Citrus Sinensis ID: 023102


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------
MASMDPNLNTNIDELVSVQSPPSEKPKLCLVWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKPAHAISPGSLSFKLRRLKSNEQAHNNDPLDAL
cccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHEEEEccccccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccEEEEEcHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHcccccccccccccc
**************************KLCLVWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRE***********************************
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MASMDPNLNTNIDELVSVQSPPSEKPKLCLVWNEHYPPGFLRKVIAEIIATYLLVFVTCGSAALSAYDEHRVSKLGASVAGGLIVTVMIYAVGHISGAHMNPAVTLAFAAVRHFPWKQVPIYAAAQLTGAVSASLTLRVLLHPIKHIGTTSPSGSDLQALIMEIVVTFSMMFVTSAVATDTKAIGELAGIAVGSAVCITSVLAGPVSGGSMNPARTVGPAIASSFYKGIWVYLVGPVTGTFMGAWSYNMIRETDKPAHAISPGSLSFKLRRLKSNEQAHNNDPLDAL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Aquaporin NIP2-1 Silicon transporter. Silicon is beneficial to plant growth and helps plants to overcome abiotic and biotic stresses by preventing lodging (falling over) and increasing resistance to pests and diseases, as well as other stresses.probableQ6Z2T3
Probable aquaporin NIP4-2 Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.probableQ8W036
Aquaporin NIP2-2 Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.probableQ9ATN2

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3CN5, chain A
Confidence level:very confident
Coverage over the Query: 35-254
View the alignment between query and template
View the model in PyMOL
Template: 3IYZ, chain A
Confidence level:very confident
Coverage over the Query: 36-252
View the alignment between query and template
View the model in PyMOL