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++|.|.   +++++++++.++|+.+..+|.+.+++  +.+||+|||||+|||+.-.
T Consensus        81 ~a~~v~~~~~vd~~~~~~~~~g~~~~~~p~~~~~~--~~~~f~DPDGn~iEi~~~~  134 (149)
T 4gym_A           81 VCVSAIDRDDVDRFADTALGAGGTVARDPMDYGFM--YGRSFHDLDGHLWEVMWMS  134 (149)
T ss_dssp             EEEECSSHHHHHHHHHHHHHTTCEECSCCEECSSE--EEEEEECTTCCEEEEEEEC
T ss_pred             EEEEeccHHHHHHHHHHHHhcCceeeccccccCCE--EEEEEEcCCCCEEEEEEEC
Confidence            999995   57889999999999999888876653  3589999999999998643

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.59  E-value=3.2e-14  Score=107.34  Aligned_cols=118  Identities=18%  Similarity=0.171  Sum_probs=79.7

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccC--CCC-----
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI--GTG-----   92 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g-----   92 (291)
                      .+.++.|+.|.|+|++++.+||+++|||++.......++ +  .++  +.   .  +.+...........  +.+     
T Consensus        18 ~~~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~-~--~~~--g~---~--l~l~~~~~~~~~~~~~~~~~~~g~   87 (148)
T 3bt3_A           18 YVVRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDEG-F--GDY--GC---V--FDYPSEVAVAHLTPFRGFHLFKGE   87 (148)
T ss_dssp             CEEEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTTS-C--EEE--EE---E--ESSCTTTTSCC--CCCSEEEEESC
T ss_pred             ceEEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCCC-c--cEE--cc---E--EEEeccCCCcccccccccceeecc
Confidence            478999999999999999999999999998642211111 1  122  21   1  22311111000000  111     


Q ss_pred             --eeEEEE-EeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           93 --FGHFAI-ATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        93 --~~~i~~-~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                        ..+.+| .|+|+++++++|+++|+++..+|...++|.+ .++|+||+||.|+|.+..
T Consensus        88 ~~~~~~~~~~v~dvd~~~~~l~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           88 PIKGVAGFMMIEGIDALHKYVKENGWDQISDIYTQPWGAR-ECSITTTDGCILRFFESI  145 (148)
T ss_dssp             CCSSEEEEEEEECHHHHHHHHHHTTCCCBCCCEEETTTEE-EEEEECTTSCEEEEEEEC
T ss_pred             CCCccEEEEEcCCHHHHHHHHHHcCCccccCcccCCCccE-EEEEECCCCCEEEEeeec
Confidence              112255 9999999999999999998888877776644 489999999999999864

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.59  E-value=1.8e-14  Score=108.26  Aligned_cols=118  Identities=15%  Similarity=0.250  Sum_probs=78.2

Q ss_pred             eEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeec--cC--C--CCcccCCCCeeEEEE
Q 022871           25 LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY--NY--G--VTSYDIGTGFGHFAI   98 (291)
Q Consensus        25 ~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~--~~~~~~~~g~~~i~~   98 (291)
                      ..+.|.|+|++++.+||+++|||++......+  .  ..++..++  ..+.+....  ..  .  ......+.++. ++|
T Consensus         7 ~~~~l~v~Dl~~s~~FY~~~LG~~~~~~~~~~--~--~~~l~~g~--~~l~l~~~~~~~~~~~~~~~~~~~~~g~~-~~~   79 (145)
T 2rk9_A            7 VVPELYCFDINVSQSFFVDVLGFEVKYERPDE--E--FVYLTLDG--VDVMLEGIAGKSRKWLSGDLEFPLGSGVN-FQW   79 (145)
T ss_dssp             EEEEEEESSHHHHHHHHHHTTCCEEEEEEGGG--T--EEEEEETT--EEEEEEEC-----------CCSSTTTTEE-EEE
T ss_pred             ceEEEEECCHHHHHHHHHhccCCEEEeecCCC--C--EEEEEcCC--eEEEEEeccCCCcccccCccccCCCCceE-EEE
Confidence            46899999999999999999999987543221  1  34455442  222222110  00  0  11112344665 999


Q ss_pred             EeCCHHHHHHHHHH-cCCeEecCCcc-------cCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871           99 ATEDVYKLVENIRA-KGGNVTREPGP-------LKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        99 ~v~d~~~~~~~l~~-~G~~~~~~~~~-------~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      .|+|+++++++|++ +|+++..++..       ..++.+ .++|+||||+.|||++....
T Consensus        80 ~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~-~~~~~DPdG~~iel~~~~~~  138 (145)
T 2rk9_A           80 DVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQK-QFMVQTPDGYLFRFCQDIHE  138 (145)
T ss_dssp             ECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEE-EEEEECTTCCEEEEEEC---
T ss_pred             EECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcce-EEEEECCCCCEEEEEEcCCC
Confidence            99999999999999 99998776654       233333 47899999999999987643

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.59  E-value=3.7e-14  Score=119.72  Aligned_cols=122  Identities=16%  Similarity=0.284  Sum_probs=87.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC--------C-ceeeEEEecCCCCceeEEEeeccCCCCcccC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE--------E-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDI   89 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~--------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (291)
                      ..+.+++|+.|.|+|++++.+||+++|||++......+.        + .....++..++....  +.+...      ..
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~  209 (300)
T 2zyq_A          138 TGEQGMGHVVLSTRDDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHS--LAFLPM------PT  209 (300)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCS--EEEESS------CC
T ss_pred             cCCCccCeEEEEeCCHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccE--EEEecC------CC
Confidence            357899999999999999999999999999875432221        1 223455554432222  223221      12


Q ss_pred             CCCeeEEEEEeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           90 GTGFGHFAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 ~~g~~~i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ..+++|++|.|+|+++   ++++|+++|+++...|...+.+...++||+||+||+|||+...
T Consensus       210 ~~g~~h~af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (300)
T 2zyq_A          210 SSGIVHLMVEVEQADDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEG  271 (300)
T ss_dssp             SSSEEEEEEEBSSHHHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECC
T ss_pred             CCCceEEEEEeCCHHHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            3478999999998665   5999999999988766554444445689999999999999864

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.58  E-value=5.3e-14  Score=119.35  Aligned_cols=116  Identities=17%  Similarity=0.312  Sum_probs=88.0

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..+.+|.|+.|.|+|++++.+||+++|||++..+..  +   ...|+..+.....  +.+...       . .|++|++|
T Consensus       137 ~~~~~l~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~--~---~~~fl~~~~~~~~--l~l~~~-------~-~g~~hi~f  201 (310)
T 3b59_A          137 GVPVKISHIVLHSPNHQDMVKFFTDVLGFKVSDWLG--D---FMCFLRCNSAHHR--IAILPG-------P-PCLNHVAY  201 (310)
T ss_dssp             CCCCEEEEEEEEETTHHHHHHHHHHTSCCEEEEEET--T---TEEEEESSSBSCS--EEEEES-------S-SEEEEEEE
T ss_pred             CcCcEeceEEEecCCHHHHHHHHHhCCCCEEEEeeC--C---eEEEEecCCCcce--EEEECC-------C-CceEEEEE
Confidence            468999999999999999999999999999876542  1   2455655432222  223221       1 47899999


Q ss_pred             EeCCHHHH---HHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           99 ATEDVYKL---VENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~d~~~~---~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .|+|++++   +++|+++|+++...+.....+...++|++||+|+.||+.+...
T Consensus       202 ~v~d~d~~~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          202 DMLSVDDMMRGAHRLKVKGIDIGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCCCSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             EcCCHHHHHHHHHHHHHcCCceeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            99998776   9999999999876665544444456899999999999998753

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.57  E-value=1.2e-14  Score=121.55  Aligned_cols=123  Identities=19%  Similarity=0.127  Sum_probs=87.6

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~  228 (291)
                      .++.+.|+.|.|+|++++++||+++|||++......... .+..+...  .   .....+....+..+ ...++.++++|
T Consensus        29 ~~g~~~~v~l~v~D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~--g---~~~~~l~~~~~~~~-~~~~~~~~~~~  102 (282)
T 3oxh_A           29 RQGTPNWVDLQTTDQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLN--G---EAVAAIAPMPPGAP-EGMPPIWNTYI  102 (282)
T ss_dssp             CTTSEEEEEEEESCHHHHHHHHHHHHCCEEEEEC-----CCEEEEEET--T---EEEEEEEECCSCC----CCCEEEEEE
T ss_pred             CCCCcEEEEEecCCHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeC--C---eeeEeeccCCCCCC-CCCCCcEEEEE
Confidence            346799999999999999999999999997654321110 34444332  1   22222322221111 12346689999


Q ss_pred             EecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      .|+|++++++++    +++|+++..+|...++. ++.++|+||+||.|||++...
T Consensus       103 ~v~d~d~~~~~l----~~~G~~~~~~p~~~~~~-g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          103 AVDDVDAVVDKV----VPGGGQVMMPAFDIGDA-GRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             ECSCHHHHHTTT----TTTTCEEEEEEEEETTT-EEEEEEECTTCCEEEEEEESS
T ss_pred             EeCCHHHHHHHH----HHCCCEEEECCEecCCC-eEEEEEECCCCCEEEEEEccc
Confidence            999999999999    99999998888776653 589999999999999998654

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.57  E-value=1.3e-14  Score=109.42  Aligned_cols=116  Identities=15%  Similarity=0.129  Sum_probs=78.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceecc-Ccce-------
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTK-GNAY-------  223 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~-------  223 (291)
                      .++.|+.|.|+|++++.+||+++|||++.......+ .+.++  +      . .+.+....+...... ....       
T Consensus        20 ~~~~hv~l~v~D~~~a~~FY~~~LG~~~~~~~~~~~-~~~~~--g------~-~l~l~~~~~~~~~~~~~~~~~~~g~~~   89 (148)
T 3bt3_A           20 VRENGPVYFTKDMDKTVKWFEEILGWSGDIVARDDE-GFGDY--G------C-VFDYPSEVAVAHLTPFRGFHLFKGEPI   89 (148)
T ss_dssp             EEECCCEEEESCHHHHHHHHHHTTCCEEEEEEECTT-SCEEE--E------E-EESSCTTTTSCC--CCCSEEEEESCCC
T ss_pred             EEeeeEEEEECCHHHHHHHHHhccCCEEEeeeecCC-CccEE--c------c-EEEEeccCCCcccccccccceeeccCC
Confidence            457899999999999999999999999753111111 12221  1      1 243311111100000 0111       


Q ss_pred             -eEEEE-EecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          224 -AQVAI-STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       224 -~h~~~-~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                       ++.+| .|+|++++++++    +++|+++..+|...++ +.+.+|++|||||.|||.+..
T Consensus        90 ~~~~~~~~v~dvd~~~~~l----~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A           90 KGVAGFMMIEGIDALHKYV----KENGWDQISDIYTQPW-GARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             SSEEEEEEEECHHHHHHHH----HHTTCCCBCCCEEETT-TEEEEEEECTTSCEEEEEEEC
T ss_pred             CccEEEEEcCCHHHHHHHH----HHcCCccccCcccCCC-ccEEEEEECCCCCEEEEeeec
Confidence             22265 999999999999    9999999888877776 458899999999999999853

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.56  E-value=6.7e-14  Score=117.63  Aligned_cols=121  Identities=20%  Similarity=0.255  Sum_probs=86.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC--CC-ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      +.+.+|+|+.|.|+|++++.+||+++|||++......+  .+ .....++..+.....  +.+...  .    ...+++|
T Consensus       138 ~~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~--~----~~~~~~h  209 (292)
T 1kw3_B          138 TGDQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAF--P----IPKRIHH  209 (292)
T ss_dssp             CGGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC--S----CSSSEEE
T ss_pred             cCCcccceEEEecCCHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcce--EEEecC--C----CCCceEE
Confidence            56899999999999999999999999999987543221  11 123445554332221  222221  0    1347899


Q ss_pred             EEEEeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCC-EEEEEeCC
Q 022871           96 FAIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~-~iel~~~~  148 (291)
                      ++|.|+|+++   ++++|+ +|+++...|...+.+...++||+||+|+ .|||....
T Consensus       210 iaf~v~d~~~v~~~~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          210 FMLQANTIDDVGYAFDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             EEEEBSSHHHHHHHHHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            9999998654   677999 9999887776655544556899999999 99999864

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.55  E-value=1.7e-13  Score=117.18  Aligned_cols=119  Identities=13%  Similarity=0.105  Sum_probs=83.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCC-CCeeEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG-TGFGHFA   97 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~i~   97 (291)
                      ..+.+|+||+|.|+|++++.+||+++|||++..+...      ...+..++....+.+  ...........+ .+++|+|
T Consensus       149 ~~i~gl~Hv~L~v~Dle~t~~FY~~vLG~~~~~~~~~------~~~~~~g~~~~~l~l--~~~~~~~~~~~g~g~~~HiA  220 (335)
T 3oaj_A          149 VAIKGFGGATLLSEQPDKTADLLENIMGLERVGKEGD------FVRYRSAGDIGNVID--LKLTPIGRGQMGAGTVHHIA  220 (335)
T ss_dssp             TSCCEEEEEEEECSSHHHHHHHHHHTSCCEEEEEETT------EEEEECSSSSSCEEE--EESSCCCBCBCSBTEEEEEE
T ss_pred             hhhccccceEEEECCHHHHHHHHHHHhCCEEeeccCC------EEEEEeCCCCcEEEE--EeCCCCCcCCCCCcceEEEE
Confidence            4689999999999999999999999999999876421      233333332222332  222111111223 3589999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      |.|+|   ++++.++|+++|+.+... .+...  ...+||+||+|++|||....
T Consensus       221 f~v~d~~~l~~~~~~L~~~G~~~~~~-~~r~~--~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          221 WRANDDEDQLDWQRYIASHGYGVTPV-RDRNY--FNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             EEESSHHHHHHHHHHHHHTTCCCCCC-EECSS--SEEEEEECTTSCEEEEEESC
T ss_pred             EEcCCHHHHHHHHHHHHHCCCCcccc-ccCCc--EEEEEEECCCCcEEEEEeCC
Confidence            99998   667899999999985432 33322  23589999999999999874

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.55  E-value=1.1e-13  Score=116.57  Aligned_cols=120  Identities=18%  Similarity=0.271  Sum_probs=87.0

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeec---CCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV---PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+.+++|+.|.|+|++++.+||+++|||++......   ++......++..+.....  +.+...  +    ...+++|+
T Consensus       139 ~~~~l~hv~l~v~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~l~~~--~----~~~~~~hi  210 (297)
T 1lgt_A          139 GEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHT--LAIAAF--P----LPKRIHHF  210 (297)
T ss_dssp             GGGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC--C----CSSSEEEE
T ss_pred             CccccceEEEecCCHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcce--EEEEcC--C----CCCCceEE
Confidence            578999999999999999999999999998764221   111123455554332222  233321  1    13478999


Q ss_pred             EEEeCCHHHHH---HHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIATEDVYKLV---ENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~~~---~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+|++++.   ++ +++|+++...|...+.+...++||+||+||.|||+...
T Consensus       211 af~v~d~~~~~~~~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          211 MLEVASLDDVGFAFDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             EEEBSCHHHHHHHHHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             EEeCCCHHHHHHHHHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence            99999987766   89 99999988777666655555689999999999999864

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.54  E-value=6.6e-14  Score=118.49  Aligned_cols=121  Identities=13%  Similarity=0.239  Sum_probs=85.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC--CC-ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      ..+.+|+|+.|.|+|++++.+|| ++|||++......+  .+ .....++..+.....  +.+...      ....+++|
T Consensus       142 ~~~~~i~hv~l~v~D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~h  212 (305)
T 2wl9_A          142 TEGQGLGHIIIREDDVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHS--LAFGVG------PMDKRINH  212 (305)
T ss_dssp             CTTTCSCEEEECCSCHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCS--EEECCS------CCSSSEEE
T ss_pred             cCCceeeeEEEECCCHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceE--EEEecC------CCCCCceE
Confidence            35789999999999999999999 99999986532111  11 123445554332221  222211      12247899


Q ss_pred             EEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           96 FAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++|.|+|   +++++++|+++|+++...|.....+...++||+||+||+|||+...
T Consensus       213 iaf~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          213 LMIEYTHLDDLGYAHDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEEcCCHHHHHHHHHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            9999998   5668889999999988766555444445689999999999999864

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.52  E-value=1.2e-13  Score=116.64  Aligned_cols=120  Identities=13%  Similarity=0.226  Sum_probs=84.0

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC--CC-ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--EE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+.+++|+.|.|+|++++.+|| ++|||++......+  .+ .....++..+.....  +.+...      ....+++|+
T Consensus       146 ~~~~l~hv~l~v~D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~------~~~~~~~hi  216 (302)
T 2ehz_A          146 GDQGLGHCIVRQTDVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHS--IAFGAM------PAAKRLNHL  216 (302)
T ss_dssp             GGGCSCEEEECCSCHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCS--EEECSC------CCSSSEEEE
T ss_pred             CCCccceEEEEcCCHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcE--EEEecC------CCCCceeEE
Confidence            4579999999999999999999 99999986442211  11 123445554322111  222211      112478999


Q ss_pred             EEEeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+|+++   ++++|+++|+++...|...+.+...++||+||+|+.|||+...
T Consensus       217 af~v~d~~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~  271 (302)
T 2ehz_A          217 MLEYTHMEDLGYTHQQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRG  271 (302)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             EEEcCCHHHHHHHHHHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECc
Confidence            999998764   6779999999988766655544445689999999999999864

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.51  E-value=5.1e-13  Score=114.67  Aligned_cols=121  Identities=19%  Similarity=0.207  Sum_probs=84.3

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCC-CCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGP-EQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      .+.+.+++|+.|.|+|++++.+||+++|||++..+..    .  ...+..++ +.....+.+... .........++.|+
T Consensus       175 ~~~~~~l~hv~l~v~Dl~~a~~FY~~~LG~~~~~~~~----~--~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~hi  247 (338)
T 1zsw_A          175 KHQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----Q--EAIFQSIKGEAFGEIVVKYLD-GPTEKPGRGSIHHL  247 (338)
T ss_dssp             GGSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----S--EEEEESSTTCSTTCEEEEECC-SSBCBCCBTCEEEE
T ss_pred             cccCceEEEEEEEECCHHHHHHHHHHhcCCEEEeecC----C--eEEEEecCCCCceEEEEeccC-CCCCCCCCCceEEE
Confidence            4568999999999999999999999999999876642    1  23344421 110012222221 11111122468999


Q ss_pred             EEEeC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           97 AIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        97 ~~~v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +|.|+   |+++++++|+++|+.+. .+.... + ...+||+||+|+.|||++..
T Consensus       248 af~v~~~~dv~~~~~~l~~~G~~~~-~~~~~~-~-~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          248 AIRVKNDAELAYWEEQVKQRGFHSS-GIIDRF-Y-FKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCCCC-CCEECS-S-EEEEEEECTTCCEEEEEEEE
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCcee-eeeecC-c-eEEEEEECCCCCEEEEEEcC
Confidence            99998   79999999999999985 444442 3 34589999999999999864

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.50  E-value=1.6e-13  Score=105.53  Aligned_cols=119  Identities=15%  Similarity=0.129  Sum_probs=78.1

Q ss_pred             ceeEEeeeCC--ccccHHHHHhhhCCeeeeee-------ccCCcceeEEEecccCCCceeEEEeeeecCc-c-eeccC-c
Q 022871          154 LCQVMLRVGD--LGRSIKFYEKALGMKLLRTV-------DKPEYKYTLAMLGYAEEDQTTVLELTYNYGV-T-EYTKG-N  221 (291)
Q Consensus       154 ~~hv~l~v~D--~~~~~~Fy~~~lG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~-~-~~~~~-~  221 (291)
                      -.+..|.|.|  ++++++||+++|||++....       ...++......+..+    +..+.+....+. . +...+ .
T Consensus        25 ~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----g~~l~l~~~~~~~~~~~~~~~~  100 (166)
T 1xy7_A           25 EFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEG  100 (166)
T ss_dssp             EEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTS
T ss_pred             eEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEEC----CeEEEEeCCCcccCCccccCCC
Confidence            4678899999  99999999999999976432       111111222222221    223434322111 0 01110 2


Q ss_pred             ceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCccc--CCCCceEEEEECCCCCeEEEEechh
Q 022871          222 AYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSI--PGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       222 ~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~--~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ..+|++|.|+|++++++++    +++|++ +.+|...  ++  ++.++|+||+|+.|+|++...
T Consensus       101 ~g~~l~~~vdDvda~~~~l----~~~G~~-~~~~~~~~~~~--~r~~~v~DP~G~~~~l~~~~~  157 (166)
T 1xy7_A          101 SGVTFLLGTKDAEAAVAKA----VDAGAV-KVEVTEAEVEL--GFKGKVTDPFGVTWIFAEKKT  157 (166)
T ss_dssp             CCCEEEEECSCHHHHHHHH----HHTTCE-ECCCCHHHHHT--TEEEEEECTTSCEEEEEC---
T ss_pred             CcEEEEEEcCCHHHHHHHH----HHCCCE-ECCcccccCcc--cEEEEEECCCCCEEEEEeecC
Confidence            3358999999999999999    999999 8888877  77  599999999999999998654

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.50  E-value=1.7e-13  Score=118.55  Aligned_cols=117  Identities=21%  Similarity=0.160  Sum_probs=81.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.||.|.|+|++++.+||+++|||++..+..   .  .++ +....+.....+.+..       ...+++.|++|.|.
T Consensus        16 ~rl~hV~l~V~DLe~s~~FY~dvLGL~~~~~~~---~--~~~-lr~~~~~~~~~l~l~~-------~~~~gl~~~a~~v~   82 (365)
T 4ghg_A           16 LRCAYAELVVTDLAKSRNFYVDVLGLHVSYEDE---N--QIY-LRSFEEFIHHNLVLTK-------GPVAALKAMAFRVR   82 (365)
T ss_dssp             EEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS---S--EEE-EECTTCCSSCSEEEEE-------CSSCEEEEEEEEES
T ss_pred             CEEEEEEEEeCCHHHHHHHHhhCCCCEEEEEcC---C--EEE-EEeCCCCcceEEEecc-------CCCCCcceEEEEeC
Confidence            468999999999999999999999999876532   1  222 3322222233444433       12357899999998


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      + .+.++++.++|+++|+++...+.....+.++.+||+||+|+.|||+...
T Consensus        83 s-~~dLd~~~~~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~  132 (365)
T 4ghg_A           83 T-PEDVDKAEAYYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFET  132 (365)
T ss_dssp             S-HHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCB
T ss_pred             C-HHHHHHHHHHHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEe
Confidence            7 3444444455599999987765543323458899999999999998644

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.49  E-value=9.3e-13  Score=101.21  Aligned_cols=120  Identities=18%  Similarity=0.151  Sum_probs=78.1

Q ss_pred             eeeEEEEEeCC--HHHHHHHHHHhcCCEEEEeee-------cCCCceeeEEEecCCCCceeEEEeeccCCCCcccC--CC
Q 022871           23 RFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI--GT   91 (291)
Q Consensus        23 ~i~hv~l~v~d--~~~a~~fy~~~LG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~   91 (291)
                      .-.++.|.|+|  ++++++||+++|||++.....       ...+......+..++.  .+.+.-..+....+...  +.
T Consensus        24 ~~i~~~L~v~D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~--~l~l~~~~~~~~~~~~~~~~~  101 (166)
T 1xy7_A           24 TEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGS--SFVVCDVSSLPGFSTAKSEGS  101 (166)
T ss_dssp             EEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTE--EEEEEEGGGSTTCCCCCTTSC
T ss_pred             ceEEEEEEECCcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCe--EEEEeCCCcccCCccccCCCC
Confidence            44689999999  999999999999999875431       1112222333444322  22221111110001111  23


Q ss_pred             CeeEEEEEeCCHHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEeCC
Q 022871           92 GFGHFAIATEDVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        92 g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      + .+++|.|+|+++++++|+++|++ ..++.+.  ++ . ++++|+||+|+.|+|++..
T Consensus       102 g-~~l~~~vdDvda~~~~l~~~G~~-~~~~~~~~~~~-~-r~~~v~DP~G~~~~l~~~~  156 (166)
T 1xy7_A          102 G-VTFLLGTKDAEAAVAKAVDAGAV-KVEVTEAEVEL-G-FKGKVTDPFGVTWIFAEKK  156 (166)
T ss_dssp             C-CEEEEECSCHHHHHHHHHHTTCE-ECCCCHHHHHT-T-EEEEEECTTSCEEEEEC--
T ss_pred             c-EEEEEEcCCHHHHHHHHHHCCCE-ECCcccccCcc-c-EEEEEECCCCCEEEEEeec
Confidence            3 48999999999999999999999 8888777  66 4 3589999999999999865

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=99.47  E-value=4.5e-13  Score=115.83  Aligned_cols=130  Identities=17%  Similarity=0.307  Sum_probs=90.7

Q ss_pred             CCCCceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeee--cCCCceeeEEEecCCCCceeEEEeeccCC---CC---c
Q 022871           17 PKKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRD--VPEEKYSNAFLGFGPEQSHFVVELTYNYG---VT---S   86 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~   86 (291)
                      ..+.+++|+|++|.|+  |++++.+||+++|||++....+  .+.......++..++...  .+++.....   ..   .
T Consensus       152 ~~~~~~~l~Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~--~l~l~~~~~~~~~~~~~~  229 (357)
T 2r5v_A          152 GDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAV--TLTLIEPDRNADPGQIDE  229 (357)
T ss_dssp             TTCCCCEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCC--EEEEEEECTTSBCCHHHH
T ss_pred             CCCCcceEeEEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCE--EEEEeeecCCCCCchhHH
Confidence            3457899999999999  9999999999999999986542  222233445555443332  344433221   11   1


Q ss_pred             c---cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccC---------CCc-------eEEEEEECCCCCEEEEEeC
Q 022871           87 Y---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK---------GGT-------THIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        87 ~---~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~---------~g~-------~~~~~~~dp~G~~iel~~~  147 (291)
                      +   ..+.|++||||.|+|+++++++|+++|+.+...|....         .+.       ..++|++||+|++++|...
T Consensus       230 ~~~~~~~~g~~Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~  309 (357)
T 2r5v_A          230 FLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTA  309 (357)
T ss_dssp             HHHHHTSSEEEEEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBC
T ss_pred             HHHhcCCCCccEEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEcc
Confidence            1   13568999999999999999999999999877663210         000       0148899999999999986


Q ss_pred             C
Q 022871          148 G  148 (291)
Q Consensus       148 ~  148 (291)
                      +
T Consensus       310 ~  310 (357)
T 2r5v_A          310 S  310 (357)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.46  E-value=1.9e-12  Score=109.00  Aligned_cols=169  Identities=11%  Similarity=0.068  Sum_probs=104.1

Q ss_pred             CeeEEEEEeC-CHHHHHHHHHHcCCeEecCCccc--CCCceEEEEEECCCCCEEEEEeCCC---CCCCceeEEeeeCCcc
Q 022871           92 GFGHFAIATE-DVYKLVENIRAKGGNVTREPGPL--KGGTTHIAFVKDPDGYIFELIQRGP---TPEPLCQVMLRVGDLG  165 (291)
Q Consensus        92 g~~~i~~~v~-d~~~~~~~l~~~G~~~~~~~~~~--~~g~~~~~~~~dp~G~~iel~~~~~---~~~~~~hv~l~v~D~~  165 (291)
                      |+..+.+.|. +=....+-+++.|++....-...  ..|.         +-..+.+....-   .+....++.+.|.|++
T Consensus       125 g~~~i~~~v~~~N~~s~~ly~k~GF~~~g~~~~~~~~~g~---------d~~~~~l~~~~~~~~~~~~~~~~~l~v~D~~  195 (301)
T 2zw5_A          125 GLDRVEAWIEAGNRRSLAVAARVGLTERARLAQHYPHRPG---------PHEMVVLGKARAEEPLTTLAVITELPVRDVA  195 (301)
T ss_dssp             CCSEEEEEEESSCHHHHHHHHHTTCEEEEEEEECCTTSSS---------CEEEEEEEEESSCCSCEEEEEEEEEEESCHH
T ss_pred             CccEEEEEeCCCCHHHHHHHHHcCCcCcceehhhcccCCC---------CeEEEEEeHHHhhhhcccceeEEEEEeCCHH
Confidence            5667777763 22344566778888765421110  1111         112333333221   1223457889999999


Q ss_pred             ccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec-chhhhHHHHHHHH
Q 022871          166 RSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD-DVYKSAEVVNLVT  244 (291)
Q Consensus       166 ~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~-di~~~~~~l~~~~  244 (291)
                      ++.+||+++|||++......+ +.+.  .+..+.......+.+.. .+.   ..+....+++|.|+ |++++++++    
T Consensus       196 ~a~~FY~~~lG~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~v~~dvd~~~~~~----  264 (301)
T 2zw5_A          196 ATLRLVEAALGARTAFAIGDP-PEFA--EAALTPWSAGPRFRLAA-VPG---PGPVEPVRLHLDAAGTADSLHRRA----  264 (301)
T ss_dssp             HHHHHHHHHSCCEEEEEEETT-EEEE--EEESSSSSSSSEEEEEE-CCC---SSCCCCCEEEEEEESCHHHHHHHH----
T ss_pred             HHHHHHHHhcCCeEeeecCCC-ccEE--EEEcCCCcccccccccc-CCC---cCCCCceEEEEEcCccHHHHHHHH----
Confidence            999999999999976433221 2233  23322211011222211 110   11224568999999 999999999    


Q ss_pred             HHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          245 QELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       245 ~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +++|+++..+|...++ |.+.++|+|||||.|+|.+.
T Consensus       265 ~~~G~~~~~~~~~~~~-g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          265 VDAGARVDGPPVRRPW-GRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHTTCCEEEEEEECTT-SCEEEEEECTTSCEEEEEEC
T ss_pred             HHcCCccccCcccCCC-cceEEEEECCCCCEEEeeCC
Confidence            9999999988888776 35899999999999999874

