Citrus Sinensis ID: 023109
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 287 | 2.2.26 [Sep-21-2011] | |||||||
| Q08623 | 228 | Pseudouridine-5'-monophos | yes | no | 0.745 | 0.938 | 0.399 | 2e-34 | |
| Q9D5U5 | 234 | Pseudouridine-5'-monophos | yes | no | 0.777 | 0.952 | 0.378 | 3e-32 | |
| Q94529 | 231 | Probable pseudouridine-5' | no | no | 0.759 | 0.943 | 0.373 | 1e-30 | |
| O14165 | 249 | Uncharacterized protein C | yes | no | 0.749 | 0.863 | 0.284 | 4e-19 | |
| O59760 | 236 | Putative uncharacterized | no | no | 0.686 | 0.834 | 0.299 | 1e-16 | |
| Q86ZR7 | 236 | Putative uncharacterized | yes | no | 0.756 | 0.919 | 0.3 | 6e-16 | |
| O33513 | 227 | Protein CbbY OS=Rhodobact | no | no | 0.668 | 0.845 | 0.283 | 1e-15 | |
| Q9X0Y1 | 216 | Phosphorylated carbohydra | yes | no | 0.613 | 0.814 | 0.301 | 2e-15 | |
| P77475 | 188 | Fructose-1-phosphate phos | N/A | no | 0.602 | 0.920 | 0.318 | 3e-15 | |
| P54607 | 220 | Uncharacterized protein Y | yes | no | 0.707 | 0.922 | 0.286 | 2e-14 |
| >sp|Q08623|HDHD1_HUMAN Pseudouridine-5'-monophosphatase OS=Homo sapiens GN=HDHD1 PE=1 SV=3 | Back alignment and function desciption |
|---|
Score = 145 bits (367), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D+DG LL+T+ ++S V + +Y K++ K ++GK LE A II++ LP +
Sbjct: 11 LIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMS 70
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E V E + + +PGA +LI HL HG+P ALA++S A+ + K S +
Sbjct: 71 KEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEF 130
Query: 132 NESFS-VIVGSD-EVRTGKPSPDIFLEAAKRLNMEPS--SSLVIEDSVIGVVAGKAAGME 187
FS +++G D EV+ GKP PDIFL AKR + P+ LV ED+ GV A AAGM+
Sbjct: 131 FSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQ 190
Query: 188 VVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
VV VP T A V+NSL D +PE +GLP ++
Sbjct: 191 VVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 228
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Homo sapiens (taxid: 9606) EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: nEC: 6 |
| >sp|Q9D5U5|HDHD1_MOUSE Pseudouridine-5'-monophosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1 | Back alignment and function description |
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Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 124/227 (54%), Gaps = 4/227 (1%)
Query: 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV 63
P + ++ +I DLDG +LNT+ ++++V + +YGK+++ K ++GK LE A IV
Sbjct: 8 PQFRPVTPLIFDLDGLILNTEDLYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIV 67
Query: 64 EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E LP +K E + E L +PGA LI HL H +P ALA++S T ++
Sbjct: 68 EFLNLPISKEELLKESQEKLQMVLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQT 127
Query: 124 KISYQHGWNESF-SVIVGSD-EVRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVV 179
K S G+ F +++G D EV+ GKP DIFL AKR + +P LV EDS GV
Sbjct: 128 KTSRHTGFFGLFHHIVLGDDPEVKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVE 187
Query: 180 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
A GM+VV VP A V++SL D +PE +GLP F +
Sbjct: 188 AAIHCGMQVVMVPHENLSADLTRKATLVLSSLHDFKPELFGLPAFTE 234
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Pseudouridine is then excreted intact in urine. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|Q94529|GS1_DROME Probable pseudouridine-5'-monophosphatase OS=Drosophila melanogaster GN=Gs1l PE=2 SV=2 | Back alignment and function description |
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Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 12/230 (5%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
L+K+ CV D+DG LL+T+ +++ + L YGK + K +++G A +VE
Sbjct: 6 LRKVTHCV-FDMDGLLLDTERLYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
Y LP + E+ + + + + +PGA RL++HL + VP LA++S +E K
Sbjct: 65 HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
+ QH E FS+ + GS EV GKP+PDIFL AA R + +PS LV EDS
Sbjct: 125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
GV A +AGM+VV VP + + A +V+ SL D +PE++GLP F D
Sbjct: 182 GVTAANSAGMQVVMVPDPRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
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Dephosphorylates pseudouridine 5'-phosphate, a potential intermediate in rRNA degradation. Drosophila melanogaster (taxid: 7227) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: n EC: 6 |
| >sp|O14165|YDX1_SCHPO Uncharacterized protein C4C5.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4C5.01 PE=3 SV=2 | Back alignment and function description |
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Score = 95.5 bits (236), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEA 59
MA K M+C + D+DG L++++ ++++ L +YGK+ K +++G+ A
Sbjct: 1 MAAKHVKYMAC-LFDMDGLLVDSETIYTKTTNLILDRYGKDPLPISVKAQMMGRPGSAAA 59
Query: 60 AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA 119
++++ +P +FV+E + + +K +PGA LI +LS HG+ + LA++S+ A
Sbjct: 60 KVVIDWSNIPMTPQQFVDEQQVIRAKFWSSLKPMPGAESLINNLSNHGIDIGLATSSNTA 119
Query: 120 TIESKISYQHGWNESF--SVIVGSDEVRT---GKPSPDIFLEAAKRLN----------ME 164
K ++ E F +VI G + GKP PDI+L+ +N +
Sbjct: 120 NYNMKTAHLKHIFEKFGKNVITGDNPSIAPGRGKPFPDIWLKVLNLINESRKQRGLKALT 179
Query: 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
PS + EDS+ GV + KAAGM V+ VP + +E+++S + P
Sbjct: 180 PSQCIAFEDSIPGVKSAKAAGMHVIWVPDAAIKNLVGDQLNEIVDSQCETLP 231
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O59760|YJM7_SCHPO Putative uncharacterized hydrolase C1020.07 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC1020.07 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 87.0 bits (214), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 112/227 (49%), Gaps = 30/227 (13%)
Query: 13 ILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+DG L++T+ ++++ L +Y K + K K++G+T E + I ++ G+
Sbjct: 7 LFDMDGLLVDTESIYTKSTNIILKRYNKGPFSMEVKAKMMGRTSKEASRIFLDWSGIDLT 66
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
E++ ++ K LPG L+ L +P+ALA++S E K ++
Sbjct: 67 CEEYIALQRETQAELWRHTKPLPGVMNLLSKLKSLNIPIALATSSDTHNFEKKSAHLSHL 126
Query: 132 NESF--SVIVGSDE---VRTGKPSPDIFLEAAKRLN----------MEPSSSLVIEDSVI 176
+ F ++I G D V GKP PDI+ A K +N + P + LV EDS+
Sbjct: 127 FDHFDGNIITGDDPRLPVGRGKPHPDIWFIALKMINDKRKAQGQAEILPENCLVFEDSIT 186
Query: 177 GVVAGKAAGMEVVAVPSL---------PKQTHRYTAADEVINSLLDL 214
GV +G+AAGM+VV VP + P+Q AAD+ I +L L
Sbjct: 187 GVQSGRAAGMKVVWVPDVNILPFFSLSPEQ-----AADKHITKVLSL 228
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q86ZR7|YKD3A_YEAST Putative uncharacterized hydrolase YKL033W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKL033W-A PE=1 SV=2 | Back alignment and function description |
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Score = 85.1 bits (209), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 23/240 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---EWDGREKHKIVGKTPLE 57
M P+ + + D+DG L+NT+ +++E L L ++GK WD K K+ G E
Sbjct: 1 MTHPVA--VKACLFDMDGLLINTEDIYTETLNETLAEFGKGPLTWD--VKIKLQGLPGPE 56
Query: 58 EAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
++E Y LP E+ ++ S + LPGA L+K+L +P+AL ++S+
Sbjct: 57 AGKRVIEHYKLPITLDEYDERNVALQSLKWGTCEFLPGALNLLKYLKLKNIPIALCTSSN 116
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFLEAAKRLN------MEPSS 167
+ K S+ + F IV D+ R GKP PDI+ K LN ++P
Sbjct: 117 KTKFRGKTSHLEEGFDLFDTIVTGDDPRIAKGRGKPFPDIWQLGLKELNEKFHTDIKPDE 176
Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS------LPKQTHRYTAADEVINSLLDLRPEKWGL 221
+V ED + GV + KA G V+ VP L E+++SL L K+GL
Sbjct: 177 CIVFEDGIPGVKSAKAFGAHVIWVPHPEAHAVLGDTEALLAGKGELLSSLEKLEMSKYGL 236
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Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O33513|CBBY_RHOCA Protein CbbY OS=Rhodobacter capsulatus GN=cbbY PE=3 SV=1 | Back alignment and function description |
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Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 20/212 (9%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTP--LEEAAIIVED 65
+ +I D+DGTL T+ + + G +W +E ++ + +T E A E+
Sbjct: 3 LKALIFDVDGTLAETEEVHRQAFNETFAAQGLDWYWSKEDYRTLLRTTGGKERMAKHREN 62
Query: 66 YG----------LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
G L AK + E+ + +V LPG LI G+ +A+A+
Sbjct: 63 LGSGPSDAKIADLHKAKTQRYVEIIAS-----GQVGLLPGVAELIDRAKASGLRLAIATT 117
Query: 116 SHRATIESKI--SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
+ RA +++ I ++ + F VI DEV KP+PD++L A + L + P++ L ED
Sbjct: 118 TTRANVDALIAATFSKPAGDIFEVIAAGDEVAQKKPAPDVYLRALQGLGLPPAACLAFED 177
Query: 174 SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
S G+ + +AAG+ VV PS + ++AAD
Sbjct: 178 SRAGLASARAAGLRVVLTPSEYTRGDDFSAAD 209
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Rhodobacter capsulatus (taxid: 1061) |
| >sp|Q9X0Y1|P1254_THEMA Phosphorylated carbohydrates phosphatase TM_1254 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=TM_1254 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 10/186 (5%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
M VI D+DG L++T+ ++ E + YGK + +I+G E I++E +
Sbjct: 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEI 60
Query: 69 PCAKHEFVNEVYS----MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS-HRATIES 123
+ F V+ +FS+ L K PG ++ + + +ALA+++ R +E
Sbjct: 61 KDSLENFKKRVHEEKKRVFSELL---KENPGVREALEFVKSKRIKLALATSTPQREALER 117
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ + F V+V D+V+ GKP P+I+L +RLN+ P +V EDS GV A K+
Sbjct: 118 --LRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKS 175
Query: 184 AGMEVV 189
AG+E +
Sbjct: 176 AGIERI 181
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Displays high phosphatase activity toward erythrose 4-phosphate, fructose 6-phosphate, 2-deoxyglucose 6-phosphate, and mannose 6-phosphate. May have a role in the intracellular metabolism of many phosphorylated carbohydrates. Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) (taxid: 243274) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P77475|YQAB_ECOLI Fructose-1-phosphate phosphatase YqaB OS=Escherichia coli (strain K12) GN=yqaB PE=1 SV=1 | Back alignment and function description |
|---|
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 95/185 (51%), Gaps = 12/185 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D+DGT+L+T+ + + L YG ++D + + G A I+E
Sbjct: 8 LIFDMDGTILDTEPTHRKAWREVLGHYGLQYDIQAMIALNGSPTWRIAQAIIELNQADLD 67
Query: 72 KHEFVNE----VYSMFSDHLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKIS 126
H E V SM D V+ LP + ++K S HG PMA+ + S A E+ ++
Sbjct: 68 PHALAREKTEAVRSMLLD---SVEPLPLVD-VVK--SWHGRRPMAVGTGSESAIAEALLA 121
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186
+ G F +V +D V+ KP+PD FL A+R+ ++P+ +V ED+ G+ A +AAGM
Sbjct: 122 HL-GLRHYFDAVVAADHVKHHKPAPDTFLLCAQRMGVQPTQCVVFEDADFGIQAARAAGM 180
Query: 187 EVVAV 191
+ V V
Sbjct: 181 DAVDV 185
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Catalyzes strongly the dephosphorylation of fructose-1-phosphate (Fru1P) and slightly the dephosphorylation of 6-phosphogluconate (6P-Glu). It has low beta-phosphoglucomutase activity. Escherichia coli (strain K12) (taxid: 83333) EC: 3 EC: . EC: 1 EC: . EC: 3 EC: . EC: - |
| >sp|P54607|YHCW_BACSU Uncharacterized protein YhcW OS=Bacillus subtilis (strain 168) GN=yhcW PE=3 SV=1 | Back alignment and function description |
|---|
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 10/213 (4%)
Query: 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-----WDGREKHKIVGKTPLEEAAII 62
++ +I D DG +L+T+ EVL+ ++G W G+ G P E +
Sbjct: 1 MIKALIFDFDGLILDTETHEYEVLQEIFEEHGSVLPLSVW-GKVIGTAAGFRPFE---YL 56
Query: 63 VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
E G E F+ + KA PG + G+ + LAS+S +
Sbjct: 57 EEQIGKKLNHEELTQLRRERFAKRMESEKARPGVEAYLNAAKDLGLKIGLASSSDYKWVS 116
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ Q G + F VI +D+V KP+P+++L AAK L + P+ L EDSV G +A K
Sbjct: 117 GHLK-QIGLFDDFEVIQTADDVEEVKPNPELYLLAAKNLGVSPAECLAFEDSVNGSIAAK 175
Query: 183 AAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215
AGM+ V VP+ T + D + S+ ++
Sbjct: 176 RAGMKCVIVPNKVTGTLMFEDYDHRLESMAEME 208
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Bacillus subtilis (strain 168) (taxid: 224308) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 287 | ||||||
| 255567401 | 382 | riboflavin kinase/fmn adenylyltransferas | 0.885 | 0.664 | 0.748 | 1e-109 | |
| 297804002 | 380 | ATFMN [Arabidopsis lyrata subsp. lyrata] | 0.885 | 0.668 | 0.724 | 1e-106 | |
| 356521303 | 377 | PREDICTED: pseudouridine-5'-monophosphat | 0.867 | 0.660 | 0.742 | 1e-106 | |
| 359495472 | 388 | PREDICTED: pseudouridine-5'-monophosphat | 0.881 | 0.652 | 0.731 | 1e-106 | |
| 224066785 | 381 | predicted protein [Populus trichocarpa] | 0.888 | 0.669 | 0.730 | 1e-105 | |
| 359495493 | 388 | PREDICTED: pseudouridine-5'-monophosphat | 0.881 | 0.652 | 0.723 | 1e-105 | |
| 42567011 | 379 | riboflavin kinase [Arabidopsis thaliana] | 0.885 | 0.670 | 0.716 | 1e-104 | |
| 224082356 | 382 | predicted protein [Populus trichocarpa] | 0.891 | 0.670 | 0.718 | 1e-104 | |
| 357475891 | 377 | Riboflavin kinase [Medicago truncatula] | 0.867 | 0.660 | 0.730 | 1e-103 | |
| 388522333 | 377 | unknown [Medicago truncatula] | 0.867 | 0.660 | 0.726 | 1e-102 |
| >gi|255567401|ref|XP_002524680.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] gi|223536041|gb|EEF37699.1| riboflavin kinase/fmn adenylyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 190/254 (74%), Positives = 217/254 (85%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
MA PLKK +SCVILDLDGTLLNTDG+ S++LK FLVKYGK+WDGRE ++IVGKTP E AA
Sbjct: 3 MANPLKKFVSCVILDLDGTLLNTDGIVSDILKVFLVKYGKQWDGREGNRIVGKTPFEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF+ E+ MFSD CK+K LPGANRLIKH H VPMALASNS RA
Sbjct: 63 TIVEDYKLPCPTEEFIAEITPMFSDQWCKIKPLPGANRLIKHFIGHNVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IE+KIS GW ESFS+I+G DEV+ GKPSP+IFLEAA+RLN+EPSS LVIEDS+ GV+
Sbjct: 123 IEAKISCHEGWKESFSIIIGGDEVKAGKPSPEIFLEAARRLNIEPSSCLVIEDSLPGVMG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGMEVVAVPS+PKQ+H YTAADEVINSLLDL+PEKWGLP F+DW+EGTLP EPW+IG
Sbjct: 183 GKAAGMEVVAVPSIPKQSHLYTAADEVINSLLDLQPEKWGLPAFEDWVEGTLPVEPWHIG 242
Query: 241 GPVVKGLGRGSKLI 254
GPVVKG GRGSK++
Sbjct: 243 GPVVKGFGRGSKVL 256
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297804002|ref|XP_002869885.1| ATFMN [Arabidopsis lyrata subsp. lyrata] gi|297315721|gb|EFH46144.1| ATFMN [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 184/254 (72%), Positives = 214/254 (84%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV++DLDGTL+NTDG+ ++L+ +L KYGK+WDGRE KIVG+TPLE A
Sbjct: 3 MSNSLKKLTSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGQTPLEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDYGLPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYGLPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKIS+ GW E FSVIVGSDEV GKPSPDIFLEAAKRLN +P+ LVIEDSV GV+A
Sbjct: 123 IESKISHHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLNKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAG V+AVPSLPKQTH YT+ADEVINSLLD+RPEKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTNVIAVPSLPKQTHLYTSADEVINSLLDIRPEKWGLPPFQDWIENTLPIDPWHIG 242
Query: 241 GPVVKGLGRGSKLI 254
GPV+KG GRGSK++
Sbjct: 243 GPVIKGFGRGSKVL 256
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356521303|ref|XP_003529296.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/249 (74%), Positives = 209/249 (83%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
KKL+ CVILDLDGTLLNTDG+ VLK L KYGKEWDGRE KI+G TP E AA +V+D
Sbjct: 5 KKLIRCVILDLDGTLLNTDGIVGNVLKVMLGKYGKEWDGREAQKIIGTTPFEAAAAVVQD 64
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
Y LPC+ EF++E+ +FSD C +KALPGANRL+KHL HGVPMALASNS R +IE+KI
Sbjct: 65 YQLPCSAIEFLSEISPLFSDQWCNIKALPGANRLVKHLKSHGVPMALASNSPRESIEAKI 124
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
SY GW SFSVI+G DEVRTGKPSP+IFLEAA+RLNMEPSS LVIEDS+ GV AGK A
Sbjct: 125 SYHDGWKNSFSVIIGGDEVRTGKPSPEIFLEAARRLNMEPSSCLVIEDSLPGVTAGKTAE 184
Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245
MEVV VPSLPKQ+H YTAADEVINSLLDLR EKWGLPPF+DW+EGTLP +PWYIGGPVVK
Sbjct: 185 MEVVVVPSLPKQSHLYTAADEVINSLLDLRLEKWGLPPFEDWVEGTLPVDPWYIGGPVVK 244
Query: 246 GLGRGSKLI 254
G GRGSK++
Sbjct: 245 GFGRGSKVL 253
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495472|ref|XP_003634998.1| PREDICTED: pseudouridine-5'-monophosphatase-like [Vitis vinifera] gi|302144187|emb|CBI23314.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 389 bits (999), Expect = e-106, Method: Compositional matrix adjust.
Identities = 185/253 (73%), Positives = 218/253 (86%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 4 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL H VPMALASNS RA+I
Sbjct: 64 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHRVPMALASNSPRASI 123
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IFLEA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFLEASKRLSVKPSNCLVIEDSLPGVMAG 183
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGG 241
KAAGMEVVAVPS+PKQ+H + +ADEVINSLLDLRPE+WGLP FQDW+E TLP EPWYIGG
Sbjct: 184 KAAGMEVVAVPSIPKQSHIFNSADEVINSLLDLRPEQWGLPSFQDWVEDTLPVEPWYIGG 243
Query: 242 PVVKGLGRGSKLI 254
PV+KG GRGSK++
Sbjct: 244 PVIKGFGRGSKVL 256
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224066785|ref|XP_002302214.1| predicted protein [Populus trichocarpa] gi|222843940|gb|EEE81487.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 187/256 (73%), Positives = 217/256 (84%), Gaps = 1/256 (0%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
+A+PLKKL+S VILDLDGTLL+TDG+ S+VLK F+VKYGK+WDGRE KIVGKTPLE AA
Sbjct: 3 IAKPLKKLVSAVILDLDGTLLHTDGIVSDVLKVFVVKYGKQWDGRETQKIVGKTPLEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+VEDY LPC+ +F+ ++ + D C +KALPGANRLIKHLS H VPMALASNS RA
Sbjct: 63 AVVEDYELPCSTDDFLTQITPLLYDQWCSIKALPGANRLIKHLSSHNVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW SFSVI+ DEVRTGKPSP+IFLEAAKRLN++PSS LVIEDS+ GV
Sbjct: 123 IESKISYHQGWKGSFSVIIAGDEVRTGKPSPEIFLEAAKRLNVKPSSCLVIEDSLPGVTG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGMEVVAVPS+PK +H YT ADEVINSLLDL+PE WGLPPF+DW+EGTLP EPW+IG
Sbjct: 183 GKAAGMEVVAVPSIPK-SHLYTEADEVINSLLDLQPELWGLPPFEDWMEGTLPIEPWHIG 241
Query: 241 GPVVKGLGRGSKLICL 256
GPVVKG GRGSK++ +
Sbjct: 242 GPVVKGFGRGSKVLGI 257
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359495493|ref|XP_002271233.2| PREDICTED: pseudouridine-5'-monophosphatase [Vitis vinifera] gi|302144186|emb|CBI23313.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/253 (72%), Positives = 216/253 (85%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
A+PLKKL+S VILDLDGTLLNTDG+ SEVLK FLVKY K+W+G+ HK++GKTP E AA+
Sbjct: 4 AKPLKKLVSGVILDLDGTLLNTDGIVSEVLKVFLVKYEKQWNGKVAHKLIGKTPFEAAAV 63
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
IVEDYGLPC E ++E+ MFS+ C +KALPGANRLIKHL HGVP+ALASNS RA+I
Sbjct: 64 IVEDYGLPCTTEELMSEITPMFSNQWCNIKALPGANRLIKHLHGHGVPIALASNSPRASI 123
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
ESKIS GW ESFSVI+G DEVR GKPSP+IF EA+KRL+++PS+ LVIEDS+ GV+AG
Sbjct: 124 ESKISCHQGWKESFSVIIGGDEVRMGKPSPEIFFEASKRLSVKPSNCLVIEDSLPGVMAG 183
Query: 182 KAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGG 241
KAAGMEVVAVPS+P Q+H + +ADEVINSLLDLRPE WGLP FQDW+E TLP EPWYIGG
Sbjct: 184 KAAGMEVVAVPSIPNQSHIFNSADEVINSLLDLRPELWGLPSFQDWVEDTLPVEPWYIGG 243
Query: 242 PVVKGLGRGSKLI 254
PV+KG GRGSK++
Sbjct: 244 PVIKGFGRGSKVL 256
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|42567011|ref|NP_193878.2| riboflavin kinase [Arabidopsis thaliana] gi|30102526|gb|AAP21181.1| At4g21470 [Arabidopsis thaliana] gi|62752481|gb|AAX98488.1| riboflavin kinase/FMN hydrolase [Arabidopsis thaliana] gi|110742726|dbj|BAE99274.1| hypothetical protein [Arabidopsis thaliana] gi|332659057|gb|AEE84457.1| riboflavin kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 182/254 (71%), Positives = 212/254 (83%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV++DLDGTL+NTDG+ ++L+ +L KYGK+WDGRE KIVGKTP+E A
Sbjct: 3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW E FSVIVGSDEV GKPSPDIFLEAAKRL +P+ LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242
Query: 241 GPVVKGLGRGSKLI 254
GPV+KG GRGSK++
Sbjct: 243 GPVIKGFGRGSKVL 256
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224082356|ref|XP_002306660.1| predicted protein [Populus trichocarpa] gi|222856109|gb|EEE93656.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/256 (71%), Positives = 213/256 (83%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
+A+PLKK ++ VILDLDGTL++TDG+ +VLK L+KYGK+WDGRE KIVGKTPLEEAA
Sbjct: 3 IAKPLKKAVAAVILDLDGTLIHTDGILGDVLKALLLKYGKQWDGREAQKIVGKTPLEEAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
I+V DY LPC+ EFV ++ + D C +KALPGANRLIKHLS H VP+ALASNS RA
Sbjct: 63 IVVGDYELPCSIDEFVTQITPLLYDQFCNIKALPGANRLIKHLSGHNVPLALASNSPRAY 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISYQ GW ESFSVI+ DEVR GKPSP+IFLEAAKRLN+EPS LVIEDS+ GV
Sbjct: 123 IESKISYQQGWKESFSVIIAGDEVRAGKPSPEIFLEAAKRLNIEPSRCLVIEDSLPGVTG 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAA MEVVAVPS+PKQTH Y AADEVI+SLLDL+PE WGLPPF DWI+GTLP E W+IG
Sbjct: 183 GKAADMEVVAVPSIPKQTHLYIAADEVISSLLDLQPELWGLPPFDDWIDGTLPLEIWHIG 242
Query: 241 GPVVKGLGRGSKLICL 256
GPVVKG GRGSK++ +
Sbjct: 243 GPVVKGFGRGSKVLGI 258
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357475891|ref|XP_003608231.1| Riboflavin kinase [Medicago truncatula] gi|217072412|gb|ACJ84566.1| unknown [Medicago truncatula] gi|355509286|gb|AES90428.1| Riboflavin kinase [Medicago truncatula] gi|388509552|gb|AFK42842.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/249 (73%), Positives = 210/249 (84%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
++L+ CVILDLDGTLLNTDG+ VLK L KYGKEWDGRE KIVGKTPLE A+ +VED
Sbjct: 5 RRLIKCVILDLDGTLLNTDGIVCNVLKVSLGKYGKEWDGRETLKIVGKTPLEAASAVVED 64
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
YGLPC+ EFV+E+ FSD C +KALPGANRLIKHL +GVPMALASNS R +I++KI
Sbjct: 65 YGLPCSPIEFVSELSPQFSDQWCNIKALPGANRLIKHLKSNGVPMALASNSPRESIDAKI 124
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
S+ GW +SFSVI+G DEVRTGKPSPDIF EAA+RL +EPSS LVIEDS+ GV AGKAA
Sbjct: 125 SFHDGWKDSFSVIIGGDEVRTGKPSPDIFFEAARRLKIEPSSCLVIEDSLPGVTAGKAAE 184
Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245
MEVVAVPSLPKQ+H +TAADEVINSLLDL+ EKWGLPPF DW+E TLP +PWYIGGPV+K
Sbjct: 185 MEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFADWVERTLPVDPWYIGGPVIK 244
Query: 246 GLGRGSKLI 254
G GRGSK++
Sbjct: 245 GFGRGSKVL 253
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|388522333|gb|AFK49228.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/249 (72%), Positives = 209/249 (83%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
++L+ CVILDLDGTLLNTDG+ VLK L KYGKEWDGRE KIVGKTPLE A+ +VED
Sbjct: 5 RRLIKCVILDLDGTLLNTDGIVCNVLKVSLGKYGKEWDGRETLKIVGKTPLEAASAVVED 64
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
YGLPC+ EFV+E+ FSD C +KALPGANRLIKHL +GVPMALASNS R +I++KI
Sbjct: 65 YGLPCSPIEFVSELSPQFSDQWCNIKALPGANRLIKHLKSNGVPMALASNSPRESIDAKI 124
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
S+ GW +SFSV+ G DEVRTGKPSPDIF EAA+RL +EPSS LVIEDS+ GV AGKAA
Sbjct: 125 SFHDGWKDSFSVLFGGDEVRTGKPSPDIFFEAARRLKIEPSSCLVIEDSLPGVTAGKAAE 184
Query: 186 MEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVK 245
MEVVAVPSLPKQ+H +TAADEVINSLLDL+ EKWGLPPF DW+E TLP +PWYIGGPV+K
Sbjct: 185 MEVVAVPSLPKQSHLFTAADEVINSLLDLQLEKWGLPPFADWVERTLPVDPWYIGGPVIK 244
Query: 246 GLGRGSKLI 254
G GRGSK++
Sbjct: 245 GFGRGSKVL 253
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 287 | ||||||
| TAIR|locus:2119647 | 379 | FMN/FHY "riboflavin kinase/FMN | 0.885 | 0.670 | 0.677 | 1.7e-91 | |
| TAIR|locus:2174567 | 240 | GS1 [Arabidopsis thaliana (tax | 0.686 | 0.820 | 0.395 | 1.3e-31 | |
| UNIPROTKB|E2R8L4 | 233 | HDHD1 "Uncharacterized protein | 0.693 | 0.854 | 0.384 | 2.3e-30 | |
| TAIR|locus:2117512 | 298 | GPP1 "glycerol-3-phosphatase 1 | 0.686 | 0.661 | 0.376 | 3e-30 | |
| UNIPROTKB|Q08623 | 228 | HDHD1 "Pseudouridine-5'-monoph | 0.696 | 0.877 | 0.392 | 7.9e-30 | |
| UNIPROTKB|Q2KJ86 | 231 | HDHD1A "Haloacid dehalogenase- | 0.693 | 0.861 | 0.369 | 1.7e-27 | |
| MGI|MGI:1914615 | 234 | Hdhd1a "haloacid dehalogenase- | 0.700 | 0.858 | 0.375 | 1.7e-27 | |
| FB|FBgn0019982 | 231 | Gs1l "GS1-like" [Drosophila me | 0.756 | 0.939 | 0.354 | 1.2e-26 | |
| UNIPROTKB|E1BRK1 | 214 | HDHD1 "Uncharacterized protein | 0.693 | 0.929 | 0.344 | 3.2e-26 | |
| RGD|1305101 | 234 | Hdhd1 "haloacid dehalogenase-l | 0.700 | 0.858 | 0.356 | 4e-26 |
| TAIR|locus:2119647 FMN/FHY "riboflavin kinase/FMN hydrolase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 912 (326.1 bits), Expect = 1.7e-91, P = 1.7e-91
Identities = 172/254 (67%), Positives = 200/254 (78%)
Query: 1 MAQPLKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M+ LKKL SCV+ + ++L+ +L KYGK+WDGRE KIVGKTP+E A
Sbjct: 3 MSNSLKKLSSCVLIDLDGTLINTDGVVGDILRKYLCKYGKQWDGRESLKIVGKTPVEAAT 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
IVEDY LPC EF +E Y +FS + K+K+LPGANRLI+HL CHGVP+ALASNS RA
Sbjct: 63 TIVEDYELPCKVDEFNSEFYPLFSAQMDKIKSLPGANRLIRHLKCHGVPVALASNSSRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IESKISY GW E FSVIVGSDEV GKPSPDIFLEAAKRL +P+ LVIEDSV GV+A
Sbjct: 123 IESKISYHEGWKECFSVIVGSDEVSKGKPSPDIFLEAAKRLKKDPADCLVIEDSVPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAG +V+AVPSLPKQTH YT+ADEVINSLLD+R EKWGLPPFQDWIE TLP +PW+IG
Sbjct: 183 GKAAGTKVIAVPSLPKQTHLYTSADEVINSLLDIRLEKWGLPPFQDWIENTLPIDPWHIG 242
Query: 241 GPVVKGLGRGSKLI 254
GPV+KG GRGSK++
Sbjct: 243 GPVIKGFGRGSKVL 256
|
|
| TAIR|locus:2174567 GS1 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 83/210 (39%), Positives = 122/210 (58%)
Query: 27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVYSMFS 84
++EV + L ++ K++D K K++G+ +E A I VE+ G+ + +F+ E SM
Sbjct: 32 YTEVQEIILARFNKKFDWSLKAKMMGRKAIEAARIFVEESGISDSLSAEDFLVERESMLQ 91
Query: 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVG 140
D + +PGA+RLIKHL +P+ +A+ +H + K + +H E FS V+ G
Sbjct: 92 DLFPTSELMPGASRLIKHLHVKNIPICIATGTHTRHYDLK-TQRH--RELFSLMHHVVRG 148
Query: 141 SD-EVRTGKPSPDIFLEAAKRLNMEPSSS---LVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
D EV+ GKP+PD FL AA+R P S LV ED+ GV+A K AGM VV VP
Sbjct: 149 DDPEVKQGKPAPDGFLAAARRFKDGPVDSQKVLVFEDAPSGVLAAKNAGMNVVMVPDPRL 208
Query: 197 QTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
AD++I SL+D +PE+WGLPPF+D
Sbjct: 209 DISHQDVADQIITSLVDFKPEEWGLPPFED 238
|
|
| UNIPROTKB|E2R8L4 HDHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 78/203 (38%), Positives = 113/203 (55%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++S V + +YGK++ K ++GK E A I+++ LP +K E V+E +
Sbjct: 30 LYSVVFQEICDRYGKKYSWDVKSLVMGKKATEAAQIVIDVLQLPMSKEELVDESQMKLKE 89
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
+PG +LI HL HGVP+A+A++S + E K S + F +++G D E
Sbjct: 90 LFPTAALMPGVEKLIHHLREHGVPLAVATSSSLLSFEMKTSRHKEFFSLFDHIVLGDDPE 149
Query: 144 VRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP PDIFL AKR + P LV ED+ GV A AAGM+VV VP Q H
Sbjct: 150 VKNGKPDPDIFLACAKRFSPPPPMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLQRHLT 209
Query: 202 TAADEVINSLLDLRPEKWGLPPF 224
+ A V++SL D +PE +GLPP+
Sbjct: 210 SKATVVLDSLQDFQPELFGLPPY 232
|
|
| TAIR|locus:2117512 GPP1 "glycerol-3-phosphatase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 79/210 (37%), Positives = 120/210 (57%)
Query: 27 FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKHEFVNEVYSMFS 84
++EV + L +Y K +D K K++G+ +E A + V++ G+ + +F+ E SM
Sbjct: 89 YTEVQEKILARYNKTFDWSLKAKMMGRKAIEAARLFVDESGISDSLSAEDFIVERESMLQ 148
Query: 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVG 140
D +PGA+RL++HL G+P+ +A+ +H + K + +H E FS V+ G
Sbjct: 149 DLFPTSDLMPGASRLLRHLHGKGIPICIATGTHTRHFDLK-TQRH--RELFSLMHHVVRG 205
Query: 141 SD-EVRTGKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196
D EV+ GKP+PD FL A++R ++P LV ED+ GV A K AGM V+ VP
Sbjct: 206 DDPEVKEGKPAPDGFLAASRRFEDGPVDPRKVLVFEDAPSGVQAAKNAGMNVIMVPDSRL 265
Query: 197 QTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
AD+V+ SLLD +PE+WGLP FQD
Sbjct: 266 DKSYCNVADQVLASLLDFKPEEWGLPSFQD 295
|
|
| UNIPROTKB|Q08623 HDHD1 "Pseudouridine-5'-monophosphatase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 80/204 (39%), Positives = 114/204 (55%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++S V + +Y K++ K ++GK LE A II++ LP +K E V E + +
Sbjct: 25 LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 84
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
+PGA +LI HL HG+P ALA++S A+ + K S + FS +++G D E
Sbjct: 85 VFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLGDDPE 144
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP PDIFL AKR + P+ LV ED+ GV A AAGM+VV VP
Sbjct: 145 VQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLT 204
Query: 202 TAADEVINSLLDLRPEKWGLPPFQ 225
T A V+NSL D +PE +GLP ++
Sbjct: 205 TKATLVLNSLQDFQPELFGLPSYE 228
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| UNIPROTKB|Q2KJ86 HDHD1A "Haloacid dehalogenase-like hydrolase domain containing 1A" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 75/203 (36%), Positives = 113/203 (55%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++S V + +YGK++ K ++GK LE A +I + LP + E V + +
Sbjct: 28 LYSAVFEDICGRYGKKYSWDVKSLVMGKKALEAAQLIRDTLQLPMSAEELVEVSQAKLKE 87
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSD-E 143
+PG +LI+HL H VP A+A++S A+ + K S +Q + V++G D E
Sbjct: 88 VFPTAALMPGVEKLIRHLRKHDVPCAVATSSGTASFQLKTSRHQDFFGLFHHVVLGDDPE 147
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
VR+GKP PDIFL A+R + P ++ LV ED+ GV A AAGM+VV VP +
Sbjct: 148 VRSGKPEPDIFLTCARRFSPAPPANKCLVFEDAPNGVEAALAAGMQVVMVPDGNLKPDLT 207
Query: 202 TAADEVINSLLDLRPEKWGLPPF 224
+ A V+ SL D +PE +GLPP+
Sbjct: 208 SKATLVLGSLQDFQPELFGLPPY 230
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| MGI|MGI:1914615 Hdhd1a "haloacid dehalogenase-like hydrolase domain containing 1A" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 77/205 (37%), Positives = 109/205 (53%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++++V + +YGK+++ K ++GK LE A IVE LP +K E + E
Sbjct: 30 LYTDVFEEICNRYGKKYNWDVKSLVMGKKALETAQTIVEFLNLPISKEELLKESQEKLQM 89
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
L +PGA LI HL H +P ALA++S T ++K S G+ F +++G D E
Sbjct: 90 VLHTAGFMPGAEELIHHLKKHRLPFALATSSETVTFQTKTSRHTGFFGLFHHIVLGDDPE 149
Query: 144 VRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP DIFL AKR + +P LV EDS GV A GM+VV VP
Sbjct: 150 VKNGKPGMDIFLTCAKRFSPPPDPKDCLVFEDSPNGVEAAIHCGMQVVMVPHENLSADLT 209
Query: 202 TAADEVINSLLDLRPEKWGLPPFQD 226
A V++SL D +PE +GLP F +
Sbjct: 210 RKATLVLSSLHDFKPELFGLPAFTE 234
|
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| FB|FBgn0019982 Gs1l "GS1-like" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 82/231 (35%), Positives = 122/231 (52%)
Query: 5 LKKLMSCVIXXXXXXXXXXXXMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
L+K+ CV +++ + L YGK + K +++G A +VE
Sbjct: 6 LRKVTHCVFDMDGLLLDTER-LYTVATEMILEPYGKTYPFEIKEQVMGLQTEPLARFMVE 64
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
Y LP + E+ + + + + +PGA RL++HL + VP LA++S +E K
Sbjct: 65 HYELPMSWEEYARQQRANTEILMRNAQLMPGAERLLRHLHANKVPFCLATSSGADMVELK 124
Query: 125 ISYQHGWNESFSV----IVGSD--EVRTGKPSPDIFLEAAKRLNM--EPSSSLVIEDSVI 176
+ QH E FS+ + GS EV GKP+PDIFL AA R + +PS LV EDS
Sbjct: 125 TA-QH--RELFSLFNHKVCGSSDKEVVNGKPAPDIFLVAAGRFGVPPKPSDCLVFEDSPN 181
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTA-ADEVINSLLDLRPEKWGLPPFQD 226
GV A +AGM+VV VP P+ + T+ A +V+ SL D +PE++GLP F D
Sbjct: 182 GVTAANSAGMQVVMVPD-PRLSQEKTSHATQVLASLADFKPEQFGLPAFTD 231
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| UNIPROTKB|E1BRK1 HDHD1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 70/203 (34%), Positives = 110/203 (54%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
+++ V + ++GK + K ++GK LE A II + LP K E ++E
Sbjct: 11 LYTLVFEEICGRFGKSYTWDVKSLVMGKKALEGAQIIRDVLDLPITKEELLHESKMKQEK 70
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-YQHGWNESFSVIVGSD-E 143
+ +PG N+LI+HL H +P+A+A++S T + K S ++ +N +++G D E
Sbjct: 71 IFHTAELMPGVNKLIQHLHKHNIPIAVATSSAEVTFQMKTSRHKDFFNLFHHIVLGDDPE 130
Query: 144 VRTGKPSPDIFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V+ GKP PD FL AKR + P LV EDS +GV AAGM+VV +P +
Sbjct: 131 VKGGKPQPDAFLVCAKRFHPPAPPEKCLVFEDSPLGVKGALAAGMQVVMIPDENLSPNLK 190
Query: 202 TAADEVINSLLDLRPEKWGLPPF 224
A ++NS+ D +PE +GLP +
Sbjct: 191 KEATLLLNSMEDFKPELFGLPAY 213
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| RGD|1305101 Hdhd1 "haloacid dehalogenase-like hydrolase domain containing 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 73/205 (35%), Positives = 111/205 (54%)
Query: 26 MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85
++++V + +YGK+++ K ++GK E IIV+ LP +K + + E
Sbjct: 30 LYTDVFQAICSRYGKKYNWDVKSLVMGKKAPETTQIIVDFLKLPISKEQLLEESQERLQK 89
Query: 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSD-E 143
L +PGA LI HL + +P ALA++S + ++K S G+ F +++G D E
Sbjct: 90 VLHTAALMPGAEELIHHLRKNRLPFALATSSATLSFQTKTSRYKGFFSLFHHIVLGDDPE 149
Query: 144 VRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
V KP+PDIFL AKR + P+ LV EDS GV A A GM+VV VP +
Sbjct: 150 VINSKPAPDIFLTCAKRFSPPPNPEDCLVFEDSPNGVEAAVACGMQVVMVPHENLSSDLT 209
Query: 202 TAADEVINSLLDLRPEKWGLPPFQD 226
T A V++SL + +PE +GLP F +
Sbjct: 210 TKATLVLSSLHEFKPELFGLPAFDE 234
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 3.1.3 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | scaffold_702270.1 | annotation not avaliable (380 aa) | |||||||||
(Arabidopsis lyrata) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | Al_scaffold_0003_1112 | annotation not avaliable (365 aa) | • | • | 0.494 | ||||||
 | fgenesh2_kg.4__2352__AT2G42070.1 | annotation not avaliable (283 aa) | • | 0.440 | |||||||
 | fgenesh2_kg.3__3604__AT2G20690.1 | annotation not avaliable (268 aa) | • | 0.414 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 287 | |||
| PLN02940 | 382 | PLN02940, PLN02940, riboflavin kinase | 1e-163 | |
| PLN02811 | 220 | PLN02811, PLN02811, hydrolase | 1e-58 | |
| COG0637 | 221 | COG0637, COG0637, Predicted phosphatase/phosphohex | 6e-40 | |
| TIGR02009 | 185 | TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase f | 2e-29 | |
| TIGR01990 | 185 | TIGR01990, bPGM, beta-phosphoglucomutase | 3e-26 | |
| COG0546 | 220 | COG0546, Gph, Predicted phosphatases [General func | 5e-26 | |
| pfam13419 | 176 | pfam13419, HAD_2, Haloacid dehalogenase-like hydro | 1e-24 | |
| TIGR01509 | 177 | TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase sup | 1e-24 | |
| COG1011 | 229 | COG1011, COG1011, Predicted hydrolase (HAD superfa | 3e-19 | |
| PRK10725 | 188 | PRK10725, PRK10725, fructose-1-P/6-phosphogluconat | 7e-19 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-18 | |
| PLN02779 | 286 | PLN02779, PLN02779, haloacid dehalogenase-like hyd | 4e-17 | |
| PRK10826 | 222 | PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; | 9e-17 | |
| PRK13222 | 226 | PRK13222, PRK13222, phosphoglycolate phosphatase; | 4e-16 | |
| PRK11587 | 218 | PRK11587, PRK11587, putative phosphatase; Provisio | 8e-16 | |
| PLN02919 | 1057 | PLN02919, PLN02919, haloacid dehalogenase-like hyd | 5e-15 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 5e-15 | |
| TIGR01454 | 205 | TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic | 2e-14 | |
| PLN02770 | 248 | PLN02770, PLN02770, haloacid dehalogenase-like hyd | 2e-13 | |
| TIGR01449 | 213 | TIGR01449, PGP_bact, 2-phosphoglycolate phosphatas | 3e-13 | |
| PLN02575 | 381 | PLN02575, PLN02575, haloacid dehalogenase-like hyd | 2e-12 | |
| PLN03243 | 260 | PLN03243, PLN03243, haloacid dehalogenase-like hyd | 6e-12 | |
| pfam13242 | 74 | pfam13242, Hydrolase_like, HAD-hyrolase-like | 1e-11 | |
| TIGR02253 | 221 | TIGR02253, CTE7, HAD superfamily (subfamily IA) hy | 2e-11 | |
| PRK13288 | 214 | PRK13288, PRK13288, pyrophosphatase PpaX; Provisio | 9e-11 | |
| PRK10563 | 221 | PRK10563, PRK10563, 6-phosphogluconate phosphatase | 9e-11 | |
| TIGR01549 | 162 | TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase sup | 2e-10 | |
| TIGR03351 | 220 | TIGR03351, PhnX-like, phosphonatase-like hydrolase | 1e-09 | |
| PRK13223 | 272 | PRK13223, PRK13223, phosphoglycolate phosphatase; | 2e-09 | |
| TIGR02252 | 203 | TIGR02252, DREG-2, REG-2-like, HAD superfamily (su | 6e-08 | |
| PRK13226 | 229 | PRK13226, PRK13226, phosphoglycolate phosphatase; | 5e-07 | |
| TIGR00213 | 176 | TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate | 6e-06 | |
| TIGR01656 | 147 | TIGR01656, Histidinol-ppas, histidinol-phosphate p | 5e-05 | |
| TIGR01422 | 253 | TIGR01422, phosphonatase, phosphonoacetaldehyde hy | 5e-05 | |
| COG0241 | 181 | COG0241, HisB, Histidinol phosphatase and related | 2e-04 | |
| TIGR01458 | 257 | TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfam | 4e-04 | |
| COG0647 | 269 | COG0647, NagD, Predicted sugar phosphatases of the | 5e-04 | |
| PRK13225 | 273 | PRK13225, PRK13225, phosphoglycolate phosphatase; | 7e-04 | |
| PRK08942 | 181 | PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate p | 0.001 | |
| PRK13478 | 267 | PRK13478, PRK13478, phosphonoacetaldehyde hydrolas | 0.002 | |
| TIGR01993 | 183 | TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleoti | 0.002 | |
| TIGR02254 | 224 | TIGR02254, YjjG/YfnB, HAD superfamily (subfamily I | 0.003 |
| >gnl|CDD|178528 PLN02940, PLN02940, riboflavin kinase | Back alignment and domain information |
|---|
Score = 456 bits (1176), Expect = e-163
Identities = 194/254 (76%), Positives = 220/254 (86%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
A+PLKKL+S VILDLDGTLLNTDG+ S+VLK FLVKYGK+WDGRE KIVGKTPLE AA
Sbjct: 3 AAKPLKKLVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAA 62
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+VEDYGLPC+ EF +E+ + S+ C +KALPGANRLIKHL HGVPMALASNS RA
Sbjct: 63 TVVEDYGLPCSTDEFNSEITPLLSEQWCNIKALPGANRLIKHLKSHGVPMALASNSPRAN 122
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
IE+KIS GW ESFSVIVG DEV GKPSPDIFLEAAKRLN+EPS+ LVIEDS+ GV+A
Sbjct: 123 IEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMA 182
Query: 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIG 240
GKAAGMEV+AVPS+PKQTH Y++ADEVINSLLDL+PEKWGLPPF DWIEGTLP EPW+IG
Sbjct: 183 GKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIG 242
Query: 241 GPVVKGLGRGSKLI 254
GPV+KG GRGSK++
Sbjct: 243 GPVIKGFGRGSKVL 256
|
Length = 382 |
| >gnl|CDD|178407 PLN02811, PLN02811, hydrolase | Back alignment and domain information |
|---|
Score = 186 bits (474), Expect = 1e-58
Identities = 96/223 (43%), Positives = 135/223 (60%), Gaps = 17/223 (7%)
Query: 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP--CAKH 73
+DG LL+T+ ++EV + L +YGK +D K K++GK +E A I VE+ GL +
Sbjct: 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPE 60
Query: 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133
+F+ E +M D +PGA RL++HL G+P+A+A+ SH+ + K +HG E
Sbjct: 61 DFLVEREAMLQDLFPTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQ-RHG--E 117
Query: 134 SFS----VIVGSD-EVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG 185
FS V+ G D EV+ GKP+PDIFL AA+R ++P LV ED+ GV A K AG
Sbjct: 118 LFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAG 177
Query: 186 MEVVAVP--SLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQD 226
M VV VP L K + AD+V++SLLD +PE+WGLPPF D
Sbjct: 178 MSVVMVPDPRLDKSYCK--GADQVLSSLLDFKPEEWGLPPFPD 218
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Length = 220 |
| >gnl|CDD|223710 COG0637, COG0637, Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Score = 138 bits (349), Expect = 6e-40
Identities = 67/209 (32%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDY-GLP 69
VI D+DGTL++++ + + L +YG E E ++ G ++ + G
Sbjct: 4 AVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGED 63
Query: 70 CAKHEFV-NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
A + +Y + L +K +PG L++ L G+P+A+AS+S R E ++ +
Sbjct: 64 PADLAELERLLYEAEALELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAE-RVLAR 122
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G + F VIV +D+V GKP+PDI+L AA+RL ++P +V+EDS G+ A KAAGM V
Sbjct: 123 LGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182
Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRPE 217
V VP+ + H +++L E
Sbjct: 183 VGVPAGHDRPHLDPLDAHGADTVLLDLAE 211
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Length = 221 |
| >gnl|CDD|213673 TIGR02009, PGMB-YQAB-SF, beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-29
Identities = 63/187 (33%), Positives = 95/187 (50%), Gaps = 12/187 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI D+DG + +T + ++ K KYG +D + + G + + I++ G +
Sbjct: 4 VIFDMDGVITDTAPLHAQAWKHIAAKYGISFDKQYNESLKGLSREDILRAILKLRGDGLS 63
Query: 72 ---KH---EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
H E NE+Y L V LPG L+K L G+ + L S+S A I +K
Sbjct: 64 LEEIHQLAERKNELYRE-LLRLTGVAVLPGIRNLLKRLKAKGIAVGLGSSSKNAPRILAK 122
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ G + F IV + EV+ GKP P+ FL AA+ L + P+ +V ED++ GV A +AA
Sbjct: 123 L----GLRDYFDAIVDASEVKNGKPHPETFLLAAELLGVPPNECIVFEDALAGVQAARAA 178
Query: 185 GMEVVAV 191
GM VAV
Sbjct: 179 GMFAVAV 185
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This subfamily model groups together three clades: the characterized beta-phosphoglucomutases (including those from E.coli, B.subtilus and L.lactis, TIGR01990), a clade of putative bPGM's from mycobacteria and a clade including the uncharacterized E.coli and H.influenzae yqaB genes which may prove to be beta-mutases of a related 1-phosphosugar. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). Length = 185 |
| >gnl|CDD|213672 TIGR01990, bPGM, beta-phosphoglucomutase | Back alignment and domain information |
|---|
Score = 101 bits (253), Expect = 3e-26
Identities = 60/187 (32%), Positives = 85/187 (45%), Gaps = 11/187 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI DLDG + +T K + G +D + G + E I++ G +
Sbjct: 2 VIFDLDGVITDTAEYHYLAWKHLADELGIPFDEEFNESLKGVSREESLERILDLGGKKYS 61
Query: 72 KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-TIESK 124
+ E N+ Y L LPG L+ L + + +ALAS S A TI K
Sbjct: 62 EEEKEELAERKNDYYVELLKELTPADVLPGIKSLLADLKKNNIKIALASASKNAPTILEK 121
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ + F IV E++ GKP P+IFL AA+ L + PS + IED+ G+ A KAA
Sbjct: 122 L----ELIDYFDAIVDPAELKKGKPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAA 177
Query: 185 GMEVVAV 191
GM V V
Sbjct: 178 GMFAVGV 184
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This model represents the beta-phosphoglucomutase enzyme which catalyzes the interconverison of beta-D-glucose-1-phosphate and beta-D-glucose-6-phosphate. The 6-phosphate is capable of non-enzymatic anomerization (alpha <-> beta) while the 1-phosphate is not. A separate enzyme is responsible for the isomerization of the alpha anomers. Beta-D-glucose-1-phosphate results from the phosphorylysis of maltose (2.4.1.8), trehalose (2.4.1.64) or trehalose-6-phosphate (2.4.1.216). Alternatively, these reactions can be run in the synthetic direction to create the disaccharides. All sequenced genomes which contain a member of this family also appear to contain at least one putative maltose or trehalose phosphorylase. Three species, Lactococcus, Enterococcus and Neisseria appear to contain a pair of paralogous beta-PGM's. Beta-phosphoglucomutase is a member of the haloacid dehalogenase superfamily of hydrolase enzymes. These enzymes are characterized by a series of three catalytic motifs positioned within an alpha-beta (Rossman) fold. beta-PGM contains an inserted alpha helical domain in between the first and second conserved motifs and thus is a member of subfamily IA of the superfamily. The third catalytic motif comes in three variants, the third of which, containing a conserved DD or ED, is the only one found here as well as in several other related enzymes (TIGR01509). The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 185 |
| >gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 5e-26
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 14/214 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
++ DLDGTL+++ L + G E+ + + L+E + A
Sbjct: 7 ILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEA 66
Query: 72 KHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
E V + F L + + PG L+ L G + + +N ++ +
Sbjct: 67 AAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELD-ILLKA 125
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G + F VIVG D+V KP P+ L ++L ++P +L++ DS+ ++A KAAG+
Sbjct: 126 LGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPA 185
Query: 189 VAV------PSLPKQTHRYTAADEVINSLLDLRP 216
V V Q AD VI+SL +L
Sbjct: 186 VGVTWGYNSREELAQAG----ADVVIDSLAELLA 215
|
Length = 220 |
| >gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 97.0 bits (242), Expect = 1e-24
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 8/182 (4%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
+I DLDGTL++ D + E L+ + G + E + G E A ++ ++ +
Sbjct: 1 IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60
Query: 71 A-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
E + E P L++ L GV + + SN R +E +
Sbjct: 61 DEILEALLEYNLESRLEP-----FPDVVELLRRLKAKGVKLVILSNGSREAVERLLEK-L 114
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
G + F + SD+V KP P+ + +RL + P L I+DS + A +AAG++ V
Sbjct: 115 GLLDLFDAVFTSDDVGARKPDPEAYERVLERLGLPPEEILFIDDSPEDLEAARAAGIKTV 174
Query: 190 AV 191
V
Sbjct: 175 HV 176
|
Length = 176 |
| >gnl|CDD|233443 TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Score = 97.1 bits (242), Expect = 1e-24
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 8/183 (4%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG L++T + + + + E + YG
Sbjct: 1 AVLFDLDGVLVDT----AHAIAKLVDRAEFPLVPDELGVSEVGSLELALRRWKAKYGRTM 56
Query: 71 AKHEFVNEVYSMFSDHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
+ + +F + L K +K LPG L++ L G +AL +NS RA + +
Sbjct: 57 SAEDAQLLYKQLFYEALEKEGLKPLPGVRALLEALRARGKKLALLTNSPRADAKLVLE-- 114
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G F V++ S +V GKP PDI+L+A K+L ++PS L ++DS G+ A KAAGM
Sbjct: 115 LGLRALFDVVIDSSDVGLGKPDPDIYLQALKKLGLKPSECLFVDDSPAGIDAAKAAGMHT 174
Query: 189 VAV 191
V V
Sbjct: 175 VLV 177
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 177 |
| >gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Score = 83.8 bits (207), Expect = 3e-19
Identities = 52/218 (23%), Positives = 87/218 (39%), Gaps = 17/218 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE---EAAIIVEDYGL 68
++ DLDGTLL+ D + + G E + LE +YGL
Sbjct: 7 ILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYGL 66
Query: 69 PCAK-----HEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ + + + + L + P A +K L + + +N R
Sbjct: 67 TLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELG-KKYKLGILTNGAR 125
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
E K+ Q G + F + S++V KP P+IF A ++L + P +L + DS+
Sbjct: 126 PHQERKLR-QLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDSLEND 184
Query: 179 VAG-KAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDL 214
+ G +A GM+ V + K A D I+SL +L
Sbjct: 185 ILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAEL 222
|
Length = 229 |
| >gnl|CDD|182679 PRK10725, PRK10725, fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 7e-19
Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 16/189 (8%)
Query: 13 ILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAK 72
I D+DGT+L+T+ + + L +YG ++D + + G A I+E
Sbjct: 9 IFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDP 68
Query: 73 HEFVNE----VYSMFSDHLCKVKALPGANRLIKHL-SCHG-VPMALASNSHRATIESKIS 126
H E V SM D V+ LP LI+ + + HG PMA+ + S A E+ +
Sbjct: 69 HALAREKTEAVKSMLLD---SVEPLP----LIEVVKAWHGRRPMAVGTGSESAIAEALL- 120
Query: 127 YQH-GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
H G F +V +D+V+ KP+PD FL A+ + ++P+ +V ED+ G+ A +AAG
Sbjct: 121 -AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAG 179
Query: 186 MEVVAVPSL 194
M+ V V L
Sbjct: 180 MDAVDVRLL 188
|
Length = 188 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 81.2 bits (200), Expect = 1e-18
Identities = 42/194 (21%), Positives = 68/194 (35%), Gaps = 24/194 (12%)
Query: 9 MSCVILDLDGTLLNTDG------MFSEVLKTFLVKY--------GKEWDGREKHKIVGKT 54
+ V+ DLDGTL + + E V KE +++ +
Sbjct: 1 IKAVVFDLDGTLTDGEPVVPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
E + V + + PGA +K L G+ +A+ +
Sbjct: 61 LAGEELLEELLRAGATVVAVLDLVVLGLIALTD---PLYPGAREALKELKEAGIKLAILT 117
Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRT---GKPSPDIFLEAAKRLNMEPSSSLVI 171
+R T + F +V +D GKP P IF A + L ++P L++
Sbjct: 118 GDNRLTANAIARLLG----LFDALVSADLYGLVGVGKPDPKIFELALEELGVKPEEVLMV 173
Query: 172 EDSVIGVVAGKAAG 185
D V + A KAAG
Sbjct: 174 GDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|215416 PLN02779, PLN02779, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 79.0 bits (195), Expect = 4e-17
Identities = 44/134 (32%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
Query: 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTG 147
+ PG RL+ G+ +A+ S S+ + ++ G + V G D+V
Sbjct: 143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG-DDVPKK 201
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
KP PDI+ AA+ L ++PS +V+EDSVIG+ A KAAGM + S ++ AD V
Sbjct: 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAV 261
Query: 208 INSLLDLRPEKWGL 221
+ L D+ E + L
Sbjct: 262 FDCLGDVPLEDFDL 275
|
Length = 286 |
| >gnl|CDD|236770 PRK10826, PRK10826, 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 9e-17
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
LPG + G+ + LAS S +E + + F + ++++ KP P
Sbjct: 93 LLPGVREALALCKAQGLKIGLASASPLHMLE-AVLTMFDLRDYFDALASAEKLPYSKPHP 151
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVIN 209
+++L A +L ++P + + +EDS G++A KAA M + VP+ P+Q + R+ AD +
Sbjct: 152 EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPA-PEQQNDPRWALADVKLE 210
Query: 210 SLLDLRPE 217
SL +L
Sbjct: 211 SLTELTAA 218
|
Length = 222 |
| >gnl|CDD|237310 PRK13222, PRK13222, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 75.2 bits (186), Expect = 4e-16
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 60/239 (25%)
Query: 12 VILDLDGTLLNT--------DGMFSEV---------LKTF-------LVKYGKEWDGREK 47
V DLDGTL+++ + + + ++T+ LV+ W GRE
Sbjct: 9 VAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGRE- 67
Query: 48 HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCH 106
+E L + F Y+ +++ L PG + L
Sbjct: 68 --------PDEEL-------LEKLRELFD-RHYA---ENVAGGSRLYPGVKETLAALKAA 108
Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
G P+A+ +N + + G + FSV++G D + KP P L A ++L ++P
Sbjct: 109 GYPLAVVTNKPTPFVA-PLLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167
Query: 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDLRPE 217
L + DS + A +AAG V V T+ Y D VI+ +L P
Sbjct: 168 EMLFVGDSRNDIQAARAAGCPSVGV------TYGYNYGEPIALSEPDVVIDHFAELLPL 220
|
Length = 226 |
| >gnl|CDD|183215 PRK11587, PRK11587, putative phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 74.3 bits (183), Expect = 8e-16
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 19/137 (13%)
Query: 90 VKALPGANRLIKHLSCHGVPMA--------LASNSHRATIESKISYQHGWNESFSVIVGS 141
+ ALPGA L+ HL+ G+P A +AS H+A G V V +
Sbjct: 82 ITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAA---------GLPAP-EVFVTA 131
Query: 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY 201
+ V+ GKP PD +L A+ L + P +V+ED+ GV++G AAG V+AV + P T R
Sbjct: 132 ERVKRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV-NAPADTPRL 190
Query: 202 TAADEVINSLLDLRPEK 218
D V++SL L K
Sbjct: 191 DEVDLVLHSLEQLTVTK 207
|
Length = 218 |
| >gnl|CDD|215497 PLN02919, PLN02919, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 74.9 bits (184), Expect = 5e-15
Identities = 39/98 (39%), Positives = 57/98 (58%)
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
PGA LI G+ +A+AS++ R +++ ++ F IV +D KP+PDI
Sbjct: 164 PGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDI 223
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
FL AAK L + S +VIED++ GV A +AAGM +AV
Sbjct: 224 FLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261
|
Length = 1057 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 70.1 bits (172), Expect = 5e-15
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 17/119 (14%)
Query: 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV---- 144
+++ PG +K L G+ +ALA+N R + + + G ++ F ++ S+
Sbjct: 22 ELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE-ELGLDDYFDPVITSNGAAIYY 80
Query: 145 ------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
GKP+PD L A K L ++P L++ DS+ + KAAG VAV
Sbjct: 81 PKEGLFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|130521 TIGR01454, AHBA_synth_RP, 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 2e-14
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 32/192 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------IV 63
V+ DLDG L+++ F+ + + F + Y +E G G P EE I+
Sbjct: 1 VVFDLDGVLVDS---FAVMREAFAIAY-REVVGD------GPAPFEEYRRHLGRYFPDIM 50
Query: 64 EDYGLPCAKHE-FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH----R 118
GLP E FV E Y + +V+ PG L+ L GV A+A+ R
Sbjct: 51 RIMGLPLEMEEPFVRESYRLAG----EVEVFPGVPELLAELRADGVGTAIATGKSGPRAR 106
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
+ +E+ G F ++GSDEV KP+PDI EA + L++ P ++++ D+V +
Sbjct: 107 SLLEAL-----GLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDL 161
Query: 179 VAGKAAGMEVVA 190
+ +AAG VA
Sbjct: 162 ASARAAGTATVA 173
|
The enzymes in this equivalog are all located in the operons for the biosynthesis of 3-amino-5-hydroxybenoic acid (AHBA), which is a precursor of several antibiotics including ansatrienin , naphthomycin , rifamycin and mitomycin. The role that this enzyme plays in this biosynthesis has not been elucidated. This enzyme is a member of the Haloacid dehalogenase superfamily (pfam00702) of aspartate-nucleophile hydrolases. This enzyme is closely related to phosphoglycolate phosphatase (TIGR01449), but it is unclear what purpose a PGPase or PGPase-like activity would serve in these biosyntheses. This model is limited to the Gram positive Actinobacteria. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. Length = 205 |
| >gnl|CDD|215413 PLN02770, PLN02770, haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 2e-13
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 19/194 (9%)
Query: 9 MSCVILDLDGTLLNTDGM----FSEVLKTFLVKYGKEWDGREK---HKIVGKTPLEEAAI 61
+ V+ D+DGTL ++D + F E+L+ G E+ I GK + A
Sbjct: 22 LEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPIT--EEFFVENIAGKHNEDIALG 79
Query: 62 IVED---YGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSH 117
+ D GL +F ++ ++F ++K L G +L K + G+ A +N+
Sbjct: 80 LFPDDLERGL-----KFTDDKEALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAP 134
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
R E IS G ++ F ++ E KP PD +L+A + L + + V EDSV G
Sbjct: 135 RENAELMISLL-GLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSG 193
Query: 178 VVAGKAAGMEVVAV 191
+ AG AAGM VV +
Sbjct: 194 IKAGVAAGMPVVGL 207
|
Length = 248 |
| >gnl|CDD|130516 TIGR01449, PGP_bact, 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Score = 67.2 bits (164), Expect = 3e-13
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
PG + L G+ + L +N + G + FSV++G D + KP
Sbjct: 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELL-GLAKYFSVLIGGDSLAQRKPH 143
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
PD L AA+RL + P + + DS + + A +AAG V +
Sbjct: 144 PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLL 184
|
PGP is an essential enzyme in the glycolate salvage pathway in higher organisms (photorespiration in plants). Phosphoglycolate results from the oxidase activity of RubisCO in the Calvin cycle when concentrations of carbon dioxide are low relative to oxygen. In Ralstonia (Alcaligenes) eutropha and Rhodobacter sphaeroides, the PGP gene (CbbZ) is located on an operon along with other Calvin cycle enzymes including RubisCO. The only other pertinent experimental evidence concerns the gene from E. coli. The in vitro activity of the Ralstonia and Escherichia enzymes was determined with crude cell extracts of strains containing PGP on expression plasmids and compared to controls. In E. coli, however, there does not appear to be a functional Calvin cycle (RubisCO is absent), although the E. coli PGP gene (gph) is on the same operon (dam) with ribulose-5-phosphate-3-epimerase (rpe), a gene in the pentose-phosphate pathway (along with other, unrelated genes). The E. coli enzyme is not expressed under normal laboratory conditions; the pathway to which it belongs has not been determined. In fact, the possibility exists, although unlikely, that the E. coli enzyme and others within this equivalog have as their physiological substrate another, closely related molecule. The other seed chosen for this model, from Xylella fastidiosa has no experimental evidence, but is a plant pathogen and thus may obtain phosphoglycolate from its host. This model has been restricted to encompass only proteobacteria as no related PGP has been verified outside of this clade. Sequences from Aquifex aeolicus and Treponema pallidum fall between the trusted and noise cutoffs. Just below the noise cutoff is a gene which is part of the operon for the biosynthesis of the blue pigment, indigoidine, from Erwinia (Pectobacterium) chrysanthemi, a plant pathogen. It does not seem likely, considering the proposed biosynthetic mechanism, that the dephosphorylation of phosphoglycolate or a closely related compound is required. Possibly, this gene is fortuitously located in this operon, or has an indirect relationship to the necessity for the biosynthesis of this compound. Sequences from 11 species have been annotated as PGP or putative PGP but fall below the noise cutoff. None of these have experimental validation. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702) [Energy metabolism, Sugars]. Length = 213 |
| >gnl|CDD|215313 PLN02575, PLN02575, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 66.4 bits (162), Expect = 2e-12
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Query: 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF 154
G+ + L + +PMAL S R T+E+ I G FSVIV +++V GKP P++F
Sbjct: 220 GSQEFVNVLMNYKIPMALVSTRPRKTLENAIG-SIGIRGFFSVIVAAEDVYRGKPDPEMF 278
Query: 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ AA+ LN P +V +S V A A M+ VAV S + AAD V+ L +L
Sbjct: 279 IYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYELGAADLVVRRLDEL 337
|
Length = 381 |
| >gnl|CDD|215644 PLN03243, PLN03243, haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 63.9 bits (155), Expect = 6e-12
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
+ PG+ ++ L H +P+A+AS R +E I G FSV++ +++V GKP
Sbjct: 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIE-AVGMEGFFSVVLAAEDVYRGKPD 167
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
P++F+ AA+RL P +V +S V A M+ VAV + +A D V+
Sbjct: 168 PEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRR 226
Query: 211 LLDL 214
L DL
Sbjct: 227 LDDL 230
|
Length = 260 |
| >gnl|CDD|222003 pfam13242, Hydrolase_like, HAD-hyrolase-like | Back alignment and domain information |
|---|
Score = 58.9 bits (143), Expect = 1e-11
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--- 203
GKP+P + A +RL ++P ++I DS ++A +AAG+ + V T TA
Sbjct: 3 GKPNPGMLRAALERLGVDPEECVMIGDSDTDILAARAAGIRTILVL-----TGVTTAEDL 57
Query: 204 ------ADEVINSLLDL 214
D V++SL DL
Sbjct: 58 ERAPGRPDYVVDSLADL 74
|
Length = 74 |
| >gnl|CDD|162787 TIGR02253, CTE7, HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 47/225 (20%), Positives = 88/225 (39%), Gaps = 31/225 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKT---FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
+ DLD TL++T G+ + + L++ G D E ++ + K ++++YG
Sbjct: 5 IFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLK--------LIKEYGS 56
Query: 69 PCAKH---------------EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
H VY+ ++ PG + L G + +
Sbjct: 57 NYPTHFDYLIRRLWEEYNPKLVAAFVYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGII 116
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173
++ K+ + G + F ++ S+E KP P IF A KRL ++P ++++ D
Sbjct: 117 TDGLPVKQWEKLE-RLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEEAVMVGD 175
Query: 174 SVI-GVVAGKAAGMEVVAVPSLPKQTHR---YTAADEVINSLLDL 214
+ + K GM+ V + Y D I+SL +L
Sbjct: 176 RLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220
|
This family of sequences from archaea and metazoans includes the human uncharacterized protein CTE7. Pyrococcus species appear to have three different forms of this enzyme, so it is unclear whether all members of this family have the same function. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Length = 221 |
| >gnl|CDD|237336 PRK13288, PRK13288, pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 9e-11
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK---TPLEEA-AIIVEDYG 67
V+ DLDGTL+NT+ + ++ +FL + + K + V L + + I E
Sbjct: 6 VLFDLDGTLINTNEL---IISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESK- 61
Query: 68 LPCAKHEFVNEVYSMFSD-----HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
V E+ + + + H V +K L G + + + R T+E
Sbjct: 62 --------VEEMITTYREFNHEHHDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVE 113
Query: 123 S--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
K++ G +E F V++ D+V KP P+ L+A + L +P +L++ D+ ++A
Sbjct: 114 MGLKLT---GLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILA 170
Query: 181 GKAAGMEVVAV 191
GK AG + V
Sbjct: 171 GKNAGTKTAGV 181
|
Length = 214 |
| >gnl|CDD|182552 PRK10563, PRK10563, 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 60.1 bits (146), Expect = 9e-11
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 21/188 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE-AAIIVEDYGLP 69
V D DGTL++++ + S T ++G E K L E II +++G+
Sbjct: 6 AVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVT 65
Query: 70 CAKHE----FVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
AK E + EV +F L + + GAN L++ ++ VPM + SN SK+
Sbjct: 66 LAKAELEPVYRAEVARLFDSEL---EPIAGANALLESIT---VPMCVVSNGP----VSKM 115
Query: 126 SYQHGWNESFS-----VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
+ G + G D ++ KP P + AA+ +N+ + ++++DS G +
Sbjct: 116 QHSLGKTGMLHYFPDKLFSGYD-IQRWKPDPALMFHAAEAMNVNVENCILVDDSSAGAQS 174
Query: 181 GKAAGMEV 188
G AAGMEV
Sbjct: 175 GIAAGMEV 182
|
Length = 221 |
| >gnl|CDD|233463 TIGR01549, HAD-SF-IA-v1, haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 2e-10
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 23/179 (12%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK--TPLEEAAIIVEDYGLP 69
++ D+DGTL++ E+ + L+ + E+
Sbjct: 2 ILFDIDGTLVDIKFAIRRAFAQTF----------EEFGLNPAAFKRLKALRGLAEE---- 47
Query: 70 CAKHEFVNEVYSMFSDHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS 126
E H+ + +PGA L+ L G+ + + SN + +
Sbjct: 48 -LLWRIATEALEELQGHIGYDAEEAYIPGAADLLPRLKEAGIKLGIISNGSLRAQKLLLR 106
Query: 127 YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
HG + F +I+GSDE+ + KP P+IFL A + L + P L + D++ + + AG
Sbjct: 107 K-HGLGDYFELILGSDEIGS-KPEPEIFLAALESLGVPP-EVLHVGDNLSDIKGARNAG 162
|
This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions.The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single representation is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)(D/E), (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 1 (this model) is found in the enzymes phosphoglycolate phosphatase (TIGR01449) and enolase-phosphatase. These three variant models (see also TIGR01493 and TIGR01509) were created withthe knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly relatedHAD subfamilies caused by an overly broad single model [Unknown function, Enzymes of unknown specificity]. Length = 162 |
| >gnl|CDD|234176 TIGR03351, PhnX-like, phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Score = 56.3 bits (136), Expect = 1e-09
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 30/199 (15%)
Query: 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYG---------KEWDGREKHKIV------GKT 54
S V+LD+ GT ++ DG+ L+ + G W G+ K + +
Sbjct: 2 SLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLAADGA 61
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
EA D+ E + D ALPGA + L G+ +AL +
Sbjct: 62 DEAEAQAAFADF----------EERLAEAYDDG-PPVALPGAEEAFRSLRSSGIKVALTT 110
Query: 115 NSHRATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVI 171
R T E ++ + GW + +V +V G+P+PD+ L A + ++ S V
Sbjct: 111 GFDRDTAE-RLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQDVQSVAVA 169
Query: 172 EDSVIGVVAGKAAGMEVVA 190
D+ + AG AG V
Sbjct: 170 GDTPNDLEAGINAGAGAVV 188
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the substrate is also, like Pald, a 2-oxo-ethylphosphonate. Despite this, the genomic context of members of this family are quite distinct from PhnX, which is almost invariably associated with the 2-aminoethylphosphonate transaminase PhnW (TIGR02326), the source of the substrate Pald. Members of this clade are never associated with PhnW, but rather associate with families of FAD-dependent oxidoreductases related to deaminating amino acid oxidases (pfam01266) as well as zinc-dependent dehydrogenases (pfam00107). Notably, family members from Arthrobacter aurescens TC1 and Nocardia farcinica IFM 10152 are adjacent to the PhnCDE ABC cassette phosphonates transporter (GenProp0236) typically found in association with the phosphonates C-P lyase system (GenProp0232). These observations suggest two possibilities. First, the substrate for this enzyme family is also Pald, the non-association with PhnW not withstanding. Alternatively, the substrate is something very closely related such as hydroxyphosphonoacetaldehyde (Hpald). Hpald could come from oxidative deamination of 1-hydroxy-2-aminoethylphosphonate (HAEP) by the associated oxidase. HAEP would not be a substrate for PhnW due to its high specificity for AEP. HAEP has been shown to be a constituent of the sphingophosphonolipid of Bacteriovorax stolpii, and presumably has other natural sources. If Hpald is the substrate, the product would be glycoaldehyde (hydroxyacetaldehyde), and the associated alcohol dehydrogenase may serve to convert this to glycol. Length = 220 |
| >gnl|CDD|171912 PRK13223, PRK13223, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 56.8 bits (137), Expect = 2e-09
Identities = 66/242 (27%), Positives = 93/242 (38%), Gaps = 57/242 (23%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK------------------- 47
+L V+ DLDGTL+++ + + L++ G+ G E
Sbjct: 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAG 70
Query: 48 ---HKIVGKTPLEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHL 103
H V E+A A+ +E Y HE VY PG +K L
Sbjct: 71 SIDHDGVDDELAEQALALFMEAYA---DSHEL-TVVY-------------PGVRDTLKWL 113
Query: 104 SCHGVPMALASNSHRATI-----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158
GV MAL +N + + KI W I+G D + KP P L
Sbjct: 114 KKQGVEMALITNKPERFVAPLLDQMKIGRYFRW------IIGGDTLPQKKPDPAALLFVM 167
Query: 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE----VINSLLDL 214
K + PS SL + DS V+A KAAG++ VA+ H A+E VI+ L L
Sbjct: 168 KMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSY--GYNHGRPIAEESPALVIDDLRAL 225
Query: 215 RP 216
P
Sbjct: 226 LP 227
|
Length = 272 |
| >gnl|CDD|200170 TIGR02252, DREG-2, REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Score = 51.5 bits (124), Expect = 6e-08
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKI 125
P + + E+YS F+ + P A +L+K L G+ + + SN R +E+
Sbjct: 84 PESFEKIFEELYSYFATPEP-WQVYPDAIKLLKDLRERGLILGVISNFDSRLRGLLEAL- 141
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI-GVVAGKAA 184
G E F +V S EV KP P IF EA +R + P +L I DS+ +AA
Sbjct: 142 ----GLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAA 197
Query: 185 GM 186
G
Sbjct: 198 GW 199
|
This family of proteins includes uncharacterized sequences from eukaryotes, cyanobacteria and Leptospira as well as the DREG-2 protein from Drosophila melanogaster which has been identified as a rhythmically (diurnally) regulated gene. This family is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called 'capping domain', or the absence of such a domain. This family is a member of subfamily 1A in which the cap domain consists of a predicted alpha helical bundle found in between the first and second catalytic motifs. A distinctive feature of this family is a conserved tandem pair of tryptophan residues in the cap domain. The most divergent sequences included within the scope of this model are from plants and have "FW" at this position instead. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. Length = 203 |
| >gnl|CDD|237311 PRK13226, PRK13226, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 49.5 bits (118), Expect = 5e-07
Identities = 22/64 (34%), Positives = 36/64 (56%)
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
Q GW + +V++G D + KP P L AA+R+ + P+ + + D ++A +AAGM
Sbjct: 131 QLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMP 190
Query: 188 VVAV 191
VA
Sbjct: 191 SVAA 194
|
Length = 229 |
| >gnl|CDD|129317 TIGR00213, GmhB_yaeD, D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 6e-06
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAAD 205
KP P + L+A K L+++ + S ++ D + + AG AA V+ P AD
Sbjct: 106 KPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIAD 165
Query: 206 EVINSLLDL 214
V+NSL DL
Sbjct: 166 WVLNSLADL 174
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PMID:11751812) [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. Length = 176 |
| >gnl|CDD|233512 TIGR01656, Histidinol-ppas, histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 5e-05
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193
KP P + LEA KRL ++ S SLV+ D + + A + AG+ V +
Sbjct: 101 KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVD 146
|
This domain is found in authentic histidinol-phosphate phosphatases which are sometimes found as stand-alone entities and sometimes as fusions with imidazoleglycerol-phosphate dehydratase (TIGR01261). Additionally, a family of proteins including YaeD from E. coli (TIGR00213) and various other proteins are closely related but may not have the same substrate specificity. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. Length = 147 |
| >gnl|CDD|188140 TIGR01422, phosphonatase, phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 5e-05
Identities = 26/101 (25%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNESFSVIVGSDEVRTGKPSP 151
PGA +I +L G+ + + R ++ + + G+ + V +D+V G+P+P
Sbjct: 102 PGAIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAAAQGYRPDY--NVTADDVPAGRPAP 159
Query: 152 DIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
+ L+ A L + +++V + D+V + G+ AGM V V
Sbjct: 160 WMALKNATELGVYDPAAVVKVGDTVPDIEEGRNAGMWTVGV 200
|
This enzyme catalyzes the cleavage of the carbon phosphorous bond of a phosphonate. The mechanism depends on the substrate having a carbonyl one carbon away from the cleavage position. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent [Central intermediary metabolism, Other]. Length = 253 |
| >gnl|CDD|223319 COG0241, HisB, Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 41.1 bits (97), Expect = 2e-04
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQTHRYTAADE 206
KP P + L A K N++ S S V+ D + + A + AG++ V+ + + T A
Sbjct: 105 KPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKW 164
Query: 207 VINSLLDL 214
V +SL +
Sbjct: 165 VFDSLAEF 172
|
Length = 181 |
| >gnl|CDD|162372 TIGR01458, HAD-SF-IIA-hyp3, HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 4e-04
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG-KAAGMEVVAVPSLPKQTHRYTAAD 205
GKPS FLEA + EP +++I D V G + GM + V +T +Y +D
Sbjct: 178 GKPSKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQV-----RTGKYRPSD 232
Query: 206 E 206
E
Sbjct: 233 E 233
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published [Unknown function, Enzymes of unknown specificity]. Length = 257 |
| >gnl|CDD|223720 COG0647, NagD, Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 5e-04
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAV 191
GKPSP I+ A ++L ++ S L++ D + ++ KAAG++ + V
Sbjct: 189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLV 234
|
Length = 269 |
| >gnl|CDD|106187 PRK13225, PRK13225, phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 40.1 bits (93), Expect = 7e-04
Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 30/201 (14%)
Query: 3 QPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------------KEWDGREKHKI 50
Q + + +I D DGTL+++ + +G ++W R +
Sbjct: 56 QSYPQTLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIVRR 115
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
G +P ++A ++ V D L ++ PG L+ L + +
Sbjct: 116 AGLSPWQQARLL--------------QRVQRQLGDCLPALQLFPGVADLLAQLRSRSLCL 161
Query: 111 ALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
+ S++ R IE+ + Q G FSV+ + + + + + R +P++ +
Sbjct: 162 GILSSNSRQNIEAFLQRQ-GLRSLFSVVQAGTPILSKRRA---LSQLVAREGWQPAAVMY 217
Query: 171 IEDSVIGVVAGKAAGMEVVAV 191
+ D V A + G+ VAV
Sbjct: 218 VGDETRDVEAARQVGLIAVAV 238
|
Length = 273 |
| >gnl|CDD|236354 PRK08942, PRK08942, D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Score = 39.0 bits (92), Expect = 0.001
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
KP P + L A+RLN++ + S ++ DS+ + A AAG
Sbjct: 103 KPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAG 140
|
Length = 181 |
| >gnl|CDD|184075 PRK13478, PRK13478, phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.002
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 137 VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV-IEDSVIGVVAGKAAGMEVVAV 191
+V +D+V G+P P + L+ A L + ++ V ++D+V G+ G AGM V V
Sbjct: 147 HVVTTDDVPAGRPYPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGV 202
|
Length = 267 |
| >gnl|CDD|233675 TIGR01993, Pyr-5-nucltdase, pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Score = 38.1 bits (89), Expect = 0.002
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
KPSP + +A + ++P ++ +DS + AGKA GM+ V V
Sbjct: 140 KPSPQAYEKALREAGVDPERAIFFDDSARNIAAGKALGMKTVLV 183
|
This family of proteins includes the SDT1/SSM1 gene from yeast which has been shown to code for a pyrimidine (UMP/CMP) 5'nucleotidase. The family spans plants, fungi and a small number of bacteria. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). Length = 183 |
| >gnl|CDD|162788 TIGR02254, YjjG/YfnB, HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Score = 37.9 bits (88), Expect = 0.003
Identities = 42/198 (21%), Positives = 79/198 (39%), Gaps = 26/198 (13%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE----------------WDGREKHKIVGKT- 54
++ DLD T+L+ + L+ G W E+ KI
Sbjct: 4 LLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEV 63
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALA 113
+ ++++Y A +N+ Y F + ++ LPGA L+++L + +
Sbjct: 64 VNTRFSALLKEYNTE-ADEALLNQKYLRFLEEGHQL--LPGAFELMENL--QQKFRLYIV 118
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
+N R T ++ + G F I S++ KP +IF A +R+ L+I
Sbjct: 119 TNGVRETQYKRLR-KSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIG 177
Query: 173 DSVIG-VVAGKAAGMEVV 189
DS+ + G+ AG++
Sbjct: 178 DSLTADIKGGQNAGLDTC 195
|
This family consists of uncharacterized proteobacterial and gram positive bacterial sequences including YjjG from E. coli and YfnB from B. subtilis. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. Length = 224 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 287 | |||
| PLN02940 | 382 | riboflavin kinase | 100.0 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 100.0 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 99.98 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 99.98 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 99.98 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 99.98 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 99.98 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 99.98 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 99.98 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 99.97 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 99.97 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 99.97 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 99.97 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 99.97 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 99.97 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 99.97 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 99.97 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 99.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 99.96 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 99.96 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 99.96 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 99.96 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 99.96 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 99.96 | |
| KOG2914 | 222 | consensus Predicted haloacid-halidohydrolase and r | 99.96 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 99.96 | |
| PLN02811 | 220 | hydrolase | 99.96 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 99.95 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 99.95 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 99.95 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 99.95 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 99.95 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 99.95 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 99.94 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 99.93 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 99.93 | |
| COG1011 | 229 | Predicted hydrolase (HAD superfamily) [General fun | 99.93 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 99.92 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 99.92 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 99.91 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 99.91 | |
| TIGR01493 | 175 | HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su | 99.9 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 99.9 | |
| KOG3085 | 237 | consensus Predicted hydrolase (HAD superfamily) [G | 99.89 | |
| PRK08238 | 479 | hypothetical protein; Validated | 99.88 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 99.87 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 99.87 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 99.87 | |
| PLN02954 | 224 | phosphoserine phosphatase | 99.86 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 99.86 | |
| PRK06769 | 173 | hypothetical protein; Validated | 99.85 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 99.85 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 99.85 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 99.82 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 99.82 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 99.81 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 99.81 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 99.8 | |
| KOG3109 | 244 | consensus Haloacid dehalogenase-like hydrolase [Ge | 99.79 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 99.79 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 99.76 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 99.76 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 99.76 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 99.72 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 99.72 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 99.72 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 99.71 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 99.7 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 99.7 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 99.7 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 99.69 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 99.69 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 99.68 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 99.68 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 99.67 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.66 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 99.65 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 99.64 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 99.64 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 99.63 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 99.62 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.6 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 99.59 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 99.58 | |
| COG4229 | 229 | Predicted enolase-phosphatase [Energy production a | 99.54 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.52 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 99.5 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 99.49 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 99.49 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 99.47 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 99.46 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.45 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 99.44 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 99.43 | |
| TIGR02244 | 343 | HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd | 99.41 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.4 | |
| PF13242 | 75 | Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY | 99.4 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 99.37 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.35 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 99.33 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 99.32 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.3 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 99.28 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.26 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.25 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 99.24 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 99.24 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 99.24 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.23 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.2 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.18 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 99.17 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 99.15 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 99.13 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 99.12 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 99.09 | |
| PLN02887 | 580 | hydrolase family protein | 99.09 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 99.08 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.06 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 99.06 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.05 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 99.04 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 99.03 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.01 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.01 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.98 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 98.95 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 98.93 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 98.92 | |
| KOG2630 | 254 | consensus Enolase-phosphatase E-1 [Amino acid tran | 98.91 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 98.86 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.82 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.77 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 98.77 | |
| PF05761 | 448 | 5_nucleotid: 5' nucleotidase family; InterPro: IPR | 98.77 | |
| PF06941 | 191 | NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol | 98.76 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 98.72 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 98.71 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.65 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 98.65 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.59 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 98.58 | |
| TIGR02250 | 156 | FCP1_euk FCP1-like phosphatase, phosphatase domain | 98.57 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.56 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 98.5 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 98.47 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 98.46 | |
| COG4996 | 164 | Predicted phosphatase [General function prediction | 98.45 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.41 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 98.36 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 98.33 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 98.33 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 98.32 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 98.31 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 98.3 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.27 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 98.26 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 98.21 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 98.17 | |
| PF03031 | 159 | NIF: NLI interacting factor-like phosphatase; Inte | 98.16 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.15 | |
| PF11019 | 252 | DUF2608: Protein of unknown function (DUF2608); In | 98.14 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 98.11 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 98.08 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 98.06 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 98.05 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 98.04 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 98.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 98.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.94 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 97.94 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 97.88 | |
| COG5663 | 194 | Uncharacterized conserved protein [Function unknow | 97.88 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 97.83 | |
| KOG3110 | 153 | consensus Riboflavin kinase [Coenzyme transport an | 97.81 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.8 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 97.74 | |
| PLN02423 | 245 | phosphomannomutase | 97.68 | |
| COG2503 | 274 | Predicted secreted acid phosphatase [General funct | 97.68 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.58 | |
| COG3882 | 574 | FkbH Predicted enzyme involved in methoxymalonyl-A | 97.57 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 97.56 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 97.54 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 97.54 | |
| KOG2470 | 510 | consensus Similar to IMP-GMP specific 5'-nucleotid | 97.52 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 97.49 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.47 | |
| COG5610 | 635 | Predicted hydrolase (HAD superfamily) [General fun | 97.43 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 97.38 | |
| PLN02499 | 498 | glycerol-3-phosphate acyltransferase | 97.36 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.34 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 97.24 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 97.22 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 97.21 | |
| KOG2469 | 424 | consensus IMP-GMP specific 5'-nucleotidase [Nucleo | 96.93 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 96.89 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.84 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 96.62 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 96.5 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.43 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 96.29 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 96.21 | |
| TIGR01658 | 274 | EYA-cons_domain eyes absent protein conserved doma | 96.12 | |
| KOG2134 | 422 | consensus Polynucleotide kinase 3' phosphatase [Re | 95.09 | |
| PF05822 | 246 | UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter | 94.99 | |
| PLN02580 | 384 | trehalose-phosphatase | 94.7 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.47 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 94.33 | |
| KOG3128 | 298 | consensus Uncharacterized conserved protein [Funct | 94.07 | |
| PLN03017 | 366 | trehalose-phosphatase | 94.05 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 94.01 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 93.66 | |
| KOG2961 | 190 | consensus Predicted hydrolase (HAD superfamily) [G | 93.63 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 93.47 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.43 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.32 | |
| PLN02580 | 384 | trehalose-phosphatase | 93.2 | |
| COG4850 | 373 | Uncharacterized conserved protein [Function unknow | 93.12 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 93.12 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 92.9 | |
| PF06189 | 264 | 5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103 | 92.88 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 91.91 | |
| COG4502 | 180 | 5'(3')-deoxyribonucleotidase [Nucleotide transport | 91.5 | |
| KOG1618 | 389 | consensus Predicted phosphatase [General function | 89.64 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 89.59 | |
| KOG2882 | 306 | consensus p-Nitrophenyl phosphatase [Inorganic ion | 89.48 | |
| KOG0323 | 635 | consensus TFIIF-interacting CTD phosphatases, incl | 89.44 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 89.44 | |
| KOG2116 | 738 | consensus Protein involved in plasmid maintenance/ | 89.04 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 87.7 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 87.45 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 87.13 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 86.29 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 86.23 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 86.2 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 85.98 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 85.95 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 84.5 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 84.42 | |
| KOG3107 | 468 | consensus Predicted haloacid dehalogenase-like hyd | 83.91 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 83.51 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 82.83 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 82.82 | |
| PF13580 | 138 | SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_ | 82.02 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 81.94 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 81.53 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 80.85 |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-40 Score=286.53 Aligned_cols=252 Identities=75% Similarity=1.238 Sum_probs=228.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (287)
.+++|+||+||||+|+...+..+++.+++++|..++........|.+..+.+..++..++.+...+++...+.+.+.+..
T Consensus 10 ~ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (382)
T PLN02940 10 LVSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYGLPCSTDEFNSEITPLLSEQW 89 (382)
T ss_pred cCCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999988887778888988888888888888776666777777777776666
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
....++||+.++|+.|+++|++++|+||++...++..+.++.|+.++|+.+++++++...||+|+.|..+++.++++|++
T Consensus 90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~~ 169 (382)
T PLN02940 90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPSN 169 (382)
T ss_pred ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChhH
Confidence 67889999999999999999999999999999988888337899999999999999999999999999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccccCCCCccccccCCCCCCCceeeccceeee
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVVKGL 247 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~~~~ 247 (287)
|++|||+..|+.+|+++|+.++++.++.........++++++++.++...-.++|++++|+.+++|..|+...|.|.+|.
T Consensus 170 ~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~sl~el~~~~~~~~~~~~~~~~~~~~~~y~~~G~Vv~G~ 249 (382)
T PLN02940 170 CLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINSLLDLQPEKWGLPPFNDWIEGTLPIEPWHIGGPVIKGF 249 (382)
T ss_pred EEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCCHhHcCHHHcCCCCccccccCcCCcCCEEEEEEEEeCC
Confidence 99999999999999999999999988654343456789999999999887788999999999999999999999999999
Q ss_pred ccCccccchhHh
Q 023109 248 GRGSKLICLQRV 259 (287)
Q Consensus 248 ~~~~~~l~~~~~ 259 (287)
+++++.||.|||
T Consensus 250 ~~G~~~lg~PTa 261 (382)
T PLN02940 250 GRGSKVLGIPTA 261 (382)
T ss_pred ccCcccCCCCcc
Confidence 999998999999
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=216.97 Aligned_cols=211 Identities=21% Similarity=0.369 Sum_probs=173.3
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH-HHHHHHhCCCHHHHHHHHHHHhCC-CCCHHHHHHHHHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGL-PCAKHEFVNEVYSM 82 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (287)
+..++++|+||+||||+|+...+..+++++++++|..... .......|.........+...... ......+...+.+.
T Consensus 3 ~~~~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (222)
T PRK10826 3 TPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIAR 82 (222)
T ss_pred CcccCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence 3446899999999999999999999999999999987665 455667777666655555444432 12334444445444
Q ss_pred HHhh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHc
Q 023109 83 FSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (287)
Q Consensus 83 ~~~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l 161 (287)
+.+. ....+++||+.++|+.++++|++++++||+....++..+ +.+++..+|+.++++++.+..||+|+.+..+++++
T Consensus 83 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~ 161 (222)
T PRK10826 83 VISLIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVL-TMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKL 161 (222)
T ss_pred HHHHHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHc
Confidence 4433 236789999999999999999999999999999999999 88999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc-cccCCcEEeCCccCcCc
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLRP 216 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~-~~~~a~~v~~~l~el~~ 216 (287)
|+.|++|++|||+.+|+++|+++|+++++++.+....+ ....++.++.++.++..
T Consensus 162 ~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 162 GVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLESLTELTA 217 (222)
T ss_pred CCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccCHHHHhh
Confidence 99999999999999999999999999999988654432 34568999999998754
|
|
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.98 E-value=7e-31 Score=218.14 Aligned_cols=206 Identities=26% Similarity=0.345 Sum_probs=164.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCC----CCCHHHH-HHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK----EWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 80 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
+.++++|+||+||||+|+...+..+++++++++|. +...+.+ +...|.+..+.+..++.. ... ...++...+.
T Consensus 19 ~~~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 96 (248)
T PLN02770 19 LAPLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPD-DLE-RGLKFTDDKE 96 (248)
T ss_pred cCccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCc-chh-hHHHHHHHHH
Confidence 34689999999999999999999999999999864 3444433 355677666555444321 110 1112223333
Q ss_pred HHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 81 SMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 81 ~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
..+.... ...+++||+.++|+.|+++|++++|+||++...++..+ +++|+.++|+.+++++++...||+|+.|.++++
T Consensus 97 ~~y~~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~ 175 (248)
T PLN02770 97 ALFRKLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMI-SLLGLSDFFQAVIIGSECEHAKPHPDPYLKALE 175 (248)
T ss_pred HHHHHHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCChhhCcEEEecCcCCCCCCChHHHHHHHH
Confidence 3444333 35789999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-ccCCcEEeCCccCc
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDL 214 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~~a~~v~~~l~el 214 (287)
+++++|++|+||||+..|+.+|+++|+.++++..+...... ...++++++++.++
T Consensus 176 ~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 176 VLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred HhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 99999999999999999999999999999999876533333 45789999999984
|
|
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.98 E-value=7.8e-31 Score=214.02 Aligned_cols=210 Identities=25% Similarity=0.405 Sum_probs=178.0
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
+++++|+||+||||+|+...+..+++.++++++.. ..........|......+............. +..+.+.+.+..
T Consensus 2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 80 (220)
T COG0546 2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAA-ELVERLREEFLT 80 (220)
T ss_pred CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHH-HHHHHHHHHHHH
Confidence 56899999999999999999999999999999998 7888888899998888777655443322111 344444444444
Q ss_pred hhcc---CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 86 HLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 86 ~~~~---~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
.+.. ..++||+.++|..++++|++++++||.+...++..+ +++|+..+|+.+++.++....||+|..+..+++.++
T Consensus 81 ~~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l-~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~ 159 (220)
T COG0546 81 AYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILL-KALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLG 159 (220)
T ss_pred HHHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhC
Confidence 4432 579999999999999999999999999999999999 889999999999998889999999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCC-cccc-ccCCcEEeCCccCcCccc
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHR-YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~-~~~~-~~~a~~v~~~l~el~~~~ 218 (287)
++|++++||||+.+|+.+|++||+.++.+.+++. .... ...+++++.++.++...+
T Consensus 160 ~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l 217 (220)
T COG0546 160 LDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDSLAELLALL 217 (220)
T ss_pred CChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECCHHHHHHHH
Confidence 9988999999999999999999999999999864 2333 567899999999986543
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=6.4e-31 Score=218.65 Aligned_cols=208 Identities=23% Similarity=0.293 Sum_probs=166.0
Q ss_pred CccEEEEecCCcccccH-HHHHHHHHHHHHHcCCCCCHHHH-HHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~-~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
.+|+|+||+||||+||. ..+..+++.+++++|........ +...|.+....+..++...........+...+...+..
T Consensus 23 ~~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 102 (260)
T PLN03243 23 GWLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLCWSRDFLQMKRLAIRKEDLYEY 102 (260)
T ss_pred CceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhccCCCHHHHHHHHHHHHHHHHH
Confidence 57999999999999995 56778999999999998765544 56788888777666543211000112333333333322
Q ss_pred hh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 86 ~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
.. ...+++||+.++|+.|+++|++++|+||++...++..+ +++|+..+|+.+++++++...||+|+.|..+++++|++
T Consensus 103 ~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l-~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~ 181 (260)
T PLN03243 103 MQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAI-EAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFI 181 (260)
T ss_pred HHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHH-HHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCC
Confidence 22 25678999999999999999999999999999999999 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
|++|+||||+..|+.+|+++|+.++++.. .........+++++.++.++...
T Consensus 182 p~~~l~IgDs~~Di~aA~~aG~~~i~v~g-~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 182 PERCIVFGNSNSSVEAAHDGCMKCVAVAG-KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred hHHeEEEcCCHHHHHHHHHcCCEEEEEec-CCchhhhccCCEEeCCHHHHHHH
Confidence 99999999999999999999999999974 33233334689999999988544
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=5.9e-31 Score=216.20 Aligned_cols=209 Identities=22% Similarity=0.350 Sum_probs=167.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
.++|+|+||+||||+|+...+..+++.+++++|.+ .+.+..+...|.+....+........ ....+++...+.+.+..
T Consensus 10 ~~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 88 (229)
T PRK13226 10 RFPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAFPELD-AAARDALIPEFLQRYEA 88 (229)
T ss_pred ccCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHhccCC-hHHHHHHHHHHHHHHHH
Confidence 35699999999999999999999999999999986 55666666666655544433322211 11123444555555544
Q ss_pred hh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 86 ~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
.. ...+++||+.++|+.|+++|++++++||++...+...+ +++|+..+|+.++++++....||+|+.|.++++.+|++
T Consensus 89 ~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~ 167 (229)
T PRK13226 89 LIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLIL-PQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVA 167 (229)
T ss_pred hhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCC
Confidence 33 35788999999999999999999999999998888888 88999999999999988888999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcc--cc-ccCCcEEeCCccCcCcc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT--HR-YTAADEVINSLLDLRPE 217 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~--~~-~~~a~~v~~~l~el~~~ 217 (287)
|++|+||||+.+|+.+|+++|+.++++..+.... .. ...++++++++.++...
T Consensus 168 p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 168 PTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred hhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 9999999999999999999999999998765322 12 35689999999988543
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-30 Score=211.78 Aligned_cols=204 Identities=23% Similarity=0.305 Sum_probs=168.7
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHH---HHHHHHHHHHHhhh
Q 023109 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKH---EFVNEVYSMFSDHL 87 (287)
Q Consensus 12 iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 87 (287)
|+||+||||+|+...+..+++.+++++|.. .+........+.+....+..++..++.+.+.+ .+.+.+.+.+....
T Consensus 1 viFD~DGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (213)
T TIGR01449 1 VLFDLDGTLVDSAPDIAAAVNMALAALGLPPATLARVIGFIGNGVPVLMERVLAWAGQEPDAQRVAELRKLFDRHYEEVA 80 (213)
T ss_pred CeecCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhcccHHHHHHHHhhccccccChHHHHHHHHHHHHHHHHhc
Confidence 689999999999988889999999999986 56666677778877777777666655443322 33333444444333
Q ss_pred c-cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 88 C-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 88 ~-~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
. ..+++||+.++|+.++++|++++++|+++...++..+ +++|+..+|+.++++++....||+|+.|.++++.++++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~ 159 (213)
T TIGR01449 81 GELTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLL-ELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQ 159 (213)
T ss_pred cccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChh
Confidence 2 4689999999999999999999999999999999999 8899999999999999999999999999999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc-c-ccCCcEEeCCccCcCc
Q 023109 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-R-YTAADEVINSLLDLRP 216 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~-~-~~~a~~v~~~l~el~~ 216 (287)
+|++|||+.+|+.+|+++|+.++++..+..... . ...++++++++.++..
T Consensus 160 ~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~ 211 (213)
T TIGR01449 160 QMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPP 211 (213)
T ss_pred HeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHh
Confidence 999999999999999999999999987654322 2 3568999999988753
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.1e-31 Score=214.21 Aligned_cols=207 Identities=24% Similarity=0.366 Sum_probs=171.1
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-HhCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDH 86 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (287)
+|+|+||+||||+|+...+..+++++++++|.+.+...... +.|.+..+.+..++...+.+. ..+.+...+.+.+...
T Consensus 1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (220)
T TIGR03351 1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALLALDGADEAEAQAAFADFEERLAEA 80 (220)
T ss_pred CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999877666655 778888887777776655431 1233344444444443
Q ss_pred hc--cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--cccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 87 LC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 87 ~~--~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~--~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
+. ..+++||+.++|+.++++|++++++||+....++..+ +++|+. .+|+.++++++....||+|+.|.+++++++
T Consensus 81 ~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~ 159 (220)
T TIGR03351 81 YDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLL-EKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTG 159 (220)
T ss_pred hcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcC
Confidence 32 4689999999999999999999999999999999999 888998 999999999998889999999999999999
Q ss_pred CC-CCcEEEEeCCHhhHHHHHHcCCeE-EEECCCCCccc-c-ccCCcEEeCCccCcCc
Q 023109 163 ME-PSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTH-R-YTAADEVINSLLDLRP 216 (287)
Q Consensus 163 ~~-~~~~l~iGDs~~Dv~~a~~aG~~~-i~v~~~~~~~~-~-~~~a~~v~~~l~el~~ 216 (287)
+. |++|+||||+..|+.+|+++|+.+ +++..+..... . ...+++++.++.++..
T Consensus 160 ~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 160 VQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred CCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 97 799999999999999999999999 88877543332 2 3567889998887643
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-30 Score=212.98 Aligned_cols=204 Identities=23% Similarity=0.348 Sum_probs=167.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++++|+||+||||+|+...+..++++++++++.. .+.+......|.+..+.+..+ . +...+.+...+...+...
T Consensus 2 ~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~ 76 (214)
T PRK13288 2 KINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKI----D-ESKVEEMITTYREFNHEH 76 (214)
T ss_pred CccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhc----C-HHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999998764 566667777887766555432 1 112333333333333322
Q ss_pred h-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 87 ~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
. ...+++||+.++|+.|+++|++++++||+....+..++ +.+|+..+|+.++++++....||+|+.+.+++++++++|
T Consensus 77 ~~~~~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~ 155 (214)
T PRK13288 77 HDELVTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGL-KLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKP 155 (214)
T ss_pred hhhhcccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCH
Confidence 2 35678999999999999999999999999999999999 889999999999999999999999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc-c-ccCCcEEeCCccCcCcc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-R-YTAADEVINSLLDLRPE 217 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~-~-~~~a~~v~~~l~el~~~ 217 (287)
++++||||+.+|+.+|+++|+.++++..+..... . ...++++++++.++.+.
T Consensus 156 ~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 156 EEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred HHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 9999999999999999999999999988643332 2 45689999999987654
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=222.10 Aligned_cols=207 Identities=25% Similarity=0.290 Sum_probs=170.8
Q ss_pred CccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCCHH-HHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
..++|+||+||||+|+.. .+..++.++++++|...... ......|.+..+.+..++.....+...+++.+.+.+.+.+
T Consensus 130 ~~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~~~~~~~e~l~~~~~~~y~~ 209 (381)
T PLN02575 130 GWLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWSRDPAELRRMATRKEEIYQA 209 (381)
T ss_pred CCCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhccCCHHHHHHHHHHHHHHHHH
Confidence 578999999999999976 56679999999999886655 4467889888887776654322111233444444554544
Q ss_pred hhc-cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 86 HLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 86 ~~~-~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
... ...++||+.++|+.|+++|++++|+||++...++..+ +++|+..+|+.+++++++...||+|+.|..+++.+|+.
T Consensus 210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L-~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~ 288 (381)
T PLN02575 210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAI-GSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFI 288 (381)
T ss_pred HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCC
Confidence 433 4688999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
|++|+||||+..|+++|+++|+.++++..+.... ....++++++++.++..
T Consensus 289 Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~-~l~~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 289 PERCIVFGNSNQTVEAAHDARMKCVAVASKHPIY-ELGAADLVVRRLDELSI 339 (381)
T ss_pred cccEEEEcCCHHHHHHHHHcCCEEEEECCCCChh-HhcCCCEEECCHHHHHH
Confidence 9999999999999999999999999998754332 23458999999999843
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=212.04 Aligned_cols=188 Identities=34% Similarity=0.517 Sum_probs=163.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 85 (287)
++++++||+||||+||...+..+|.++++++|...+.+......+.........+........ ...............
T Consensus 1 ~~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T COG0637 1 MIKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARIIDLLRKLAAGEDPADLAELERLLYEAEAL 80 (221)
T ss_pred CCcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHHHHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence 478999999999999999999999999999999999888877888877777777766665432 233333333333444
Q ss_pred hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
.....++.||+.++|+.|+++|++++++|++++..++..+ ...|+.++|+.+++++++..+||+|+.|..+++++|+.|
T Consensus 81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L-~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P 159 (221)
T COG0637 81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVL-ARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDP 159 (221)
T ss_pred hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHH-HHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCCh
Confidence 4567899999999999999999999999999999999999 999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCC
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~ 196 (287)
++|++|+||++++.++++|||.+++++.+..
T Consensus 160 ~~CvviEDs~~Gi~Aa~aAGm~vv~v~~~~~ 190 (221)
T COG0637 160 EECVVVEDSPAGIQAAKAAGMRVVGVPAGHD 190 (221)
T ss_pred HHeEEEecchhHHHHHHHCCCEEEEecCCCC
Confidence 9999999999999999999999999998443
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=216.37 Aligned_cols=207 Identities=18% Similarity=0.255 Sum_probs=163.9
Q ss_pred ccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHH----------HHHHhCCCCCHHH---
Q 023109 9 MSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCAKHE--- 74 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~--- 74 (287)
+++|+||+||||+|+.. .+..+++++++++|...+.+......|.+....+.. +...++.+...+.
T Consensus 2 ~k~viFD~DGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (253)
T TIGR01422 2 IEAVIFDWAGTTVDFGSFAPTQAFVEAFAEFGVQITLEEARGPMGLGKWDHIRALLKMPAVAERWRAKFGRLPTEADIEA 81 (253)
T ss_pred ceEEEEeCCCCeecCCCccHHHHHHHHHHHcCCCccHHHHHHhcCccHHHHHHHHhcCHHHHHHHHHHhCCCCCHHHHHH
Confidence 68999999999999854 346788999999998877777766777665443332 3344444322322
Q ss_pred HHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcCCCCCCHH
Q 023109 75 FVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPD 152 (287)
Q Consensus 75 ~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~~~kp~~~ 152 (287)
+...+.+.+.+.. ...+++||+.++|+.|+++|++++|+||++...++.++ +++|+..+| +.+++++++...||+|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l-~~~gl~~~f~d~ii~~~~~~~~KP~p~ 160 (253)
T TIGR01422 82 IYEAFEPLQLAKLAEYSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVA-PEAALQGYRPDYNVTTDDVPAGRPAPW 160 (253)
T ss_pred HHHHHHHHHHHHHHhcCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HHHHhcCCCCceEEccccCCCCCCCHH
Confidence 3333333332222 35789999999999999999999999999999999999 888999886 99999999999999999
Q ss_pred HHHHHHHHcCCC-CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc------------------------ccc-ccCCcE
Q 023109 153 IFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAADE 206 (287)
Q Consensus 153 ~~~~~~~~l~~~-~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~a~~ 206 (287)
.|.++++++++. |++|+|||||++|+.+|+++|+.++++..+... ... ...+++
T Consensus 161 ~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 240 (253)
T TIGR01422 161 MALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLKAAGAHY 240 (253)
T ss_pred HHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHHhcCCCE
Confidence 999999999995 999999999999999999999999999887541 122 457899
Q ss_pred EeCCccCcCc
Q 023109 207 VINSLLDLRP 216 (287)
Q Consensus 207 v~~~l~el~~ 216 (287)
+++++.++..
T Consensus 241 v~~~~~el~~ 250 (253)
T TIGR01422 241 VIDTLAELPA 250 (253)
T ss_pred ehhcHHHHHH
Confidence 9999998754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-30 Score=208.86 Aligned_cols=200 Identities=27% Similarity=0.404 Sum_probs=157.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH--HHh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM--FSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 85 (287)
++++|+||+||||+|+...+..+++++++++|.+. .+......|.+....++.+.... ..+.+...+... +..
T Consensus 2 ~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 76 (218)
T PRK11587 2 RCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAP-DEVLNFIHGKQAITSLRHFMAGA----SEAEIQAEFTRLEQIEA 76 (218)
T ss_pred CCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCH-HHHHHHHcCCCHHHHHHHHhccC----CcHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999999999864 23333445776666555543321 233333333321 111
Q ss_pred -hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 86 -HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 86 -~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
......++||+.++|+.|+++|++++++||++...+...+ +..++ ..|+.++++++....||+|+.|..+++.+|+.
T Consensus 77 ~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l-~~~~l-~~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~ 154 (218)
T PRK11587 77 TDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARH-KAAGL-PAPEVFVTAERVKRGKPEPDAYLLGAQLLGLA 154 (218)
T ss_pred hhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHH-HhcCC-CCccEEEEHHHhcCCCCCcHHHHHHHHHcCCC
Confidence 1246788999999999999999999999999888777777 77787 45788888888888999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
|++|+|||||..|+.+|+++|+.++++..+... .....++++++++.++.
T Consensus 155 p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~-~~~~~~~~~~~~~~el~ 204 (218)
T PRK11587 155 PQECVVVEDAPAGVLSGLAAGCHVIAVNAPADT-PRLDEVDLVLHSLEQLT 204 (218)
T ss_pred cccEEEEecchhhhHHHHHCCCEEEEECCCCch-hhhccCCEEecchhhee
Confidence 999999999999999999999999999875432 23456899999999874
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=202.09 Aligned_cols=185 Identities=28% Similarity=0.454 Sum_probs=158.4
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
||.++++|+||+||||+|+...+..+++++++++|.+.+........|.+..+.+..+....+.....+++.......+.
T Consensus 1 ~~~~~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (188)
T PRK10725 1 MYDRYAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWRIAQAIIELNQADLDPHALAREKTEAVK 80 (188)
T ss_pred CCCcceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Confidence 56678999999999999999999999999999999887777777788888877777777766655455555554444443
Q ss_pred hhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 85 ~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
... ...++.|+ .++|..+++. ++++++||++...++.++ +++|+..+|+.++++++....||+|+.|..+++++++
T Consensus 81 ~~~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~ 157 (188)
T PRK10725 81 SMLLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALL-AHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGV 157 (188)
T ss_pred HHHhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHH-HhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCC
Confidence 332 45667785 6899999876 899999999999999999 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEEC
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~ 192 (287)
+|++|+||||+..|+++|+++|++++.+.
T Consensus 158 ~~~~~l~igDs~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 158 QPTQCVVFEDADFGIQAARAAGMDAVDVR 186 (188)
T ss_pred CHHHeEEEeccHhhHHHHHHCCCEEEeec
Confidence 99999999999999999999999999875
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=215.03 Aligned_cols=212 Identities=19% Similarity=0.253 Sum_probs=164.6
Q ss_pred cCCccEEEEecCCcccccHHH-HHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHH----------HHHhCCCCCHH-
Q 023109 6 KKLMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAII----------VEDYGLPCAKH- 73 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~- 73 (287)
|+++|+|+||+||||+|+... ...+++++++++|.+.+.+......|.+....+..+ ...++.+...+
T Consensus 1 ~~~~k~vIFDlDGTLiDs~~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 80 (267)
T PRK13478 1 MMKIQAVIFDWAGTTVDFGSFAPTQAFVEAFAQFGVEITLEEARGPMGLGKWDHIRALLKMPRVAARWQAVFGRLPTEAD 80 (267)
T ss_pred CCceEEEEEcCCCCeecCCCccHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHhcHHHHHHHHHHhCCCCCHHH
Confidence 345899999999999998543 367889999999988777666667776654433322 23344432222
Q ss_pred --HHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcCCCCC
Q 023109 74 --EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKP 149 (287)
Q Consensus 74 --~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~~~kp 149 (287)
++...+.+.+.+.. ....++||+.++|+.|+++|++++|+||++...+...+ +.+++..+| +.++++++....||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l-~~~~l~~~~~d~i~~~~~~~~~KP 159 (267)
T PRK13478 81 VDALYAAFEPLQIAKLADYATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVV-PLAAAQGYRPDHVVTTDDVPAGRP 159 (267)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHHhhcCCCceEEEcCCcCCCCCC
Confidence 23333333333322 35788999999999999999999999999999998888 777877764 89999999989999
Q ss_pred CHHHHHHHHHHcCCC-CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc------------------------ccc-ccC
Q 023109 150 SPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTA 203 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~-~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~ 203 (287)
+|+.|.++++++|+. |++|+||||+++|+.+|+++|+.++++..++.. ... ...
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 239 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLRAAG 239 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHHHcC
Confidence 999999999999996 699999999999999999999999999887542 122 457
Q ss_pred CcEEeCCccCcCccc
Q 023109 204 ADEVINSLLDLRPEK 218 (287)
Q Consensus 204 a~~v~~~l~el~~~~ 218 (287)
++++++++.++...+
T Consensus 240 a~~vi~~~~~l~~~l 254 (267)
T PRK13478 240 AHYVIDTIADLPAVI 254 (267)
T ss_pred CCeehhhHHHHHHHH
Confidence 899999999886543
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-30 Score=208.93 Aligned_cols=206 Identities=23% Similarity=0.369 Sum_probs=167.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHH-HHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
+++++|+||+||||+|+...+..++.++++++|...+.+. .....+.+....+..+...++.+...+.+...+.+.+..
T Consensus 2 ~~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T PRK10563 2 SQIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHGVTLAKAELEPVYRAEVAR 81 (221)
T ss_pred CCCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 3589999999999999999888999999999998876543 455677778888888888887765566666555544433
Q ss_pred hh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc-eeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 86 ~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd-~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
.. ...+++||+.++|+.| +++++++||++...++..+ +++|+..+|+ .++++++.+..||+|+.|..+++.+++
T Consensus 82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l-~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~ 157 (221)
T PRK10563 82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSL-GKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNV 157 (221)
T ss_pred HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHH-HhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCC
Confidence 32 4678899999999998 3899999999999999999 8899999996 677777888999999999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
+|++|++|||++.|+.+|+++|+.++++..+.........++.++.++.++.+
T Consensus 158 ~p~~~l~igDs~~di~aA~~aG~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 210 (221)
T PRK10563 158 NVENCILVDDSSAGAQSGIAAGMEVFYFCADPHNKPIDHPLVTTFTDLAQLPE 210 (221)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCEEEEECCCCCCcchhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999887543322223344556677776654
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=206.87 Aligned_cols=205 Identities=21% Similarity=0.313 Sum_probs=150.7
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHH---HHHcCCCCCHHHHHHHhC-------CCHHHHHHHHHHHhCCCCCHHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGREKHKIVG-------KTPLEEAAIIVEDYGLPCAKHEFVNE 78 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~---~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (287)
+++|+||+||||+|+...+..+++.+ +.++|.+.+.+......+ ....................+.....
T Consensus 2 ~~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTSGLAEKARRNAIEVLIEAGLNVDFEEAYEELLKLIKEYGSNYPTHFDYLIRRLWEEYNPKLVAAF 81 (221)
T ss_pred ceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCcCCHHHHHHHHHHHHHHhccccCcchHHHHHHHhhhcCHHHHHHH
Confidence 78999999999999987776666544 456666665544322111 11000111111222211122222222
Q ss_pred HHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHH
Q 023109 79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
...........++++||+.++|+.|+++|++++++||++...+...+ +++|+..+|+.++++++.+..||+|+.|..++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~ 160 (221)
T TIGR02253 82 VYAYHKLKFAYLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKL-ERLGVRDFFDAVITSEEEGVEKPHPKIFYAAL 160 (221)
T ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhCChHHhccEEEEeccCCCCCCCHHHHHHHH
Confidence 22322323345789999999999999999999999999998888899 88999999999999999999999999999999
Q ss_pred HHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcc---ccccCCcEEeCCccCc
Q 023109 159 KRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT---HRYTAADEVINSLLDL 214 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~---~~~~~a~~v~~~l~el 214 (287)
+++|++|++++||||++ +|+.+|+++|+.++++..+.... .....+++++.++.++
T Consensus 161 ~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 161 KRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred HHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 99999999999999998 89999999999999998865432 2234578888888765
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=202.94 Aligned_cols=213 Identities=22% Similarity=0.296 Sum_probs=171.7
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHH---HHHHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVY 80 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 80 (287)
+.+++++|+||+||||+|+...+..++..++++++.+ .+........+......+...+...+.....+. +...+.
T Consensus 2 ~~~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (226)
T PRK13222 2 KFMDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWAGREPDEELLEKLRELFD 81 (226)
T ss_pred CCCcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhccCCccHHHHHHHHHHHH
Confidence 3455899999999999999888888999999999986 455566677777776666665544333323222 333344
Q ss_pred HHHHhhhc-cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 81 SMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 81 ~~~~~~~~-~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
+.+..... ...+.||+.++++.++++|++++++|++....++..+ +++|+..+|+.++++++....||+|+.+..+++
T Consensus 82 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~ 160 (226)
T PRK13222 82 RHYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLL-EALGIADYFSVVIGGDSLPNKKPDPAPLLLACE 160 (226)
T ss_pred HHHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCccCccEEEcCCCCCCCCcChHHHHHHHH
Confidence 44443332 5789999999999999999999999999999998888 888999999999999988899999999999999
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcc-c-cccCCcEEeCCccCcCccc
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-H-RYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~-~-~~~~a~~v~~~l~el~~~~ 218 (287)
.+++++++|++|||+.+|+.+|+++|+.++++..+.... . ....+++++.++.++...+
T Consensus 161 ~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 161 KLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred HcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999998865422 2 2456889999999886543
|
|
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.9e-29 Score=208.19 Aligned_cols=210 Identities=25% Similarity=0.311 Sum_probs=167.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-CHHHHHHHhCCCHHHHHHHHHHH----hCCC-CCHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVED----YGLP-CAKHEFVNEVY 80 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~ 80 (287)
.++++|+||+||||+|+...+..+++.+++++|... ..+......+.+........+.. .+.+ ...+.+...+.
T Consensus 11 ~~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 90 (272)
T PRK13223 11 RLPRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFM 90 (272)
T ss_pred ccCCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHH
Confidence 568999999999999999999999999999999875 34455567777666555544321 1111 01222333333
Q ss_pred HHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHH
Q 023109 81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~ 160 (287)
+.+.......+++||+.++|+.++++|++++++||++...++..+ +++++..+|+.++++++....||+|+.+..+++.
T Consensus 91 ~~~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l-~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~ 169 (272)
T PRK13223 91 EAYADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLL-DQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKM 169 (272)
T ss_pred HHHHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHH-HHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHH
Confidence 333332334678999999999999999999999999999888888 8889999999999999888899999999999999
Q ss_pred cCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCcc
Q 023109 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPE 217 (287)
Q Consensus 161 l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~ 217 (287)
+|+.|++|++|||+.+|+++|+++|+.++++..+...... ...++++++++.++...
T Consensus 170 ~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 170 AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999999886543332 35789999999998643
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=206.75 Aligned_cols=203 Identities=19% Similarity=0.292 Sum_probs=163.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (287)
.+++++||+||||+|+...+..+++++++++|.. .+.+.+....+....... ..++.+ ...+++...+.+.+..
T Consensus 61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~~~~i~----~~~~~~~~~~~~~~~~~~~~~~~ 136 (273)
T PRK13225 61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWSSRTIV----RRAGLSPWQQARLLQRVQRQLGD 136 (273)
T ss_pred hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHH----HHcCCCHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999986 555556566666554433 333432 1223444455555544
Q ss_pred hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
.....+++||+.++|+.|+++|++++|+||+....++..+ +++|+.++|+.++++++. +++++.+.+++++++++|
T Consensus 137 ~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L-~~~gl~~~F~~vi~~~~~---~~k~~~~~~~l~~~~~~p 212 (273)
T PRK13225 137 CLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFL-QRQGLRSLFSVVQAGTPI---LSKRRALSQLVAREGWQP 212 (273)
T ss_pred hcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCChhheEEEEecCCC---CCCHHHHHHHHHHhCcCh
Confidence 4456788999999999999999999999999999999999 899999999998877654 345789999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc-c-ccCCcEEeCCccCcCccc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-R-YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~-~-~~~a~~v~~~l~el~~~~ 218 (287)
++|+||||+.+|+.+|+++|+.++++..+..... . ...++++++++.++...+
T Consensus 213 ~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~ 267 (273)
T PRK13225 213 AAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAV 267 (273)
T ss_pred hHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999988754432 2 457899999999987654
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=198.66 Aligned_cols=197 Identities=24% Similarity=0.318 Sum_probs=158.4
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHc-CCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc
Q 023109 12 VILDLDGTLLNTDGMFSEVLKTFLVKY-GKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 89 (287)
Q Consensus 12 iifDlDGTL~d~~~~~~~~~~~~~~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (287)
|+||+||||+|+...+..++++++++. +.. .+.+.+....+......++ ..+.+. ... ..+..........
T Consensus 1 iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~--~~~-~~~~~~~~~~~~~ 73 (205)
T TIGR01454 1 VVFDLDGVLVDSFAVMREAFAIAYREVVGDGPAPFEEYRRHLGRYFPDIMR----IMGLPL--EME-EPFVRESYRLAGE 73 (205)
T ss_pred CeecCcCccccCHHHHHHHHHHHHHHhcCCCCCCHHHHHHHhCccHHHHHH----HcCCCH--HHH-HHHHHHHHHhhcc
Confidence 689999999999999999999999874 653 4566666677766554433 333321 111 1111111222346
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
.+++||+.++|+.|+++|++++++||++...++..+ +++|+..+|+.++++++....||+|+.+.++++.++++|++|+
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~l 152 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGKSGPRARSLL-EALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPEDAV 152 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhheE
Confidence 889999999999999999999999999999999889 8999999999999999888899999999999999999999999
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRP 216 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~ 216 (287)
||||+.+|+.+|+++|++++++..+...... ...++++++++.++..
T Consensus 153 ~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 153 MVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred EEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHH
Confidence 9999999999999999999999887544322 4578999999988754
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-28 Score=194.10 Aligned_cols=179 Identities=30% Similarity=0.449 Sum_probs=150.7
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHhhh
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSDHL 87 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 87 (287)
+|+||+||||+|+...+..+++++++.+|.+.+........+.+..+.+..++...+.+.+.+. +...+.+.+.+..
T Consensus 1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR01990 1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLGGKKYSEEEKEELAERKNDYYVELL 80 (185)
T ss_pred CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4899999999999999999999999999998877777778888888888888887776544333 2333333333322
Q ss_pred ---ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 88 ---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 88 ---~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
....++||+.++|+.|+++|++++++|++.. ....+ +++|+..+|+.++++++.+..||+|+.|.+++++++++
T Consensus 81 ~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~ 157 (185)
T TIGR01990 81 KELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVL-EKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVS 157 (185)
T ss_pred HhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHH-HhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCC
Confidence 2347899999999999999999999998753 35567 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEEC
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVP 192 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~ 192 (287)
|++|+||||+.+|+.+|+++|++++++.