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.44  E-value=8.5e-12  Score=94.05  Aligned_cols=121  Identities=15%  Similarity=0.180  Sum_probs=81.0

Q ss_pred             eEEEEEeC-CHHHHHHHHHHhcCCEEEEeeecCC------------CceeeEEEecCCCCceeEEEeeccCCCCcccCCC
Q 022871           25 LHAVYRVG-DLDRTIKFYTECFGMKLLRKRDVPE------------EKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT   91 (291)
Q Consensus        25 ~hv~l~v~-d~~~a~~fy~~~LG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (291)
                      .+..|.|. |.++|++||+++||+++.......+            +....+.+.+++.  .+.+  .............
T Consensus         5 ~~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~--~l~~--~d~~~~~~~~~~~   80 (149)
T 1u6l_A            5 IVPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF--ALMA--SDNHPAYPYEGIK   80 (149)
T ss_dssp             EEEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE--EEEE--EECCTTSCCCCCC
T ss_pred             EEEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCE--EEEE--EcCCCccCCCCCC
Confidence            34889999 9999999999999999876432111            2223333444322  2222  1111100111223


Q ss_pred             CeeEEEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Q 022871           92 GFGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPE  152 (291)
Q Consensus        92 g~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~  152 (291)
                      | .+++|.|+|   +++++++|. +|+++..++.+.++|.+ +++|+||+|+.|+|.+.....+
T Consensus        81 g-~~l~~~v~d~~evd~~~~~l~-~Gg~i~~p~~~~~wG~r-~~~v~Dp~G~~w~l~~~~~~~~  141 (149)
T 1u6l_A           81 G-CSISLNVDSKAEAERLFNALA-EGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQDREG  141 (149)
T ss_dssp             S-EEEEEECSSHHHHHHHHHHHH-TTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESCC---
T ss_pred             c-eEEEEEcCCHHHHHHHHHHHH-CCCEEeecccccCcccc-eEEEECCCCCEEEEEEecccCC
Confidence            4 589999998   789999985 89999999888888754 5889999999999998765443

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.43  E-value=2.6e-12  Score=96.90  Aligned_cols=117  Identities=16%  Similarity=0.127  Sum_probs=76.4

Q ss_pred             eEEeeeC-CccccHHHHHhhhCCeeeeeeccCC------------cceeEEEecccCCCceeEEEeeeecCcceeccCcc
Q 022871          156 QVMLRVG-DLGRSIKFYEKALGMKLLRTVDKPE------------YKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNA  222 (291)
Q Consensus       156 hv~l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~  222 (291)
                      ...|.|. |++++++||+++||+++.......+            +......+..+    ...+.+....+....+...+
T Consensus         6 ~p~L~v~~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~l~~~d~~~~~~~~~~~g   81 (149)
T 1u6l_A            6 VPYLIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYPYEGIKG   81 (149)
T ss_dssp             EEEEEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSCCCCCCS
T ss_pred             EEEEEECCCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEEC----CEEEEEEcCCCccCCCCCCc
Confidence            4678888 9999999999999999765421111            11112222221    12333332211101111223


Q ss_pred             eeEEEEEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          223 YAQVAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~h~~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                       ++++|.|+|   ++++++++    + +|++++.+|...++ |.+.++++||+|+.|+|++...
T Consensus        82 -~~l~~~v~d~~evd~~~~~l----~-~Gg~i~~p~~~~~w-G~r~~~v~Dp~G~~w~l~~~~~  138 (149)
T 1u6l_A           82 -CSISLNVDSKAEAERLFNAL----A-EGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCEQD  138 (149)
T ss_dssp             -EEEEEECSSHHHHHHHHHHH----H-TTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEESCC
T ss_pred             -eEEEEEcCCHHHHHHHHHHH----H-CCCEEeecccccCc-ccceEEEECCCCCEEEEEEecc
Confidence             689999998   55666665    6 79999999999888 4588999999999999998543

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.42  E-value=1.6e-12  Score=106.44  Aligned_cols=113  Identities=14%  Similarity=0.197  Sum_probs=78.6

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      ...++.||.|.|+|++++.+||+++|||++.....   . .  +.+..+    ...+.+.....     .+.+..|++|.
T Consensus        23 ~~~~l~hV~L~V~Dle~s~~FY~~vLGl~~~~~~~---~-~--~~L~~g----~~~l~l~~~~~-----~~~~~~hiaf~   87 (252)
T 3pkv_A           23 HMTSIKQLTLYTAELDRMLAFYTNMLGAQHVHEQA---D-A--FTIQLG----VSQIQFRAAAD-----GTKPFYHIAIN   87 (252)
T ss_dssp             --CCEEEEEEEESCHHHHHHHHHHHHCGGGEEECS---S-E--EEEEET----TEEEEEEECCT-----TCCCCCEEEEE
T ss_pred             cCceEEEEEEEeCCHHHHHHHHHHhcCCEEEEccC---C-E--EEEEeC----CEEEEEEECCC-----CCCCeeEEEEE
Confidence            35689999999999999999999999999876532   1 2  233322    24455543221     23467899999


Q ss_pred             ecc--hhhhHHHHHHHHHHhCCeeecC-Ccc----cCCCCceEEEEECCCCCeEEEEechh
Q 022871          230 TDD--VYKSAEVVNLVTQELGGKITRQ-PGS----IPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       230 v~d--i~~~~~~l~~~~~~~G~~~~~~-p~~----~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      |++  +++++++|    +++ +++..+ +..    ..+ +++.+||+|||||.|||+++..
T Consensus        88 V~~~dld~~~~rL----~~~-v~~~~~~~~~~~~~~~~-g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A           88 IAANHFQEGKAWL----SGF-GELLTENDEDQAYFPFF-NAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             ECTTCHHHHHHHH----TTS-SCCCCBTTBSCEEETTT-TEEEEEEECTTCCEEEEEEESS
T ss_pred             ecHHHHHHHHHHH----Hhc-ceEeccCCccccccccC-CeEEEEEECCCCCEEEEEEeCC
Confidence            864  55666666    988 887652 221    233 4689999999999999999754

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.41  E-value=4.4e-12  Score=94.12  Aligned_cols=114  Identities=13%  Similarity=0.070  Sum_probs=76.9

Q ss_pred             EEeeeC--CccccHHHHHhhh-CCeeeeeeccC------CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEE
Q 022871          157 VMLRVG--DLGRSIKFYEKAL-GMKLLRTVDKP------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~--D~~~~~~Fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      ..|.+.  |++++.+||+++| ||++.......      ++......+..+    +..+.+.......... ....+.++
T Consensus         9 ~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~----g~~~~~~~~~~~~~~~-~~~~~~l~   83 (136)
T 1u7i_A            9 PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFD-FTPAFSFF   83 (136)
T ss_dssp             EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCC-CCTTEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEEC----CEEEEEECCCCCCCCC-CCCceEEE
Confidence            668886  9999999999999 99976421111      122222222221    1222222221001111 12346899


Q ss_pred             EEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      |.|+|   ++++++++    + +|++++.+|...+++ .++++++||+|+.|+|+..
T Consensus        84 ~~v~d~~evd~~~~~l----~-~Gg~v~~p~~~~~~G-~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           84 VDCESNAQIERLAEAL----S-DGGKALMPLGDYGFS-QRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EECCCHHHHHHHHHHH----H-TTSEEEEEEECCSSS-SEEEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCEEecccccCCCc-ceEEEEECCCCCEEEEEec
Confidence            99999   88888888    8 999999999999884 5899999999999999874

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.37  E-value=3.3e-11  Score=89.34  Aligned_cols=118  Identities=17%  Similarity=0.257  Sum_probs=80.6

Q ss_pred             eeeeEEEEEeC--CHHHHHHHHHHhc-CCEEEEeeecC------CCceeeEEEecCCCCceeEEEeeccCCCCcccCCCC
Q 022871           22 RRFLHAVYRVG--DLDRTIKFYTECF-GMKLLRKRDVP------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTG   92 (291)
Q Consensus        22 ~~i~hv~l~v~--d~~~a~~fy~~~L-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g   92 (291)
                      +++. ..|.+.  |.++|++||+++| |+++.......      ++....+.+.+++.  .+.+. ...... ....+.+
T Consensus         5 ~~i~-~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~--~~~~~-~~~~~~-~~~~~~~   79 (136)
T 1u7i_A            5 ARVR-PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ--SVHCI-DSHVRH-AFDFTPA   79 (136)
T ss_dssp             CEEE-EEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEEE-EESSCC-SCCCCTT
T ss_pred             ccce-EEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCE--EEEEE-CCCCCC-CCCCCCc
Confidence            4555 678886  9999999999999 99987531111      12333344554332  22211 111001 1112223


Q ss_pred             eeEEEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           93 FGHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        93 ~~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                       ..++|.|+|   +++++++|. +|+++..++.+.++|.+ +++|+||+|+.|+|...
T Consensus        80 -~~l~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~-~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           80 -FSFFVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             -EEEEEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEEC
T ss_pred             -eEEEEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcce-EEEEECCCCCEEEEEec
Confidence             478999999   999999999 99999999999998765 48899999999999874

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.36  E-value=3.6e-11  Score=101.04  Aligned_cols=119  Identities=13%  Similarity=0.046  Sum_probs=82.3

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      .....++.+.|+|++++.+||+++|||++......+ +.  ...+..++......+.+...    +...+....+++|.|
T Consensus       181 ~~~~~~~~l~v~D~~~a~~FY~~~lG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~v  253 (301)
T 2zw5_A          181 TTLAVITELPVRDVAATLRLVEAALGARTAFAIGDP-PE--FAEAALTPWSAGPRFRLAAV----PGPGPVEPVRLHLDA  253 (301)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHHSCCEEEEEEETT-EE--EEEEESSSSSSSSEEEEEEC----CCSSCCCCCEEEEEE
T ss_pred             ccceeEEEEEeCCHHHHHHHHHHhcCCeEeeecCCC-cc--EEEEEcCCCccccccccccC----CCcCCCCceEEEEEc
Confidence            344568899999999999999999999987543321 21  23454443111011111110    001111345789999


Q ss_pred             C-CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          101 E-DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       101 ~-d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      + |++++++++.++|+++..+|...++|.. .++|+||+||.|+|.+.
T Consensus       254 ~~dvd~~~~~~~~~G~~~~~~~~~~~~g~~-~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          254 AGTADSLHRRAVDAGARVDGPPVRRPWGRS-EFVITLPEGHELTVSAP  300 (301)
T ss_dssp             ESCHHHHHHHHHHTTCCEEEEEEECTTSCE-EEEEECTTSCEEEEEEC
T ss_pred             CccHHHHHHHHHHcCCccccCcccCCCcce-EEEEECCCCCEEEeeCC
Confidence            8 9999999999999999888877777655 48899999999999874

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=99.30  E-value=1.4e-11  Score=107.22  Aligned_cols=126  Identities=17%  Similarity=0.215  Sum_probs=91.0

Q ss_pred             CCCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc--ceeEEEecccCCCceeEEEeeeecCcce----------e
Q 022871          150 TPEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------Y  217 (291)
Q Consensus       150 ~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~  217 (291)
                      ...++.||.|.|+|++++.+||+++|||++........+  ......++.+    ...++|..+..+..          .
T Consensus        19 ~i~~i~hV~i~V~D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g----~~~l~l~~~~~~~~~~~~~~~~~~~   94 (381)
T 1t47_A           19 PVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVA   94 (381)
T ss_dssp             CCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHH
T ss_pred             cCceEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecC----CEEEEEecCCCCCCcchhHHHHHHH
Confidence            346799999999999999999999999998765321111  2234444422    35566665422211          0


Q ss_pred             ccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccC--CCCceEEEEECCCCCeEEEEechh
Q 022871          218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       218 ~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ..++++.|++|.|+|++++++++    +++|+++..+|....  .+..+.++++||+|+.++|+++..
T Consensus        95 ~~g~gv~~iaf~V~D~~~~~~~l----~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~~  158 (381)
T 1t47_A           95 EHGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  158 (381)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             hcCCceEEEEEEECCHHHHHHHH----HHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecCC
Confidence            13678999999999999999999    999999988876421  112357889999999999999754

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.26  E-value=2e-10  Score=85.22  Aligned_cols=118  Identities=12%  Similarity=0.166  Sum_probs=79.3

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhc-CCEEEEeeecC------CCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECF-GMKLLRKRDVP------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGF   93 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~L-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   93 (291)
                      ++++...-+.+.|.++|++||+++| |+++.......      ++....+.+.+++.  .+...  . ..+. .  +.. 
T Consensus         3 ~~~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~--~~m~~--d-~~~~-~--~~~-   73 (139)
T 1tsj_A            3 IPKITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ--VFMAI--D-ANSG-T--ELP-   73 (139)
T ss_dssp             CCSEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE--EEEEE--C-----------C-
T ss_pred             CCceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCE--EEEEE--C-CCCC-C--Cce-
Confidence            4566655555569999999999999 99987532221      23344444555432  12111  1 1111 1  112 


Q ss_pred             eEEEEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           94 GHFAIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        94 ~~i~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      ..+++.|+|   +++++++|. +|+++..++.+.++|.+ +.+|+||+|+.|+|.....
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEECC-
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCce-EEEEECCCCCEEEEeeccc
Confidence            468899987   788899998 79999999999999765 4899999999999998653

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=99.23  E-value=7.3e-11  Score=101.90  Aligned_cols=129  Identities=15%  Similarity=0.160  Sum_probs=84.8

Q ss_pred             CCCceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCC--CceeeEEEecCCCCceeEEEeecc-CC-CCc-----
Q 022871           18 KKDKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPE--EKYSNAFLGFGPEQSHFVVELTYN-YG-VTS-----   86 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-----   86 (291)
                      ...+.+|+|+++.|+  |++++.+||+++|||++......+.  .+.....+....+..  .+++..+ .. ..+     
T Consensus       153 ~~~i~~idHv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~--~i~L~~~~~~~~~~~~~~~  230 (357)
T 1cjx_A          153 GAGLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMI--RIPLNEESSKGAGQIEEFL  230 (357)
T ss_dssp             TTSEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSC--EEEEEEECTTCCSHHHHHH
T ss_pred             CCCeeEECceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCE--EEEEeeecCCCCChHHHhH
Confidence            356899999999999  9999999999999999987654322  111112222222222  3444432 11 111     


Q ss_pred             -ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEec-CCcc---------cCCCce-------EEEEEEC----CCCCEEEE
Q 022871           87 -YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTR-EPGP---------LKGGTT-------HIAFVKD----PDGYIFEL  144 (291)
Q Consensus        87 -~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~-~~~~---------~~~g~~-------~~~~~~d----p~G~~iel  144 (291)
                       ...+.|++|+||.|+|+++++++|+++|+++.. .|..         ...+..       .+++-+|    |+|+++++
T Consensus       231 ~~~~g~g~~HiAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqi  310 (357)
T 1cjx_A          231 MQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQI  310 (357)
T ss_dssp             HHHTSSBCCEEEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEE
T ss_pred             HhcCCCCeeEEEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEE
Confidence             124668999999999999999999999999877 5511         111111       0245577    77888888


Q ss_pred             EeCC
Q 022871          145 IQRG  148 (291)
Q Consensus       145 ~~~~  148 (291)
                      ...+
T Consensus       311 ft~~  314 (357)
T 1cjx_A          311 FSET  314 (357)
T ss_dssp             EBCC
T ss_pred             eccC
Confidence            7654

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=99.22  E-value=6.2e-11  Score=104.26  Aligned_cols=124  Identities=15%  Similarity=0.116  Sum_probs=89.9

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC--CcceeEEEecccCCCceeEEEeeeecCcc--------------
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--EYKYTLAMLGYAEEDQTTVLELTYNYGVT--------------  215 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~l~~~~~~~--------------  215 (291)
                      .++.||.|.|+|++++.+||+++|||++.......  ......+.++.+    ...+.|..+..+.              
T Consensus        24 ~~i~HV~i~V~Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g----~~~l~L~~~~~~~~~~~~~~~~~~~p~   99 (424)
T 1sqd_A           24 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG----DLRFLFTAPYSPSLSAGEIKPTTTASI   99 (424)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET----TEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CeEEEEEEEECCHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCC----CEEEEEecCCCCccccccccccccccc
Confidence            46899999999999999999999999987654322  112333444421    3566666542221              


Q ss_pred             -----e------eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          216 -----E------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       216 -----~------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                           .      ...++++.|++|.|+|++++++++    +++|++++.+|....+ ..+...+++|+|+.++|+++...
T Consensus       100 ~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l----~a~Ga~~~~~P~~~~~-~~~~~~i~~~Gg~~~~lvd~~g~  174 (424)
T 1sqd_A          100 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAE  174 (424)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC
T ss_pred             ccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHH----HHcCCEEeecCcCCCC-ceEEEEEEcCCCcEEEEEecCCC
Confidence                 0      123468999999999999999999    9999999888865433 24677788888999988887654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=99.18  E-value=3.8e-10  Score=97.78  Aligned_cols=104  Identities=19%  Similarity=0.259  Sum_probs=74.6

Q ss_pred             CCCCceeeeEEEEEeCC--HHHHHHHHHHhcCCEEEEeee---cC--CCceeeEEEecCCCCceeEEEeeccCC--CC--
Q 022871           17 PKKDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRD---VP--EEKYSNAFLGFGPEQSHFVVELTYNYG--VT--   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d--~~~a~~fy~~~LG~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--   85 (291)
                      +...+.+|+|+++.|+|  ++++.+||+++|||+.....+   ..  ..+.....+..++..  +.+++..+..  ..  
T Consensus       167 ~~~~l~~IDHv~i~V~~~~l~~a~~fY~~~lGf~~~~~~d~~~i~~~~~gl~s~~~~~~~g~--v~i~L~ep~~~~~~s~  244 (393)
T 3isq_A          167 PKCSLEMIDHIVGNQPDQEMVSASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEES--IKMPINEPAPGKKKSQ  244 (393)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEEEEECTTTSBCSSCEEEEEEEECTTSS--CEEEEEEEECCSBCCH
T ss_pred             CCCCeeEEeEEEEecCccHHHHHHHHHHHHhCCEEeccccccccccCCCcEEEEEEECCCCC--EEEEEecCCCCCCCCH
Confidence            44579999999999998  999999999999999887643   11  123344444433333  3444443221  11  


Q ss_pred             --cc---cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCc
Q 022871           86 --SY---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 --~~---~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                        .+   ..|.|++||||.|+|+.+++++|+++|+.+...|.
T Consensus       245 I~~fL~~~~G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~l~~P~  286 (393)
T 3isq_A          245 IQEYVDYNGGAGVQHIALKTEDIITAIRHLRERGLEFLSVPS  286 (393)
T ss_dssp             HHHHHHHHTSSEEEEEEEEESCHHHHHHHHHHTTCCBCCCCH
T ss_pred             HHHHHHHcCCCCcceEEEEcCCHHHHHHHHHHcCCccCCCCc
Confidence              11   25789999999999999999999999999876653

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.18  E-value=3.1e-10  Score=84.19  Aligned_cols=116  Identities=10%  Similarity=0.089  Sum_probs=71.2

Q ss_pred             CceeEEeeeCCccccHHHHHhhh-CCeeeeeeccC------CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKAL-GMKLLRTVDKP------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ  225 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~l-G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h  225 (291)
                      ++...-+.+.|.+++.+||+++| |+++.......      ++......+..++    ..+-+.. ..+ . . +.. ..
T Consensus         5 ~i~p~l~~~~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~----~~~m~~d-~~~-~-~-~~~-~s   75 (139)
T 1tsj_A            5 KITTFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNG----QVFMAID-ANS-G-T-ELP-IS   75 (139)
T ss_dssp             SEEEEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETT----EEEEEEC-----------C-CC
T ss_pred             ceeEEEEECCCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECC----EEEEEEC-CCC-C-C-Cce-EE
Confidence            34433334459999999999999 99976432211      1222222232211    1221111 111 1 1 112 56


Q ss_pred             EEEEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          226 VAISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       226 ~~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      +++.|+|   ++++.++|    . +|++++.+|...+| |.+.++++||+|+.|+|.....
T Consensus        76 l~~~~~d~~evd~~~~~l----~-~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~~~  130 (139)
T 1tsj_A           76 LFVTVKDTIEMERLFNGL----K-DEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALPEE  130 (139)
T ss_dssp             EEEECSSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEECC-
T ss_pred             EEEECCCHHHHHHHHHHH----h-CCCEEeecccccCC-CceEEEEECCCCCEEEEeeccc
Confidence            8899987   44445554    7 79999999999998 4699999999999999997543

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.16  E-value=2e-09  Score=82.29  Aligned_cols=118  Identities=16%  Similarity=0.188  Sum_probs=82.5

Q ss_pred             eeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecC--------------CCceeeEEEecCCCCceeEEEeeccCCCCcccC
Q 022871           24 FLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVP--------------EEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI   89 (291)
Q Consensus        24 i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (291)
                      -....|.++|.++|++||+++||++++......              ++....+.+.+++.  .+.+  ....+. .+..
T Consensus        26 ~i~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~--~lm~--~D~~g~-~~~~  100 (172)
T 3l20_A           26 ALFPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGV--KVLC--SDSFGR-ADKI  100 (172)
T ss_dssp             EEEEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTE--EEEE--EECTTC-CCCC
T ss_pred             cEEEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCE--EEEE--ECCCCC-CCCC
Confidence            356777788999999999999999987654321              23445566666532  2222  111111 2223


Q ss_pred             CCCeeEEEEEe--------CCHHHHHHHHHHcC-CeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           90 GTGFGHFAIAT--------EDVYKLVENIRAKG-GNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        90 ~~g~~~i~~~v--------~d~~~~~~~l~~~G-~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +.+ ..+++.+        +|+++++++|.+.| +++..++.+.++|.+. ..|+||+|+.|.|....
T Consensus       101 ~~~-~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~-g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          101 NNG-ISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKM-GVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             CSS-EEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEE-EEEECTTSCEEEEEEEC
T ss_pred             CCc-EEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEE-EEEECCCCCEEEEEeCC
Confidence            333 3456666        58899999999999 7999999999988764 88999999999998654

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=99.11  E-value=4.9e-10  Score=98.33  Aligned_cols=103  Identities=19%  Similarity=0.311  Sum_probs=74.0

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC-----ceeeEEEecCCCCceeEEEeeccC----CC---
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-----KYSNAFLGFGPEQSHFVVELTYNY----GV---   84 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~---   84 (291)
                      ....+.+|+|+++.|+|++++++||+++|||++..+...++.     +....++..++..  +.+++..+.    ..   
T Consensus       193 ~~~~~~~idHv~i~V~dl~~a~~FY~~vLGf~~~~~~~~~d~~~~~~gl~s~~l~~~~g~--i~l~l~e~~~~~~~~s~i  270 (418)
T 1sp8_A          193 ADYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSEN--VLLPLNEPVHGTKRRSQI  270 (418)
T ss_dssp             CCCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSC--CEEEEEEECCCSSSCCHH
T ss_pred             CCCCcceEeeEEEecCCHHHHHHHHHHHcCCEEEEEecccccccccccceEEEEEcCCCc--EEEEEeecccccCCCcch
Confidence            445689999999999999999999999999999877643221     2344455543333  344444331    11   


Q ss_pred             Ccc---cCCCCeeEEEEEeCCHHHHHHHHHH----cCCeEecCC
Q 022871           85 TSY---DIGTGFGHFAIATEDVYKLVENIRA----KGGNVTREP  121 (291)
Q Consensus        85 ~~~---~~~~g~~~i~~~v~d~~~~~~~l~~----~G~~~~~~~  121 (291)
                      .++   ..|.|++||||.|+|+.+++++|++    +|+.+...|
T Consensus       271 ~~fl~~~~G~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~P  314 (418)
T 1sp8_A          271 QTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  314 (418)
T ss_dssp             HHHHHHHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hhhhhccCCCCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCC
Confidence            112   2577999999999999999999999    799887654

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.10  E-value=9.7e-10  Score=81.30  Aligned_cols=114  Identities=14%  Similarity=0.106  Sum_probs=73.3

Q ss_pred             eEEeeeC-CccccHHHHHhhhC-Ceeeeeecc------CCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEE
Q 022871          156 QVMLRVG-DLGRSIKFYEKALG-MKLLRTVDK------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       156 hv~l~v~-D~~~~~~Fy~~~lG-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      .-.|.+. |.+++.+||+++|| .++......      .++......+..+    +..+-+....+......+ ....++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~----g~~lm~~d~~~~~~~~~~-~~~~l~   86 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLN----GQEFMCIDSYVNHNFTFT-PAMSLY   86 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEECSSCCSCCCC-TTSCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEEEcCCCCCCCCCC-CCEEEE
Confidence            3456777 89999999999999 565432111      1222323333322    223333322222111122 335799


Q ss_pred             EEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          228 ISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       228 ~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +.|+|   ++++.++|    . .|++++.+|...++ +.+.++++||+|+.|.|.-
T Consensus        87 l~~~d~~evd~~~~~l----~-~Gg~v~~p~~~~~w-g~~~~~~~Dp~G~~W~i~~  136 (138)
T 3oms_A           87 VTCETEEEIDTVFHKL----A-QDGAILMPLGSYPF-SKKFGWLNDKYGVSWQLTL  136 (138)
T ss_dssp             EEESSHHHHHHHHHHH----H-TTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEE
T ss_pred             EEcCCHHHHHHHHHHH----H-cCCeEecCcccccC-CcEEEEEECCCCCEEEEEe
Confidence            99999   66666665    6 58899999999998 4689999999999999974

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.09  E-value=1.2e-09  Score=83.59  Aligned_cols=116  Identities=14%  Similarity=0.125  Sum_probs=74.9

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccC--------------CcceeEEEecccCCCceeEEEeeeecCcceeccCc
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKP--------------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGN  221 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~  221 (291)
                      .-.|.+.|.+++.+||+++||.++.......              ++......+..+    +..|-+....+. ....++
T Consensus        28 ~PyL~f~~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~----g~~lm~~D~~g~-~~~~~~  102 (172)
T 3l20_A           28 FPYIAFENSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVL----GVKVLCSDSFGR-ADKINN  102 (172)
T ss_dssp             EEEEEESCHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEET----TEEEEEEECTTC-CCCCCS
T ss_pred             EEEEEECCHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEEC----CEEEEEECCCCC-CCCCCC
Confidence            4457778999999999999999976543221              122222333322    233333332211 112222


Q ss_pred             ceeEEEEEe--------cchhhhHHHHHHHHHHhC-CeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          222 AYAQVAIST--------DDVYKSAEVVNLVTQELG-GKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       222 ~~~h~~~~v--------~di~~~~~~l~~~~~~~G-~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      + ..+++.+        +|+++++++|    .+.| ++++.+|...+| +.++++++||+|+.|+|...+
T Consensus       103 ~-~sl~l~~~~~d~~~~~dvd~~~~~l----~~~G~a~v~~p~~~~~w-G~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A          103 G-ISLLIDYDVNNKEDADKVEAFYEQI----KDHSSIEIELPFADQFW-GGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             S-EEEEEEEETTCHHHHHHHHHHHHHH----TTCTTCEEEEEEEECTT-SSEEEEEECTTSCEEEEEEEC
T ss_pred             c-EEEEEEEccCccCcHHHHHHHHHHH----HhCCCceEecCccccCC-CcEEEEEECCCCCEEEEEeCC
Confidence            2 3466766        4566666666    9999 699999999998 458999999999999997643

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.06  E-value=7.6e-09  Score=76.45  Aligned_cols=115  Identities=12%  Similarity=0.239  Sum_probs=78.4

Q ss_pred             EEEEEeC-CHHHHHHHHHHhcC-CEEEEeeec------CCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           26 HAVYRVG-DLDRTIKFYTECFG-MKLLRKRDV------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        26 hv~l~v~-d~~~a~~fy~~~LG-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ...|.++ |.++|++||+++|| .++......      .++...++.+.+++.  .+.+  ........+..+++ ..++
T Consensus        12 ~P~L~f~g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~--~lm~--~d~~~~~~~~~~~~-~~l~   86 (138)
T 3oms_A           12 TTFLMFEGKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQ--EFMC--IDSYVNHNFTFTPA-MSLY   86 (138)
T ss_dssp             CEEEEESSCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEE--EECSSCCSCCCCTT-SCEE
T ss_pred             EEEEEECCCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCE--EEEE--EcCCCCCCCCCCCC-EEEE
Confidence            4566677 89999999999999 566433211      234555666766532  2222  11111111222323 4689


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +.|+|   +++++++|. +|.++..++.+.++|.+ +..++||+|+.|.|...
T Consensus        87 l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~-~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           87 VTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKK-FGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEEC
T ss_pred             EEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcE-EEEEECCCCCEEEEEeC
Confidence            99999   999999995 68899999999998765 58899999999998753

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=98.76  E-value=5.2e-07  Score=74.10  Aligned_cols=158  Identities=14%  Similarity=0.151  Sum_probs=102.0

Q ss_pred             ccCCCCCCceeeeEEEEEeCCHHHHHHHHHHhcC-----CEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC----
Q 022871           13 LLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFG-----MKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG----   83 (291)
Q Consensus        13 ~~~~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----   83 (291)
                      .+++-..|+.+|+|+++.|++++        .||     |++...+..+..+.....+.++..    +||+..-.+    
T Consensus        14 ~~~~~~~M~~~lDHlVi~v~~l~--------~lG~~~~~f~~~~GG~H~~~GT~N~Li~fdg~----YLElIai~~~~~~   81 (274)
T 3p8a_A           14 LVPRGSHMILKFDHIIHYIDQLD--------RFSFPGDVIKLHSGGYHHKYGTFNKLGYINEN----YIELLDVENNEKL   81 (274)
T ss_dssp             -------CCCEEEEEEEECTTGG--------GCCCGGGSSCCEEEEEETTTTEEEEEEECSSS----EEEEEEESCHHHH
T ss_pred             cccCCcCccccCCEEEEEeccHH--------HcCCccceEEeCCCccCCCCCCEEEEEeeCCE----EEEEEeecCcccc
Confidence            34566678999999999999874        467     998887777666666777776332    333332110    