T Consensus 158 ~~~~v~vgD~~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 158 PSECIGIEDAQAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred HHHeEEEecCHHHHHHHHHcCCEEEecC
Confidence 9999999999999999999999999873
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-28 Score=192.24 Aligned_cols=180 Identities=30% Similarity=0.497 Sum_probs=151.0
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHH---HHHHHHHHHHh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHE---FVNEVYSMFSD 85 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 85 (287)
+++|+||+||||+|+...+..+++.+++++|..++........|.+....+..++..++.....+. +.....+.+.+
T Consensus 1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (185)
T TIGR02009 1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLRKPGLSLETIHQLAERKNELYRE 80 (185)
T ss_pred CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999999988775555667778888888888777643333333 33333344444
Q ss_pred hh--ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 86 HL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 86 ~~--~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
.. ...+++||+.++|+.++++|++++++|++ ..++..+ +++|+..+|+.++++++.+..||+|+.|.++++.+++
T Consensus 81 ~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l-~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~ 157 (185)
T TIGR02009 81 LLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRIL-AKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGV 157 (185)
T ss_pred HHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHH-HHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCC
Confidence 33 24789999999999999999999999998 5577788 8899999999999999998999999999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEE
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
+|+++++|||+..|+.+|+++|+.++.+
T Consensus 158 ~~~~~v~IgD~~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 158 SPNECVVFEDALAGVQAARAAGMFAVAV 185 (185)
T ss_pred CHHHeEEEeCcHhhHHHHHHCCCeEeeC
Confidence 9999999999999999999999998864
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-28 Score=197.00 Aligned_cols=202 Identities=19% Similarity=0.245 Sum_probs=154.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCC-------------HH----HHHHHHHHHhCCCCC
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT-------------PL----EEAAIIVEDYGLPCA 71 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-------------~~----~~~~~~~~~~~~~~~ 71 (287)
+|+|+||+||||+|+......+++++++++|..........+.+.. .. ..+..++...+.+..
T Consensus 1 ~k~viFD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T TIGR02254 1 YKTLLFDLDDTILDFQAAEALALRLLFEDQGIPLTEDMFAQYKEINQGLWRAYEEGKITKDEVVNTRFSALLKEYNTEAD 80 (224)
T ss_pred CCEEEEcCcCcccccchHHHHHHHHHHHHhCCCccHHHHHHHHHHhHHHHHHHHcCCCCHHHHHHHHHHHHHHHhCCCCc
Confidence 5899999999999999988888999999888775443322111110 01 112223333433221
Q ss_pred HHHHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCC
Q 023109 72 KHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (287)
Q Consensus 72 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~ 150 (287)
.+.+. +.+.... ...+++||+.++|+.++++ ++++++||++...++..+ +.+++..+||.++++++.+..||+
T Consensus 81 ~~~~~----~~~~~~~~~~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l-~~~~l~~~fd~i~~~~~~~~~KP~ 154 (224)
T TIGR02254 81 EALLN----QKYLRFLEEGHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRL-RKSGLFPFFDDIFVSEDAGIQKPD 154 (224)
T ss_pred HHHHH----HHHHHHHhccCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHH-HHCCcHhhcCEEEEcCccCCCCCC
Confidence 11222 2222222 2467899999999999999 999999999999999888 889999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 151 PDIFLEAAKRL-NMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 151 ~~~~~~~~~~l-~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
|++|.++++++ ++.|++|+||||+. +|+.+|+++|+.+++++.+.........+++++.++.++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 222 (224)
T TIGR02254 155 KEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIRSLEELYE 222 (224)
T ss_pred HHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEECCHHHHHh
Confidence 99999999999 99999999999998 79999999999999998754443334567889999888754
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=197.61 Aligned_cols=200 Identities=22% Similarity=0.335 Sum_probs=147.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHH--hCCC-----------HHHH----HHHHHHHhCCCC
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI--VGKT-----------PLEE----AAIIVEDYGLPC 70 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~-----------~~~~----~~~~~~~~~~~~ 70 (287)
++|+|+||+||||+|.+. ..+++++++.+|...+.+....+ .+.+ ..+. +..+...++.
T Consensus 2 ~~k~iiFDlDGTLid~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 77 (224)
T PRK09449 2 KYDWILFDADETLFHFDA--FAGLQRMFSRYGVDFTAEDFQDYQAVNKPLWVDYQNGAITALQLQHTRFESWAEKLNV-- 77 (224)
T ss_pred CccEEEEcCCCchhcchh--hHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCC--
Confidence 589999999999998643 46778888888887655444332 1111 1100 1112222221
Q ss_pred CHHHHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCC
Q 023109 71 AKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp 149 (287)
....+. +.+...+ ...+++||+.++|+.|+ +|++++++||++...++..+ +++|+..+||.++++++.+..||
T Consensus 78 ~~~~~~----~~~~~~~~~~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP 151 (224)
T PRK09449 78 TPGELN----SAFLNAMAEICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRL-ERTGLRDYFDLLVISEQVGVAKP 151 (224)
T ss_pred CHHHHH----HHHHHHHhhcCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHH-HhCChHHHcCEEEEECccCCCCC
Confidence 122222 2222222 24678999999999999 57999999999999999889 88999999999999999999999
Q ss_pred CHHHHHHHHHHcCCCC-CcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 150 SPDIFLEAAKRLNMEP-SSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~-~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
+|++|.++++++|+.+ ++|+||||+. +|+.+|+++|+.+++++.+.........++++++++.++...
T Consensus 152 ~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~ 221 (224)
T PRK09449 152 DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSSLSELEQL 221 (224)
T ss_pred CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECCHHHHHHH
Confidence 9999999999999854 7999999998 699999999999999986432222233578999999887643
|
|
| >KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-27 Score=188.45 Aligned_cols=214 Identities=37% Similarity=0.580 Sum_probs=190.4
Q ss_pred CccccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH
Q 023109 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS 81 (287)
Q Consensus 2 ~~~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (287)
+..+...+.+++||+||||+|++..+..+++..+.++|..+++.......|+...++.+.++..++.+.+.+++..+..+
T Consensus 3 ~~~~~~~~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~~dp~s~ee~~~e~~~ 82 (222)
T KOG2914|consen 3 SKSLSLKVSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKLPDPVSREEFNKEEEE 82 (222)
T ss_pred ccccccceeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhcCCCCCHHHHHHHHHH
Confidence 34445567899999999999999999999999999999999999889999999999999999888889999999999999
Q ss_pred HHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeec--cCCcCCCCCCHHHHHHHHH
Q 023109 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG--SDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~--~~~~~~~kp~~~~~~~~~~ 159 (287)
...+.+....+.||+.+++++|+..|++++++|++++..++.++..+.++...|+.++. ..++..+||+|++|..+++
T Consensus 83 ~~~~~~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~ 162 (222)
T KOG2914|consen 83 ILDRLFMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAK 162 (222)
T ss_pred HHHHhccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHH
Confidence 99988889999999999999999999999999999999999999555457777888777 5578889999999999999
Q ss_pred HcCCCC-CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 160 RLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 160 ~l~~~~-~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
++|.+| +.|++|+|++..+.++++||+.++++++..........++.+++++.++.
T Consensus 163 ~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~~~~~~~~~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 163 RLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVATPDLSNLFSAGATLILESLEDFK 219 (222)
T ss_pred hcCCCCccceEEECCCHHHHHHHHhcCCeEEEecCCCcchhhhhccceecccccccC
Confidence 999999 99999999999999999999999999994444444677788888777654
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-28 Score=216.06 Aligned_cols=207 Identities=15% Similarity=0.204 Sum_probs=164.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcC------CCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYG------KEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVY 80 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
+|+++|+||+||||+|+...+..++++++++++ ...+.+.+....|.+..+.+..+....+.+ ..++....+.
T Consensus 239 ~m~k~vIFDlDGTLiDs~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~~~~~-~~~~~~~~~~ 317 (459)
T PRK06698 239 EMLQALIFDMDGTLFQTDKILELSLDDTFDHLRSLQLWDTVTPIDKYREIMGVPLPKVWEALLPDHSLE-IREQTDAYFL 317 (459)
T ss_pred HhhhheeEccCCceecchhHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHcCCChHHHHHHHhhhcchh-HHHHHHHHHH
Confidence 357999999999999999999999999998874 223456667788888888777776554322 1222333333
Q ss_pred HHHHhhh--ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHH
Q 023109 81 SMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 81 ~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
+.+.... ...+++||+.++|+.|+++|++++|+||++...++..+ +++|+..+|+.++++++.. .||+|+.+..++
T Consensus 318 ~~~~~~~~~~~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l-~~~~l~~~f~~i~~~d~v~-~~~kP~~~~~al 395 (459)
T PRK06698 318 ERLIENIKSGKGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIV-SYYDLDQWVTETFSIEQIN-SLNKSDLVKSIL 395 (459)
T ss_pred HHhHHHHhhcCCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHCCcHhhcceeEecCCCC-CCCCcHHHHHHH
Confidence 3333322 25688999999999999999999999999999999999 8999999999999998774 467888999999
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
+.++ |++|++|||+++|+.+|+++|+.++++..+.........++++++++.++...+
T Consensus 396 ~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l 453 (459)
T PRK06698 396 NKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVIDDLLELKGIL 453 (459)
T ss_pred HhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHH
Confidence 8864 789999999999999999999999999886544444456899999998886543
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-27 Score=192.59 Aligned_cols=201 Identities=40% Similarity=0.669 Sum_probs=163.9
Q ss_pred cCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCC--CHHHHHHHHHHHHHhhhccCCCC
Q 023109 16 LDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEFVNEVYSMFSDHLCKVKAL 93 (287)
Q Consensus 16 lDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (287)
+||||+|+...+..+++.+++++|...+.+......|.+....+..+....+.+. ..+.+.......+.......+++
T Consensus 1 ~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (220)
T PLN02811 1 MDGLLLDTEKFYTEVQEKILARYGKTFDWSLKAKMMGKKAIEAARIFVEESGLSDSLSPEDFLVEREAMLQDLFPTSDLM 80 (220)
T ss_pred CCCcceecHHHHHHHHHHHHHHcCCCCCHHHHHHccCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhhCCCC
Confidence 6999999999999999999999999877776777888888877777777766542 33444444444444434467889
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC--CcCCCCCCHHHHHHHHHHcC---CCCCcE
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLN---MEPSSS 168 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~--~~~~~kp~~~~~~~~~~~l~---~~~~~~ 168 (287)
||+.++|+.|+++|++++++||+........+.++.++.++|+.+++++ +++..||+|+.|..++++++ +.|++|
T Consensus 81 ~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~ 160 (220)
T PLN02811 81 PGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGPVDPGKV 160 (220)
T ss_pred ccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCCCCccce
Confidence 9999999999999999999999987766555535557888999999999 88889999999999999997 999999
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
+||||+..|+.+|+++|++++++..+.........+++++.++.++..
T Consensus 161 v~IgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~d~vi~~~~e~~~ 208 (220)
T PLN02811 161 LVFEDAPSGVEAAKNAGMSVVMVPDPRLDKSYCKGADQVLSSLLDFKP 208 (220)
T ss_pred EEEeccHhhHHHHHHCCCeEEEEeCCCCcHhhhhchhhHhcCHhhCCH
Confidence 999999999999999999999998755433334577889999988643
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-26 Score=196.59 Aligned_cols=208 Identities=26% Similarity=0.433 Sum_probs=153.7
Q ss_pred CCccEEEEecCCcccccH-HHHHHHHHHHHHHcCC-C--CCHHHHHHH--hCCCHHHHHHHHHHHhCCC--------CCH
Q 023109 7 KLMSCVILDLDGTLLNTD-GMFSEVLKTFLVKYGK-E--WDGREKHKI--VGKTPLEEAAIIVEDYGLP--------CAK 72 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~-~~~~~~~~~~~~~~g~-~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--------~~~ 72 (287)
..+++|+||+||||+|+. ..+..+++++++++|. . ++...+... .+.+.......+ ...+.+ .+.
T Consensus 38 ~~~k~VIFDlDGTLvDS~~~~~~~a~~~~l~~~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 116 (286)
T PLN02779 38 ALPEALLFDCDGVLVETERDGHRVAFNDAFKEFGLRPVEWDVELYDELLNIGGGKERMTWYF-NENGWPTSTIEKAPKDE 116 (286)
T ss_pred cCCcEEEEeCceeEEccccHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHccCCChHHHHHHH-HHcCCCccccccCCccc
Confidence 357999999999999999 9999999999999998 3 233332222 444443333222 222211 011
Q ss_pred ---HH----HHHHHHHHHHhhhc--cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC---Cccccceeec
Q 023109 73 ---HE----FVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVG 140 (287)
Q Consensus 73 ---~~----~~~~~~~~~~~~~~--~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~g---l~~~fd~i~~ 140 (287)
++ +.......+.+... .++++||+.++|+.++++|++++|+||++...+...+ ++.+ +...|+.+ +
T Consensus 117 e~~~~~~~~~~~~~~~~y~~~~~~~~~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l-~~~~~~~~~~~~~~v-~ 194 (286)
T PLN02779 117 EERKELVDSLHDRKTELFKELIESGALPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIV-NTLLGPERAQGLDVF-A 194 (286)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhcCCCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhccccccCceEEE-e
Confidence 11 22222233433332 3589999999999999999999999999999888888 5543 23334544 7
Q ss_pred cCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 141 ~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
++++...||+|+.|.++++.+|++|++|+||||+.+|+.+|+++|+.++++..+.........++++++++.++...
T Consensus 195 ~~~~~~~KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~~~l~~~ 271 (286)
T PLN02779 195 GDDVPKKKPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCLGDVPLE 271 (286)
T ss_pred ccccCCCCCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECChhhcchh
Confidence 77788899999999999999999999999999999999999999999999988655444345789999999998654
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=188.94 Aligned_cols=180 Identities=18% Similarity=0.317 Sum_probs=135.4
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH-------HH--HHHHhCC--CH----HHHHHHHHHHhCCCCCHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-------RE--KHKIVGK--TP----LEEAAIIVEDYGLPCAKH 73 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-------~~--~~~~~~~--~~----~~~~~~~~~~~~~~~~~~ 73 (287)
+|+|+||+||||+|+... ...+.+.+...+..... .. .....+. +. ...+..++..++.+....
T Consensus 1 ik~viFD~dgTLiD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~ 79 (198)
T TIGR01428 1 IKALVFDVYGTLFDVHSV-VERFAELYGGRGEALSQLWRQKQLEYSWLRTLMGPYADFWDLTREALRYLLGRLGLEDDES 79 (198)
T ss_pred CcEEEEeCCCcCccHHHH-HHHHHHHhCchHHHHHHHHHHHHHHHHHHHHccCCCcCHHHHHHHHHHHHHHHcCCCCCHH
Confidence 578999999999999864 33444433322211110 00 0011121 11 233455666666553322
Q ss_pred HHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHH
Q 023109 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~ 153 (287)
. . +.+.+.+...+++||+.++|++|+++|++++++||++...++..+ +++|+..+|+.++++++++..||+|+.
T Consensus 80 ~-~----~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~KP~~~~ 153 (198)
T TIGR01428 80 A-A----DRLAEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLV-KHAGLDDPFDAVLSADAVRAYKPAPQV 153 (198)
T ss_pred H-H----HHHHHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHCCChhhhheeEehhhcCCCCCCHHH
Confidence 1 2 223333456788999999999999999999999999999999999 889999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
|..+++.+|++|++|++|||+.+|+.+|+++|+.+++++...
T Consensus 154 ~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~ 195 (198)
T TIGR01428 154 YQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG 195 (198)
T ss_pred HHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence 999999999999999999999999999999999999998843
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=221.74 Aligned_cols=208 Identities=25% Similarity=0.367 Sum_probs=174.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (287)
.++++|+||+||||+|+...+..+++++++++|.+++.+.+....+.+..+.+..+...++.+ ...++..+.+.+.+.+
T Consensus 73 ~~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 152 (1057)
T PLN02919 73 GKVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLE 152 (1057)
T ss_pred CCCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999988877777888888777766666555542 2334444444444433
Q ss_pred hhc---cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-cccceeeccCCcCCCCCCHHHHHHHHHHc
Q 023109 86 HLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (287)
Q Consensus 86 ~~~---~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~-~~fd~i~~~~~~~~~kp~~~~~~~~~~~l 161 (287)
.+. ...++||+.++|++|+++|++++|+||+....++..+ +++|+. .+|+.+++++++...||+|++|.++++++
T Consensus 153 ~~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L-~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~l 231 (1057)
T PLN02919 153 KYAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANL-AAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKIL 231 (1057)
T ss_pred HhhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-HHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHc
Confidence 321 2347899999999999999999999999999999999 888996 78999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-ccCCcEEeCCccCcC
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~~a~~v~~~l~el~ 215 (287)
++.|++|+||||+..|+++|+++|+.++++..+....+. ...++++++++.++.
T Consensus 232 gv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~ 286 (1057)
T PLN02919 232 GVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNIS 286 (1057)
T ss_pred CcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCC
Confidence 999999999999999999999999999999987544333 457789999999984
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-27 Score=184.31 Aligned_cols=175 Identities=31% Similarity=0.531 Sum_probs=148.3
Q ss_pred EEEecCCcccccHHHHHHHHHH-HHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 023109 12 VILDLDGTLLNTDGMFSEVLKT-FLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (287)
Q Consensus 12 iifDlDGTL~d~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (287)
|+||+||||+++...+..++.. +.+.++........+...+.+..+.+..++...+.+ ...+.+.+.+. ......
T Consensus 1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~ 76 (176)
T PF13419_consen 1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGID--PEEIQELFREY--NLESKL 76 (176)
T ss_dssp EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH--HHHHHHHHHHH--HHHGGE
T ss_pred cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchh--HHHHHHHhhhh--hhhhcc
Confidence 7999999999999888788876 577888776666777777777777787777766532 22233333222 112578
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
+++||+.++|+.++++|++++++||++...++..+ +.+|+..+|+.++++++.+..||+++.|+.+++.++++|++|++
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l-~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~~~~ 155 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVL-ERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEEILF 155 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHH-HHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGGEEE
T ss_pred chhhhhhhhhhhcccccceeEEeecCCcccccccc-cccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcceEEE
Confidence 89999999999999999999999999999999999 88999999999999999999999999999999999999999999
Q ss_pred EeCCHhhHHHHHHcCCeEEEE
Q 023109 171 IEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~i~v 191 (287)
|||+..|+.+|+++|+.++++
T Consensus 156 vgD~~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 156 VGDSPSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EESSHHHHHHHHHTTSEEEEE
T ss_pred EeCCHHHHHHHHHcCCeEEeC
Confidence 999999999999999999975
|
... |
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=189.12 Aligned_cols=125 Identities=16% Similarity=0.208 Sum_probs=106.7
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
....++||+.++|+.|+++|++++++||++...++..+ +++|+..+|+.++++++.+..||+|+.|.++++++|++|++
T Consensus 90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKL-EHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHH-HHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 46789999999999999999999999999999999888 88999999999999999999999999999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeE-EEECCCCCccccccCCcEEeCCccCcC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~-i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
|+||||++.|+.+|+++|+.+ +++..+..... ..+..+.+++.++.
T Consensus 169 ~l~igDs~~di~aA~~aG~~~~~~v~~~~~~~~--~~~~~~~~~~~~~~ 215 (224)
T PRK14988 169 TLFIDDSEPILDAAAQFGIRYCLGVTNPDSGIA--EKQYQRHPSLNDYR 215 (224)
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEEEeCCCCCcc--chhccCCCcHHHHH
Confidence 999999999999999999985 55666433322 23333345554443
|
|
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-26 Score=185.40 Aligned_cols=178 Identities=28% Similarity=0.352 Sum_probs=137.1
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHH------------------hCCCHHHH----HHHHHHHhC
Q 023109 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDYG 67 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~~ 67 (287)
|+|+||+||||+|+...+..+++++++++|.+......... .+.+..+. +...+...+
T Consensus 1 k~viFDlDGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 80 (203)
T TIGR02252 1 KLITFDAVGTLLALKEPVGEVYCEIARKYGVEVSPDELEQAFRRAFKAMSEAFPNFGFSSGLTPQQWWQKLVRDTFGRAG 80 (203)
T ss_pred CeEEEecCCceeeeCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 58999999999999888889999999999998765432111 13343322 233333333
Q ss_pred CCCCHHHHHHHHHHHHHhhh--ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC
Q 023109 68 LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (287)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~ 145 (287)
.+ ..+.+...+...+.... ....++||+.++|+.|+++|++++++||++.. ....+ +++|+..+|+.++++++.+
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l-~~~~l~~~fd~i~~s~~~~ 157 (203)
T TIGR02252 81 VP-DPESFEKIFEELYSYFATPEPWQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLL-EALGLLEYFDFVVTSYEVG 157 (203)
T ss_pred CC-CchhHHHHHHHHHHHhcCCCcceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHH-HHCCcHHhcceEEeecccC
Confidence 21 22333333333322211 24578999999999999999999999998875 46678 8889999999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEE
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA 190 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~ 190 (287)
..||+|+.|.++++.+|++|++|++|||+. +|+.+|+++|+.+++
T Consensus 158 ~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 158 AEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred CCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeeeC
Confidence 999999999999999999999999999998 899999999999874
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=190.99 Aligned_cols=204 Identities=16% Similarity=0.205 Sum_probs=145.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCC------CCHHHHH---HHhCC-------C----HHHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE------WDGREKH---KIVGK-------T----PLEEAAIIVED 65 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~------~~~~~~~---~~~~~-------~----~~~~~~~~~~~ 65 (287)
+.++|+|+||+||||+|+...+..+++++++..+.. +...... ...+. . ....+..++..
T Consensus 7 ~~~~k~iiFDlDGTL~D~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 86 (238)
T PRK10748 7 LGRISALTFDLDDTLYDNRPVILRTEQEALAFVQNYHPALRSFQNEDLQRLRQALREAEPEIYHDVTRWRWRAIEQAMLD 86 (238)
T ss_pred CCCceeEEEcCcccccCChHHHHHHHHHHHHHHHHhCcchhhCCHHHHHHHHHHHHHhCchhhCcHHHHHHHHHHHHHHH
Confidence 346799999999999999988888888777654211 1111111 11000 0 11233445566
Q ss_pred hCCCCCHH-HHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc
Q 023109 66 YGLPCAKH-EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (287)
Q Consensus 66 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~ 144 (287)
++.+.... .........+........++||+.++|++|++. ++++++||++.. + ++.|+..+|+.++++++.
T Consensus 87 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~-~~~gl~~~fd~i~~~~~~ 159 (238)
T PRK10748 87 AGLSAEEASAGADAAMINFAKWRSRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----P-ELFGLGDYFEFVLRAGPH 159 (238)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----H-HHCCcHHhhceeEecccC
Confidence 66542211 111222223333234578999999999999875 999999998765 3 668999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcc----ccccCCcEEeCCccCcCc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT----HRYTAADEVINSLLDLRP 216 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~----~~~~~a~~v~~~l~el~~ 216 (287)
+..||+|+.|.++++++|++|++|+||||++ .|+.+|+++|+.+++++.+.... .....++..+.++.++..
T Consensus 160 ~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~~ 236 (238)
T PRK10748 160 GRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWDSRLLPHIEISRLASLTS 236 (238)
T ss_pred CcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccccccCCCCEEECCHHHHHh
Confidence 9999999999999999999999999999995 99999999999999998743221 112457888888887754
|
|
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.7e-25 Score=176.00 Aligned_cols=173 Identities=16% Similarity=0.231 Sum_probs=134.3
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcC-CCCCHHHHHHHhCCCHH--------HHHHHHHHHhC-----CCCCHHHH
Q 023109 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYG-KEWDGREKHKIVGKTPL--------EEAAIIVEDYG-----LPCAKHEF 75 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~ 75 (287)
++|+||+||||+|+...+..+++.+++++| ...+.+.+....+.+.. ..+...+.... .....+.+
T Consensus 1 ~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
T TIGR01548 1 QALVLDMDGVMADVSQSYRRAIIDTVEHFGGVSVTHADIDHTKLAGNANNDWQLTHRLVVDGLNSASSERVRDAPTLEAV 80 (197)
T ss_pred CceEEecCceEEechHHHHHHHHHHHHHHcCCCCCHHHHHHHHHccCccCchHHHHHHHHHhhhcccchhccCCccHHHH
Confidence 368999999999999999999999999997 56666666666664321 11112221110 11234455
Q ss_pred HHHHHHHHHhhh----------ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC
Q 023109 76 VNEVYSMFSDHL----------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (287)
Q Consensus 76 ~~~~~~~~~~~~----------~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~ 145 (287)
...+.+.+.... ....+.+++.++|+.|+++|++++++||++...++..+ +.+|+..+|+.++++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~ 159 (197)
T TIGR01548 81 TAQFQALYQGVGYYRDLATLGLIEDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFL-TTHGLEILFPVQIWMEDCP 159 (197)
T ss_pred HHHHHHHHcCCcccccccchhhhccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHH-HHcCchhhCCEEEeecCCC
Confidence 555555544321 12244566799999999999999999999999999999 8999999999999999887
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~a 184 (287)
. ||+|+.+.++++++|++|++|++|||+.+|+.+|+++
T Consensus 160 ~-KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 160 P-KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred C-CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 7 9999999999999999999999999999999999875
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.2e-24 Score=171.34 Aligned_cols=175 Identities=30% Similarity=0.436 Sum_probs=125.4
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHH------HHHHHH
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNE------VYSMFS 84 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 84 (287)
+++||+||||++++..+..... ................ .......+.+...++.......+... ....+.
T Consensus 1 ~vlFDlDgtLv~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (183)
T TIGR01509 1 AILFDLDGVLVDTSSAIEKLVN---REEFPLVPDELGVSAV-GKLELALRRWKEKYGRTMSAEDFYLLYENADIKQLFYD 76 (183)
T ss_pred CeeeccCCceechHHHHHHHHH---HHhCCCCcHHHHHHHH-HHHHHHhhccccccCCCCCcHHHHHHHhHHHHHHHHHH
Confidence 4899999999999887655211 2222222222221111 11222223333334443333333222 222232
Q ss_pred hhhcc--CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 85 DHLCK--VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 85 ~~~~~--~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
..... .+++||+.++|+.++++|++++++||++... .... .++|+..+|+.++++++.+..||+|+.|..+++.++
T Consensus 77 ~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~ 154 (183)
T TIGR01509 77 AILDEEKLKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLV-QELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLG 154 (183)
T ss_pred HHHhccCCccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHH-HhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcC
Confidence 22233 6899999999999999999999999999888 5555 668999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEE
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
++|++|++|||++.|+.+|+++|+.++++
T Consensus 155 ~~~~~~~~vgD~~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 155 LKPEECLFVDDSPAGIEAAKAAGMHTVLV 183 (183)
T ss_pred CCcceEEEEcCCHHHHHHHHHcCCEEEeC
Confidence 99999999999999999999999999864
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=176.60 Aligned_cols=179 Identities=21% Similarity=0.217 Sum_probs=125.1
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-----
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF----- 83 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 83 (287)
+|+|+||+||||+|+.. ....+.......|.+ .........+.+.....+.+. .+ ..+.+++...+.+.+
T Consensus 2 ik~viFDldGtL~d~~~-~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~--~g-~~~~~~~~~~~~~~~~~~~~ 76 (211)
T TIGR02247 2 IKAVIFDFGGVLLPSPG-VMRRWETERGLPGLK-DFIVTVNITGPDFNPWARTFE--RG-ELTAEAFDGLFRHEYGLRLG 76 (211)
T ss_pred ceEEEEecCCceecCHH-HHHHHHHHcCCCCCc-cHHHHHHhcCCCCChHHHHHH--cC-CCCHHHHHHHHHHHhccccC
Confidence 57999999999999966 545555444334443 222222333333222222111 11 112222322222221
Q ss_pred ---------Hhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH--HHHHHHhhcCCccccceeeccCCcCCCCCCH
Q 023109 84 ---------SDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (287)
Q Consensus 84 ---------~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~--~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~ 151 (287)
.... ...+++||+.++|+.|+++|++++++||+.... ....+ ...++..+||.++++++.+..||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~-~~~~l~~~fd~v~~s~~~~~~KP~p 155 (211)
T TIGR02247 77 HDVRIAPVFPLLYGENTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEAL-LPGDIMALFDAVVESCLEGLRKPDP 155 (211)
T ss_pred CCcCchhhHHHHhccccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHh-hhhhhHhhCCEEEEeeecCCCCCCH
Confidence 1111 246789999999999999999999999986543 22233 4457888999999999988899999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
+.|..+++++|++|++|+||||+..|+.+|+++|+.++++..
T Consensus 156 ~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~~ 197 (211)
T TIGR02247 156 RIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVSD 197 (211)
T ss_pred HHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEECC
Confidence 999999999999999999999999999999999999999976
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-24 Score=178.57 Aligned_cols=127 Identities=28% Similarity=0.381 Sum_probs=113.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
..++.|++.+.|+.++++ ++++++||+....+..++ ..+|+.++||.++.|++.+..||+|++|..+++.+|++|+++
T Consensus 97 ~~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l-~~~gl~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~ 174 (229)
T COG1011 97 LLPDYPEALEALKELGKK-YKLGILTNGARPHQERKL-RQLGLLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEA 174 (229)
T ss_pred hCccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHH-HHcCChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcceE
Confidence 478999999999999999 999999999999999999 888999999999999999999999999999999999999999
Q ss_pred EEEeCCH-hhHHHHHHcCCeEEEECCCCCcc-ccccCCcEEeCCccCcCcc
Q 023109 169 LVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 169 l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~-~~~~~a~~v~~~l~el~~~ 217 (287)
+||||+. ||+.+|+++|+++++++.+.... +....+++.+.++.++...
T Consensus 175 l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~ 225 (229)
T COG1011 175 LFVGDSLENDILGARALGMKTVWINRGGKPLPDALEAPDYEISSLAELLDL 225 (229)
T ss_pred EEECCChhhhhHHHHhcCcEEEEECCCCCCCCCCccCCceEEcCHHHHHHH
Confidence 9999999 78899999999999999854322 1225678888888877654
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.6e-24 Score=172.37 Aligned_cols=176 Identities=15% Similarity=0.153 Sum_probs=130.8
Q ss_pred cEEEEecCCcccccHHHHH-HHHHHHHHHcCCCC---------CHHHHHHHhC-CCHHHHHHHHHHHhCCCCCHHHHHHH
Q 023109 10 SCVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEW---------DGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNE 78 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~-~~~~~~~~~~g~~~---------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (287)
.+|+||+||||++.+.... ..+.. ..+... .........| .+..+....+...++.+...+.+...
T Consensus 1 ~~viFDldgvL~d~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (199)
T PRK09456 1 MLYIFDLGNVIVDIDFNRVLGVWSD---LSRVPLATLKKRFTMGEAFHQHERGEISDEAFAEALCHEMALSLSYEQFAHG 77 (199)
T ss_pred CEEEEeCCCccccCcHHHHHHHHHH---hcCCCHHHHHHHHhcCcHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 3799999999999854211 11111 111110 0011112223 45566667777777765554555444
Q ss_pred HHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHH
Q 023109 79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
+.+.+ .+++||+.++|+.++++|++++++||++.......+....++..+|+.++++++++..||+|+.|..++
T Consensus 78 ~~~~~------~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~ 151 (199)
T PRK09456 78 WQAVF------VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVL 151 (199)
T ss_pred HHHHH------hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHH
Confidence 43322 357999999999999999999999999988776655233478888999999999999999999999999
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+++|++|++|+||||+..|+.+|+++|+.++++..+
T Consensus 152 ~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~ 187 (199)
T PRK09456 152 QAEGFSAADAVFFDDNADNIEAANALGITSILVTDK 187 (199)
T ss_pred HHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCC
Confidence 999999999999999999999999999999999874
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-24 Score=168.35 Aligned_cols=170 Identities=21% Similarity=0.257 Sum_probs=125.1
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHH-----HcCCCCCHHH-HH----HHhCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 023109 10 SCVILDLDGTLLNTDGMFSEVLKTFLV-----KYGKEWDGRE-KH----KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~~~~~~~~~-----~~g~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (287)
++|+||+||||+|+...+...+++.+. ++|.+..... .. ...|..... ...... ...+.+...+
T Consensus 1 ~~viFDlDGTL~ds~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~g~~~~~----~~~~~~--~~~~~~~~~~ 74 (184)
T TIGR01993 1 DVWFFDLDNTLYPHSAGIFLQIDRNITEFVAARLKLSEEEARVLRKDYYREYGTTLAG----LMILHE--IDADEYLRYV 74 (184)
T ss_pred CeEEEeCCCCCCCCcccHHHHHHHHHHHHHHHHcCcCHHHHHHHHHHHHHHHchHHHH----HHHhhC--CCHHHHHHHH
Confidence 479999999999997777777766543 4455432211 11 112221111 222222 2233333222
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCC----CCCCHHHHH
Q 023109 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----GKPSPDIFL 155 (287)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~----~kp~~~~~~ 155 (287)
.+. ......++++|+.++|+.|+ .+++++||++...+...+ +.+|+..+|+.++++++.+. .||+|+.|.
T Consensus 75 ~~~--~~~~~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~ 148 (184)
T TIGR01993 75 HGR--LPYEKLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRAL-NRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYE 148 (184)
T ss_pred hcc--CCHHhCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHH-HHcCcHhhhCeEEEeecccCccCCCCCCHHHHH
Confidence 221 11235678999999999997 479999999999999999 88899999999999988876 599999999
Q ss_pred HHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEE
Q 023109 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 156 ~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
.+++++|+.|++|++|||+..|+.+|+++|++++++
T Consensus 149 ~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 149 KALREAGVDPERAIFFDDSARNIAAAKALGMKTVLV 184 (184)
T ss_pred HHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEeeC
Confidence 999999999999999999999999999999999864
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.4e-23 Score=167.36 Aligned_cols=188 Identities=14% Similarity=0.179 Sum_probs=127.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-h
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-H 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 86 (287)
|+|+|+||+||||+|+. ..+..+++++|.+. +......+.......... ++. +.....+.+...... .
T Consensus 1 m~k~viFDlDGTLiD~~----~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~ 69 (197)
T PHA02597 1 MKPTILTDVDGVLLSWQ----SGLPYFAQKYNIPT--DHILKMIQDERFRDPGEL---FGC--DQELAKKLIEKYNNSDF 69 (197)
T ss_pred CCcEEEEecCCceEchh----hccHHHHHhcCCCH--HHHHHHHhHhhhcCHHHH---hcc--cHHHHHHHhhhhhHHHH
Confidence 37899999999999954 34567777888653 343344443322222222 221 222222222222212 2
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc----ccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE----SFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~----~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
.....++||+.++|+.|++. ++++++||.+........ .++++.. +|+.+++++. .||+|+.+..+++++|
T Consensus 70 ~~~~~~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~-~~~~l~~~f~~~f~~i~~~~~---~~~kp~~~~~a~~~~~ 144 (197)
T PHA02597 70 IRYLSAYDDALDVINKLKED-YDFVAVTALGDSIDALLN-RQFNLNALFPGAFSEVLMCGH---DESKEKLFIKAKEKYG 144 (197)
T ss_pred HHhccCCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHH-hhCCHHHhCCCcccEEEEecc---CcccHHHHHHHHHHhC
Confidence 24577999999999999987 478888887766555455 6666654 4566776665 3677899999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHc--CCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~a--G~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
|++++||||+..|+.+|+++ |+++++++.+.. .....+++.+.++.|+.
T Consensus 145 --~~~~v~vgDs~~di~aA~~a~~Gi~~i~~~~~~~--~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 145 --DRVVCFVDDLAHNLDAAHEALSQLPVIHMLRGER--DHIPKLAHRVKSWNDIE 195 (197)
T ss_pred --CCcEEEeCCCHHHHHHHHHHHcCCcEEEecchhh--ccccchhhhhccHHHHh
Confidence 88999999999999999999 999999988753 22234467777777664
|
2 hypothetical protein; Provisional |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.9e-23 Score=157.58 Aligned_cols=154 Identities=25% Similarity=0.414 Sum_probs=120.9
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhccC
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKV 90 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (287)
+|+||+||||+|+...+..+++.++++++. +.+.+....|...... ..... ..+++ .......
T Consensus 1 ~iifD~DGTL~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~-~~~~~------~~~~~--------~~~~~~~ 63 (154)
T TIGR01549 1 AILFDIDGTLVDSSFAIRRAFEETLEEFGE--DFQALKALRGLAEELL-YRIAT------SFEEL--------LGYDAEE 63 (154)
T ss_pred CeEecCCCcccccHHHHHHHHHHHHHHhcc--cHHHHHHHHccChHHH-HHHHH------HHHHH--------hCcchhh
Confidence 489999999999998999999999998875 3333333333322211 11111 01111 1111345
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
...||+.++|+.|+++|++++++||++...+...+ +++ +..+|+.++++++.. .||+|+.+.+++++++++| +|+|
T Consensus 64 ~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l~ 139 (154)
T TIGR01549 64 AYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLL-RKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVLH 139 (154)
T ss_pred eeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHH-HHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEEE
Confidence 66799999999999999999999999999999888 665 778899999998887 9999999999999999999 9999
Q ss_pred EeCCHhhHHHHHHcC
Q 023109 171 IEDSVIGVVAGKAAG 185 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG 185 (287)
|||+..|+.+|+++|
T Consensus 140 iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 140 VGDNLNDIEGARNAG 154 (154)
T ss_pred EeCCHHHHHHHHHcc
Confidence 999999999999987
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.3e-23 Score=163.48 Aligned_cols=161 Identities=18% Similarity=0.295 Sum_probs=123.5
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCC---CC-----HHHHHHHhC--CCHHH----HHHHHHHHhCCCCCHHHHH
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE---WD-----GREKHKIVG--KTPLE----EAAIIVEDYGLPCAKHEFV 76 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~---~~-----~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~ 76 (287)
+|+||+||||+|+...+..+++.++++.+.. +. ........+ ....+ .+..+...++.+...+ .
T Consensus 1 ~viFD~DGTL~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~- 78 (175)
T TIGR01493 1 AMVFDVYGTLVDVHGGVRACLAAIAPEGGAFSDLWRAKQQEYSWRRSLMGDRRAFPEDTVRALRYIADRLGLDAEPK-Y- 78 (175)
T ss_pred CeEEecCCcCcccHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHHHcCCCCCHH-H-
Confidence 5899999999999988888888777664421 11 111112222 11122 4566677777654332 2
Q ss_pred HHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHH
Q 023109 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (287)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~ 156 (287)
.+.+...+...+++||+.++|+ +++++||++...++..+ +++|+..+|+.++++++++..||+|+.|..
T Consensus 79 ---~~~~~~~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l-~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~ 147 (175)
T TIGR01493 79 ---GERLRDAYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFA-QQAGLPWYFDRAFSVDTVRAYKPDPVVYEL 147 (175)
T ss_pred ---HHHHHHHHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHH-HHCCCHHHHhhhccHhhcCCCCCCHHHHHH
Confidence 2333333456789999999998 38899999999999999 889999999999999998999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHc
Q 023109 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~~Dv~~a~~a 184 (287)
+++++|++|++|+||||+..|+.+|+++
T Consensus 148 ~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 148 VFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 9999999999999999999999999864
|
The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=99.90 E-value=8e-23 Score=167.08 Aligned_cols=189 Identities=19% Similarity=0.190 Sum_probs=128.9
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-HHH-hC-CCHHHHHHHHHHHhCCCCCHHHHHHHHH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVY 80 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
++++++++++||+||||++++. +.++++.+|........ ... .+ ....+........+.. ...+
T Consensus 9 ~~~~~~k~iiFD~DGTL~~~~~-----~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~------- 75 (219)
T TIGR00338 9 PLLRSKKLVVFDMDSTLINAET-----IDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALLKG-LPVE------- 75 (219)
T ss_pred hhhccCCEEEEeCcccCCCchH-----HHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHhCC-CCHH-------
Confidence 4566789999999999999853 44556666654222211 111 11 1222222222222211 1111
Q ss_pred HHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeec-------cC---CcCCCCCC
Q 023109 81 SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG-------SD---EVRTGKPS 150 (287)
Q Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~-------~~---~~~~~kp~ 150 (287)
.+.......++.||+.++++.++++|++++++|++....++..+ +.+|+..+|+..+. +. .....+|+
T Consensus 76 -~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 153 (219)
T TIGR00338 76 -LLKEVRENLPLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVK-DKLGLDAAFANRLEVEDGKLTGLVEGPIVDASYK 153 (219)
T ss_pred -HHHHHHhcCCcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceEeeEEEEECCEEEEEecCcccCCccc
Confidence 12222345679999999999999999999999999999999888 88898887753221 11 12235678
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
+..++++++++++++++|+||||+.+|+++++.+|+.+++ +. .+.....+++++.+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~-~~---~~~~~~~a~~~i~~~ 210 (219)
T TIGR00338 154 GKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAF-NA---KPKLQQKADICINKK 210 (219)
T ss_pred HHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEe-CC---CHHHHHhchhccCCC
Confidence 9999999999999999999999999999999999998754 32 234455677776643
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=6.4e-22 Score=158.69 Aligned_cols=188 Identities=26% Similarity=0.272 Sum_probs=140.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHH------------------hC-CCHHHHHHHHHHHh
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VG-KTPLEEAAIIVEDY 66 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~-~~~~~~~~~~~~~~ 66 (287)
.+++|+|+||++|||+.+.......+..+.+.+|++.+....... .+ .+..++...+....
T Consensus 4 ~~~iravtfD~~~tLl~~~~~~~~~y~~i~~~~gl~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~l~~~~ww~~lv~~~ 83 (237)
T KOG3085|consen 4 LMRIRAVTFDAGGTLLATLPPVMEVYCEIAEAYGLEYDDSLIETIFRKDFKKMSEKGPFFGLYSGELTLSQWWPKLVEST 83 (237)
T ss_pred ccceEEEEEeCCCceeecCCccHHHHHHHHHHhCCCCCHHHHhHhhhHHHHhhcccCCcccccCCcccHHHHHHHHHHHH
Confidence 467899999999999997777777888889999988544333211 11 24455555444333
Q ss_pred CCCCCH---HHHHHHHH-HHHHhh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc
Q 023109 67 GLPCAK---HEFVNEVY-SMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 67 ~~~~~~---~~~~~~~~-~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~ 141 (287)
...... ++....+. ..+... .....+.+++.++++.+|++|..++++||.+...- ..+ ..+|+..+||.++.|
T Consensus 84 f~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r~~-~~l-~~~~l~~~fD~vv~S 161 (237)
T KOG3085|consen 84 FGKAGIDYEEELLENFSFRLFSTFAPSAWKYLDGMQELLQKLRKKGTILGIISNFDDRLR-LLL-LPLGLSAYFDFVVES 161 (237)
T ss_pred hccccchhHHHHHhhhhhheeccccccCceeccHHHHHHHHHHhCCeEEEEecCCcHHHH-HHh-hccCHHHhhhhhhhh
Confidence 222111 11111111 111111 12456778888999999999999999999988764 455 788999999999999
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCC
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~ 195 (287)
.+.+..||+|.+|..+++++++.|++|++|||+. ||+++|+++|+.++.+.+..
T Consensus 162 ~e~g~~KPDp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~ 216 (237)
T KOG3085|consen 162 CEVGLEKPDPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSI 216 (237)
T ss_pred hhhccCCCChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEcccc
Confidence 9999999999999999999999999999999999 89999999999999998743
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=6e-23 Score=183.37 Aligned_cols=209 Identities=14% Similarity=0.114 Sum_probs=155.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (287)
.-.-++||+||||++++..++..+ ...++.+...+....+... ....+++.+.+...-..
T Consensus 9 ~~~pl~~DlDgTLi~td~l~e~~~-----------------~~l~~~p~~~~~l~~~~~~---g~a~lK~~~a~~~~~d~ 68 (479)
T PRK08238 9 RDLPLVVDLDGTLIRTDLLHESIF-----------------ALLRRNPLALLRLPLWLLR---GKAALKRRLARRVDLDV 68 (479)
T ss_pred CCCCEEEeCCCCccccchHHHHHH-----------------HHHHhChHHHHHHHHHHHh---cHHHHHHHHHhhcCCCh
Confidence 345699999999999999887766 3445566666555555443 45666666666443334
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
...+++|++.+++++++++|++++++|++++..++..+ +++|+ ||.++++++..+.||+++. ..+.+.++ .++
T Consensus 69 ~~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~-~~lGl---Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~ 141 (479)
T PRK08238 69 ATLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVA-AHLGL---FDGVFASDGTTNLKGAAKA-AALVEAFG--ERG 141 (479)
T ss_pred hhCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCC---CCEEEeCCCccccCCchHH-HHHHHHhC--ccC
Confidence 56788999999999999999999999999999999998 88888 9999999988778776543 33445554 356
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCC-Ccccc--ccCCcEEeCCccCcCccccCCCCccccccCCCCCCCceeeccce
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLP-KQTHR--YTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSEPWYIGGPVV 244 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~-~~~~~--~~~a~~v~~~l~el~~~~~~~~~~~~w~~~~~~~~p~~~~~~~~ 244 (287)
++|+|||.+|+++++.+|-+. .++.+. ..... ..-+..++++.......+.++.|+|||+||.+.+.|...+|...
T Consensus 142 ~~yvGDS~~Dlp~~~~A~~av-~Vn~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~l~Rp~q~~kn~l~~~p~l~a~~~~ 220 (479)
T PRK08238 142 FDYAGNSAADLPVWAAARRAI-VVGASPGVARAARALGPVERVFPPRPARLRTWLKALRVHQWAKNLLVFVPLLAAHQFG 220 (479)
T ss_pred eeEecCCHHHHHHHHhCCCeE-EECCCHHHHHHHHHcCCcceecCCCchHHHHHHHHhCCcHHHHHHHHHHHHHHhcccC
Confidence 999999999999999999544 555432 22222 22234555555555567889999999999999999998877653
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.5e-21 Score=155.25 Aligned_cols=178 Identities=15% Similarity=0.114 Sum_probs=118.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH--HHHhCCCHHHH-HHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGKTPLEE-AAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
++|+|+||+||||++++..+ ..+...++........ ....|...... .......+... . ..+ ..+.+.
T Consensus 3 ~~k~viFD~DGTLid~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~-~~~---~~~~~~ 73 (201)
T TIGR01491 3 MIKLIIFDLDGTLTDVMSSW----EYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRR-S-GRL---RREEVE 73 (201)
T ss_pred cceEEEEeCCCCCcCCccHH----HHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhc-c-cCC---CHHHHH
Confidence 57899999999999976432 2233344543211111 12222222222 11111111100 0 000 011122
Q ss_pred hhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCC----------CHHHH
Q 023109 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP----------SPDIF 154 (287)
Q Consensus 85 ~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp----------~~~~~ 154 (287)
..+...+++||+.++|+.++++|++++|+|++....++..+ +++|+...|+..+.+++.+..+| +++.+
T Consensus 74 ~~~~~~~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~ 152 (201)
T TIGR01491 74 EIFKEISLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVA-EKLNPDYVYSNELVFDEKGFIQPDGIVRVTFDNKGEAV 152 (201)
T ss_pred HHHHhCCCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHhCCCeEEEEEEEEcCCCeEecceeeEEccccHHHHH
Confidence 22345689999999999999999999999999999999999 88898887776665554443333 34678
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 155 ~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
.++++.+++++++++|||||.+|+++++.+|+.+++.+.+.
T Consensus 153 ~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~ 193 (201)
T TIGR01491 153 ERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGH 193 (201)
T ss_pred HHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCcc
Confidence 88899999999999999999999999999999888777643
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=153.09 Aligned_cols=123 Identities=24% Similarity=0.309 Sum_probs=99.2
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCccccceeecc-----------CC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----------DE 143 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~~fd~i~~~-----------~~ 143 (287)
..++||+.++|++|+++|++++++||.+. ..+...+ ...++. |+.++.+ ++
T Consensus 25 ~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~--~~~i~~~~~~~~~~~~~~~~ 101 (176)
T TIGR00213 25 FEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSL-AERDVD--LDGIYYCPHHPEGVEEFRQV 101 (176)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCCC--ccEEEECCCCCcccccccCC
Confidence 46889999999999999999999999984 2333445 555554 6666543 24
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeE-EEECCCCCcccc-ccCCcEEeCCccCcC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLR 215 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~-i~v~~~~~~~~~-~~~a~~v~~~l~el~ 215 (287)
....||+|+.|..++++++++|++|+||||+..|+.+|+++|+.+ +++..+...... ...++++++++.++.
T Consensus 102 ~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 102 CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 557899999999999999999999999999999999999999998 788876543333 346899999998864
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.7e-20 Score=148.17 Aligned_cols=184 Identities=13% Similarity=0.082 Sum_probs=125.0
Q ss_pred ccEEEEecCCcccccHHHHH-------HHHHHHHHHcCCCCCHHHHHHHhCCC-HHHHHHHHHHHhCCCCC---HHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFS-------EVLKTFLVKYGKEWDGREKHKIVGKT-PLEEAAIIVEDYGLPCA---KHEFVN 77 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~ 77 (287)
+++|++|+.||+++-.-... ..+..++............+...+.. .......+......+.. .+.+..
T Consensus 1 ~~~~l~diegt~~~isfv~~~lfpy~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~k~~~lk~lqg 80 (220)
T TIGR01691 1 IKNVLLDIEGTTGSISFVHDVLFPYAASRLESFVNDNYESTIVENLRELGKTPEELILLRKLHAEMDKDRKATPLKTLQG 80 (220)
T ss_pred CCEEEEecCCCcccHHHHHhhhhHHHHHHHHHHHHHhCCCHHHHHHHHhccCCcHHHHHHHHHHHHHcCCCcchHHHHHH
Confidence 57899999999997632221 12222233222111122222222221 12333333333333322 334444
Q ss_pred H-HHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc---CCccccceeeccCCcCCCCCCHHH
Q 023109 78 E-VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDI 153 (287)
Q Consensus 78 ~-~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~---gl~~~fd~i~~~~~~~~~kp~~~~ 153 (287)
. +.+.|.......+++||+.++|++++++|++++|+||++....+..+ ++. ++..+|+.++.. ....||+|+.
T Consensus 81 ~iw~~~Y~~~~~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~-~~~~~~~L~~~f~~~fd~--~~g~KP~p~~ 157 (220)
T TIGR01691 81 LIWRQGYESGELTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLF-GHSDAGNLTPYFSGYFDT--TVGLKTEAQS 157 (220)
T ss_pred HHHHHHHhcCCcccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-hhccccchhhhcceEEEe--CcccCCCHHH
Confidence 3 34444443346789999999999999999999999999998887777 664 566677776642 2337999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
|.++++++|++|++|+||||+..|+.+|+++|+.++++.++.
T Consensus 158 y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 158 YVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence 999999999999999999999999999999999999998754
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=99.86 E-value=6.1e-21 Score=156.50 Aligned_cols=194 Identities=19% Similarity=0.201 Sum_probs=131.4
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHH-HHHHhC--CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVG--KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
+.+|+|+||+||||++++. +..+++.+|....... ...+.+ .+..+.+...+..... ..+ .+...+
T Consensus 10 ~~~k~viFDfDGTL~~~~~-----~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~----~~~~~~ 78 (224)
T PLN02954 10 RSADAVCFDVDSTVCVDEG-----IDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAARLSLFKP--SLS----QVEEFL 78 (224)
T ss_pred ccCCEEEEeCCCcccchHH-----HHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHHHHHcCC--CHH----HHHHHH
Confidence 4689999999999999854 3666777776432222 223333 3334444443333321 122 222222
Q ss_pred HhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--ccccee---------eccCC---cCCCCC
Q 023109 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVI---------VGSDE---VRTGKP 149 (287)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~--~~fd~i---------~~~~~---~~~~kp 149 (287)
.. ....++||+.++++.++++|++++|+|++....++..+ +.+|+. ..|+.. ++.+. ....++
T Consensus 79 ~~--~~~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l-~~~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~ 155 (224)
T PLN02954 79 EK--RPPRLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVA-AILGIPPENIFANQILFGDSGEYAGFDENEPTSRSGG 155 (224)
T ss_pred HH--ccCCCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHhCCChhhEEEeEEEEcCCCcEECccCCCcccCCcc
Confidence 22 13568899999999999999999999999999999998 888886 355421 11111 123567
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCC-ccccccCCcEEeCCccCcCc
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~-~~~~~~~a~~v~~~l~el~~ 216 (287)
+|+.++++++.++. ++++||||+.+|+.+++++|+.+++...+.. .+.....++++++++.++..
T Consensus 156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECCHHHHHH
Confidence 88999999988874 6899999999999999998888766544332 22234568999999988754
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-21 Score=153.66 Aligned_cols=125 Identities=28% Similarity=0.333 Sum_probs=100.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCccccceeecc-----CCcCCCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKP 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~~fd~i~~~-----~~~~~~kp 149 (287)
..++||+.++|++|+++|++++++||.+. ..+...+ +++|+ .|+.++.+ ++....||
T Consensus 28 ~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~--~f~~i~~~~~~~~~~~~~~KP 104 (181)
T PRK08942 28 WIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSL-ADRGG--RLDGIYYCPHHPEDGCDCRKP 104 (181)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcCCCC
Confidence 46889999999999999999999999863 2234445 55666 37776643 34577999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-ccCC--cEEeCCccCcCcc
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAA--DEVINSLLDLRPE 217 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~~a--~~v~~~l~el~~~ 217 (287)
+|+.|.++++.+|++|++|+||||+.+|+.+|+++|+.++++..+...... ...+ +++++++.++...
T Consensus 105 ~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 105 KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 999999999999999999999999999999999999999999876543222 3345 8899988887544
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-21 Score=151.84 Aligned_cols=126 Identities=14% Similarity=0.202 Sum_probs=100.1
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChH--------HHHHHHHhhcCCccccceee-ccCCcCCCCCCHHHHHHHHHH
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRA--------TIESKISYQHGWNESFSVIV-GSDEVRTGKPSPDIFLEAAKR 160 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~--------~~~~~l~~~~gl~~~fd~i~-~~~~~~~~kp~~~~~~~~~~~ 160 (287)
..++||+.++|++|+++|++++++||.+.. .....+ +.+|+..+|.... ++++....||+|+.|.+++++
T Consensus 27 ~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~KP~p~~~~~~~~~ 105 (173)
T PRK06769 27 FTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQEL-KGFGFDDIYLCPHKHGDGCECRKPSTGMLLQAAEK 105 (173)
T ss_pred eEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHH-HhCCcCEEEECcCCCCCCCCCCCCCHHHHHHHHHH
Confidence 357899999999999999999999998641 123345 6667755544333 455667899999999999999
Q ss_pred cCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcc-------cc-ccCCcEEeCCccCcCc
Q 023109 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-------HR-YTAADEVINSLLDLRP 216 (287)
Q Consensus 161 l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~-------~~-~~~a~~v~~~l~el~~ 216 (287)
++++|++|+||||+..|+.+|+++|+.++++.++.... .. ...++++++++.++..
T Consensus 106 l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~el~~ 169 (173)
T PRK06769 106 HGLDLTQCAVIGDRWTDIVAAAKVNATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFEDAVN 169 (173)
T ss_pred cCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHHHHH
Confidence 99999999999999999999999999999998865321 11 3457888888887754
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-20 Score=158.68 Aligned_cols=184 Identities=15% Similarity=0.153 Sum_probs=127.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHH--HHhC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
..+++++||+||||+.. +.+.++.+.+|......... ...+ ....+.+......+.. ..+.+.
T Consensus 108 ~~~~LvvfDmDGTLI~~-----e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~~l~g--~~~~il------- 173 (322)
T PRK11133 108 RTPGLLVMDMDSTAIQI-----ECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVATLKG--ADANIL------- 173 (322)
T ss_pred cCCCEEEEECCCCCcch-----HHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHHHhCC--CCHHHH-------
Confidence 46899999999999844 34555666666644332221 1222 2233333322222211 111111
Q ss_pred HhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc-------eeeccC---CcCCCCCCHHH
Q 023109 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------VIVGSD---EVRTGKPSPDI 153 (287)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd-------~i~~~~---~~~~~kp~~~~ 153 (287)
......+++.||+.++++.+++.|++++|+|++....++... +++|+...+. ..+.+. +....+||++.
T Consensus 174 ~~v~~~l~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~-~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~ 252 (322)
T PRK11133 174 QQVRENLPLMPGLTELVLKLQALGWKVAIASGGFTYFADYLR-DKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADT 252 (322)
T ss_pred HHHHHhCCCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHH-HHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHH
Confidence 222245789999999999999999999999999988888777 7788765432 111111 23356899999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeC
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~ 209 (287)
++++++++|+++++|++|||+.||++|++.||+.+++ +. .+..+..+++++.
T Consensus 253 L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nA---kp~Vk~~Ad~~i~ 304 (322)
T PRK11133 253 LTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HA---KPKVNEQAQVTIR 304 (322)
T ss_pred HHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEec
Confidence 9999999999999999999999999999999998887 44 5666788888886
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.7e-21 Score=145.65 Aligned_cols=104 Identities=26% Similarity=0.342 Sum_probs=85.8
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcc--ccceee-ccCCcCCCCCCH
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNE--SFSVIV-GSDEVRTGKPSP 151 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~--~fd~i~-~~~~~~~~kp~~ 151 (287)
..++||+.++|+.|+++|++++++||.+. ..+...+ +++|+.. .|..+. .++..+..||+|
T Consensus 26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~KP~~ 104 (147)
T TIGR01656 26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL-RQLGVAVDGVLFCPHHPADNCSCRKPKP 104 (147)
T ss_pred eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH-HhCCCceeEEEECCCCCCCCCCCCCCCH
Confidence 35789999999999999999999999874 3455666 7778752 122222 245556689999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+.|..+++++++++++|+||||+..|+.+|+++|+.+++++.+
T Consensus 105 ~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 105 GLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEecCC
Confidence 9999999999999999999999999999999999999999763
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.8e-19 Score=143.80 Aligned_cols=146 Identities=16% Similarity=0.125 Sum_probs=107.4
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-c
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL-C 88 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 88 (287)
+|+||+||||+|+...+ .+|.. .+...++.+.+....+. +.... .
T Consensus 65 aViFDlDgTLlDSs~~~---------~~G~~~~s~~~~~~l~g~~~w~~------------------------~~~~~~~ 111 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGF---------WRGKKTFSPGSEDYLKNQVFWEK------------------------VNNGWDE 111 (237)
T ss_pred EEEEeCCCccccCcHHH---------hCCcccCCHHHhhhhcChHHHHH------------------------HHHhccc
Confidence 89999999999997755 14544 23333333333222211 11111 2
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCC----ChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNS----HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~----~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
...+.+++.++|+.++++|++++++||+ ....++..+ +++|+..+|+.+++++.....||++. ..++..++
T Consensus 112 ~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll-~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i- 186 (237)
T TIGR01672 112 FSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLA-KNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI- 186 (237)
T ss_pred CCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHH-HHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC-
Confidence 3456667999999999999999999998 556677777 88999999999999888777777764 34555554
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~ 197 (287)
++||||+.+|+.+|+++|+.++.+..+...
T Consensus 187 ---~i~vGDs~~DI~aAk~AGi~~I~V~~g~~s 216 (237)
T TIGR01672 187 ---RIHYGDSDNDITAAKEAGARGIRILRASNS 216 (237)
T ss_pred ---eEEEeCCHHHHHHHHHCCCCEEEEEecCCC
Confidence 799999999999999999999999876543
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.7e-19 Score=135.52 Aligned_cols=97 Identities=24% Similarity=0.445 Sum_probs=85.1
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCC--------hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHc-
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSH--------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL- 161 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~--------~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l- 161 (287)
.++|++.++|+.|+++|++++++||++ ...++..+ +++++. ++.++.+. ...||+|+.|..+++.+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l-~~~~l~--~~~~~~~~--~~~KP~~~~~~~~~~~~~ 99 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRL-EELGVP--IDVLYACP--HCRKPKPGMFLEALKRFN 99 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHH-HHCCCC--EEEEEECC--CCCCCChHHHHHHHHHcC
Confidence 578999999999999999999999998 77788888 888885 34444443 56799999999999999
Q ss_pred CCCCCcEEEEeC-CHhhHHHHHHcCCeEEEEC
Q 023109 162 NMEPSSSLVIED-SVIGVVAGKAAGMEVVAVP 192 (287)
Q Consensus 162 ~~~~~~~l~iGD-s~~Dv~~a~~aG~~~i~v~ 192 (287)
+++|++++|||| +..|+.+|+++|+.+++++
T Consensus 100 ~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 100 EIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 599999999999 6899999999999999886
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-20 Score=145.16 Aligned_cols=107 Identities=16% Similarity=0.069 Sum_probs=95.4
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcCCc---------cccceeeccCCcCCCCCCHHHHHHH
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN---------ESFSVIVGSDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~-~~~~~~~~l~~~~gl~---------~~fd~i~~~~~~~~~kp~~~~~~~~ 157 (287)
...+++||+.++|+.|+++|++++++||+ ....++..+ +.+++. .+|+.++++++....||.+.+++.+
T Consensus 42 ~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L-~~~~l~~~~~~~~~~~~Fd~iv~~~~~~~~kp~~~i~~~~ 120 (174)
T TIGR01685 42 TEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEIL-GTFEITYAGKTVPMHSLFDDRIEIYKPNKAKQLEMILQKV 120 (174)
T ss_pred CEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHH-HhCCcCCCCCcccHHHhceeeeeccCCchHHHHHHHHHHh
Confidence 35788999999999999999999999998 888888888 888988 9999999998876677777777777
Q ss_pred HHHc--CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 158 AKRL--NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 158 ~~~l--~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
.+.+ ++.|++|+||||++.|+.+|+++|+.++++..+.
T Consensus 121 ~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~v~~g~ 160 (174)
T TIGR01685 121 NKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCYCPSGM 160 (174)
T ss_pred hhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEEcCCCc
Confidence 7777 7999999999999999999999999999998854
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=138.14 Aligned_cols=102 Identities=15% Similarity=0.185 Sum_probs=90.5
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCccccceee-c----cCCcCCCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIV-G----SDEVRTGKP 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~---------------~~~~~~~l~~~~gl~~~fd~i~-~----~~~~~~~kp 149 (287)
++++||+.++|++|+++|++++++||.+ ...+...+ +++|+. |+.++ + +++....||
T Consensus 28 ~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~ii~~~~~~~~~~~~~KP 104 (161)
T TIGR01261 28 LRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIF-RSQGII--FDDVLICPHFPDDNCDCRKP 104 (161)
T ss_pred eeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHH-HHCCCc--eeEEEECCCCCCCCCCCCCC
Confidence 5789999999999999999999999973 44566677 888886 87654 4 477888999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+++.+..+++.+++++++++||||+..|+.+|+++|+.++++..+
T Consensus 105 ~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~~ 149 (161)
T TIGR01261 105 KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDEE 149 (161)
T ss_pred CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEEChh
Confidence 999999999999999999999999999999999999999999884
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.1e-18 Score=139.83 Aligned_cols=190 Identities=14% Similarity=0.165 Sum_probs=122.5
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-H-hC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+||+||||++++... . ++++++. ........ . .+ .+..+.+...+..+... .. +.+.+.+.
T Consensus 4 ~~vifDfDgTi~~~d~~~-~----~~~~~~~-~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~~-~~----~~~~~~~~-- 70 (219)
T PRK09552 4 IQIFCDFDGTITNNDNII-A----IMKKFAP-PEWEELKDDILSQELSIQEGVGQMFQLLPSN-LK----EEIIQFLL-- 70 (219)
T ss_pred cEEEEcCCCCCCcchhhH-H----HHHHhCH-HHHHHHHHHHHhCCcCHHHHHHHHHHhCCCC-ch----HHHHHHHH--
Confidence 489999999999998754 2 2333332 11222211 1 12 24556666666665422 11 22222222
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cc--ceeeccCCcCCCCCCHHH---------
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--SVIVGSDEVRTGKPSPDI--------- 153 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~--~f--d~i~~~~~~~~~kp~~~~--------- 153 (287)
...+++||+.++|+.++++|++++|+|++....++..+ +++ +.. .+ +..+.++.....||.|..
T Consensus 71 -~~~~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~-~~~~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~ 147 (219)
T PRK09552 71 -ETAEIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLL-QGL-IPKEQIYCNGSDFSGEYITITWPHPCDEHCQNHCGC 147 (219)
T ss_pred -hCCCcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHH-HHh-CCcCcEEEeEEEecCCeeEEeccCCccccccccCCC
Confidence 34789999999999999999999999999999999988 665 532 22 333444445556666543
Q ss_pred -HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC-CCccccccCCcEEeCCccCcCcc
Q 023109 154 -FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 154 -~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~-~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
...+++.++..+++|+|||||.+|+++|++||+.++ ... .........+.+.++++.|+...
T Consensus 148 ~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a--~~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 148 CKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA--RDFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred chHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee--HHHHHHHHHHcCCCccccCCHHHHHHH
Confidence 357888999999999999999999999999998444 210 00111234456666777766544
|
|
| >KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3e-18 Score=132.83 Aligned_cols=182 Identities=20% Similarity=0.242 Sum_probs=128.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHH----HH-HHHcCCCCCHHHHH-HHhCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLK----TF-LVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~----~~-~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (287)
..++++++||+|+||+.....+....+ ++ .+++|...+..... ...-+..-..++.+ ...+...+..++.+.+
T Consensus 12 ~~~~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aGL-~~~~~~~d~deY~~~V 90 (244)
T KOG3109|consen 12 GPNYKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAGL-KAVGYIFDADEYHRFV 90 (244)
T ss_pred CccceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHHH-HHhcccCCHHHHHHHh
Confidence 347899999999999987655544443 22 34566654332211 00001111111111 2223223344443322
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC------CCCCCHHH
Q 023109 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR------TGKPSPDI 153 (287)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~------~~kp~~~~ 153 (287)
.... -++.+.+.+-.+.+|-.++.++ .+++||+...++.+.+ ..+|+.++|+++++.+... .-||.+++
T Consensus 91 ~~~L--Plq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~L-k~LGieDcFegii~~e~~np~~~~~vcKP~~~a 165 (244)
T KOG3109|consen 91 HGRL--PLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRIL-KKLGIEDCFEGIICFETLNPIEKTVVCKPSEEA 165 (244)
T ss_pred hccC--cHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHH-HHhChHHhccceeEeeccCCCCCceeecCCHHH
Confidence 2211 1245788889999999998764 9999999999999999 9999999999999876433 47999999
Q ss_pred HHHHHHHcCCC-CCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 154 FLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 154 ~~~~~~~l~~~-~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
|+++++..|+. |.++++|+||.++|..|++.|++++++..
T Consensus 166 fE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~ 206 (244)
T KOG3109|consen 166 FEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGR 206 (244)
T ss_pred HHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEe
Confidence 99999999998 99999999999999999999999999987
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=139.20 Aligned_cols=188 Identities=17% Similarity=0.124 Sum_probs=118.2
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhC-CCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHhh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYG-LPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 86 (287)
+++|+||+||||++ ..+..+.+++|.+.... ...+ ......+........ ...+.+.+ ...
T Consensus 1 ~~~v~FD~DGTL~~------~~~~~~~~~~g~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~i--------~~~ 63 (205)
T PRK13582 1 MEIVCLDLEGVLVP------EIWIAFAEKTGIPELRA---TTRDIPDYDVLMKQRLDILDEHGLGLADI--------QEV 63 (205)
T ss_pred CeEEEEeCCCCChh------hHHHHHHHHcCChHHHH---HhcCCCCHHHHHHHHHHHHHHcCCCHHHH--------HHH
Confidence 47899999999993 24455666777532110 0011 112222222111111 00112222 222
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC----cCCCCCCHHHHHHHHHHcC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~----~~~~kp~~~~~~~~~~~l~ 162 (287)
....+++||+.++|+.++++ ++++++|++....++..+ +++|+..+|+..+..++ .+..++.|.....+++.++
T Consensus 64 ~~~~~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~ 141 (205)
T PRK13582 64 IATLDPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLM-RQLGWPTLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALK 141 (205)
T ss_pred HHhCCCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHH-HHcCCchhhcceEEECCCCeEECccccccchHHHHHHHHH
Confidence 34578899999999999999 999999999999999988 88899887765433221 1112233444456666677
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcE-EeCCccCcCccc
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE-VINSLLDLRPEK 218 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~-v~~~l~el~~~~ 218 (287)
..+++|+|||||.+|+++++++|+.+.+ +.. .......+++ +++++.++...+
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~~v~~-~~~--~~~~~~~~~~~~~~~~~el~~~l 195 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADAGILF-RPP--ANVIAEFPQFPAVHTYDELLAAI 195 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCCCEEE-CCC--HHHHHhCCcccccCCHHHHHHHH
Confidence 7788999999999999999999986643 221 1112234444 888888886554
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-18 Score=132.20 Aligned_cols=96 Identities=16% Similarity=0.207 Sum_probs=82.8
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChH------------HHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRA------------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~------------~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
++||+.++|+.|+++|++++++||.+.. .++..+ +++|+. ++.++++++....||+|+.+..+++
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l-~~~gl~--~~~ii~~~~~~~~KP~p~~~~~~~~ 119 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFL-EKLKVP--IQVLAATHAGLYRKPMTGMWEYLQS 119 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHH-HHcCCC--EEEEEecCCCCCCCCccHHHHHHHH
Confidence 6799999999999999999999998763 456677 888884 3666666666678999999999999
Q ss_pred HcC--CCCCcEEEEeCCH--------hhHHHHHHcCCeEEE
Q 023109 160 RLN--MEPSSSLVIEDSV--------IGVVAGKAAGMEVVA 190 (287)
Q Consensus 160 ~l~--~~~~~~l~iGDs~--------~Dv~~a~~aG~~~i~ 190 (287)
+++ +++++++||||+. +|+.+|+++|+.++.
T Consensus 120 ~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 120 QYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred HcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 999 9999999999996 699999999998763
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.5e-18 Score=127.16 Aligned_cols=104 Identities=31% Similarity=0.471 Sum_probs=93.4
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCC----------------CCC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------------KPS 150 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~----------------kp~ 150 (287)
.....+++++.+++++++++|++++++|++....++..+ +..++...++.+++++..... ||+
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELL-EELGLDDYFDPVITSNGAAIYYPKEGLFLGGGPFDIGKPN 98 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHH-HHcCCchhhhheeccchhhhhcccccccccccccccCCCC
Confidence 356789999999999999999999999999999999999 788888888988887655444 999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEE
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
+..+..+.+.++..++++++|||+.+|+.+++++|+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 99 PDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVAV 139 (139)
T ss_pred HHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceeeC
Confidence 99999999999999999999999999999999999988764
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.7e-17 Score=131.13 Aligned_cols=97 Identities=16% Similarity=0.199 Sum_probs=80.3
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC--------------------cCCC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRTG 147 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~--------------------~~~~ 147 (287)
...++.||+.++++.++++|++++++|++....++..+ +++++..+|+.+++++. ...+
T Consensus 69 ~~~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~g 147 (188)
T TIGR01489 69 KSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVL-EGIGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPCG 147 (188)
T ss_pred HhCCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HHcCChhheeEEeccCceECCCCcEEEecCCCCccCcCCCC
Confidence 34789999999999999999999999999999999888 88899999999987543 1223
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeE
Q 023109 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188 (287)
Q Consensus 148 kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~ 188 (287)
.+|++.++.+.+.. +++++||||+.+|+++|+++++.+
T Consensus 148 ~~K~~~~~~~~~~~---~~~~i~iGD~~~D~~aa~~~d~~~ 185 (188)
T TIGR01489 148 CCKGKVIHKLSEPK---YQHIIYIGDGVTDVCPAKLSDVVF 185 (188)
T ss_pred CCHHHHHHHHHhhc---CceEEEECCCcchhchHhcCCccc
Confidence 34566777666543 789999999999999999997543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.5e-16 Score=127.04 Aligned_cols=180 Identities=17% Similarity=0.135 Sum_probs=116.2
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH------HHHHHHh--CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG------REKHKIV--GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
+++||+||||++.+... ..+...+.+....... ....... +....+....+....-...+.+++.....+.
T Consensus 1 ~a~FD~DgTL~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~ 79 (202)
T TIGR01490 1 LAFFDFDGTLTAKDTLF-IFLKFLASKNILFEELRLPKVLARFEFFLNRGLDYMAYYRAFALDALAGLLEEDVRAIVEEF 79 (202)
T ss_pred CeEEccCCCCCCCchHH-HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 37999999999986543 2233333222111000 0011111 1122233333332121223455665444444
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccce-eec-cC---------CcCCCCCCH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVG-SD---------EVRTGKPSP 151 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~-i~~-~~---------~~~~~kp~~ 151 (287)
+... -...++|++.++++.++++|++++++|++....++..+ +++|+...|.. +.. .+ ....++++.
T Consensus 80 ~~~~-~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~-~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~ 157 (202)
T TIGR01490 80 VNQK-IESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLA-RILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKV 157 (202)
T ss_pred HHHH-HHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCcceEecceEEcCCCEEeCCccCCCCCChHHH
Confidence 3332 23568999999999999999999999999999999888 88898877654 221 11 122345666
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
..+++.++..++++++|+++|||.+|+++++.+|..+++.+.
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~~~ 199 (202)
T TIGR01490 158 HALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVNPD 199 (202)
T ss_pred HHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeCCC
Confidence 778888899999999999999999999999999988876654
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.8e-16 Score=123.46 Aligned_cols=159 Identities=16% Similarity=0.103 Sum_probs=103.5
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCC-CHHHHHHHHHHH---hCCCCCHHHHHHHHHHHHHh
Q 023109 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-TPLEEAAIIVED---YGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 85 (287)
++++||+||||++. .|.++..+.|... .... ..+. ...++...-+.. .|. +.+.+ .+
T Consensus 2 ~la~FDlD~TLi~~------~w~~~~~~~g~~~--~~~~-~~~~~~~~~~~~~r~~ll~~~g~--~~~~i--------~~ 62 (203)
T TIGR02137 2 EIACLDLEGVLVPE------IWIAFAEKTGIDA--LKAT-TRDIPDYDVLMKQRLRILDEHGL--KLGDI--------QE 62 (203)
T ss_pred eEEEEeCCcccHHH------HHHHHHHHcCCcH--HHHH-hcCCcCHHHHHHHHHHHHHHCCC--CHHHH--------HH
Confidence 56999999999964 3667777777431 1111 1111 222222211111 132 23333 22
Q ss_pred hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccccee--------eccCCcCCCCCCHHHHHHH
Q 023109 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--------VGSDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i--------~~~~~~~~~kp~~~~~~~~ 157 (287)
....++++||+.++++.+++.+ +++++|++....++..+ +.+|+...|... +.+... ..++.+....+.
T Consensus 63 ~~~~i~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il-~~lgi~~~~an~l~~~~~g~~tG~~~-~~~~~K~~~l~~ 139 (203)
T TIGR02137 63 VIATLKPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQL-RQKDPKRQSVIA 139 (203)
T ss_pred HHHhCCCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHH-HHcCCchhhceeeEEecCCeeECeee-cCcchHHHHHHH
Confidence 2345689999999999999985 99999999999999988 889998777521 111111 233333333333
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 158 ~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
++..+ .++++||||.||+++++.+|..+++...
T Consensus 140 l~~~~---~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 140 FKSLY---YRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred HHhhC---CCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 44444 4799999999999999999999988776
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.8e-16 Score=127.75 Aligned_cols=103 Identities=19% Similarity=0.283 Sum_probs=87.6
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC----------cCCCCCCHHHHHHHHH
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDIFLEAAK 159 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~----------~~~~kp~~~~~~~~~~ 159 (287)
.++.||+.++++.++++|.+++++|++....++... +.+|++..+...+..++ ....+.|...+.+.++
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia-~~lg~d~~~an~l~~~dG~ltG~v~g~~~~~~~K~~~l~~~~~ 154 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIA-ERLGIDYVVANELEIDDGKLTGRVVGPICDGEGKAKALRELAA 154 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHH-HHhCCchheeeEEEEeCCEEeceeeeeecCcchHHHHHHHHHH
Confidence 789999999999999999999999999999999888 99998877755444333 1123446677888999
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+|+++++++++|||.||++|.+.+|.+.+..+.
T Consensus 155 ~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~~ 188 (212)
T COG0560 155 ELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPK 188 (212)
T ss_pred HcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCcC
Confidence 9999999999999999999999999988887665
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.2e-17 Score=137.88 Aligned_cols=121 Identities=26% Similarity=0.329 Sum_probs=93.1
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceee---ccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV---GSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~---~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
++++.+.++.++++|. ++++||.+............+...+|+.+. +.+....+||+|..+..++++++++|++|+
T Consensus 145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~l 223 (279)
T TIGR01452 145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTL 223 (279)
T ss_pred HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEE
Confidence 6788999999998886 789999876543211113345555666554 334456789999999999999999999999
Q ss_pred EEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----------ccCCcEEeCCccCc
Q 023109 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----------YTAADEVINSLLDL 214 (287)
Q Consensus 170 ~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----------~~~a~~v~~~l~el 214 (287)
||||++ .|+.+|+++|+.++++.+|....+. ...|+++++++.++
T Consensus 224 mIGD~~~tDI~~A~~aGi~si~V~~G~~~~~~l~~~~~~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 224 MVGDRLETDILFGHRCGMTTVLVLSGVSRLEEAQEYLAAGQHDLVPDYVVESLADL 279 (279)
T ss_pred EECCChHHHHHHHHHcCCcEEEECCCCCCHHHHHhhhcccccCCCCCEEecccccC
Confidence 999996 8999999999999999987554322 13579999988764
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.4e-17 Score=128.09 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=85.3
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
.+++|+++|++++++||.+...+...+ +++|+..+|+. .+|+|+.+.++++++++++++|+||||+.+|+
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l-~~~gi~~~~~~---------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~ 105 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRC-KTLGITHLYQG---------QSNKLIAFSDILEKLALAPENVAYIGDDLIDW 105 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHH-HHcCCCEEEec---------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 789999999999999999999998888 88898776652 37889999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
++++.+|+...+.+. .+..+..+++++++..
T Consensus 106 ~~~~~ag~~~~v~~~---~~~~~~~a~~i~~~~~ 136 (154)
T TIGR01670 106 PVMEKVGLSVAVADA---HPLLIPRADYVTRIAG 136 (154)
T ss_pred HHHHHCCCeEecCCc---CHHHHHhCCEEecCCC
Confidence 999999998444444 2345666788887664
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=99.70 E-value=6e-16 Score=125.85 Aligned_cols=161 Identities=17% Similarity=0.177 Sum_probs=105.0
Q ss_pred EEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-H-hCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhcc
Q 023109 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I-VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK 89 (287)
Q Consensus 12 iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (287)
++||+||||++.+... .. ++.++.+........ . .+.+..+.+...+...+.. . .+.+.+.+. ..
T Consensus 2 ~~fDFDgTit~~d~~~-~~----~~~~~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~--~---~~~~~~~~~---~~ 68 (214)
T TIGR03333 2 IICDFDGTITNNDNII-SI----MKQFAPPEWEALKDGVLSKTLSIQEGVGRMFGLLPSS--L---KEEITSFVL---ET 68 (214)
T ss_pred EEeccCCCCCcchhHH-HH----HHHhCcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCc--h---HHHHHHHHH---hc
Confidence 7999999999886533 11 222221110111111 1 1334666666666555432 1 112222222 24
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc---ceeeccCCcCCCCCCHHHH----------HH
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF---SVIVGSDEVRTGKPSPDIF----------LE 156 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f---d~i~~~~~~~~~kp~~~~~----------~~ 156 (287)
.+++||+.++++.++++|++++|+|++....++..+ ++++....+ +.++.++.....+|.|..+ ..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il-~~~~~~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHH-HhhCCcccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 789999999999999999999999999999999888 665443333 2334444445556665543 46
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
+++.++..+++++||||+.+|+.+|+.||+
T Consensus 148 ~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred HHHHHhhcCCcEEEEeCCHHHHHHHHhCCe
Confidence 677777788999999999999999999997
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=99.70 E-value=2e-17 Score=128.21 Aligned_cols=100 Identities=13% Similarity=0.166 Sum_probs=87.2
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
-++.|+++|++++++|+.+...++..+ +++|+..+|+.+ ||+|+.+..+++.+++++++|+||||+.+|+
T Consensus 42 ~~~~L~~~Gi~laIiT~k~~~~~~~~l-~~lgi~~~f~~~---------kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi 111 (169)
T TIGR02726 42 GVIVLQLCGIDVAIITSKKSGAVRHRA-EELKIKRFHEGI---------KKKTEPYAQMLEEMNISDAEVCYVGDDLVDL 111 (169)
T ss_pred HHHHHHHCCCEEEEEECCCcHHHHHHH-HHCCCcEEEecC---------CCCHHHHHHHHHHcCcCHHHEEEECCCHHHH
Confidence 466788899999999999999999999 999998777632 7899999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
.+++.+|+.+++.+. .+..+..++++..+.
T Consensus 112 ~~~~~ag~~~am~nA---~~~lk~~A~~I~~~~ 141 (169)
T TIGR02726 112 SMMKRVGLAVAVGDA---VADVKEAAAYVTTAR 141 (169)
T ss_pred HHHHHCCCeEECcCc---hHHHHHhCCEEcCCC
Confidence 999999999988877 455677778877543
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.1e-16 Score=121.38 Aligned_cols=98 Identities=19% Similarity=0.251 Sum_probs=82.8
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCC-hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~-~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
.++|++.++|+.|++.|++++++||++ ...+...+ +.+++..+ .+..||+|+.|..+++.+++++++++
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~-~~~gl~~~---------~~~~KP~p~~~~~~l~~~~~~~~~~l 112 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE-KALGIPVL---------PHAVKPPGCAFRRAHPEMGLTSEQVA 112 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH-HHcCCEEE---------cCCCCCChHHHHHHHHHcCCCHHHEE
Confidence 457899999999999999999999998 56666555 66665322 13479999999999999999999999
Q ss_pred EEeCCH-hhHHHHHHcCCeEEEECCCCCcc
Q 023109 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQT 198 (287)
Q Consensus 170 ~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~ 198 (287)
||||+. .|+.+|+++|+.++++..+....
T Consensus 113 ~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~ 142 (170)
T TIGR01668 113 VVGDRLFTDVMGGNRNGSYTILVEPLVHPD 142 (170)
T ss_pred EECCcchHHHHHHHHcCCeEEEEccCcCCc
Confidence 999998 79999999999999998865443
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=99.69 E-value=3.3e-17 Score=136.63 Aligned_cols=123 Identities=20% Similarity=0.196 Sum_probs=100.5
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC---CCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~---~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
++++.+.++.+++.+++++++||.+........ ...|+..+|+.+.++.... .+||+|..|..++++++++|++++
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~ 200 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAV 200 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEE
Confidence 467888899999889999999999887765555 5667878888776554433 379999999999999999999999
Q ss_pred EEeCCH-hhHHHHHHcCCeEEEECCCCCc-c---ccccCCcEEeCCccCcCc
Q 023109 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-T---HRYTAADEVINSLLDLRP 216 (287)
Q Consensus 170 ~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~-~---~~~~~a~~v~~~l~el~~ 216 (287)
||||+. .|+.+|+++|+.++++.++... . .....++++++++.++..
T Consensus 201 ~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~ 252 (257)
T TIGR01458 201 MIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVD 252 (257)
T ss_pred EECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECCHHHHHH
Confidence 999997 8999999999999999887422 2 124567999999988754
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.1e-15 Score=119.00 Aligned_cols=96 Identities=21% Similarity=0.227 Sum_probs=78.4
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC------------CcCCCCCCHHHHH
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------------EVRTGKPSPDIFL 155 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~------------~~~~~kp~~~~~~ 155 (287)
..+++.||+.++++.++++|++++++|++....++..+ +++|+...|...+..+ ....+..|+..++
T Consensus 70 ~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~-~~~g~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~l~ 148 (177)
T TIGR01488 70 RQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVA-EKLGIDDVFANRLEFDDNGLLTGPIEGQVNPEGECKGKVLK 148 (177)
T ss_pred hcCCcCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCchheeeeEEECCCCEEeCccCCcccCCcchHHHHHH
Confidence 35678999999999999999999999999999999988 8888877665443332 1223445667788
Q ss_pred HHHHHcCCCCCcEEEEeCCHhhHHHHHHc
Q 023109 156 EAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 156 ~~~~~l~~~~~~~l~iGDs~~Dv~~a~~a 184 (287)
+.++..++++++++|||||.+|+++++.+
T Consensus 149 ~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 149 ELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 88888899999999999999999999864
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6.7e-16 Score=132.59 Aligned_cols=102 Identities=18% Similarity=0.243 Sum_probs=87.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCC---------------ChHHHHHHHHhhcCCccccceee-c----cCCcCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIV-G----SDEVRTGK 148 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~---------------~~~~~~~~l~~~~gl~~~fd~i~-~----~~~~~~~k 148 (287)
...++||+.++|++|+++|++++|+||. ....+...+ +.+++. |+.++ + ++++...|
T Consensus 28 ~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL-~~~gl~--fd~i~i~~~~~sd~~~~rK 104 (354)
T PRK05446 28 KLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIF-ESQGIK--FDEVLICPHFPEDNCSCRK 104 (354)
T ss_pred cceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHH-HHcCCc--eeeEEEeCCcCcccCCCCC
Confidence 3678999999999999999999999995 234455566 777773 76654 3 35667899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
|+|+.+..+++.++++|++++||||+.+|+.+|+++|+++++++.
T Consensus 105 P~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~ 149 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYAR 149 (354)
T ss_pred CCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEC
Confidence 999999999999999999999999999999999999999999976
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.6e-16 Score=118.29 Aligned_cols=88 Identities=19% Similarity=0.166 Sum_probs=77.4
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcC-------CccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~-~~~~~~~~l~~~~g-------l~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
+++||+.++|+.++++|++++++|++ ....+...+ ++.+ +..+|+.++++++ +|+|+.|.++++++|
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l-~~~~~~~~i~~l~~~f~~~~~~~~----~pkp~~~~~a~~~lg 103 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELL-KIFEDFGIIFPLAEYFDPLTIGYW----LPKSPRLVEIALKLN 103 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHH-HhccccccchhhHhhhhhhhhcCC----CcHHHHHHHHHHHhc
Confidence 57889999999999999999999999 787777777 7777 7888998887753 588999999999999
Q ss_pred --CCCCcEEEEeCCHhhHHHHHH
Q 023109 163 --MEPSSSLVIEDSVIGVVAGKA 183 (287)
Q Consensus 163 --~~~~~~l~iGDs~~Dv~~a~~ 183 (287)
+.|++|+||||+..|+...+.
T Consensus 104 ~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 104 GVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred CCCCcceEEEECCCHhHHHHHHh
Confidence 999999999999999876653
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-16 Score=126.69 Aligned_cols=90 Identities=32% Similarity=0.468 Sum_probs=79.1
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
.+++|++.+++++|++.|++++++|+.+...+.... +.+|+ ++.++.+... +||.+..+.++++.++.++++|+
T Consensus 126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~-~~lgi---~~~~v~a~~~--~kP~~k~~~~~i~~l~~~~~~v~ 199 (215)
T PF00702_consen 126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIA-KQLGI---FDSIVFARVI--GKPEPKIFLRIIKELQVKPGEVA 199 (215)
T ss_dssp EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHH-HHTTS---CSEEEEESHE--TTTHHHHHHHHHHHHTCTGGGEE
T ss_pred CcchhhhhhhhhhhhccCcceeeeeccccccccccc-ccccc---cccccccccc--ccccchhHHHHHHHHhcCCCEEE
Confidence 478999999999999999999999999999999888 88898 4433333322 78999999999999999999999
Q ss_pred EEeCCHhhHHHHHHcC
Q 023109 170 VIEDSVIGVVAGKAAG 185 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG 185 (287)
||||+.||+.++++||
T Consensus 200 ~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 200 MVGDGVNDAPALKAAG 215 (215)
T ss_dssp EEESSGGHHHHHHHSS
T ss_pred EEccCHHHHHHHHhCc
Confidence 9999999999999987
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.6e-15 Score=129.89 Aligned_cols=105 Identities=17% Similarity=0.112 Sum_probs=95.5
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-ccceeeccC-------CcCCCCCCHHHHHHHHHH
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSD-------EVRTGKPSPDIFLEAAKR 160 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~-~fd~i~~~~-------~~~~~kp~~~~~~~~~~~ 160 (287)
...++|++.++++.++++|++++++|+.+....+..+ +++++.+ +|+.+++.+ +....||+|+.+.++++.
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l-~~l~~~~~~f~~i~~~~~~~~~~~~~~~~kp~p~~~~~~l~~ 263 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTV-EWLRQTDIWFDDLIGRPPDMHFQREQGDKRPDDVVKEEIFWE 263 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHH-HHHHHcCCchhhhhCCcchhhhcccCCCCCCcHHHHHHHHHH
Confidence 4578999999999999999999999999999988888 8888886 899999887 455789999999999999
Q ss_pred cCC-CCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 161 LNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 161 l~~-~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
++. ++++|+||||+.+|+.+|+++|+.++++..|
T Consensus 264 ~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~~g 298 (300)
T PHA02530 264 KIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVAPG 298 (300)
T ss_pred HhccCceEEEEEcCcHHHHHHHHHhCCeEEEecCC
Confidence 988 6799999999999999999999999999764
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=4.6e-15 Score=120.86 Aligned_cols=99 Identities=15% Similarity=0.134 Sum_probs=79.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCC----hHHHHHHHHhhcCC--ccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSH----RATIESKISYQHGW--NESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~----~~~~~~~l~~~~gl--~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
...+.||+.++|+.++++|++++++||++ ...++..+ +++|+ .++|+.+++++.. .|+++. ..++.++
T Consensus 112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Ll-k~~gip~~~~f~vil~gd~~--~K~~K~---~~l~~~~ 185 (237)
T PRK11009 112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLA-DDFHIPADNMNPVIFAGDKP--GQYTKT---QWLKKKN 185 (237)
T ss_pred cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHH-HHcCCCcccceeEEEcCCCC--CCCCHH---HHHHhcC
Confidence 46788999999999999999999999964 34555555 77899 7889988887753 556543 3455555
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~ 197 (287)
+ ++||||+.+|+.+|++||+.++.+..+...
T Consensus 186 i----~I~IGDs~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 186 I----RIFYGDSDNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred C----eEEEcCCHHHHHHHHHcCCcEEEEecCCCC
Confidence 4 899999999999999999999999886543
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.5e-16 Score=129.33 Aligned_cols=77 Identities=25% Similarity=0.360 Sum_probs=64.7
Q ss_pred eeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----ccCCcEEeCCcc
Q 023109 138 IVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLL 212 (287)
Q Consensus 138 i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~~~l~ 212 (287)
+.+.+....+||+|+.+..+++.+++++++|+||||+. .|+.+|+++|+.++++.+|....+. ...++++++++.
T Consensus 164 ~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~ 243 (248)
T PRK10444 164 ISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSTLDDIDSMPFRPSWIYPSVA 243 (248)
T ss_pred HhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEECCCCCCHHHHhcCCCCCCEEECCHH
Confidence 33444555689999999999999999999999999997 8999999999999999987654333 246899999998
Q ss_pred Cc
Q 023109 213 DL 214 (287)
Q Consensus 213 el 214 (287)
++
T Consensus 244 el 245 (248)
T PRK10444 244 DI 245 (248)
T ss_pred Hh
Confidence 76
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-14 Score=115.51 Aligned_cols=181 Identities=13% Similarity=0.094 Sum_probs=109.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHH-HHcCCCCCH-HHHHHHhCCCHHHHHHH-------HHHHhCCCCCHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFL-VKYGKEWDG-REKHKIVGKTPLEEAAI-------IVEDYGLPCAKHEFVNE 78 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 78 (287)
..|+++||+||||++.+ ....+..++ ++++..... .......|.+....... ++.......+.+++ +.
T Consensus 5 ~~k~~iFD~DGTL~~~d--~~~~~~~~~~~~~g~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~ 81 (211)
T PRK11590 5 ERRVVFFDLDGTLHQQD--MFGSFLRYLLRRQPLNLLLVLPLLPVIGLGLLVKGRAARWPMSLLLWGCTFGHSEARL-QA 81 (211)
T ss_pred cceEEEEecCCCCcccc--hHHHHHHHHHHhcchhhHHHhHHHHHhccCcccchhhhhhhHHHHHHHHHcCCCHHHH-HH
Confidence 45799999999999554 333444444 777755322 44445555544332211 11111111123333 22
Q ss_pred HHHHHHhhhc-cCCCCCcHHHHH-HHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC--------CcCCCC
Q 023109 79 VYSMFSDHLC-KVKALPGANRLI-KHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--------EVRTGK 148 (287)
Q Consensus 79 ~~~~~~~~~~-~~~~~~g~~~~l-~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~--------~~~~~k 148 (287)
+.+.+.+.+. ...++||+.+.| +.+++.|++++++|+++...++..+ ..+|+.. .+.+++++ -.+...
T Consensus 82 ~~~~f~~~~~~~~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il-~~l~~~~-~~~~i~t~l~~~~tg~~~g~~c 159 (211)
T PRK11590 82 LEADFVRWFRDNVTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVY-FDTPWLP-RVNLIASQMQRRYGGWVLTLRC 159 (211)
T ss_pred HHHHHHHHHHHhCcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHccccc-cCceEEEEEEEEEccEECCccC
Confidence 3333333332 256799999999 5788899999999999999999888 7777522 23444432 111111
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
-..+-...+.+.++.+.+.+.+.|||.+|+++...+|-+.++.+.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp~ 204 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTPR 204 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECcc
Confidence 111222334444566777888999999999999999988776655
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.62 E-value=6.1e-15 Score=110.05 Aligned_cols=92 Identities=25% Similarity=0.418 Sum_probs=82.1
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~i 171 (287)
..|.+.+.+.++++.|++++++||++.+.+.... +++|+ +.+. ...||.+..|+++++.+++++++|+||
T Consensus 47 ~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~-~~l~v----~fi~-----~A~KP~~~~fr~Al~~m~l~~~~vvmV 116 (175)
T COG2179 47 ATPELRAWLAELKEAGIKVVVVSNNKESRVARAA-EKLGV----PFIY-----RAKKPFGRAFRRALKEMNLPPEEVVMV 116 (175)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhh-hhcCC----ceee-----cccCccHHHHHHHHHHcCCChhHEEEE
Confidence 3456678899999999999999999999998888 88776 4444 458999999999999999999999999
Q ss_pred eCCH-hhHHHHHHcCCeEEEECC
Q 023109 172 EDSV-IGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 172 GDs~-~Dv~~a~~aG~~~i~v~~ 193 (287)
||.. .|+.++..+|+.|+.|..
T Consensus 117 GDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 117 GDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred cchhhhhhhcccccCcEEEEEEE
Confidence 9999 899999999999999976
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.4e-15 Score=119.05 Aligned_cols=98 Identities=18% Similarity=0.254 Sum_probs=80.4
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
.++.++++|++++++|+.+...+...+ +.+|+..+|+ ..+++++.+.++++.+|+.+++++||||+.+|+
T Consensus 56 ~i~~L~~~Gi~v~I~T~~~~~~v~~~l-~~lgl~~~f~---------g~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~ 125 (183)
T PRK09484 56 GIRCLLTSGIEVAIITGRKSKLVEDRM-TTLGITHLYQ---------GQSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDW 125 (183)
T ss_pred HHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCceeec---------CCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 566677899999999999999999888 8888876664 135678999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeC
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVIN 209 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~ 209 (287)
.+++++|+.++ +.. ..+.....++++++
T Consensus 126 ~~a~~aG~~~~-v~~--~~~~~~~~a~~v~~ 153 (183)
T PRK09484 126 PVMEKVGLSVA-VAD--AHPLLLPRADYVTR 153 (183)
T ss_pred HHHHHCCCeEe-cCC--hhHHHHHhCCEEec
Confidence 99999999855 332 22334566788886
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.5e-16 Score=131.39 Aligned_cols=115 Identities=19% Similarity=0.187 Sum_probs=85.8
Q ss_pred HHHHHCCCCEEEEeCCChHH-HHHHHHhhcCCccccceeeccCCcC---CCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-
Q 023109 101 KHLSCHGVPMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVR---TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV- 175 (287)
Q Consensus 101 ~~l~~~g~~v~l~T~~~~~~-~~~~l~~~~gl~~~fd~i~~~~~~~---~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~- 175 (287)
..++.++-...++||.+... ....+ ...|...+|+.+.++.... .+||+|..|..+++.+++++++++||||++
T Consensus 180 ~~l~~~~g~~~i~tn~d~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~ 258 (311)
T PLN02645 180 LCIRENPGCLFIATNRDAVTHLTDAQ-EWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMVGDRLD 258 (311)
T ss_pred HHHhcCCCCEEEEeCCCCCCCCCCCC-CccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEEcCCcH
Confidence 34433233688888887643 22223 4456666777776655433 369999999999999999999999999998
Q ss_pred hhHHHHHHcCCeEEEECCCCCcccc------ccCCcEEeCCccCcCc
Q 023109 176 IGVVAGKAAGMEVVAVPSLPKQTHR------YTAADEVINSLLDLRP 216 (287)
Q Consensus 176 ~Dv~~a~~aG~~~i~v~~~~~~~~~------~~~a~~v~~~l~el~~ 216 (287)
.|+.+|+++|+.++++.+|....+. ...++++++++.++..
T Consensus 259 ~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~~ 305 (311)
T PLN02645 259 TDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFLT 305 (311)
T ss_pred HHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHHH
Confidence 8999999999999999887544322 1467999999988754
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=99.58 E-value=3.5e-15 Score=123.95 Aligned_cols=119 Identities=20% Similarity=0.245 Sum_probs=82.4
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHH--HHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEE
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIES--KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~--~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~i 171 (287)
+.....+..++ +|.+ .++||.+...... .+.....+...++...+.+....+||+|..|+.+++.+++++++++||
T Consensus 124 ~~l~~a~~~l~-~g~~-~i~tN~D~~~~~~~~~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~V 201 (249)
T TIGR01457 124 EKFATATLAIR-KGAH-FIGTNGDLAIPTERGLLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMV 201 (249)
T ss_pred HHHHHHHHHHH-CCCe-EEEECCCCCCCCCCCCCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEE
Confidence 34444455553 4555 7777776654311 000111122234555566667778999999999999999999999999
Q ss_pred eCCH-hhHHHHHHcCCeEEEECCCCCcccc--c--cCCcEEeCCccCc
Q 023109 172 EDSV-IGVVAGKAAGMEVVAVPSLPKQTHR--Y--TAADEVINSLLDL 214 (287)
Q Consensus 172 GDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~--~--~~a~~v~~~l~el 214 (287)
||++ .|+.+|+++|+.++++.++...... . ..++++++++.++
T Consensus 202 GD~~~~Di~~a~~~G~~~v~v~~G~~~~~~~~~~~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 202 GDNYLTDIRAGIDAGIDTLLVHTGVTKAEEVAGLPIAPTHVVSSLAEW 249 (249)
T ss_pred CCCchhhHHHHHHcCCcEEEEcCCCCCHHHHhcCCCCCCEEeCChhhC
Confidence 9997 8999999999999999987644332 1 3578888887653
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >COG4229 Predicted enolase-phosphatase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-13 Score=100.67 Aligned_cols=121 Identities=16% Similarity=0.119 Sum_probs=93.7
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc---CCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~---gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
+.+++|++.+.+++.++.|.++++.|.++....+-.+ .+. .+..+|++.+.. ..-.|.....|.++++..|++|
T Consensus 101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~F-ghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p 177 (229)
T COG4229 101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFF-GHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPP 177 (229)
T ss_pred ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhh-cccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCc
Confidence 5789999999999999999999999999877655444 332 344556655533 2235666788999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
.+++++.|+++.+.+|+.+|+++..+.+....+-.......++.|+.
T Consensus 178 ~eilFLSDn~~EL~AA~~vGl~t~l~~R~g~~P~~d~~~~~~~~sf~ 224 (229)
T COG4229 178 AEILFLSDNPEELKAAAGVGLATGLAVRPGNAPVPDGQGFLVYKSFE 224 (229)
T ss_pred hheEEecCCHHHHHHHHhcchheeeeecCCCCCCCCCcCceeeechh
Confidence 99999999999999999999999999885544444444455555554
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=7e-14 Score=118.02 Aligned_cols=117 Identities=14% Similarity=0.054 Sum_probs=77.7
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCCh-----HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHR-----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~-----~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+++.++++.++..+..+.++++.+. ...+... +.+++...+......+....+..++..++++++.+|+++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e 217 (272)
T PRK10530 139 FTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVE-HELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKN 217 (272)
T ss_pred eEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHh-hhcCceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHH
Confidence 45666777777666666666665432 2222222 44443211100001123344556788999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
+++|||+.||++|++.+|+.+++.+. .+..+..|++++++..+
T Consensus 218 ~i~~GD~~NDi~m~~~ag~~vamgna---~~~lk~~Ad~v~~~n~~ 260 (272)
T PRK10530 218 VVAFGDNFNDISMLEAAGLGVAMGNA---DDAVKARADLVIGDNTT 260 (272)
T ss_pred eEEeCCChhhHHHHHhcCceEEecCc---hHHHHHhCCEEEecCCC
Confidence 99999999999999999987666543 45567788999877654
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-12 Score=106.13 Aligned_cols=169 Identities=17% Similarity=0.156 Sum_probs=112.9
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhC-CCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHhhhc
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSDHLC 88 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 88 (287)
+++||+|+||++.+... .+++.++............. ....+.+..++..++.. .+.+++ .+...
T Consensus 2 LvvfDFD~TIvd~dsd~-----~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I--------~~~l~ 68 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDSDD-----WVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDI--------RDALR 68 (234)
T ss_pred EEEEeCCCCccCCccHH-----HHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHH--------HHHHH
Confidence 68999999999875532 22334444433233322222 22344444554444211 223333 33336
Q ss_pred cCCCCCcHHHHHHHH--HHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC--------------------cCC
Q 023109 89 KVKALPGANRLIKHL--SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------------------VRT 146 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l--~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~--------------------~~~ 146 (287)
.+|+.||+.++++.+ ++.|+.++|+|++...+++.++ ++.|+...|+.|++... ++.
T Consensus 69 ~ip~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL-~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~h~C~~C~~ 147 (234)
T PF06888_consen 69 SIPIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETIL-EHHGLRDCFSEIFTNPACFDADGRLRVRPYHSHGCSLCPP 147 (234)
T ss_pred cCCCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHH-HhCCCccccceEEeCCceecCCceEEEeCccCCCCCcCCC
Confidence 789999999999999 4579999999999999999999 89999999988876410 111
Q ss_pred CCCCHHHHHHHHHHc---CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 147 GKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l---~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.--|...+++.++.. |...++++||||+.||+..+.+.+-.-++.++
T Consensus 148 NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R 197 (234)
T PF06888_consen 148 NMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPR 197 (234)
T ss_pred ccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecC
Confidence 123556666666553 66778999999999999999987765455544
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.8e-14 Score=108.30 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=86.7
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-ccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~-~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+.++||+.++|+.|+ ++++++|+|+++...++..+ +++++.. +|+.+++++++...||+ |.++++.++.+|++
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il-~~l~~~~~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~ 117 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVL-DLLDPKKYFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSN 117 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHH-HHhCcCCCEeeeEEECccccccCCe---EeecHHHcCCChhc
Confidence 4678999999999998 56999999999999999999 8888864 46999999999888886 89999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEE
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
|++|||+++|+.++.++|+.+--
T Consensus 118 ~i~i~Ds~~~~~aa~~ngI~i~~ 140 (148)
T smart00577 118 VIIIDDSPDSWPFHPENLIPIKP 140 (148)
T ss_pred EEEEECCHHHhhcCccCEEEecC
Confidence 99999999999999999965543
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=6e-13 Score=102.89 Aligned_cols=123 Identities=24% Similarity=0.302 Sum_probs=92.1
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCccccceeecc-----CCcCCCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIVGS-----DEVRTGKP 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~~fd~i~~~-----~~~~~~kp 149 (287)
..+.|++.+.+..+++.|++++++||.+- ......+ ...|. .||.++.+ +.+.+.||
T Consensus 30 ~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l-~~~gv--~id~i~~Cph~p~~~c~cRKP 106 (181)
T COG0241 30 FQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL-ASQGV--KIDGILYCPHHPEDNCDCRKP 106 (181)
T ss_pred hccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHH-HHcCC--ccceEEECCCCCCCCCcccCC
Confidence 46788999999999999999999999531 1223344 33344 47777654 23678999
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-ccCCcEEeCCccCcC
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEVINSLLDLR 215 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~~a~~v~~~l~el~ 215 (287)
++..+..+++.+++++++.++|||+..|+++|.++|++.+.+.++...... ....+++..++.++.
T Consensus 107 ~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (181)
T COG0241 107 KPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTGIGVTTDGAGRAKWVFDSLAEFA 173 (181)
T ss_pred ChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcCcccccccccccccccccHHHHH
Confidence 999999999999999999999999999999999999998877774332222 223455555555543
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.47 E-value=9e-14 Score=114.70 Aligned_cols=73 Identities=27% Similarity=0.441 Sum_probs=63.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----ccCCcEEeCCccCcCcc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLRPE 217 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~~~l~el~~~ 217 (287)
-.+||.+.+|+.+++.++..++++++|||+. .||.+++++|+.+++|.+|....+. ...++++.+|+.++...
T Consensus 187 ~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~~~~~~~~p~~v~~sl~~~~~~ 264 (269)
T COG0647 187 VIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAEDLDRAEVKPTYVVDSLAELITA 264 (269)
T ss_pred ccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhhhhhhccCCcchHhhHHHHHhh
Confidence 5699999999999999999999999999999 7999999999999999998664433 35678888888887544
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=99.46 E-value=5.6e-12 Score=101.83 Aligned_cols=103 Identities=11% Similarity=0.022 Sum_probs=70.9
Q ss_pred cCCCCCcHHHHHH-HHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC----CcCC----CCCCHHHHHHHHH
Q 023109 89 KVKALPGANRLIK-HLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----EVRT----GKPSPDIFLEAAK 159 (287)
Q Consensus 89 ~~~~~~g~~~~l~-~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~----~~~~----~kp~~~~~~~~~~ 159 (287)
...++|++.+.|+ +++++|++++|+|+++...++... +..++... +.+++++ +.+. ..-..+-...+.+
T Consensus 92 ~~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia-~~~~~~~~-~~~i~t~le~~~gg~~~g~~c~g~~Kv~rl~~ 169 (210)
T TIGR01545 92 KVTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVY-FDSNFIHR-LNLIASQIERGNGGWVLPLRCLGHEKVAQLEQ 169 (210)
T ss_pred hCCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHH-Hhcccccc-CcEEEEEeEEeCCceEcCccCCChHHHHHHHH
Confidence 3468999999996 788899999999999999999888 66444222 3333432 1111 0001122233334
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.++.+.+.+.+.|||.+|+++...+|-+.++.+.
T Consensus 170 ~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vnp~ 203 (210)
T TIGR01545 170 KIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVSKR 203 (210)
T ss_pred HhCCChhheEEecCCcccHHHHHhCCCcEEECcc
Confidence 4565666888999999999999999988776655
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.45 E-value=9.5e-14 Score=114.29 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=70.4
Q ss_pred EEEEeCCChHHHHHHHHhhcCCccccceeec---cCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 110 MALASNSHRATIESKISYQHGWNESFSVIVG---SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 110 v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~---~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
+.+.++.....+...+ +..+. .+..+.+ .+-...+.+|+..+..+++.+|++++++++|||+.||++|++.+|.
T Consensus 118 ~~~~~~~~~~~~~~~l-~~~~~--~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~ 194 (230)
T PRK01158 118 VALRRTVPVEEVRELL-EELGL--DLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLEMFEVAGF 194 (230)
T ss_pred eeecccccHHHHHHHH-HHcCC--cEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhcCc
Confidence 3344444555566666 44443 1222221 2334566778899999999999999999999999999999999999
Q ss_pred eEEEECCCCCccccccCCcEEeCCccC
Q 023109 187 EVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 187 ~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.+++.+. .+..+..+++++++..+
T Consensus 195 ~vam~Na---~~~vk~~a~~v~~~n~~ 218 (230)
T PRK01158 195 GVAVANA---DEELKEAADYVTEKSYG 218 (230)
T ss_pred eEEecCc---cHHHHHhcceEecCCCc
Confidence 8887776 55667788888876543
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=99.44 E-value=2.6e-13 Score=116.90 Aligned_cols=90 Identities=22% Similarity=0.152 Sum_probs=81.8
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh----cCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ----HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~----~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
+++|+.++|+.|+++|+.++++|+++...+...+ ++ +++.++|+.+.++ .||+|+.+.++++.+|+.+++
T Consensus 32 ~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l-~~~~~~~~~~~~f~~~~~~-----~~pk~~~i~~~~~~l~i~~~~ 105 (320)
T TIGR01686 32 LHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVF-ERRKDFILQAEDFDARSIN-----WGPKSESLRKIAKKLNLGTDS 105 (320)
T ss_pred cHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHH-HhCccccCcHHHeeEEEEe-----cCchHHHHHHHHHHhCCCcCc
Confidence 4779999999999999999999999999999999 77 7888889887654 589999999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCe
Q 023109 168 SLVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~ 187 (287)
++||||++.|+.++++++-.
T Consensus 106 ~vfidD~~~d~~~~~~~lp~ 125 (320)
T TIGR01686 106 FLFIDDNPAERANVKITLPV 125 (320)
T ss_pred EEEECCCHHHHHHHHHHCCC
Confidence 99999999999999997753
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=99.43 E-value=7.5e-13 Score=119.33 Aligned_cols=92 Identities=22% Similarity=0.317 Sum_probs=80.9
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCCh------------HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~------------~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
++||+.+.|+.|++.|++++|+||... ..+...+ +++|+. |+.+++.+.....||+|..+..+++
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL-~~lgip--fdviia~~~~~~RKP~pGm~~~a~~ 274 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIV-AKLGVP--FQVFIAIGAGFYRKPLTGMWDHLKE 274 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHH-HHcCCc--eEEEEeCCCCCCCCCCHHHHHHHHH
Confidence 579999999999999999999999766 3466677 778874 8988888888889999999999999
Q ss_pred HcC----CCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 160 RLN----MEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 160 ~l~----~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
.++ +++++++||||+..|+.+++++|.
T Consensus 275 ~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~ 305 (526)
T TIGR01663 275 EANDGTEIQEDDCFFVGDAAGRPANGKAAGK 305 (526)
T ss_pred hcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence 985 899999999999999988888774
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.9e-11 Score=103.35 Aligned_cols=103 Identities=18% Similarity=0.221 Sum_probs=84.5
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc-C-------CccccceeeccCCc-----------------
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-G-------WNESFSVIVGSDEV----------------- 144 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~-g-------l~~~fd~i~~~~~~----------------- 144 (287)
+...||+.++|+.++++|++++|+||++...++..+ +++ | +.++||.++++..-
T Consensus 183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im-~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGM-KYLLGPFLGEHDWRDYFDVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhhCCcccccchHhhCcEEEeCCCCCcccCCCCceEEEeCCC
Confidence 567999999999999999999999999999999999 664 6 88999998875321
Q ss_pred CCCCCC-------H-----HHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHH-HcCCeEEEECC
Q 023109 145 RTGKPS-------P-----DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (287)
Q Consensus 145 ~~~kp~-------~-----~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~-~aG~~~i~v~~ 193 (287)
+..++. + .-.....+.+++.+++++||||+. .|+..++ .+|+.++++..
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p 324 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP 324 (343)
T ss_pred CcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence 111111 1 224667788899999999999999 7999998 99999999876
|
A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.6e-13 Score=110.42 Aligned_cols=100 Identities=18% Similarity=0.121 Sum_probs=71.4
Q ss_pred EEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeE
Q 023109 110 MALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188 (287)
Q Consensus 110 v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~ 188 (287)
..+.+..+...+...+ +.++....+ ......+......+|+..+.++++.+|++++++++|||+.||++|++.+|..+
T Consensus 110 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~~NDi~m~~~ag~~v 188 (225)
T TIGR01482 110 VKMRYGIDVDTVREII-KELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDSENDIDLFEVPGFGV 188 (225)
T ss_pred EEEeecCCHHHHHHHH-HhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCCHhhHHHHHhcCceE
Confidence 3444555555555555 555542110 00112233456778889999999999999999999999999999999999988
Q ss_pred EEECCCCCccccccCCcEEeCCccC
Q 023109 189 VAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 189 i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
++.+. .++.+..+++++++..+
T Consensus 189 am~Na---~~~~k~~A~~vt~~~~~ 210 (225)
T TIGR01482 189 AVANA---QPELKEWADYVTESPYG 210 (225)
T ss_pred EcCCh---hHHHHHhcCeecCCCCC
Confidence 88776 56677888888876543
|
catalyze the same reaction as SPP. |
| >PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.1e-12 Score=88.02 Aligned_cols=69 Identities=32% Similarity=0.484 Sum_probs=61.9
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCeEEEECCCCCcccc----ccCCcEEeCCccCc
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL 214 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs-~~Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~~~l~el 214 (287)
.+||+|..+..+++.++++++++++|||+ ..|+.+|+++|+.++++.++....+. ...++++++++.|+
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e~ 75 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDDLKEA 75 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESSGGGH
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECCHHhC
Confidence 48999999999999999999999999999 69999999999999999997665544 35889999999874
|
... |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.7e-11 Score=101.62 Aligned_cols=96 Identities=20% Similarity=0.266 Sum_probs=81.0
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccccee------eccCCcCCCCCCH---------H
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI------VGSDEVRTGKPSP---------D 152 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i------~~~~~~~~~kp~~---------~ 152 (287)
..+++.||+.++++.|+++|++++|+|++....++..+ +.+|+...+..+ +..++.-.++|.| .
T Consensus 118 ~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL-~~lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~~~K~~~ 196 (277)
T TIGR01544 118 SDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVL-RQAGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHTFNKNHD 196 (277)
T ss_pred cCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HHcCCCCcCceEEeeeEEECCCCeEeCCCCCcccccccHHH
Confidence 36899999999999999999999999999999999999 878887666666 4344555567666 5
Q ss_pred HHHHHHHHcC--CCCCcEEEEeCCHhhHHHHHHc
Q 023109 153 IFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 153 ~~~~~~~~l~--~~~~~~l~iGDs~~Dv~~a~~a 184 (287)
.+....+.++ .++++|+++|||.+|+.||...
T Consensus 197 v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 197 VALRNTEYFNQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred HHHHHHHHhCccCCcceEEEECcChhhhhHhcCC
Confidence 6667788888 8999999999999999998877
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=7.5e-12 Score=105.52 Aligned_cols=65 Identities=18% Similarity=0.118 Sum_probs=56.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.+..|..+++.+++.+|++++++++|||+.||++|.+.+|..+++.++ .++.+..|++++++..+
T Consensus 193 ~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA---~~~vK~~A~~vt~~n~~ 257 (270)
T PRK10513 193 KRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNA---IPSVKEVAQFVTKSNLE 257 (270)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCc---cHHHHHhcCeeccCCCc
Confidence 445667889999999999999999999999999999999998888876 67778889999877554
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.33 E-value=5.1e-12 Score=96.54 Aligned_cols=187 Identities=16% Similarity=0.149 Sum_probs=108.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-HHHh-C-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIV-G-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
..++|+||+|-|++..+.. .++.+..|..-...+. +..+ | .+..++++..+..+.. ......+...
T Consensus 15 ~~~aVcFDvDSTvi~eEgI-----delA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~llqp------~~~qv~~~v~ 83 (227)
T KOG1615|consen 15 SADAVCFDVDSTVIQEEGI-----DELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLLQP------LQVQVEQFVI 83 (227)
T ss_pred hcCeEEEecCcchhHHhhH-----HHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHhcc------cHHHHHHHHh
Confidence 4689999999999876432 2222233332211111 1122 1 1333444433333321 1112222222
Q ss_pred hhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc--cc--------ceeecc-CC---cCCCCCC
Q 023109 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE--SF--------SVIVGS-DE---VRTGKPS 150 (287)
Q Consensus 85 ~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~--~f--------d~i~~~-~~---~~~~kp~ 150 (287)
+ ....+.||+.+++..|+++|..++++|++.+..+..+. +.+|+.. .+ ++-+.+ +. ...+-.+
T Consensus 84 ~--~k~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va-~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsdsggK 160 (227)
T KOG1615|consen 84 K--QKPTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA-EQLGIPKSNIYANELLFDKDGKYLGFDTNEPTSDSGGK 160 (227)
T ss_pred c--CCCccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHhCCcHhhhhhheeeeccCCcccccccCCccccCCcc
Confidence 1 36788999999999999999999999999999999888 8888864 22 111222 11 1223345
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
++.+..+.+ +.+-+.++||||+.+|+++-.- |...+..+....++..+..+.+.+.++
T Consensus 161 a~~i~~lrk--~~~~~~~~mvGDGatDlea~~p-a~afi~~~g~~~r~~vk~nak~~~~~f 218 (227)
T KOG1615|consen 161 AEVIALLRK--NYNYKTIVMVGDGATDLEAMPP-ADAFIGFGGNVIREGVKANAKWYVTDF 218 (227)
T ss_pred HHHHHHHHh--CCChheeEEecCCccccccCCc-hhhhhccCCceEcHhhHhccHHHHHHH
Confidence 666666666 7788899999999999998666 333443333222333344444433333
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.2e-12 Score=104.72 Aligned_cols=49 Identities=29% Similarity=0.554 Sum_probs=45.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcE-EEEeCCH-hhHHHHHHcCCeEEEECC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSV-IGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~-l~iGDs~-~Dv~~a~~aG~~~i~v~~ 193 (287)
..+||+|..|+.++++++.+++++ +||||+. .|+.+|+++|+.++++.+
T Consensus 185 ~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~~ 235 (236)
T TIGR01460 185 VVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVLT 235 (236)
T ss_pred eecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEec
Confidence 367999999999999999998887 9999999 899999999999999865
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.5e-11 Score=98.82 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=71.0
Q ss_pred EEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEE
Q 023109 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189 (287)
Q Consensus 110 v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i 189 (287)
+++.+......+...+ +..++...... ...+-...+..+...++.+++.+|++++++++|||+.||++|++.+|+.++
T Consensus 110 ~~~~~~~~~~~~~~~l-~~~~~~~~~~~-~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ml~~ag~~va 187 (215)
T TIGR01487 110 VIMREGKDVDEVREII-KERGLNLVDSG-FAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDIDLFRVVGFKVA 187 (215)
T ss_pred EEecCCccHHHHHHHH-HhCCeEEEecC-ceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCeEE
Confidence 3444555556666666 55555332211 111233456677889999999999999999999999999999999999888
Q ss_pred EECCCCCccccccCCcEEeCCcc
Q 023109 190 AVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 190 ~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
+.+. .++.+..+++++++..
T Consensus 188 m~na---~~~~k~~A~~v~~~~~ 207 (215)
T TIGR01487 188 VANA---DDQLKEIADYVTSNPY 207 (215)
T ss_pred cCCc---cHHHHHhCCEEcCCCC
Confidence 8776 6667788888887544
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.3e-10 Score=100.17 Aligned_cols=73 Identities=14% Similarity=0.117 Sum_probs=58.2
Q ss_pred CCCCCCHHHHHHHHHHc--------CC-----CCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccc-c--ccCCcEE
Q 023109 145 RTGKPSPDIFLEAAKRL--------NM-----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH-R--YTAADEV 207 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l--------~~-----~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~-~--~~~a~~v 207 (287)
..+||++..|+.+++.+ +. ++++++||||++ .|+.+|+++|+.+++|.+|..... . ...++++
T Consensus 230 ~~GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~~~~~p~~v 309 (321)
T TIGR01456 230 TLGKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDLKECKPTLI 309 (321)
T ss_pred EcCCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCCCCCCCCEE
Confidence 45999999999988887 43 457999999999 899999999999999998733322 2 2357899
Q ss_pred eCCccCcCcc
Q 023109 208 INSLLDLRPE 217 (287)
Q Consensus 208 ~~~l~el~~~ 217 (287)
++++.|+...
T Consensus 310 v~~l~e~~~~ 319 (321)
T TIGR01456 310 VNDVFDAVTK 319 (321)
T ss_pred ECCHHHHHHH
Confidence 9999887543
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.9e-11 Score=100.98 Aligned_cols=66 Identities=18% Similarity=0.135 Sum_probs=55.6
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCc--EEeCCccC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD--EVINSLLD 213 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~--~v~~~l~e 213 (287)
..+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++.+. .++.++.|+ +++++..+
T Consensus 186 ~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA---~~~vK~~A~~~~v~~~n~e 253 (266)
T PRK10976 186 AGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNA---HQRLKDLLPELEVIGSNAD 253 (266)
T ss_pred cCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCC---cHHHHHhCCCCeecccCch
Confidence 3456678999999999999999999999999999999999999888877 566677765 67766543
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=7e-12 Score=105.35 Aligned_cols=67 Identities=19% Similarity=0.123 Sum_probs=55.9
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
...+..|..+++.+++.+|++++++++|||+.||++|.+.+|..+++.+. .+..+..++++..+..+
T Consensus 184 ~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na---~~~~k~~A~~vt~~n~~ 250 (264)
T COG0561 184 TPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNA---DEELKELADYVTTSNDE 250 (264)
T ss_pred ecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCC---CHHHHhhCCcccCCccc
Confidence 45677788899999999999999999999999999999999988888877 55666677766555543
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=2.7e-12 Score=94.76 Aligned_cols=97 Identities=21% Similarity=0.286 Sum_probs=78.0
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
-++.+.+.|++++|+|+.+...++..+ +.+|+...|-.+ +.+-..+.++++.+++.+++|.|+||..+|+
T Consensus 43 Gik~l~~~Gi~vAIITGr~s~ive~Ra-~~LGI~~~~qG~---------~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dl 112 (170)
T COG1778 43 GIKLLLKSGIKVAIITGRDSPIVEKRA-KDLGIKHLYQGI---------SDKLAAFEELLKKLNLDPEEVAYVGDDLVDL 112 (170)
T ss_pred HHHHHHHcCCeEEEEeCCCCHHHHHHH-HHcCCceeeech---------HhHHHHHHHHHHHhCCCHHHhhhhcCccccH
Confidence 356677889999999999999999999 889986544432 2245789999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
++.+..|.+++..+. .+..+..++++.