Q ss_pred             -------CC--cc-------cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecC---CcccCCCc---eEEEEEECCC--C
Q 022871           84 -------VT--SY-------DIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE---PGPLKGGT---THIAFVKDPD--G  139 (291)
Q Consensus        84 -------~~--~~-------~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~---~~~~~~g~---~~~~~~~dp~--G  139 (291)
                             ..  .+       ..++|+.++++.++|+++..++|.++|+.+...   .+..++|.   ...++..|+.  +
T Consensus        82 ~~~~~~~~~~~~f~~~~~~~~~geGl~~~alrt~Di~a~~a~l~~~Gl~~~~p~~~sR~~pDG~~l~W~l~~~~d~~~~~  161 (274)
T 3p8a_A           82 KKMAKTIEGGVAFATQIVQEKYEQGFKNICLHTNDIEAVKNKLQSEQVEVVGPIQMERDTHKDGKVKWQLLYIMNQDDDE  161 (274)
T ss_dssp             HHHTTSTGGGTCTTTHHHHTTTCCEEEEEEEECSCHHHHHHHHHTTTCEEEEEEEEEECCCC--CEEEEEEEEECSSCCS
T ss_pred             cccccccCccchHHHHhhhhccCCCeEEEEEecCCHHHHHHHHHHcCCCcCCCccccccCCCCCEEEEEEEeccCCCccC
Confidence                   01  11       246799999999999999999999999875321   22344553   2334556664  2


Q ss_pred             C-EEEEEeCCC-----------C---CCCceeEEeeeCCccccHHHHHhhhCCeeeee
Q 022871          140 Y-IFELIQRGP-----------T---PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRT  182 (291)
Q Consensus       140 ~-~iel~~~~~-----------~---~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~  182 (291)
                      . .--|++...           .   ...+.+|.+.+.|++++.+.|+++||......
T Consensus       162 ~~~PFfiqw~~~~~~r~~~~~~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          162 IKPPFFIQWEESDSMRTKKLQKYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             SCCCEEEEESSCTTHHHHHHTTTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             CCccEEEecCCCccccccccccCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            2 223344321           1   23588999999999999999999999987643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.69  E-value=1.7e-07  Score=74.52  Aligned_cols=115  Identities=17%  Similarity=0.143  Sum_probs=71.1

Q ss_pred             ceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEE---EEEe
Q 022871          154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQV---AIST  230 (291)
Q Consensus       154 ~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~---~~~v  230 (291)
                      .....|.|.|.+++.+||+++|||++.....      +...++....  ...+.+-... ........|.-|+   ++.|
T Consensus        11 ~~~p~LrV~nr~~~~~FY~~vlG~kll~ee~------~~a~lg~~~~--~~~L~lEEsp-~~~~~~~~Glkh~a~i~i~v   81 (244)
T 3e0r_A           11 RIIPTLKANNRKLNETFYIETLGMKALLEES------AFLSLGDQTG--LEKLVLEEAP-SMRTRKVEGRKKLARLIVKV   81 (244)
T ss_dssp             EEEEEEEESSHHHHHHHHTTTTCCEEEEECS------SEEEEECTTC--CEEEEEEECC-TTTCBCCCSSCSEEEEEEEE
T ss_pred             EEeeEEEECCHHHHHHHHHhccCcEEeeccC------cEEEeecCCC--cceEEEEeCC-CcccccccccceeeeEEEEc
Confidence            3467899999999999999999999775432      2344443222  2334343311 1111223466677   5999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                      ++ .+.++.+    ..++.++...-.   +..++.+|+.||+||.|||....+..
T Consensus        82 p~-~~el~~l----L~~~~~~~~~~~---gdhgyA~yl~dPEGn~ieiyae~d~~  128 (244)
T 3e0r_A           82 EN-PLEIEGI----LSKTDSIHRLYK---GQNGYAFEIFSPEDDLILIHAEDDIA  128 (244)
T ss_dssp             SS-HHHHHHH----HTTCSCCSEEEE---CSSSEEEEEECTTCCEEEEECCSCGG
T ss_pred             CC-HHHHHHH----Hhcccccccccc---cCCcEEEEEECCCCCeEEEEEcCCHH
Confidence            99 4445545    455655422111   11247899999999999999866543

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.17  E-value=2.8e-05  Score=58.60  Aligned_cols=132  Identities=17%  Similarity=0.233  Sum_probs=86.8

Q ss_pred             EEEEEeC-CHHHHHHHHHHhc-CCEEEEeeec-------CCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           26 HAVYRVG-DLDRTIKFYTECF-GMKLLRKRDV-------PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        26 hv~l~v~-d~~~a~~fy~~~L-G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      ...|..+ |.++|++||+++| |.++......       +++...++.+.+++.  .+.+  ... .+ .+....++ .+
T Consensus         8 ~PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~--~~m~--~d~-~p-~~~~~~~~-sl   80 (163)
T 1u69_A            8 TICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGI--PCLG--LNG-GP-AFRHSEAF-SF   80 (163)
T ss_dssp             EEEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTE--EEEE--EEC-CT-TCCCCTTE-EE
T ss_pred             eEEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCE--EEEE--ECC-CC-CcCCCCce-EE
Confidence            4556777 9999999999999 9998743221       134566666776543  2222  111 11 22223343 67


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCCceeEEeeeCCccccHHHHHh
Q 022871           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEK  173 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v~D~~~~~~Fy~~  173 (291)
                      .+.++|   +++++++|.+.|.++.      .     +..++||.|+.|.|....     + .--+.-.|.+++.+-+..
T Consensus        81 ~v~~~d~~e~d~~~~~L~~~Gg~v~------~-----~G~v~D~fGv~W~i~~~~-----~-~~~~~d~d~~~~~r~~~a  143 (163)
T 1u69_A           81 QVATDDQAETDRLWNAIVDNGGEES------A-----CGWCRDKWGISWQITPRV-----L-SEAIASPDRAAARRAFEA  143 (163)
T ss_dssp             EEEESSHHHHHHHHHHHHHTTCEEC------S-----TTEEECTTSCEEEEEEHH-----H-HHHHTCSSHHHHHHHHHH
T ss_pred             EEEeCCHHHHHHHHHHHHhCCCEEE------E-----EEEEECCCCCEEEEEeEc-----h-HHhccCCCHHHHHHHHHH
Confidence            888887   6777899988898876      1     134899999999988532     0 011234688999999999


Q ss_pred             hhCCeeee
Q 022871          174 ALGMKLLR  181 (291)
Q Consensus       174 ~lG~~~~~  181 (291)
                      .|+++..+
T Consensus       144 m~~m~k~d  151 (163)
T 1u69_A          144 MMTMGRID  151 (163)
T ss_dssp             HTTCSSCC
T ss_pred             HHCCccee
Confidence            99987554

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=98.05  E-value=5.4e-05  Score=57.05  Aligned_cols=107  Identities=12%  Similarity=0.044  Sum_probs=62.5

Q ss_pred             EEeeeC-CccccHHHHHhhh-CCeeeeeeccC-------CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEE
Q 022871          157 VMLRVG-DLGRSIKFYEKAL-GMKLLRTVDKP-------EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       157 v~l~v~-D~~~~~~Fy~~~l-G~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      -.|.+. |.+++.+||+++| |.++......+       ++......+..+    +..+-+....+  .... +....+.
T Consensus         9 PyL~f~g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~----g~~~m~~d~~p--~~~~-~~~~sl~   81 (163)
T 1u69_A            9 ICLWYDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLNGGP--AFRH-SEAFSFQ   81 (163)
T ss_dssp             EEEEESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEECCT--TCCC-CTTEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEEC----CEEEEEECCCC--CcCC-CCceEEE
Confidence            346666 9999999999999 98866322111       222222223322    12232222111  1111 2224688


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +.|+| .+.+++++++|.+.|+++.           ++..++||.|+.|.|..+.
T Consensus        82 v~~~d-~~e~d~~~~~L~~~Gg~v~-----------~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           82 VATDD-QAETDRLWNAIVDNGGEES-----------ACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEESS-HHHHHHHHHHHHHTTCEEC-----------STTEEECTTSCEEEEEEHH
T ss_pred             EEeCC-HHHHHHHHHHHHhCCCEEE-----------EEEEEECCCCCEEEEEeEc
Confidence            88888 3344444555587898876           1236999999999998754

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.55  E-value=0.0002  Score=67.65  Aligned_cols=122  Identities=16%  Similarity=0.234  Sum_probs=75.3

Q ss_pred             CceeeeEEEEEeC---CHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeecc--CC-----------
Q 022871           20 DKRRFLHAVYRVG---DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN--YG-----------   83 (291)
Q Consensus        20 ~~~~i~hv~l~v~---d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------   83 (291)
                      .+++...+.+...   -.+++++||++.|++.......   .  .++...+.+.+..+.+.+...  +.           
T Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (941)
T 3opy_B            6 LFNGTSFITLFAPNISLLQASIDFYTNFLGFAIRKNSN---Q--KLFWLQLEEDQNNVSIQLILDPEHAASVSQIDQNIR   80 (941)
T ss_dssp             CSCEEEEEEEECCC-CC-HHHHHHHHHTTCCEECSSCS---C--CC---EECCTTSCCEEEEECSSCSCHHHHHHHHHHH
T ss_pred             eecceeEEEEEeCCHHHHHHHHHHHHhhccceeccccC---C--cceeEEEecCCCeEEEEEEeccccchhHHHHHHHHh
Confidence            4678888887765   5789999999999997654322   1  122222223333344443321  00           


Q ss_pred             -C----CcccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           84 -V----TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        84 -~----~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                       .    ....+..--.|++|.+.|++++.++|.+.+.++...|.+...  .. +|+.||+||+|+|.+...
T Consensus        81 ~~~~~~~~~dW~~~~~~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~--~e-~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           81 NLTRSLYRKDWRSIQSNIAFKSSSLSKLVKLLKDGGHPVQQSPNEISP--FE-VYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCC----------CCCEEEEEESCHHHHHHHHHTTTCCCBCSSSSCSC--EE-ECCSSCCEEEECC-CCSS
T ss_pred             hhhcccccccccccCceEEEEeCCHHHHHHHHHhcCCccccCCCcCCC--ce-EEeECCCCCEEEEeccCC
Confidence             0    001111123499999999999999999999877665554433  33 788999999999998764

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=97.25  E-value=0.0004  Score=65.57  Aligned_cols=109  Identities=18%  Similarity=0.255  Sum_probs=66.9

Q ss_pred             CCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeee-cCcc------------------eeccCcc
Q 022871          162 GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYN-YGVT------------------EYTKGNA  222 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~~~~------------------~~~~~~~  222 (291)
                      .-.+++.+||++.|++......   +.......+.  +.+....+.+... .+..                  .-+.+ -
T Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dW~~-~   94 (941)
T 3opy_B           21 SLLQASIDFYTNFLGFAIRKNS---NQKLFWLQLE--EDQNNVSIQLILDPEHAASVSQIDQNIRNLTRSLYRKDWRS-I   94 (941)
T ss_dssp             CC-HHHHHHHHHTTCCEECSSC---SCCC---EEC--CTTSCCEEEEECSSCSCHHHHHHHHHHHCCC-----------C
T ss_pred             HHHHHHHHHHHhhccceecccc---CCcceeEEEe--cCCCeEEEEEEeccccchhHHHHHHHHhhhhcccccccccc-c
Confidence            4578899999999999755421   1111122232  2223444544322 1110                  00111 2


Q ss_pred             eeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       223 ~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      ..|+.|.+.|++++.+.|    .+.+.++-..|.+.   +...+|..||+||.|+|.+.+.
T Consensus        95 ~~~l~f~~~dL~~~~~~L----~~~~~~~Q~~ps~~---~~~e~yt~DPlGNvIgfs~~~~  148 (941)
T 3opy_B           95 QSNIAFKSSSLSKLVKLL----KDGGHPVQQSPNEI---SPFEVYTVDPLGSLIGFSGFKN  148 (941)
T ss_dssp             CCEEEEEESCHHHHHHHH----HTTTCCCBCSSSSC---SCEEECCSSCCEEEECC-CCSS
T ss_pred             CceEEEEeCCHHHHHHHH----HhcCCccccCCCcC---CCceEEeECCCCCEEEEeccCC
Confidence            239999999999999999    88998876666643   2378999999999999998665

>3p8a_A Uncharacterized protein; mainly antiparallel beta sheets, alpha and beta protein, UNK function; HET: MSE BTB PG4; 1.95A {Staphylococcus aureus}

Probab=90.22  E-value=1.4  Score=35.82  Aligned_cols=37  Identities=8%  Similarity=0.151  Sum_probs=32.9

Q ss_pred             CCCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEe
Q 022871           16 WPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRK   52 (291)
Q Consensus        16 ~~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~   52 (291)
                      ..+....+|.+|.|.++|++++.+.|+++||......
T Consensus       183 ~HpnGa~gI~~vvi~~~dp~~~~~~~~~l~g~~~~~~  219 (274)
T 3p8a_A          183 KYFQKQFSIETVIVKSKNRSQTVSNWLKWFDMDIVEE  219 (274)
T ss_dssp             TTCCTTEEEEEEEEEETTHHHHHHHHHHHHCCEEEEE
T ss_pred             cCCCccceEEEEEEEeCCHHHHHHHHHHHhCCCcccc
Confidence            4555689999999999999999999999999998654

>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=84.47  E-value=26  Score=33.69  Aligned_cols=50  Identities=18%  Similarity=0.257  Sum_probs=35.4

Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ..+.|.+.|+..+.+.|.+..+..  .|.+...  . -+|..||-||.+.|....
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~-~~~~~dp~~~~~~~~~~~  174 (989)
T 3opy_A          125 GEVTFFTASIDKLKAKLIEIGAEI--IPSKIDL--V-EFSTRDPMGDVISFSSYP  174 (989)
T ss_dssp             CEEEEECSCHHHHHHHHHHSSCCB--CCCC--C--C-CEEEESSSEEEEECCSSS
T ss_pred             ceEEEEeCcHHHHHHHhhhccccc--CCCCCCc--e-eEEEecCCCCEEeeecCC
Confidence            467899999999999999873332  2222221  1 278899999999988765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	291
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	8e-29
d1f9za_	135	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	7e-17
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	7e-27
d2c21a1	139	d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathion	3e-13
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	3e-25
d1qipa_	176	d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lya	2e-11
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-17
d1twua_	137	d.32.1.8 (A:) Hypothetical protein YycE {Bacillus	2e-11
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	2e-17
d1sqda1	167	d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxyg	4e-05
d1sqia1	149	d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxyge	3e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	6e-17
d1sp8a1	172	d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxyg	6e-04
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	4e-16
d1zswa1	144	d.32.1.10 (A:1-144) Hypothetical protein BC1024 {B	1e-06
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	1e-15
d1mpya2	162	d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (met	2e-04
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	3e-15
d1ss4a_	149	d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillu	8e-05
d1jc4a_	145	d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propion	3e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	9e-15
d1t47a1	163	d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxyg	6e-04
d1f1ua1	146	d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxyge	2e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	4e-14
d1r9ca_	130	d.32.1.2 (A:) Fosfomycin resistance protein FosX {	8e-06
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	5e-14
d1mpya1	145	d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metap	1e-04
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	4e-12
d1f1ua2	176	d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxy	3e-04
d1nkia_	134	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-11
d2pjsa1	111	d.32.1.2 (A:3-113) Uncharacterized protein Atu1953	5e-11
d1zswa2	170	d.32.1.10 (A:145-314) Hypothetical protein BC1024	6e-11
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	1e-10
d1npba_	140	d.32.1.2 (A:) Fosfomycin resistance protein A (Fos	0.002
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	2e-10
d1xqaa_	113	d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillu	0.003
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	2e-10
d1xrka_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	0.001
d1lgta1	131	d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygena	2e-10
d1klla_	128	d.32.1.2 (A:) Mitomycin resistance protein D, MRD	9e-10
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-09
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	0.002
d1kw3b1	132	d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygena	1e-08
d1cjxa2	203	d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxy	1e-08
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	2e-08
d1sp8a2	224	d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxy	4e-08
d1ecsa_	120	d.32.1.2 (A:) Bleomycin resistance protein, BRP {K	5e-08
d1jifa_	122	d.32.1.2 (A:) Bleomycin resistance protein, BRP {S	3e-07
d1kw3b2	156	d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxyge	4e-07
d1t47a2	199	d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxy	2e-06
d1sqia2	210	d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxy	2e-05
d1sqda2	230	d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxy	6e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	8e-05
d1cjxa1	150	d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxyge	2e-04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score =  105 bits (261), Expect = 8e-29
 Identities = 74/132 (56%), Positives = 93/132 (70%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R LH + RVGDL R+I FYT+  GMKLLR  + PE KYS AF+G+GPE    V+ELTYN+
Sbjct: 2   RLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNW 61

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
           GV  Y++GT +GH A++ ++  +  E IR  GGNVTRE GP+KGGTT IAFV+DPDGY  
Sbjct: 62  GVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 143 ELIQRGPTPEPL 154
           ELI+       L
Sbjct: 122 ELIEEKDAGRGL 133

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

 Score = 73.6 bits (179), Expect = 7e-17
 Identities = 62/132 (46%), Positives = 86/132 (65%), Gaps = 4/132 (3%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            MLRVGDL RSI FY K LGMKLLRT + PEYKY+LA +GY  E +  V+ELTYN+GV +
Sbjct: 6   TMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDK 65

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
           Y  G AY  +A+S D+  ++ E +    ++ GG +TR+ G + G  T I    DPDG+K 
Sbjct: 66  YELGTAYGHIALSVDNAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKI 121

Query: 277 VLVDNEDFLKEI 288
            L++ +D  + +
Sbjct: 122 ELIEEKDAGRGL 133

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score =  100 bits (248), Expect = 7e-27
 Identities = 70/132 (53%), Positives = 84/132 (63%), Gaps = 5/132 (3%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR LH + RVGDLDR+IKFYTE  GMK+LRK DVPE+KY+  FLG+GPE S  V+ELTYN
Sbjct: 2   RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYN 61

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           YGVTSY     +GH AI  EDV +LV ++R     +  E          +AFV DPDGY 
Sbjct: 62  YGVTSYKHDEAYGHIAIGVEDVKELVADMRKHDVPIDYEDES-----GFMAFVVDPDGYY 116

Query: 142 FELIQRGPTPEP 153
            EL+      E 
Sbjct: 117 IELLNEKTMMEK 128

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]} Length = 139

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

 Score = 63.5 bits (153), Expect = 3e-13
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 9/131 (6%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            M+RVGDL RSIKFY + LGMK+LR  D PE KYTL  LGY  E  +TVLELTYNYGVT 
Sbjct: 7   TMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTS 66

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKT 276
           Y    AY  +AI  +DV +    +    ++    I  +       +  +   VDPDG+  
Sbjct: 67  YKHDEAYGHIAIGVEDVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYI 117

Query: 277 VLVDNEDFLKE 287
            L++ +  +++
Sbjct: 118 ELLNEKTMMEK 128

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.0 bits (240), Expect = 3e-25
 Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 26/153 (16%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE----- 77
                + RV D  +++ FYT   GM L++K D P  K+S  FL +  +      +     
Sbjct: 23  LLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIA 82

Query: 78  ----------LTYNYGVTSYD---------IGTGFGHFAIATEDVYKLVENIRAKGGNVT 118
                     LT+N+G    +            GFGH  IA  DVY   +     G    
Sbjct: 83  WALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFV 142

Query: 119 REPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP 151
           ++P    G    +AF++DPDGY  E++      
Sbjct: 143 KKPDD--GKMKGLAFIQDPDGYWIEILNPNKMA 173

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 22/146 (15%)

Query: 154 LCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLE------ 207
           L Q MLRV D  +S+ FY + LGM L++  D P  K++L  L Y +++     +      
Sbjct: 24  LQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAW 83

Query: 208 ---------LTYNYGV-----TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                    LT+N+G        Y  GN+  +                   +ELG K  +
Sbjct: 84  ALSRKATLELTHNWGTEDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVK 143

Query: 254 QPGSIPGLNTKITSFVDPDGWKTVLV 279
           +P    G    +    DPDG+   ++
Sbjct: 144 KPD--DGKMKGLAFIQDPDGYWIEIL 167

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 74.9 bits (183), Expect = 2e-17
 Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 8/131 (6%)

Query: 23  RFLHAVYRV----GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVEL 78
            F  A  R+    G LD  I+FY E   +K +         Y     G      H     
Sbjct: 5   SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIG-EFSQHNGYDGVMFGLPHADYHLEFTQ 63

Query: 79  TYNYGVTSYDIGTGFGHFAIAT-EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
                            F +    ++  +   ++  G        P          ++DP
Sbjct: 64  YEGGSTAPVPHPDSLLVFYVPNAVELAAITSKLKHMGYQEVESENPYWSN--GGVTIEDP 121

Query: 138 DGYIFELIQRG 148
           DG+    +   
Sbjct: 122 DGWRIVFMNSK 132

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

 Score = 58.4 bits (140), Expect = 2e-11
 Identities = 17/133 (12%), Positives = 42/133 (31%), Gaps = 10/133 (7%)

Query: 154 LCQVMLRV----GDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELT 209
                +R+    G L   I+FYE+ L +K +    +      +       +      +  
Sbjct: 6   FQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYE 65

Query: 210 YNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFV 269
                      +       +  ++      +    + +G +        P  +    +  
Sbjct: 66  GGSTAPVPHPDSLLVFYVPNAVELAAITSKL----KHMGYQEVESEN--PYWSNGGVTIE 119

Query: 270 DPDGWKTVLVDNE 282
           DPDGW+ V ++++
Sbjct: 120 DPDGWRIVFMNSK 132

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 75.6 bits (185), Expect = 2e-17
 Identities = 31/157 (19%), Positives = 48/157 (30%), Gaps = 27/157 (17%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK DK   +RF H  +  GD     + ++   GM+   K D+      +A          
Sbjct: 3   PKSDKFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLR 62

Query: 74  FVVELTYNYGVTSYDIG-----------------------TGFGHFAIATEDVYKLVENI 110
           F+    Y+  +++ +I                         G    AI  ED        
Sbjct: 63  FLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS 122

Query: 111 RAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR 147
            A G   +  P  L    T IA VK     +   +  
Sbjct: 123 VANGAIPSSPPIVLNEAVT-IAEVKLYGDVVLRYVSY 158

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 167

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 41.0 bits (95), Expect = 4e-05
 Identities = 16/127 (12%), Positives = 30/127 (23%), Gaps = 27/127 (21%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +    GD     + +   LGM+     D        A       D   +    Y+  ++ 
Sbjct: 16  IEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSA 75

Query: 217 -----------------------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITR 253
                                   + G     VAI  +D   +  +        G   + 
Sbjct: 76  GEIKPTTTASIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSS 131

Query: 254 QPGSIPG 260
            P  +  
Sbjct: 132 PPIVLNE 138

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.5 bits (182), Expect = 3e-17
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 10/141 (7%)

Query: 17  PKKDKRRFL---HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           PK ++ RFL      + VG+  +   FY    G + L  + +               +  
Sbjct: 2   PKPERGRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIV 61

Query: 74  FVVELTYNYGVTSYDI-----GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--G 126
           FV+    N             G G    A   ED   +V+  R +G  + REP   +   
Sbjct: 62  FVLCSALNPWNKEMGDHLVKHGDGVKDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKF 121

Query: 127 GTTHIAFVKDPDGYIFELIQR 147
           G    A ++        L+++
Sbjct: 122 GKVKFAVLQTYGDTTHTLVEK 142

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 74.5 bits (182), Expect = 6e-17
 Identities = 23/151 (15%), Positives = 39/151 (25%), Gaps = 21/151 (13%)

Query: 17  PKKDK---RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH 73
           P+ D+     F H      D       ++   G  L  + D+     ++A L        
Sbjct: 4   PRSDRFHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLS 63

Query: 74  FVVELTYNYGVTSYDI-----------------GTGFGHFAIATEDVYKLVENIRAKGGN 116
           F+    Y +G  +                    G      A+   D         A G  
Sbjct: 64  FLFTAPYAHGADAATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGAR 123

Query: 117 VTREPGPLKGGTTHIAFVKDPDGYIFELIQR 147
               P  L  G   +A V+     +   +  
Sbjct: 124 PAFGPVDLGRGFR-LAEVELYGDVVLRYVSY 153

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 172

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 37.5 bits (86), Expect = 6e-04
 Identities = 17/117 (14%), Positives = 25/117 (21%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V L   D   +   +   LG  L    D        A L       + +    Y +G   
Sbjct: 17  VELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADA 76

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVT-------------QELGGKITRQPGSIPG 260
            T        A +          V  V                 G +    P  +  
Sbjct: 77  ATAALPSFSAAAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGR 133

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 71.6 bits (174), Expect = 4e-16
 Identities = 10/134 (7%), Positives = 27/134 (20%), Gaps = 2/134 (1%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +   H      + +    FY    G++ ++     ++             S       + 
Sbjct: 5   KGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFE 64

Query: 82  YGVT--SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
             +   +Y          +       L            +               +D +G
Sbjct: 65  IPLVGRTYRGTNAITRIGLLVPSEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEG 124

Query: 140 YIFELIQRGPTPEP 153
               L+        
Sbjct: 125 LRLVLLVSNGEKVE 138

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 144

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 45.4 bits (106), Expect = 1e-06
 Identities = 14/129 (10%), Positives = 35/129 (27%), Gaps = 6/129 (4%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAML--GYAEEDQTTVLELTYNYGV 214
           + +   +   +  FY+  LG++ ++     +      +          T +         
Sbjct: 10  ISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVG 69

Query: 215 TEYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 274
             Y   NA  ++ +                 E       +  +          F D +G 
Sbjct: 70  RTYRGTNAITRIGLLVPSEDSLHYWKE--RFEKFDVKHSEMTTYAN--RPALQFEDAEGL 125

Query: 275 KTVLVDNED 283
           + VL+ +  
Sbjct: 126 RLVLLVSNG 134

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 70.7 bits (172), Expect = 1e-15
 Identities = 26/157 (16%), Positives = 48/157 (30%), Gaps = 12/157 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           RF HA+    +L  T   +T+  G  L  +                  Q   +    ++ 
Sbjct: 5   RFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTR--------VAQFLSLSTKAHDV 56

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVEN---IRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
               +       H +   E    L+     I     ++   P           +  DP G
Sbjct: 57  AFIHHPEKGRLHHVSFHLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSG 116

Query: 140 YIFELIQRGPTPEPLCQ-VMLRVGDLGRSIKFYEKAL 175
              E+   G    P  + V      LG++I ++++ L
Sbjct: 117 NRNEVFCGGDYNYPDHKPVTWTTDQLGKAIFYHDRIL 153

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 162

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 16/117 (13%), Positives = 27/117 (23%), Gaps = 9/117 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
            ++   +L  +   + K LG  L   V           L  + +            G   
Sbjct: 9   ALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLH 68

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
           +   +      +       S              I   P      + K   F DP G
Sbjct: 69  HVSFHLETWEDLLRAADLISMT---------DTSIDIGPTRHGLTHGKTIYFFDPSG 116

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 69.7 bits (169), Expect = 3e-15
 Identities = 20/140 (14%), Positives = 39/140 (27%), Gaps = 16/140 (11%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRK--------RDVPEEKYSNAFLGFGPEQSHF 74
           R  +    V  LD  I F+ E       R         R                   H 
Sbjct: 9   RMDNVSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHS 68

Query: 75  VVELTYNYGVTS-------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGG 127
            +EL+      +            G+       ED+ ++V  +   G  +  E    +  
Sbjct: 69  RIELSRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENS 128

Query: 128 TTHIAFVKDPDGYIFELIQR 147
              + +++  +G +  L + 
Sbjct: 129 Y-RLCYIRGVEGILIGLAEE 147

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]} Length = 149

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

 Score = 39.7 bits (91), Expect = 8e-05
 Identities = 17/128 (13%), Positives = 40/128 (31%), Gaps = 12/128 (9%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYT--------LAMLGYAEEDQTTVLEL 208
           V + V  L  +I F+E+       R   + E+           + +      D  + +EL
Sbjct: 13  VSIVVESLDNAISFFEEIGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIEL 72

Query: 209 TYNYGVTEYTKGNAYAQVAISTDDVYKSAEVVNLVTQEL---GGKITRQPGSIPGLNTKI 265
           +                 A+    V  + E ++ +   L   G ++  +       + ++
Sbjct: 73  SRFLTPPTIADHRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYEN-SYRL 131

Query: 266 TSFVDPDG 273
                 +G
Sbjct: 132 CYIRGVEG 139

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

 Score = 69.3 bits (168), Expect = 3e-15
 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 12/133 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV--ELTYNYG 83
           H  Y   D D   K+Y E FG   L + + PE+      +    + +  +   ++     
Sbjct: 10  HVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLN 69

Query: 84  VTS--------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFV- 134
             S        ++   G  H A   +D+  +   +R +G  +  +   L  G   I F+ 
Sbjct: 70  DESTVAKWLAKHNGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMH 129

Query: 135 -KDPDGYIFELIQ 146
            K   G + EL Q
Sbjct: 130 PKSGKGVLIELTQ 142

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 68.3 bits (166), Expect = 9e-15
 Identities = 26/136 (19%), Positives = 39/136 (28%), Gaps = 10/136 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +     V+ VG+  +   +Y+  FGM+L+            A        + FV+     
Sbjct: 6   KGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIK 65

Query: 82  YGVTSYDI--------GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHI 131
                           G G    AI   D           G     EP  LK   GT  +
Sbjct: 66  PATPWGHFLADHVAEHGDGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVL 125