T Consensus 113 pvm~~vGls~a~~dA---h~~v~~~a~~Vt 139 (170)
T COG1778 113 PVMEKVGLSVAVADA---HPLLKQRADYVT 139 (170)
T ss_pred HHHHHcCCccccccc---CHHHHHhhHhhh
Confidence 999999988776655 344455555554
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.5e-11 Score=94.78 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=72.5
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCC-ChHHHHHHHHhhcCCc----------cccceeeccCCcCCCCCCHHHHHH
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNS-HRATIESKISYQHGWN----------ESFSVIVGSDEVRTGKPSPDIFLE 156 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~-~~~~~~~~l~~~~gl~----------~~fd~i~~~~~~~~~kp~~~~~~~ 156 (287)
..+.++|++.+.|++|+++|++++++|-+ ....++..| +.+++. ++|+..-... ..+...|++
T Consensus 42 ~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L-~~l~i~~~~~~~~~~~~~F~~~eI~~-----gsK~~Hf~~ 115 (169)
T PF12689_consen 42 EEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELL-KLLEIDDADGDGVPLIEYFDYLEIYP-----GSKTTHFRR 115 (169)
T ss_dssp -EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHH-HHTT-C----------CCECEEEESS-----S-HHHHHHH
T ss_pred CEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHH-HhcCCCccccccccchhhcchhheec-----CchHHHHHH
Confidence 36789999999999999999999999965 456778888 889998 7777643322 256789999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCC
Q 023109 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~ 196 (287)
+.+..|++.+++++|+|...++...+..|+.++.+..|-.
T Consensus 116 i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV~~v~v~~Glt 155 (169)
T PF12689_consen 116 IHRKTGIPYEEMLFFDDESRNIEVVSKLGVTCVLVPDGLT 155 (169)
T ss_dssp HHHHH---GGGEEEEES-HHHHHHHHTTT-EEEE-SSS--
T ss_pred HHHhcCCChhHEEEecCchhcceeeEecCcEEEEeCCCCC
Confidence 9999999999999999999999999999999999988643
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=99.24 E-value=6.4e-11 Score=94.55 Aligned_cols=85 Identities=21% Similarity=0.383 Sum_probs=61.3
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCC----------C---CCHHHHHHH---
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG----------K---PSPDIFLEA--- 157 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~----------k---p~~~~~~~~--- 157 (287)
+++.++++.++++|++++|+|++....++..+ +.+|+.... ++++...... . .|...++++
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~-~~~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~ 168 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIA-ERLGIDDDN--VIGNELFDNGGGIFTGRITGSNCGGKAEALKELYIR 168 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHH-HHTTSSEGG--EEEEEEECTTCCEEEEEEEEEEESHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHH-HHcCCCceE--EEEEeeeecccceeeeeECCCCCCcHHHHHHHHHHH
Confidence 55669999999999999999999999999998 788875421 2222210000 0 244455555
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHH
Q 023109 158 AKRLNMEPSSSLVIEDSVIGVVAGK 182 (287)
Q Consensus 158 ~~~l~~~~~~~l~iGDs~~Dv~~a~ 182 (287)
... +.....+++||||.+|+++++
T Consensus 169 ~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 169 DEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHH-THTCCEEEEEESSGGGHHHHH
T ss_pred hhc-CCCCCeEEEEECCHHHHHHhC
Confidence 333 788899999999999999985
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.2e-10 Score=95.00 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=42.6
Q ss_pred CCHHHHHHHHHHcCCCC-CcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 149 PSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~-~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+...++++++.+|+++ +++++|||+.||++|++.+|..+++.|.
T Consensus 190 ~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA 235 (273)
T PRK00192 190 DKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGP 235 (273)
T ss_pred CHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCC
Confidence 67788999999999999 9999999999999999999999999887
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.20 E-value=6.3e-11 Score=98.19 Aligned_cols=89 Identities=20% Similarity=0.312 Sum_probs=74.2
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHH--HHHHhhcCCcc-ccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIE--SKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~--~~l~~~~gl~~-~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
++||+.++|++|+++|++++++||++++... .++ +++|+.. .|+.+++++.... ..+..+++.++.+++++
T Consensus 25 ~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L-~~~gl~~~~~~~Ii~s~~~~~-----~~l~~~~~~~~~~~~~~ 98 (242)
T TIGR01459 25 TYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTL-KSLGINADLPEMIISSGEIAV-----QMILESKKRFDIRNGII 98 (242)
T ss_pred cCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHH-HHCCCCccccceEEccHHHHH-----HHHHhhhhhccCCCceE
Confidence 5789999999999999999999999877655 677 8889987 8999998875432 45666677888889999
Q ss_pred EEEeCCHhhHHHHHHcCC
Q 023109 169 LVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~ 186 (287)
++|||+..|+.....+|.
T Consensus 99 ~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 99 YLLGHLENDIINLMQCYT 116 (242)
T ss_pred EEeCCcccchhhhcCCCc
Confidence 999999999888766654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.7e-11 Score=103.53 Aligned_cols=68 Identities=9% Similarity=0.056 Sum_probs=56.5
Q ss_pred CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcE--EeCCccC
Q 023109 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADE--VINSLLD 213 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~--v~~~l~e 213 (287)
-...+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++.+. .++.+..|++ ++++..+
T Consensus 182 I~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na---~~~vK~~A~~~~v~~~n~e 251 (272)
T PRK15126 182 VLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNA---MPQLRAELPHLPVIGHCRN 251 (272)
T ss_pred eecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCC---hHHHHHhCCCCeecCCCcc
Confidence 345667788999999999999999999999999999999999998888776 5666777764 6665443
|
|
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.3e-11 Score=99.89 Aligned_cols=99 Identities=23% Similarity=0.385 Sum_probs=81.8
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccccee--eccCCcCCCCCCHHHHHHHHHHcCCC-CCcEE
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--VGSDEVRTGKPSPDIFLEAAKRLNME-PSSSL 169 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i--~~~~~~~~~kp~~~~~~~~~~~l~~~-~~~~l 169 (287)
++++.++++.+.++|+++ ++||.+........ .+.+...+|..+ .+.+....+||+|+.|..++++++.. +++++
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~-~~~~~g~~~~~i~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~ 217 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGI-YRYGAGYYAELIKQLGGKVIYSGKPYPAIFHKALKECSNIPKNRML 217 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCc-eEecccHHHHHHHHhCCcEecCCCCCHHHHHHHHHHcCCCCcccEE
Confidence 578889999998889997 88999887776555 666766666654 45555568999999999999999875 57999
Q ss_pred EEeCC-HhhHHHHHHcCCeEEEECC
Q 023109 170 VIEDS-VIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 170 ~iGDs-~~Dv~~a~~aG~~~i~v~~ 193 (287)
||||+ ..|+.+|+++|+.++++.+
T Consensus 218 ~vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 218 MVGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred EECCCcHHHHHHHHHCCCeEEEEeC
Confidence 99999 4999999999999998753
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=99.15 E-value=1.2e-09 Score=90.60 Aligned_cols=87 Identities=13% Similarity=0.175 Sum_probs=65.0
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccc-cceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNES-FSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~-fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
...++.||+.++++.++++|++++++|+++... ....+ ..+|+... ++.++..++ .++++.....+.+..++
T Consensus 115 ~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~L-kk~Gi~~~~~d~lllr~~---~~~K~~rr~~I~~~y~I 190 (266)
T TIGR01533 115 AQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNL-KRFGFPQADEEHLLLKKD---KSSKESRRQKVQKDYEI 190 (266)
T ss_pred CCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHH-HHcCcCCCCcceEEeCCC---CCCcHHHHHHHHhcCCE
Confidence 356789999999999999999999999987443 44666 77888754 456655432 34566677766665555
Q ss_pred CCCcEEEEeCCHhhHHHHH
Q 023109 164 EPSSSLVIEDSVIGVVAGK 182 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~ 182 (287)
+++|||+.+|+....
T Consensus 191 ----vl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 191 ----VLLFGDNLLDFDDFF 205 (266)
T ss_pred ----EEEECCCHHHhhhhh
Confidence 899999999996543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=6.8e-10 Score=87.16 Aligned_cols=101 Identities=15% Similarity=0.223 Sum_probs=83.9
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChH---------------HHHHHHHhhcCCccccceeeccC-----------CcC
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSVIVGSD-----------EVR 145 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~---------------~~~~~l~~~~gl~~~fd~i~~~~-----------~~~ 145 (287)
..|++..++.++++.|++++++|=++.. .++..+ +..+.....+.+++.. ..+
T Consensus 76 ~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~l-k~s~~~~~i~~~~~yyp~~w~~p~~y~~~g 154 (219)
T PTZ00445 76 VTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAAL-KKSKCDFKIKKVYAYYPKFWQEPSDYRPLG 154 (219)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHH-HhcCccceeeeeeeeCCcccCChhhhhhhc
Confidence 6789999999999999999999988764 455666 5545544455555432 236
Q ss_pred CCCCCHHH--H--HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDI--F--LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~--~--~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
..||+|++ | ++++++.|+.|+++++|+|+..++.+|++.|+.++.+..
T Consensus 155 l~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~ 206 (219)
T PTZ00445 155 LDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG 206 (219)
T ss_pred ccCCCccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence 78999999 8 999999999999999999999999999999999999976
|
|
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.5e-09 Score=84.84 Aligned_cols=172 Identities=15% Similarity=0.091 Sum_probs=105.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCC-HHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT-PLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (287)
+-.+++||+|-|++|.+... .+....+........+...... +.+.+..++.+++.. ...+++. .
T Consensus 12 ~ril~~FDFD~TIid~dSD~-----wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik--------~ 78 (256)
T KOG3120|consen 12 PRILLVFDFDRTIIDQDSDN-----WVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIK--------Q 78 (256)
T ss_pred CcEEEEEecCceeecCCcch-----HHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHH--------H
Confidence 34689999999999864421 1122233332222222222222 334445555554411 1233332 2
Q ss_pred hhccCCCCCcHHHHHHHHHHCCC-CEEEEeCCChHHHHHHHHhhcCCccccceeeccCC----cC-------------CC
Q 023109 86 HLCKVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VR-------------TG 147 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~-~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~----~~-------------~~ 147 (287)
.+..+|..||+.++++.+++.|. .+.|+|+++.-.++..+ +++|+.+.|+.|++... .+ +.
T Consensus 79 ~~r~iP~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~L-ea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 79 VLRSIPIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEIL-EAAGIHDLFSEIFTNPACVDASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred HHhcCCCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHH-HHccHHHHHHHHhcCCcccCCCCcEEeecCCCCCccCc
Confidence 33568999999999999999985 99999999999999999 99999999988875321 11 12
Q ss_pred CC----CHHHHHHHH---HHcCCCCCcEEEEeCCHhhHHHHHHc-CCeEEEECC
Q 023109 148 KP----SPDIFLEAA---KRLNMEPSSSLVIEDSVIGVVAGKAA-GMEVVAVPS 193 (287)
Q Consensus 148 kp----~~~~~~~~~---~~l~~~~~~~l~iGDs~~Dv~~a~~a-G~~~i~v~~ 193 (287)
.| |...+.+.. .+-|+..++.+|+||+.||+..-... +..+++-..
T Consensus 158 CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRk 211 (256)
T KOG3120|consen 158 CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRK 211 (256)
T ss_pred CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccC
Confidence 22 222222222 22267778999999999998765544 334444333
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.4e-10 Score=92.98 Aligned_cols=59 Identities=14% Similarity=0.193 Sum_probs=54.8
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHH
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~ 153 (287)
||+.++|++|+++|++++++|++.+..+...+ +.+|+..+|+.++++++....||+++.
T Consensus 149 PgV~EaL~~LkekGikLaIaTS~~Re~v~~~L-~~lGLd~YFdvIIs~Gdv~~~kp~~e~ 207 (301)
T TIGR01684 149 PRIYDSLTELKKRGCILVLWSYGDRDHVVESM-RKVKLDRYFDIIISGGHKAEEYSTMST 207 (301)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHH-HHcCCCcccCEEEECCccccCCCCccc
Confidence 78999999999999999999999999999999 999999999999999999888888643
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.09 E-value=4.7e-10 Score=102.79 Aligned_cols=68 Identities=16% Similarity=0.089 Sum_probs=59.5
Q ss_pred CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
-...+..|..+++.+++.+|++++++++|||+.||++|.+.+|..+++.|. .+..+..|++++.+..+
T Consensus 501 I~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA---~eeVK~~Ad~VT~sNdE 568 (580)
T PLN02887 501 IVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNG---AEKTKAVADVIGVSNDE 568 (580)
T ss_pred EecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCC---CHHHHHhCCEEeCCCCc
Confidence 345677788999999999999999999999999999999999998888877 66778889999877654
|
|
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.6e-10 Score=87.04 Aligned_cols=95 Identities=20% Similarity=0.291 Sum_probs=67.0
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCC---h-----------HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSH---R-----------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~---~-----------~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~ 157 (287)
..+++.+.|+++.+.|+.++|+||.. . ..++..+ +.+++. +...++.......||.+.++..+
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il-~~l~ip--~~~~~a~~~d~~RKP~~GM~~~~ 106 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENIL-KELGIP--IQVYAAPHKDPCRKPNPGMWEFA 106 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHH-HHCTS---EEEEECGCSSTTSTTSSHHHHHH
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHH-HHcCCc--eEEEecCCCCCCCCCchhHHHHH
Confidence 34589999999999999999999862 1 2233344 555554 34444444457899999999999
Q ss_pred HHHcCC----CCCcEEEEeCC-----------HhhHHHHHHcCCeEE
Q 023109 158 AKRLNM----EPSSSLVIEDS-----------VIGVVAGKAAGMEVV 189 (287)
Q Consensus 158 ~~~l~~----~~~~~l~iGDs-----------~~Dv~~a~~aG~~~i 189 (287)
++.++. +.++++||||. -.|..-|.++|++..
T Consensus 107 ~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 107 LKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp CCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred HHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 988874 88899999996 579999999998753
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=90.59 Aligned_cols=65 Identities=20% Similarity=0.136 Sum_probs=55.4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
..-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-++ .+..+..|++++++..+
T Consensus 183 ~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na---~~~~k~~a~~i~~~~~~ 247 (254)
T PF08282_consen 183 KGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNA---TPELKKAADYITPSNND 247 (254)
T ss_dssp TTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS----HHHHHHSSEEESSGTC
T ss_pred CCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCC---CHHHHHhCCEEecCCCC
Confidence 344567888999999999999999999999999999999988877766 56778888998888776
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=99.06 E-value=3.6e-09 Score=81.29 Aligned_cols=91 Identities=25% Similarity=0.255 Sum_probs=64.7
Q ss_pred CCcHHHHHHHHHHCCC--CEEEEeCCC-------hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 93 LPGANRLIKHLSCHGV--PMALASNSH-------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~--~v~l~T~~~-------~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
.|.+.+.++++++.+. .++|+||+. ...++..- +.+|+ ..+.. ...|| ..+.++++.++.
T Consensus 61 ~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~-~~lgI----pvl~h----~~kKP--~~~~~i~~~~~~ 129 (168)
T PF09419_consen 61 PPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALE-KALGI----PVLRH----RAKKP--GCFREILKYFKC 129 (168)
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHH-HhhCC----cEEEe----CCCCC--ccHHHHHHHHhh
Confidence 3445566777777765 499999983 44444444 66665 22221 23566 566777777754
Q ss_pred -----CCCcEEEEeCCH-hhHHHHHHcCCeEEEECCC
Q 023109 164 -----EPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 164 -----~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~ 194 (287)
.|+++++|||.. .|+-++..+|+.++++..|
T Consensus 130 ~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~g 166 (168)
T PF09419_consen 130 QKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTDG 166 (168)
T ss_pred ccCCCCchhEEEEcchHHHHHHHhhccCceEEEEecC
Confidence 499999999999 8999999999999998764
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.05 E-value=8.4e-10 Score=91.18 Aligned_cols=61 Identities=13% Similarity=-0.051 Sum_probs=51.0
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCc
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD 205 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~ 205 (287)
+....+.+|+..++.+++++|++++++++|||+.||+.|++.+|..+++.+. .++.+..++
T Consensus 152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~na---~~~~k~~a~ 212 (236)
T TIGR02471 152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVGNH---DPELEGLRH 212 (236)
T ss_pred EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEcCC---cHHHHHhhc
Confidence 3456778899999999999999999999999999999999999988877655 444555555
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.04 E-value=4.8e-10 Score=92.08 Aligned_cols=73 Identities=27% Similarity=0.393 Sum_probs=60.5
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccc--------cccCCcEEeCCccCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH--------RYTAADEVINSLLDL 214 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~--------~~~~a~~v~~~l~el 214 (287)
...+||.+.++..++++.+++|++|+||||+. .||..++++|++++++.+|....+ ....+|+.++++.++
T Consensus 220 ~v~GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~~~~~~~~~~PDyy~~~l~d~ 299 (306)
T KOG2882|consen 220 IVLGKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDILEAQGDNKMVPDYYADSLGDL 299 (306)
T ss_pred eecCCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHHhcccccCCCCchHHhhHHHH
Confidence 34789999999999999999999999999999 599999999999999999755322 234467777777766
Q ss_pred Cc
Q 023109 215 RP 216 (287)
Q Consensus 215 ~~ 216 (287)
..
T Consensus 300 ~~ 301 (306)
T KOG2882|consen 300 LP 301 (306)
T ss_pred hh
Confidence 44
|
|
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.03 E-value=1.7e-10 Score=89.23 Aligned_cols=73 Identities=25% Similarity=0.329 Sum_probs=59.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----ccCCcEEeCCccCcCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLRP 216 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~~~l~el~~ 216 (287)
...+||+|.+|+.+++.+|++|++++||||.. .|+-.|+.+||..+.|.+|.-++.. ...++...+++.+...
T Consensus 177 ~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~~~~p~~~~d~f~~AVd 254 (262)
T KOG3040|consen 177 TVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKPPVPPDLTADNFADAVD 254 (262)
T ss_pred EEecCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccCCCCcchhhhhHHHHHH
Confidence 44689999999999999999999999999999 5999999999999999997655522 3344666666655443
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.2e-09 Score=92.12 Aligned_cols=52 Identities=8% Similarity=-0.089 Sum_probs=46.4
Q ss_pred CCcCCCCCCHHHHHHHHHHcCC---CCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNM---EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~---~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
+-...+-.|..+++.+++.+|+ +++++++|||+.||++|.+.+|..++|.+.
T Consensus 180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~ 234 (271)
T PRK03669 180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGL 234 (271)
T ss_pred EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCC
Confidence 3345677788999999999999 999999999999999999999999888865
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.01 E-value=1.3e-08 Score=83.10 Aligned_cols=45 Identities=13% Similarity=-0.017 Sum_probs=39.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEE
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
.+..|+..++.+++.+|++++++++|||+.||++|.+.+|..+++
T Consensus 176 ~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 176 ASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 444567789999999999999999999999999999999987764
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.98 E-value=6.9e-10 Score=92.83 Aligned_cols=67 Identities=18% Similarity=0.146 Sum_probs=56.7
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
...+..|..+++.+++.++++++++++|||+.||++|++.+|+.+++.+. .+..+..+++++++..+
T Consensus 183 ~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na---~~~~k~~a~~~~~~n~~ 249 (256)
T TIGR00099 183 TAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNA---DEELKALADYVTDSNNE 249 (256)
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCc---hHHHHHhCCEEecCCCC
Confidence 45567788999999999999999999999999999999999998887654 45567778888877554
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=98.95 E-value=4.2e-10 Score=87.12 Aligned_cols=100 Identities=8% Similarity=0.055 Sum_probs=86.9
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-ccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~-~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+..+||+.++|+++.+. +.++|.|++++.+++.++ ++++... .|+.+++.+.+...+|+ +.+.+..+|.++++
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il-~~ldp~~~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~ 114 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVL-DILDRGGKVISRRLYRESCVFTNGK---YVKDLSLVGKDLSK 114 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHH-HHHCcCCCEEeEEEEccccEEeCCC---EEeEchhcCCChhh
Confidence 456899999999999987 999999999999999999 8888765 88999888877666655 67788889999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
+++|||++.++.++.++|+.+.....
T Consensus 115 vIiVDD~~~~~~~~~~NgI~i~~f~~ 140 (162)
T TIGR02251 115 VIIIDNSPYSYSLQPDNAIPIKSWFG 140 (162)
T ss_pred EEEEeCChhhhccCccCEeecCCCCC
Confidence 99999999999999999987766654
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.93 E-value=4e-09 Score=97.67 Aligned_cols=112 Identities=21% Similarity=0.223 Sum_probs=85.2
Q ss_pred CCCCCcHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 90 VKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g-~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
.+++||+.+.+++|+++| ++++++|+.+...++..+ +++|+.++|..+. +.++ .+.+++++..++++
T Consensus 383 d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~-~~lgi~~~f~~~~-------p~~K----~~~v~~l~~~~~~v 450 (556)
T TIGR01525 383 DQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA-AELGIDEVHAELL-------PEDK----LAIVKELQEEGGVV 450 (556)
T ss_pred ccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHH-HHhCCCeeeccCC-------HHHH----HHHHHHHHHcCCEE
Confidence 578999999999999999 999999999999999999 8999977665431 1222 34555555577899
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeC--CccCcCc
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRP 216 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~--~l~el~~ 216 (287)
+||||+.||++++++||+.+.+. ...+..+..+|.++. ++..+..
T Consensus 451 ~~vGDg~nD~~al~~A~vgia~g---~~~~~~~~~Ad~vi~~~~~~~l~~ 497 (556)
T TIGR01525 451 AMVGDGINDAPALAAADVGIAMG---AGSDVAIEAADIVLLNDDLSSLPT 497 (556)
T ss_pred EEEECChhHHHHHhhCCEeEEeC---CCCHHHHHhCCEEEeCCCHHHHHH
Confidence 99999999999999999555443 223334567888887 4555443
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.92 E-value=2.7e-09 Score=98.31 Aligned_cols=115 Identities=20% Similarity=0.235 Sum_probs=89.1
Q ss_pred cCCCCCcHHHHHHHHHHCCC-CEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGV-PMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~-~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
..+++||+.+.+++|+++|+ +++++|+.+...++..+ +++|+..+|..+. +.++ ...+++++..+++
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~-~~lgi~~~f~~~~-------p~~K----~~~i~~l~~~~~~ 427 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA-RELGIDEVHAELL-------PEDK----LEIVKELREKYGP 427 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHH-HHcCChhhhhccC-------cHHH----HHHHHHHHhcCCE
Confidence 35789999999999999999 99999999999999999 8899977665332 1222 4566666667789
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCcc
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~ 217 (287)
++||||+.||++++++||+.+.+.. ...+.....+|.++ +++.++...
T Consensus 428 v~~vGDg~nD~~al~~A~vgia~g~--~~~~~~~~~ad~vl~~~~l~~l~~~ 477 (536)
T TIGR01512 428 VAMVGDGINDAPALAAADVGIAMGA--SGSDVAIETADVVLLNDDLSRLPQA 477 (536)
T ss_pred EEEEeCCHHHHHHHHhCCEEEEeCC--CccHHHHHhCCEEEECCCHHHHHHH
Confidence 9999999999999999996444432 22334456788888 788887554
|
. |
| >KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.91 E-value=2e-07 Score=73.56 Aligned_cols=119 Identities=18% Similarity=0.123 Sum_probs=90.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC-------CccccceeeccCCcCCCCCCHHHHHHHHHHc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG-------WNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~g-------l~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l 161 (287)
..+.++++...++..+..|++++|.|.++....+... .+-+ +..+||.-++ .|.....|.++.+.+
T Consensus 121 k~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllf-g~s~~gdl~~y~~gyfDt~iG------~K~e~~sy~~I~~~I 193 (254)
T KOG2630|consen 121 KAHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLF-GYSDAGDLRKYISGYFDTTIG------LKVESQSYKKIGHLI 193 (254)
T ss_pred cccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHH-cccCcchHHHHhhhhhhcccc------ceehhHHHHHHHHHh
Confidence 4588999999999999999999999999888665544 4433 2234554332 566678999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccc--cCCcEEeCCccCc
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY--TAADEVINSLLDL 214 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~--~~a~~v~~~l~el 214 (287)
|.++.++++.-|.+....+|+.+|..+..+.++++..-.. ....-++.++..+
T Consensus 194 g~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPgna~l~dd~~~~y~~i~~F~~l 248 (254)
T KOG2630|consen 194 GKSPREILFLTDVPREAAAARKAGLQAGLVSRPGNAPLPDDAKVEYCVIWSFEIL 248 (254)
T ss_pred CCChhheEEeccChHHHHHHHhcccceeeeecCCCCCCCcccccceeeeccchhh
Confidence 9999999999999999999999999988887754433322 2225555666544
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-07 Score=72.45 Aligned_cols=157 Identities=17% Similarity=0.138 Sum_probs=95.4
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHH--hCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI--VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (287)
.++.|+|||+.-.+.-. .+-..+|..-........ ...+.++.+..++...+.+ .++..+. ...
T Consensus 5 vi~sDFDGTITl~Ds~~-----~itdtf~~~e~k~l~~~vls~tiS~rd~~g~mf~~i~~s--~~Eile~-------llk 70 (220)
T COG4359 5 VIFSDFDGTITLNDSND-----YITDTFGPGEWKALKDGVLSKTISFRDGFGRMFGSIHSS--LEEILEF-------LLK 70 (220)
T ss_pred EEEecCCCceEecchhH-----HHHhccCchHHHHHHHHHhhCceeHHHHHHHHHHhcCCC--HHHHHHH-------HHh
Confidence 57889999998443211 111122222111111111 1234566666777666643 2333221 124
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc-----------------eeeccCCcCCCCCCH
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-----------------VIVGSDEVRTGKPSP 151 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd-----------------~i~~~~~~~~~kp~~ 151 (287)
.+.+.||.+++++.+++++++++++|++....+...+ +..+-.+..+ .+...++...+.-+
T Consensus 71 ~i~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lf-e~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~ds~fG~dK- 148 (220)
T COG4359 71 DIKIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLF-EGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTDDSQFGHDK- 148 (220)
T ss_pred hcccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHH-HhhccccceeeeEEeecCceEcCCCceeeecCCccccCCCc-
Confidence 5789999999999999999999999999999998888 4433111111 12222222222223
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
...++.+.-+++.++|+|||..|+.+|+....
T Consensus 149 ---~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 149 ---SSVIHELSEPNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ---chhHHHhhcCCceEEEecCCcccccHhhhhhh
Confidence 23556666678889999999999999998773
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.82 E-value=7.5e-09 Score=86.56 Aligned_cols=69 Identities=9% Similarity=-0.073 Sum_probs=54.0
Q ss_pred CcCCCCCCHHHHHHHHHHcCCC--CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccC--C-cEEeCCc
Q 023109 143 EVRTGKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA--A-DEVINSL 211 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~--~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~--a-~~v~~~l 211 (287)
..+....|...++++++.++++ .+++++|||+.||++|.+.+|..+++.+.....++.+.. + +++.++.
T Consensus 170 i~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~ 243 (256)
T TIGR01486 170 VLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAP 243 (256)
T ss_pred EecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCC
Confidence 3445667788899999999999 999999999999999999999999988874322345554 3 4666553
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.77 E-value=6.7e-08 Score=80.46 Aligned_cols=52 Identities=25% Similarity=0.243 Sum_probs=43.6
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
+....+.+|+.+++.+++.++++++++++|||+.||+.|++.++..++.+.+
T Consensus 160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~n 211 (249)
T TIGR01485 160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSN 211 (249)
T ss_pred EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECC
Confidence 4456788999999999999999999999999999999999996544444433
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.7e-08 Score=93.54 Aligned_cols=111 Identities=18% Similarity=0.182 Sum_probs=82.1
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
.+++||+.+++++|++.|++++++|+.+...++..+ +++|+. +++ +. .++++ ...++.++..+++|+
T Consensus 404 d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia-~~lgi~-----~~~-~~--~p~~K----~~~v~~l~~~~~~v~ 470 (562)
T TIGR01511 404 DQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA-KELGIN-----VRA-EV--LPDDK----AALIKELQEKGRVVA 470 (562)
T ss_pred ccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCc-----EEc-cC--ChHHH----HHHHHHHHHcCCEEE
Confidence 578999999999999999999999999999999988 888984 221 11 12233 344445555778999
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeC--CccCcCc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLRP 216 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~--~l~el~~ 216 (287)
||||+.||++++++||+.+.+. ...+.....+|.++. ++.++..
T Consensus 471 ~VGDg~nD~~al~~A~vgia~g---~g~~~a~~~Advvl~~~~l~~l~~ 516 (562)
T TIGR01511 471 MVGDGINDAPALAQADVGIAIG---AGTDVAIEAADVVLMRNDLNDVAT 516 (562)
T ss_pred EEeCCCccHHHHhhCCEEEEeC---CcCHHHHhhCCEEEeCCCHHHHHH
Confidence 9999999999999999755443 223334567788884 5555543
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3 | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.4e-07 Score=83.89 Aligned_cols=104 Identities=18% Similarity=0.242 Sum_probs=70.9
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCccccceeeccCC-----------------c
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------V 144 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~--------gl~~~fd~i~~~~~-----------------~ 144 (287)
+...|.+..+|+.+++.|.++.++||++..+++..+.-.+ .+.++||.|++... .
T Consensus 182 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~ 261 (448)
T PF05761_consen 182 IHKDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTET 261 (448)
T ss_dssp EE--CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTT
T ss_pred ccCCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCC
Confidence 3457899999999999999999999999999988874333 36689999886410 0
Q ss_pred CC---------CCC----CHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHc-CCeEEEECC
Q 023109 145 RT---------GKP----SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAA-GMEVVAVPS 193 (287)
Q Consensus 145 ~~---------~kp----~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~a-G~~~i~v~~ 193 (287)
+. .++ ...-.....+.+|..+.+++||||+. .|+...+.. |+.|+++-.
T Consensus 262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~ 325 (448)
T PF05761_consen 262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP 325 (448)
T ss_dssp SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence 10 011 12335677888999999999999999 799888876 999999866
|
1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A .... |
| >PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins | Back alignment and domain information |
|---|
Probab=98.76 E-value=1e-08 Score=81.86 Aligned_cols=171 Identities=15% Similarity=0.291 Sum_probs=90.3
Q ss_pred cE-EEEecCCcccccHHHHHHHHHHHHHHcCCC--CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH--
Q 023109 10 SC-VILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS-- 84 (287)
Q Consensus 10 k~-iifDlDGTL~d~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 84 (287)
+. |++|+||||.|+...+...++ +.++.. .+.+.. .+... ...++. ...+....+.+.+.
T Consensus 2 ~i~I~iDiDgVLad~~~~~~~~~n---~~~~~~~~~~~~~~---~~~~~-------~~~~g~--~~~e~~~~~~~~~~~~ 66 (191)
T PF06941_consen 2 KIRIAIDIDGVLADFNSAFIEWFN---EEFGKNPELTPEDI---TGYWD-------WEKWGI--TEPEFYEKLWRFYEEP 66 (191)
T ss_dssp -EEEEEESBTTTB-HHHHHHHHHH---HHTTTS----GGGG---TSSSH-------HHHHHH--HSTTHHHHHHHHHTST
T ss_pred CcEEEEECCCCCcccHHHHHHHHH---HHcCCCCCCCHHHh---hhhhH-------HHHhCC--CCHHHHHHHHHHHhCh
Confidence 35 899999999999775555443 344444 222221 11011 111110 01122233333332
Q ss_pred hhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChH-------HHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHH
Q 023109 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 85 ~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~-------~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~ 157 (287)
..+..+++.||+.+.+++|.+.|..++++|+++.. .....+.++++... ++.++.+. .|.
T Consensus 67 ~~f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~hf~~i~-~~~~~~~~----~K~-------- 133 (191)
T PF06941_consen 67 GFFSNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLERHFPFIP-YDNLIFTG----DKT-------- 133 (191)
T ss_dssp TTTTT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHHHHTHHH-HCCEEEES----SGG--------
T ss_pred hhhcCCCccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHHHcCCCc-hheEEEec----CCC--------
Confidence 23467899999999999999999778877766433 22344545545322 23333321 121
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 158 ~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
.++.+ ++|+|++..+..+.+.|++++++..++.+... ....+.+..|+...
T Consensus 134 --~v~~D----vlIDD~~~n~~~~~~~g~~~iLfd~p~Nr~~~---~~~Rv~~W~ei~~~ 184 (191)
T PF06941_consen 134 --LVGGD----VLIDDRPHNLEQFANAGIPVILFDQPYNRDES---NFPRVNNWEEIEDL 184 (191)
T ss_dssp --GC--S----EEEESSSHHHSS-SSESSEEEEE--GGGTT-----TSEEE-STTSHHHH
T ss_pred --eEecc----EEecCChHHHHhccCCCceEEEEcCCCCCCCC---CCccCCCHHHHHHH
Confidence 12222 89999999999999999999999987665433 45666666665443
|
5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A .... |
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=4.6e-08 Score=81.21 Aligned_cols=51 Identities=16% Similarity=0.217 Sum_probs=46.5
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR 145 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~ 145 (287)
|++.++|++|+++|++++++|++++..+...+ +.+|+..+|+.+++++...
T Consensus 151 p~V~EtL~eLkekGikLaIvTNg~Re~v~~~L-e~lgL~~yFDvII~~g~i~ 201 (303)
T PHA03398 151 PFVYDSLDELKERGCVLVLWSYGNREHVVHSL-KETKLEGYFDIIICGGRKA 201 (303)
T ss_pred hhHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHcCCCccccEEEECCCcc
Confidence 78889999999999999999999999999999 9999999999998877543
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.71 E-value=2.9e-08 Score=96.61 Aligned_cols=124 Identities=19% Similarity=0.210 Sum_probs=96.3
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCC----------------CCCCHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT----------------GKPSPDIF 154 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~----------------~kp~~~~~ 154 (287)
+++|++.+.++.|++.|+++.++|+.+...+.... +..|+...++.++++++... ....|+-.
T Consensus 528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia-~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K 606 (884)
T TIGR01522 528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIA-RRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHK 606 (884)
T ss_pred cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCCceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHH
Confidence 78999999999999999999999999999999998 88999776666555443322 23567777
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCcc
Q 023109 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (287)
Q Consensus 155 ~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~ 217 (287)
..+.+.++..++.+.|+||+.||++++++|++.+.+... ..+-.+..+|.++ +++..+...
T Consensus 607 ~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~--g~~va~~aaDivl~dd~~~~i~~~ 669 (884)
T TIGR01522 607 MKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQT--GTDVAKEAADMILTDDDFATILSA 669 (884)
T ss_pred HHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCC--cCHHHHHhcCEEEcCCCHHHHHHH
Confidence 888888877788999999999999999999965554221 2233356789998 557766554
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.9e-08 Score=80.44 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHcCC--CCCcEEEEeCCHhhHHHHHHcCCeEEE
Q 023109 147 GKPSPDIFLEAAKRLNM--EPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~--~~~~~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
.-.++.....+++.+++ .++++++|||+.||+.|.+.+|+.+++
T Consensus 179 ~~sK~~al~~l~~~~~~~~~~~~~i~~GD~~nD~~ml~~ag~~v~v 224 (225)
T TIGR02461 179 GSDKGKAIKRLLDLYKLRPGAIESVGLGDSENDFPMFEVVDLAFLV 224 (225)
T ss_pred CCCHHHHHHHHHHHhccccCcccEEEEcCCHHHHHHHHhCCCcEec
Confidence 45556778888888876 667999999999999999999987764
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=92.07 Aligned_cols=114 Identities=16% Similarity=0.143 Sum_probs=86.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-+++|++.+.++++++.|++++++|+.+...++..+ +.+|+...|..+. |+...++++.++..+++++
T Consensus 649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia-~~lgi~~~~~~~~-----------p~~K~~~i~~l~~~~~~v~ 716 (834)
T PRK10671 649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIA-KEAGIDEVIAGVL-----------PDGKAEAIKRLQSQGRQVA 716 (834)
T ss_pred CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCCEEEeCCC-----------HHHHHHHHHHHhhcCCEEE
Confidence 377899999999999999999999999999998888 8889865443321 3344667777888889999
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEE--eCCccCcCccc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV--INSLLDLRPEK 218 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v--~~~l~el~~~~ 218 (287)
||||+.||++++++||+.+.+.+. .+.....+|.+ .+++.++...+
T Consensus 717 ~vGDg~nD~~al~~Agvgia~g~g---~~~a~~~ad~vl~~~~~~~i~~~i 764 (834)
T PRK10671 717 MVGDGINDAPALAQADVGIAMGGG---SDVAIETAAITLMRHSLMGVADAL 764 (834)
T ss_pred EEeCCHHHHHHHHhCCeeEEecCC---CHHHHHhCCEEEecCCHHHHHHHH
Confidence 999999999999999986655532 33334445444 46666665443
|
|
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.3e-07 Score=68.27 Aligned_cols=93 Identities=14% Similarity=0.204 Sum_probs=57.5
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHH---HHHHhh-----cCCccccceeeccCCc---------CCCCC---CH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQ-----HGWNESFSVIVGSDEV---------RTGKP---SP 151 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~---~~l~~~-----~gl~~~fd~i~~~~~~---------~~~kp---~~ 151 (287)
..|++.+++++++++|++++++|+++...+. ..+ .. .++. ...++++... ...+| +.
T Consensus 28 ~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l-~~~~~~~~~lp--~g~li~~~g~~~~~~~~e~i~~~~~~~K~ 104 (157)
T smart00775 28 THPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYL-SQIKQDGHNLP--HGPVLLSPDRLFAALHREVISKKPEVFKI 104 (157)
T ss_pred CCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHH-HHhhhccccCC--CceEEEcCCcchhhhhcccccCCHHHHHH
Confidence 3589999999999999999999999877764 455 33 1232 1233433321 12223 22
Q ss_pred HHHHHHHHHcCCCCCcEE-EEeCCHhhHHHHHHcCCe
Q 023109 152 DIFLEAAKRLNMEPSSSL-VIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l-~iGDs~~Dv~~a~~aG~~ 187 (287)
+.++.+.+.+.-..-.++ .+||+.+|+.+.+++|+.
T Consensus 105 ~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 105 ACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 233333333321122444 478889999999999985
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.58 E-value=2.2e-07 Score=66.74 Aligned_cols=121 Identities=12% Similarity=0.146 Sum_probs=97.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
.-.+++.+.+.+++|++. +.++++|+-....+...+ +..|+. .+.++.. .+++...++++.++-+.+-|
T Consensus 28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~la-e~~gi~--~~rv~a~-------a~~e~K~~ii~eLkk~~~k~ 96 (152)
T COG4087 28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLA-EFVGIP--VERVFAG-------ADPEMKAKIIRELKKRYEKV 96 (152)
T ss_pred CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHH-HHcCCc--eeeeecc-------cCHHHHHHHHHHhcCCCcEE
Confidence 346788999999999999 999999998877777777 777753 3444432 23567788999999888999
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccccC
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~ 220 (287)
++|||+.||+.+.++|....+.+...+.++.....+|.++.++.++.....+
T Consensus 97 vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~ 148 (152)
T COG4087 97 VMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKD 148 (152)
T ss_pred EEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhc
Confidence 9999999999999999998888877666666678889999999888765543
|
|
| >TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain | Back alignment and domain information |
|---|
Probab=98.57 E-value=5e-08 Score=74.81 Aligned_cols=80 Identities=18% Similarity=0.143 Sum_probs=63.6
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccc-ceeeccCCcCCCCCCHHHHHHHH-HHcCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAA-KRLNMEP 165 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~-~~f-d~i~~~~~~~~~kp~~~~~~~~~-~~l~~~~ 165 (287)
.+.++||+.++|+++++. +.++++|++.+.++..++ +.++.. .+| +.+++.+++.... .|-+ ..++.+.
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl-~~ldp~~~~F~~ri~~rd~~~~~~------~KdL~~i~~~d~ 127 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIA-KLIDPDGKYFGDRIISRDESGSPH------TKSLLRLFPADE 127 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHH-HHhCcCCCeeccEEEEeccCCCCc------cccHHHHcCCCc
Confidence 567899999999999865 999999999999999999 888887 478 6777776654211 2224 4467788
Q ss_pred CcEEEEeCCHh
Q 023109 166 SSSLVIEDSVI 176 (287)
Q Consensus 166 ~~~l~iGDs~~ 176 (287)
+.++.|+|++.
T Consensus 128 ~~vvivDd~~~ 138 (156)
T TIGR02250 128 SMVVIIDDRED 138 (156)
T ss_pred ccEEEEeCCHH
Confidence 89999999984
|
This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.9e-07 Score=76.50 Aligned_cols=69 Identities=10% Similarity=0.031 Sum_probs=53.1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc----CCeEEEECCCCCccccccCCcEEeCCccCcCccccC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA----GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~a----G~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~ 220 (287)
..+..|...+.++++.+++..+++++|||+.||..|.+.+ |..+.+.+. ...|.+.+++..++...+..
T Consensus 170 p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~a-------~~~A~~~l~~~~~v~~~L~~ 242 (266)
T PRK10187 170 PRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGTG-------ATQASWRLAGVPDVWSWLEM 242 (266)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECCC-------CCcCeEeCCCHHHHHHHHHH
Confidence 3455678899999999999999999999999999999998 655444333 14467888888887655433
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=98.50 E-value=4e-06 Score=67.88 Aligned_cols=103 Identities=17% Similarity=0.132 Sum_probs=62.8
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
...+..|++.++++.++++|+.++++|+.+... ....| ...|+..+ +.++-.......++.........+.+--.
T Consensus 117 ~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL-~~~G~~~~-~~LiLR~~~d~~~~~~~yKs~~R~~l~~~ 194 (229)
T TIGR01675 117 GAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNL-INAGFTGW-KHLILRGLEDSNKTVVTYKSEVRKSLMEE 194 (229)
T ss_pred CCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH-HHcCCCCc-CeeeecCCCCCCchHhHHHHHHHHHHHhC
Confidence 467899999999999999999999999998665 55566 56677653 55555432222332211112222222212
Q ss_pred CC-cEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 165 PS-SSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 165 ~~-~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.- =+..|||..+|+.+ ..+|.++.-+++
T Consensus 195 GYrIv~~iGDq~sDl~G-~~~~~RtFKLPN 223 (229)
T TIGR01675 195 GYRIWGNIGDQWSDLLG-SPPGRRTFKLPN 223 (229)
T ss_pred CceEEEEECCChHHhcC-CCccCceeeCCC
Confidence 22 24668999999955 344545544443
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.6e-06 Score=61.42 Aligned_cols=84 Identities=19% Similarity=0.174 Sum_probs=54.3
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~---~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+.||+.++++.++++|++++++||++. .....++ ...|+.-..+.++++. ......++.. .....
T Consensus 14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L-~~~Gi~~~~~~i~ts~---------~~~~~~l~~~-~~~~~ 82 (101)
T PF13344_consen 14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKL-KKLGIPVDEDEIITSG---------MAAAEYLKEH-KGGKK 82 (101)
T ss_dssp EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHH-HHTTTT--GGGEEEHH---------HHHHHHHHHH-TTSSE
T ss_pred CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHH-HhcCcCCCcCEEEChH---------HHHHHHHHhc-CCCCE
Confidence 3678999999999999999999999953 3455567 7788875556776643 2333444442 23456
Q ss_pred EEEEeCCHhhHHHHHHcCC
Q 023109 168 SLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~ 186 (287)
+.++|-. .....++.+|+
T Consensus 83 v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 83 VYVLGSD-GLREELREAGF 100 (101)
T ss_dssp EEEES-H-HHHHHHHHTTE
T ss_pred EEEEcCH-HHHHHHHHcCC
Confidence 7777754 66666777764
|
... |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=98.46 E-value=1.4e-05 Score=72.46 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=57.0
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC------------CcCCCCCCHH-HHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------------EVRTGKPSPD-IFLEAA 158 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~------------~~~~~kp~~~-~~~~~~ 158 (287)
+.+.+.+.+ +++|. .+++|++++.+++..+++.+|++ .+++++ -.+..-...+ -...+.
T Consensus 111 l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGid----~VIgTeLev~~~G~~TG~i~g~~~c~Ge~Kv~rl~ 182 (497)
T PLN02177 111 VHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGAD----KVLGTELEVSKSGRATGFMKKPGVLVGDHKRDAVL 182 (497)
T ss_pred cCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCCC----EEEecccEECcCCEEeeeecCCCCCccHHHHHHHH
Confidence 555555544 45664 59999999999999984457764 333332 1110000111 222333
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
+.+|.+... .+.|||.+|.++...++-..++-..
T Consensus 183 ~~~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~~~ 216 (497)
T PLN02177 183 KEFGDALPD-LGLGDRETDHDFMSICKEGYMVPRT 216 (497)
T ss_pred HHhCCCCce-EEEECCccHHHHHHhCCccEEeCCC
Confidence 445644334 8999999999999999977665553
|
|
| >COG4996 Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.45 E-value=2.6e-07 Score=66.34 Aligned_cols=91 Identities=18% Similarity=0.190 Sum_probs=67.8
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCC-CHHHHHHHHHH------c
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP-SPDIFLEAAKR------L 161 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp-~~~~~~~~~~~------l 161 (287)
.+.+++.+.+++..++.+|+-+..+|=+....+-+.+ ..+++..+|+.++.- +.| +...+.++++. .
T Consensus 39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aL-ral~~~~yFhy~Vie-----PhP~K~~ML~~llr~i~~er~~ 112 (164)
T COG4996 39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKAL-RALDLLQYFHYIVIE-----PHPYKFLMLSQLLREINTERNQ 112 (164)
T ss_pred EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHH-HHhchhhhEEEEEec-----CCChhHHHHHHHHHHHHHhhcc
Confidence 5789999999999999999999999988887777788 889999999998742 111 11234444443 3
Q ss_pred CCCCCcEEEEeCCHhhH-HHHHHcC
Q 023109 162 NMEPSSSLVIEDSVIGV-VAGKAAG 185 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv-~~a~~aG 185 (287)
.+.|++++|++|..--+ ..+...|
T Consensus 113 ~ikP~~Ivy~DDR~iH~~~Iwe~~G 137 (164)
T COG4996 113 KIKPSEIVYLDDRRIHFGNIWEYLG 137 (164)
T ss_pred ccCcceEEEEecccccHHHHHHhcC
Confidence 47899999999987333 2344455
|
|
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.41 E-value=3e-06 Score=75.41 Aligned_cols=50 Identities=18% Similarity=0.134 Sum_probs=43.8
Q ss_pred cCCCCCCHHHHHHHHHHc---CCCCCcEEEEeCCHhhHHHHHHcC-CeEEEECC
Q 023109 144 VRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG-MEVVAVPS 193 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l---~~~~~~~l~iGDs~~Dv~~a~~aG-~~~i~v~~ 193 (287)
...+-.|..+++.+++.+ |++++++++|||+.||++|.+.+| ..+++.|.
T Consensus 170 ~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 170 LPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred EeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCC
Confidence 445666788999999999 999999999999999999999999 67777665
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.36 E-value=3e-06 Score=81.07 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=79.8
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-+++|++.+.+++|++.|++++++|+.+...++... +.+|+..+++ .. |+-....++.++ .++.++
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia-~~lgi~~~~~----------~~--p~~K~~~v~~l~-~~~~v~ 632 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA-GELGIDFRAG----------LL--PEDKVKAVTELN-QHAPLA 632 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCeecC----------CC--HHHHHHHHHHHh-cCCCEE
Confidence 478999999999999999999999999999999888 8899852211 12 222334555555 346899
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcC
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLR 215 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~ 215 (287)
||||+.||.++++.|++.+.+.+. .+.....+|.++ +++.++.
T Consensus 633 mvGDgiNDapAl~~A~vgia~g~~---~~~a~~~adivl~~~~l~~l~ 677 (741)
T PRK11033 633 MVGDGINDAPAMKAASIGIAMGSG---TDVALETADAALTHNRLRGLA 677 (741)
T ss_pred EEECCHHhHHHHHhCCeeEEecCC---CHHHHHhCCEEEecCCHHHHH
Confidence 999999999999999977666532 333344566655 4555554
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=98.33 E-value=5.9e-07 Score=73.48 Aligned_cols=99 Identities=15% Similarity=0.183 Sum_probs=59.2
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeeccC-CcCCCC----CCHHHHHHHHHHc
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSD-EVRTGK----PSPDIFLEAAKRL 161 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~~~-~~~~~k----p~~~~~~~~~~~l 161 (287)
.+..|++.++++.++++|+.|+++|+.+... ...-| ...|...+ +.++... .....+ -+.+. ++.++.-
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL-~~~G~~~~-~~l~lr~~~~~~~~~~~~yK~~~-r~~i~~~ 190 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNL-KKAGFPGW-DHLILRPDKDPSKKSAVEYKSER-RKEIEKK 190 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHH-HHHTTSTB-SCGEEEEESSTSS------SHHH-HHHHHHT
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHH-HHcCCCcc-chhccccccccccccccccchHH-HHHHHHc
Confidence 4788999999999999999999999986553 33445 55575433 3333222 211111 12222 3333333
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHc---CCeEEEECC
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAA---GMEVVAVPS 193 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~a---G~~~i~v~~ 193 (287)
|... +++|||+.+|+..++.. +.+++.++.
T Consensus 191 Gy~I--i~~iGD~~~D~~~~~~~~~~~~r~f~lPN 223 (229)
T PF03767_consen 191 GYRI--IANIGDQLSDFSGAKTAGARAERWFKLPN 223 (229)
T ss_dssp TEEE--EEEEESSGGGCHCTHHHHHHHTTEEE-TT
T ss_pred CCcE--EEEeCCCHHHhhcccccccccceEEEcCC
Confidence 3222 78899999999994433 344555444
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2.9e-06 Score=79.46 Aligned_cols=111 Identities=12% Similarity=0.050 Sum_probs=86.1
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
+++|++.+.+++|++.|+++.++|+-+...+.++. +.+|+.+.|.. . .|+-..++.+.++-..+-+.|
T Consensus 441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGI~~v~A~---------~--~PedK~~iV~~lQ~~G~~VaM 508 (673)
T PRK14010 441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIA-KEAGVDRFVAE---------C--KPEDKINVIREEQAKGHIVAM 508 (673)
T ss_pred CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCceEEcC---------C--CHHHHHHHHHHHHhCCCEEEE
Confidence 78999999999999999999999999999999888 88898543221 2 356667777777766778999
Q ss_pred EeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCc
Q 023109 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~ 216 (287)
+||+.||.++.++|.+..++. ++ .+-.++.+|.+. +++..+..
T Consensus 509 tGDGvNDAPALa~ADVGIAMg-sG--TdvAkeAADiVLldd~ls~Iv~ 553 (673)
T PRK14010 509 TGDGTNDAPALAEANVGLAMN-SG--TMSAKEAANLIDLDSNPTKLME 553 (673)
T ss_pred ECCChhhHHHHHhCCEEEEeC-CC--CHHHHHhCCEEEcCCCHHHHHH
Confidence 999999999999999776666 32 344466777776 44544443
|
|
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.32 E-value=1.2e-06 Score=85.80 Aligned_cols=123 Identities=16% Similarity=0.108 Sum_probs=89.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc----ceeeccCC----------------cCCCCCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----SVIVGSDE----------------VRTGKPS 150 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f----d~i~~~~~----------------~~~~kp~ 150 (287)
|+++++.+.++.+++.|++++++|+.+...+.... +..|+...= ...+.+.+ .-..+..
T Consensus 537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia-~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~ 615 (917)
T TIGR01116 537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAIC-RRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVE 615 (917)
T ss_pred CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHH-HHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecC
Confidence 78999999999999999999999999988888888 888874310 11122111 1112334
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC--ccCcCcc
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDLRPE 217 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~--l~el~~~ 217 (287)
|+-..++.+.++...+.+.|+||+.||+++.+.|++.+.+. . ..+..+..+|+++.+ +..+.+.
T Consensus 616 P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~--g~~~ak~aAD~vl~dd~f~~i~~~ 681 (917)
T TIGR01116 616 PSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-S--GTEVAKEASDMVLADDNFATIVAA 681 (917)
T ss_pred HHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-C--CcHHHHHhcCeEEccCCHHHHHHH
Confidence 55667777888877788999999999999999999866554 2 234446778999977 6665543
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.6e-06 Score=69.26 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=38.5
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+..-.|...++.+++++++++++++++|||.||+.|. ..+...++|.+
T Consensus 160 lP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL-~~~~~~vvV~N 208 (247)
T PF05116_consen 160 LPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEML-EGGDHGVVVGN 208 (247)
T ss_dssp EETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHH-CCSSEEEE-TT
T ss_pred ccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHH-cCcCCEEEEcC
Confidence 45566678999999999999999999999999999999 66666676665
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=98.30 E-value=2.6e-06 Score=79.69 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=79.5
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
+++|++.+.+++|++.|++++++|+.+...+.... +.+|+.+. ++ .. .|+-.....+.+.-....+.|
T Consensus 446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA-~~lGI~~v----~a-----~~--~PedK~~~v~~lq~~g~~Vam 513 (675)
T TIGR01497 446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIA-AEAGVDDF----IA-----EA--TPEDKIALIRQEQAEGKLVAM 513 (675)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCEE----Ec-----CC--CHHHHHHHHHHHHHcCCeEEE
Confidence 78999999999999999999999999999999888 88898543 22 12 244445555666555668999
Q ss_pred EeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
+||+.||.++.+.|++.+++.+. .+..+..++.+.
T Consensus 514 vGDG~NDapAL~~AdvGiAm~~g---t~~akeaadivL 548 (675)
T TIGR01497 514 TGDGTNDAPALAQADVGVAMNSG---TQAAKEAANMVD 548 (675)
T ss_pred ECCCcchHHHHHhCCEeEEeCCC---CHHHHHhCCEEE
Confidence 99999999999999987776532 333455666665
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=5.4e-05 Score=70.20 Aligned_cols=48 Identities=6% Similarity=-0.027 Sum_probs=42.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEE--eCCHhhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVI--EDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~i--GDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
....|..+++.+++.++++.++++.| ||+.||++|.+.+|..+++-+.
T Consensus 610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~ 659 (694)
T PRK14502 610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRP 659 (694)
T ss_pred CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCC
Confidence 35667889999999999999999999 9999999999999998888655
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.2e-06 Score=78.49 Aligned_cols=111 Identities=15% Similarity=0.082 Sum_probs=85.1
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-+++||+.+.+++|++.|++++++|+-+...+..+. +.+|+++. ++ .. .|+-..+..+.++-..+-+.
T Consensus 444 D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA-~elGId~v----~A-----~~--~PedK~~iV~~lQ~~G~~Va 511 (679)
T PRK01122 444 DIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDF----LA-----EA--TPEDKLALIRQEQAEGRLVA 511 (679)
T ss_pred ccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcEE----Ec-----cC--CHHHHHHHHHHHHHcCCeEE
Confidence 378999999999999999999999999999999888 88898543 22 11 35556677777776677799
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeC--CccCcC
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLR 215 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~--~l~el~ 215 (287)
|+||+.||.++.++|.+..++. ++ .+-.++.+|.+.- ++..+.
T Consensus 512 MtGDGvNDAPALa~ADVGIAMg-sG--TdvAkeAADiVLldd~~s~Iv 556 (679)
T PRK01122 512 MTGDGTNDAPALAQADVGVAMN-SG--TQAAKEAGNMVDLDSNPTKLI 556 (679)
T ss_pred EECCCcchHHHHHhCCEeEEeC-CC--CHHHHHhCCEEEeCCCHHHHH
Confidence 9999999999999999777766 32 3444566776663 444443
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.7e-06 Score=77.77 Aligned_cols=112 Identities=21% Similarity=0.206 Sum_probs=84.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-+++|++.+.+++|++.|++++++|+-++..++.+. +.+|+++++.. .. |+-..+..+++.-....+.
T Consensus 536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA-~~lGId~v~Ae---------ll--PedK~~~V~~l~~~g~~Va 603 (713)
T COG2217 536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA-KELGIDEVRAE---------LL--PEDKAEIVRELQAEGRKVA 603 (713)
T ss_pred CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcChHhhecc---------CC--cHHHHHHHHHHHhcCCEEE
Confidence 478999999999999999999999999999999888 88998544332 22 3344566667766667899
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~ 216 (287)
||||+.||.++...|-+..++... .+-..+.+|.++ +++..+..
T Consensus 604 mVGDGINDAPALA~AdVGiAmG~G---tDvA~eaADvvL~~~dL~~v~~ 649 (713)
T COG2217 604 MVGDGINDAPALAAADVGIAMGSG---TDVAIEAADVVLMRDDLSAVPE 649 (713)
T ss_pred EEeCCchhHHHHhhcCeeEeecCC---cHHHHHhCCEEEecCCHHHHHH
Confidence 999999999999999976666652 333345566555 44555543
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=98.17 E-value=5.7e-05 Score=62.36 Aligned_cols=91 Identities=12% Similarity=0.124 Sum_probs=54.7
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeeccCCcC-CCCCCHHHH---HHHHHH
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIF---LEAAKR 160 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~~~~~~-~~kp~~~~~---~~~~~~ 160 (287)
...+..|++.++.+.+++.|++|+++|+.+... ..+-| ...|+..+ +.++-.+... ..+...... ++.+..
T Consensus 142 ~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~-~~LiLR~~~D~~~~~av~yKs~~R~~li~ 219 (275)
T TIGR01680 142 GEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTW-EKLILKDPQDNSAENAVEYKTAARAKLIQ 219 (275)
T ss_pred ccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCc-ceeeecCCCCCccchhHHHHHHHHHHHHH
Confidence 467899999999999999999999999997644 33344 45566543 5555443221 112111111 111122
Q ss_pred cCCCCCcEEEEeCCHhhHHHHH
Q 023109 161 LNMEPSSSLVIEDSVIGVVAGK 182 (287)
Q Consensus 161 l~~~~~~~l~iGDs~~Dv~~a~ 182 (287)
-|.. =+..|||..+|+.+..
T Consensus 220 eGYr--Iv~~iGDq~sDl~G~~ 239 (275)
T TIGR01680 220 EGYN--IVGIIGDQWNDLKGEH 239 (275)
T ss_pred cCce--EEEEECCCHHhccCCC
Confidence 2222 3467899999985433
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear | Back alignment and domain information |
|---|
Probab=98.16 E-value=2.5e-06 Score=65.88 Aligned_cols=85 Identities=19% Similarity=0.216 Sum_probs=59.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-ccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl-~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+..+||+.+||+.+.+. +.+++.|.++..+++.++ +.+.- ...|+.+++.+.+...+.. . .+-+..++.+.++
T Consensus 34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~-~~ldp~~~~~~~~~~r~~~~~~~~~-~--~KdL~~l~~~~~~ 108 (159)
T PF03031_consen 34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVL-DALDPNGKLFSRRLYRDDCTFDKGS-Y--IKDLSKLGRDLDN 108 (159)
T ss_dssp EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHH-HHHTTTTSSEEEEEEGGGSEEETTE-E--E--GGGSSS-GGG
T ss_pred eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHH-Hhhhhhccccccccccccccccccc-c--ccchHHHhhcccc
Confidence 456789999999999666 999999999999999999 77665 4678888877655322221 0 2556777778899
Q ss_pred EEEEeCCHhhH
Q 023109 168 SLVIEDSVIGV 178 (287)
Q Consensus 168 ~l~iGDs~~Dv 178 (287)
+++|+|++.-.
T Consensus 109 vvivDD~~~~~ 119 (159)
T PF03031_consen 109 VVIVDDSPRKW 119 (159)
T ss_dssp EEEEES-GGGG
T ss_pred EEEEeCCHHHe
Confidence 99999998643
|
It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E .... |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.2e-05 Score=67.12 Aligned_cols=45 Identities=16% Similarity=0.011 Sum_probs=35.7
Q ss_pred CCCCHHHHHHHHHHcCCC--CCcEEEEeCCHhhHHHHHHcCCeEEEE
Q 023109 147 GKPSPDIFLEAAKRLNME--PSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~~--~~~~l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
..+|....+.+.+.+... +-.++.+|||+||++|.+.+-+++++-
T Consensus 206 ~~dKg~A~~~L~~~y~~~~~~~~tiaLGDspND~~mLe~~D~~vvi~ 252 (302)
T PRK12702 206 SLPGEQAVQLLLDCYQRHLGPIKALGIGCSPPDLAFLRWSEQKVVLP 252 (302)
T ss_pred CCCHHHHHHHHHHHHHhccCCceEEEecCChhhHHHHHhCCeeEEec
Confidence 456677777777776643 338999999999999999999887763
|
|
| >PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria | Back alignment and domain information |
|---|
Probab=98.14 E-value=0.00012 Score=60.72 Aligned_cols=102 Identities=15% Similarity=0.235 Sum_probs=72.8
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCcccccee-------e--------------ccCC--c
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVI-------V--------------GSDE--V 144 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~--~~~gl~~~fd~i-------~--------------~~~~--~ 144 (287)
-..-+++.++++.+..+|+++..+|.....+....++ ..+|+. |+.- + ..++ .
T Consensus 80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~~~~~~~~~~~~~~~~~~~~~~~~~GIlf 157 (252)
T PF11019_consen 80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSSFPEDGIISFPVFDSALSRAPSFYDGILF 157 (252)
T ss_pred EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccccccCcceecccccCCCCCCceeecCeEE
Confidence 3456889999999999999999999998776655442 334543 1111 0 0000 1
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHH----HHHcCCeEEEECC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA----GKAAGMEVVAVPS 193 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~----a~~aG~~~i~v~~ 193 (287)
..+-++++.+...+...|..|+.++||+|+..++.. ++..|+...++.-
T Consensus 158 t~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y 210 (252)
T PF11019_consen 158 TGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY 210 (252)
T ss_pred eCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence 245567899999999999999999999999977765 4446777776654
|
The function is not known. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=98.11 E-value=7.3e-06 Score=78.66 Aligned_cols=111 Identities=18% Similarity=0.150 Sum_probs=83.4
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc----------------------CCCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------------RTGK 148 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~----------------------~~~k 148 (287)
+++|++.+.+++|++.|+++.++|+-+...+..+. +..|+.+. ++.+++. ...+
T Consensus 442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr 517 (755)
T TIGR01647 442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETA-RRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAE 517 (755)
T ss_pred CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe
Confidence 78999999999999999999999999999999888 88898541 1111111 1122
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
-.|+-..++.+.++-..+-+.|+||+.||.++.+.|.+..++. ++ .+-.+..+|.++
T Consensus 518 ~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~-~g--tdvAkeaADivL 574 (755)
T TIGR01647 518 VFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVA-GA--TDAARSAADIVL 574 (755)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEec-CC--cHHHHHhCCEEE
Confidence 3456666777777777788999999999999999999877764 22 333456677666
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.1e-05 Score=79.39 Aligned_cols=122 Identities=14% Similarity=0.035 Sum_probs=87.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc----------------CCCCCCHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------RTGKPSPDIF 154 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~----------------~~~kp~~~~~ 154 (287)
+++|++.+.++.|++.|++++++|+-+...+..+. +..|+...-..++.+++. -...-.|+-.
T Consensus 579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA-~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K 657 (941)
T TIGR01517 579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIA-RNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDK 657 (941)
T ss_pred CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHH
Confidence 78899999999999999999999999999999888 888985321222222211 1123345566
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeC--CccCcC
Q 023109 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN--SLLDLR 215 (287)
Q Consensus 155 ~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~--~l~el~ 215 (287)
.++.+.+.-..+-+.|+||+.||.++.++|.+..++..++ .+-.+..+|.++. ++..+.
T Consensus 658 ~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~~g--tdvAk~aADivL~dd~f~~I~ 718 (941)
T TIGR01517 658 QLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISG--TEVAKEASDIILLDDNFASIV 718 (941)
T ss_pred HHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCCCc--cHHHHHhCCEEEecCCHHHHH
Confidence 6677777666678999999999999999999777654232 2334667788876 444443
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=98.06 E-value=1.4e-05 Score=77.87 Aligned_cols=122 Identities=11% Similarity=0.080 Sum_probs=88.0
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc----------------CCCCCCHHH
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----------------RTGKPSPDI 153 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~----------------~~~kp~~~~ 153 (287)
-+++|++.+.+++|++.|+++.++|+-+...+..+. +..|+.. +.++.+.+. ....-.|+-
T Consensus 514 Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA-~~lGI~~--~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~ 590 (867)
T TIGR01524 514 DPPKESTKEAIAALFKNGINVKVLTGDNEIVTARIC-QEVGIDA--NDFLLGADIEELSDEELARELRKYHIFARLTPMQ 590 (867)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCC--CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHH
Confidence 368999999999999999999999999999998888 8889852 122222111 112234556
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCcc
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~ 217 (287)
..++.+.+.-..+.+.|+||+.||.++.+.|.+..++. ++ .+-.+..+|.++ +++..+...
T Consensus 591 K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg-~g--tdvAk~aADiVLldd~~~~I~~a 653 (867)
T TIGR01524 591 KSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVD-TA--ADIAKEASDIILLEKSLMVLEEG 653 (867)
T ss_pred HHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeC-Cc--cHHHHHhCCEEEecCChHHHHHH
Confidence 66677777666778999999999999999999877765 32 334466777777 445554443
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=1.2e-05 Score=78.39 Aligned_cols=122 Identities=15% Similarity=0.122 Sum_probs=89.9
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC----------------CCCCCHHH
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDI 153 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~----------------~~kp~~~~ 153 (287)
-+++|++.+.+++|++.|+++.++|+-+...+..+. +.+|+.. +.++.+.+.. ...-.|+-
T Consensus 549 Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA-~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~ 625 (902)
T PRK10517 549 DPPKETTAPALKALKASGVTVKILTGDSELVAAKVC-HEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFARLTPMH 625 (902)
T ss_pred CcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHH
Confidence 367899999999999999999999999999999888 8889842 2333322211 12334566
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCcc
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~ 217 (287)
..++.+.+.-..+-+.|+||+.||.++.++|.+..++. ++ .+-.+..+|.++ +++..+...
T Consensus 626 K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg-~g--tdvAkeaADiVLldd~~~~I~~a 688 (902)
T PRK10517 626 KERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVD-GA--VDIAREAADIILLEKSLMVLEEG 688 (902)
T ss_pred HHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeC-Cc--CHHHHHhCCEEEecCChHHHHHH
Confidence 67777777767778999999999999999999777765 32 334467778777 455555443
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=98.04 E-value=2e-05 Score=77.00 Aligned_cols=122 Identities=16% Similarity=0.103 Sum_probs=90.3
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC----------------CCCCCHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR----------------TGKPSPDIF 154 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~----------------~~kp~~~~~ 154 (287)
|++|++.+.+++|++.|+++.++|+-+...+..+. +.+|+.. +.++.+.+.. ...-.|+-.
T Consensus 550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA-~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K 626 (903)
T PRK15122 550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC-REVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQK 626 (903)
T ss_pred ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHH
Confidence 78899999999999999999999999999999888 8889852 2222222211 122356666
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCccc
Q 023109 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPEK 218 (287)
Q Consensus 155 ~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~~ 218 (287)
.++.+.+.-..+-+.|+||+.||.++.+.|.+..++. ++ .+-.+..+|.++ +++..+...+
T Consensus 627 ~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~g--tdvAkeaADiVLldd~f~~Iv~ai 689 (903)
T PRK15122 627 SRVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SG--ADIAKESADIILLEKSLMVLEEGV 689 (903)
T ss_pred HHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cc--cHHHHHhcCEEEecCChHHHHHHH
Confidence 7777777777778999999999999999999777665 32 333467778777 5555554443
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.3e-05 Score=57.73 Aligned_cols=92 Identities=18% Similarity=0.236 Sum_probs=63.1
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeeccCCcCCCCCCHHHH--HHHHHHcCCCCCc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF--LEAAKRLNMEPSS 167 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~--~~~~~~l~~~~~~ 167 (287)
.+-+++++.-..++|-.++.+|+.++.. +...+++.+.+......++.+| ||+|.-+ ...+..-++.
T Consensus 116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~Gd-----k~k~~qy~Kt~~i~~~~~~--- 187 (237)
T COG3700 116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAGD-----KPKPGQYTKTQWIQDKNIR--- 187 (237)
T ss_pred HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeeccC-----CCCcccccccHHHHhcCce---
Confidence 3456678888888999999999886644 3345556666765555555544 2333222 3345544444
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
++.|||-+|+-+|+.+|.+.+-+-+
T Consensus 188 -IhYGDSD~Di~AAkeaG~RgIRilR 212 (237)
T COG3700 188 -IHYGDSDNDITAAKEAGARGIRILR 212 (237)
T ss_pred -EEecCCchhhhHHHhcCccceeEEe
Confidence 8999999999999999998877655
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=98.00 E-value=2.3e-05 Score=77.68 Aligned_cols=123 Identities=11% Similarity=0.081 Sum_probs=88.7
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc----------ceeeccCCcC--------------
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF----------SVIVGSDEVR-------------- 145 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f----------d~i~~~~~~~-------------- 145 (287)
-+++|++.+.++.+++.|++++++|+.+...+..+. +..|+.... +.++++.+..
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA-~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~~ 723 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIA-QEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKALC 723 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhcC
Confidence 378999999999999999999999999999999888 888985320 1233322111
Q ss_pred --CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC--ccCcC
Q 023109 146 --TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDLR 215 (287)
Q Consensus 146 --~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~--l~el~ 215 (287)
...-.|+-...+.+.+.-..+-+.|+||+.||.++.+.|.+.+++..++ .+..+..+|.++.+ +..+.
T Consensus 724 ~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~g--t~vak~aADivl~dd~f~~I~ 795 (1053)
T TIGR01523 724 LVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGING--SDVAKDASDIVLSDDNFASIL 795 (1053)
T ss_pred eEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCc--cHHHHHhcCEEEecCCHHHHH
Confidence 1233456666677777666778999999999999999999777764332 23346677888854 44443
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.94 E-value=2.1e-05 Score=75.47 Aligned_cols=67 Identities=15% Similarity=-0.004 Sum_probs=46.2
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
..+..|..+++.+++ +.+++.+++|||+.||..|.+.++.....+..+. ....|++++++..++...
T Consensus 653 p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~----~~s~A~~~l~~~~eV~~~ 719 (726)
T PRK14501 653 PAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP----GESRARYRLPSQREVREL 719 (726)
T ss_pred ECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC----CCCcceEeCCCHHHHHHH
Confidence 344556778888887 7788999999999999999999742112222221 135678888887775443
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.94 E-value=3.2e-05 Score=75.69 Aligned_cols=105 Identities=15% Similarity=0.122 Sum_probs=82.9
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc--eeeccCCcC----------------CCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR----------------TGKPS 150 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd--~i~~~~~~~----------------~~kp~ 150 (287)
.-|+++++.+.++.|+++|+++.++|+-+...+..+. +..|+...-+ .++.+.+.. ..+-.
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa-~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvs 623 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA-KECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVS 623 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH-HHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcC
Confidence 3589999999999999999999999999999999888 8888765432 244433211 22335
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
|+-..++.+.++-...-+.|.||+.||++|.+.|.+.+.++..|
T Consensus 624 P~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~G 667 (917)
T COG0474 624 PEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEG 667 (917)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence 66777777888777888999999999999999999888777643
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00015 Score=62.46 Aligned_cols=90 Identities=18% Similarity=0.163 Sum_probs=69.3
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~---~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+.||+.++|++++++|++++++||++ .......+ +.+|+...++.++++. ......++..+.....
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l-~~lGi~~~~~~I~ts~---------~~~~~~l~~~~~~~~~ 113 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKF-ESLGLNVTEEEIFSSS---------FAAAAYLKSINFPKDK 113 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEeehH---------HHHHHHHHhhccCCCC
Confidence 357899999999999999999999987 34444456 6788877777777653 2345556666655556
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEE
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
.+|++++..+...++.+|+.++.
T Consensus 114 ~V~viG~~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 114 KVYVIGEEGILEELELAGFQYLG 136 (311)
T ss_pred EEEEEcCHHHHHHHHHCCCEEec
Confidence 78999999999999999998765
|
|
| >COG5663 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=97.88 E-value=7.1e-05 Score=56.41 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=59.6
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC-ccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW-NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl-~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
+..+..++...|..+++. .+++.+|+..+...+..- ..+-. .-.+|.+...+.. .| -.+.+..+++
T Consensus 70 e~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT~-~~l~~q~ih~~~l~i~g~h--~K------V~~vrth~id--- 136 (194)
T COG5663 70 EALLAQLVKQVLPSLKEE-HRLIYITARKADLTRITY-AWLFIQNIHYDHLEIVGLH--HK------VEAVRTHNID--- 136 (194)
T ss_pred HHHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHHH-HHHHHhccchhhhhhhccc--cc------chhhHhhccC---
Confidence 344556788888888887 578888877555433222 11111 1124443322211 11 3455666666
Q ss_pred EEEEeCCH-hhHHHHHHcCCeEEEECCCCCcc
Q 023109 168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT 198 (287)
Q Consensus 168 ~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~ 198 (287)
+++.|+. |-.+.|+++|++++.+++.+.+.
T Consensus 137 -lf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 137 -LFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred -ccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 7889998 78888999999999999966544
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=97.83 E-value=5.6e-05 Score=74.83 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=84.4
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc------------------------ceeeccCCc--
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEV-- 144 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f------------------------d~i~~~~~~-- 144 (287)
|++|++.+.+++++++|++++++|+.+...+.... +..|+...- ..++.+.+.
T Consensus 568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia-~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 646 (997)
T TIGR01106 568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKD 646 (997)
T ss_pred CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhh
Confidence 77899999999999999999999999999998888 777873210 012222211
Q ss_pred ----------------CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 145 ----------------~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
-..+-.|+-..++.+.+.-..+-+.++||+.||+++.+.|.+..++..+|. +-.+..+|.++
T Consensus 647 l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~--~vak~aADivL 724 (997)
T TIGR01106 647 MTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGS--DVSKQAADMIL 724 (997)
T ss_pred CCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCccc--HHHHHhhceEE
Confidence 113335566666666666666779999999999999999997777654432 22356678877
Q ss_pred CC
Q 023109 209 NS 210 (287)
Q Consensus 209 ~~ 210 (287)
.+
T Consensus 725 ~d 726 (997)
T TIGR01106 725 LD 726 (997)
T ss_pred ec
Confidence 65
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >KOG3110 consensus Riboflavin kinase [Coenzyme transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.81 E-value=1.1e-05 Score=57.91 Aligned_cols=43 Identities=30% Similarity=0.642 Sum_probs=37.2
Q ss_pred cCCCCCCCceeeccceeeeccCccccchhHh------HHHhhccCCCcc
Q 023109 229 EGTLPSEPWYIGGPVVKGLGRGSKLICLQRV------IQMSFQNIPRGS 271 (287)
Q Consensus 229 ~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~~ 271 (287)
.+..+..|++..|++.+||+|+|++|||||| ++....++|.|-
T Consensus 5 ~~~~~~~P~~~~g~VVrGFGRGskeLGiPTAN~~~~~v~~l~~~l~~Gv 53 (153)
T KOG3110|consen 5 AQPMSPLPLFFGGEVVRGFGRGSKELGIPTANFPENVVPKLPEDLPSGV 53 (153)
T ss_pred cccCCCCCEEecCeEEEecCCCccccCCccCCCCHHHHhcccccCCCce
Confidence 3577888999999999999999999999999 777777777773
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=3.9e-05 Score=63.78 Aligned_cols=29 Identities=14% Similarity=0.343 Sum_probs=22.4
Q ss_pred HHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 023109 97 NRLIKHLSCHGVPMALASNSHRATIESKI 125 (287)
Q Consensus 97 ~~~l~~l~~~g~~v~l~T~~~~~~~~~~l 125 (287)
.+.+++++++|+.++++|+++...+...+
T Consensus 28 ~~ai~~l~~~Gi~~viaTGR~~~~i~~~l 56 (247)
T PTZ00174 28 KDTLAKLKSKGFKIGVVGGSDYPKIKEQL 56 (247)
T ss_pred HHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 35677788889999999998877666555
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00011 Score=68.65 Aligned_cols=104 Identities=15% Similarity=0.109 Sum_probs=81.8
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc----eeeccCCcC----------------CCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVR----------------TGKP 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd----~i~~~~~~~----------------~~kp 149 (287)
-||++++.+.++.+++.|+++.++|+-+...+.++. +..|+...-+ ..+++.+.. ...-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~-r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~ 661 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIA-REIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARA 661 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHH-HHhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEec
Confidence 388999999999999999999999999999999988 8888754333 223332211 1223
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
.|....++.+.|+-..+=+.|-||+.||-++.+.|.+..++.-+|
T Consensus 662 ~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAMG~~G 706 (972)
T KOG0202|consen 662 EPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAMGISG 706 (972)
T ss_pred CchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceeecCCc
Confidence 456668888888888888999999999999999999887777554
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.68 E-value=4.9e-06 Score=69.01 Aligned_cols=45 Identities=9% Similarity=-0.163 Sum_probs=35.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCeEEEECC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGD----s~~Dv~~a~~aG~~~i~v~~ 193 (287)
...+-.|..+++.++ +++++++||| +.||++|.+.-|+.++-|..
T Consensus 184 ~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 184 FPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTS 232 (245)
T ss_pred eeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCC
Confidence 445555655555544 8999999999 69999999999998888866
|
|
| >COG2503 Predicted secreted acid phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00051 Score=55.22 Aligned_cols=87 Identities=15% Similarity=0.201 Sum_probs=57.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH-HH---HHHHhhcCCccccce-eeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT-IE---SKISYQHGWNESFSV-IVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~-~~---~~l~~~~gl~~~fd~-i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
...+.||+.+|++..-++|..|..+||++.+. .. .-+ ...|+....+. ++-- ...+++..-+..+.+
T Consensus 120 ~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nL-k~~g~~~~~~~~~llk---k~~k~Ke~R~~~v~k---- 191 (274)
T COG2503 120 KSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENL-KSEGLPQVLESHLLLK---KDKKSKEVRRQAVEK---- 191 (274)
T ss_pred ccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHH-HHcCcccccccceEEe---eCCCcHHHHHHHHhh----
Confidence 46788999999999999999999999998776 32 334 55676544332 2221 224444333333333
Q ss_pred CCCcEEEEeCCHhhHHHHHH
Q 023109 164 EPSSSLVIEDSVIGVVAGKA 183 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~ 183 (287)
.-+=++.|||+..|......
T Consensus 192 ~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 192 DYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred ccceeeEecCchhhhcchhh
Confidence 44568999999988755443
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00015 Score=53.32 Aligned_cols=30 Identities=13% Similarity=0.265 Sum_probs=25.2
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRAT 120 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~ 120 (287)
.+.+++.+.+++++++|+.++++|+.+...
T Consensus 24 ~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~ 53 (126)
T TIGR01689 24 APILAVIEKLRHYKALGFEIVISSSRNMRT 53 (126)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCchh
Confidence 456788889999999999999999987654
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.00059 Score=60.17 Aligned_cols=92 Identities=20% Similarity=0.200 Sum_probs=72.0
Q ss_pred cHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC----cCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----VRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 95 g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~----~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
....++..++++|+-++++|-++...+...+..|- |.++--++ ..+-.|+.+-++++++.+++..+..+|
T Consensus 259 ~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp------~MiLkeedfa~~~iNW~~K~eNirkIAkklNlg~dSmvF 332 (574)
T COG3882 259 TFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHP------DMILKEEDFAVFQINWDPKAENIRKIAKKLNLGLDSMVF 332 (574)
T ss_pred HHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCC------CeEeeHhhhhhheecCCcchhhHHHHHHHhCCCccceEE
Confidence 44568889999999999999999988888884442 33333222 235678899999999999999999999
Q ss_pred EeCCHhhHHHHHHcCCeEEEECC
Q 023109 171 IEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
++|++...+--++-+- +.+++-
T Consensus 333 iDD~p~ErE~vk~~~~-v~Vi~~ 354 (574)
T COG3882 333 IDDNPAERELVKRELP-VSVIEF 354 (574)
T ss_pred ecCCHHHHHHHHhcCc-eeeccC
Confidence 9999999888888875 444443
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0003 Score=68.14 Aligned_cols=68 Identities=12% Similarity=-0.025 Sum_probs=47.6
Q ss_pred CCCCCHHHHHHHHH---HcCCCCCcEEEEeCCHhhHHHHHHcCC-------------eEEEECCCCCccccccCCcEEeC
Q 023109 146 TGKPSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGM-------------EVVAVPSLPKQTHRYTAADEVIN 209 (287)
Q Consensus 146 ~~kp~~~~~~~~~~---~l~~~~~~~l~iGDs~~Dv~~a~~aG~-------------~~i~v~~~~~~~~~~~~a~~v~~ 209 (287)
.+..|+..++++++ .+|..++.+++|||+.||..|.+.++- -++-|.. ....|.+.++
T Consensus 759 ~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG~------~~S~A~y~L~ 832 (854)
T PLN02205 759 QGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVGQ------KPSKAKYYLD 832 (854)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEECC------CCccCeEecC
Confidence 45556777777764 468899999999999999999998862 2222322 1345677788
Q ss_pred CccCcCcccc
Q 023109 210 SLLDLRPEKW 219 (287)
Q Consensus 210 ~l~el~~~~~ 219 (287)
+..++...+.
T Consensus 833 d~~eV~~lL~ 842 (854)
T PLN02205 833 DTAEIVRLMQ 842 (854)
T ss_pred CHHHHHHHHH
Confidence 8877765543
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00043 Score=54.89 Aligned_cols=39 Identities=15% Similarity=0.079 Sum_probs=34.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl 131 (287)
-.+|++.+||+.+.+. +.++|.|+++..+++.++ ..+++
T Consensus 45 ~kRP~l~eFL~~~~~~-feIvVwTAa~~~ya~~~l-~~l~~ 83 (195)
T TIGR02245 45 LMRPYLHEFLTSAYED-YDIVIWSATSMKWIEIKM-TELGV 83 (195)
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEecCCHHHHHHHH-HHhcc
Confidence 4689999999999885 999999999999999999 76664
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00034 Score=66.10 Aligned_cols=113 Identities=19% Similarity=0.193 Sum_probs=82.4
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-+++|++...++.|++.|++++++|+-+...+++.. +..| ++.|++ + .+|. -.....+.+......+.
T Consensus 722 D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA-~~VG----i~~V~a-e----v~P~--~K~~~Ik~lq~~~~~Va 789 (951)
T KOG0207|consen 722 DQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVA-QQVG----IDNVYA-E----VLPE--QKAEKIKEIQKNGGPVA 789 (951)
T ss_pred cccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHH-HhhC----cceEEe-c----cCch--hhHHHHHHHHhcCCcEE
Confidence 368999999999999999999999999999999888 7777 466654 2 2332 22445556665667899
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCcc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~ 217 (287)
||||+.||-++...|.+..+.... .+-..+.+|.+. +++.++...
T Consensus 790 MVGDGINDaPALA~AdVGIaig~g---s~vAieaADIVLmrn~L~~v~~a 836 (951)
T KOG0207|consen 790 MVGDGINDAPALAQADVGIAIGAG---SDVAIEAADIVLMRNDLRDVPFA 836 (951)
T ss_pred EEeCCCCccHHHHhhccceeeccc---cHHHHhhCCEEEEccchhhhHHH
Confidence 999999999999999876665544 222334555544 566665544
|
|
| >KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00062 Score=57.51 Aligned_cols=103 Identities=15% Similarity=0.203 Sum_probs=74.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc---CCccccceeeccCCcC-----CCCCC-----------
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH---GWNESFSVIVGSDEVR-----TGKPS----------- 150 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~---gl~~~fd~i~~~~~~~-----~~kp~----------- 150 (287)
+...|...++|+.|+++|.++.++||++.+.++.-+ +.+ .+.+.||.|+.--+-+ ..+|-
T Consensus 239 i~r~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM-~flvG~~WRdlFDVVIvqA~KP~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 239 IERNPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGM-RFLVGDDWRDLFDVVIVQANKPEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred hhccHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCc-eeeeCccHHhhhheeEEecCCCcccccccCcchhhcccccchh
Confidence 456788999999999999999999999999988665 332 3556789887532110 01110
Q ss_pred --------------HHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHH-HcCCeEEEECC
Q 023109 151 --------------PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (287)
Q Consensus 151 --------------~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~-~aG~~~i~v~~ 193 (287)
...+...++.-|....+++|+||++ +|+.... ..|+++..+-.
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 0113445666788899999999999 7998887 88887766543
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00057 Score=56.42 Aligned_cols=49 Identities=16% Similarity=0.274 Sum_probs=43.9
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 142 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~ 142 (287)
.|.+.+.|.+|++.|..+++=|-++++++...+ +..++.++||.+++..
T Consensus 144 ~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl-~~~~L~~~Fd~ii~~G 192 (297)
T PF05152_consen 144 DPAVYDSLRELKEQGCVLVLWSYGNREHVRHSL-KELKLEGYFDIIICGG 192 (297)
T ss_pred ChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHH-HHhCCccccEEEEeCC
Confidence 456678899999999999999999999999999 8889999999998764
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00013 Score=58.63 Aligned_cols=47 Identities=21% Similarity=0.152 Sum_probs=42.9
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEE
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
.+.+.+|+..++.+++.++++++++++|||+.||+.+++.+|+.+++
T Consensus 158 ~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 158 LPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 45678899999999999999999999999999999999999987764
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00046 Score=60.36 Aligned_cols=100 Identities=17% Similarity=0.117 Sum_probs=84.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCC--ChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNS--HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~--~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
-+.....++.+.+.+.|.+|+++|+. +.+..+..+ ..+|.+..--.++.|.+....|.++..|..+++.-+++|...
T Consensus 99 ypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L-~s~g~d~~nipiY~S~e~rl~KnSg~LFk~Vlk~EnVd~~~w 177 (635)
T COG5610 99 YPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFL-NSFGPDFNNIPIYMSSEFRLKKNSGNLFKAVLKLENVDPKKW 177 (635)
T ss_pred eccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHH-HhcCCCccCceeeecceeehhcccchHHHHHHhhcCCChhhe
Confidence 45566788999999999999999998 666677777 777765443446788888889999999999999999999999
Q ss_pred EEEeCCH-hhHHHHHHcCCeEEEE
Q 023109 169 LVIEDSV-IGVVAGKAAGMEVVAV 191 (287)
Q Consensus 169 l~iGDs~-~Dv~~a~~aG~~~i~v 191 (287)
+++||+. .|..+++..|+.|...
T Consensus 178 ~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 178 IHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred EEecCchhhhhcCccccchhHHHH
Confidence 9999999 7999999999887654
|
|
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0017 Score=64.88 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=74.8
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceee------------------------------
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV------------------------------ 139 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~------------------------------ 139 (287)
-++.|++.+.++++++.|++++++|+.+...+..+. +..|+...-+.++
T Consensus 655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA-~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVA-RECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQV 733 (1054)
T ss_pred cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccc
Confidence 478999999999999999999999999999999888 7888742211111
Q ss_pred -----------------------ccCCc-------------------CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhh
Q 023109 140 -----------------------GSDEV-------------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177 (287)
Q Consensus 140 -----------------------~~~~~-------------------~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~D 177 (287)
++++. -..+-.|+-...+.+.+.-...-+.|+||+.||
T Consensus 734 ~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND 813 (1054)
T TIGR01657 734 EIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGAND 813 (1054)
T ss_pred cccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHH
Confidence 11000 001223455555666666666789999999999
Q ss_pred HHHHHHcCCeEEEECC
Q 023109 178 VVAGKAAGMEVVAVPS 193 (287)
Q Consensus 178 v~~a~~aG~~~i~v~~ 193 (287)
+.+.++|.+...+...
T Consensus 814 ~~ALK~AdVGIam~~~ 829 (1054)
T TIGR01657 814 CGALKQADVGISLSEA 829 (1054)
T ss_pred HHHHHhcCcceeeccc
Confidence 9999999977777544
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PLN02499 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0042 Score=55.79 Aligned_cols=87 Identities=11% Similarity=0.021 Sum_probs=50.2
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC--------cC--CCCCCHHH-HHHHHHHcCCCCCc
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE--------VR--TGKPSPDI-FLEAAKRLNMEPSS 167 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~--------~~--~~kp~~~~-~~~~~~~l~~~~~~ 167 (287)
..+..++.| +++++|++++.+++..+++++|. |.|++.+- .+ .++.-.+. ...+.+.++ +...
T Consensus 101 ~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG~----D~VvGTEL~v~~~G~~TG~~~G~n~~ek~~~rl~~~~g-~~~~ 174 (498)
T PLN02499 101 AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLRA----DEVIGSELVVNRFGFATGFIRGTDVDQSVANRVANLFV-DERP 174 (498)
T ss_pred HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcCC----ceEEeeeEEEeeccEEEEEEecCccHHHHHHHHHHHhC-ccCc
Confidence 455666777 99999999999999999666775 44443321 00 11111222 333444455 2234
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+-+||+..|-.-..- |+-+++.+
T Consensus 175 ~vg~~~~~~~~~f~~~--ck~~~~~~ 198 (498)
T PLN02499 175 QLGLGRISASSSFLSL--CKEQIHPP 198 (498)
T ss_pred eecccCCcccchhhhh--CceEEecC
Confidence 6777887766555444 33444444
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00021 Score=59.25 Aligned_cols=67 Identities=13% Similarity=-0.036 Sum_probs=53.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc-------CCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-------GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~a-------G~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
...|+..++++++.++..++.++||||+.+|+.+++.+ |..++.+..+ ..+..+++++++..++...
T Consensus 165 ~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g----~~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 165 FVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG----SKKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC----CcCCCceEeCCCHHHHHHH
Confidence 33456899999999999999999999999999999999 6666666532 2346688999988886543
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.0017 Score=59.75 Aligned_cols=98 Identities=17% Similarity=0.110 Sum_probs=74.2
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-++.+++.+.++++++.|++++++|+.+...+.... +.+|+ + .. -.|+-..+..+.+.-....+.
T Consensus 346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia-~~lgi-------~-----~~--~~p~~K~~~v~~l~~~g~~v~ 410 (499)
T TIGR01494 346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA-KELGI-------F-----AR--VTPEEKAALVEALQKKGRVVA 410 (499)
T ss_pred CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCc-------e-----ec--cCHHHHHHHHHHHHHCCCEEE
Confidence 478999999999999999999999999999888877 77775 1 11 234444555555554557899
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
++||+.||.++.+.|++...+. ....+|.++.+
T Consensus 411 ~vGDg~nD~~al~~Advgia~~--------a~~~adivl~~ 443 (499)
T TIGR01494 411 MTGDGVNDAPALKKADVGIAMG--------AKAAADIVLLD 443 (499)
T ss_pred EECCChhhHHHHHhCCCccccc--------hHHhCCeEEec
Confidence 9999999999999999765543 23446666654
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0029 Score=48.15 Aligned_cols=90 Identities=23% Similarity=0.286 Sum_probs=54.1
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHH---HHHHhhc-----CCccccce-eecc-C--------CcCCCCCCHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQH-----GWNESFSV-IVGS-D--------EVRTGKPSPDI 153 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~---~~l~~~~-----gl~~~fd~-i~~~-~--------~~~~~kp~~~~ 153 (287)
..+|+.++.+.+++.|+++.-+|+.+-..+. ..+ ... ++. ++ ++.+ + ++-.. +|+.
T Consensus 28 ~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L-~~~~q~~~~lP---~Gpv~~sP~~l~~al~rEvi~~--~p~~ 101 (157)
T PF08235_consen 28 THPGAAELYRKIADNGYKILYLTARPIGQANRTRSWL-AQHQQQGHNLP---DGPVLLSPDSLFSALHREVISK--DPEE 101 (157)
T ss_pred hhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHH-HHHHhCCccCC---CCCEEECCcchhhhhhcccccc--ChHH
Confidence 4579999999999999999999999754433 333 222 232 22 1111 1 22222 3444
Q ss_pred HHH-HHHHc-CCCC----CcEEEEeCCHhhHHHHHHcCCe
Q 023109 154 FLE-AAKRL-NMEP----SSSLVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 154 ~~~-~~~~l-~~~~----~~~l~iGDs~~Dv~~a~~aG~~ 187 (287)
|+. .++.+ ...| .=...+|++.+|+.+=+++|++
T Consensus 102 fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 102 FKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 332 33333 2211 2345579999999999999985
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.00034 Score=69.93 Aligned_cols=127 Identities=15% Similarity=0.119 Sum_probs=82.9
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc--------------------------------
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS-------------------------------- 136 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd-------------------------------- 136 (287)
+-++.+|+.+.++.|++.|++++++|+-....+..+. ...|+...=.
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA-~~~~ii~~~~~~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~ 707 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIG-YSCRLLSRNMEQIVITSESLDATRSVEAAIKFGLEGTSEEFN 707 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCCCCCCCeEEEEecCchhhhHHHHHHHHHHHHHHHHhhh
Confidence 3488999999999999999999999999888888777 5556532110
Q ss_pred ---------eeeccCCc----------------------CCCCCCHHHHHHHHHHcCCC-CCcEEEEeCCHhhHHHHHHc
Q 023109 137 ---------VIVGSDEV----------------------RTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 137 ---------~i~~~~~~----------------------~~~kp~~~~~~~~~~~l~~~-~~~~l~iGDs~~Dv~~a~~a 184 (287)
-++.++.. -..+-.|+-..++.+.+.-. ..-++++||+.||+.|.++|
T Consensus 708 ~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~A 787 (1057)
T TIGR01652 708 NLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEA 787 (1057)
T ss_pred hhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhc
Confidence 01221100 01122333334444444443 56899999999999999999
Q ss_pred CCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 185 G~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
.+.+ .+.. .........+|+++.++..+.+.+
T Consensus 788 dVGI-gi~g-~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 788 DVGV-GISG-KEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred Ceee-EecC-hHHHHHHHhhhhhhhhHHHHHHHH
Confidence 8666 2222 222234567899998877665544
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG2469 consensus IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.016 Score=50.31 Aligned_cols=102 Identities=19% Similarity=0.203 Sum_probs=72.2
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC--CccccceeeccC-------------C-------------
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG--WNESFSVIVGSD-------------E------------- 143 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~g--l~~~fd~i~~~~-------------~------------- 143 (287)
..+....++..+++.|.++.++||+...+....+..++| +..+||.++... +
T Consensus 199 ~d~~~v~~l~~~r~sGKk~fl~Tns~~~ytd~~mt~~~~~dW~~yfd~v~~~a~Kp~ff~e~~vlreV~t~~g~l~~g~~ 278 (424)
T KOG2469|consen 199 YDGTIVPLLSMLRDSGKKTFLHTNSDWDYTDIFMAFHYGFDWETYFDLVETRAAKPGFFHEGTVLREVEPQEGLLKNGDN 278 (424)
T ss_pred ecCccccchHHHHhhccceEEeeccccchhhHHHHHHhCCCcceeEEEEEEeccCCccccccceeeeecccccccccccc
Confidence 344455589999999999999999988887766645554 667888765431 0
Q ss_pred ----cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHH-HHHHcCCeEEEECC
Q 023109 144 ----VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVV-AGKAAGMEVVAVPS 193 (287)
Q Consensus 144 ----~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~-~a~~aG~~~i~v~~ 193 (287)
-..+.+++.....++..++....+++|+||+. .|+- ..+.-|+.++.+..
T Consensus 279 ~~p~e~~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~p 334 (424)
T KOG2469|consen 279 TGPLEQGGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAP 334 (424)
T ss_pred CCcchhcccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEeh
Confidence 01233455667788888898889999999998 4543 45566777766654
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.00093 Score=67.01 Aligned_cols=128 Identities=16% Similarity=0.118 Sum_probs=79.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc---------------------------------
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--------------------------------- 135 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--------------------------------- 135 (287)
.-++.+|+.+.++.++++|++++++|+-....+..+. ...++-..-
T Consensus 724 ~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA-~s~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~ 802 (1178)
T PLN03190 724 EDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIG-YSSKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSG 802 (1178)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHhCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhcccccc
Confidence 3489999999999999999999999998877766665 433331100
Q ss_pred ----------------ceeeccCCc----------------------CCCCCCHHHHHHHHHHcCCC-CCcEEEEeCCHh
Q 023109 136 ----------------SVIVGSDEV----------------------RTGKPSPDIFLEAAKRLNME-PSSSLVIEDSVI 176 (287)
Q Consensus 136 ----------------d~i~~~~~~----------------------~~~kp~~~~~~~~~~~l~~~-~~~~l~iGDs~~ 176 (287)
..++.+... -..+-.|.-...+.+.+.-. ..-++++||+.|
T Consensus 803 ~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaN 882 (1178)
T PLN03190 803 ISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGAN 882 (1178)
T ss_pred ccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcc
Confidence 011111000 00111222223333333322 346899999999
Q ss_pred hHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcccc
Q 023109 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 177 Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~ 219 (287)
|+.|.++|.+.+ ++ .|.........+|+.++.+..+.++++
T Consensus 883 Dv~mIq~AdVGI-GI-sG~EG~qA~~aSDfaI~~Fr~L~rLLl 923 (1178)
T PLN03190 883 DVSMIQMADVGV-GI-SGQEGRQAVMASDFAMGQFRFLVPLLL 923 (1178)
T ss_pred hHHHHHhcCeee-ee-cCchhHHHHHhhccchhhhHHHHHHHH
Confidence 999999998655 32 233333445677999999888766653
|
|
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.007 Score=50.55 Aligned_cols=89 Identities=22% Similarity=0.272 Sum_probs=56.6
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
..++||+.++|+.|+++|++++++||++... ..+.+....+++...+.+++|.... ...+++. .++.
T Consensus 23 ~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at---------~~~l~~~-~~~~ 92 (269)
T COG0647 23 NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDAT---------ADYLAKQ-KPGK 92 (269)
T ss_pred CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHH---------HHHHHhh-CCCC
Confidence 3578999999999999999999999996543 4456623356666677777764321 2222221 1225
Q ss_pred cEEEEeCCHhhHHHHHHcCCeEE
Q 023109 167 SSLVIEDSVIGVVAGKAAGMEVV 189 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~~i 189 (287)
.|.+|| ...+.+.++.+|+..+
T Consensus 93 kv~viG-~~~l~~~l~~~G~~~~ 114 (269)
T COG0647 93 KVYVIG-EEGLKEELEGAGFELV 114 (269)
T ss_pred EEEEEC-CcchHHHHHhCCcEEe
Confidence 566666 3345566666665443
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0047 Score=49.58 Aligned_cols=34 Identities=24% Similarity=0.314 Sum_probs=29.2
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~ 128 (287)
+.+.+.|++++++|.+++++|+++...+...+ +.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~-~~ 53 (204)
T TIGR01484 20 PETIEALERLREAGVKVVLVTGRSLAEIKELL-KQ 53 (204)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-Hh
Confidence 45667899999999999999999999988877 44
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0049 Score=55.09 Aligned_cols=91 Identities=14% Similarity=0.132 Sum_probs=72.0
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
...||.+|-+.++|+.|++.+.+|+-++-.+..+. ...|++++.. ..+ |+-..+++++-+-...=+.|
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA-~EAGVDdfiA---------eat--PEdK~~~I~~eQ~~grlVAM 514 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA-AEAGVDDFIA---------EAT--PEDKLALIRQEQAEGRLVAM 514 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHH-HHhCchhhhh---------cCC--hHHHHHHHHHHHhcCcEEEE
Confidence 35799999999999999999999999988888777 6678754332 123 44556667777777778999
Q ss_pred EeCCHhhHHHHHHcCCeEEEECC
Q 023109 171 IEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.||+.||.++..+|....++.+.
T Consensus 515 tGDGTNDAPALAqAdVg~AMNsG 537 (681)
T COG2216 515 TGDGTNDAPALAQADVGVAMNSG 537 (681)
T ss_pred cCCCCCcchhhhhcchhhhhccc
Confidence 99999999999999976666544
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.02 Score=48.55 Aligned_cols=87 Identities=21% Similarity=0.229 Sum_probs=59.3
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~---~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
+.||+.++|++++++|++++++||++. ......+ ..+|+....+.++++. ......++.....+..+
T Consensus 19 ~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l-~~~G~~~~~~~i~ts~---------~~~~~~l~~~~~~~~~v 88 (279)
T TIGR01452 19 VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKF-ARLGFNGLAEQLFSSA---------LCAARLLRQPPDAPKAV 88 (279)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEecHH---------HHHHHHHHhhCcCCCEE
Confidence 567899999999999999999999653 3333466 6678765455555432 33344555544445679
Q ss_pred EEEeCCHhhHHHHHHcCCeEE
Q 023109 169 LVIEDSVIGVVAGKAAGMEVV 189 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i 189 (287)
+++|+. .....++..|+..+
T Consensus 89 ~~iG~~-~~~~~l~~~g~~~~ 108 (279)
T TIGR01452 89 YVIGEE-GLRAELDAAGIRLA 108 (279)
T ss_pred EEEcCH-HHHHHHHHCCCEEe
Confidence 999985 34556678887755
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.1 Score=41.96 Aligned_cols=41 Identities=20% Similarity=0.181 Sum_probs=32.7
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl 131 (287)
...+.||+.+.++.+.+. .+-+++|.+-..++++.. ++.|+
T Consensus 81 sa~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a-~~ig~ 121 (315)
T COG4030 81 SAKLVPGAEETMATLQER-WTPVVISTSYTQYLRRTA-SMIGV 121 (315)
T ss_pred hcccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHH-HhcCC
Confidence 367889999999999887 677888888777777776 76665
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.21 E-value=0.015 Score=55.13 Aligned_cols=113 Identities=15% Similarity=0.099 Sum_probs=72.5
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccce--eeccCCcC------------------CCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSDEVR------------------TGKP 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~--i~~~~~~~------------------~~kp 149 (287)
-|.+||+.+.++.+++.|+++-.+|+.+-..++++. ..+|+...=+. .+-+.+.. ...|
T Consensus 646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA-~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP 724 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIA-RECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP 724 (1034)
T ss_pred CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHH-HHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC
Confidence 378999999999999999999999999999999888 77886432221 11111111 1112
Q ss_pred CHHHHHHHHHHcCCCCCcEEEE-eCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVI-EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~i-GDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
. -...+.+.+. ...++++| ||+.||-++.++|.+..+|.-+|. +-.++.+|.++
T Consensus 725 ~--DK~lLVk~L~-~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGT--eVAKEaSDIIi 779 (1034)
T KOG0204|consen 725 N--DKHLLVKGLI-KQGEVVAVTGDGTNDAPALKEADVGLAMGIAGT--EVAKEASDIII 779 (1034)
T ss_pred c--hHHHHHHHHH-hcCcEEEEecCCCCCchhhhhcccchhccccch--hhhhhhCCeEE
Confidence 1 1111112222 22355555 999999999999997777665543 22345556665
|
|
| >TIGR01658 EYA-cons_domain eyes absent protein conserved domain | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.041 Score=44.66 Aligned_cols=80 Identities=14% Similarity=0.038 Sum_probs=58.3
Q ss_pred EEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCe
Q 023109 110 MALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 110 v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~ 187 (287)
-++||++.---.-.+. -.+++...| +.|+++-. .++...|+++.+++|-+...+++|||+...-.+|+..+++
T Consensus 178 NvLVTs~qLVPaLaKc-LLy~L~~~f~ieNIYSa~k----vGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~wP 252 (274)
T TIGR01658 178 NVLVTSGQLIPSLAKC-LLFRLDTIFRIENVYSSIK----VGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMNWP 252 (274)
T ss_pred EEEEEcCccHHHHHHH-HHhccCCccccccccchhh----cchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcCCC
Confidence 3566665433222222 235666655 56666543 3457899999999998788999999999999999999999
Q ss_pred EEEECCC
Q 023109 188 VVAVPSL 194 (287)
Q Consensus 188 ~i~v~~~ 194 (287)
++-+...
T Consensus 253 Fw~I~~h 259 (274)
T TIGR01658 253 FVKIDLH 259 (274)
T ss_pred eEEeecC
Confidence 9988874
|
This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences. |
| >KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.047 Score=47.23 Aligned_cols=96 Identities=17% Similarity=0.216 Sum_probs=59.5
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCCh------------HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHR------------ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~------------~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
.+.+.+..=|+.+.+.|+.+++.||... ..++.+. ..+++. |....+.-.....||.........
T Consensus 104 ~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~-anl~vP--i~~~~A~~~~~yRKP~tGMwe~~~ 180 (422)
T KOG2134|consen 104 ILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV-ANLGVP--IQLLAAIIKGKYRKPSTGMWEFLK 180 (422)
T ss_pred eeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH-HhcCCc--eEEeeeccCCcccCcchhHHHHHH
Confidence 3456666778889999999999997632 1223334 334442 333333334467899888887777
Q ss_pred HHcC----CCCCcEEEEeC---------------CHhhHHHHHHcCCeEE
Q 023109 159 KRLN----MEPSSSLVIED---------------SVIGVVAGKAAGMEVV 189 (287)
Q Consensus 159 ~~l~----~~~~~~l~iGD---------------s~~Dv~~a~~aG~~~i 189 (287)
+..+ +.-..+.|+|| |..|+..|.++|+...
T Consensus 181 ~~~nd~~~Isek~s~fvgdaagr~~~~~~~kkd~S~~D~~FAaN~gvkF~ 230 (422)
T KOG2134|consen 181 RLENDSVEISEKASIFVGDAAGRPLDALRRKKDHSSADRKFAANAGVKFK 230 (422)
T ss_pred HHhhccceeeechhhhhhhhccCccccccCcccccHHHHHHHHhcCCccC
Confidence 6654 33335556665 3357888888886543
|
|
| >PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.042 Score=45.06 Aligned_cols=95 Identities=21% Similarity=0.256 Sum_probs=52.3
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc----CCc----CCCCCCHHHHH---H
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DEV----RTGKPSPDIFL---E 156 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~----~~~----~~~kp~~~~~~---~ 156 (287)
..+.+++|+.++++.|+++++|+.|+|++-...++..+ ++.+....=-.|++. |+. +...|--..|. .
T Consensus 87 s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL-~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~lIH~~NKn~~ 165 (246)
T PF05822_consen 87 SDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVL-RQAGVFHPNVKVVSNFMDFDEDGVLVGFKGPLIHTFNKNES 165 (246)
T ss_dssp S---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHH-HHTT--BTTEEEEEE-EEE-TTSBEEEE-SS---TT-HHHH
T ss_pred cchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHH-HHcCCCCCCeEEEeeeEEECCcceEeecCCCceEEeeCCcc
Confidence 36889999999999999999999999999999999999 444532110011110 110 00011001111 1
Q ss_pred HH------HHcCCCCCcEEEEeCCHhhHHHHHHc
Q 023109 157 AA------KRLNMEPSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 157 ~~------~~l~~~~~~~l~iGDs~~Dv~~a~~a 184 (287)
++ +.+ -...+++..|||..|+.|+...
T Consensus 166 ~l~~~~~~~~~-~~R~NvlLlGDslgD~~Ma~G~ 198 (246)
T PF05822_consen 166 ALEDSPYFKQL-KKRTNVLLLGDSLGDLHMADGV 198 (246)
T ss_dssp HHTTHHHHHCT-TT--EEEEEESSSGGGGTTTT-
T ss_pred cccCchHHHHh-ccCCcEEEecCccCChHhhcCC
Confidence 11 111 1345899999999999998877
|
The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.70 E-value=0.063 Score=47.23 Aligned_cols=65 Identities=11% Similarity=-0.012 Sum_probs=43.7
Q ss_pred CCHHHHHHHHHHcCCCCC-c--EEEEeCCHhhHHHHHH-----cCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 149 PSPDIFLEAAKRLNMEPS-S--SLVIEDSVIGVVAGKA-----AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~-~--~l~iGDs~~Dv~~a~~-----aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
.|+..++.+++.+++... . .+||||..+|..|.+. .|+.+.+.+.. ....|.+.+++..++...+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~-----~~t~A~y~L~dp~eV~~~L 373 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVP-----KESNAFYSLRDPSEVMEFL 373 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCC-----CCccceEEcCCHHHHHHHH
Confidence 345666777777777665 3 3899999999999986 36554444321 1345678888888876554
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.075 Score=46.21 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=26.7
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l 125 (287)
.+.++..+.|+.|.+ +.+++|+|+.+...+...+
T Consensus 120 ~~~~~~~~aL~~La~-~~~vaIvSGR~~~~l~~~~ 153 (354)
T PLN02151 120 FMSKKMRNTVRKLAK-CFPTAIVSGRCREKVSSFV 153 (354)
T ss_pred cCCHHHHHHHHHHhc-CCCEEEEECCCHHHHHHHc
Confidence 455677788888884 4789999999988887665
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.33 E-value=0.32 Score=48.60 Aligned_cols=55 Identities=18% Similarity=0.219 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHHhhhc-------cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 023109 71 AKHEFVNEVYSMFSDHLC-------KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l 125 (287)
+.++..++..+....... +-++.+|+.+.++.|+++|++++++|+-..+.+-.+.
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg 685 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIG 685 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHH
Confidence 456666666666555432 4578999999999999999999999987777665544
|
|
| >KOG3128 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=94.07 E-value=0.14 Score=41.86 Aligned_cols=95 Identities=15% Similarity=0.197 Sum_probs=62.1
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc----CCcCC------------CCCCHH
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DEVRT------------GKPSPD 152 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~----~~~~~------------~kp~~~ 152 (287)
.+.+++|..++++.|+++++|+.++|++-...++.++.+..++.. +-.+++. ++.+. .|.. .
T Consensus 136 ~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~p-n~k~vSN~~~F~edg~l~gF~~~Lihtfnkn~-~ 213 (298)
T KOG3128|consen 136 NIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHP-NVKFVSNYMDFDEDGNLCGFSQPLIHTFNKNS-S 213 (298)
T ss_pred hHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCc-cHHhhhhhhhhcccchhhhhhHHHHHHHccch-H
Confidence 456778999999999999999999999998888888866655433 2222221 11111 1111 1
Q ss_pred HHHHHHHHcC--CCCCcEEEEeCCHhhHHHHHHcC
Q 023109 153 IFLEAAKRLN--MEPSSSLVIEDSVIGVVAGKAAG 185 (287)
Q Consensus 153 ~~~~~~~~l~--~~~~~~l~iGDs~~Dv~~a~~aG 185 (287)
..+...+.+. ....+++..|||.-|+.|+..+-
T Consensus 214 v~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~ 248 (298)
T KOG3128|consen 214 VLQNESEYFHQLAGRVNVILLGDSIGDLHMADGVP 248 (298)
T ss_pred HHHhhhHHHhhccCCceEEEeccccccchhhcCCc
Confidence 2222233333 34568999999999999987653
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.05 E-value=0.14 Score=44.80 Aligned_cols=13 Identities=46% Similarity=0.621 Sum_probs=11.2
Q ss_pred ccEEEEecCCccc
Q 023109 9 MSCVILDLDGTLL 21 (287)
Q Consensus 9 ~k~iifDlDGTL~ 21 (287)
-.+|++|+||||+
T Consensus 111 ~~llflD~DGTL~ 123 (366)
T PLN03017 111 QIVMFLDYDGTLS 123 (366)
T ss_pred CeEEEEecCCcCc
Confidence 3578999999998
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.38 Score=39.96 Aligned_cols=49 Identities=27% Similarity=0.375 Sum_probs=36.2
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHH---HHHHHhhcCCccccceeecc
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATI---ESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~---~~~l~~~~gl~~~fd~i~~~ 141 (287)
+.|++.+++++++++|.+++++||++.... ...+ ...|+.-.-+.++++
T Consensus 18 ~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l-~~~G~~~~~~~i~ts 69 (248)
T PRK10444 18 AVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF-ATAGVDVPDSVFYTS 69 (248)
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCHhhEecH
Confidence 578999999999999999999999976443 3445 556765444555544
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=93.66 E-value=0.079 Score=43.97 Aligned_cols=47 Identities=6% Similarity=-0.167 Sum_probs=37.9
Q ss_pred CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCeEEEECC
Q 023109 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGD----s~~Dv~~a~~aG~~~i~v~~ 193 (287)
-...+-.|..+++.+++. ++++++||| +.||++|.+.++...+.+.+
T Consensus 182 I~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n 232 (247)
T PTZ00174 182 VFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN 232 (247)
T ss_pred eeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence 345566677888888887 689999999 88999999988877677664
|
|
| >KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.63 E-value=0.39 Score=36.08 Aligned_cols=96 Identities=17% Similarity=0.103 Sum_probs=55.2
Q ss_pred CCCcHHHHHHHHHHC-C-CCEEEEeCCChH-------HHHHHHHhhcCCccccceeeccCCcCCCCCC--HHHHHHHHHH
Q 023109 92 ALPGANRLIKHLSCH-G-VPMALASNSHRA-------TIESKISYQHGWNESFSVIVGSDEVRTGKPS--PDIFLEAAKR 160 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~-g-~~v~l~T~~~~~-------~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~--~~~~~~~~~~ 160 (287)
.-|....-++++++. | ..++++||+-.. ...+.++...|+. .+- ....||. .+.+.+.-..
T Consensus 62 Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIp----VlR----Hs~kKP~ct~E~~~y~~~N 133 (190)
T KOG2961|consen 62 IWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIP----VLR----HSVKKPACTAEEVEYHFGN 133 (190)
T ss_pred cCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCc----eEe----ecccCCCccHHHHHHHhCC
Confidence 344555556666653 3 678888876321 1112222333431 111 1123332 2333332222
Q ss_pred cC-CCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCC
Q 023109 161 LN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 161 l~-~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~ 195 (287)
-. ..++++++|||.+ .|+-+|..+|-..++...+.
T Consensus 134 shv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv 170 (190)
T KOG2961|consen 134 SHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGV 170 (190)
T ss_pred cccCChhHeEEEccchhhhHhhhhhccceeEEecccc
Confidence 22 5678999999999 89999999999999987754
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=93.47 E-value=0.55 Score=38.66 Aligned_cols=86 Identities=21% Similarity=0.232 Sum_probs=55.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~---~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.++|++.+.++.++++|+++.++||++ .......+.+++|+.-..+.++.+.. .....++... +...
T Consensus 14 ~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~---------~~~~~l~~~~-~~~~ 83 (236)
T TIGR01460 14 KPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGS---------VTKDLLRQRF-EGEK 83 (236)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHH---------HHHHHHHHhC-CCCE
Confidence 457899999999999999999999774 34444556354777655666665432 2233333222 3346
Q ss_pred EEEEeCCHhhHHHHHHcCCe
Q 023109 168 SLVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~ 187 (287)
++.+|. ....+.++..|+.
T Consensus 84 v~v~G~-~~~~~~l~~~g~~ 102 (236)
T TIGR01460 84 VYVIGV-GELRESLEGLGFR 102 (236)
T ss_pred EEEECC-HHHHHHHHHcCCc
Confidence 777885 3455666777754
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.43 E-value=0.11 Score=41.59 Aligned_cols=34 Identities=26% Similarity=0.292 Sum_probs=23.8
Q ss_pred HHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 98 RLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 98 ~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
+.+.++++.|++|+++|..++......- +.+|+.
T Consensus 30 pv~~el~d~G~~Vi~~SSKT~aE~~~l~-~~l~v~ 63 (274)
T COG3769 30 PVLLELKDAGVPVILCSSKTRAEMLYLQ-KSLGVQ 63 (274)
T ss_pred hHHHHHHHcCCeEEEeccchHHHHHHHH-HhcCCC
Confidence 4666788888888888887776655444 566654
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.32 E-value=0.19 Score=41.80 Aligned_cols=49 Identities=10% Similarity=0.308 Sum_probs=38.9
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCC---ChHHHHHHHHhhcCCccccceeecc
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNS---HRATIESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~---~~~~~~~~l~~~~gl~~~fd~i~~~ 141 (287)
+.|++.+++++++++|++++++||+ +.......+ +..|+....+.++++
T Consensus 18 ~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l-~~~g~~~~~~~iit~ 69 (249)
T TIGR01457 18 RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEML-ASFDIPATLETVFTA 69 (249)
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCChhhEeeH
Confidence 3468899999999999999999984 466666777 778887666777765
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.20 E-value=0.079 Score=46.65 Aligned_cols=14 Identities=43% Similarity=0.562 Sum_probs=11.6
Q ss_pred ccEEEEecCCcccc
Q 023109 9 MSCVILDLDGTLLN 22 (287)
Q Consensus 9 ~k~iifDlDGTL~d 22 (287)
-.++++|+||||..
T Consensus 119 ~~~LfLDyDGTLaP 132 (384)
T PLN02580 119 KIALFLDYDGTLSP 132 (384)
T ss_pred CeEEEEecCCccCC
Confidence 35889999999984
|
|
| >COG4850 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.89 Score=38.69 Aligned_cols=85 Identities=20% Similarity=0.298 Sum_probs=53.3
Q ss_pred cCCCCCcHHHHHHHHHHCC-CCEEEEeCCChHHHH---HHHHhhcC----------CccccceeeccCCcCCCCCCHHHH
Q 023109 89 KVKALPGANRLIKHLSCHG-VPMALASNSHRATIE---SKISYQHG----------WNESFSVIVGSDEVRTGKPSPDIF 154 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g-~~v~l~T~~~~~~~~---~~l~~~~g----------l~~~fd~i~~~~~~~~~kp~~~~~ 154 (287)
.-++.||+-.+.+.+.+.| .++..+||++..... +.+ ...+ +...++.++.+....+. ..+
T Consensus 194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi-~~~~~P~GPl~L~~~g~~~~~i~~sga~rK~----~~l 268 (373)
T COG4850 194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFI-TNRNFPYGPLLLRRWGGVLDNIIESGAARKG----QSL 268 (373)
T ss_pred ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHH-hcCCCCCCchhHhhcCCcccccccchhhhcc----cHH
Confidence 3468999999999999987 899999999765543 222 2211 12235666555433322 223
Q ss_pred HHHHHHcCCCCCcEEEEeCCH-hhHHH
Q 023109 155 LEAAKRLNMEPSSSLVIEDSV-IGVVA 180 (287)
Q Consensus 155 ~~~~~~l~~~~~~~l~iGDs~-~Dv~~ 180 (287)
+.+++++ +-..++.||||- .|.+.
T Consensus 269 ~nil~~~--p~~kfvLVGDsGE~DpeI 293 (373)
T COG4850 269 RNILRRY--PDRKFVLVGDSGEHDPEI 293 (373)
T ss_pred HHHHHhC--CCceEEEecCCCCcCHHH
Confidence 3344433 234899999998 57765
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=93.12 E-value=0.15 Score=42.65 Aligned_cols=49 Identities=18% Similarity=0.379 Sum_probs=37.4
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChH---HHHHHHHhhcCCccccceeecc
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRA---TIESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~---~~~~~l~~~~gl~~~fd~i~~~ 141 (287)
+.|++.+++++++++|++++++||++.. .....+ ..+|+.-..+.++++
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l-~~~g~~~~~~~i~ts 73 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERL-QRLGFDISEDEVFTP 73 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH-HHcCCCCCHHHeEcH
Confidence 5789999999999999999999997554 355566 667776444555554
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.16 Score=42.44 Aligned_cols=36 Identities=17% Similarity=0.101 Sum_probs=28.7
Q ss_pred CCCCCcHHHHHHHHHHCC-CCEEEEeCCChHHHHHHH
Q 023109 90 VKALPGANRLIKHLSCHG-VPMALASNSHRATIESKI 125 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g-~~v~l~T~~~~~~~~~~l 125 (287)
..+.+++.++|+.|.++. ..++++|+.+....+..+
T Consensus 39 a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~ 75 (266)
T COG1877 39 AVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLF 75 (266)
T ss_pred cCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhc
Confidence 356778888999998873 248999999999888666
|
|
| >PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3 | Back alignment and domain information |
|---|
Probab=92.88 E-value=1.5 Score=36.22 Aligned_cols=73 Identities=16% Similarity=0.107 Sum_probs=47.3
Q ss_pred CCCEEEEeCCChHHHHHHHH--hhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc
Q 023109 107 GVPMALASNSHRATIESKIS--YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184 (287)
Q Consensus 107 g~~v~l~T~~~~~~~~~~l~--~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~a 184 (287)
-++++|+|+.+...-++.+. ...|+ .+|..+.-. +-+| ..+++.++ |+ ++|+|....+..|. .
T Consensus 186 piRtalVTAR~apah~RvI~TLr~Wgv--~vDEafFLg----G~~K----~~vL~~~~--ph--IFFDDQ~~H~~~a~-~ 250 (264)
T PF06189_consen 186 PIRTALVTARSAPAHERVIRTLRSWGV--RVDEAFFLG----GLPK----GPVLKAFR--PH--IFFDDQDGHLESAS-K 250 (264)
T ss_pred ceEEEEEEcCCCchhHHHHHHHHHcCC--cHhHHHHhC----CCch----hHHHHhhC--CC--EeecCchhhhhHhh-c
Confidence 47899999886655455552 33344 355544322 2233 34555554 32 99999999999998 8
Q ss_pred CCeEEEECCC
Q 023109 185 GMEVVAVPSL 194 (287)
Q Consensus 185 G~~~i~v~~~ 194 (287)
+++++.|+.+
T Consensus 251 ~vps~hVP~g 260 (264)
T PF06189_consen 251 VVPSGHVPYG 260 (264)
T ss_pred CCCEEeccCC
Confidence 8888888764
|
1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.91 E-value=0.5 Score=45.20 Aligned_cols=106 Identities=19% Similarity=0.150 Sum_probs=68.8
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccccee--------------eccCC-----cCCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI--------------VGSDE-----VRTGKP 149 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i--------------~~~~~-----~~~~kp 149 (287)
..|+.++.++.++++.+.+++++.+|+-+.-.+-.+. +..|+...-.-+ .+.|+ ....++
T Consensus 673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVa-k~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~ 751 (1160)
T KOG0209|consen 673 SCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVA-KEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKK 751 (1160)
T ss_pred eCCCCccHHHHHHHHhccCceEEEEeCCCccchheeh-heeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCcc
Confidence 3689999999999999999999999998776666555 444442210000 00010 001111
Q ss_pred ---------------------------------------CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEE
Q 023109 150 ---------------------------------------SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 150 ---------------------------------------~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
.|...+.++..+.--.-.++|.||+.||+-+.+.|...++.
T Consensus 752 ~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVAL 831 (1160)
T KOG0209|consen 752 KTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVAL 831 (1160)
T ss_pred chhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceeh
Confidence 11222333333444445799999999999999999999888
Q ss_pred ECCCC
Q 023109 191 VPSLP 195 (287)
Q Consensus 191 v~~~~ 195 (287)
.++..
T Consensus 832 L~~~~ 836 (1160)
T KOG0209|consen 832 LNNPE 836 (1160)
T ss_pred hcCCh
Confidence 88743
|
|
| >COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=91.50 E-value=0.45 Score=35.26 Aligned_cols=85 Identities=13% Similarity=0.182 Sum_probs=53.3
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCC--ChHHHHHHH---HhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNS--HRATIESKI---SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~--~~~~~~~~l---~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
..+...|++.+.+++|.+. +.++++|++ .....+.+. .+.+.+.++-..++|+. |.
T Consensus 65 RnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfCgn-----Kn------------- 125 (180)
T COG4502 65 RNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFCGN-----KN------------- 125 (180)
T ss_pred hhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEecC-----CC-------------
Confidence 4567889999999999987 899999987 333333333 14444444444555532 11
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
+ -..=++|+|++..++..+... +++...+
T Consensus 126 i-vkaDilIDDnp~nLE~F~G~k---IlFdA~H 154 (180)
T COG4502 126 I-VKADILIDDNPLNLENFKGNK---ILFDAHH 154 (180)
T ss_pred e-EEeeEEecCCchhhhhccCce---EEEeccc
Confidence 0 012378999998888877555 4555533
|
|
| >KOG1618 consensus Predicted phosphatase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.64 E-value=1.1 Score=38.16 Aligned_cols=20 Identities=20% Similarity=0.351 Sum_probs=15.7
Q ss_pred EEEEecCCcccccHHHHHHH
Q 023109 11 CVILDLDGTLLNTDGMFSEV 30 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~ 30 (287)
.++||+||+|+.....+..+
T Consensus 37 gfafDIDGVL~RG~~~i~~~ 56 (389)
T KOG1618|consen 37 GFAFDIDGVLFRGHRPIPGA 56 (389)
T ss_pred eEEEecccEEEecCCCCcch
Confidence 79999999999886554433
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=89.59 E-value=0.49 Score=38.89 Aligned_cols=34 Identities=18% Similarity=0.228 Sum_probs=19.0
Q ss_pred CCCCcHHHHHHHHHHCC-CCEEEEeCCChHHHHHH
Q 023109 91 KALPGANRLIKHLSCHG-VPMALASNSHRATIESK 124 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g-~~v~l~T~~~~~~~~~~ 124 (287)
.+.+++.+.|+.|.+.. ..++|+|+.+....+..