Query: 132 AFVKDPDGYIFELIQR 147
           A +         L+ R
Sbjct: 126 AAIATYGKTRHTLVDR 141

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 163

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 37.5 bits (86), Expect = 6e-04
 Identities = 11/69 (15%), Positives = 19/69 (27%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V+  VG+  ++  +Y  A GM+L+            A           VL          
Sbjct: 11  VVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPW 70

Query: 217 YTKGNAYAQ 225
                 +  
Sbjct: 71  GHFLADHVA 79

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 146

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 67.0 bits (162), Expect = 2e-14
 Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 16/143 (11%)

Query: 17  PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVV 76
           P  D  R  +    V DL ++ +FY +  G+ +  + +                    + 
Sbjct: 10  PAPDIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE-------------NTIYLRSLE 56

Query: 77  ELTYNYGVTSYDIGTGFGHFAIATE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAF 133
           E  ++  V           FA   +   +V       +  G    R       G      
Sbjct: 57  EFIHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVR 116

Query: 134 VKDPDGYIFELIQRGPTPEPLCQ 156
           V+DP G+ +E        E L Q
Sbjct: 117 VEDPLGFPYEFFYETEHVERLTQ 139

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 65.7 bits (159), Expect = 4e-14
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 8/124 (6%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-AFLGFGPEQSHFVVELTY 80
               H  + V DL+R  +     F  + +   D  +   S   F   G       + +  
Sbjct: 3   EGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD------IWVAI 56

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G    +       F I   D  +  E +   G ++      ++G    I +  D D +
Sbjct: 57  MQGEKLAERSYNHIAFKIDDADFDRYAERVGKLGLDMRPPRPRVEGEGRSI-YFYDDDNH 115

Query: 141 IFEL 144
           +FEL
Sbjct: 116 MFEL 119

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]} Length = 130

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

 Score = 42.2 bits (98), Expect = 8e-06
 Identities = 19/117 (16%), Positives = 35/117 (29%), Gaps = 10/117 (8%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           +   V DL R  +  E     + +   D  ++  +        +     + +    G  E
Sbjct: 8   MTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD-----IWVAIMQG--E 60

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                +Y  +A   DD         +   +LG  +      + G    I  F D D 
Sbjct: 61  KLAERSYNHIAFKIDDADFDRYAERV--GKLGLDMRPPRPRVEGEGRSIY-FYDDDN 114

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 65.8 bits (159), Expect = 5e-14
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 9/129 (6%)

Query: 18  KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVE 77
            K   R  H   RV D+ + ++ Y E  G+  + + D                      +
Sbjct: 2   NKGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREAD 61

Query: 78  LTYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDP 137
                           G   +  + + +L  ++ A G  V + P             + P
Sbjct: 62  EPGMD---------FMGFKVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAP 112

Query: 138 DGYIFELIQ 146
            G+ FEL  
Sbjct: 113 SGHHFELYA 121

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]} Length = 145

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

 Score = 39.2 bits (90), Expect = 1e-04
 Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 13/117 (11%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
           V LRV D+ ++++ Y + LG+  +   D+                       +      +
Sbjct: 11  VQLRVLDMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKF---------SLVLREAD 61

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
               +      +  D + +    +       G  + + P        +   F  P G
Sbjct: 62  EPGMDFMGFKVVDEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSG 114

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 61.4 bits (148), Expect = 4e-12
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 9/124 (7%)

Query: 23  RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNY 82
           R  H      D+ R   +  E  G ++       +     A++          +      
Sbjct: 5   RLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGP 63

Query: 83  GVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAF--VKDPDGY 140
            +      T   H  I   D       + A   +   E GP + G ++  +  + DPDG+
Sbjct: 64  RMHHVAFATHEKHNIIQICD------KMGALRISDRIERGPGRHGVSNAFYLYILDPDGH 117

Query: 141 IFEL 144
             E+
Sbjct: 118 RIEI 121

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]} Length = 176

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

 Score = 38.7 bits (89), Expect = 3e-04
 Identities = 19/118 (16%), Positives = 32/118 (27%), Gaps = 9/118 (7%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE 216
                 D+ R   + E  LG ++   +   +     A +   +    T L       +  
Sbjct: 9   FNQVTPDVPRGRAYLE-DLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHH 67

Query: 217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW 274
                      I   D   +  +          +I R PG     N      +DPDG 
Sbjct: 68  VAFATHEKHNIIQICDKMGALRI--------SDRIERGPGRHGVSNAFYLYILDPDGH 117

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 24/123 (19%), Positives = 34/123 (27%), Gaps = 14/123 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
               H    V DL  +I FY +  G +L             A+L  G             
Sbjct: 3   TGLNHLTLAVADLPASIAFYRDLLGFRLEA------RWDQGAYLELGSLWLCLS----RE 52

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                         F IA  D  +    +RA G    ++            +  DPDG+ 
Sbjct: 53  PQYGGPAADYTHYAFGIAAADFARFAAQLRAHGVREWKQNRS----EGDSFYFLDPDGHR 108

Query: 142 FEL 144
            E 
Sbjct: 109 LEA 111

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]} Length = 111

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 56.5 bits (135), Expect = 5e-11
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           RR + A     +  R   FY +  GM              + ++           ++++ 
Sbjct: 2   RR-VVANIATPEPARAQAFYGDILGM---------PVAMDHGWIVTHASPLEAHAQVSFA 51

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
                   GT     +I  ++  ++   I   G  +   P     G     F++DP G +
Sbjct: 52  RE---GGSGTDVPDLSIEVDNFDEVHARILKAGLPIEYGPVTEAWG-VQRLFLRDPFGKL 107

Query: 142 FELI 145
             ++
Sbjct: 108 INIL 111

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]} Length = 170

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

 Score = 57.8 bits (139), Expect = 6e-11
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 12/131 (9%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           +        V  LD+     TE FG   + + D        A       ++   + + Y 
Sbjct: 11  QGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ------EAIFQSIKGEAFGEIVVKYL 64

Query: 82  YGVTSYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPD 138
            G T         H AI      ++    E ++ +G + +   G +        + ++ +
Sbjct: 65  DGPTEKPGRGSIHHLAIRVKNDAELAYWEEQVKQRGFHSS---GIIDRFYFKSLYFRESN 121

Query: 139 GYIFELIQRGP 149
           G +FE+   GP
Sbjct: 122 GILFEIATDGP 132

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 56.2 bits (134), Expect = 1e-10
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 11/119 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V DL +++ F+ E  G+           +++        +    +        V 
Sbjct: 7   HLTLAVSDLQKSVTFWHELLGLT-------LHARWNTGAYLTCGDLWVCLSYDEARQYVP 59

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
             +       F +A ED   L + +   G  + ++            +  DPDG+  EL
Sbjct: 60  PQESDYTHYAFTVAEEDFEPLSQRLEQAGVTIWKQNKS----EGASFYFLDPDGHKLEL 114

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]} Length = 140

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

 Score = 35.4 bits (80), Expect = 0.002
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLLR 181
           + L V DL +S+ F+ + LG+ L  
Sbjct: 8   LTLAVSDLQKSVTFWHELLGLTLHA 32

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 55.1 bits (131), Expect = 2e-10
 Identities = 18/119 (15%), Positives = 34/119 (28%), Gaps = 13/119 (10%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H    V D+    +F  + FG+     R                  +   +         
Sbjct: 6   HLNLTVADVVAAREFLEKYFGLTCSGTRGNAFAVM---------RDNDGFILTLMKGKEV 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            Y      G    + E V K+ + ++  G  V            +  +V+ P G+  E+
Sbjct: 57  QYPKTFHVGFPQESEEQVDKINQRLKEDGFLVEPPK----HAHAYTFYVEAPGGFTIEV 111

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]} Length = 113

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

 Score = 34.7 bits (78), Expect = 0.003
 Identities = 7/24 (29%), Positives = 12/24 (50%)

Query: 157 VMLRVGDLGRSIKFYEKALGMKLL 180
           + L V D+  + +F EK  G+   
Sbjct: 7   LNLTVADVVAAREFLEKYFGLTCS 30

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 55.4 bits (132), Expect = 2e-10
 Identities = 17/122 (13%), Positives = 30/122 (24%), Gaps = 8/122 (6%)

Query: 25  LHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGV 84
              V    D+   ++F+T+  G   +   D        A +                   
Sbjct: 6   AVPVLTARDVAEAVEFWTDRLGFSRVFVED------DFAGVVRDDVTLFISAVQDQVVPD 59

Query: 85  TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFEL 144
            +       G   +  E    +  N R   G    E      G      ++DP G     
Sbjct: 60  NTQAWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWGRE--FALRDPAGNCVHF 117

Query: 145 IQ 146
           + 
Sbjct: 118 VA 119

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

 Score = 36.1 bits (82), Expect = 0.001
 Identities = 12/116 (10%), Positives = 27/116 (23%), Gaps = 12/116 (10%)

Query: 158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEY 217
           +L   D+  +++F+   LG   +   D              +                  
Sbjct: 9   VLTARDVAEAVEFWTDRLGFSRVFVEDDFAGVV------RDDVTLFISAVQDQVVPDNTQ 62

Query: 218 TKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                     +  +     +      +     +I  QP        +  +  DP G
Sbjct: 63  AWVWVRGLDELYAEWSEVVSTNFRDASGPAMTEIVEQPWG------REFALRDPAG 112

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]} Length = 131

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 20/125 (16%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R   +  + V D+     F T+  G+      D             G             
Sbjct: 3   RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------------NGDLFRIDSRAWRIA 50

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
                 D     G+       + ++ + ++  G  VT     L    G T +    DP G
Sbjct: 51  VQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]} Length = 128

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

 Score = 53.6 bits (127), Expect = 9e-10
 Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 4/130 (3%)

Query: 23  RFLHAVYRVGDLDRTIKFYTEC-FGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
           R       V D+ ++++FY +    +          E   +  +    +    V      
Sbjct: 2   RISLFAVVVEDMAKSMEFYRKMGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPE 61

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           +   +             T  V K    +   G     +P     G    A VKDPDG +
Sbjct: 62  WQAPTGGHRFAIAFEFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQ-RYAIVKDPDGNV 120

Query: 142 FELIQRGPTP 151
            +L    P P
Sbjct: 121 VDLFA--PLP 128

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 52.1 bits (124), Expect = 2e-09
 Identities = 17/121 (14%), Positives = 35/121 (28%), Gaps = 12/121 (9%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
                V ++ +           K            ++ F  F       ++   +   + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADYA--------NDGFAQFTIGSHCLMLSQNHLVPLE 56

Query: 86  SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI 145
           ++  G       I  EDV +  + +   G  V   P     GT     V+ P G + +  
Sbjct: 57  NFQSGI---IIHIEVEDVDQNYKRLNELGIKVLHGPTVTDWGT-ESLLVQGPAGLVLDFY 112

Query: 146 Q 146
           +
Sbjct: 113 R 113

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 35.6 bits (81), Expect = 0.002
 Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 16/118 (13%)

Query: 156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT 215
           Q+ + V ++ +     E  L  K              A  G+A+    +   +     + 
Sbjct: 5   QLDIIVSNVPQVCADLEHILDKKADY-----------ANDGFAQFTIGSHCLMLSQNHLV 53

Query: 216 EYTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDG 273
                 +   + I  +DV ++ + +N +  ++    T          T+      P G
Sbjct: 54  PLENFQSGIIIHIEVEDVDQNYKRLNELGIKVLHGPTVTDW-----GTESLLVQGPAG 106

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 132

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 50.4 bits (119), Expect = 1e-08
 Identities = 19/125 (15%), Positives = 34/125 (27%), Gaps = 14/125 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
            R  +  + V D+     F T+  G+               A            V+    
Sbjct: 3   ERLGYLGFAVKDVPAWDHFLTKSVGLM------AAGSAGDAALYRADQRAWRIAVQ---- 52

Query: 82  YGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDG 139
                 D     G        + ++ + +R  G   TR    L        +  ++DP G
Sbjct: 53  --PGELDDLAYAGLEVDDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFG 110

Query: 140 YIFEL 144
              E+
Sbjct: 111 LPLEI 115

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 203

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 51.5 bits (123), Expect = 1e-08
 Identities = 21/136 (15%), Positives = 37/136 (27%), Gaps = 12/136 (8%)

Query: 22  RRFLHAVYRV--GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELT 79
           +   H  + V  G +     FY + F  +  R  D+  E                 + L 
Sbjct: 4   KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLN 63

Query: 80  YNYGVTSYDIG--------TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHI 131
                 +  I          G  H A  T+D+ K  + ++  G      P         +
Sbjct: 64  EESSKGAGQIEEFLMQFNGEGIQHVAFLTDDLVKTWDALKKIGMRFMTAPPD--TYYEML 121

Query: 132 AFVKDPDGYIFELIQR 147
                  G   + +Q 
Sbjct: 122 EGRLPDHGEPVDQLQA 137

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 49.9 bits (118), Expect = 2e-08
 Identities = 19/126 (15%), Positives = 33/126 (26%), Gaps = 9/126 (7%)

Query: 28  VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSN-------AFLGFGPEQSHFVVELTY 80
           +     +   + FY   FG         P+ K          + L      S  V +++ 
Sbjct: 12  LVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA-GSSFVVCDVSS 70

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY 140
             G ++         F + T+D    V      G                   V DP G 
Sbjct: 71  LPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGV 129

Query: 141 IFELIQ 146
            +   +
Sbjct: 130 TWIFAE 135

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]} Length = 224

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

 Score = 50.5 bits (120), Expect = 4e-08
 Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 13/113 (11%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRD-----VPEEKYSNAFLGFGPEQSHFVV 76
            RF H V  V +L     ++    G     +         E   ++  L    E     +
Sbjct: 8   SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPL 67

Query: 77  -ELTYNYGVTS-------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
            E  +     S       +  G G  H A+A++DV + +  ++A+      E 
Sbjct: 68  NEPVHGTKRRSQIQTFLDHHGGPGVQHMALASDDVLRTLREMQARSAMGGFEF 120

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]} Length = 120

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 48.4 bits (114), Expect = 5e-08
 Identities = 21/124 (16%), Positives = 34/124 (27%), Gaps = 20/124 (16%)

Query: 30  RVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDI 89
              D D T  FY    G  +              F   G         +   +     D 
Sbjct: 9   PSRDFDSTAAFYER-LGFGI-------------VFRDAGWMILQRGDLMLEFFAHPGLDP 54

Query: 90  GTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTH------IAFVKDPDGYIFE 143
              +    +  +D+ +     ++ G   T    P             +A + DPDG +  
Sbjct: 55  LASWFSCCLRLDDLAEFYRQCKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLR 114

Query: 144 LIQR 147
           LIQ 
Sbjct: 115 LIQN 118

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]} Length = 122

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

 Score = 46.2 bits (108), Expect = 3e-07
 Identities = 17/130 (13%), Positives = 29/130 (22%), Gaps = 22/130 (16%)

Query: 23  RFLHA--VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY 80
           +FL A  V    D+   + F+ +  G +                            ++  
Sbjct: 3   KFLGAVPVLTAVDVPANVSFWVDTLGFEKDFGDR--------------DFAGVRRGDIRL 48

Query: 81  NYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTT------HIAFV 134
           +   T + I        I   D   L E           +                   V
Sbjct: 49  HISRTEHQIVADNTSAWIEVTDPDALHEEWARAVSTDYADTSGPAMTPVGESPAGREFAV 108

Query: 135 KDPDGYIFEL 144
           +DP G     
Sbjct: 109 RDPAGNCVHF 118

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]} Length = 156

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

 Score = 46.7 bits (110), Expect = 4e-07
 Identities = 23/119 (19%), Positives = 38/119 (31%), Gaps = 9/119 (7%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT 85
           H V  V D  + + FYTE  G  L    D+     ++    F            +   + 
Sbjct: 13  HFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHF-----LHCNGRHHTIALA 67

Query: 86  SYDIGTGFGHFAIAT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYI 141
           ++ I     HF +     +DV    + + A G   +   G      T   +   P   I
Sbjct: 68  AFPIPKRIHHFMLQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMI 125

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]} Length = 199

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHF------VVELT 79
             V   G ++  + FY +  G   +++    +     + L               + E  
Sbjct: 12  GNVEL-GRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPA 70

Query: 80  YNYGVT------SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                +       +  G G  H A+ T D+ + V  +RA G      P
Sbjct: 71  LAKKKSQIDEYLEFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTP 118

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]} Length = 210

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 15/108 (13%), Positives = 35/108 (32%), Gaps = 13/108 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH-FVVELTYNYGV 84
                  +++   ++Y +          D  +     + L      ++   +++  N   
Sbjct: 30  GNQPD-QEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPA 88

Query: 85  T-----------SYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREP 121
                        Y+ G G  H A+ TED+   + ++R +G      P
Sbjct: 89  PGRKKSQIQEYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVP 136

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 230

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 40.9 bits (95), Expect = 6e-05
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 13/102 (12%)

Query: 26  HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSH------FVVEL- 78
           HAV  V +L   + +     G     +    +   + + L      S+       + E  
Sbjct: 25  HAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEMVLLPINEPV 84

Query: 79  ------TYNYGVTSYDIGTGFGHFAIATEDVYKLVENIRAKG 114
                 +       ++ G G  H A+ +ED+++ +  +R + 
Sbjct: 85  HGTKRKSQIQTYLEHNEGAGLQHLALMSEDIFRTLREMRKRS 126

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 39.7 bits (92), Expect = 8e-05
 Identities = 14/122 (11%), Positives = 36/122 (29%), Gaps = 10/122 (8%)

Query: 32  GDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGT 91
           G+       Y +  G  L       +            ++      +  ++ + + D   
Sbjct: 12  GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP 71

Query: 92  GFGHFA---------IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIF 142
            + +           + ++   + + N  A+GG+V    GP     +      D  G  +
Sbjct: 72  AYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASF-GMFTDRFGVAW 130

Query: 143 EL 144
            +
Sbjct: 131 MV 132

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]} Length = 150

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 15/138 (10%), Positives = 33/138 (23%), Gaps = 11/138 (7%)

Query: 22  RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYN 81
             F    +           +        +    V   +  N  L +   + + ++    N
Sbjct: 8   MGFEFIEFASPTPGTLEPIFEI------MGFTKVATHRSKNVHL-YRQGEINLILNNEPN 60

Query: 82  YGVTSY--DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDG 139
              + +  + G      A   +D  K        G               ++  +K   G
Sbjct: 61  SIASYFAAEHGPSVCGMAFRVKDSQKAYNRALELGAQPIHI--DTGPMELNLPAIKGIGG 118

Query: 140 YIFELIQRGPTPEPLCQV 157
               LI R      +  +
Sbjct: 119 APLYLIDRFGEGSSIYDI 136

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	291
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.84
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.83
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.82
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.81
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.8
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.8
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.79
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.79
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.77
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.77
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.76
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.76
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.76
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.76
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.75
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.75
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.75
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.74
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.74
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.74
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.73
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.73
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.73
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.73
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.72
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.72
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.72
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.71
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.71
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.71
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.7
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.7
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.7
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.7
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.7
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.7
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.69
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.68
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.68
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.68
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.67
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.67
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.66
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.66
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.66
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.65
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.65
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.63
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.63
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.61
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.61
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.59
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.58
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.55
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.51
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.51
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.49
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.48
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.45
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.45
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.35
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.31
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.3
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.28
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.21
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.2
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	99.19
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.15
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.08
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	99.06
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.05
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.03
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.01
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	98.78
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.77
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	98.63
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.33
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	98.11
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	96.73
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	95.69
d2g3aa1	137	Probable acetyltransferase Atu2258 {Agrobacterium	84.04

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.84  E-value=4e-20  Score=135.64  Aligned_cols=133  Identities=47%  Similarity=0.831  Sum_probs=95.7

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      +++.|+.|.|+|+++|.+||+++|||++...............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            57899999999999999999999999988766544444444443322222222333222233323334557889999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhhh
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKEI  288 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~~  288 (291)
                      ++++..+++    +++|..+...|...++++.+++|++||||++|||+|.++..+.+
T Consensus        81 ~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~~~  133 (135)
T d1f9za_          81 NAAEACEKI----RQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGRGL  133 (135)
T ss_dssp             CHHHHHHHH----HHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-------
T ss_pred             HHHHHHHHH----HHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccccC
Confidence            999999999    99999999998888876678899999999999999998876654

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.4e-19  Score=132.69  Aligned_cols=130  Identities=56%  Similarity=1.000  Sum_probs=96.9

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +++.|++|.|+|++++.+||+++|||++..+............+........................+.+..|+++.++
T Consensus         1 Mkl~Hv~i~V~Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (135)
T d1f9za_           1 MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVD   80 (135)
T ss_dssp             CCEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECS
T ss_pred             CcceEEEEEcCCHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchH
Confidence            58999999999999999999999999998877655554444444433322222333332233333345567899999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCC
Q 022871          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTP  151 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~  151 (291)
                      ++++..++++++|..+...|...+.+...++||+||||++|||++..+..
T Consensus        81 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~  130 (135)
T d1f9za_          81 NAAEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAG  130 (135)
T ss_dssp             CHHHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC----
T ss_pred             HHHHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCcc
Confidence            99999999999999988887777776666789999999999999987544

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.82  E-value=5.2e-19  Score=132.10  Aligned_cols=127  Identities=17%  Similarity=0.267  Sum_probs=93.4

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----------CceeeEEEecCCCCceeEE-EeeccCCC--
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----------EKYSNAFLGFGPEQSHFVV-ELTYNYGV--   84 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~--   84 (291)
                      ..+++|+|++|.|+|++++.+||++ |||++..+.....           .....+++...+....+.+ ........  
T Consensus         5 ~~~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           5 NKLLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             CCEEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTSSCEEEEEEEEESCCCCB
T ss_pred             CCCCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeecccceEEEEEeeccccCccc
Confidence            4589999999999999999999998 9999987754322           2334555555443333222 11122111  


Q ss_pred             --CcccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           85 --TSYDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        85 --~~~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                        .......|++|++|.|+|+++++++|+++|+++..+|....++.. .+|++||+|+.|||+|.
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~-~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYR-LCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEE-EEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeE-EEEEECCCCCEEEEEEc
Confidence              111234579999999999999999999999999888877776554 58999999999999985

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.81  E-value=1.4e-18  Score=129.05  Aligned_cols=129  Identities=9%  Similarity=0.081  Sum_probs=91.1

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC-ceeeEEEecCCCCceeEEEeeccCCCCcccCC-CCeeEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIG-TGFGHF   96 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~i   96 (291)
                      ..|++|+||+|.|+|++++.+||+++|||++..+....+. .....+++.........+.........+...+ .++.|+
T Consensus         2 ~~i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hi   81 (144)
T d1zswa1           2 YEIKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRI   81 (144)
T ss_dssp             SCCCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEE
T ss_pred             CcccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEE
Confidence            3689999999999999999999999999999877544332 23333344333333344444433322222333 368999


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +|.|+|   ++++.++|++.|+.+.. +.... +.. .+||+||||+.|||++..+.
T Consensus        82 af~v~~~~~l~~~~~~l~~~gv~~~~-~~~~~-~~~-~~yf~DPdG~~iEl~~~~~~  135 (144)
T d1zswa1          82 GLLVPSEDSLHYWKERFEKFDVKHSE-MTTYA-NRP-ALQFEDAEGLRLVLLVSNGE  135 (144)
T ss_dssp             EEEESCHHHHHHHHHHHHHTTCEECC-SEEET-TEE-EEEEECTTCCEEEEEECTTC
T ss_pred             EEecCCchhHHHHhhhhhccceeeeC-ccccC-CeE-EEEEECCCCCEEEEEEeCCC
Confidence            999988   67788999999998744 34443 333 48999999999999987653

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.80  E-value=2e-19  Score=128.44  Aligned_cols=115  Identities=20%  Similarity=0.140  Sum_probs=87.7

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      +++.|+.|.|+|++++.+||+++||+++.....    ++..+..+      ...+.+........ ...+...+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~----~~~~~~~g------~~~l~l~~~~~~~~-~~~~~~~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND----GFAQFTIG------SHCLMLSQNHLVPL-ENFQSGIIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET----TEEEEEET------TEEEEEESSCSSSC-CCCCSCEEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC----CeEEEEEc------CceeeeeecccCCC-CCCCcceEEEEEEC
Confidence            468999999999999999999999999755322    23333222      34555554332221 12233468999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      |++++++++    +++|+++..+|...|+ +.+.+||+|||||.|||.|.+
T Consensus        70 D~d~~~~~l----~~~G~~i~~~~~~~~~-g~~~~~~~DPdGn~ie~~~~k  115 (115)
T d2i7ra1          70 DVDQNYKRL----NELGIKVLHGPTVTDW-GTESLLVQGPAGLVLDFYRMK  115 (115)
T ss_dssp             CHHHHHHHH----HHHTCCEEEEEEECTT-SCEEEEEECGGGCEEEEEECC
T ss_pred             CHHHHHHHH----HhhccccccceEEeeC-CeEEEEEECCCCCEEEEEEeC
Confidence            999999999    9999999999998887 458999999999999999864

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.80  E-value=5.2e-19  Score=126.20  Aligned_cols=114  Identities=18%  Similarity=0.172  Sum_probs=87.6

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++|+|+.|.|+|++++++||+++||+++....+      ..+.+..++.  .  +.+...........+.+ .+++|.|+
T Consensus         1 m~l~~i~i~V~di~~a~~FYe~~lg~~~~~~~~------~~~~~~~g~~--~--l~l~~~~~~~~~~~~~~-~~~~f~v~   69 (115)
T d2i7ra1           1 MNLNQLDIIVSNVPQVCADLEHILDKKADYAND------GFAQFTIGSH--C--LMLSQNHLVPLENFQSG-IIIHIEVE   69 (115)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHHHTSCCSEEET------TEEEEEETTE--E--EEEESSCSSSCCCCCSC-EEEEEECS
T ss_pred             CcceEEEEEECCHHHHHHHHHHhhCCceeeecC------CeEEEEEcCc--e--eeeeecccCCCCCCCcc-eEEEEEEC
Confidence            579999999999999999999999999866533      1355665532  2  33333332222223334 47899999


Q ss_pred             CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      |+++++++|+++|+.+..+|...++|... ++|+||+||+|||.+.
T Consensus        70 D~d~~~~~l~~~G~~i~~~~~~~~~g~~~-~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          70 DVDQNYKRLNELGIKVLHGPTVTDWGTES-LLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CHHHHHHHHHHHTCCEEEEEEECTTSCEE-EEEECGGGCEEEEEEC
T ss_pred             CHHHHHHHHHhhccccccceEEeeCCeEE-EEEECCCCCEEEEEEe
Confidence            99999999999999999888888887754 8999999999999875

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.79  E-value=1e-18  Score=129.73  Aligned_cols=130  Identities=22%  Similarity=0.326  Sum_probs=91.2

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEec--CCCCceeEEEeeccCCCC--------cc
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGF--GPEQSHFVVELTYNYGVT--------SY   87 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--------~~   87 (291)
                      +.|+.+|+||+|.|+|++++++||+++||+++.........+....+...  ........+++.......        +.
T Consensus         2 ~~m~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~   81 (145)
T d1jc4a_           2 EDLFICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKH   81 (145)
T ss_dssp             CCCCSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHT
T ss_pred             cccceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCccccccccc
Confidence            46799999999999999999999999999999877655554433333221  011112233333221111        11


Q ss_pred             cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecC-CcccCCCceEEEEE--ECCCCCEEEEEeCC
Q 022871           88 DIGTGFGHFAIATEDVYKLVENIRAKGGNVTRE-PGPLKGGTTHIAFV--KDPDGYIFELIQRG  148 (291)
Q Consensus        88 ~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~-~~~~~~g~~~~~~~--~dp~G~~iel~~~~  148 (291)
                      ....|++|+||.|+|+++++++|+++|+++... +....+|.. .+|+  +||+|++|||+|.+
T Consensus        82 ~~~~g~~Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~-~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          82 NGRAGLHHMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNR-INFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             TTCCEEEEEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCE-EEEBCGGGGTTSCEEEEECC
T ss_pred             CCCCcceEEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCE-EEEEeccCCCCeEEEEEECC
Confidence            245689999999999999999999999998654 344444444 3555  79999999999975

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.79  E-value=2.3e-18  Score=130.43  Aligned_cols=123  Identities=16%  Similarity=0.175  Sum_probs=92.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |...+++||+|.|+|++++++||+++|||++..+...........++..+........ ...       ....++.|++|
T Consensus         1 m~~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~h~~~   72 (162)
T d1mpya2           1 MAAVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAF-IHH-------PEKGRLHHVSF   72 (162)
T ss_dssp             TCCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEE-EEC-------SSSSEEEEEEE
T ss_pred             CCcccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccc-ccc-------CCCCccceeEE
Confidence            4577899999999999999999999999999887665555555555544332222211 111       12236899999


Q ss_pred             EeCCHH---HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           99 ATEDVY---KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v~d~~---~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .+.+++   +++++|+++|+.+...|.....+...++||+|||||.|||.....
T Consensus        73 ~~~~~~~~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          73 HLETWEDLLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             ECSCHHHHHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             EEeeehhhhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            997655   778999999999887777666555566999999999999998764

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.77  E-value=3.1e-18  Score=127.77  Aligned_cols=123  Identities=15%  Similarity=0.226  Sum_probs=89.8

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC-----------CcceeEEEecccCCCceeEEEeeee---cCcce
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----------EYKYTLAMLGYAEEDQTTVLELTYN---YGVTE  216 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~l~l~~~---~~~~~  216 (291)
                      ..++.|++|.|+|++++.+||++ |||++.......           +......++.....  ...+.+...   .....
T Consensus         7 ~~ri~Hv~i~v~Dle~s~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~l~~~~~~~~~~~   83 (149)
T d1ss4a_           7 LLRMDNVSIVVESLDNAISFFEE-IGLNLEGRANVEGEWAGRVTGLGSQCVEIAMMVTPDG--HSRIELSRFLTPPTIAD   83 (149)
T ss_dssp             EEEEEEEEEECSCHHHHHHHHHH-HTCEEEEEEEECSHHHHHHHSCCSCEEEEEEEECTTS--SCEEEEEEEEESCCCCB
T ss_pred             CCEEeEEEEEeCCHHHHHHHHHH-cCCcEeeeeccceeeeeeeeccCCCceeEEEEeeccc--ceEEEEEeeccccCccc
Confidence            45789999999999999999998 999977654321           22334555543332  333444332   11111