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~ 53 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERF 53 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh
Confidence 34556777787777753 36888888887774433
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.48 E-value=8.1 Score=32.75 Aligned_cols=97 Identities=19% Similarity=0.130 Sum_probs=57.1
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH--hhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS--YQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~--~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
.-.+.||+.+.++.|++.|..+.++||++....+..++ .++|+.. +..+ ..-.|.......+-+.. -..+
T Consensus 36 g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~-----v~e~--~i~ssa~~~a~ylk~~~-~~~k 107 (306)
T KOG2882|consen 36 GEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNS-----VKEE--NIFSSAYAIADYLKKRK-PFGK 107 (306)
T ss_pred cCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccc-----cCcc--cccChHHHHHHHHHHhC-cCCC
Confidence 34688999999999999999999999997655443331 4556542 1111 11122222223322322 2335
Q ss_pred cEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
.+..+|-.. =-+.++++|+.....+..
T Consensus 108 ~Vyvig~~g-i~~eL~~aG~~~~g~~~~ 134 (306)
T KOG2882|consen 108 KVYVIGEEG-IREELDEAGFEYFGGGPD 134 (306)
T ss_pred eEEEecchh-hhHHHHHcCceeecCCCC
Confidence 666666443 334577888777766653
|
|
| >KOG0323 consensus TFIIF-interacting CTD phosphatases, including NLI-interacting factor [Transcription] | Back alignment and domain information |
|---|
Probab=89.44 E-value=0.86 Score=42.70 Aligned_cols=78 Identities=18% Similarity=0.107 Sum_probs=55.5
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-ccc-ceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~-~~f-d~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
.+.++|++.+||+++.+. +.+.++|.+++.++..++ +.+.-. .+| |.|++.++.+..|. .......|.
T Consensus 199 ~vKlRP~~~efL~~~skl-femhVyTmg~R~YA~~i~-~liDP~~~lF~dRIisrde~~~~kt--------~dL~~~~p~ 268 (635)
T KOG0323|consen 199 LVKLRPFVHEFLKEANKL-FEMHVYTMGTRDYALEIA-KLIDPEGKYFGDRIISRDESPFFKT--------LDLVLLFPC 268 (635)
T ss_pred EEEeCccHHHHHHHHHhh-ceeEEEeccchHHHHHHH-HHhCCCCccccceEEEecCCCcccc--------cccccCCCC
Confidence 467899999999999987 999999999999998887 554432 234 78888887544332 233334444
Q ss_pred c---EEEEeCCHh
Q 023109 167 S---SLVIEDSVI 176 (287)
Q Consensus 167 ~---~l~iGDs~~ 176 (287)
+ ++.|+|+..
T Consensus 269 g~smvvIIDDr~d 281 (635)
T KOG0323|consen 269 GDSMVVIIDDRSD 281 (635)
T ss_pred CCccEEEEeCccc
Confidence 4 777777653
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=89.44 E-value=0.77 Score=38.65 Aligned_cols=41 Identities=22% Similarity=0.342 Sum_probs=34.8
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF 135 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f 135 (287)
+++.+.++.++++|++++++|+.+...+...+ +.+++..++
T Consensus 24 ~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~-~~l~l~~~~ 64 (273)
T PRK00192 24 EPAKPALKALKEKGIPVIPCTSKTAAEVEVLR-KELGLEDPF 64 (273)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHcCCCCCE
Confidence 45678899999999999999999999998888 888876544
|
|
| >KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=89.04 E-value=1.9 Score=40.18 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=17.2
Q ss_pred cEEEEeCCHhhHHHHHHcCCe
Q 023109 167 SSLVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~ 187 (287)
=...||+..+|+-.=++.|++
T Consensus 652 FYAgFGNR~TDviSY~~VgVP 672 (738)
T KOG2116|consen 652 FYAGFGNRITDVISYRQVGVP 672 (738)
T ss_pred eeeecCCCcccceeeeeecCC
Confidence 355679999999999999875
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=87.70 E-value=0.92 Score=44.37 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=29.5
Q ss_pred CCCCcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHH
Q 023109 91 KALPGANRLIKHLSCH-GVPMALASNSHRATIESKI 125 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l 125 (287)
.+.|++.+.|+.|.+. +-.++|+|+.+...+++.+
T Consensus 532 ~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~ 567 (797)
T PLN03063 532 GLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNF 567 (797)
T ss_pred CCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHh
Confidence 4567888999999875 5689999999999998777
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=87.45 E-value=1.3 Score=36.14 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=33.2
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~ 133 (287)
+...+.+++++++|++++++|+.+...+...+ +.+|+..
T Consensus 18 ~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~-~~lg~~~ 56 (225)
T TIGR02461 18 GPAREALEELKDLGFPIVFVSSKTRAEQEYYR-EELGVEP 56 (225)
T ss_pred hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCC
Confidence 35678999999999999999999999888877 7778744
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=87.13 E-value=1.1 Score=44.29 Aligned_cols=39 Identities=13% Similarity=0.288 Sum_probs=31.4
Q ss_pred CCCCCcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhc
Q 023109 90 VKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQH 129 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~ 129 (287)
..+.|++.+.|+.|.+. +..|+|+|+.+...++..+ ...
T Consensus 621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~f-g~~ 660 (934)
T PLN03064 621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENF-GEF 660 (934)
T ss_pred cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHh-CCC
Confidence 35667888999999875 5689999999999988777 443
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=86.29 E-value=1.5 Score=42.19 Aligned_cols=101 Identities=14% Similarity=0.082 Sum_probs=64.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc---------------ccce---------eeccCCcCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE---------------SFSV---------IVGSDEVRT 146 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~---------------~fd~---------i~~~~~~~~ 146 (287)
|+++.+.+.+..+++.|++++.+|+.....+++.. ..-|+.. ..+. |+.+++.
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA-~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL-- 666 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSEL-- 666 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhh-hheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccc--
Confidence 67888999999999999999999999888877766 5545311 0111 1111111
Q ss_pred CCCCHHHHHHHHHHcC--------------------CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 147 GKPSPDIFLEAAKRLN--------------------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~--------------------~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
..-.++-+.++++... ...+-+.+.||+.||-++.+.|.+.+++.-+|
T Consensus 667 ~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaG 734 (1019)
T KOG0203|consen 667 PDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAG 734 (1019)
T ss_pred cccCHHHHHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeecccc
Confidence 1112334444444331 11223445599999999999999888885554
|
|
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=86.23 E-value=4.2 Score=35.16 Aligned_cols=87 Identities=16% Similarity=0.219 Sum_probs=56.1
Q ss_pred CCCCcHHHHHHHHHHC----CCCEEEEeCCC---hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 91 KALPGANRLIKHLSCH----GVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~----g~~v~l~T~~~---~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
++.|++.++++.++.. |+++.++||.. .......+.+.+|+.-..+.++.+. ......++..+
T Consensus 16 ~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~---------~~~~~ll~~~~- 85 (321)
T TIGR01456 16 KPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSH---------SPYKSLVNKYE- 85 (321)
T ss_pred cccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhh---------HHHHHHHHHcC-
Confidence 4578999999999998 99999999986 3332333336677654344444332 12344444432
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEE
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVA 190 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~ 190 (287)
..++++|.+. -...++..|+..+.
T Consensus 86 --~~v~viG~~~-~~~~l~~~G~~~vv 109 (321)
T TIGR01456 86 --KRILAVGTGS-VRGVAEGYGFQNVV 109 (321)
T ss_pred --CceEEEeChH-HHHHHHHcCCcccc
Confidence 2678888764 56777789977654
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=86.20 E-value=1.3 Score=35.73 Aligned_cols=40 Identities=15% Similarity=0.153 Sum_probs=33.4
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
+.+...+.+++++++|++++++|+++...+...+ +.+++.
T Consensus 19 i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~-~~l~~~ 58 (215)
T TIGR01487 19 ISERAIEAIRKAEKKGIPVSLVTGNTVPFARALA-VLIGTS 58 (215)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHH-HHhCCC
Confidence 3456678899999999999999999999888877 777764
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=85.98 E-value=1.6 Score=35.35 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=31.8
Q ss_pred HHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 96 ANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 96 ~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
..+.|+.++++|++++++|+++...+...+ +.+++.
T Consensus 21 ~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~-~~l~~~ 56 (221)
T TIGR02463 21 AAPWLTRLQEAGIPVILCTSKTAAEVEYLQ-KALGLT 56 (221)
T ss_pred HHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 457888999999999999999999999888 878875
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=85.95 E-value=1.4 Score=35.75 Aligned_cols=40 Identities=18% Similarity=0.116 Sum_probs=33.0
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~ 133 (287)
.|...+.|++++++|++++++|+++...+...+ ..+++..
T Consensus 22 ~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 61 (230)
T PRK01158 22 SLKAVEAIRKAEKLGIPVILATGNVLCFARAAA-KLIGTSG 61 (230)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHhCCCC
Confidence 345667889999999999999999999888777 7777753
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.50 E-value=1.8 Score=36.30 Aligned_cols=40 Identities=8% Similarity=0.090 Sum_probs=33.4
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~ 133 (287)
.+...+.+++++++|++++++|+++...+...+ +.+++..
T Consensus 21 ~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~-~~l~~~~ 60 (272)
T PRK15126 21 GEKTLSTLARLRERDITLTFATGRHVLEMQHIL-GALSLDA 60 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCCC
Confidence 345567899999999999999999999988888 7777753
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=84.42 E-value=2.1 Score=35.51 Aligned_cols=39 Identities=15% Similarity=0.327 Sum_probs=32.7
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
.+...+.+++++++|+.++++|+++...+...+ +.+++.
T Consensus 18 ~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~-~~~~~~ 56 (256)
T TIGR00099 18 SPSTKEALAKLREKGIKVVLATGRPYKEVKNIL-KELGLD 56 (256)
T ss_pred CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHcCCC
Confidence 345667899999999999999999998888777 777764
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >KOG3107 consensus Predicted haloacid dehalogenase-like hydrolase (eyes absent) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.91 E-value=5.2 Score=34.93 Aligned_cols=79 Identities=22% Similarity=0.193 Sum_probs=54.7
Q ss_pred CEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 109 PMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 109 ~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
--+++|+....-.-.++ -.+||...| +.|++... .++...|+++..++|. .-..++|||+...-.+|++..|
T Consensus 372 vnVlvTttqLipalaKv-LL~gLg~~fpiENIYSa~k----iGKescFerI~~RFg~-K~~yvvIgdG~eee~aAK~ln~ 445 (468)
T KOG3107|consen 372 VNVLVTTTQLIPALAKV-LLYGLGSSFPIENIYSATK----IGKESCFERIQSRFGR-KVVYVVIGDGVEEEQAAKALNM 445 (468)
T ss_pred eEEEEeccchhHHHHHH-HHHhcCCcccchhhhhhhh----ccHHHHHHHHHHHhCC-ceEEEEecCcHHHHHHHHhhCC
Confidence 34566666433322233 224555444 55665433 3356899999999997 4578999999999999999999
Q ss_pred eEEEECC
Q 023109 187 EVVAVPS 193 (287)
Q Consensus 187 ~~i~v~~ 193 (287)
++.-++.
T Consensus 446 PfwrI~~ 452 (468)
T KOG3107|consen 446 PFWRISS 452 (468)
T ss_pred ceEeecc
Confidence 9988877
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=83.51 E-value=0.64 Score=38.45 Aligned_cols=15 Identities=33% Similarity=0.505 Sum_probs=12.8
Q ss_pred ccEEEEecCCccccc
Q 023109 9 MSCVILDLDGTLLNT 23 (287)
Q Consensus 9 ~k~iifDlDGTL~d~ 23 (287)
.++++||+||||++.
T Consensus 3 ~~~l~lD~DGTL~~~ 17 (244)
T TIGR00685 3 KRAFFFDYDGTLSEI 17 (244)
T ss_pred cEEEEEecCccccCC
Confidence 468999999999863
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=82.83 E-value=2.3 Score=34.35 Aligned_cols=38 Identities=16% Similarity=0.163 Sum_probs=31.3
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
+...+.+++++++|++++++|+++...+...+ +.+++.
T Consensus 18 ~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~-~~l~~~ 55 (225)
T TIGR01482 18 ESALEAIRKAESVGIPVVLVTGNSVQFARALA-KLIGTP 55 (225)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHhCCC
Confidence 34556888999999999999999999888777 777753
|
catalyze the same reaction as SPP. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.82 E-value=2.5 Score=35.32 Aligned_cols=39 Identities=13% Similarity=0.194 Sum_probs=32.5
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
.|...+.+++++++|+.++++|+++...+...+ +.+++.
T Consensus 22 ~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~-~~l~~~ 60 (272)
T PRK10530 22 LPESLEALARAREAGYKVIIVTGRHHVAIHPFY-QALALD 60 (272)
T ss_pred CHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HhcCCC
Confidence 345567899999999999999999998888877 777765
|
|
| >PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D | Back alignment and domain information |
|---|
Probab=82.02 E-value=15 Score=27.37 Aligned_cols=99 Identities=20% Similarity=0.213 Sum_probs=50.0
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHH-HHHHHH---hhcCCccccc-eeeccCCc-----CCCCCCHHHHHHHHHHcCC
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRAT-IESKIS---YQHGWNESFS-VIVGSDEV-----RTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~-~~~~l~---~~~gl~~~fd-~i~~~~~~-----~~~kp~~~~~~~~~~~l~~ 163 (287)
..+.+.+.+..++|.++.++-++.... +..... ...+...... .+...++. ...-..+...+.+.+...+
T Consensus 22 ~~aa~~i~~~~~~gg~i~~~G~G~S~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (138)
T PF13580_consen 22 EKAADLIAEALRNGGRIFVCGNGHSAAIASHFAADLGGLFGVNRILLPAIALNDDALTAISNDLEYDEGFARQLLALYDI 101 (138)
T ss_dssp HHHHHHHHHHHHTT--EEEEESTHHHHHHHHHHHHHHCHSSSTSSS-SEEETTSTHHHHHHHHTTGGGTHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHCCCEEEEEcCchhhhHHHHHHHHHhcCcCCCcccccccccccchHhhhhcccchhhHHHHHHHHHcCC
Confidence 355667777777888999997774432 332221 2222333332 22222211 0111123444666677778
Q ss_pred CCCcEEEE----eCCHhhHHH---HHHcCCeEEEEC
Q 023109 164 EPSSSLVI----EDSVIGVVA---GKAAGMEVVAVP 192 (287)
Q Consensus 164 ~~~~~l~i----GDs~~Dv~~---a~~aG~~~i~v~ 192 (287)
.|.+++++ |.|++=+.+ |++.|+.++.+.
T Consensus 102 ~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIalT 137 (138)
T PF13580_consen 102 RPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIALT 137 (138)
T ss_dssp -TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEEE
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 88888887 778865544 677799998764
|
... |
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=81.94 E-value=2.8 Score=35.63 Aligned_cols=39 Identities=23% Similarity=0.269 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc
Q 023109 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES 134 (287)
Q Consensus 95 g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~ 134 (287)
.+.+.|++++++|++++++|+.+...+.... +.+++..+
T Consensus 22 ~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~-~~Lgl~~p 60 (302)
T PRK12702 22 AARQALAALERRSIPLVLYSLRTRAQLEHLC-RQLRLEHP 60 (302)
T ss_pred HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHhCCCCe
Confidence 3557899999999999999999999988888 77887643
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=81.53 E-value=3.3 Score=34.40 Aligned_cols=37 Identities=19% Similarity=0.296 Sum_probs=31.8
Q ss_pred cHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 95 g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
...+.++.++++|++++++|+++...+...+ +.+|+.
T Consensus 20 ~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~-~~~~~~ 56 (256)
T TIGR01486 20 PAKEVLERLQELGIPVIPCTSKTAAEVEYLR-KELGLE 56 (256)
T ss_pred HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCC
Confidence 3567889999999999999999999998888 777764
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.85 E-value=2.9 Score=34.84 Aligned_cols=40 Identities=20% Similarity=0.281 Sum_probs=34.2
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~ 133 (287)
.+...+.|++++++|++++++|+++...+...+ +.+++..
T Consensus 22 ~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~-~~l~~~~ 61 (264)
T COG0561 22 SPETKEALARLREKGVKVVLATGRPLPDVLSIL-EELGLDG 61 (264)
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCChHHHHHHH-HHcCCCc
Confidence 345567888999999999999999999999888 8888765
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 287 | ||||
| 3l5k_A | 250 | The Crystal Structure Of Human Haloacid Dehalogenas | 4e-31 | ||
| 3e58_A | 214 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 5e-11 | ||
| 3nas_A | 233 | The Crystal Structure Of Beta-Phosphoglucomutase Fr | 1e-10 | ||
| 3kbb_A | 216 | Crystal Structure Of Putative Beta-Phosphoglucomuta | 5e-10 | ||
| 4ex6_A | 237 | Crystal Structure Of The Alnumycin P Phosphatase Al | 5e-09 | ||
| 1te2_A | 226 | Putative Phosphatase Ynic From Escherichia Coli K12 | 1e-08 | ||
| 4eek_A | 259 | Crystal Structure Of Had Family Hydrolase Dr_1622 F | 4e-08 | ||
| 4gib_A | 250 | 2.27 Angstrom Crystal Structure Of Beta-Phosphogluc | 4e-08 | ||
| 3dv9_A | 247 | Putative Beta-Phosphoglucomutase From Bacteroides V | 7e-08 | ||
| 3fm9_A | 221 | Analysis Of The Structural Determinants Underlying | 2e-07 | ||
| 1lvh_A | 221 | The Structure Of Phosphorylated Beta-phosphoglucomu | 2e-07 | ||
| 1o03_A | 221 | Structure Of Pentavalent Phosphorous Intermediate O | 2e-07 | ||
| 3qub_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 2e-07 | ||
| 3qu5_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-07 | ||
| 3qu4_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-07 | ||
| 3qut_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-07 | ||
| 3quq_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-07 | ||
| 3qyp_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 4e-07 | ||
| 3r9k_A | 243 | Crystal Structure Of Pyrophosphatase From Bacteroid | 5e-07 | ||
| 3d6j_A | 225 | Crystal Structure Of Putative Haloacid Dehalogenase | 6e-07 | ||
| 4g9b_A | 243 | Crystal Structure Of Beta-Phosphoglucomutase Homolo | 1e-06 | ||
| 2fdr_A | 229 | Crystal Structure Of Conserved Haloacid Dehalogenas | 7e-06 | ||
| 3kzx_A | 231 | Crystal Structure Of A Had-Superfamily Hydrolase Fr | 2e-05 | ||
| 2yy6_A | 213 | Crystal Structure Of The Phosphoglycolate Phosphata | 7e-05 | ||
| 2nyv_A | 222 | X-Ray Crystal Structure Of A Phosphoglycolate Phosp | 1e-04 | ||
| 2hdo_A | 209 | Crystal Structure Of Putative Phosphoglycolate Phos | 3e-04 | ||
| 3s6j_A | 233 | The Crystal Structure Of A Hydrolase From Pseudomon | 3e-04 |
| >pdb|3L5K|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like Hydrolase Domain Containing 1a (Hdhd1a) Length = 250 | Back alignment and structure |
|
| >pdb|3E58|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Streptococcus Thermophilus Length = 214 | Back alignment and structure |
|
| >pdb|3NAS|A Chain A, The Crystal Structure Of Beta-Phosphoglucomutase From Bacillus Subtilis Length = 233 | Back alignment and structure |
|
| >pdb|3KBB|A Chain A, Crystal Structure Of Putative Beta-Phosphoglucomutase From Thermotoga Maritima Length = 216 | Back alignment and structure |
|
| >pdb|4EX6|A Chain A, Crystal Structure Of The Alnumycin P Phosphatase Alnb Length = 237 | Back alignment and structure |
|
| >pdb|1TE2|A Chain A, Putative Phosphatase Ynic From Escherichia Coli K12 Length = 226 | Back alignment and structure |
|
| >pdb|4EEK|A Chain A, Crystal Structure Of Had Family Hydrolase Dr_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) With Bound Phosphate And Sodium Length = 259 | Back alignment and structure |
|
| >pdb|4GIB|A Chain A, 2.27 Angstrom Crystal Structure Of Beta-Phosphoglucomutase (Pgmb) From Clostridium Difficile Length = 250 | Back alignment and structure |
|
| >pdb|3DV9|A Chain A, Putative Beta-Phosphoglucomutase From Bacteroides Vulgatus Length = 247 | Back alignment and structure |
|
| >pdb|3FM9|A Chain A, Analysis Of The Structural Determinants Underlying Discrimination Between Substrate And Solvent In Beta- Phosphoglucomutase Catalysis Length = 221 | Back alignment and structure |
|
| >pdb|1LVH|A Chain A, The Structure Of Phosphorylated Beta-phosphoglucomutase From Lactoccocus Lactis To 2.3 Angstrom Resolution Length = 221 | Back alignment and structure |
|
| >pdb|1O03|A Chain A, Structure Of Pentavalent Phosphorous Intermediate Of An Enzyme Catalyzed Phosphoryl Transfer Reaction Observed On Cocrystallization With Glucose 6-Phosphate Length = 221 | Back alignment and structure |
|
| >pdb|3QUB|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47ala Mutant Complexed With Sulfate Length = 243 | Back alignment and structure |
|
| >pdb|3QU5|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp11asn Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QU4|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13ala Mutant Length = 243 | Back alignment and structure |
|
| >pdb|3QUT|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Asp13asn Mutant, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QUQ|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, An Open Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3QYP|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asn Mutant Complexed With Calcium And Phosphate Length = 243 | Back alignment and structure |
|
| >pdb|3R9K|A Chain A, Crystal Structure Of Pyrophosphatase From Bacteroides Thetaiotaomicron, Glu47asp Mutant Complexed With Sulfate, A Closed Cap Conformation Length = 243 | Back alignment and structure |
|
| >pdb|3D6J|A Chain A, Crystal Structure Of Putative Haloacid Dehalogenase-Like Hydrolase From Bacteroides Fragilis Length = 225 | Back alignment and structure |
|
| >pdb|4G9B|A Chain A, Crystal Structure Of Beta-Phosphoglucomutase Homolog From Escherichia Coli, Target Efi-501172, With Bound Mg, Open Lid Length = 243 | Back alignment and structure |
|
| >pdb|2FDR|A Chain A, Crystal Structure Of Conserved Haloacid Dehalogenase-like Protein Of Unknown Function Atu0790 From Agrobacterium Tumefaciens Str. C58 Length = 229 | Back alignment and structure |
|
| >pdb|3KZX|A Chain A, Crystal Structure Of A Had-Superfamily Hydrolase From Ehrlichia Chaffeensis At 1.9a Resolution Length = 231 | Back alignment and structure |
|
| >pdb|2YY6|A Chain A, Crystal Structure Of The Phosphoglycolate Phosphatase From Aquifex Aeolicus Vf5 Length = 213 | Back alignment and structure |
|
| >pdb|2NYV|A Chain A, X-Ray Crystal Structure Of A Phosphoglycolate Phosphatase From Aquifex Aeolicus Length = 222 | Back alignment and structure |
|
| >pdb|2HDO|A Chain A, Crystal Structure Of Putative Phosphoglycolate Phosphatase (Np_784602.1) From Lactobacillus Plantarum At 1.50 A Resolution Length = 209 | Back alignment and structure |
|
| >pdb|3S6J|A Chain A, The Crystal Structure Of A Hydrolase From Pseudomonas Syringae Length = 233 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} Length = 250 | Back alignment and structure |
|---|
Score = 261 bits (669), Expect = 7e-88
Identities = 91/229 (39%), Positives = 129/229 (56%), Gaps = 5/229 (2%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
MA P + + + +I D+DG LL+T+ ++S V + +Y K++ K ++GK LE A
Sbjct: 23 MAAPPQPV-THLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQ 81
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
II++ LP +K E V E + + +PGA +LI HL HG+P ALA++S A+
Sbjct: 82 IIIDVLQLPMSKEELVEESQTKLKEVFPTAALMPGAEKLIIHLRKHGIPFALATSSRSAS 141
Query: 121 IESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNMEPSSS--LVIEDSVI 176
+ K S + FS IV D EV+ GKP PDIFL AKR + P+ LV ED+
Sbjct: 142 FDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPN 201
Query: 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQ 225
GV A AAGM+VV VP T A V+NSL D +PE +GLP ++
Sbjct: 202 GVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSYE 250
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} Length = 214 | Back alignment and structure |
|---|
Score = 208 bits (531), Expect = 2e-67
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 4/211 (1%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
++ +I D+DG L +T+ + + +FL + G D +G + I+ D
Sbjct: 2 NAMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRD 61
Query: 66 YGLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E + ++ K P +++ + G+ + LAS+S +A I
Sbjct: 62 EYDKWDVSTLQEEYNTYKQNNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFR 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ ++ F +++ +E + KP+P+I+L A K+LN++ S +L+IEDS G+ AG A
Sbjct: 122 ALE-ENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVA 180
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
A +EV A+ + +AA +++SL D+
Sbjct: 181 ADVEVWAIRD-NEFGMDQSAAKGLLDSLTDV 210
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} Length = 247 | Back alignment and structure |
|---|
Score = 203 bits (519), Expect = 2e-65
Identities = 49/229 (21%), Positives = 107/229 (46%), Gaps = 12/229 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
V+ D+DG L ++ +E + ++G E + G+T I+ A
Sbjct: 26 VLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDA 85
Query: 72 KHEFVNEVYSMFSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
E + +Y ++ K + +PGA ++ + G+ + + S + ++ ++++
Sbjct: 86 TEEEIKAIYQAKTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNHN 145
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+++V + +V+ GKP+P+ +L A K+ +P+ +LVIE++ +GV AG AAG+
Sbjct: 146 FPGIFQANLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFT 205
Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEGTLPSE 235
+AV + L A+ + +S+ D + W + ++ L +
Sbjct: 206 IAVNTGPLHDNVLLNEGANLLFHSMPDF-NKNW------ETLQSALKQD 247
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A Length = 243 | Back alignment and structure |
|---|
Score = 194 bits (494), Expect = 1e-61
Identities = 50/218 (22%), Positives = 101/218 (46%), Gaps = 5/218 (2%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
++K + V+ D+DG L N+ SE + +G + E + G+T I
Sbjct: 17 GSHMRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINI 76
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDH---LCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ + A E + +Y S + + +PGA L++ + G+ + + S +
Sbjct: 77 VFQRELGKEATQEEIESIYHEKSILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQ 136
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
++ ++ + ++V + +V+ GKP+P+ +L A K+ ++ ++VIE++ +GV
Sbjct: 137 LSLLERLEHNFPGMFHKELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGV 196
Query: 179 VAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
AG AG+ +AV + L Q AD + S+ L
Sbjct: 197 EAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTL 234
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 Length = 226 | Back alignment and structure |
|---|
Score = 190 bits (486), Expect = 1e-60
Identities = 47/211 (22%), Positives = 95/211 (45%), Gaps = 5/211 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKTPLEEAAIIVEDYGLP- 69
I D+DG L++++ ++ + G + R + +G +
Sbjct: 12 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 71
Query: 70 CAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
++ E V V + + + LPG + G+ + LAS S +E ++
Sbjct: 72 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLT-M 130
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+SF + ++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M
Sbjct: 131 FDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRS 190
Query: 189 VAVPSLPKQTH-RYTAADEVINSLLDLRPEK 218
+ VP+ Q R+ A+ ++SL +L +
Sbjct: 191 IVVPAPEAQNDPRFVLANVKLSSLTELTAKD 221
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A Length = 259 | Back alignment and structure |
|---|
Score = 191 bits (486), Expect = 3e-60
Identities = 63/225 (28%), Positives = 102/225 (45%), Gaps = 13/225 (5%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYG 67
V+ DLDG L+ ++G+ ++V ++ L + G D E G+ A + + +
Sbjct: 28 FDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHD 87
Query: 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
+F++ + + F+ + V A+ GA ++ L GVP A+ SNS R + K+
Sbjct: 88 FVPP-PDFLDVLETRFNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLR- 145
Query: 128 QHGWNESFS--VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
G E + S GKP PD++ AA++L + P +VIEDSV G AG AAG
Sbjct: 146 VAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAG 205
Query: 186 MEVVAV--PSLPKQTH----RYTAADEVINSLLDLRP--EKWGLP 222
+ + P P A V+ S +LR + GL
Sbjct: 206 ATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALAEAGLL 250
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A Length = 221 | Back alignment and structure |
|---|
Score = 178 bits (453), Expect = 1e-55
Identities = 49/214 (22%), Positives = 81/214 (37%), Gaps = 14/214 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG + +T K + G R+ ++ G + + I++
Sbjct: 5 VLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKV 64
Query: 71 AKHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
+ EF N+ Y + PG +L+K L + + +ALAS S +
Sbjct: 65 SAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKNGPFLLE 124
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ F I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K +
Sbjct: 125 ---RMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDS 181
Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
G + V ++ E
Sbjct: 182 GALPIGVGR----PEDLGDDIVIVPDTSHYTLEF 211
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} Length = 233 | Back alignment and structure |
|---|
Score = 176 bits (449), Expect = 7e-55
Identities = 64/215 (29%), Positives = 87/215 (40%), Gaps = 15/215 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
VI DLDG + +T K + +D ++ G + E I+ G
Sbjct: 5 VIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETK 64
Query: 72 -----KHEFV---NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
K E + N Y M L LPG RL+ L + + LAS+S A
Sbjct: 65 YTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAP--- 121
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
KI + + F IV + GKP PDIFL AA L++ P+ IED+ G+ A K+
Sbjct: 122 KILRRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKS 181
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
AGM V V AD V+ DL E
Sbjct: 182 AGMFAVGVGQ----GQPMLGADLVVRQTSDLTLEL 212
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 Length = 229 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 6e-53
Identities = 52/226 (23%), Positives = 91/226 (40%), Gaps = 20/226 (8%)
Query: 9 MS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVE 64
MS +I D DG L++++ + ++V L + G E + G T +
Sbjct: 1 MSGFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVES 60
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ +P +++ + L + VK + G + L P + SNS ++
Sbjct: 61 EASIP-LSASLLDKSEKLLDMRLERDVKIIDGVKFALSRL---TTPRCICSNSSSHRLDM 116
Query: 124 KISYQHGWNESFSVIVGSDE---VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
++ + G F+ + S + KP PDIFL A + + P +V+EDSV G+
Sbjct: 117 MLT-KVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHG 175
Query: 181 GKAAGMEVVAVPSLP------KQTHRYTAADEVINSLLDLRPEKWG 220
+AAGM V+ A+ VI+ + DL P
Sbjct: 176 ARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDL-PAVIA 220
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} Length = 233 | Back alignment and structure |
|---|
Score = 171 bits (436), Expect = 7e-53
Identities = 48/213 (22%), Positives = 78/213 (36%), Gaps = 12/213 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
I DLDGTL ++ K L H+ +G + + + G+
Sbjct: 9 FIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSIT 68
Query: 72 KHEFV------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
+ + Y + ALPGA L++ L + +A++ T +
Sbjct: 69 DEQAERLSEKHAQAYERLQHQ---IIALPGAVELLETLDKENLKWCIATSGGIDTATINL 125
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
+ + IV D+V GKP PD+FL AAK++ LVI D++ ++A +
Sbjct: 126 K-ALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCK 184
Query: 186 MEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
V + S A V LDL
Sbjct: 185 ATGVGLLSGGYDIGELERAGALRVYEDPLDLLN 217
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} Length = 275 | Back alignment and structure |
|---|
Score = 170 bits (433), Expect = 6e-52
Identities = 42/227 (18%), Positives = 89/227 (39%), Gaps = 14/227 (6%)
Query: 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI 61
+PL ++ + D+DGT++ + + + F H G + A
Sbjct: 28 TKPLSLKINAALFDVDGTIIISQPAIAAFWRDFGKDKPYFDAEHVIHISHGWRTYDAIAK 87
Query: 62 IVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHG-VPMALASNSHRAT 120
D+ ++ E+ + +H +PGA +L L+ A+A++ R
Sbjct: 88 FAPDFADEEYVNKLEGEIPEKYGEH---SIEVPGAVKLCNALNALPKEKWAVATSGTRDM 144
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-------MEPSSSLVIED 173
+ + + +++V+ GKP P+ +L+ L S +V ED
Sbjct: 145 AKKWF--DILKIKRPEYFITANDVKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFED 202
Query: 174 SVIGVVAGKAAGMEVVAVPS-LPKQTHRYTAADEVINSLLDLRPEKW 219
+ G+ AGKAAG ++V + + + D ++ + +R ++
Sbjct: 203 APAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVGEY 249
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} Length = 243 | Back alignment and structure |
|---|
Score = 169 bits (430), Expect = 7e-52
Identities = 52/226 (23%), Positives = 85/226 (37%), Gaps = 21/226 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M L+ VI DLDG + +T + + + + G D + + G + E
Sbjct: 1 MVMKLQ----GVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLR 56
Query: 61 IIVEDYGLP--------CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
I++ G N +Y L LPG L+ L + + L
Sbjct: 57 RILQHGGKEGDFNSQERAQLAYRKNLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGL 116
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
AS S A E F+ + +++ KP P+IFL A L + P + + IE
Sbjct: 117 ASVSLNAPTILA---ALELREFFTFCADASQLKNSKPDPEIFLAACAGLGVPPQACIGIE 173
Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
D+ G+ A A+GM V + + T A ++ S L +
Sbjct: 174 DAQAGIDAINASGMRSVGIGA------GLTGAQLLLPSTESLTWPR 213
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} Length = 277 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 3e-36
Identities = 34/201 (16%), Positives = 75/201 (37%), Gaps = 16/201 (7%)
Query: 9 MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
+ +ILD GT ++ + + G E E + +G E ++ +
Sbjct: 14 VEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSR 73
Query: 68 LP---------CAKHEFVNEVYSMFSDHLCK-----VKALPGANRLIKHLSCHGVPMALA 113
+ + E + +Y +F+ + + +PG + L G+ +
Sbjct: 74 IANAWLSIKGQASNEEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGN 133
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIE 172
+ + + + + V + +V G+P PD+ L+ A L + + + ++
Sbjct: 134 TGYGPGMMAPALIAAKEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVD 193
Query: 173 DSVIGVVAGKAAGMEVVAVPS 193
D++ G+ G AGM V V
Sbjct: 194 DTLPGIEEGLRAGMWTVGVSC 214
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A Length = 267 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 1e-31
Identities = 41/248 (16%), Positives = 77/248 (31%), Gaps = 43/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFS-EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL- 68
VI GT ++ EV K G E K +G ++ + E +
Sbjct: 8 AVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIA 67
Query: 69 --------PCAKHEFVNEVYSMFSDHL-----CKVKALPGANRLIKHLSCHGVPMALASN 115
+ E+Y F + L + G +I L G+ + +
Sbjct: 68 SEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTG 127
Query: 116 SHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIED 173
R ++ + +V D+V G+P P + + A L + P + + + D
Sbjct: 128 YTREMMDIVAK-EAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGD 186
Query: 174 SVIGVVAGKAAGMEVVAVPS-------LPKQTHRYTA------------------ADEVI 208
+V + G+ AGM V V ++ + A I
Sbjct: 187 TVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTI 246
Query: 209 NSLLDLRP 216
++ +L
Sbjct: 247 ETMQELES 254
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} Length = 231 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-31
Identities = 45/208 (21%), Positives = 81/208 (38%), Gaps = 12/208 (5%)
Query: 12 VILDLDGTLLNT-DGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
VI D TL++T + L + G + + + + + + I +
Sbjct: 28 VIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDS---IPNSTIPKYLITLLGKRWKE 84
Query: 71 AKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
A + N + S SD+ GA L+ L + + MA+ SN + + +
Sbjct: 85 ATILYENSLEKSQKSDN---FMLNDGAIELLDTLKENNITMAIVSNKNGERLR-SEIHHK 140
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEV 188
F I+GS + T KPSP+ L A +N+EPS I DS+ + + AG
Sbjct: 141 NLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLP 200
Query: 189 VAVP--SLPKQTHRYTAADEVINSLLDL 214
+ ++ K + ++ N + L
Sbjct: 201 IKYGSTNIIKDILSFKNFYDIRNFICQL 228
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 Length = 190 | Back alignment and structure |
|---|
Score = 114 bits (288), Expect = 2e-31
Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 14/189 (7%)
Query: 7 KLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
K M I DL GTLL+ + L YG D ++ + + +E
Sbjct: 2 KGMKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVS----TPFAIE 57
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ E E Y G + L++ +S G L S+ + +E
Sbjct: 58 TFA---PNLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE- 113
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
I + F+ +V S KP+P+ L ++ + LVI D I + AG+A
Sbjct: 114 -ILEKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISS--GLVIGDRPIDIEAGQA 170
Query: 184 AGMEVVAVP 192
AG++
Sbjct: 171 AGLDTHLFT 179
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207 | Back alignment and structure |
|---|
Score = 113 bits (286), Expect = 6e-31
Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 15/208 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA-AIIVEDYGLPC 70
I DLDGTLL++ ++ ++ +D + + + K +++ + ED L
Sbjct: 7 FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL-- 64
Query: 71 AKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISYQ 128
E +N+V + +V +PGA ++ G+ + ++ + A I
Sbjct: 65 -DVEVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAF---TILKD 120
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
G F+ I+ S KPSP+ + + ++ I D + V + +G++
Sbjct: 121 LGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQS 180
Query: 189 VAVPSLPKQTHRYTAADEVINSLLDLRP 216
+ + I +L D+
Sbjct: 181 INF------LESTYEGNHRIQALADISR 202
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} Length = 225 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 2e-30
Identities = 48/224 (21%), Positives = 82/224 (36%), Gaps = 19/224 (8%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLP 69
+ D D TL ++ ++ L ++G + + +GK LEE+ I+
Sbjct: 8 VYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGK-TLEESFSIL----TG 62
Query: 70 CAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIES 123
+ + +S P + HL G+ + + S +
Sbjct: 63 ITDADQLESFRQEYSKEADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRIL-- 120
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
H ++ F +I+G ++V KP P+ L A RL P L I DS + A
Sbjct: 121 SFLRNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAA 180
Query: 184 AGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP---EKWGLP 222
AG+ V S Q + D +I++L L +K G P
Sbjct: 181 AGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPEDKSGCP 224
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 Length = 209 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-30
Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLP 69
++ D+DGTL N+ ++ V++ L YGK + + K + E G+
Sbjct: 6 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA----EQAMTE-LGIA 60
Query: 70 CAKHEFVNEVY-SMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN-SHRATIESKISY 127
++ + Y + + H +++ PG L + L + + + ++
Sbjct: 61 ASEFDHFQAQYEDVMASHYDQIELYPGITSLFEQLP-SELRLGIVTSQRRNELE--SGMR 117
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME 187
+ + +V + +D+ KP P L A +++N+ P ++L I DSV +AA ++
Sbjct: 118 SYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177
Query: 188 VVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
P H+ LD+
Sbjct: 178 FGLAVWGMDPNADHQ--KVAHRFQKPLDILE 206
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 Length = 234 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 2e-28
Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 17/224 (7%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
+ L V+ D+DGTLL + M VL L++ H GK ++ +
Sbjct: 4 RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 60
Query: 66 YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHG-VPMALASNSH 117
GL A+ + ++ + + L G L+ LS V + L + +
Sbjct: 61 VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 120
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL---NMEPSSSLVIEDS 174
A+ K+ G + F +D+ P I LE A+R+ N PS ++I D+
Sbjct: 121 EASGRHKLK-LPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDT 179
Query: 175 VIGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
+ + +AV + + + + +
Sbjct: 180 EHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDE 223
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} Length = 235 | Back alignment and structure |
|---|
Score = 104 bits (260), Expect = 7e-27
Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 24/226 (10%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG---------------KEWDGREKHKIVGKTP 55
V D+ TLL+ + M E G + R + +
Sbjct: 6 LVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKV 65
Query: 56 LEEA-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
L + + + E V + ++ + L G ++ + G+ A+
Sbjct: 66 LTGSQEALAGKLKVD---VELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIG 122
Query: 115 N---SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
N + + + G E +DEV + KP ++F + ++P SL I
Sbjct: 123 NVMFWPGSYTRLLLE-RFGLMEFIDKTFFADEVLSYKPRKEMFEKVLNSFEVKPEESLHI 181
Query: 172 EDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216
D+ + GM V + + + I S+ +L+
Sbjct: 182 GDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKD 227
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 1e-26
Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 15/192 (7%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
L + V+ DLDGTL ++ ++ +K L K+ + + +K VG PL+ + +E
Sbjct: 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGP-PLKTS--FMEY 58
Query: 66 YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
Y E + D+ + + K G L+ L +G + +A++
Sbjct: 59 YNFD---EETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVF 115
Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
+ +I F IVGS D+ A + LN++ +++I D V+
Sbjct: 116 SK--QILEHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVI 173
Query: 180 AGKAAGMEVVAV 191
+ + V
Sbjct: 174 GALKNNLPSIGV 185
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* Length = 205 | Back alignment and structure |
|---|
Score = 101 bits (255), Expect = 2e-26
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 22/206 (10%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+DGTL F+ + + + + P +E+A A
Sbjct: 9 WVFDMDGTLTIAVHDFAAIREAL----SIPAEDDILTHLAA-LPADESA----------A 53
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
KH ++ E + + PGA L++ L+ G + + + + R + G
Sbjct: 54 KHAWLLEHERDLAQGS---RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLE-AIGL 109
Query: 132 NESFS-VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ F+ V + KP P L+ A+ ++ PS +++ D + G+AAG V
Sbjct: 110 ADCFAEADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVL 169
Query: 191 VPSLPKQTHRYTAADEVINSLLDLRP 216
V D LR
Sbjct: 170 VN--LPDNPWPELTDWHARDCAQLRD 193
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} Length = 241 | Back alignment and structure |
|---|
Score = 102 bits (257), Expect = 2e-26
Identities = 39/220 (17%), Positives = 84/220 (38%), Gaps = 21/220 (9%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GKTPLEEA 59
+ DLD TL++T + K + + + +
Sbjct: 5 IFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFD- 63
Query: 60 AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMALASNSHR 118
++ LP ++++ + + ++ +PGA +++ L G + + ++ +
Sbjct: 64 -YLLRRLDLP-YNPKWISAGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNP 121
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
KI + ++ F ++ SD KP P IF +A K N++P +L++ D +
Sbjct: 122 VKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSD 180
Query: 178 VVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDL 214
+ K GM+ V ++ AD I++L L
Sbjct: 181 IYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESL 220
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} Length = 137 | Back alignment and structure |
|---|
Score = 95.6 bits (238), Expect = 8e-25
Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 8/127 (6%)
Query: 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150
+ L+ +GV + SN + I + N ++ S E+ KP
Sbjct: 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIR-ELETNGVVDKVLLSGELGVEKPE 76
Query: 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210
F AA +++ ++++DS++ V AG+ V + A I
Sbjct: 77 EAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYYQQFDR-------AVVEIVG 129
Query: 211 LLDLRPE 217
L L E
Sbjct: 130 LFGLEGE 136
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200 | Back alignment and structure |
|---|
Score = 97.4 bits (243), Expect = 9e-25
Identities = 36/217 (16%), Positives = 64/217 (29%), Gaps = 34/217 (15%)
Query: 9 MSCVILDLDGTLLNTDG----------MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEE 58
+ + D+ G LL F F ++ E G+ L E
Sbjct: 4 IKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELEL----GRMTLAE 59
Query: 59 A-AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
+V +F + + P L + L M +N
Sbjct: 60 YLEQVVFYQPRDFTPEDFRAVMEEQS-------QPRPEVLALARDLG-QRYRMYSLNNEG 111
Query: 118 RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG 177
R E +I G E S + KP+P ++ + P +++++D +
Sbjct: 112 RDLNEYRIR-TFGLGEFLLAFFTSSALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQN 170
Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
V A +A GM + A ++ L L
Sbjct: 171 VQAARAVGM----------HAVQCVDAAQLREELAAL 197
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} Length = 263 | Back alignment and structure |
|---|
Score = 97.9 bits (244), Expect = 2e-24
Identities = 45/234 (19%), Positives = 77/234 (32%), Gaps = 31/234 (13%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG--------------------KEWDGREKHKI 50
+ D+ TLL E T +G +
Sbjct: 3 LLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHG 62
Query: 51 VGKTPLEEAAI--IVEDYGLPCAK--HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCH 106
+ + G+ A+ ++Y FS C + L GA ++
Sbjct: 63 LTSRQWWLDVVLQTFHLAGVQDAQAVAPIAEQLYKDFSHP-CTWQVLDGAEDTLRECRTR 121
Query: 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
G+ +A+ SN +E + G E F ++ S+ KP P IF EA + +MEP
Sbjct: 122 GLRLAVISNFD-RRLEGILG-GLGLREHFDFVLTSEAAGWPKPDPRIFQEALRLAHMEPV 179
Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVP---SLPKQTHRYTAADEVINSLLDLRP 216
+ + D+ + +A GM V +L + ++ SL L P
Sbjct: 180 VAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLP 233
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A Length = 222 | Back alignment and structure |
|---|
Score = 96.1 bits (240), Expect = 4e-24
Identities = 50/217 (23%), Positives = 85/217 (39%), Gaps = 22/217 (10%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYG 67
+ ++ DLDGTL+++ + L+ L + G E + K +G ++E
Sbjct: 3 LRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGG----VRALLEK-V 57
Query: 68 LPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRATI 121
L +F E +F H + K P ++ L G +A+ SN +
Sbjct: 58 LK---DKFREEYVEVFRKHYLENPVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSK 114
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
KI + F +IVG D KPSP L+ + L EP +L++ D+ + AG
Sbjct: 115 --KILDILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAG 172
Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDLRP 216
K AG + + + D ++ DL
Sbjct: 173 KRAGTKTALALWGYVKLNSQI---PDFTLSRPSDLVK 206
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206 | Back alignment and structure |
|---|
Score = 94.7 bits (236), Expect = 9e-24
Identities = 29/216 (13%), Positives = 67/216 (31%), Gaps = 34/216 (15%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKE-------------WDGREKHKIVGKTPLEE 58
I DL +++ D F+ VL + + E+ +I +
Sbjct: 10 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEI---SDEAF 64
Query: 59 AAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
A + + LP + +F + ++F P ++ L G + + SN++R
Sbjct: 65 AEALCHEMALPLSYEQFSHGWQAVFVA------LRPEVIAIMHKLREQGHRVVVLSNTNR 118
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
++ I S ++ KP I+ + PS ++ +D+ +
Sbjct: 119 LHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNI 178
Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
G+ + + + +
Sbjct: 179 EGANQLGI----------TSILVKDKTTIPDYFAKV 204
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} Length = 220 | Back alignment and structure |
|---|
Score = 95.2 bits (237), Expect = 1e-23
Identities = 35/217 (16%), Positives = 78/217 (35%), Gaps = 24/217 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT------PLEEA----- 59
V++D TL+ +F E + L G + D R+ + K P E+
Sbjct: 5 AVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVD 64
Query: 60 -AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHR 118
+ G+ V E+ ++ L +G +AL SN+
Sbjct: 65 PKDFLYILGIY-PSERLVKELKEADIRDGE-AFLYDDTLEFLEGLKSNGYKLALVSNAS- 121
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG- 177
+++ + + + F + S E++ KP+P IF A ++ ++ + D
Sbjct: 122 PRVKTLLE-KFDLKKYFDALALSYEIKAVKPNPKIFGFALAKVGYP---AVHVGDIYELD 177
Query: 178 VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ K + ++ + + + Y + + +L +
Sbjct: 178 YIGAKRSYVDPILL----DRYDFYPDVRDRVKNLREA 210
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 1e-23
Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 19/198 (9%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
M + + V+ DLDGTL + ++ ++ L +G + D + +G PL +
Sbjct: 25 MKKNYE----IVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGP-PLHDT- 78
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN 115
E Y + E + ++ + + K +++ L +G + +A++
Sbjct: 79 -FKEYYKFE---DKKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATS 134
Query: 116 -SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM-EPSSSLVIED 173
I + F I GS+ T ++ N+ + +++ D
Sbjct: 135 KPTVFAE--TILRYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGD 192
Query: 174 SVIGVVAGKAAGMEVVAV 191
++ K G++ + V
Sbjct: 193 RKYDIIGAKKIGIDSIGV 210
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A Length = 260 | Back alignment and structure |
|---|
Score = 95.3 bits (237), Expect = 2e-23
Identities = 42/235 (17%), Positives = 83/235 (35%), Gaps = 28/235 (11%)
Query: 6 KKLMS--CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------ 51
L V DLD TL++T G + + ++ +E+ +I+
Sbjct: 13 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKEC 72
Query: 52 ---GKTPLEEA-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKH 102
T + + +++ + E Y ++ + + ++
Sbjct: 73 FHPYSTCITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTE 132
Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162
L V + L +N R T KI F IV E + KP+P IF L
Sbjct: 133 LR-KEVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLG 190
Query: 163 MEPSSSLVIEDSVIG-VVAGKAAGME--VVAVPSLPKQTHRYTAADEVINSLLDL 214
++P +++ D++ + G AG++ V S +++S+L+L
Sbjct: 191 VQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 245
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210 | Back alignment and structure |
|---|
Score = 93.0 bits (232), Expect = 4e-23
Identities = 29/192 (15%), Positives = 71/192 (36%), Gaps = 20/192 (10%)
Query: 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVED 65
++ + DLDGTL+++ + G + +G PLE +
Sbjct: 2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGP-PLESS---FAT 57
Query: 66 YGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRA 119
L + ++E ++ + + + + P L++ LS P+ + +
Sbjct: 58 C-LS---KDQISEAVQIYRSYYKAKGIYEAQLFPQIIDLLEELS-SSYPLYITTTKDTST 112
Query: 120 TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179
++ + F I GS D+ +A + + P +++I D+ ++
Sbjct: 113 AQ--DMAKNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQLAPEQAIIIGDTKFDML 168
Query: 180 AGKAAGMEVVAV 191
+ G++ +A+
Sbjct: 169 GARETGIQKLAI 180
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 Length = 243 | Back alignment and structure |
|---|
Score = 93.8 bits (234), Expect = 6e-23
Identities = 36/218 (16%), Positives = 67/218 (30%), Gaps = 14/218 (6%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGK---TPLEEAAIIVEDY 66
+ DLDGTL+N+ + + + L +G + A
Sbjct: 25 LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 84
Query: 67 GLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCHGVPMALASN-SHRAT 120
+ F + + P ++ L G +A+ +N +
Sbjct: 85 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 144
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
I G + FS ++G + KP P F + + P L + DS + A
Sbjct: 145 Q--PILTAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFA 202
Query: 181 GKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
+AG VV + + D + + D+
Sbjct: 203 AHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILK 240
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} Length = 211 | Back alignment and structure |
|---|
Score = 92.5 bits (230), Expect = 8e-23
Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 36/223 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEE-AA 60
++ DL G L++ + E ++ F + + + G+ EE
Sbjct: 8 IVFDLGGVLIHLN--REESIRRFKAIGVADIE-EMLDPYLQKGLFLDLESGRKSEEEFRT 64
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ G + + + + + + L SN++
Sbjct: 65 ELSRYIGKELTYQQVYDALLGFLEE-------ISAEKFDYIDSLRPDYRLFLLSNTNPYV 117
Query: 121 IESKISYQH-----GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
++ +S + + F + S ++ KP+ DIFLE M+P +L I+D
Sbjct: 118 LDLAMSPRFLPSGRTLDSFFDKVYASCQMGKYKPNEDIFLEMIADSGMKPEETLFIDDGP 177
Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218
V + G T+ + I ++ L E+
Sbjct: 178 ANVATAERLGF----------HTYCPDNGENWIPAITRLLREQ 210
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A Length = 238 | Back alignment and structure |
|---|
Score = 92.8 bits (231), Expect = 1e-22
Identities = 40/223 (17%), Positives = 82/223 (36%), Gaps = 24/223 (10%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIV----------GKTPLEE 58
++ D+D T+L+ + L+ D + ++K + GK +E
Sbjct: 9 TLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDE 68
Query: 59 A-----AIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
+ ++++YG + Y F + ++ + GA LI +L + +
Sbjct: 69 VVNTRFSALLKEYGYEADGALL-EQKYRRFLEEGHQL--IDGAFDLISNLQ-QQFDLYIV 124
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL-NMEPSSSLVIE 172
+N T ++ G F I S++ KP + F +R+ +L+I
Sbjct: 125 TNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIG 183
Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
DS+ + G+ AG++ + K I L +L
Sbjct: 184 DSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEEL 226
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} Length = 240 | Back alignment and structure |
|---|
Score = 92.0 bits (229), Expect = 2e-22
Identities = 47/233 (20%), Positives = 81/233 (34%), Gaps = 30/233 (12%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYG----------KEW--DGREK-------HKIV 51
I D+DGT+L+T + L + G K + G ++
Sbjct: 6 AAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAG 65
Query: 52 GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKALPGANRLIKHLSCH 106
A ++ VN V +F + K PG L+K+L
Sbjct: 66 SSRESLVAFGTKDEQIPEAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQK 125
Query: 107 GVPMALASN-SHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165
GV +A+ SN + A + + SF +G KP+PD+ E K L +
Sbjct: 126 GVKLAVVSNKPNEAVQVLV---EELFPGSFDFALGEKSGIRRKPAPDMTSECVKVLGVPR 182
Query: 166 SSSLVIEDSVIGVVAGKAAGMEVVAVP--SLPKQTHRYTAADEVINSLLDLRP 216
+ I DS I + + + M+ +AV + A ++++ L
Sbjct: 183 DKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} Length = 196 | Back alignment and structure |
|---|
Score = 85.8 bits (212), Expect = 2e-20
Identities = 20/104 (19%), Positives = 35/104 (33%), Gaps = 7/104 (6%)
Query: 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149
+ PGA +K L G+P A A + ++ + G P
Sbjct: 35 AQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAAPV------NDWMIAAPRPTAGWP 88
Query: 150 SPDIFLEAAKRLNMEPSSS-LVIEDSVIGVVAGKAAGMEVVAVP 192
PD A LN+ ++I + +G AG+ + +
Sbjct: 89 QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLA 132
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} PDB: 1x42_A Length = 234 | Back alignment and structure |
|---|
Score = 84.3 bits (209), Expect = 1e-19
Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 25/223 (11%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG------------------KEWDGREKHKIVGK 53
V D GTL + +G LK G + +
Sbjct: 5 VFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY--- 61
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKAL-PGANRLIKHLSCHGVPMAL 112
PL + V ++ + + + L P ++K L + +
Sbjct: 62 RPLRDILEEVMRKLAEKYGFKYPENFWEISLRMSQRYGELYPEVVEVLKSLK-GKYHVGM 120
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
++S + + G + F I S+E KP P IF A K+ ++ ++ +
Sbjct: 121 ITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVG 179
Query: 173 DSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D+ + K GM + + ++ + D +++ L ++
Sbjct: 180 DNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} Length = 240 | Back alignment and structure |
|---|
Score = 80.9 bits (200), Expect = 3e-18
Identities = 41/226 (18%), Positives = 71/226 (31%), Gaps = 26/226 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--------------------WDGREKHKI 50
+ DLD T+ + + KY + W + K+
Sbjct: 7 NLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKV 66
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-KVKALPGANRLIKHLSCHGVP 109
K L + F + K +P A ++++L+
Sbjct: 67 -TKEELNRQRFFYPLQAVGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYN 124
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ + SN R K+ G + F I+ S+++ KP P+IF A E SL
Sbjct: 125 LYILSNGFRELQSRKMR-SAGVDRYFKKIILSEDLGVLKPRPEIFHFALSATQSELRESL 183
Query: 170 VIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+I DS + GM + + I+SL +L
Sbjct: 184 MIGDSWEADITGAHGVGMHQAFYNVTERTVFPFQ-PTYHIHSLKEL 228
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A Length = 229 | Back alignment and structure |
|---|
Score = 79.9 bits (197), Expect = 6e-18
Identities = 36/216 (16%), Positives = 68/216 (31%), Gaps = 36/216 (16%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------GKTPLEEA-A 60
+++DL G L+N D ++ F K G + + G E
Sbjct: 31 LLIDLGGVLINLD--RERCIENFK-KIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRD 87
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
I E G + + S D +P + + L SN++
Sbjct: 88 GIREMMGKMVSDKQIDAAWNSFLVD-------IPTYKLDLLLKLREKYVVYLLSNTNDIH 140
Query: 121 IE-----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV 175
+ + + F S E++ KP P+IF + ++P + I+DS
Sbjct: 141 WKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMAKPEPEIFKAVTEDAGIDPKETFFIDDSE 200
Query: 176 IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211
I + G+ T+ A ++ +
Sbjct: 201 INCKVAQELGI----------STYTPKAGEDWSHLF 226
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 Length = 384 | Back alignment and structure |
|---|
Score = 78.7 bits (193), Expect = 9e-17
Identities = 30/245 (12%), Positives = 66/245 (26%), Gaps = 46/245 (18%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEA--------AIIV 63
+ LD + + +++ + + + K T +E +
Sbjct: 133 PLQFLDNVKVGKNNIYAALEEFATTELHVSDATLFSLKGALWTLAQEVYQEWYLGSKLYE 192
Query: 64 EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
+ + + ++ + L+ L G + +A+
Sbjct: 193 DVEK-----KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVV 247
Query: 124 KISYQHGWNESFSV--IVGSDEVRT-----------GKPSPDIFLEAAKRLN-------- 162
G F I + +V GKP+P ++ A N
Sbjct: 248 PFE-NLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALYGNNRDKYESYI 306
Query: 163 ------MEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSL 211
+ ++ DS+ +++ + G + AD VIN L
Sbjct: 307 NKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHL 366
Query: 212 LDLRP 216
+LR
Sbjct: 367 GELRG 371
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} Length = 234 | Back alignment and structure |
|---|
Score = 75.7 bits (186), Expect = 2e-16
Identities = 44/234 (18%), Positives = 83/234 (35%), Gaps = 34/234 (14%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKE--------WDGREKHKIVGKT 54
K+L+ + D D TL + + F EV K + L YG +I+G
Sbjct: 5 KELIKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYG 64
Query: 55 P------LEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHG 107
+ E A+ + + + + + ++ + L ++ LPG +K L G
Sbjct: 65 AKAFTISMVETALQISNGKIA---ADIIRQIVDLGKSLLKMPIELLPGVKETLKTLKETG 121
Query: 108 -VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166
+ +A+ E+K+ + G + F I + + +L L + PS
Sbjct: 122 KYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVMSD-----KTEKEYLRLLSILQIAPS 175
Query: 167 SSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAADEV-----INSLLDL 214
L++ +S + + G V +P H T + L DL
Sbjct: 176 ELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDL 229
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A Length = 232 | Back alignment and structure |
|---|
Score = 73.7 bits (181), Expect = 9e-16
Identities = 33/216 (15%), Positives = 75/216 (34%), Gaps = 17/216 (7%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREK-------HKIVGK-TPLEEAA 60
+ DL GTL + + + F + W R+K ++ + ++A
Sbjct: 7 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALW--RQKQLEYTWLRSLMNRYVNFQQAT 64
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ + S D ++ ++ L G+ +A+ SN +
Sbjct: 65 EDALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQS 124
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
I++ +S+ G + F ++ D V+ KP ++ A + L ++ S+ L + +
Sbjct: 125 IDAVVSH-AGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATG 183
Query: 181 GKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
+ G + + D + SL +
Sbjct: 184 ARYFGFPTCWINRTGNVFEEMGQ-TPDWEVTSLRAV 218
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} Length = 231 | Back alignment and structure |
|---|
Score = 73.3 bits (179), Expect = 1e-15
Identities = 36/215 (16%), Positives = 78/215 (36%), Gaps = 20/215 (9%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR---EKHKIVGKTPLEEAAIIVEDYG 67
+ D D TLL+ D + +++ + ++G + R + + + ++ Y
Sbjct: 13 VFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYR 72
Query: 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127
L + + + S D+ + PGA ++HL G P + S+ KI+
Sbjct: 73 LEQPRDTRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIA- 130
Query: 128 QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA-GM 186
+ G + + ++ L+ ++++D + + A K A G
Sbjct: 131 RSGLWDEV------EGRVLIYIHKELMLDQVMEC-YPARHYVMVDDKLRILAAMKKAWGA 183
Query: 187 EVVAV-------PSLPKQTHRYTAADEVINSLLDL 214
+ V PK+ + AD + + DL
Sbjct: 184 RLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDL 218
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* Length = 240 | Back alignment and structure |
|---|
Score = 72.2 bits (177), Expect = 4e-15
Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 15/215 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKH-------KIVGK-TPLEEAA 60
+ D GTLL+ W R++ ++ + +
Sbjct: 17 CVFDAYGTLLDVHSAVMRNADEVGASAEALSMLW--RQRQLEYSWTRTLMHQYADFWQLT 74
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ L E + ++ A P A ++ L G +A+ SN +
Sbjct: 75 DEALTFALRTYHLEDRKGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEM 134
Query: 121 IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180
+++ + + + +D+++ KP P I+ A RL + P+ + + +
Sbjct: 135 LQAALKA-SKLDRVLDSCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGG 193
Query: 181 GKAAGMEVVAVP-SLPKQTHRYTAADEVINSLLDL 214
G V + + + +NSL +L
Sbjct: 194 AGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSEL 228
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* Length = 282 | Back alignment and structure |
|---|
Score = 71.0 bits (173), Expect = 2e-14
Identities = 30/230 (13%), Positives = 61/230 (26%), Gaps = 18/230 (7%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTD-GMFSEV---LKTFLV-KYGKEWDG-REKHKIVGKT 54
A P + D+D L + + + + F + + K
Sbjct: 49 SATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKE 108
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL-- 112
+V + N + +K ++ L G L
Sbjct: 109 YGLAIRGLVMFHK---VNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWL 165
Query: 113 ---ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS- 168
A +H + ++ + KP F +A K + +
Sbjct: 166 FTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENA 225
Query: 169 LVIEDSVIGVVAGKAAGMEVVAV---PSLPKQTHRYTAADEVINSLLDLR 215
I+DS + G GM+ + + + VI+ +L+L
Sbjct: 226 YFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELP 275
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A Length = 253 | Back alignment and structure |
|---|
Score = 69.2 bits (169), Expect = 4e-14
Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 33/234 (14%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYG---KEW-----------DGREKHK---IVGKT 54
V+ D GTL + + + + + + W ++ V +
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTRE 64
Query: 55 PLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
L GL + F+ ++ ++ A L + A+ S
Sbjct: 65 ALAYTL---GTLGLEPDE-SFLADMAQAYNRLTPYPDAAQCLAEL------APLKRAILS 114
Query: 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174
N +++ ++ G +SF ++ D R KP PD + + L + P+ L + +
Sbjct: 115 NGAPDMLQALVAN-AGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSN 173
Query: 175 VIGVVAGKAAGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
V K G V V +L ++ T A + L +R E + P
Sbjct: 174 GFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A Length = 261 | Back alignment and structure |
|---|
Score = 69.1 bits (168), Expect = 7e-14
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 6/136 (4%)
Query: 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVG 140
F+ K + ++ G+ + + S+ + + + E
Sbjct: 122 FTAGRMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHF- 180
Query: 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQT 198
D K + + + A + ++ L + D A + A + V V P T
Sbjct: 181 -DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLT 239
Query: 199 HRYTAADEVINSLLDL 214
+I S +L
Sbjct: 240 DDEKTYYSLITSFSEL 255
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} Length = 251 | Back alignment and structure |
|---|
Score = 67.7 bits (165), Expect = 2e-13
Identities = 32/239 (13%), Positives = 63/239 (26%), Gaps = 32/239 (13%)
Query: 1 MAQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTF---LVKYGKEWDGR------------ 45
+AQ + + V D D TL ++ + F L Y D R
Sbjct: 5 IAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRN 64
Query: 46 -EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHL 103
+ K + + + + + L V+ + G + +
Sbjct: 65 LKIFGYGAKGMTLSMIETAIELTEARIEARDIQRIVEIGRATLQHPVEVIAGVREAVAAI 124
Query: 104 SCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163
+ + L + E KI Q G ++ F I + P + ++
Sbjct: 125 A-ADYAVVLITKGDLFHQEQKIE-QSGLSDLFPRIEVV-----SEKDPQTYARVLSEFDL 177
Query: 164 EPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEV-------INSLLDL 214
++I +S+ V A G + P H +
Sbjct: 178 PAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGW 236
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} Length = 189 | Back alignment and structure |
|---|
Score = 63.7 bits (155), Expect = 2e-12
Identities = 21/143 (14%), Positives = 49/143 (34%), Gaps = 18/143 (12%)
Query: 89 KVKALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGSD--- 142
+V A ++ + G A+ SN S I+ ++ G + F I S+
Sbjct: 32 EVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLT-NFGIIDYFDFIYASNSEL 90
Query: 143 -EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVV---------AV 191
+ KP IF L ++ + ++++ ++ ++ AG+ +
Sbjct: 91 QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQD 150
Query: 192 PSLPKQTHRYTAADEVINSLLDL 214
LP + + + +
Sbjct: 151 ERLPLVAPPFVIPVWDLADVPEA 173
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} Length = 240 | Back alignment and structure |
|---|
Score = 64.4 bits (157), Expect = 2e-12
Identities = 36/234 (15%), Positives = 76/234 (32%), Gaps = 43/234 (18%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-------------------KHKIVG 52
+ D GTL++ + L+ + GK + E ++ +
Sbjct: 9 LTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDIL 68
Query: 53 KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMAL 112
+ + A +++GL E F + A P +++L + +
Sbjct: 69 RAVYDRIA---KEWGLEPDAAER-----EEFGTSVKNWPAFPDTVEALQYLK-KHYKLVI 119
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIF---LEAAKRLNMEPSSSL 169
SN R + + F I+ + +V + KP+P+ F ++A + +E L
Sbjct: 120 LSNIDRNEFKLSNA---KLGVEFDHIITAQDVGSYKPNPNNFTYMIDALAKAGIEKKDIL 176
Query: 170 VIEDSVIG-VVAGKAAGMEVV--------AVPSLPKQTHRYTAADEVINSLLDL 214
+S+ + AG+ R D NS+ ++
Sbjct: 177 HTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEM 230
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A Length = 201 | Back alignment and structure |
|---|
Score = 54.1 bits (130), Expect = 5e-09
Identities = 34/205 (16%), Positives = 70/205 (34%), Gaps = 17/205 (8%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+ D+ GT+L+T + E L +Y K+ + I++ G
Sbjct: 4 LAFDIFGTVLDTSTVIQEFRNKQL-EYTWLLTIMGKYVEFEEITKITLRYILKVRGEESK 62
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
E + + +KA L + + SN ++ + ++G
Sbjct: 63 FDEEL--------NKWKNLKAYEDTKYLKEISEIA--EVYALSNGSINEVKQHLE-RNGL 111
Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
F I ++ V+ KPSP ++ + + ++ + V+ K AGM + V
Sbjct: 112 LRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFV 169
Query: 192 --PSLPKQTHRYTAADEVINSLLDL 214
+ D ++N +L
Sbjct: 170 NRKNTIVD-PIGGKPDVIVNDFKEL 193
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A Length = 187 | Back alignment and structure |
|---|
Score = 52.7 bits (126), Expect = 1e-08
Identities = 24/188 (12%), Positives = 46/188 (24%), Gaps = 46/188 (24%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
+ +L + DLD TL W + + +
Sbjct: 23 MARLPKLAVFDLDYTL---------------------WPFWVDTHVDPPFHKSSDGTVRD 61
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
G V+ P ++K L GVP A AS + ++
Sbjct: 62 RRG--------------------QDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQ 101
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ F F ++ + S + +D +V
Sbjct: 102 LLELFDLFRYFVHREIYPG-----SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKL 156
Query: 185 GMEVVAVP 192
G+ + +
Sbjct: 157 GVTCIHIQ 164
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* Length = 555 | Back alignment and structure |
|---|
Score = 50.7 bits (121), Expect = 3e-07
Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 22/205 (10%)
Query: 12 VILDLDGTLL--NTDGMFSEV----------LKTFLVKYGKEWDGREKHKIVGKTPLEEA 59
+ DLDG L G+ L K G +G + G+ L +
Sbjct: 6 AVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGP--EGATTRLMKGEITLSQW 63
Query: 60 AIIVEDYGLPCAKHEFVN-----EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALAS 114
++E+ C++ V + +F + K + L G A+ +
Sbjct: 64 IPLMEENCRKCSETAKVCLPKNFSIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILT 123
Query: 115 NS---HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
N+ RA + F ++ S +V KP P I+ L PS + +
Sbjct: 124 NTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSEVVFL 183
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPK 196
+D + + GM + V
Sbjct: 184 DDIGANLKPARDLGMVTILVQDTDT 208
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* Length = 211 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 4e-07
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGME-VVAVPS-LPKQTHRYTAAD 205
KP P + L A L+++ ++S ++ D + + A AA + V V + P AAD
Sbjct: 131 KPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAAD 190
Query: 206 EVINSLLDL 214
V+NSL DL
Sbjct: 191 WVLNSLADL 199
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} Length = 179 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 4e-07
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 4/70 (5%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQTHRYTA 203
KP P ++ + A+R +++ + + DS+ + A AG V +
Sbjct: 101 KPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPE 160
Query: 204 ADEVINSLLD 213
V L
Sbjct: 161 GTRVCEDLAA 170
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A Length = 259 | Back alignment and structure |
|---|
Score = 45.2 bits (108), Expect = 7e-06
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
GKP FLEA + + P +++I D V + GM + V +T +Y AAD
Sbjct: 178 GKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILV-----KTGKYKAAD 232
Query: 206 E---------VINSLLDL 214
E S
Sbjct: 233 EEKINPPPYLTCESFPHA 250
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 44.9 bits (107), Expect = 1e-05
Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 15/78 (19%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPSLPKQTHRYTAAD 205
GKPSP+ F A + + +E +++I D ++G V + GM + V +T ++ +D
Sbjct: 189 GKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQV-----RTGKFRPSD 243
Query: 206 E---------VINSLLDL 214
E +++L +
Sbjct: 244 EHHPEVKADGYVDNLAEA 261
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 Length = 218 | Back alignment and structure |
|---|
Score = 42.7 bits (101), Expect = 4e-05
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV-----PSLPKQTHRYT 202
KP+P + +EA KRL ++ SL++ D + + AGK AG+ + P R
Sbjct: 137 KPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPL 196
Query: 203 AADEVINSLLD 213
+ LL
Sbjct: 197 RDSSELGDLLA 207
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 Length = 253 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 6e-05
Identities = 8/67 (11%), Positives = 19/67 (28%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207
K + + + + S L + D+ + + A G+ +V
Sbjct: 187 KTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQV 246
Query: 208 INSLLDL 214
+ L
Sbjct: 247 YKNFETL 253
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 Length = 264 | Back alignment and structure |
|---|
Score = 40.2 bits (95), Expect = 3e-04
Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 15/81 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
GKP I A L +E +++ D+ I +G G++ + V S +P
Sbjct: 182 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDI--QSGIQNGIDSLLVTSGFTPKSAVPT 239
Query: 197 QTHRYTAADEVINSLLDLRPE 217
V++SL + E
Sbjct: 240 LPTP---PTYVVDSLDEWTFE 257
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} Length = 266 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 5e-04
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 15/81 (18%)
Query: 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV---IGVVAGKAAGMEVVAVPS-------LPK 196
GKP I +A + L + S +L++ D+ I +AG AGM+ + V + +
Sbjct: 182 GKPESIIMEQAMRVLGTDVSETLMVGDNYATDI--MAGINAGMDTLLVHTGVTKREHMTD 239
Query: 197 QTHRYTAADEVINSLLDLRPE 217
+ I+SL + P
Sbjct: 240 DMEK---PTHAIDSLTEWIPY 257
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* Length = 176 | Back alignment and structure |
|---|
Score = 38.3 bits (90), Expect = 8e-04
Identities = 8/39 (20%), Positives = 15/39 (38%)
Query: 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186
KP + M+ ++S VI D + + G+
Sbjct: 116 KPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGI 154
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 287 | |||
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 100.0 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 100.0 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 100.0 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 100.0 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 100.0 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 100.0 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 100.0 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 100.0 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 99.98 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 99.98 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 99.97 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 99.97 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 99.97 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 99.97 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 99.97 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 99.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 99.97 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 99.97 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 99.97 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 99.97 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 99.97 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 99.97 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 99.97 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 99.97 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 99.96 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 99.96 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 99.96 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 99.96 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 99.96 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 99.96 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 99.96 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 99.96 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 99.96 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 99.96 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 99.96 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 99.96 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 99.96 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.96 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 99.96 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 99.96 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 99.96 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 99.95 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 99.95 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 99.95 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 99.95 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 99.95 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 99.95 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 99.95 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 99.94 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 99.94 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 99.94 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 99.94 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 99.94 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 99.94 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 99.93 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 99.93 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 99.93 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 99.93 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 99.92 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 99.92 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 99.92 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 99.91 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 99.91 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 99.9 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 99.9 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.89 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 99.89 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 99.88 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 99.88 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 99.88 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 99.88 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 99.88 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 99.87 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 99.86 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 99.85 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 99.85 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 99.85 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 99.85 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 99.84 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 99.83 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 99.83 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 99.83 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 99.82 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 99.82 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 99.82 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 99.82 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 99.81 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.81 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 99.8 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.8 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 99.79 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.79 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 99.79 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 99.79 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.79 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 99.79 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 99.79 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 99.78 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 99.77 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 99.77 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 99.76 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 99.76 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 99.76 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.62 | |
| 3bwv_A | 180 | Putative 5'(3')-deoxyribonucleotidase; NP_764060.1 | 99.75 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 99.74 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 99.74 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 99.73 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.69 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 99.68 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.68 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 99.67 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.65 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 99.63 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 99.62 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.6 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 99.58 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 99.58 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 99.58 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 99.53 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 99.53 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.53 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 99.5 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 99.47 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.46 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 99.44 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 99.4 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 99.33 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 99.26 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 99.25 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 99.25 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 99.25 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 99.24 | |
| 2jc9_A | 555 | Cytosolic purine 5'-nucleotidase; cytosolic 5-prim | 99.21 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 99.16 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 99.13 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 99.03 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 98.95 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.88 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.88 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.86 | |
| 4g63_A | 470 | Cytosolic IMP-GMP specific 5'-nucleotidase; struct | 98.78 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 98.67 | |
| 3qle_A | 204 | TIM50P; chaperone, mitochondrion, preprotein trans | 98.58 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 98.55 | |
| 3ef0_A | 372 | RNA polymerase II subunit A C-terminal domain phos | 98.53 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 98.5 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 98.47 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 98.46 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 98.21 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 98.16 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 98.1 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 98.03 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 97.93 | |
| 3shq_A | 320 | UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila | 97.81 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.8 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 97.74 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.74 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 97.67 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 97.17 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 97.06 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 97.02 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.99 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 96.98 | |
| 3ef1_A | 442 | RNA polymerase II subunit A C-terminal domain phos | 95.99 | |
| 3geb_A | 274 | EYES absent homolog 2; hydrolase, activator, alter | 95.79 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 95.02 | |
| 3kc2_A | 352 | Uncharacterized protein YKR070W; HAD-like, mitocho | 94.97 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 92.37 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 92.27 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 88.73 | |
| 2hx1_A | 284 | Predicted sugar phosphatases of the HAD superfamil | 88.16 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 86.82 | |
| 1n08_A | 163 | Putative riboflavin kinase; phophoryl transferases | 85.2 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 84.75 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 84.34 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 83.66 | |
| 1nb0_A | 147 | Hypothetical protein FLJ11149; beta barrel, transf | 82.53 | |
| 3bnw_A | 181 | Riboflavin kinase, putative; APO structure, struct | 82.34 | |
| 2q5c_A | 196 | NTRC family transcriptional regulator; structural | 82.01 |
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=238.23 Aligned_cols=219 Identities=40% Similarity=0.618 Sum_probs=196.6
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
++++|+|+||+||||+++...+...+.++++++|............+.+.......+...++.+.....+...+.+.+.+
T Consensus 27 ~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (250)
T 3l5k_A 27 PQPVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 106 (250)
T ss_dssp CCCCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHH
T ss_pred ccCCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999988888888999999988888988888877777787777777777
Q ss_pred hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC--CcCCCCCCHHHHHHHHHHcCC
Q 023109 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD--EVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~--~~~~~kp~~~~~~~~~~~l~~ 163 (287)
......+.||+.++|+.++++|++++++||++...+...+.+..++..+|+.+++++ +....||+|+.|..+++.+|+
T Consensus 107 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi 186 (250)
T 3l5k_A 107 VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDDPEVQHGKPDPDIFLACAKRFSP 186 (250)
T ss_dssp HGGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTCTTCCSCTTSTHHHHHHHHTSSS
T ss_pred HhccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecchhhccCCCCChHHHHHHHHHcCC
Confidence 667889999999999999999999999999998888777734467888999999999 889999999999999999999
Q ss_pred CC--CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccccCCCCc
Q 023109 164 EP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPF 224 (287)
Q Consensus 164 ~~--~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~~~~~ 224 (287)
+| ++|++|||+.+|+.+|+++|+.+++++++....+.+..++++++++.++...+.+++++
T Consensus 187 ~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~ad~v~~sl~el~~~l~~l~~~ 249 (250)
T 3l5k_A 187 PPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLSRDLTTKATLVLNSLQDFQPELFGLPSY 249 (250)
T ss_dssp CCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSCGGGSTTSSEECSCGGGCCGGGGTCCCC
T ss_pred CCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCchhhcccccEeecCHHHhhHHHhcCCCC
Confidence 98 99999999999999999999999999998777777889999999999999888776643
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=233.00 Aligned_cols=190 Identities=23% Similarity=0.330 Sum_probs=158.0
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCC--CHHHH---HHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC--AKHEF---VNEV 79 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~ 79 (287)
|+|+||+|+||+||||+|+...+..+++++++++|.+++.+......|.+..+.+..++...+... ..... ....