Q ss_pred             ----eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          217 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       217 ----~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                          .....++.|++|.|+|++++++++    ++.|+++..+|...++ +.+.+|++||||+.|||+|+
T Consensus        84 ~~~~~~~~~g~~hi~~~v~d~~~~~~~l----~~~G~~~~~~~~~~~~-~~~~~~~~DPdG~~iEl~e~  147 (149)
T d1ss4a_          84 HRTAPVNALGYLRVMFTVEDIDEMVSRL----TKHGAELVGEVVQYEN-SYRLCYIRGVEGILIGLAEE  147 (149)
T ss_dssp             CTTCCSSSBEEEEEEEEESCHHHHHHHH----HHTTCEESSCCEEETT-TEEEEEEECGGGCEEEEEEE
T ss_pred             ccccCCCCcceeEEEEeechhHHHHHHH----HHCCCeEccCCeECCC-CeEEEEEECCCCCEEEEEEc
Confidence                113347899999999999999999    9999999888877665 45789999999999999986

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.77  E-value=3.5e-18  Score=129.41  Aligned_cols=124  Identities=13%  Similarity=0.125  Sum_probs=89.7

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..+++||.|.|+|++++++||+++|||++.++...........+.........  ..+.. .     +..++..|++|.+
T Consensus         3 ~~rldHv~l~v~Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~-----~~~~~~~h~~~~~   74 (162)
T d1mpya2           3 AVRFDHALMYGDELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHD--VAFIH-H-----PEKGRLHHVSFHL   74 (162)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCS--EEEEE-C-----SSSSEEEEEEEEC
T ss_pred             cccccEEEEECCCHHHHHHHHHHccCCEEEEEEccccccceeeeeeccccccc--ccccc-c-----CCCCccceeEEEE
Confidence            35799999999999999999999999998877665555455555443332111  11111 1     1235789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      .++++..+ +.++|++.|+++..+|.++..++.+++|++|||||.|||+...+
T Consensus        75 ~~~~~~~~-~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          75 ETWEDLLR-AADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             SCHHHHHH-HHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             eeehhhhh-HHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence            88554332 23555999999988888876655689999999999999987543

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.76  E-value=4.7e-18  Score=123.86  Aligned_cols=120  Identities=18%  Similarity=0.233  Sum_probs=84.0

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCC-ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEE-KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      |+++|+|++|.|+|++++++||+++|||++..+.+.... .....++..+.    ..+.+.....    ....+..|++|
T Consensus         1 Mi~~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~~~~~~~~~~f   72 (130)
T d1r9ca_           1 MIEGLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGD----IWVAIMQGEK----LAERSYNHIAF   72 (130)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETT----EEEEEEECCC----CSSCCSCEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCC----EEEeeccccc----ccccceeeeee
Confidence            689999999999999999999999999999887544322 22334444332    2233322211    12236678998


Q ss_pred             Ee--CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 AT--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .+  +|+++++++|+++|+++...+....++.+ .+||+|||||+|||....
T Consensus        73 ~v~~~dv~~~~~~l~~~gv~i~~~~~~~~~~~~-~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          73 KIDDADFDRYAERVGKLGLDMRPPRPRVEGEGR-SIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             ECCGGGHHHHHHHHHHHTCCBCCCCC-----CC-EEEEECTTSCEEEEECCC
T ss_pred             cccHHHHHHHHHHHHHCCCeEecCCcccCCCEE-EEEEECCCCCEEEEEECC
Confidence            77  47999999999999998766554444444 489999999999997653

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1e-17  Score=128.62  Aligned_cols=128  Identities=29%  Similarity=0.517  Sum_probs=93.9

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCC-----------------ceeEEEeecc-
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQ-----------------SHFVVELTYN-   81 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~-   81 (291)
                      .--+++|++|.|+|++++++||+++|||++..+...+.+.....+...+...                 ....+..... 
T Consensus        20 ~~~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (176)
T d1qipa_          20 KDFLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGT   99 (176)
T ss_dssp             TTCEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTG
T ss_pred             cceEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecc
Confidence            3557999999999999999999999999999887777766666665433211                 1111111111 


Q ss_pred             --CCCCc----ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           82 --YGVTS----YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        82 --~~~~~----~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                        .....    .....|+.|+++.+.|+++++++|+++|+++...|.......  .+||+||||+.|||++..+
T Consensus       100 ~~~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~--~~f~~DPdG~~IElvq~~~  171 (176)
T d1qipa_         100 EDDETQSYHNGNSDPRGFGHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKG--LAFIQDPDGYWIEILNPNK  171 (176)
T ss_dssp             GGCTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTT--CEEEECTTCCEEEEECTTT
T ss_pred             ccccCcCccCCCCCccceeEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceE--EEEEECCCCCEEEEEeCCC
Confidence              11111    113348999999999999999999999999999887655433  3788999999999999864

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.76  E-value=9.4e-18  Score=127.93  Aligned_cols=121  Identities=18%  Similarity=0.209  Sum_probs=83.6

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..|++|+||+|.|+|++++.+||+++|||++..+.+.    . ..+...+...... +.+.............+++||+|
T Consensus         8 ~~I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~~----~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~HiAf   81 (170)
T d1zswa2           8 HQIQGMGSVELTVRRLDKMASTLTEIFGYTEVSRNDQ----E-AIFQSIKGEAFGE-IVVKYLDGPTEKPGRGSIHHLAI   81 (170)
T ss_dssp             GSCCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECSS----E-EEEESSTTCSTTC-EEEEECCSSBCBCCBTCEEEEEE
T ss_pred             HHhCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecCc----e-EEEEeccCccceE-EEeccccccccccCccccceEEE
Confidence            3589999999999999999999999999999877431    1 2222222222222 22222222222223337899999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .|+|   ++++++++.++|+.+. .+.+..  ....+||+|||||+|||+...
T Consensus        82 ~V~~~~~l~~~~~~l~~~G~~~~-~~~~~~--~~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          82 RVKNDAELAYWEEQVKQRGFHSS-GIIDRF--YFKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             EESSHHHHHHHHHHHHHTTCCCC-CCEECS--SEEEEEEECTTCCEEEEEEEE
T ss_pred             EeCChHHHHHHHHHHHhcCCCcc-ccccCC--CEEEEEEECCCCcEEEEEECC
Confidence            9976   7788999999999864 333333  334589999999999999854

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=2.6e-18  Score=128.32  Aligned_cols=132  Identities=18%  Similarity=0.245  Sum_probs=95.5

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCc-----ccCCCCe
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTS-----YDIGTGF   93 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~g~   93 (291)
                      ..+.+|+||+|.|+|++++++||+++|||++..+...+.+.....++.+......+.+.........+     ...+.|+
T Consensus         7 ~~~~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~   86 (149)
T d1sqia1           7 GRFLHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGV   86 (149)
T ss_dssp             CEEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEE
T ss_pred             CceeeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeE
Confidence            34899999999999999999999999999998876554443333333333333333332222111111     1246799


Q ss_pred             eEEEEEeCCHHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEeCCCC
Q 022871           94 GHFAIATEDVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus        94 ~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +||||.|+|+++++++|+++|+++..+|....+  |...+++++.|+|..++|+++...
T Consensus        87 ~hiaf~V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~  145 (149)
T d1sqia1          87 KDIAFEVEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINY  145 (149)
T ss_dssp             EEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESC
T ss_pred             EEEEEEeccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCC
Confidence            999999999999999999999998888766533  444567889999999999997653

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.75  E-value=7.7e-18  Score=128.21  Aligned_cols=131  Identities=21%  Similarity=0.232  Sum_probs=97.4

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCC------------CC
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYG------------VT   85 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~   85 (291)
                      ++.+.+++||+|.|+|++++++||+++|||++..+...+.+......+.++.....+.+.......            ..
T Consensus         7 ~~~i~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~   86 (167)
T d1sqda1           7 KFKVKRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASI   86 (167)
T ss_dssp             SSCEEEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCCSS
T ss_pred             CCCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCCCeeEEEecccccccccccccccccccc
Confidence            456999999999999999999999999999998886554443333333333333333332221100            00


Q ss_pred             c-----------ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           86 S-----------YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 ~-----------~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +           ...+.|+.||||.|+|+++++++|+++|+++..+|....++. ++++++.+++..++|+++..
T Consensus        87 ~~~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~-~~a~I~~~gd~~~~~v~r~~  160 (167)
T d1sqda1          87 PSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAV-TIAEVKLYGDVVLRYVSYKA  160 (167)
T ss_dssp             TTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTE-EEEEEEEETTEEEEEEEECC
T ss_pred             ccCCcchHHHhhhccCCCceEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCE-EEEEEEccCCcEEEEEecCC
Confidence            0           013568999999999999999999999999999998887654 45889999999999999864

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.75  E-value=7.8e-18  Score=127.63  Aligned_cols=131  Identities=20%  Similarity=0.251  Sum_probs=94.6

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCC------c--ccCC
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT------S--YDIG   90 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~~~   90 (291)
                      ..|.+|+||+|.|+|++++++||+++|||+++.....+........+.+......+.+.........      +  ...+
T Consensus         3 ~~i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g   82 (163)
T d1t47a1           3 FPVKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHG   82 (163)
T ss_dssp             SCCCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHC
T ss_pred             CCCceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCC
Confidence            4599999999999999999999999999999887654433222222222233333333222111110      0  1246


Q ss_pred             CCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccC--CCceEEEEEECCCCCEEEEEeCCC
Q 022871           91 TGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        91 ~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .|+.||||.|+|+++++++|+++|+++...|....  .|...++++++|+|..++|+++..
T Consensus        83 ~G~~hiaf~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~  143 (163)
T d1t47a1          83 DGVVDLAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTG  143 (163)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEE
T ss_pred             CceEEEEEeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccC
Confidence            79999999999999999999999999988876653  344567889999999999999753

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.75  E-value=2.5e-17  Score=122.19  Aligned_cols=129  Identities=14%  Similarity=0.147  Sum_probs=85.4

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-cceeEEEecccCCCceeEEEeeeecCcce-eccCcceeEEEE
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-YKYTLAMLGYAEEDQTTVLELTYNYGVTE-YTKGNAYAQVAI  228 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~l~~~~~~~~-~~~~~~~~h~~~  228 (291)
                      ...++||+|.|+|++++.+||+++||+++.......+ ......+...........+.+........ ....+++.|++|
T Consensus         4 i~gl~Hv~l~v~Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf   83 (144)
T d1zswa1           4 IKGHHHISMVTKNANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGL   83 (144)
T ss_dssp             CCSEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEE
T ss_pred             ccceeeEEEEeCCHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEE
Confidence            4679999999999999999999999999876654332 22233333322222334454443222221 223346899999


Q ss_pred             EecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechh
Q 022871          229 STDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNED  283 (291)
Q Consensus       229 ~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~  283 (291)
                      .|+|.++ ++.+.++|++.|+.+. .+....  +.+.+||+||||++|||+++++
T Consensus        84 ~v~~~~~-l~~~~~~l~~~gv~~~-~~~~~~--~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          84 LVPSEDS-LHYWKERFEKFDVKHS-EMTTYA--NRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             EESCHHH-HHHHHHHHHHTTCEEC-CSEEET--TEEEEEEECTTCCEEEEEECTT
T ss_pred             ecCCchh-HHHHhhhhhccceeee-CccccC--CeEEEEEECCCCCEEEEEEeCC
Confidence            9998332 3333344499999874 444443  3588999999999999998765

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.74  E-value=2.4e-18  Score=126.68  Aligned_cols=125  Identities=18%  Similarity=0.307  Sum_probs=87.5

Q ss_pred             CceeEEee----eCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEE
Q 022871          153 PLCQVMLR----VGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAI  228 (291)
Q Consensus       153 ~~~hv~l~----v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~  228 (291)
                      .+.|+.+.    |+|++++.+||+++|||++........ .+.+.++..+.  ....+.+....+......+.+..|++|
T Consensus         5 ~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~~-~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~hlaf   81 (137)
T d1twua_           5 SFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQHN-GYDGVMFGLPH--ADYHLEFTQYEGGSTAPVPHPDSLLVF   81 (137)
T ss_dssp             SCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEET-TEEEEEEESSS--SSEEEEEEEETTCCCCCCCCTTCEEEE
T ss_pred             CCceEEEEEecccCCHHHHHHHHHhccCCceeeeecccc-ceeEEEecCCC--CceeeecccccccccccccccCceEEE
Confidence            45555555    479999999999999999876554333 35566665433  245566655544433344556789999


Q ss_pred             Eecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022871          229 STDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       229 ~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~  286 (291)
                      .|+|   +++++++|    +++|++++.++.. ++ +.+.+||+||||++|||.+.+...+
T Consensus        82 ~v~~~~dv~~~~~~l----~~~G~~~~~~~~~-~~-~~~~~~f~DPDG~~Iel~~~~~~~~  136 (137)
T d1twua_          82 YVPNAVELAAITSKL----KHMGYQEVESENP-YW-SNGGVTIEDPDGWRIVFMNSKGISG  136 (137)
T ss_dssp             ECCCHHHHHHHHHHH----HHTTCCEECCSSH-HH-HSSEEEEECTTCCEEEEESSCCCCC
T ss_pred             EeCCHHHHHHHHHHH----HHCCCeEeCCCCC-CC-CceEEEEECCCCCEEEEEcCCCCcC
Confidence            9887   44555555    9999998876543 22 3578999999999999998876554

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.74  E-value=2.4e-17  Score=122.51  Aligned_cols=117  Identities=20%  Similarity=0.250  Sum_probs=86.3

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .|++|+||.|.|+|++++++||+++|||++..+...      ..++........+.+.+...       ..+++.|++|.
T Consensus        13 ~i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-------~~~~~~h~~~~   79 (146)
T d1f1ua1          13 DIVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDEN------TIYLRSLEEFIHHNLVLRQG-------PIAAVAAFAYR   79 (146)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECSS------EEEEECTTCCSSCSEEEEEC-------SSCEEEEEEEE
T ss_pred             CCcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecCC------ceeeecccccccceeecccc-------CCCCCceeeEe
Confidence            499999999999999999999999999999876431      23333222222222222211       23478999999


Q ss_pred             eC---CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871          100 TE---DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus       100 v~---d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +.   |+++++++|+++|+.+...+.....|....+||+||+|+.|||....+
T Consensus        80 ~~~~~dl~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e  132 (146)
T d1f1ua1          80 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETE  132 (146)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             eccchhHHHHHHHHHHcCCceeeccccccCCceEEEEEECCCCcEEEEEEecc
Confidence            96   688899999999999876666655554445899999999999987643

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.74  E-value=2e-17  Score=126.11  Aligned_cols=122  Identities=14%  Similarity=0.040  Sum_probs=82.4

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ...++||+|.|+|++++.+||+++|||++.....    ....+....+..  ...+.+.....+...+..++++|++|.|
T Consensus        10 I~Gl~HV~L~V~Dle~s~~FY~~vLG~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~HiAf~V   83 (170)
T d1zswa2          10 IQGMGSVELTVRRLDKMASTLTEIFGYTEVSRND----QEAIFQSIKGEA--FGEIVVKYLDGPTEKPGRGSIHHLAIRV   83 (170)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEESSTTCS--TTCEEEEECCSSBCBCCBTCEEEEEEEE
T ss_pred             hCCeeeEEEEeCCHHHHHHHHHHHhCCEEEeecC----ceEEEEeccCcc--ceEEEeccccccccccCccccceEEEEe
Confidence            3568999999999999999999999999876532    133333332222  2222222222222223344789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +| .+.+..+.+++++.|+++. ++..+.+  ++.+||+|||||+|||+...
T Consensus        84 ~~-~~~l~~~~~~l~~~G~~~~-~~~~~~~--~~s~Yf~DPdG~~iEl~t~~  131 (170)
T d1zswa2          84 KN-DAELAYWEEQVKQRGFHSS-GIIDRFY--FKSLYFRESNGILFEIATDG  131 (170)
T ss_dssp             SS-HHHHHHHHHHHHHTTCCCC-CCEECSS--EEEEEEECTTCCEEEEEEEE
T ss_pred             CC-hHHHHHHHHHHHhcCCCcc-ccccCCC--EEEEEEECCCCcEEEEEECC
Confidence            88 4444555666699999864 4444333  58899999999999998753

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.73  E-value=2.4e-17  Score=120.22  Aligned_cols=113  Identities=16%  Similarity=0.198  Sum_probs=85.7

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      |++|.||+|.|+|++++.+||+++|||++..+.+      ..++++.+.....+.+  ...       ..+++.|++|.|
T Consensus         2 I~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~l--~~~-------~~~~~~h~~f~v   66 (131)
T d1lgta1           2 IRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSRAWRIAV--QQG-------EVDDLAFAGYEV   66 (131)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEE--EEC-------TTCEEEEEEEEE
T ss_pred             cccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCCceEEEE--ecC-------CCCCceEEEEEE
Confidence            7899999999999999999999999999987643      2466776543333333  221       234789999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcccC--CCceEEEEEECCCCCEEEEEeCC
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPLK--GGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~--~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .   |+++++++|+++|+++...+....  .+...++||+||+||+||+....
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          67 ADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             SSHHHHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence            5   567889999999999887664431  22334588999999999998764

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.73  E-value=3.7e-17  Score=119.92  Aligned_cols=127  Identities=43%  Similarity=0.706  Sum_probs=89.7

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .++.|++|.|+|++++++||+++|||++.............................................++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            47899999999999999999999999988776555544444443322221122222222222222234446778999999


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhh
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~  287 (291)
                      ++.+.++.+    ...++++...+.     +.+++||+|||||+|||++..+..++
T Consensus        82 ~~~~~~~~~----~~~~~~~~~~~~-----g~~~~~~~DPdGn~iEl~~~~~~~~~  128 (139)
T d2c21a1          82 DVKELVADM----RKHDVPIDYEDE-----SGFMAFVVDPDGYYIELLNEKTMMEK  128 (139)
T ss_dssp             CHHHHHHHH----HHTTCCEEEECS-----SSSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred             hHHHHHHHH----HHcCCceeeCCC-----CcEEEEEECCCCCEEEEEECCCCCCc
Confidence            999999998    889988766543     35889999999999999997765543

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.73  E-value=2.1e-17  Score=122.47  Aligned_cols=128  Identities=14%  Similarity=0.141  Sum_probs=89.5

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecc--cCCCceeEEEeeeecCcce--------eccC
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGY--AEEDQTTVLELTYNYGVTE--------YTKG  220 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~l~~~~~~~~--------~~~~  220 (291)
                      ..+++||+|.|+|++++.+||+++||+.+.........+........  ........+++........        ....
T Consensus         5 ~~~i~Hi~i~v~Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~   84 (145)
T d1jc4a_           5 FICIDHVAYACPDADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGR   84 (145)
T ss_dssp             CSEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTC
T ss_pred             ceEEeEEEEEeCCHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCC
Confidence            35689999999999999999999999998766554443332222211  1122345677765443321        1234


Q ss_pred             cceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEE--ECCCCCeEEEEech
Q 022871          221 NAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSF--VDPDGWKTVLVDNE  282 (291)
Q Consensus       221 ~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~--~Dp~G~~iel~~~~  282 (291)
                      .|+.|++|.|+|+++++++|    +++|++++.++......+.+.+|+  +||+|++|||+|.+
T Consensus        85 ~g~~Hia~~v~di~~~~~~l----~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          85 AGLHHMAWRVDDIDAVSATL----RERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             CEEEEEEEECSCHHHHHHHH----HHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             CcceEEEEecchHHHHHHHH----HHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            58999999999999999999    999999876543332223345555  79999999999963

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.73  E-value=3.5e-17  Score=125.02  Aligned_cols=130  Identities=17%  Similarity=0.162  Sum_probs=97.2

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCC-------------
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVT-------------   85 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------   85 (291)
                      ..+.+++||+|.|+|++++++||+++|||+++.+.....+........+++....+.+.........             
T Consensus         9 ~~i~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (172)
T d1sp8a1           9 FHTLAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSAAA   88 (172)
T ss_dssp             SCEEEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCHHH
T ss_pred             CCcCEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccCCeeeEEeeccCCCchhhhcccccCCcch
Confidence            4689999999999999999999999999999987655444333333333333444433222211100             


Q ss_pred             --c--ccCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           86 --S--YDIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        86 --~--~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                        .  ...+.|+.||||.|+|+++++++|+++|+++..+|.+..+|. ++++++.|.+..++|++..+
T Consensus        89 ~~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~-~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          89 ARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGF-RLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             HHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTE-EEEEEEEETTEEEEEEECCT
T ss_pred             hhhhhhhcCCceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCE-EEEEEECCCCcEEEEEecCC
Confidence              0  014669999999999999999999999999999888877754 56889999998999999885

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.72  E-value=8.4e-17  Score=118.67  Aligned_cols=116  Identities=20%  Similarity=0.326  Sum_probs=83.8

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      |+++|+||+|.|+|++++.+||+++|||++..+...      ..++..++  ....+.+....... .....+..|++|.
T Consensus         1 Mi~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~------~~~~~~~~--~~~~l~~~~~~~~~-~~~~~~~~h~~~~   71 (140)
T d1npba_           1 MLQSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT------GAYLTCGD--LWVCLSYDEARQYV-PPQESDYTHYAFT   71 (140)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT------EEEEEETT--EEEEEEECTTCCCC-CGGGSCSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc------cccccccc--ccceeecccccccC-CCcCCccceeeee
Confidence            689999999999999999999999999999876542      34444432  23333333222221 1223367788888


Q ss_pred             e--CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          100 T--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +  +|+++++++|+++|+++...+.   ++.. .+||+|||||.|||....
T Consensus        72 ~~~~d~~~~~~~l~~~Gv~~~~~~~---~~~~-~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          72 VAEEDFEPLSQRLEQAGVTIWKQNK---SEGA-SFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEEECCC---SSSE-EEEEECTTCCEEEEEECC
T ss_pred             chHHHHHHHHHHHHHCCCeEeecCC---CCce-EEEEECCCCCEEEEEECC
Confidence            7  6899999999999999876543   2333 488999999999997654

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.72  E-value=4.9e-17  Score=118.64  Aligned_cols=113  Identities=15%  Similarity=0.162  Sum_probs=85.7

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEe
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIAT  100 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v  100 (291)
                      |++|+||+|.|+|++++.+||+++|||++..+..      ...++..++....+.+.  ..       ...++.|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~~~~l~~~--~~-------~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQRAWRIAVQ--PG-------ELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSBSCSEEEE--EC-------TTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeecceeeeee--cc-------CCCCceEEEEEe
Confidence            7899999999999999999999999999987654      24667765443333332  11       234789999999


Q ss_pred             C---CHHHHHHHHHHcCCeEecCCcccCC--CceEEEEEECCCCCEEEEEeCC
Q 022871          101 E---DVYKLVENIRAKGGNVTREPGPLKG--GTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       101 ~---d~~~~~~~l~~~G~~~~~~~~~~~~--g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      .   |++++.++++++|+++...+.....  +....+||+||+||+|||+...
T Consensus        67 ~~~~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          67 DDAAALERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             SSHHHHHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             ccHHHHHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence            5   5788999999999998876654321  1223589999999999999765

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.72  E-value=5.3e-17  Score=124.37  Aligned_cols=121  Identities=18%  Similarity=0.178  Sum_probs=89.0

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..+|+||+|.|+|++++++|| ++|||++.++....++.....++.....  ...+.+..       ...++..|++|.+
T Consensus         3 i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~--~~~l~~~~-------~~~~~~~H~~f~~   72 (176)
T d1f1ua2           3 LVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQT--VHDTALTG-------GNGPRMHHVAFAT   72 (176)
T ss_dssp             CCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSS--SCSEEEEE-------SSBSEEEEEEEEC
T ss_pred             eeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCcc--ccceeccc-------ccCCCccceeEEe
Confidence            467999999999999999999 6899999887766665556666664332  34444432       1235789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCe--eecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 DDVYKSAEVVNLVTQELGGK--ITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~--~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      .+++...+.+ ++|+++|+.  ....|.++..+.+.++||+|||||+|||+...
T Consensus        73 ~~~~~v~~~~-~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~  125 (176)
T d1f1ua2          73 HEKHNIIQIC-DKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  125 (176)
T ss_dssp             SSHHHHHHHH-HHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             ccchhHHHHH-HHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCC
Confidence            9866555443 445888985  44667777665568899999999999998744

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=3.8e-17  Score=115.90  Aligned_cols=111  Identities=16%  Similarity=0.155  Sum_probs=76.7

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      +++.||.|.|+|++++.+||+++|||++.....   . . +.++.. +.  ...+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~---~-~-~~~~~~-~~--~~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRG---N-A-FAVMRD-ND--GFILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEET---T-T-EEEEEC-TT--CCEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeec---C-c-ceeeee-cc--eeeeeeeeeecc----cccccceeeeeec
Confidence            678999999999999999999999999876532   1 2 222331 21  344555443222    2346789999998


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      |.+ .++.+.++++++|+++..+|..    +++.+|++||||++|||+
T Consensus        70 ~~~-~v~~~~~~l~~~G~~~~~~~~~----~~~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEE-QVDKINQRLKEDGFLVEPPKHA----HAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCCCCEEC-----CEEEEEEETTTEEEEEE
T ss_pred             ccc-chhhhhhhHHHcCCccccCCCC----ceEEEEEECCCCCEEEEE
Confidence            833 3333345559999997655432    358899999999999985

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.71  E-value=8.3e-17  Score=114.09  Aligned_cols=108  Identities=19%  Similarity=0.259  Sum_probs=77.2

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      ++|+||.|.|+|++++.+||+++|||++..+...     ..+++. ++..  ..+.+......    ..++..|++|.|+
T Consensus         2 m~i~Hi~l~v~Dl~~a~~FY~~~lG~~~~~~~~~-----~~~~~~-~~~~--~~~~~~~~~~~----~~~~~~h~~f~v~   69 (113)
T d1xqaa_           2 MGIKHLNLTVADVVAAREFLEKYFGLTCSGTRGN-----AFAVMR-DNDG--FILTLMKGKEV----QYPKTFHVGFPQE   69 (113)
T ss_dssp             CCCCEEEEEESCHHHHHHHHHHHHCCEEEEEETT-----TEEEEE-CTTC--CEEEEEECSSC----CCCTTCCEEEECS
T ss_pred             CcccEEEEEeCCHHHHHHHHHHhhCCEEEEeecC-----cceeee-ecce--eeeeeeeeecc----cccccceeeeeec
Confidence            6789999999999999999999999999876532     123333 2222  23333332211    2336789999998


Q ss_pred             C---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |   +++++++++++|+++...+.  .. . ..+||+||+|++|||.
T Consensus        70 ~~~~v~~~~~~l~~~G~~~~~~~~--~~-~-~~~~~~DPdG~~iEi~  112 (113)
T d1xqaa_          70 SEEQVDKINQRLKEDGFLVEPPKH--AH-A-YTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             SHHHHHHHHHHHHHTTCCCCCCEE--C--C-EEEEEEETTTEEEEEE
T ss_pred             cccchhhhhhhHHHcCCccccCCC--Cc-e-EEEEEECCCCCEEEEE
Confidence            6   67789999999998765433  22 2 3488999999999985

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.71  E-value=3.3e-16  Score=114.72  Aligned_cols=122  Identities=57%  Similarity=0.937  Sum_probs=87.1

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +||.|++|.|+|++++++||+++|||++..+.......................................+..++++.++
T Consensus         2 ~r~~Hv~l~V~Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (139)
T d2c21a1           2 RRMLHTMIRVGDLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVE   81 (139)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEES
T ss_pred             CceEEEEEEeCCHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehh
Confidence            58999999999999999999999999998876655544444444333222222222222222223334456778899999


Q ss_pred             CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      ++.+.++++...++.+...+    ++.. ++||+|||||+|||++..
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~----~g~~-~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          82 DVKELVADMRKHDVPIDYED----ESGF-MAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             CHHHHHHHHHHTTCCEEEEC----SSSS-EEEEECTTSCEEEEEEHH
T ss_pred             hHHHHHHHHHHcCCceeeCC----CCcE-EEEEECCCCCEEEEEECC
Confidence            99999999999998876542    2333 589999999999999854

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.70  E-value=2e-16  Score=115.73  Aligned_cols=112  Identities=22%  Similarity=0.329  Sum_probs=78.8

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      ||++|+||+|.|+|++++.+||+++||+++..+.+.      ..++..+..  .  +........  .....+..|++|.
T Consensus         1 mi~~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~------~~~~~~~~~--~--~~~~~~~~~--~~~~~~~~h~~~~   68 (134)
T d1nkia_           1 MLTGLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ------GAYLELGSL--W--LCLSREPQY--GGPAADYTHYAFG   68 (134)
T ss_dssp             CEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT------EEEEEETTE--E--EEEEECTTC--CCCCSSSCEEEEE
T ss_pred             CCCcEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc------eeeeecCCe--E--EEEeeeccc--cccccccccchhc
Confidence            689999999999999999999999999999877542      344544432  1  222211111  1122245566655


Q ss_pred             e--CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871          100 T--EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       100 v--~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +  +|+++++++|+++|+.+...+.  . +.. .+||+|||||+|||...
T Consensus        69 ~~~~dl~~~~~~l~~~G~~~~~~~~--~-~~~-~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          69 IAAADFARFAAQLRAHGVREWKQNR--S-EGD-SFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEECCC--S-SSC-EEEEECTTCCEEEEESC
T ss_pred             cccchHHHHHHHHHHCCCcCccCCC--c-cee-EEEEECCCCCEEEEEEC
Confidence            5  7899999999999999865432  2 233 48899999999999754

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=1.2e-16  Score=122.51  Aligned_cols=128  Identities=28%  Similarity=0.483  Sum_probs=90.6

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCC-----------------ceeEEEeeeecCc
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEED-----------------QTTVLELTYNYGV  214 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~l~l~~~~~~  214 (291)
                      -+++|++|.|+|+++|++||+++|||++............+.+.......                 ....+........
T Consensus        22 ~~l~Hi~l~V~Dl~~si~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (176)
T d1qipa_          22 FLLQQTMLRVKDPKKSLDFYTRVLGMTLIQKCDFPIMKFSLYFLAYEDKNDIPKEKDEKIAWALSRKATLELTHNWGTED  101 (176)
T ss_dssp             CEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESCCGGGSCSSHHHHHHHHTTSSSEEEEEEETTGGG
T ss_pred             eEEeEEEEEeCCHHHHHHHHHHhhCCeEeeeecccCCceEEEEeecCCccccccccccccccccccccceeEEEeecccc
Confidence            35899999999999999999999999987665555544555544322210                 0111111111100


Q ss_pred             --c-e----eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhh
Q 022871          215 --T-E----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFL  285 (291)
Q Consensus       215 --~-~----~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~  285 (291)
                        . .    .....++.|+++.++|++++.++|    ++.|+++..+|...+.  .+.+|++||||+.|||+|++...
T Consensus       102 ~~~~~~~~~~~~~~g~~h~~~~~~d~~~~~~~l----~~~Gv~~~~~p~~g~~--~~~~f~~DPdG~~IElvq~~~~~  173 (176)
T d1qipa_         102 DETQSYHNGNSDPRGFGHIGIAVPDVYSACKRF----EELGVKFVKKPDDGKM--KGLAFIQDPDGYWIEILNPNKMA  173 (176)
T ss_dssp             CTTCCCBCSSSSSCBEEEEEEECSCHHHHHHHH----HHTTCEEEECTTSSSS--TTCEEEECTTCCEEEEECTTTGG
T ss_pred             ccCcCccCCCCCccceeEEEeeHHHHHHHHHHH----HHCCCEEeeCCccCCc--eEEEEEECCCCCEEEEEeCCCCC
Confidence              0 0    112348899999999999999999    9999999998876544  46789999999999999987643

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.70  E-value=6e-17  Score=120.37  Aligned_cols=119  Identities=19%  Similarity=0.178  Sum_probs=83.9

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..++.||.|.|+|++++++||+++|||++.....  +  .. .+... .......+.+..       ...+++.|++|.+
T Consensus        14 i~rl~hv~l~v~Dl~~s~~FY~~~lG~~~~~~~~--~--~~-~~~~~-~~~~~~~~~~~~-------~~~~~~~h~~~~~   80 (146)
T d1f1ua1          14 IVRCAYMEIVVTDLAKSREFYVDVLGLHVTEEDE--N--TI-YLRSL-EEFIHHNLVLRQ-------GPIAAVAAFAYRV   80 (146)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHTTTTCCEEEEECS--S--EE-EEECT-TCCSSCSEEEEE-------CSSCEEEEEEEEE
T ss_pred             CcEEeEEEEEeCCHHHHHHHHHhccCcEEEeecC--C--ce-eeecc-cccccceeeccc-------cCCCCCceeeEee
Confidence            3568999999999999999999999999876422  1  22 22221 221222232322       1235788999999


Q ss_pred             cc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022871          231 DD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       231 ~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~  286 (291)
                      .+   ++++.++|    +++|+++...|.....+.++.+||+||+|++|||+...+..+
T Consensus        81 ~~~~dl~~~~~~l----~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~~~  135 (146)
T d1f1ua1          81 KSPAEVDAAEAYY----KELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEHVE  135 (146)
T ss_dssp             SSHHHHHHHHHHH----HHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCCCC
T ss_pred             ccchhHHHHHHHH----HHcCCceeeccccccCCceEEEEEECCCCcEEEEEEeccccC
Confidence            75   44555555    999999988887776655689999999999999998655433

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.70  E-value=1.2e-16  Score=112.89  Aligned_cols=107  Identities=15%  Similarity=0.106  Sum_probs=78.8

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      +..|.|+|++++++||+++|||++....+    .+..+...  .  ....+.......    ..++...|++|.++|+++
T Consensus         5 ~~~l~v~d~~~a~~FY~~~lG~~~~~~~~----~~~~~~~~--~--~~~~~~~~~~~~----~~~~~~~~~~~~~~dvd~   72 (111)
T d2pjsa1           5 VANIATPEPARAQAFYGDILGMPVAMDHG----WIVTHASP--L--EAHAQVSFAREG----GSGTDVPDLSIEVDNFDE   72 (111)
T ss_dssp             EEEEECSCGGGGHHHHTTTTCCCEEEECS----SEEEEEEE--E--EEEEEEEEESSS----BTTBCCCSEEEEESCHHH
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeeccc----ceeEeccc--c--ccceeeeccccc----CCCCceeEEEEEecCHHH
Confidence            56799999999999999999999765432    12222211  1  111111111111    233466799999999999


Q ss_pred             hHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          236 SAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       236 ~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      .++++    +++|+++..+|...++ +.+.+|++||+||+|||+
T Consensus        73 ~~~~l----~~~g~~~~~~p~~~~~-g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          73 VHARI----LKAGLPIEYGPVTEAW-GVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             HHHHH----HHTTCCCSEEEEECTT-SCEEEEEECTTSCEEEEE
T ss_pred             HHHHH----HhhccccccCCeEcCC-CcEEEEEECCCCCEEEeC
Confidence            99999    9999999999998887 468999999999999985

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.70  E-value=4.6e-17  Score=120.82  Aligned_cols=119  Identities=21%  Similarity=0.273  Sum_probs=81.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      +.|++|+||.|.|+|++++.+||+++|||++..+....     ..+.............+...       ..++..|+++
T Consensus         3 ~~i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~   70 (145)
T d1mpya1           3 KGVMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG-----RVYLKAWTEVDKFSLVLREA-------DEPGMDFMGF   70 (145)
T ss_dssp             TSEEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS-----CEEEECTTCCBSCSEEEEEC-------SSCEEEEEEE
T ss_pred             cCCcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC-----ccceecccccceeecccccc-------Ccccceeeee
Confidence            35899999999999999999999999999988764321     12222222222222222221       1124556666


Q ss_pred             Ee---CCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           99 AT---EDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        99 ~v---~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      .+   +|+++++++|+++|+++...+.....|....+||+||+||.|||+....
T Consensus        71 ~~~~~~dl~~~~~~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          71 KVVDEDALRQLERDLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             EESCHHHHHHHHHHHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             eehhHHHHHHHHHHHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            55   5789999999999999876554443334345999999999999997543

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.70  E-value=1.1e-16  Score=117.53  Aligned_cols=124  Identities=18%  Similarity=0.293  Sum_probs=86.4

Q ss_pred             ceeeeEEEEE----eCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEE
Q 022871           21 KRRFLHAVYR----VGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHF   96 (291)
Q Consensus        21 ~~~i~hv~l~----v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i   96 (291)
                      +.+|.|+.|.    |+|++++.+||+++|||++..+.... .++..+++..+...  +.+.+...........+.+..|+
T Consensus         3 ~~~~~~~~~RVa~pv~Dle~s~~FY~~vLG~~~~~~~~~~-~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~hl   79 (137)
T d1twua_           3 FSSFQAAQIRIARPTGQLDEIIRFYEEGLCLKRIGEFSQH-NGYDGVMFGLPHAD--YHLEFTQYEGGSTAPVPHPDSLL   79 (137)
T ss_dssp             CSSCBCSCEEEEEECSCHHHHHHHHTTTSCCCEEEEEEEE-TTEEEEEEESSSSS--EEEEEEEETTCCCCCCCCTTCEE
T ss_pred             cCCCceEEEEEecccCCHHHHHHHHHhccCCceeeeeccc-cceeEEEecCCCCc--eeeecccccccccccccccCceE
Confidence            4455555555    57999999999999999998775443 34556666654433  34444443333333344467899


Q ss_pred             EEEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCC
Q 022871           97 AIATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGP  149 (291)
Q Consensus        97 ~~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~  149 (291)
                      +|.|+|   +++++++|+++|+++..++.... +.. .+||+||||++|||+....
T Consensus        80 af~v~~~~dv~~~~~~l~~~G~~~~~~~~~~~-~~~-~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          80 VFYVPNAVELAAITSKLKHMGYQEVESENPYW-SNG-GVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             EEECCCHHHHHHHHHHHHHTTCCEECCSSHHH-HSS-EEEEECTTCCEEEEESSCC
T ss_pred             EEEeCCHHHHHHHHHHHHHCCCeEeCCCCCCC-Cce-EEEEECCCCCEEEEEcCCC
Confidence            999876   77889999999999887654333 333 3889999999999997653

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.69  E-value=9.9e-17  Score=113.26  Aligned_cols=110  Identities=19%  Similarity=0.254  Sum_probs=81.1

Q ss_pred             eeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           22 RRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        22 ~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      +++ +..|.|+|++++.+||+++|||++....+.      ...+..+. .....+......     ..+.+..|++|.++
T Consensus         2 ~ri-~~~l~v~d~~~a~~FY~~~lG~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~   68 (111)
T d2pjsa1           2 RRV-VANIATPEPARAQAFYGDILGMPVAMDHGW------IVTHASPL-EAHAQVSFAREG-----GSGTDVPDLSIEVD   68 (111)
T ss_dssp             EEE-EEEEECSCGGGGHHHHTTTTCCCEEEECSS------EEEEEEEE-EEEEEEEEESSS-----BTTBCCCSEEEEES
T ss_pred             eEE-EEEEEeCCHHHHHHHHHHhhCCceeecccc------eeEecccc-ccceeeeccccc-----CCCCceeEEEEEec
Confidence            455 588999999999999999999998766431      22232222 112222222211     12235568999999


Q ss_pred             CHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEE
Q 022871          102 DVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELI  145 (291)
Q Consensus       102 d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~  145 (291)
                      |+++++++++++|+++..+|...++|.+. ++++||+||+|||+
T Consensus        69 dvd~~~~~l~~~g~~~~~~p~~~~~g~~~-~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          69 NFDEVHARILKAGLPIEYGPVTEAWGVQR-LFLRDPFGKLINIL  111 (111)
T ss_dssp             CHHHHHHHHHHTTCCCSEEEEECTTSCEE-EEEECTTSCEEEEE
T ss_pred             CHHHHHHHHHhhccccccCCeEcCCCcEE-EEEECCCCCEEEeC
Confidence            99999999999999998888888887665 89999999999986

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.68  E-value=1.9e-16  Score=115.21  Aligned_cols=117  Identities=18%  Similarity=0.216  Sum_probs=79.9

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc-ceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-KYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      .+.|++|.|+|++++.+||+++|||++......... .....++...    ...+.+....+    ....+..|++|.++
T Consensus         4 ~i~Hi~l~v~d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~~~f~v~   75 (130)
T d1r9ca_           4 GLSHMTFIVRDLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIG----DIWVAIMQGEK----LAERSYNHIAFKID   75 (130)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEET----TEEEEEEECCC----CSSCCSCEEEEECC
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecC----CEEEeeccccc----ccccceeeeeeccc
Confidence            589999999999999999999999998765443321 1122222211    23444433222    12346678999774


Q ss_pred             --chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          232 --DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       232 --di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                        |++++++++    +++|+++..++....+ +++.+||+|||||+|||...+
T Consensus        76 ~~dv~~~~~~l----~~~gv~i~~~~~~~~~-~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          76 DADFDRYAERV----GKLGLDMRPPRPRVEG-EGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             GGGHHHHHHHH----HHHTCCBCCCCC------CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHHHH----HHCCCeEecCCcccCC-CEEEEEEECCCCCEEEEEECC
Confidence              677777777    9999998777655544 358899999999999998754

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=7.3e-17  Score=120.33  Aligned_cols=128  Identities=16%  Similarity=0.199  Sum_probs=93.2

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcc--eeEEEecccCCCceeEEEeeeecCcce-------eccCcc
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYK--YTLAMLGYAEEDQTTVLELTYNYGVTE-------YTKGNA  222 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~l~~~~~~~~-------~~~~~~  222 (291)
                      ..++||+|.|+|++++.+||+++|||++..........  .....+.  ..  ...+++........       ...+.+
T Consensus        10 ~~~dHi~i~V~Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~l~~~~~~~~~~~~~~~~~~g~G   85 (149)
T d1sqia1          10 LHFHSVTFWVGNAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIK--QG--KIVFVLCSALNPWNKEMGDHLVKHGDG   85 (149)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEE--ET--TEEEEEEEESSTTCHHHHHHHHHHCSE
T ss_pred             eeEeEEEEEcCCHHHHHHHHhhccceEEEEEecccCCceEEEEEEec--CC--cEEEEEEeccCCCCchhhhhhhhCCCe
Confidence            35889999999999999999999999987655433322  2222233  21  34555544332211       124679


Q ss_pred             eeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCC--ceEEEEECCCCCeEEEEechhhhhh
Q 022871          223 YAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       223 ~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~Dp~G~~iel~~~~~~~~~  287 (291)
                      +.|+||.|+|++++++++    +++|++++.+|......+  .++++++.|.|..++|+|+..+.++
T Consensus        86 ~~hiaf~V~di~~~~~~l----~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~~~g~  148 (149)
T d1sqia1          86 VKDIAFEVEDCEHIVQKA----RERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKINYTGR  148 (149)
T ss_dssp             EEEEEEEEECHHHHHHHH----HHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEESCCSS
T ss_pred             EEEEEEEeccHHHHHHHH----HHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCCCcCC
Confidence            999999999999999999    999999999886643222  2567889999999999999887654

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.68  E-value=1.7e-16  Score=117.70  Aligned_cols=118  Identities=15%  Similarity=0.184  Sum_probs=78.9

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      .+++.||.|.|+|++++.+||+++|||++..+....   .... ... .......+.+.. .      ..++..|+++.+
T Consensus         5 i~rl~Hv~l~v~D~~~s~~FY~~vLG~~~~~~~~~~---~~~~-~~~-~~~~~~~~~~~~-~------~~~~~~~~~~~~   72 (145)
T d1mpya1           5 VMRPGHVQLRVLDMSKALEHYVELLGLIEMDRDDQG---RVYL-KAW-TEVDKFSLVLRE-A------DEPGMDFMGFKV   72 (145)
T ss_dssp             EEEEEEEEEEESCHHHHHHHHHHTTCCEEEEECTTS---CEEE-ECT-TCCBSCSEEEEE-C------SSCEEEEEEEEE
T ss_pred             CcEeeeEEEEeCCHHHHHHHHHHhhCCEEEEeeccC---ccce-ecc-cccceeeccccc-c------Ccccceeeeeee
Confidence            356899999999999999999999999987653221   1121 111 111222232222 1      123455666665


Q ss_pred             c---chhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          231 D---DVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       231 ~---di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      .   |++++.++|    +++|+++...|.....+.++.+||+|||||.|||++..+.
T Consensus        73 ~~~~dl~~~~~~L----~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e~  125 (145)
T d1mpya1          73 VDEDALRQLERDL----MAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKEY  125 (145)
T ss_dssp             SCHHHHHHHHHHH----HHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBCB
T ss_pred             hhHHHHHHHHHHH----HHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEeccc
Confidence            4   455555555    9999998877766544345899999999999999986554

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.67  E-value=2.8e-16  Score=113.93  Aligned_cols=116  Identities=21%  Similarity=0.204  Sum_probs=80.1

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeec------CcceeccCcceeEE
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNY------GVTEYTKGNAYAQV  226 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~------~~~~~~~~~~~~h~  226 (291)
                      ++.|++|.|.|++++.+||++ |||.+........  +......  .   ...+.+....      +....+.+.+..|+
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~--~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   73 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP--HTEAVLD--G---GIRLAWDTVETVRSYDPEWQAPTGGHRFAI   73 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS--EEEEECG--G---GCEEEEEEHHHHHHHCTTCCCCCSSCSCEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc--ceeeecc--c---eeeeeecccccccccCCCCCCCccccceeE
Confidence            689999999999999999977 8998665443322  2222222  1   2233332210      11111233355799


Q ss_pred             EEEecc---hhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          227 AISTDD---VYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       227 ~~~v~d---i~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +|.|++   ++++++++    +++|+++..+|...++ |.+.+|++|||||+|||+++
T Consensus        74 ~~~v~~~~~l~~~~~~l----~~~G~~~~~~p~~~~~-G~~~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          74 AFEFPDTASVDKKYAEL----VDAGYEGHLKPWNAVW-GQRYAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             EEECSSHHHHHHHHHHH----HHTTCEEEEEEEECTT-SEEEEEEECTTSCEEEEEEE
T ss_pred             eeeeccchhhHHHHHHH----HhccCccccCCeEcCC-CcEEEEEECCCCCEEEEEec
Confidence            999987   44556666    9999999999988887 46899999999999999875

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.67  E-value=2.5e-16  Score=114.73  Aligned_cols=113  Identities=16%  Similarity=0.132  Sum_probs=78.8

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEec
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTD  231 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~  231 (291)
                      ..+.||.|.|+|++++++||+++|||++.....      ...+++.+..  +..+.+..       ...+++.|++|.|.
T Consensus         3 ~~l~hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~l~~-------~~~~~~~h~~f~v~   67 (131)
T d1lgta1           3 RSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTD------NGDLFRIDSR--AWRIAVQQ-------GEVDDLAFAGYEVA   67 (131)
T ss_dssp             EEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEES
T ss_pred             ccccEEEEEeCCHHHHHHHHHHhhCCceeecCC------cceEEeecCC--ceEEEEec-------CCCCCceEEEEEEc
Confidence            358999999999999999999999999876532      1233443332  33444432       12347899999997


Q ss_pred             chhhhHHHHHHHHHHhCCeeecCCcccC--CCCceEEEEECCCCCeEEEEe
Q 022871          232 DVYKSAEVVNLVTQELGGKITRQPGSIP--GLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       232 di~~~~~~l~~~~~~~G~~~~~~p~~~~--~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +.+ .++++.++|+++|+++...|....  .+..+.+||+||+||+|||+-
T Consensus        68 ~~~-dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~  117 (131)
T d1lgta1          68 DAA-GLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYY  117 (131)
T ss_dssp             SHH-HHHHHHHHHHHTTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEE
T ss_pred             cHH-HHHHHHHHHHHcCCceEECCccccccCCceEEEEEECCCCCEEEEEe
Confidence            632 223333444999999988875532  123478999999999999975

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.66  E-value=1.5e-15  Score=116.08  Aligned_cols=121  Identities=19%  Similarity=0.211  Sum_probs=87.2

Q ss_pred             CceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEE
Q 022871           20 DKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIA   99 (291)
Q Consensus        20 ~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~   99 (291)
                      .+.||+||+|.|+|++++++|| +.|||++..+.....+....+++..+.....+  .+...       .+++++|++|.
T Consensus         2 ~i~rl~Hv~l~v~Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l--~~~~~-------~~~~~~H~~f~   71 (176)
T d1f1ua2           2 ELVRLDHFNQVTPDVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDT--ALTGG-------NGPRMHHVAFA   71 (176)
T ss_dssp             CCCEEEEEEEEESCHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSE--EEEES-------SBSEEEEEEEE
T ss_pred             ceeEeeeEEEEcCCHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccce--ecccc-------cCCCccceeEE
Confidence            4789999999999999999999 67999998876665555555666543322222  22211       23488999999


Q ss_pred             eCCH---HHHHHHHHHcCCeE--ecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Q 022871          100 TEDV---YKLVENIRAKGGNV--TREPGPLKGGTTHIAFVKDPDGYIFELIQRGPT  150 (291)
Q Consensus       100 v~d~---~~~~~~l~~~G~~~--~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~  150 (291)
                      +.++   .+..++|.++|+..  ...|.....+...++||+|||||+||+......
T Consensus        72 ~~~~~~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~  127 (176)
T d1f1ua2          72 THEKHNIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYY  127 (176)
T ss_dssp             CSSHHHHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCC
T ss_pred             eccchhHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcc
Confidence            9754   45667999999853  334445444555679999999999999887643

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.66  E-value=7.4e-16  Score=115.49  Aligned_cols=121  Identities=12%  Similarity=0.089  Sum_probs=84.7

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC---CcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEE
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP---EYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVA  227 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~  227 (291)
                      +..+.|++|.|+|++++.+||+++|||++.......   .......++.....  .+.+....      .+..++++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~a~~~------~~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGR--HHTIALAA------FPIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSB--SCSEEEEC------CSCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccc--cceeeecc------CCCCCceeEEE
Confidence            356999999999999999999999999987654321   22233444443332  23333321      12335899999


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCC-eEEEEec
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGW-KTVLVDN  281 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~-~iel~~~  281 (291)
                      |.|++++++.+. .++|+++|+.+ ..|.++..+...++|++||+|+ .+|+.-.
T Consensus        80 f~v~~~ddv~~~-~d~l~~~G~~~-~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~  132 (156)
T d1kw3b2          80 LQANTIDDVGYA-FDRLDAAGRIT-SLLGRHTNDQTLSFYADTPSPMIEVEFGWG  132 (156)
T ss_dssp             EEBSSHHHHHHH-HHHHHHTTCBC-BCSEEESSSCCEEEEEECSSTTCEEEEEEC
T ss_pred             EECCCHHHHHHH-HHHHHhcCCce-ecCcccCCCCeEEEEEECCCCCeEEEEecC
Confidence            999886665444 46669999865 6777776555688999999998 5899654

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.66  E-value=1.9e-16  Score=119.81  Aligned_cols=128  Identities=16%  Similarity=0.222  Sum_probs=95.1

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCc--ceeEEEecccCCCceeEEEeeeecCcce----------ec
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY--KYTLAMLGYAEEDQTTVLELTYNYGVTE----------YT  218 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~l~~~~~~~~----------~~  218 (291)
                      ..+++||.|.|+|++++.+||+++|||+++........  ....+.++.+    ...+++........          ..
T Consensus         5 i~~idHv~i~V~D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~----~~~i~l~~~~~~~~~~~~~~~~~~~~   80 (163)
T d1t47a1           5 VKGMDAVVFAVGNAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNG----SARFVLTSVIKPATPWGHFLADHVAE   80 (163)
T ss_dssp             CCEEEEEEEECSCHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEET----TEEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred             CceEeEEEEEeCCHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecC----CEEEEEeccCCCCCccccccchhhhc
Confidence            35689999999999999999999999998765443322  2233434422    45566655433221          12


Q ss_pred             cCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCC--ceEEEEECCCCCeEEEEechhhhh
Q 022871          219 KGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLN--TKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       219 ~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~--~~~~~~~Dp~G~~iel~~~~~~~~  286 (291)
                      .+.++.|++|.|+|+++++++|    +++|++++.+|......+  .+++++++|+|..++|+|+..+.+
T Consensus        81 ~g~G~~hiaf~VdDid~a~~~l----~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~~~~g  146 (163)
T d1t47a1          81 HGDGVVDLAIEVPDARAAHAYA----IEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRTGYDG  146 (163)
T ss_dssp             HCSEEEEEEEECSCHHHHHHHH----HHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEEEECS
T ss_pred             CCCceEEEEEeeCCHHHHHHHH----HHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEeccCCCC
Confidence            4579999999999999999999    999999999987643222  367899999999999999876544

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.65  E-value=5.1e-16  Score=113.14  Aligned_cols=115  Identities=16%  Similarity=0.114  Sum_probs=79.8

Q ss_pred             CCCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          151 PEPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       151 ~~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      ..+|.||+|.|+|++++.+||+++|||++..+..      ...+++.+..  +..+.+..       ...++..|++|.|
T Consensus         2 i~~L~hv~i~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~l~~~~~--~~~l~~~~-------~~~~~~~h~~f~v   66 (132)
T d1kw3b1           2 IERLGYLGFAVKDVPAWDHFLTKSVGLMAAGSAG------DAALYRADQR--AWRIAVQP-------GELDDLAYAGLEV   66 (132)
T ss_dssp             CCEEEEEEEEESCHHHHHHHHHHTTCCEEEEEET------TEEEEESSSB--SCSEEEEE-------CTTCEEEEEEEEC
T ss_pred             cccccEEEEEeCCHHHHHHHHHHHhCCceecccc------ceeeeeeeec--ceeeeeec-------cCCCCceEEEEEe
Confidence            3579999999999999999999999999876532      1233443332  23343332       1234789999999


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCC--CCceEEEEECCCCCeEEEEec
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPG--LNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~--~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      .+.++ ++++.++++++|+++...+.....  +..+.+||+||+||+|||+-.
T Consensus        67 ~~~~d-l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~  118 (132)
T d1kw3b1          67 DDAAA-LERMADKLRQAGVAFTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYG  118 (132)
T ss_dssp             SSHHH-HHHHHHHHHHHTCCCEECCHHHHHHHTCSEEEEEECTTSCEEEEEEC
T ss_pred             ccHHH-HHHHHHHHHHcCCCceecCccccccCCcceEEEEECCCCCEEEEEEC
Confidence            76332 233334449999999887765321  124789999999999999854

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.65  E-value=7.2e-16  Score=111.76  Aligned_cols=118  Identities=19%  Similarity=0.194  Sum_probs=81.6

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeec---c-CCCCcccCCCCeeEEEE
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTY---N-YGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~g~~~i~~   98 (291)
                      +|+|++|.|+|++++++||++ |||.+........    .+.+..+. ...+.+....   . ........+.+..|++|
T Consensus         2 ri~hv~l~V~D~~~s~~FY~~-Lg~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   75 (128)
T d1klla_           2 RISLFAVVVEDMAKSMEFYRK-MGVEIPAEADSAP----HTEAVLDG-GIRLAWDTVETVRSYDPEWQAPTGGHRFAIAF   75 (128)
T ss_dssp             CCCEEEEEESCHHHHHHHHHH-TTCCCCTTGGGCS----EEEEECGG-GCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEE
T ss_pred             eEeEEEEEcCCHHHHHHHHHH-hCCcccccccccc----ceeeeccc-eeeeeecccccccccCCCCCCCccccceeEee
Confidence            789999999999999999977 8998755433221    23333222 2222222111   0 11111112235578999


Q ss_pred             EeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeC
Q 022871           99 ATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus        99 ~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      .|.+   +++++++|+++|+++..+|...++|.+ .+||+|||||+|||.+.
T Consensus        76 ~v~~~~~l~~~~~~l~~~G~~~~~~p~~~~~G~~-~~~~~DPdG~~iel~~p  126 (128)
T d1klla_          76 EFPDTASVDKKYAELVDAGYEGHLKPWNAVWGQR-YAIVKDPDGNVVDLFAP  126 (128)
T ss_dssp             ECSSHHHHHHHHHHHHHTTCEEEEEEEECTTSEE-EEEEECTTSCEEEEEEE
T ss_pred             eeccchhhHHHHHHHHhccCccccCCeEcCCCcE-EEEEECCCCCEEEEEec
Confidence            9976   677899999999999998888887765 48999999999999875

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.63  E-value=1.6e-15  Score=110.73  Aligned_cols=109  Identities=26%  Similarity=0.291  Sum_probs=74.0

Q ss_pred             CceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe--
Q 022871          153 PLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST--  230 (291)
Q Consensus       153 ~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v--  230 (291)
                      .++||+|.|+|++++.+||+++||+++......    ...+...      ...+.........  ....+..|++|.+  
T Consensus         4 ~i~Hv~l~v~d~~~~~~FY~~~lG~~~~~~~~~----~~~~~~~------~~~~~~~~~~~~~--~~~~~~~h~~~~~~~   71 (134)
T d1nkia_           4 GLNHLTLAVADLPASIAFYRDLLGFRLEARWDQ----GAYLELG------SLWLCLSREPQYG--GPAADYTHYAFGIAA   71 (134)
T ss_dssp             EEEEEEEEESCHHHHHHHHHHTTCCEEEEEETT----EEEEEET------TEEEEEEECTTCC--CCCSSSCEEEEEECH
T ss_pred             cEeEEEEEeCCHHHHHHHHHHhhCCeEEEeccc----eeeeecC------CeEEEEeeecccc--ccccccccchhcccc
Confidence            589999999999999999999999998765321    2222222      2233332222211  1223445555555  


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +|++++.++|    +++|+++...+.   + +++.+||+|||||+|||...
T Consensus        72 ~dl~~~~~~l----~~~G~~~~~~~~---~-~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          72 ADFARFAAQL----RAHGVREWKQNR---S-EGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             HHHHHHHHHH----HHTTCCEEECCC---S-SSCEEEEECTTCCEEEEESC
T ss_pred             chHHHHHHHH----HHCCCcCccCCC---c-ceeEEEEECCCCCEEEEEEC
Confidence            6777777777    999999865532   2 35789999999999999874

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.63  E-value=2e-15  Score=111.16  Aligned_cols=114  Identities=22%  Similarity=0.286  Sum_probs=78.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe-
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST-  230 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v-  230 (291)
                      ..+.||+|.|+|++++.+||+++|||++......    ...+...  .  ....+.+...... ......+..|++|.+ 
T Consensus         3 ~~l~Hi~l~v~d~~~~~~FY~~vLG~~~~~~~~~----~~~~~~~--~--~~~~l~~~~~~~~-~~~~~~~~~h~~~~~~   73 (140)
T d1npba_           3 QSLNHLTLAVSDLQKSVTFWHELLGLTLHARWNT----GAYLTCG--D--LWVCLSYDEARQY-VPPQESDYTHYAFTVA   73 (140)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHTTSCCEEEEEETT----EEEEEET--T--EEEEEEECTTCCC-CCGGGSCSCEEEEECC
T ss_pred             CcEeEEEEEeCCHHHHHHHHHHHhCCEEEEEecc----ccccccc--c--ccceeeccccccc-CCCcCCccceeeeech
Confidence            4589999999999999999999999998654321    2222222  1  1233333221111 122344677888887 


Q ss_pred             -cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          231 -DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       231 -~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                       +|++++.+++    ++.|+++...+.    .+++.+||+|||||.|||.+..
T Consensus        74 ~~d~~~~~~~l----~~~Gv~~~~~~~----~~~~~~~~~DPdGn~iEi~~~~  118 (140)
T d1npba_          74 EEDFEPLSQRL----EQAGVTIWKQNK----SEGASFYFLDPDGHKLELHVGS  118 (140)
T ss_dssp             HHHHHHHHHHH----HHTTCCEEECCC----SSSEEEEEECTTCCEEEEEECC
T ss_pred             HHHHHHHHHHH----HHCCCeEeecCC----CCceEEEEECCCCCEEEEEECC
Confidence             5677777777    999999876553    2358999999999999997754

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=1.4e-15  Score=115.42  Aligned_cols=129  Identities=15%  Similarity=0.104  Sum_probs=90.0

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcc----------------
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVT----------------  215 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~----------------  215 (291)
                      .+++||+|.|+|++++.+||+++|||++.....................  ...+.+.......                
T Consensus        11 ~~~dHv~i~V~Dle~a~~fY~~~LGf~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~   88 (167)
T d1sqda1          11 KRFHHIEFWCGDATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSG--DLRFLFTAPYSPSLSAGEIKPTTTASIPS   88 (167)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEET--TEEEEEEEECCGGGTTTCCGGGCCCSSTT
T ss_pred             ceEeEEEEEeCCHHHHHHHHHHHhCCeEEEEeeccCCCeeEEEEEeeCC--CeeEEEecccccccccccccccccccccc
Confidence            4689999999999999999999999998766543322211111111111  1222221111000                


Q ss_pred             -e--------eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhh
Q 022871          216 -E--------YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLK  286 (291)
Q Consensus       216 -~--------~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~  286 (291)
                       +        ...++|+.|+||.|+|+++++++|    +++|++++.+|....+ +.+++++..+.+..++|+++++...
T Consensus        89 ~~~~~~~~~~~~~~~G~~Hiaf~VdDi~aa~~~l----~~~G~~~~~~P~~~~~-~~~~a~I~~~gd~~~~~v~r~~~~~  163 (167)
T d1sqda1          89 FDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSIS----VANGAIPSSPPIVLNE-AVTIAEVKLYGDVVLRYVSYKAEDT  163 (167)
T ss_dssp             CCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHH----HHTTCCEEEEEEEETT-TEEEEEEEEETTEEEEEEEECCC--
T ss_pred             CCcchHHHhhhccCCCceEEEEEeCCHHHHHHHH----HHCCCEEecCCeecCC-CEEEEEEEccCCcEEEEEecCCCcc
Confidence             0        013568999999999999999999    9999999999988766 4688999999999999999987554


Q ss_pred             h
Q 022871          287 E  287 (291)
Q Consensus       287 ~  287 (291)
                      +
T Consensus       164 ~  164 (167)
T d1sqda1         164 E  164 (167)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.61  E-value=1.1e-15  Score=116.50  Aligned_cols=129  Identities=16%  Similarity=0.062  Sum_probs=92.5

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCc--c------------e-
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGV--T------------E-  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~------------~-  216 (291)
                      .+++||.|.|+|++++++||+++|||++.....................  ...+.+......  .            . 
T Consensus        12 ~~~~Hi~i~V~D~e~a~~FY~~~LGf~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (172)
T d1sp8a1          12 LAFHHVELWCADAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSG--SLSFLFTAPYAHGADAATAALPSFSAAAA   89 (172)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEET--TEEEEEEEECCSSCCGGGCSSTTCCHHHH
T ss_pred             CEEEEEEEEeCCHHHHHHHHHHhhCceEEEEecccccceeEEEEEeccC--CeeeEEeeccCCCchhhhcccccCCcchh
Confidence            4689999999999999999999999998765543332222221111111  222222211100  0            0 


Q ss_pred             ----eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhhhhh
Q 022871          217 ----YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDFLKE  287 (291)
Q Consensus       217 ----~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~~~~  287 (291)
                          ...+.|+.|+||+|+|++++++++    +++|+++..+|....+ +.++++++.+.+..++|+++.+..+.
T Consensus        90 ~~~~~~~g~Gi~Hiaf~VdDi~aa~~~l----~~~Ga~~~~~P~~~~~-g~~~a~v~~~g~~~~~lve~~~~~~~  159 (172)
T d1sp8a1          90 RRFAADHGLAVRAVALRVADAEDAFRAS----VAAGARPAFGPVDLGR-GFRLAEVELYGDVVLRYVSYPDGAAG  159 (172)
T ss_dssp             HHHHHHHSSEEEEEEEEESCHHHHHHHH----HTTTCCEEEEEEEEET-TEEEEEEEEETTEEEEEEECCTTGGG
T ss_pred             hhhhhhcCCceEEEEEeeCcHHHHHHHH----HHCcCEeccCCccCCC-CEEEEEEECCCCcEEEEEecCCCCCC
Confidence                114569999999999999999999    9999999999987666 45889999998999999999887654

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.59  E-value=1.6e-14  Score=108.13  Aligned_cols=119  Identities=22%  Similarity=0.258  Sum_probs=80.7

Q ss_pred             ceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeec---CCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEE
Q 022871           21 KRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV---PEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        21 ~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~   97 (291)
                      ..+|+|++|.|+|++++.+||+++|||++..+...   ........++..+.....  +.....      ....+++|++
T Consensus         8 ~~GlgHv~l~v~D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~a~~~~------~~~~gl~Hia   79 (156)
T d1kw3b2           8 DQGIGHFVRCVPDTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHT--IALAAF------PIPKRIHHFM   79 (156)
T ss_dssp             GGCSCEEEEECSCHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCS--EEEECC------SCSSSEEEEE
T ss_pred             CCCcceEEEecCCHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccce--eeeccC------CCCCceeEEE
Confidence            46899999999999999999999999998765321   112233344444322221  212111      1224799999


Q ss_pred             EEeCC---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCC-EEEEEeCC
Q 022871           98 IATED---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGY-IFELIQRG  148 (291)
Q Consensus        98 ~~v~d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~-~iel~~~~  148 (291)
                      |+|++   +.+++++|+++|+.+. .+.....+...++|++||+|+ .+|+....
T Consensus        80 f~v~~~ddv~~~~d~l~~~G~~~~-g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          80 LQANTIDDVGYAFDRLDAAGRITS-LLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             EEBSSHHHHHHHHHHHHHTTCBCB-CSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             EECCCHHHHHHHHHHHHhcCCcee-cCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            99975   5557899999998654 444444344456999999998 58987754

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.58  E-value=1.3e-14  Score=103.68  Aligned_cols=106  Identities=23%  Similarity=0.322  Sum_probs=74.7

Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhH
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~  237 (291)
                      .|.|+|+++|.+||++ |||++.+...    .+..+...      ...+.+.......   ......++++.++|++++.
T Consensus         7 ~l~v~Dl~~s~~FY~~-LGf~~~~~~~----~~~~~~~~------~~~~~~~~~~~~~---~~~~~~~~~~~~~d~~~~~   72 (120)
T d1ecsa_           7 NLPSRDFDSTAAFYER-LGFGIVFRDA----GWMILQRG------DLMLEFFAHPGLD---PLASWFSCCLRLDDLAEFY   72 (120)
T ss_dssp             EEEESCHHHHHHHHHT-TTCEEEEECS----SEEEEEET------TEEEEEEECTTCC---GGGCCCEEEEEESCHHHHH
T ss_pred             EEEeCCHHHHHHHHHH-cCCeeEEecC----ceeeeecc------eeccccccccccc---cCCCCcEEEEEECCHHHHH
Confidence            4999999999999988 9999876432    12222222      2233333322221   1234568999999999999


Q ss_pred             HHHHHHHHHhCCeeec-------CCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          238 EVVNLVTQELGGKITR-------QPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~-------~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      +.+    ++.|+++..       +|...++ |.+.+||+|||||+|||.|.+
T Consensus        73 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-G~r~~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          73 RQC----KSVGIQETSSGYPRIHAPELQGW-GGTMAALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHH----HHTTCCBCSSSSSEEEEEEECTT-SSEEEEEECTTSCEEEEEECC
T ss_pred             HHH----hhhhhhhccccccccccceecCC-CcEEEEEECCCCCEEEEEEcc
Confidence            999    888877644       4566666 468999999999999999874

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.55  E-value=6.5e-15  Score=109.05  Aligned_cols=127  Identities=10%  Similarity=0.041  Sum_probs=93.3

Q ss_pred             CCCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcc--cCCCCee
Q 022871           17 PKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSY--DIGTGFG   94 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~   94 (291)
                      +++.+.+|+||.+.|+|++++.+||++ |||+...+....    ....++.  +...+++..........+  ..|+|++
T Consensus         3 np~g~~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~----~~~l~~~--G~i~ll~~~~~~s~~~~~~~~hg~gv~   75 (150)
T d1cjxa1           3 NPMGLMGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSK----NVHLYRQ--GEINLILNNEPNSIASYFAAEHGPSVC   75 (150)
T ss_dssp             CTTCEEEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSS----SEEEEEE--TTEEEEEECCSSSHHHHHHHHHSSEEE
T ss_pred             CCCccCCEEEEEEecCCHHHHHHHHHH-hCCEEEecccce----EEEEEec--CcEEEEecCCCCCHhHhHHhhCCCceE
Confidence            346799999999999999999999987 999998875432    2333443  344555443322222222  2678999


Q ss_pred             EEEEEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCC
Q 022871           95 HFAIATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPE  152 (291)
Q Consensus        95 ~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~  152 (291)
                      ||||.|+|++++++++.++|++....+..  .|...+..+++|+|.++.|+++.....
T Consensus        76 hiaf~V~D~~~a~~~a~~~Ga~~i~~~~~--~g~~~~~~i~g~gg~~i~Fv~~~~~~~  131 (150)
T d1cjxa1          76 GMAFRVKDSQKAYNRALELGAQPIHIDTG--PMELNLPAIKGIGGAPLYLIDRFGEGS  131 (150)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCBCCCCCC--TTCBCCCEEECGGGCEEEEECCCSSSC
T ss_pred             EEEEEeCCHHHHHHHHHHCCCEEcccCCC--CCceeeeEEEcCCCCEEEEECcCCCCC
Confidence            99999999999999999999997766433  233335778999999999999765433

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.51  E-value=8.3e-14  Score=101.58  Aligned_cols=118  Identities=16%  Similarity=0.130  Sum_probs=78.9

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-------CceeeEEEecCCCCceeEEEe-eccCCCCcccCCCCeeEEE
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-------EKYSNAFLGFGPEQSHFVVEL-TYNYGVTSYDIGTGFGHFA   97 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~i~   97 (291)
                      ++.+.+.|.++|++||+++||++++.+...++       +....+.+.+++..  +.+.. ................+++
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~   87 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSS--FVVCDVSSLPGFSTAKSEGSGVTFL   87 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEE--EEEEEGGGSTTCCCCCTTSCCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCee--eeccccccccccccCCCCCcceEEE
Confidence            45666779999999999999999876643222       12233445554321  22211 1111111222222335899


Q ss_pred             EEeCCHHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           98 IATEDVYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        98 ~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      +.|+|++++++++.++|+.+..++...++|.+. ++|+||+|+.|+|.|
T Consensus        88 ~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~-~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          88 LGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFK-GKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EECSCHHHHHHHHHHTTCEECCCCHHHHHTTEE-EEEECTTSCEEEEEC
T ss_pred             EeecCcceeEEEeecccceEecCcccccccCEE-EEEECCCCCEEEEeC
Confidence            999999999999999999999999998888764 899999999999875

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.51  E-value=1.6e-13  Score=97.83  Aligned_cols=105  Identities=21%  Similarity=0.245  Sum_probs=73.7

Q ss_pred             EEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHHHHH
Q 022871           29 YRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLVE  108 (291)
Q Consensus        29 l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~~  108 (291)
                      |.|+|++++.+||++ |||++......      ..++..+..  .+.+.......  +   .....++++.++|++++++
T Consensus         8 l~v~Dl~~s~~FY~~-LGf~~~~~~~~------~~~~~~~~~--~~~~~~~~~~~--~---~~~~~~~~~~~~d~~~~~~   73 (120)
T d1ecsa_           8 LPSRDFDSTAAFYER-LGFGIVFRDAG------WMILQRGDL--MLEFFAHPGLD--P---LASWFSCCLRLDDLAEFYR   73 (120)
T ss_dssp             EEESCHHHHHHHHHT-TTCEEEEECSS------EEEEEETTE--EEEEEECTTCC--G---GGCCCEEEEEESCHHHHHH
T ss_pred             EEeCCHHHHHHHHHH-cCCeeEEecCc------eeeeeccee--ccccccccccc--c---CCCCcEEEEEECCHHHHHH
Confidence            999999999999998 99999765331      233333322  22222221111  1   1133578999999999999


Q ss_pred             HHHHcCCeEec-------CCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871          109 NIRAKGGNVTR-------EPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus       109 ~l~~~G~~~~~-------~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +++++|+.+..       ++...++|.+. ++|+|||||+|+|+|..
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~G~r~-~~~~DPDGn~iei~q~d  119 (120)
T d1ecsa_          74 QCKSVGIQETSSGYPRIHAPELQGWGGTM-AALVDPDGTLLRLIQNE  119 (120)
T ss_dssp             HHHHTTCCBCSSSSSEEEEEEECTTSSEE-EEEECTTSCEEEEEECC
T ss_pred             HHhhhhhhhccccccccccceecCCCcEE-EEEECCCCCEEEEEEcc
Confidence            99999988644       34566677665 89999999999999864

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.49  E-value=1.2e-13  Score=98.82  Aligned_cols=105  Identities=12%  Similarity=0.035  Sum_probs=73.3

Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhhhH
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYKSA  237 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~~~  237 (291)
                      .|.|+|++++.+||+++|||++.....    .+..+...      ...+.+......    ......++.+.+.|++++.
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~----~~~~~~~~------~~~l~l~~~~~~----~~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR----DFAGVRRG------DIRLHISRTEHQ----IVADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS----SEEEEEET------TEEEEEEECSCH----HHHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC----ceeEeeee------eeeeeeeccccc----cccceeEEEEeechhHHHH
Confidence            489999999999999999999765421    23333322      244555443222    1234568999999999999


Q ss_pred             HHHHHHHHHhCCeeecCCcc-------cCCCCceEEEEECCCCCeEEEEec
Q 022871          238 EVVNLVTQELGGKITRQPGS-------IPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       238 ~~l~~~~~~~G~~~~~~p~~-------~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +.+    ++.+......+..       .++ +++.+|++|||||+|||...
T Consensus        76 ~~~----~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEW----ARAVSTDYADTSGPAMTPVGESP-AGREFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHH----HTTSCSCTTCTTSCEECCCEEET-TEEEEEEECTTCCEEEEEEC
T ss_pred             HHH----HhhcceEEeeccccccCccccCC-CeEEEEEECCCCCEEEEEeC
Confidence            999    8887765444322       223 35899999999999999864

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.48  E-value=6e-14  Score=102.36  Aligned_cols=116  Identities=14%  Similarity=0.149  Sum_probs=76.9

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCc-------ceeEEEecccCCCceeEEEeeeec---CcceeccCcceeE
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEY-------KYTLAMLGYAEEDQTTVLELTYNY---GVTEYTKGNAYAQ  225 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~l~~~~---~~~~~~~~~~~~h  225 (291)
                      .+.+.+.|++++.+||+++||+++..+...++.       ......+..+    ...+.+....   +.......++..+
T Consensus        10 ~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (135)
T d1xy7a_          10 MLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLA----GSSFVVCDVSSLPGFSTAKSEGSGVT   85 (135)
T ss_dssp             EEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEET----TEEEEEEEGGGSTTCCCCCTTSCCCE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEEC----CeeeeccccccccccccCCCCCcceE
Confidence            455677899999999999999997765432221       1111222221    1222222211   1111122234468


Q ss_pred             EEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       226 ~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      +++.|+|+++++.++    +++|++++.+|...+++ .+.++++||+|+.|+|.|
T Consensus        86 l~~~v~d~~~~~~~~----~~~g~~~~~~~~~~~~g-~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          86 FLLGTKDAEAAVAKA----VDAGAVKVEVTEAEVEL-GFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             EEEECSCHHHHHHHH----HHTTCEECCCCHHHHHT-TEEEEEECTTSCEEEEEC
T ss_pred             EEEeecCcceeEEEe----ecccceEecCccccccc-CEEEEEECCCCCEEEEeC
Confidence            999999999999999    99999999999998884 689999999999999986

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.45  E-value=4.2e-13  Score=95.85  Aligned_cols=105  Identities=13%  Similarity=0.046  Sum_probs=71.9

Q ss_pred             EEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHHHH
Q 022871           28 VYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYKLV  107 (291)
Q Consensus        28 ~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~~~  107 (291)
                      .|.|+|++++.+||+++|||++..+.+      ..+++..++.  .+.+  .......    .....++.+.+.|+++++
T Consensus        10 vL~v~Dl~~s~~FY~~vLG~~~~~~~~------~~~~~~~~~~--~l~l--~~~~~~~----~~~~~~~~~~~~~i~~~~   75 (122)
T d1jifa_          10 VLTAVDVPANVSFWVDTLGFEKDFGDR------DFAGVRRGDI--RLHI--SRTEHQI----VADNTSAWIEVTDPDALH   75 (122)
T ss_dssp             EEEESSHHHHHHHHHHTTCCEEEEECS------SEEEEEETTE--EEEE--EECSCHH----HHTTCEEEEEESCHHHHH
T ss_pred             EEEcCCHHHHHHHHHhhhCCceEecCC------ceeEeeeeee--eeee--ecccccc----ccceeEEEEeechhHHHH
Confidence            599999999999999999999877643      1345554432  2222  2211111    113457899999999999


Q ss_pred             HHHHHcCCeEecCCc-------ccCCCceEEEEEECCCCCEEEEEeC
Q 022871          108 ENIRAKGGNVTREPG-------PLKGGTTHIAFVKDPDGYIFELIQR  147 (291)
Q Consensus       108 ~~l~~~G~~~~~~~~-------~~~~g~~~~~~~~dp~G~~iel~~~  147 (291)
                      +++.+++......+.       ...++.+ .+|++|||||+|+|...
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~DPdGn~ief~~~  121 (122)
T d1jifa_          76 EEWARAVSTDYADTSGPAMTPVGESPAGR-EFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTSCSCTTCTTSCEECCCEEETTEE-EEEEECTTCCEEEEEEC
T ss_pred             HHHHhhcceEEeeccccccCccccCCCeE-EEEEECCCCCEEEEEeC
Confidence            999999877543321       1223343 58999999999999864

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.45  E-value=4.6e-13  Score=95.23  Aligned_cols=109  Identities=14%  Similarity=0.112  Sum_probs=71.6

Q ss_pred             eEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecchhh
Q 022871          156 QVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDVYK  235 (291)
Q Consensus       156 hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di~~  235 (291)
                      +-.|.|+|++++++||+++|||++.....    .+..+...      ...+.+......    ...+..++.+.+++++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~----~~~~~~~~------~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVED----DFAGVVRD------DVTLFISAVQDQ----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECS----SEEEEEET------TEEEEEEECSCT----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECC----CeeEEecc------cceeeccccccc----cCCCCceEEEeeccHHH
Confidence            34589999999999999999999876532    13333322      233444332221    22355678899999888


Q ss_pred             hHHHHHHH----HHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEe
Q 022871          236 SAEVVNLV----TQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVD  280 (291)
Q Consensus       236 ~~~~l~~~----~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~  280 (291)
                      ....+.+.    +.+.|.....+|...++  ++.+||+|||||+|||.+
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPW--GREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETT--EEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCC--EEEEEEECCCCCEEEEEE
Confidence            87777211    12334444455666665  489999999999999986

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.35  E-value=3.2e-12  Score=98.94  Aligned_cols=102  Identities=18%  Similarity=0.192  Sum_probs=70.9

Q ss_pred             CceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCCCceeeEE--EecCCCCceeEEEeeccCCC---Ccc---cC
Q 022871           20 DKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVPEEKYSNAF--LGFGPEQSHFVVELTYNYGV---TSY---DI   89 (291)
Q Consensus        20 ~~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~---~~   89 (291)
                      .+++|+||++.|+  |+++++.||+++|||+.....+.++....+..  +...+....+.+........   ..+   ..
T Consensus         2 Gl~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           2 GLKVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             SEEEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CCCeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEeeccccccceecccCCCCCccHHHHHHHhcC
Confidence            3789999999998  99999999999999999887665444322222  22222222222221211111   111   26


Q ss_pred             CCCeeEEEEEeCCHHHHHHHHHHcCCeEecCC
Q 022871           90 GTGFGHFAIATEDVYKLVENIRAKGGNVTREP  121 (291)
Q Consensus        90 ~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~  121 (291)
                      |.|++||||.|+|+.+++++|+++|++++..|
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~fL~~p  113 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRFMTAP  113 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCBCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCccccCc
Confidence            78999999999999999999999999987643

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.31  E-value=9.7e-12  Score=91.64  Aligned_cols=118  Identities=14%  Similarity=0.083  Sum_probs=84.4

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCCcceeEEEecccCCCceeEEEeeeecCcce----eccCcceeEEE
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPEYKYTLAMLGYAEEDQTTVLELTYNYGVTE----YTKGNAYAQVA  227 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~----~~~~~~~~h~~  227 (291)
                      ..++||.+.|+|++++.+||++ |||+...+.....    ...++.  +  ...+.+..+.....    ...|+++.|++
T Consensus         8 ~Gidhv~fav~d~~~~~~~~~~-lGF~~~~~~~~~~----~~l~~~--G--~i~ll~~~~~~s~~~~~~~~hg~gv~hia   78 (150)
T d1cjxa1           8 MGFEFIEFASPTPGTLEPIFEI-MGFTKVATHRSKN----VHLYRQ--G--EINLILNNEPNSIASYFAAEHGPSVCGMA   78 (150)
T ss_dssp             EEEEEEEEECSSTTSSHHHHHH-TTCEEEEEESSSS----EEEEEE--T--TEEEEEECCSSSHHHHHHHHHSSEEEEEE
T ss_pred             CCEEEEEEecCCHHHHHHHHHH-hCCEEEecccceE----EEEEec--C--cEEEEecCCCCCHhHhHHhhCCCceEEEE
Confidence            4689999999999999999987 9999876543321    222231  1  23333322211111    23678999999


Q ss_pred             EEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEechhh
Q 022871          228 ISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNEDF  284 (291)
Q Consensus       228 ~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~~~  284 (291)
                      |.|+|++++++++    +++|++.+..|... + ...+..++.++|.++.|+++.+.
T Consensus        79 f~V~D~~~a~~~a----~~~Ga~~i~~~~~~-g-~~~~~~i~g~gg~~i~Fv~~~~~  129 (150)
T d1cjxa1          79 FRVKDSQKAYNRA----LELGAQPIHIDTGP-M-ELNLPAIKGIGGAPLYLIDRFGE  129 (150)
T ss_dssp             EEESCHHHHHHHH----HHTTCCBCCCCCCT-T-CBCCCEEECGGGCEEEEECCCSS
T ss_pred             EEeCCHHHHHHHH----HHCCCEEcccCCCC-C-ceeeeEEEcCCCCEEEEECcCCC
Confidence            9999999999999    99999987776542 2 23578899999999999997653

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.30  E-value=1.9e-11  Score=86.56  Aligned_cols=105  Identities=12%  Similarity=0.090  Sum_probs=70.7

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeeecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeCCHHH
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATEDVYK  105 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d~~~  105 (291)
                      +..|.|+|++++++||+++|||++..+.+.      ...+..+..  .+.+.....  .    ...+..++.+.+.+++.
T Consensus         7 ~pvL~v~D~~~s~~FY~~~LG~~~~~~~~~------~~~~~~~~~--~l~~~~~~~--~----~~~~~~~~~~~~~~~~~   72 (120)
T d1xrka_           7 VPVLTARDVAEAVEFWTDRLGFSRVFVEDD------FAGVVRDDV--TLFISAVQD--Q----VVPDNTQAWVWVRGLDE   72 (120)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEECSS------EEEEEETTE--EEEEEECSC--T----TTGGGCEEEEEEECHHH
T ss_pred             EEEEEECCHHHHHHHHHHhhCCeEEEECCC------eeEEecccc--eeecccccc--c----cCCCCceEEEeeccHHH
Confidence            456999999999999999999999876432      344444432  222322211  1    11244577889999998


Q ss_pred             HHHHHHHcCCe--------EecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871          106 LVENIRAKGGN--------VTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus       106 ~~~~l~~~G~~--------~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .++++.+++..        ...++.+.++| + .+||+|||||.|||..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~-~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          73 LYAEWSEVVSTNFRDASGPAMTEIVEQPWG-R-EFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHHTTTSBSCTTTCSSCEECCCEEETTE-E-EEEEECTTCCEEEEEE
T ss_pred             HHHHHHHhhhHHhhhcccccccCceecCCE-E-EEEEECCCCCEEEEEE
Confidence            88877665544        33445555554 3 4899999999999975

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=2.1e-11  Score=94.32  Aligned_cols=106  Identities=17%  Similarity=0.249  Sum_probs=72.0

Q ss_pred             CCCCceeeeEEEEEeCC--HHHHHHHHHHhcCCEEEEeeecCC-----CceeeEEEecCCCCceeEEEeeccCCC----C
Q 022871           17 PKKDKRRFLHAVYRVGD--LDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVVELTYNYGV----T   85 (291)
Q Consensus        17 ~~~~~~~i~hv~l~v~d--~~~a~~fy~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   85 (291)
                      ++..+.+|+||++.|++  ++++++||+++|||+.....+..+     +......+..++....+.+....+...    .
T Consensus        18 p~~gl~~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~~~i~~~lne~~~~~~~sqi~   97 (210)
T d1sqia2          18 PSCNLEIIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYEESIKMPINEPAPGRKKSQIQ   97 (210)
T ss_dssp             CCCCEEEEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTTSCCEEEEEECC-----CHHH
T ss_pred             CCCCcceeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecCccccccccccCCCCcccHHH
Confidence            34479999999999998  999999999999999765432111     222233333333444444433222111    1


Q ss_pred             cc---cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCc
Q 022871           86 SY---DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPG  122 (291)
Q Consensus        86 ~~---~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~  122 (291)
                      .+   ..|.|++||||.|+|+.++.++|+++|+.+...|.
T Consensus        98 ~fl~~~~G~GiQHIAf~t~DI~~av~~L~~~Gv~fL~~P~  137 (210)
T d1sqia2          98 EYVDYNGGAGVQHIALRTEDIITTIRHLRERGMEFLAVPS  137 (210)
T ss_dssp             HHHHHHTSSEEEEEEEEESCHHHHHHHHHHHTCCBCCCCH
T ss_pred             HHHhhcCCCCeeEEEEEcCCHHHHHHHHHHcCCCCCCCCc
Confidence            11   35889999999999999999999999999887764

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.21  E-value=1.6e-10  Score=90.49  Aligned_cols=99  Identities=19%  Similarity=0.290  Sum_probs=66.6

Q ss_pred             CCCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----CceeeEEEecCCCCceeEE-EeeccCCCCc----c
Q 022871           18 KKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVV-ELTYNYGVTS----Y   87 (291)
Q Consensus        18 ~~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~   87 (291)
                      ...+++|+||++.|+|++++++||+++|||+...+....+     .......+..++....+.+ +...+.....    +
T Consensus         4 d~Gl~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~g~v~~~l~E~~~~~~~~s~i~~F   83 (224)
T d1sp8a2           4 DYGLSRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNSENVLLPLNEPVHGTKRRSQIQTF   83 (224)
T ss_dssp             CCSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSSSCCEEEEEEECCCSSSCCHHHHH
T ss_pred             CCCcCeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCCCccceeeeeecCCCCCccHHHHH
Confidence            3469999999999999999999999999999877653221     2233333333333332222 2211111111    1


Q ss_pred             ---cCCCCeeEEEEEeCCHHHHHHHHHHcCCe
Q 022871           88 ---DIGTGFGHFAIATEDVYKLVENIRAKGGN  116 (291)
Q Consensus        88 ---~~~~g~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                         ..+.|++||||.|+|+.+++++|+++|+.
T Consensus        84 L~~~~g~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          84 LDHHGGPGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             HHHHTSSEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             HHhccCCCceeEEEEeCCHHHHHHHHHhcccc
Confidence               25679999999999999999999988743

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.20  E-value=6.4e-11  Score=90.79  Aligned_cols=105  Identities=19%  Similarity=0.256  Sum_probs=71.5

Q ss_pred             CceeeeEEEEEeC--CHHHHHHHHHHhcCCEEEEeeecC-----CCceeeEEEecCCCCceeEEEeeccCCC----Ccc-
Q 022871           20 DKRRFLHAVYRVG--DLDRTIKFYTECFGMKLLRKRDVP-----EEKYSNAFLGFGPEQSHFVVELTYNYGV----TSY-   87 (291)
Q Consensus        20 ~~~~i~hv~l~v~--d~~~a~~fy~~~LG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-   87 (291)
                      .+.+|+||++.|+  +++.++.||+++|||+.......+     ........+..++....+.+........    ..+ 
T Consensus         3 ~f~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           3 TFQAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             SCCEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             cceeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeeccccccccceeecccCccccccchhhhh
Confidence            5789999999999  999999999999999987653221     1222222222222232233322211111    111 


Q ss_pred             --cCCCCeeEEEEEeCCHHHHHHHHHHcCCeEecCCccc
Q 022871           88 --DIGTGFGHFAIATEDVYKLVENIRAKGGNVTREPGPL  124 (291)
Q Consensus        88 --~~~~g~~~i~~~v~d~~~~~~~l~~~G~~~~~~~~~~  124 (291)
                        ..|+|++||||.|+|+.++.++|+++|+.++..|..-
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~Y  121 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSY  121 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGG
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHH
Confidence              3677999999999999999999999999988776543

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.19  E-value=2.6e-11  Score=93.72  Aligned_cols=99  Identities=18%  Similarity=0.203  Sum_probs=68.2

Q ss_pred             CCceeEEeeeC--CccccHHHHHhhhCCeeeeeeccCCccee--EEEecccCCCceeEEEeeeecCc-ce-------ecc
Q 022871          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKPEYKYT--LAMLGYAEEDQTTVLELTYNYGV-TE-------YTK  219 (291)
Q Consensus       152 ~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~l~~~~~~-~~-------~~~  219 (291)
                      ..++||++.|+  |++++..||+++|||++.......+....  ...+.  .......+.+..+... .+       ...
T Consensus         4 ~~IDHIa~~V~~~~l~~a~~FY~~vlGf~~~~~~di~~~~~~l~s~~~~--~~~~~~~~~l~~~~~~~~sqi~~fl~~~~   81 (203)
T d1cjxa2           4 KVIDHLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMS--APDGMIRIPLNEESSKGAGQIEEFLMQFN   81 (203)
T ss_dssp             EEEEEECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEE--CTTSSCEEEEEEECTTCCSHHHHHHHHHT
T ss_pred             CeeCeeEeccChhhHHHHHHHHHHHhCCEEeEEEecCCCcceEEEEEee--ccccccceecccCCCCCccHHHHHHHhcC
Confidence            35899999997  89999999999999998766543332222  22222  2222333333322211 11       235


Q ss_pred             CcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCc
Q 022871          220 GNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       220 ~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      |+|++||||.|+||.++++.|    +++|++++..|.
T Consensus        82 g~GiqHIAf~vdDI~aav~~L----~~~Gv~fL~~pp  114 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDAL----KKIGMRFMTAPP  114 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHH----HHTTCCBCCCCC
T ss_pred             CCCCceEEEEeCCHHHHHHHH----HhcCCccccCch
Confidence            679999999999999999999    999999987653

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.15  E-value=1.6e-10  Score=88.49  Aligned_cols=98  Identities=11%  Similarity=0.233  Sum_probs=67.4

Q ss_pred             CCceeEEeeeC--CccccHHHHHhhhCCeeeeeeccC-----CcceeEEEecccCCCceeEEEeeeec--Ccce------
Q 022871          152 EPLCQVMLRVG--DLGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNY--GVTE------  216 (291)
Q Consensus       152 ~~~~hv~l~v~--D~~~~~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~~------  216 (291)
                      ..++||++.|+  +++++..||+++|||+........     ........+.  ..+....+.+..+.  ....      
T Consensus         5 ~~IDHia~avp~~~l~~av~fY~~vfGf~~~~~~~~~di~~~~~~l~s~~~~--s~~~~v~l~lne~~~~~~~s~i~~FL   82 (199)
T d1t47a2           5 QAIDHCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVA--DGTLKVKFPINEPALAKKKSQIDEYL   82 (199)
T ss_dssp             CEEEEEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEE--CTTSCSEEEEEEECCSSSCCHHHHHH
T ss_pred             eeeCceEeccChhhHHHHHHHHHHHhCCeEeeEecccccccceeEEEEeecc--ccccccceeecccCccccccchhhhh
Confidence            35899999998  999999999999999976543211     1112222222  22223334333222  1111      


Q ss_pred             -eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCC
Q 022871          217 -YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 -~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                       ...|+|++||||.|+||.++++.|    +++|++++..|
T Consensus        83 ~~~~g~GiQHIAl~tdDI~~av~~L----~~~G~~fL~~p  118 (199)
T d1t47a2          83 EFYGGAGVQHIALNTGDIVETVRTM----RAAGVQFLDTP  118 (199)
T ss_dssp             HHHTSCEEEEEEEECSCHHHHHHHH----HHTTCCBCCCC
T ss_pred             hhcCCCcceEEEEEcCCHHHHHHHH----HHcCCCCCCCC
Confidence             235679999999999999999999    99999999888

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=2.5e-10  Score=88.21  Aligned_cols=98  Identities=15%  Similarity=0.234  Sum_probs=66.5

Q ss_pred             CceeEEeeeCC--ccccHHHHHhhhCCeeeeeeccC-----CcceeEEEecccCCCceeEEEeeeecCc--ce-------
Q 022871          153 PLCQVMLRVGD--LGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNYGV--TE-------  216 (291)
Q Consensus       153 ~~~hv~l~v~D--~~~~~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~~~--~~-------  216 (291)
                      .++||++.|++  ++++..||+++|||+........     ........+..+.  ....+.+..+.+.  ..       
T Consensus        24 ~IDHv~~~Vp~~~ld~av~fY~~vfGf~~~~~~~~~~i~~~~~~l~s~~l~s~~--~~i~~~lne~~~~~~~sqi~~fl~  101 (210)
T d1sqia2          24 IIDHIVGNQPDQEMESASEWYLKNLQFHRFWSVDDTQVHTEYSSLRSIVVANYE--ESIKMPINEPAPGRKKSQIQEYVD  101 (210)
T ss_dssp             EEEEEEEECCTTCHHHHHHHHHHHHCCEEECCC-----------CEEEEEECTT--SCCEEEEEECC-----CHHHHHHH
T ss_pred             eeCceEeccCchhHHHHHHHHHHHhCCEEEEEecccccCCceeEEEEEEEEecC--ccccccccccCCCCcccHHHHHHh
Confidence            59999999987  99999999999999876543211     1112222233222  2344444332221  11       


Q ss_pred             eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCCc
Q 022871          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQPG  256 (291)
Q Consensus       217 ~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~  256 (291)
                      ...|+|++||||.|+||.+++++|    +++|++++..|.
T Consensus       102 ~~~G~GiQHIAf~t~DI~~av~~L----~~~Gv~fL~~P~  137 (210)
T d1sqia2         102 YNGGAGVQHIALRTEDIITTIRHL----RERGMEFLAVPS  137 (210)
T ss_dssp             HHTSSEEEEEEEEESCHHHHHHHH----HHHTCCBCCCCH
T ss_pred             hcCCCCeeEEEEEcCCHHHHHHHH----HHcCCCCCCCCc
Confidence            235789999999999999999999    999999998883

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=99.06  E-value=3e-10  Score=88.82  Aligned_cols=102  Identities=14%  Similarity=0.190  Sum_probs=66.6

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccC-----CcceeEEEecccCCCceeEEEeeeec---Ccce-------
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKP-----EYKYTLAMLGYAEEDQTTVLELTYNY---GVTE-------  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~l~~~~---~~~~-------  216 (291)
                      .+++||++.|+|++++..||+++|||+........     ........+..+.  ....+.+....   ...+       
T Consensus         8 ~~IDHI~i~V~dld~a~~fY~~vLGf~~~~~~~~~~i~~~~~~l~s~v~~~~~--g~v~~~l~E~~~~~~~~s~i~~FL~   85 (224)
T d1sp8a2           8 SRFDHIVGNVPELAPAAAYFAGFTGFHEFAEFTTEDVGTAESGLNSMVLANNS--ENVLLPLNEPVHGTKRRSQIQTFLD   85 (224)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEEC--------CEEEEEEECSS--SCCEEEEEEECCCSSSCCHHHHHHH
T ss_pred             CeeeeeEEeccCHHHHHHHHHHHhCCEEEEEeccccccccceeEEEEEEEcCC--CccceeeeeecCCCCCccHHHHHHH
Confidence            46899999999999999999999999876554321     1222333333222  23444444322   1111       


Q ss_pred             eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeeecCC
Q 022871          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKITRQP  255 (291)
Q Consensus       217 ~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~~~p  255 (291)
                      ...+.|++||||.|+||.++++.|+++..++|+++...|
T Consensus        86 ~~~g~GiqHIAf~vdDI~~av~~L~arGv~~G~~fl~~p  124 (224)
T d1sp8a2          86 HHGGPGVQHMALASDDVLRTLREMQARSAMGGFEFMAPP  124 (224)
T ss_dssp             HHTSSEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCC
T ss_pred             hccCCCceeEEEEeCCHHHHHHHHHhccccccceecccc
Confidence            124679999999999999999999444344567766665

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.05  E-value=6.8e-10  Score=80.49  Aligned_cols=115  Identities=17%  Similarity=0.085  Sum_probs=71.0

Q ss_pred             eeeC-CccccHHHHHhhhCCeeeeeeccCCccee------------EEEecccCCCceeEEEeeeecCcceeccCcceeE
Q 022871          159 LRVG-DLGRSIKFYEKALGMKLLRTVDKPEYKYT------------LAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQ  225 (291)
Q Consensus       159 l~v~-D~~~~~~Fy~~~lG~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h  225 (291)
                      |... |.+++.+||+++||+++.......+....            ...+...    +..+......+..+ ...++..+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~----g~~~~~~d~~~~~~-~~~~~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVG----SFALMASDNHPAYP-YEGIKGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEET----TEEEEEEECCTTSC-CCCCCSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEc----CeEEEecccCCccc-ccCCCcEE
Confidence            4454 99999999999999998765433221111            0111111    11221211111111 12234567


Q ss_pred             EEEEecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          226 VAISTDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       226 ~~~~v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +++.+++.+. .+++++. .++|++++.+|...++ |.+.++|+||+|+.|+|...
T Consensus        83 ~~l~~~~~d~-~~~~~~~-l~~G~~v~~p~~~~~w-G~~~g~v~Dp~G~~W~i~~~  135 (137)
T d1u6la_          83 ISLNVDSKAE-AERLFNA-LAEGGSVQMPLGPTFW-AASFGMFTDRFGVAWMVNCE  135 (137)
T ss_dssp             EEEECSSHHH-HHHHHHH-HHTTSEEEEEEEEETT-EEEEEEEECTTSCEEEEEES
T ss_pred             EEEEcCCHHH-HHHHHhh-cccCceeecCccccCC-CcEEEEEECCCCCEEEEEec
Confidence            8888887443 3343333 6789999999999999 46899999999999999764

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.03  E-value=2.3e-09  Score=83.95  Aligned_cols=96  Identities=19%  Similarity=0.343  Sum_probs=64.3

Q ss_pred             CCceeeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeecCC-----CceeeEEEecCCCCceeEEEeecc----CC---CCc
Q 022871           19 KDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPE-----EKYSNAFLGFGPEQSHFVVELTYN----YG---VTS   86 (291)
Q Consensus        19 ~~~~~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~   86 (291)
                      ..+.+|+||++.|+|++++.+||+++||+.........+     .......+..++..  +.+.+...    ..   ...
T Consensus        18 ~gl~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~s~~g~--v~~~l~E~~~~~~~~sqi~~   95 (230)
T d1sqda2          18 YGIRRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLASNDEM--VLLPINEPVHGTKRKSQIQT   95 (230)
T ss_dssp             SSEEEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEECTTSC--SEEEEEEECCC---CCHHHH
T ss_pred             CCcCccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeeccccCCCcc--cceeEEeecCCCCCcchHHH
Confidence            459999999999999999999999999999887754322     11122222222222  22333321    11   111


Q ss_pred             ---ccCCCCeeEEEEEeCCHHHHHHHHHHcCCe
Q 022871           87 ---YDIGTGFGHFAIATEDVYKLVENIRAKGGN  116 (291)
Q Consensus        87 ---~~~~~g~~~i~~~v~d~~~~~~~l~~~G~~  116 (291)
                         ...|.|++||||.|+|+.++.++|+++|..
T Consensus        96 FL~~~~G~GiQHIAf~tdDI~aav~~LrarG~~  128 (230)
T d1sqda2          96 YLEHNEGAGLQHLALMSEDIFRTLREMRKRSSI  128 (230)
T ss_dssp             HHHHHTSCEEEEEEEEESCHHHHHHHHHHHGGG
T ss_pred             HHhhccCCceeEEEEEeCCHHHHHHHHHHhhcc
Confidence               126889999999999999999999997643

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.01  E-value=6.8e-09  Score=75.03  Aligned_cols=114  Identities=16%  Similarity=0.106  Sum_probs=73.6

Q ss_pred             EEeC-CHHHHHHHHHHhcCCEEEEeeecCCC------------ceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeE
Q 022871           29 YRVG-DLDRTIKFYTECFGMKLLRKRDVPEE------------KYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGH   95 (291)
Q Consensus        29 l~v~-d~~~a~~fy~~~LG~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   95 (291)
                      |..+ |.++|++||+++||+++.......+.            ...++.+.+++.  .+  .........+...+ +-.+
T Consensus         8 l~f~g~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~--~~--~~~d~~~~~~~~~~-~~~~   82 (137)
T d1u6la_           8 LIFNGNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSF--AL--MASDNHPAYPYEGI-KGCS   82 (137)
T ss_dssp             EEESSCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTE--EE--EEEECCTTSCCCCC-CSEE
T ss_pred             EEECCCHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCe--EE--EecccCCcccccCC-CcEE
Confidence            3445 99999999999999999876543321            122233333321  11  11111111111222 3456


Q ss_pred             EEEEeCCHH--HHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCC
Q 022871           96 FAIATEDVY--KLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRG  148 (291)
Q Consensus        96 i~~~v~d~~--~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~  148 (291)
                      +++.+++.+  +.+.++.++|+++..++.+.++|.+ +++|+||+|+.|.|....
T Consensus        83 ~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~-~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          83 ISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAAS-FGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             EEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEE-EEEEECTTSCEEEEEESC
T ss_pred             EEEEcCCHHHHHHHHhhcccCceeecCccccCCCcE-EEEEECCCCCEEEEEecC
Confidence            778876544  5577778899999999999999775 589999999999987653

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.78  E-value=1.7e-08  Score=78.83  Aligned_cols=99  Identities=13%  Similarity=0.215  Sum_probs=63.8

Q ss_pred             CCceeEEeeeCCccccHHHHHhhhCCeeeeeeccCC-----cceeEEEecccCCCceeEEEeeeecCc---ce-------
Q 022871          152 EPLCQVMLRVGDLGRSIKFYEKALGMKLLRTVDKPE-----YKYTLAMLGYAEEDQTTVLELTYNYGV---TE-------  216 (291)
Q Consensus       152 ~~~~hv~l~v~D~~~~~~Fy~~~lG~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~-------  216 (291)
                      .+++||++.|+|++++.+||+++||+.........+     .......+.  ..+....+.+..+..+   ..       
T Consensus        21 ~~IDHI~iaVpdld~a~~~y~~~lG~~~~~~~~~~di~~~~~~l~s~v~~--s~~g~v~~~l~E~~~~~~~~sqi~~FL~   98 (230)
T d1sqda2          21 RRLDHAVGNVPELGPALTYVAGFTGFHQFAEFTADDVGTAESGLNSAVLA--SNDEMVLLPINEPVHGTKRKSQIQTYLE   98 (230)
T ss_dssp             EEEEEEEEECSCHHHHHHHHHHHHCCEEEEEEC--------CCEEEEEEE--CTTSCSEEEEEEECCC---CCHHHHHHH
T ss_pred             CccCcceecccCHHHHHHHHHHHcCCeeeEEecccccccceeeEeecccc--CCCcccceeEEeecCCCCCcchHHHHHh
Confidence            459999999999999999999999998776543222     111222222  1222344444433211   11       


Q ss_pred             eccCcceeEEEEEecchhhhHHHHHHHHHHhCCeee
Q 022871          217 YTKGNAYAQVAISTDDVYKSAEVVNLVTQELGGKIT  252 (291)
Q Consensus       217 ~~~~~~~~h~~~~v~di~~~~~~l~~~~~~~G~~~~  252 (291)
                      ...|.|++||||.|+||.++++.|+++-..+|+++.
T Consensus        99 ~~~G~GiQHIAf~tdDI~aav~~LrarG~~~G~~f~  134 (230)
T d1sqda2          99 HNEGAGLQHLALMSEDIFRTLREMRKRSSIGGFDFM  134 (230)
T ss_dssp             HHTSCEEEEEEEEESCHHHHHHHHHHHGGGTSCCBC
T ss_pred             hccCCceeEEEEEeCCHHHHHHHHHHhhcccCcccc
Confidence            235789999999999999999999333223466655

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.77  E-value=1.4e-07  Score=67.50  Aligned_cols=114  Identities=12%  Similarity=0.058  Sum_probs=68.2

Q ss_pred             EeeeCCccccHHHHHhhhCCeeeeeec-------cCCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEe
Q 022871          158 MLRVGDLGRSIKFYEKALGMKLLRTVD-------KPEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIST  230 (291)
Q Consensus       158 ~l~v~D~~~~~~Fy~~~lG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v  230 (291)
                      .+.-.+.+++.+||+++||...+....       ..++...-..+..+    +..+-+....+...... ++...+++.+
T Consensus        11 ~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~----~~~i~~~d~~~~~~~~~-~~~~s~~l~~   85 (134)
T d1u7ia_          11 MFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLG----DQSVHCIDSHVRHAFDF-TPAFSFFVDC   85 (134)
T ss_dssp             EEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEET----TEEEEEEEESSCCSCCC-CTTEEEEEEC
T ss_pred             EECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEEC----CEEEEEecCCCCCCCCC-CCceEEEEEe
Confidence            333358899999999999986543321       11122211222221    22232332222211222 2335678888


Q ss_pred             cchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEE
Q 022871          231 DDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLV  279 (291)
Q Consensus       231 ~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~  279 (291)
                      ++ .+..+++++. .+.|++++.++...+++ .++..++||.|+.|.|.
T Consensus        86 ~~-~d~~~~~~~~-l~~gg~v~~p~~~~~~g-~~~g~v~D~fGv~W~i~  131 (134)
T d1u7ia_          86 ES-NAQIERLAEA-LSDGGKALMPLGDYGFS-QRFAWLADRFGVSWQLN  131 (134)
T ss_dssp             CC-HHHHHHHHHH-HHTTSEEEEEEECCSSS-SEEEEEECTTSCEEEEE
T ss_pred             cc-HHHHHHHHHH-HhcCCEEecCccccccc-ceEEEEECCCCCEEEEE
Confidence            77 3334444444 56789999999998884 68999999999999986

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.63  E-value=1.3e-06  Score=62.26  Aligned_cols=115  Identities=15%  Similarity=0.190  Sum_probs=72.8

Q ss_pred             EEEEEeCCHHHHHHHHHHhcCCEEEEeee-------cCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           26 HAVYRVGDLDRTIKFYTECFGMKLLRKRD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        26 hv~l~v~d~~~a~~fy~~~LG~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ++.+.-.|.++|++||+++||.+.+.+..       .+.+...++.+.+++.  .+.+  ...........+.+ .++++
T Consensus         9 yL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~--~i~~--~d~~~~~~~~~~~~-~s~~l   83 (134)
T d1u7ia_           9 FLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQ--SVHC--IDSHVRHAFDFTPA-FSFFV   83 (134)
T ss_dssp             EEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTE--EEEE--EEESSCCSCCCCTT-EEEEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCE--EEEE--ecCCCCCCCCCCCc-eEEEE
Confidence            45555568999999999999987654421       2233444556666432  2222  11111122222323 45677


Q ss_pred             EeCCHHH--HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           99 ATEDVYK--LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~--~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .+++.++  .+.+..++|.++..++.+.++|.+ +..++||.|+.|.|.-
T Consensus        84 ~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  132 (134)
T d1u7ia_          84 DCESNAQIERLAEALSDGGKALMPLGDYGFSQR-FAWLADRFGVSWQLNL  132 (134)
T ss_dssp             ECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSE-EEEEECTTSCEEEEEE
T ss_pred             EeccHHHHHHHHHHHhcCCEEecCcccccccce-EEEEECCCCCEEEEEc
Confidence            7765443  355556778899988888888776 4889999999998864

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.33  E-value=3.4e-06  Score=59.60  Aligned_cols=112  Identities=12%  Similarity=0.028  Sum_probs=65.7

Q ss_pred             EeeeC-CccccHHHHHhhhCCeeeeeec-c------CCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEE
Q 022871          158 MLRVG-DLGRSIKFYEKALGMKLLRTVD-K------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAIS  229 (291)
Q Consensus       158 ~l~v~-D~~~~~~Fy~~~lG~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~  229 (291)
                      -|.+. |.+++.+||+++||-..+.... .      .++...-..+..+    +..+-+....+.    .+ ....+.+.
T Consensus         9 yl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~----g~~~~~~d~~~~----~~-~~~s~~v~   79 (129)
T d1tsja_           9 FLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLN----GQVFMAIDANSG----TE-LPISLFVT   79 (129)
T ss_dssp             EEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEET----TEEEEEEC------------CCCEEEE
T ss_pred             EEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEEC----CEEEEeecCCCC----CC-CCEEEEec
Confidence            45665 9999999999999754332221 1      1122222222221    222322221111    11 12347778


Q ss_pred             ecchhhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEec
Q 022871          230 TDDVYKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDN  281 (291)
Q Consensus       230 v~di~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~  281 (291)
                      +++.+ ..++++++| +.|+++..++...++ +.++..++||.|+.|.|..+
T Consensus        80 ~~~~~-e~~~~~~~L-~~gg~v~~p~~~~~~-g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          80 VKDTI-EMERLFNGL-KDEGAILMPKTNMPP-YREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CSSHH-HHHHHHHHH-HTTCEEEEEEEEETT-EEEEEEEECTTSCEEEEEEC
T ss_pred             cCCHH-HHHHHHHHh-ccCCEEecccccccc-cceEEEEECCCCCEEEEeCC
Confidence            88744 445555554 467799999988888 46889999999999999753

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=98.11  E-value=8.5e-05  Score=52.11  Aligned_cols=109  Identities=13%  Similarity=0.139  Sum_probs=66.9

Q ss_pred             EEEEeC-CHHHHHHHHHHhcCCEEEEee-------ecCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEE
Q 022871           27 AVYRVG-DLDRTIKFYTECFGMKLLRKR-------DVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAI   98 (291)
Q Consensus        27 v~l~v~-d~~~a~~fy~~~LG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~   98 (291)
                      ..|..+ |.++|++||+++||-..+.+.       ...++...++.+.+++.  .+.+  ......  .  + .-.++++
T Consensus         8 Pyl~f~g~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~--~~~~--~d~~~~--~--~-~~~s~~v   78 (129)
T d1tsja_           8 TFLMFNNQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQ--VFMA--IDANSG--T--E-LPISLFV   78 (129)
T ss_dssp             EEEECSSCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTE--EEEE--EC------------CCCEEE
T ss_pred             EEEEECCCHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCE--EEEe--ecCCCC--C--C-CCEEEEe
Confidence            566676 999999999999966443332       11234455566666532  2222  111111  1  1 1124677


Q ss_pred             EeCCHHH---HHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEe
Q 022871           99 ATEDVYK---LVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQ  146 (291)
Q Consensus        99 ~v~d~~~---~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~  146 (291)
                      .+++.++   ++++| ++|.++..++.+.++|.+ +..++||.|+.|.|..
T Consensus        79 ~~~~~~e~~~~~~~L-~~gg~v~~p~~~~~~g~~-~g~v~D~fGv~W~i~~  127 (129)
T d1tsja_          79 TVKDTIEMERLFNGL-KDEGAILMPKTNMPPYRE-FAWVQDKFGVSFQLAL  127 (129)
T ss_dssp             ECSSHHHHHHHHHHH-HTTCEEEEEEEEETTEEE-EEEEECTTSCEEEEEE
T ss_pred             ccCCHHHHHHHHHHh-ccCCEEecccccccccce-EEEEECCCCCEEEEeC
Confidence            7777655   44555 466788888888888665 5889999999999865

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.73  E-value=0.021  Score=40.63  Aligned_cols=102  Identities=11%  Similarity=-0.010  Sum_probs=56.5

Q ss_pred             CCccccHHHHHhhhCCeeeeeec-c-------CCcceeEEEecccCCCceeEEEeeeecCcceeccCcceeEEEEEecch
Q 022871          162 GDLGRSIKFYEKALGMKLLRTVD-K-------PEYKYTLAMLGYAEEDQTTVLELTYNYGVTEYTKGNAYAQVAISTDDV  233 (291)
Q Consensus       162 ~D~~~~~~Fy~~~lG~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~~~v~di  233 (291)
                      .+.+++.+||.++||-..+.... .       ..+...-..+..+    +..+-...  ...+...+ ...++.+.++| 
T Consensus        11 Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~----g~~lm~sD--~~~~~~~~-~~~sl~l~~d~-   82 (156)
T d1u69a_          11 SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVM----GIPCLGLN--GGPAFRHS-EAFSFQVATDD-   82 (156)
T ss_dssp             SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEET----TEEEEEEE--CCTTCCCC-TTEEEEEEESS-
T ss_pred             CcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEEC----CeEEEeec--CCCCCCCC-CCeEEEEecCC-
Confidence            68999999999999643222211 1       1111222222221    12221211  11122233 33578999998 


Q ss_pred             hhhHHHHHHHHHHhCCeeecCCcccCCCCceEEEEECCCCCeEEEEech
Q 022871          234 YKSAEVVNLVTQELGGKITRQPGSIPGLNTKITSFVDPDGWKTVLVDNE  282 (291)
Q Consensus       234 ~~~~~~l~~~~~~~G~~~~~~p~~~~~~~~~~~~~~Dp~G~~iel~~~~  282 (291)
                      .+.++++++.|.+.| ++..     ++     ..++|+.|+.|.|+.+.
T Consensus        83 ~eE~d~~f~~LsegG-~~~~-----~~-----G~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          83 QAETDRLWNAIVDNG-GEES-----AC-----GWCRDKWGISWQITPRV  120 (156)
T ss_dssp             HHHHHHHHHHHHHTT-CEEC-----ST-----TEEECTTSCEEEEEEHH
T ss_pred             HHHHHHHHHHHhccC-CCCC-----CC-----eEEECCCCCEEEeChHH
Confidence            555667777767655 3321     22     25999999999999653

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.69  E-value=0.2  Score=35.33  Aligned_cols=127  Identities=17%  Similarity=0.183  Sum_probs=73.1

Q ss_pred             EeCCHHHHHHHHHHhcCCEEEEe-ee-------cCCCceeeEEEecCCCCceeEEEeeccCCCCcccCCCCeeEEEEEeC
Q 022871           30 RVGDLDRTIKFYTECFGMKLLRK-RD-------VPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYDIGTGFGHFAIATE  101 (291)
Q Consensus        30 ~v~d~~~a~~fy~~~LG~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~v~  101 (291)
                      --.|-++|++||.++||-..+.. ..       .+.+...++.+.+++  ..+..  ..  ....+..+++ .++++.++
T Consensus         9 F~Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g--~~lm~--sD--~~~~~~~~~~-~sl~l~~d   81 (156)
T d1u69a_           9 YDSAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMG--IPCLG--LN--GGPAFRHSEA-FSFQVATD   81 (156)
T ss_dssp             ESSCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETT--EEEEE--EE--CCTTCCCCTT-EEEEEEES
T ss_pred             ECCcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECC--eEEEe--ec--CCCCCCCCCC-eEEEEecC
Confidence            34689999999999996433322 21       112344555566543  22221  11  1222334444 46778887


Q ss_pred             C---HHHHHHHHHHcCCeEecCCcccCCCceEEEEEECCCCCEEEEEeCCCCCCCceeEEeeeCCccccHHHHHhhhCCe
Q 022871          102 D---VYKLVENIRAKGGNVTREPGPLKGGTTHIAFVKDPDGYIFELIQRGPTPEPLCQVMLRVGDLGRSIKFYEKALGMK  178 (291)
Q Consensus       102 d---~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~dp~G~~iel~~~~~~~~~~~hv~l~v~D~~~~~~Fy~~~lG~~  178 (291)
                      |   ++.++++|.+.|- +..     +.|     -++|.-|..|.|+.+.     + .--+.-.|.+++.+=+...|.+.
T Consensus        82 ~~eE~d~~f~~LsegG~-~~~-----~~G-----~v~DkFGV~Wqi~~~~-----~-~~~~~~~~~~~~~~~~~a~~~m~  144 (156)
T d1u69a_          82 DQAETDRLWNAIVDNGG-EES-----ACG-----WCRDKWGISWQITPRV-----L-SEAIASPDRAAARRAFEAMMTMG  144 (156)
T ss_dssp             SHHHHHHHHHHHHHTTC-EEC-----STT-----EEECTTSCEEEEEEHH-----H-HHHHTCSSHHHHHHHHHHHTTCS
T ss_pred             CHHHHHHHHHHHhccCC-CCC-----CCe-----EEECCCCCEEEeChHH-----H-HHHhcCCCHHHHHHHHHHHHcCc
Confidence            6   5567788887763 222     222     3799999999998763     0 00123346677777777777665


Q ss_pred             ee
Q 022871          179 LL  180 (291)
Q Consensus       179 ~~  180 (291)
                      ..
T Consensus       145 k~  146 (156)
T d1u69a_         145 RI  146 (156)
T ss_dssp             SC
T ss_pred             Ce
Confidence            43

>d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Acyl-CoA N-acyltransferases (Nat)
superfamily: Acyl-CoA N-acyltransferases (Nat)
family: N-acetyl transferase, NAT
domain: Probable acetyltransferase Atu2258
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=84.04  E-value=1.1  Score=30.37  Aligned_cols=31  Identities=13%  Similarity=0.241  Sum_probs=24.0

Q ss_pred             eeeEEEEEeCCHHHHHHHHHHhcCCEEEEeeec
Q 022871           23 RFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDV   55 (291)
Q Consensus        23 ~i~hv~l~v~d~~~a~~fy~~~LG~~~~~~~~~   55 (291)
                      ++.++.+.+.|.. +.+||++ +||+.+.+.+.
T Consensus        93 g~~~i~l~~~n~~-a~~fY~k-~GF~~~g~~~~  123 (137)
T d2g3aa1          93 GCMGAYIDTMNPD-ALRTYER-YGFTKIGSLGP  123 (137)
T ss_dssp             TCCEEEEEESCHH-HHHHHHH-HTCEEEEEECC
T ss_pred             CCceEEEecccHh-hHHHHHh-CCCEEEEEECC
Confidence            4456778888764 7999998 99999887653