T Consensus 1 M~MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T 4g9b_A 1 MVMKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRK 80 (243)
T ss_dssp -CCCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHH
T ss_pred CCccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHH
Confidence 456799999999999999999999999999999999988888888889998888888887776532 12111 1111
Q ss_pred HHHHHhhh---ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHH
Q 023109 80 YSMFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (287)
Q Consensus 80 ~~~~~~~~---~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~ 156 (287)
...+.... ...++.||+.++++.++++|++++++|++.. ....+ +++|+..+||.++++++++..||+|++|..
T Consensus 81 ~~~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l-~~~gl~~~fd~i~~~~~~~~~KP~p~~~~~ 157 (243)
T 4g9b_A 81 NLLYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTIL-AALELREFFTFCADASQLKNSKPDPEIFLA 157 (243)
T ss_dssp HHHHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHH-HHTTCGGGCSEECCGGGCSSCTTSTHHHHH
T ss_pred HHHHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhh-hhhhhccccccccccccccCCCCcHHHHHH
Confidence 12222222 2346789999999999999999999998764 45567 889999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc
Q 023109 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~ 197 (287)
+++++|++|++|++|||+.+|+.+|+++|+++++|+++...
T Consensus 158 a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g~~~ 198 (243)
T 4g9b_A 158 ACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAGLTG 198 (243)
T ss_dssp HHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTTCCS
T ss_pred HHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCCCCc
Confidence 99999999999999999999999999999999999986543
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-33 Score=226.17 Aligned_cols=206 Identities=26% Similarity=0.409 Sum_probs=174.7
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh-
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL- 87 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 87 (287)
||+|+||+||||+|+...+..+++++++++|.+.+.+..+...+.+..................+.+...+.+.+....
T Consensus 1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (216)
T 3kbb_A 1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFS 80 (216)
T ss_dssp CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhcccchhhHHHHHHHHHHHHHHHHH
Confidence 6899999999999999889999999999999999999888999999888888888887776667777666666555443
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
...+++||+.++++.++++|++++++||++...+...+ +.+|+.++||.++++++++..||+|+.|..+++++|++|++
T Consensus 81 ~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l-~~~~l~~~fd~~~~~~~~~~~KP~p~~~~~a~~~lg~~p~e 159 (216)
T 3kbb_A 81 ELLKENPGVREALEFVKSKRIKLALATSTPQREALERL-RRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEK 159 (216)
T ss_dssp HHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECGGGSSSCTTSTHHHHHHHHHHTCCGGG
T ss_pred HhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHH-HhcCCCccccccccccccCCCcccHHHHHHHHHhhCCCccc
Confidence 35788999999999999999999999999999999999 88999999999999999999999999999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEE-ECCCCCccc-cccCCcEEeCCccCcC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVA-VPSLPKQTH-RYTAADEVINSLLDLR 215 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~-v~~~~~~~~-~~~~a~~v~~~l~el~ 215 (287)
|+||||+.+|+.+|+++|+++++ +..+....+ ....+...+.++.++.
T Consensus 160 ~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~~~~i~~~~eli 209 (216)
T 3kbb_A 160 VVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEIL 209 (216)
T ss_dssp EEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTTCSEEECGGGHH
T ss_pred eEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCCCcEECCHHHHH
Confidence 99999999999999999999985 555543332 2333333333455543
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-32 Score=217.32 Aligned_cols=208 Identities=25% Similarity=0.374 Sum_probs=179.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (287)
++|+|+||+||||+++...+...+.++++++|............+.+....+..+....+.......+...+.+.+....
T Consensus 4 m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (214)
T 3e58_A 4 MVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFIGGNTKQVWENILRDEYDKWDVSTLQEEYNTYKQNNP 83 (214)
T ss_dssp CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHTTSCGGGCHHHHHGGGGGGSCHHHHHHHHHHHHHHSC
T ss_pred cccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHhh
Confidence 48999999999999999999999999999999988777777888888777777777766655556666666666555443
Q ss_pred c--cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 88 C--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 88 ~--~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
. ...++|++.++++.+++.|++++++|+++...++..+ +++|+..+|+.++++++.+..||+|+.++++++.+|++|
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~ 162 (214)
T 3e58_A 84 LPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRAL-EENRLQGFFDIVLSGEEFKESKPNPEIYLTALKQLNVQA 162 (214)
T ss_dssp CCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGCSSCTTSSHHHHHHHHHHTCCG
T ss_pred cccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHH-HHcCcHhheeeEeecccccCCCCChHHHHHHHHHcCCCh
Confidence 2 3468999999999999999999999999999999999 889999999999999999999999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
++|++|||+.+|+.+|+++|+.+++++++.... ....++++++++.++.+.
T Consensus 163 ~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~-~~~~a~~~~~~~~el~~~ 213 (214)
T 3e58_A 163 SRALIIEDSEKGIAAGVAADVEVWAIRDNEFGM-DQSAAKGLLDSLTDVLDL 213 (214)
T ss_dssp GGEEEEECSHHHHHHHHHTTCEEEEECCSSSCC-CCTTSSEEESSGGGGGGG
T ss_pred HHeEEEeccHhhHHHHHHCCCEEEEECCCCccc-hhccHHHHHHHHHHHHhh
Confidence 999999999999999999999999999854333 237889999999998653
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-32 Score=218.14 Aligned_cols=201 Identities=16% Similarity=0.241 Sum_probs=160.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-CHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||+|+...+..+++++++++|... .........|.+....+... ++. ....++.+.+.+.+...
T Consensus 3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~ 78 (210)
T 2ah5_A 3 SITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC---LSK-DQISEAVQIYRSYYKAK 78 (210)
T ss_dssp TCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT---SCG-GGHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH---cCH-HHHHHHHHHHHHHHHHh
Confidence 58999999999999999989899999999999876 34555566676654433222 111 12334444444444332
Q ss_pred -hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 87 -~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
....+++||+.++|+.|++ |++++++||++...++..+ +++|+..+|+.+++++ +..||+|+.|.++++++|++|
T Consensus 79 ~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~--~~~Kp~p~~~~~~~~~lg~~p 154 (210)
T 2ah5_A 79 GIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSS--PEAPHKADVIHQALQTHQLAP 154 (210)
T ss_dssp GGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEEC--SSCCSHHHHHHHHHHHTTCCG
T ss_pred ccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-HhcCchhheeeeecCC--CCCCCChHHHHHHHHHcCCCc
Confidence 2346789999999999999 9999999999998898888 8899999999999887 789999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcc-cc-ccCCcEEeCCccCcCc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HR-YTAADEVINSLLDLRP 216 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~-~~-~~~a~~v~~~l~el~~ 216 (287)
++|++||||.+|+.+|+++|+.+++++.+.... +. ...++++++++.++..
T Consensus 155 ~~~~~vgDs~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 155 EQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred ccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 999999999999999999999999998865432 22 2468999999988753
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-31 Score=217.82 Aligned_cols=213 Identities=22% Similarity=0.217 Sum_probs=177.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHH---HHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN---EVYSM 82 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 82 (287)
|+++|+|+||+||||+++...+...+..+++++|............+......+..+....+.......+.. .+.+.
T Consensus 3 ~~~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (233)
T 3s6j_A 3 LRPQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETGMSITDEQAERLSEKHAQA 82 (233)
T ss_dssp --CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC----CCHHHHHHHHHHHHHH
T ss_pred CCcCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 456899999999999999999999999999999999988888888888888888888877766544444332 23333
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
+........++|++.++++.+++.|++++++|+++...++..+ +.+|+..+|+.++++++....||+++.++++++.+|
T Consensus 83 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~ 161 (233)
T 3s6j_A 83 YERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINL-KALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIG 161 (233)
T ss_dssp HHHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHH-HTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTT
T ss_pred HHHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHH-HhcchhhhhheeeccccCCCCCCChHHHHHHHHHhC
Confidence 3333446789999999999999999999999999999999899 889999999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-cccc-cCCcEEeCCccCcCcccc
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRY-TAADEVINSLLDLRPEKW 219 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~~-~~a~~v~~~l~el~~~~~ 219 (287)
++|++|++|||+.+|+.+|+++|+.++++.++... .... ..++++++++.++...+.
T Consensus 162 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l~ 220 (233)
T 3s6j_A 162 APIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGELERAGALRVYEDPLDLLNHLD 220 (233)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTGG
T ss_pred CCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHhHHhcCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999999886333 3333 358999999999977654
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-31 Score=220.29 Aligned_cols=202 Identities=24% Similarity=0.368 Sum_probs=165.9
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCC--H---HHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA--K---HEFVNEVYS 81 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~ 81 (287)
.|+|+|+||+||||+|+...+..+++++++++|.+++........+.+..+....+......... . ..+......
T Consensus 24 ~MIKaViFDlDGTLvDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (250)
T 4gib_A 24 AMIEAFIFDLDGVITDTAYYHYMAWRKLAHKVGIDIDTKFNESLKGISRMESLDRILEFGNKKYSFSEEEKVRMAEEKNN 103 (250)
T ss_dssp CCCCEEEECTBTTTBCCHHHHHHHHHHHHHTTTCCCCTTGGGGTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHH
T ss_pred chhheeeecCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCcchHHHHHHhhhhhcCCCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999888777788888888877777766554322 1 122222333
Q ss_pred HHHhhh---ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHH
Q 023109 82 MFSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 82 ~~~~~~---~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
.+.... ...++.||+.++++.++++|+++++.|++.. +...+ +++|+.++||.++++++++..||+|+.|..++
T Consensus 104 ~~~~~~~~~~~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~~--~~~~L-~~~gl~~~Fd~i~~~~~~~~~KP~p~~~~~a~ 180 (250)
T 4gib_A 104 YYVSLIDEITSNDILPGIESLLIDVKSNNIKIGLSSASKN--AINVL-NHLGISDKFDFIADAGKCKNNKPHPEIFLMSA 180 (250)
T ss_dssp HHHHHHTTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHHTCGGGCSEECCGGGCCSCTTSSHHHHHHH
T ss_pred HHHHHHhhccccccchhHHHHHHHHHhcccccccccccch--hhhHh-hhcccccccceeecccccCCCCCcHHHHHHHH
Confidence 333322 2456899999999999999999998777643 45677 88899999999999999999999999999999
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
+++|++|++|+||||+++|+.+|+++|+.++++++. +....|+++++++.|+.
T Consensus 181 ~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~----~~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 181 KGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY----ENLKKANLVVDSTNQLK 233 (250)
T ss_dssp HHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT----TTTTTSSEEESSGGGCC
T ss_pred HHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh----hHhccCCEEECChHhCC
Confidence 999999999999999999999999999999999763 22346899999999984
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-32 Score=220.58 Aligned_cols=213 Identities=26% Similarity=0.309 Sum_probs=178.0
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
..+++|+|+||+||||+++...+...+.++++++|.......+....+......+..+............+...+.+.+.
T Consensus 15 ~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (237)
T 4ex6_A 15 PAAADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFG 94 (237)
T ss_dssp --CCCEEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHTSCTTSHHHHHHHHHHHHHHH
T ss_pred CcccCCEEEEcCCCCCcCCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCccHHHHHHHHhCCCCCHHHHHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999777777888888888887776665443222223344444444444
Q ss_pred hhh---ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHc
Q 023109 85 DHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (287)
Q Consensus 85 ~~~---~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l 161 (287)
+.. ....++||+.++|+.++++|++++++|+++...++..+ +++|+..+|+.++++++++..||+|+.|..+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l 173 (237)
T 4ex6_A 95 AHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIA-ELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGL 173 (237)
T ss_dssp HHHHHHGGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHH-HHHTGGGTCSEEECTTTSSSCTTSSHHHHHHHHHH
T ss_pred HhcccccCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHH-HHcCchhheeeEEeCCCCCCCCCCHHHHHHHHHHc
Confidence 443 56778999999999999999999999999999999888 88899999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-cccc-cCCcEEeCCccCcCccc
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRY-TAADEVINSLLDLRPEK 218 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~~-~~a~~v~~~l~el~~~~ 218 (287)
|++|++|++|||+.+|+.+|+.+|+.++++.++... .... ..++++++++.++...+
T Consensus 174 g~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 174 GIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred CCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999987544 3333 47899999999986554
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=99.98 E-value=4e-31 Score=217.98 Aligned_cols=211 Identities=23% Similarity=0.360 Sum_probs=175.1
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (287)
+|+++|+|+||+||||+++...+...+.++++++|............+......+..++.. ++.+...+.+...+.. +
T Consensus 20 ~m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 98 (243)
T 3qxg_A 20 MRKKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHE-K 98 (243)
T ss_dssp --CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-H
T ss_pred ccccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHH-H
Confidence 4567899999999999999999999999999999999888777777788877777666544 5665555554433322 2
Q ss_pred Hhhh---ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcCCCCCCHHHHHHHH
Q 023109 84 SDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 84 ~~~~---~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
...+ ....++|++.++++.++++|++++++||++...+...+ +. ++..+| +.++++++....||+|+.|.+++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~d~i~~~~~~~~~kp~~~~~~~~~ 176 (243)
T 3qxg_A 99 SILFNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERL-EH-NFPGMFHKELMVTAFDVKYGKPNPEPYLMAL 176 (243)
T ss_dssp HHHHHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTH-HH-HSTTTCCGGGEECTTTCSSCTTSSHHHHHHH
T ss_pred HHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHH-HH-hHHHhcCcceEEeHHhCCCCCCChHHHHHHH
Confidence 2222 35678999999999999999999999999988888888 66 999999 99999999999999999999999
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCccc
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~~ 218 (287)
+.+|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++.+.+
T Consensus 177 ~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 177 KKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp HHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred HHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999999986544332 357899999999986654
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=99.98 E-value=7.3e-31 Score=216.41 Aligned_cols=212 Identities=22% Similarity=0.368 Sum_probs=174.3
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHH-hCCCCCHHHHHHHHHHH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED-YGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 82 (287)
|+|+++|+|+||+||||+++...+...+.++++++|............+......+..++.. ++.....+.+......
T Consensus 18 ~~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 96 (247)
T 3dv9_A 18 YESIDLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQA- 96 (247)
T ss_dssp CSCCCCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHH-
T ss_pred CCCCCCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHH-
Confidence 34567899999999999999999999999999999999888777777788877776666544 5665555555433322
Q ss_pred HHhhh---ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcCCCCCCHHHHHHH
Q 023109 83 FSDHL---CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 83 ~~~~~---~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~~~kp~~~~~~~~ 157 (287)
+...+ ....++||+.++++.++++|++++++||++...+...+ +. |+..+| +.++++++.+..||+|+.+..+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~-~l~~~f~~~~~~~~~~~~~~kp~~~~~~~~ 174 (247)
T 3dv9_A 97 KTEEFNKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRL-NH-NFPGIFQANLMVTAFDVKYGKPNPEPYLMA 174 (247)
T ss_dssp HHHHHTTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHH-HH-HSTTTCCGGGEECGGGCSSCTTSSHHHHHH
T ss_pred HHHHHHhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHH-Hh-hHHHhcCCCeEEecccCCCCCCCCHHHHHH
Confidence 22222 34788999999999999999999999999988888888 67 999999 9999999999999999999999
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCccc
Q 023109 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 158 ~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~~ 218 (287)
++.+|++|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++...+
T Consensus 175 ~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 175 LKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp HHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred HHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999986544332 357899999999986554
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=218.89 Aligned_cols=214 Identities=28% Similarity=0.387 Sum_probs=180.5
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHH-HHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE-KHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
|+++++|+|+||+||||+++...+...+.++++++|....... ...+.+......+..+...++...... ....+.+.
T Consensus 23 M~~~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 101 (259)
T 4eek_A 23 MPDAPFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHDFVPPPD-FLDVLETR 101 (259)
T ss_dssp --CCCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHCCCCCTT-HHHHHHHH
T ss_pred HHhcCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHH
Confidence 4455789999999999999999999999999999999877654 456778888888888888887664433 33344444
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccce-eeccCCcC-CCCCCHHHHHHHHHH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV-IVGSDEVR-TGKPSPDIFLEAAKR 160 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~-i~~~~~~~-~~kp~~~~~~~~~~~ 160 (287)
+.+.+....++|++.++++.+++.|++++++||++...++..+ +.+|+..+|+. ++++++.+ ..||+++.|.++++.
T Consensus 102 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~i~~~~~~~~~~Kp~~~~~~~~~~~ 180 (259)
T 4eek_A 102 FNAAMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKL-RVAGLTELAGEHIYDPSWVGGRGKPHPDLYTFAAQQ 180 (259)
T ss_dssp HHHHHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHH-HHTTCHHHHCSCEECGGGGTTCCTTSSHHHHHHHHH
T ss_pred HHHHhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HhcChHhhccceEEeHhhcCcCCCCChHHHHHHHHH
Confidence 5444467889999999999999999999999999999999899 88999999999 99999999 999999999999999
Q ss_pred cCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-----ccc-ccCCcEEeCCccCcCcccc
Q 023109 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-----THR-YTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 161 l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-----~~~-~~~a~~v~~~l~el~~~~~ 219 (287)
+|++|++|++|||+.+|+.+|+++|+.+++++++... +.. ...++++++++.++.+.+.
T Consensus 181 lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l~ 245 (259)
T 4eek_A 181 LGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAALA 245 (259)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHHH
T ss_pred cCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHHH
Confidence 9999999999999999999999999999999876433 122 4568999999999977654
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=214.61 Aligned_cols=206 Identities=22% Similarity=0.282 Sum_probs=170.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||+|+...+..++.++++++|.. .+.+.+....+.+....+..++.. ...+++...+.+.+...
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 77 (222)
T 2nyv_A 2 SLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLKD----KFREEYVEVFRKHYLEN 77 (222)
T ss_dssp EECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHGG----GCCTHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhCh----HHHHHHHHHHHHHHHHh
Confidence 4789999999999999999989999999999876 444455566777776666555431 12344545555555443
Q ss_pred -hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 87 -~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
....+++||+.++|+.++++|++++++||++...++..+ +.+|+..+|+.++++++....||+|+.+..+++.+|++|
T Consensus 78 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~ 156 (222)
T 2nyv_A 78 PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKIL-DILNLSGYFDLIVGGDTFGEKKPSPTPVLKTLEILGEEP 156 (222)
T ss_dssp SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTSSCTTCCTTHHHHHHHHHHTCCG
T ss_pred ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH-HHcCCHHHheEEEecCcCCCCCCChHHHHHHHHHhCCCc
Confidence 246788999999999999999999999999999898888 888999999999999999999999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcccc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~ 219 (287)
++|++|||+.+|+.+|+++|+.++++..+...... ..++++++++.++...+.
T Consensus 157 ~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~~~~~~~~el~~~l~ 209 (222)
T 2nyv_A 157 EKALIVGDTDADIEAGKRAGTKTALALWGYVKLNS-QIPDFTLSRPSDLVKLMD 209 (222)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCSCCC-CCCSEEESSTTHHHHHHH
T ss_pred hhEEEECCCHHHHHHHHHCCCeEEEEcCCCCCccc-cCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999886544433 678999999999876543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-30 Score=211.45 Aligned_cols=209 Identities=18% Similarity=0.199 Sum_probs=169.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhC------------C-CHH----HHHHHHHHHhCC
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------K-TPL----EEAAIIVEDYGL 68 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~-~~~----~~~~~~~~~~~~ 68 (287)
|+++|+|+||+||||+++...+...+.++++++|........+.+.+ . ... ..+..++...+.
T Consensus 4 mm~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (238)
T 3ed5_A 4 MKRYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGY 83 (238)
T ss_dssp CCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCC
Confidence 45689999999999999999999999999999998876644322211 1 111 123445555665
Q ss_pred CCCHHHHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCC
Q 023109 69 PCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (287)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~ 147 (287)
+.....+... +.+.. ....++|++.++++.+++. ++++++||++...++..+ +.+|+..+|+.++++++.+..
T Consensus 84 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~ 157 (238)
T 3ed5_A 84 EADGALLEQK----YRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRL-RDSGLFPFFKDIFVSEDTGFQ 157 (238)
T ss_dssp CCCHHHHHHH----HHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTSC
T ss_pred CCcHHHHHHH----HHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcChHhhhheEEEecccCCC
Confidence 5444444333 32222 3578899999999999999 999999999999998888 888999999999999999999
Q ss_pred CCCHHHHHHHHHHcC-CCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccccC
Q 023109 148 KPSPDIFLEAAKRLN-MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (287)
Q Consensus 148 kp~~~~~~~~~~~l~-~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~ 220 (287)
||+|+.+.++++.+| ++|++|++|||+. +|+.+|+++|+.+++++++.........++++++++.++...+.+
T Consensus 158 kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l~~ 232 (238)
T 3ed5_A 158 KPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHILNI 232 (238)
T ss_dssp TTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHHTC
T ss_pred CCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCCCCCCcccCCCCeEECCHHHHHHHHHh
Confidence 999999999999999 9999999999998 999999999999999998765566677899999999999776543
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-31 Score=217.63 Aligned_cols=207 Identities=20% Similarity=0.284 Sum_probs=166.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC--CCHHHHHHHhCCCHHHHHHHHHHHh------------------C
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE--WDGREKHKIVGKTPLEEAAIIVEDY------------------G 67 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~------------------~ 67 (287)
++|+|+||+||||+|+...+..+++++++++|.. .+...+....+.+....+....... +
T Consensus 3 ~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 2hi0_A 3 KYKAAIFDMDGTILDTSADLTSALNYAFEQTGHRHDFTVEDIKNFFGSGVVVAVTRALAYEAGSSRESLVAFGTKDEQIP 82 (240)
T ss_dssp SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTSCCCCCHHHHHHHCSSCHHHHHHHHHHHHTTCCHHHHTTTTSTTCCCC
T ss_pred cccEEEEecCCCCccCHHHHHHHHHHHHHHcCCCCCCCHHHHHHhcCccHHHHHHHHHHhcccccccccccccccccccC
Confidence 4799999999999999999999999999999986 5667777788887666665554211 1
Q ss_pred CCCCHH---HHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC
Q 023109 68 LPCAKH---EFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (287)
Q Consensus 68 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~ 143 (287)
.....+ ++...+.+.+... ....+++||+.++|+.|+++|++++++||++...++..+ +++|+. +|+.++++++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~-~f~~~~~~~~ 160 (240)
T 2hi0_A 83 EAVTQTEVNRVLEVFKPYYADHCQIKTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLV-EELFPG-SFDFALGEKS 160 (240)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTSSSSCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHSTT-TCSEEEEECT
T ss_pred CCCCHHHHHHHHHHHHHHHHHhhhhcCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCc-ceeEEEecCC
Confidence 111222 2223333333332 235678899999999999999999999999998888888 888988 9999999999
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-ccc-ccCCcEEeCCccCcCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THR-YTAADEVINSLLDLRP 216 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~-~~~a~~v~~~l~el~~ 216 (287)
+...||+|+.|.++++.+|++|++|++|||+.+|+.+|+++|+.++++..+... ... ...++++++++.++..
T Consensus 161 ~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~ 235 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWGFRSVPFLQKHGATVIVDTAEKLEE 235 (240)
T ss_dssp TSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHHHHHTTCCCEECSHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCCCCchhHHHhcCCCEEECCHHHHHH
Confidence 999999999999999999999999999999999999999999999999886533 222 2468999999988754
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-30 Score=211.85 Aligned_cols=201 Identities=28% Similarity=0.356 Sum_probs=158.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCC--CCCHHHH---HHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL--PCAKHEF---VNEVYSM 82 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~ 82 (287)
++|+|+||+||||+++...+...+..+++++|............+.+.......+....+. ......+ ...+...
T Consensus 1 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (233)
T 3nas_A 1 SLKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRD 80 (233)
T ss_dssp -CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHH
Confidence 3789999999999999999999999999999999888888889999988888888888766 3343333 3333333
Q ss_pred HHhhhcc---CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 83 FSDHLCK---VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 83 ~~~~~~~---~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
+...... .+++||+.++|+.+++.|++++++||++. ++..+ +.+|+..+|+.++++++....||+|+.|.++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~ 157 (233)
T 3nas_A 81 YQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKIL-RRLAIIDDFHAIVDPTTLAKGKPDPDIFLTAAA 157 (233)
T ss_dssp HHHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCTTTCSEECCC---------CCHHHHHHH
T ss_pred HHHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHH-HHcCcHhhcCEEeeHhhCCCCCCChHHHHHHHH
Confidence 4333322 34799999999999999999999999865 66677 888999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
.+|++|++|++|||+.+|+.+|+++|+.+++++.. ...+ .++++++++.++.
T Consensus 158 ~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~~~~---~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 158 MLDVSPADCAAIEDAEAGISAIKSAGMFAVGVGQG---QPML-GADLVVRQTSDLT 209 (233)
T ss_dssp HHTSCGGGEEEEECSHHHHHHHHHTTCEEEECC-----------CSEECSSGGGCC
T ss_pred HcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEECCc---cccc-cCCEEeCChHhCC
Confidence 99999999999999999999999999999999773 2233 8899999999985
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=212.34 Aligned_cols=209 Identities=19% Similarity=0.208 Sum_probs=170.5
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-CHHHHHHHhCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFS 84 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 84 (287)
+++|+|+||+||||+++...+...+..+++++|... ....+....+.+....+.... +.+. ....+...+.+.+.
T Consensus 2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 78 (226)
T 3mc1_A 2 SLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEYY---NFDEETATVAIDYYRDYFK 78 (226)
T ss_dssp CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHHH---CCCHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHh---CCCHHHHHHHHHHHHHHHH
Confidence 358999999999999999989899999999999875 445566777877766554443 3321 11122222223222
Q ss_pred hh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 85 ~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
.. .....+.||+.++++.++++|++++++|++....++..+ +.+|+..+|+.+++++.....||+|+.+.++++.+|+
T Consensus 79 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~lgi 157 (226)
T 3mc1_A 79 AKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQIL-EHFKLAFYFDAIVGSSLDGKLSTKEDVIRYAMESLNI 157 (226)
T ss_dssp TTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSSSCSHHHHHHHHHHHHTC
T ss_pred HhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHhCCHhheeeeeccCCCCCCCCCHHHHHHHHHHhCc
Confidence 21 235788999999999999999999999999999999889 8899999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCcccc
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~~~ 219 (287)
+|++|++|||+.+|+.+|+++|+.++++.++...... +..++++++++.++...+.
T Consensus 158 ~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~s~~el~~~~~ 215 (226)
T 3mc1_A 158 KSDDAIMIGDREYDVIGALKNNLPSIGVTYGFGSYEELKNAGANYIVNSVDELHKKIL 215 (226)
T ss_dssp CGGGEEEEESSHHHHHHHHTTTCCEEEESSSSSCHHHHHHHTCSEEESSHHHHHHHHH
T ss_pred CcccEEEECCCHHHHHHHHHCCCCEEEEccCCCCHHHHHHcCCCEEECCHHHHHHHHH
Confidence 9999999999999999999999999999987654443 4788999999999977654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-30 Score=213.08 Aligned_cols=207 Identities=15% Similarity=0.202 Sum_probs=170.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCC-CHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC-AKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||+++...+...+..+++++|.......+....+......+... ++.+. ....+...+.+.+...
T Consensus 28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 104 (240)
T 3sd7_A 28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY---YKFEDKKAKEAVEKYREYFADK 104 (240)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHT
T ss_pred hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH---hCCCHHHHHHHHHHHHHHHHHh
Confidence 5799999999999999999999999999999988777777777787766554333 23321 1222233333333332
Q ss_pred -hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC-
Q 023109 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME- 164 (287)
Q Consensus 87 -~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~- 164 (287)
....+++||+.++++.+++.|++++++|+++...++..+ +.+|+..+|+.++++++.+..||+++.+..+++.+|++
T Consensus 105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~ 183 (240)
T 3sd7_A 105 GIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETIL-RYFDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKD 183 (240)
T ss_dssp GGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCC
T ss_pred cccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHH-HHcCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCC
Confidence 235789999999999999999999999999999999899 88999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCccc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~~ 218 (287)
|++|++|||+.+|+.+|+++|+.++++..+...... ...++++++++.++...+
T Consensus 184 ~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 184 KDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 999999999999999999999999999986554443 478899999999986543
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-30 Score=205.58 Aligned_cols=201 Identities=20% Similarity=0.327 Sum_probs=165.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh--
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-- 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 85 (287)
++|+|+||+||||+++...+...+.++++++|........+...|.+..+.+.. ++.+ ...+...+...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~ 76 (209)
T 2hdo_A 3 TYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTE----LGIA--ASEFDHFQAQYEDVMA 76 (209)
T ss_dssp CCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHH----TTCC--GGGHHHHHHHHHHHHT
T ss_pred cccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHH----cCCC--HHHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999998888888878888776555443 3433 22332222222222
Q ss_pred -hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 86 -HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 86 -~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
.....++.||+.++|+.++++ ++++++|+++...++..+ +.+|+..+|+.++++++.+..||+|+.+.++++.+|++
T Consensus 77 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~KP~~~~~~~~~~~~~~~ 154 (209)
T 2hdo_A 77 SHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVA 154 (209)
T ss_dssp TCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCC
T ss_pred hhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHH-HHcChHhhccEEEecCcCCCCCCCcHHHHHHHHHcCCC
Confidence 224678899999999999999 999999999999999888 88899999999999999999999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCC-ccccccCCcEEeCCccCcCcc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK-QTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~-~~~~~~~a~~v~~~l~el~~~ 217 (287)
|++|++|||+.+|+.+++.+|+.+++++.+.. .+.... ++++++++.++...
T Consensus 155 ~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~-a~~~~~~~~el~~~ 207 (209)
T 2hdo_A 155 PQNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQK-VAHRFQKPLDILEL 207 (209)
T ss_dssp GGGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSC-CSEEESSGGGGGGG
T ss_pred cccEEEECCChhhHHHHHHcCCeEEEEcCCCCChhhhcc-CCEEeCCHHHHHHh
Confidence 99999999999999999999999999987543 333344 99999999988653
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-30 Score=214.48 Aligned_cols=215 Identities=18% Similarity=0.224 Sum_probs=170.7
Q ss_pred ccccCCccEEEEecCCcccccHHHH-HHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHH----------HHHHhCCCCC
Q 023109 3 QPLKKLMSCVILDLDGTLLNTDGMF-SEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI----------IVEDYGLPCA 71 (287)
Q Consensus 3 ~~~~~~~k~iifDlDGTL~d~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 71 (287)
.++|+++|+|+||+||||+++.... ...+..+++++|........+...+......+.. +...++....
T Consensus 8 ~~~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (277)
T 3iru_A 8 VFCAGPVEALILDWAGTTIDFGSLAPVYAFMELFKQEGIEVTQAEAREPMGTEKSEHIRRMLGNSRIANAWLSIKGQASN 87 (277)
T ss_dssp CCCCCCCCEEEEESBTTTBSTTCCHHHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHTTSHHHHHHHHHHHSSCCC
T ss_pred hhhhccCcEEEEcCCCCcccCCcccHHHHHHHHHHHhCCCCCHHHHHHHhcCchHHHHHHhccchHHHHHHHHHhccCCC
Confidence 3445678999999999999986644 6788889999999888877777777665444332 3344454444
Q ss_pred HHHHH---HHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc-cceeeccCCcCC
Q 023109 72 KHEFV---NEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-FSVIVGSDEVRT 146 (287)
Q Consensus 72 ~~~~~---~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~-fd~i~~~~~~~~ 146 (287)
...+. ..+...+.+.. ....++||+.++|+.+++.|++++++||.+...++..+ +.+++..+ |+.++++++...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~ 166 (277)
T 3iru_A 88 EEDIKRLYDLFAPIQTRIVAQRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPAL-IAAKEQGYTPASTVFATDVVR 166 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHHHTTCCCSEEECGGGSSS
T ss_pred HHHHHHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHH-HhcCcccCCCceEecHHhcCC
Confidence 43332 22233332222 35788999999999999999999999999999888888 77888887 899999999999
Q ss_pred CCCCHHHHHHHHHHcCCCC-CcEEEEeCCHhhHHHHHHcCCeEEEECCCCC------------------------cccc-
Q 023109 147 GKPSPDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK------------------------QTHR- 200 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~~~-~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~------------------------~~~~- 200 (287)
.||+|..|..+++.+|++| ++|++|||+.+|+.+|+++|+.++++.++.. ....
T Consensus 167 ~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 246 (277)
T 3iru_A 167 GRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLF 246 (277)
T ss_dssp CTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHh
Confidence 9999999999999999999 9999999999999999999999999999753 1222
Q ss_pred ccCCcEEeCCccCcCccc
Q 023109 201 YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 201 ~~~a~~v~~~l~el~~~~ 218 (287)
...++++++++.++...+
T Consensus 247 ~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 247 NAGAHYVIDSVADLETVI 264 (277)
T ss_dssp HHTCSEEESSGGGTHHHH
T ss_pred hCCCCEEecCHHHHHHHH
Confidence 346899999999987654
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-29 Score=207.54 Aligned_cols=207 Identities=20% Similarity=0.198 Sum_probs=166.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC---CHHHHHHHh-------------C-CCHH----HHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---DGREKHKIV-------------G-KTPL----EEAAIIVED 65 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~-------------~-~~~~----~~~~~~~~~ 65 (287)
|++|+|+||+||||+++...+...+..+++++|... ....+.... + .... ..+..++..
T Consensus 3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (240)
T 3qnm_A 3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA 82 (240)
T ss_dssp CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 358999999999999999988899999999998775 443332111 1 1111 123445556
Q ss_pred hCCCCCHHHHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc
Q 023109 66 YGLPCAKHEFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (287)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~ 144 (287)
.+.+ .......+.+.+.... ....+.|++.++++.++ +|++++++||++...++..+ +.+|+..+|+.++++++.
T Consensus 83 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l-~~~~l~~~f~~~~~~~~~ 158 (240)
T 3qnm_A 83 VGVE--DEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKM-RSAGVDRYFKKIILSEDL 158 (240)
T ss_dssp TTCC--CHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGGGT
T ss_pred cCCC--cHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHH-HHcChHhhceeEEEeccC
Confidence 6654 3344444444444433 46788999999999999 99999999999999998888 888999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
+..||+++++..+++.+|++|++|++|||++ +|+.+|+++|+.+++++++.. ......|+++++++.|+....
T Consensus 159 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~~-~~~~~~~d~vi~sl~e~~~~~ 232 (240)
T 3qnm_A 159 GVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTER-TVFPFQPTYHIHSLKELMNLL 232 (240)
T ss_dssp TCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCC-CCCSSCCSEEESSTHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCCC-CCcCCCCceEECCHHHHHHHH
Confidence 9999999999999999999999999999996 999999999999999999654 345678999999999986654
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-29 Score=206.07 Aligned_cols=211 Identities=17% Similarity=0.212 Sum_probs=169.3
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-CHHHHHHHhCCCHHHHHHHHHHHh----CCCCCHHHH---HH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDY----GLPCAKHEF---VN 77 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~ 77 (287)
..++|+|+||+||||+|+...+..++.++++++|... ....+..+.+......+...+... +.....+.+ ..
T Consensus 20 ~~~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (243)
T 2hsz_A 20 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 99 (243)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CccCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCchHHHHHHHHhhhhhccccccCCHHHHHHHHH
Confidence 4568999999999999999999899999999999864 455566677777666555544321 222233322 22
Q ss_pred HHHHHHHhh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHH
Q 023109 78 EVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (287)
Q Consensus 78 ~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~ 156 (287)
.+.+.+... ....+++||+.++|+.++++|++++++||++...++..+ +.+|+..+|+.++++++....||+|+.+.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~~ 178 (243)
T 2hsz_A 100 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 178 (243)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHH-HHcCchheEEEEEecccCCCCCcCHHHHHH
Confidence 333333332 235678999999999999999999999999999888888 888999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc--cccccCCcEEeCCccCcCcc
Q 023109 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ--THRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~--~~~~~~a~~v~~~l~el~~~ 217 (287)
+++.+|++|++|++|||+.+|+.+|+++|+.++++..+... ......++++++++.++...
T Consensus 179 ~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~ad~vi~~~~el~~~ 241 (243)
T 2hsz_A 179 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKI 241 (243)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred HHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcCCCCchhhhhhCCCCEEECCHHHHHHH
Confidence 99999999999999999999999999999999999886432 22356789999999988643
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-29 Score=201.73 Aligned_cols=209 Identities=22% Similarity=0.364 Sum_probs=172.1
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-HHHHHHHhCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (287)
++|+|+||+||||++++..+...+..+++++|.... ........|.........+....+.+ .....+...+...+.+
T Consensus 8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (226)
T 1te2_A 8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS 87 (226)
T ss_dssp CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence 589999999999999998888889999999988755 33444556777666666666655543 2344454444444443
Q ss_pred hh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 86 HL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 86 ~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
.. ....+.|++.++++.+++.|++++++|+.+...++..+ +.+++..+|+.++++++.+..||++..+.++++.+|++
T Consensus 88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~~~i~ 166 (226)
T 1te2_A 88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVD 166 (226)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTSC
T ss_pred HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHH-HhcCcHhhCcEEEeccccCCCCCChHHHHHHHHHcCCC
Confidence 32 35788999999999999999999999999998888888 88899999999999999999999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-cccccCCcEEeCCccCcCcc
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~~~~a~~v~~~l~el~~~ 217 (287)
++++++|||+.||+++++.+|+.+++++.+... +..+..|+++++++.++...
T Consensus 167 ~~~~i~iGD~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 167 PLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp GGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred HHHeEEEeCCHHHHHHHHHcCCEEEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 999999999999999999999999999886543 34467889999999998654
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=206.74 Aligned_cols=207 Identities=15% Similarity=0.131 Sum_probs=162.2
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHH---HHHH----------hCCCHH---HHHHHHHHHhCCCCC
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE---KHKI----------VGKTPL---EEAAIIVEDYGLPCA 71 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~---~~~~----------~~~~~~---~~~~~~~~~~~~~~~ 71 (287)
++|+|+||+||||++++..+...+.++++++|....... +... .|.+.. ..+..+...++.+
T Consensus 3 m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-- 80 (235)
T 2om6_A 3 EVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGKLKVD-- 80 (235)
T ss_dssp CCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHHHTCC--
T ss_pred CceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHHhCCC--
Confidence 479999999999999998888888999998887654322 2111 144444 4455555555543
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCccccceeeccCCcCCCC
Q 023109 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (287)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~---~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~k 148 (287)
..... .+...+...+....++|++.++++.+++.|++++++|++. ...++..+ +.+|+..+|+.++++++.+..|
T Consensus 81 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~k 158 (235)
T 2om6_A 81 VELVK-RATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLL-ERFGLMEFIDKTFFADEVLSYK 158 (235)
T ss_dssp HHHHH-HHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTCCT
T ss_pred HHHHH-HHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHH-HhCCcHHHhhhheeccccCCCC
Confidence 22222 2222233333333459999999999999999999999999 88888888 8889999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
|+|+.+..+++.+|++|++|++|||+. ||+.+++.+|+.+++++.+....+....++++++++.++...+
T Consensus 159 p~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 159 PRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp TCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred CCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 999999999999999999999999999 9999999999999999987544444556889999999986544
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-28 Score=199.64 Aligned_cols=200 Identities=23% Similarity=0.309 Sum_probs=164.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMFS 84 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 84 (287)
+|+|+||+||||++++..+...+.++++++|.. ..........|.+....+..+....+.+...... ...+.+.+.
T Consensus 2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (221)
T 2wf7_A 2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNYV 81 (221)
T ss_dssp CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHH
Confidence 789999999999999988888899999999987 7776777778888777777777777654443332 223333333
Q ss_pred hhhc---cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHc
Q 023109 85 DHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (287)
Q Consensus 85 ~~~~---~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l 161 (287)
.... ...+.|++.++++.+++.|++++++|+. ...+..+ +.+++..+|+.++++++.+..||+|+.+..+++.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~l 158 (221)
T 2wf7_A 82 KMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAV 158 (221)
T ss_dssp HHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHH-HHTTCGGGCSEECCTTTSSSCTTSSHHHHHHHHHT
T ss_pred HHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHH-HHcChHHHcceEeccccCCCCCCChHHHHHHHHHc
Confidence 3222 3567899999999999999999999998 4456677 77899999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
|++|++|++|||+.||+++++.+|+.+++++. .+..+ .++++++++.++.
T Consensus 159 gi~~~~~i~iGD~~nDi~~a~~aG~~~~~~~~---~~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 159 GVAPSESIGLEDSQAGIQAIKDSGALPIGVGR---PEDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp TCCGGGEEEEESSHHHHHHHHHHTCEEEEESC---HHHHC-SSSEEESSGGGCC
T ss_pred CCChhHeEEEeCCHHHHHHHHHCCCEEEEECC---HHHhc-cccchhcCHHhCC
Confidence 99999999999999999999999999999976 23344 7899999998874
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-29 Score=203.69 Aligned_cols=205 Identities=17% Similarity=0.210 Sum_probs=163.1
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhC------------CCH----HHHHHHHHHHhCC
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG------------KTP----LEEAAIIVEDYGL 68 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------~~~----~~~~~~~~~~~~~ 68 (287)
+++++|+|+||+||||+++...+...+.++++++|............+ ... ...+..+...++.
T Consensus 2 ~~~~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (240)
T 3smv_A 2 QLTDFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGL 81 (240)
T ss_dssp CGGGCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTC
T ss_pred CCccceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCC
Confidence 455689999999999999999898999999999999887665533222 111 2334455566665
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCC
Q 023109 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (287)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~k 148 (287)
+.... ....+........++|++.++|+.+++ |++++++||++...+...+ +. +..+|+.++++++.+..|
T Consensus 82 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l-~~--l~~~fd~i~~~~~~~~~K 152 (240)
T 3smv_A 82 EPDAA-----EREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSN-AK--LGVEFDHIITAQDVGSYK 152 (240)
T ss_dssp CCCHH-----HHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHH-TT--TCSCCSEEEEHHHHTSCT
T ss_pred CCCHH-----HHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHH-Hh--cCCccCEEEEccccCCCC
Confidence 53322 223344555677899999999999999 7999999999999888888 55 557899999999999999
Q ss_pred CCHHHHHHH---HHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCC------C-c-cccccCCcEEeCCccCcCc
Q 023109 149 PSPDIFLEA---AKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP------K-Q-THRYTAADEVINSLLDLRP 216 (287)
Q Consensus 149 p~~~~~~~~---~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~------~-~-~~~~~~a~~v~~~l~el~~ 216 (287)
|+|+.|..+ ++.+|++|++|++|||+. +|+.+|+++|+.+++++++. . . ......++++++++.++..
T Consensus 153 P~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~ 232 (240)
T 3smv_A 153 PNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAE 232 (240)
T ss_dssp TSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CCCSSCCCCSEEESSHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHH
Confidence 999999999 899999999999999997 99999999999999998751 1 1 2235788999999999866
Q ss_pred cc
Q 023109 217 EK 218 (287)
Q Consensus 217 ~~ 218 (287)
.+
T Consensus 233 ~l 234 (240)
T 3smv_A 233 AH 234 (240)
T ss_dssp HH
T ss_pred HH
Confidence 54
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=205.68 Aligned_cols=209 Identities=19% Similarity=0.247 Sum_probs=164.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHH-cCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCC-----HHHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA-----KHEFVNEVYS 81 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 81 (287)
++|+|+||+||||+|++..+...+.+++++ +|.... .......|+.....+..++..++.+.. ...+...+..
T Consensus 3 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 2hcf_A 3 SRTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGS-TGSHDFSGKMDGAIIYEVLSNVGLERAEIADKFDKAKETYIA 81 (234)
T ss_dssp CCEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCC-C---CCTTCCHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEcCCCCcccCccchHHHHHHHHHHHhCCCCc-cchhhhcCCChHHHHHHHHHHcCCCcccchhHHHHHHHHHHH
Confidence 479999999999999988888888888888 687765 445566788777767777777765422 1223333333
Q ss_pred HHHhhh--ccCCCCCcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC-CCCCCHHHHHHH
Q 023109 82 MFSDHL--CKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEA 157 (287)
Q Consensus 82 ~~~~~~--~~~~~~~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~-~~kp~~~~~~~~ 157 (287)
.+.+.. ....+.||+.++|+.++++ |++++++|+++...++..+ +.+|+..+|+.++++++.. ..||.+..+.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~k~~~~~~~~~ 160 (234)
T 2hcf_A 82 LFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALERA 160 (234)
T ss_dssp HHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHHH
T ss_pred HHHHHhccCCCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHH-HHCCchhhcCcceecCCCcCccchHHHHHHHH
Confidence 333322 3467889999999999999 9999999999999998888 8889999999877776654 456888999999
Q ss_pred HHHcC--CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCccc
Q 023109 158 AKRLN--MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 158 ~~~l~--~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~~ 218 (287)
++.+| ++|++|++|||+.+|+.+|+++|+.++++.++...... ...++++++++.++...+
T Consensus 161 ~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 161 RRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp HHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred HHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCCCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 99999 99999999999999999999999999999886544333 234899999999986554
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=195.49 Aligned_cols=200 Identities=18% Similarity=0.247 Sum_probs=165.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||+++...+...+.++++++|........+...+ .+....+..+......+ ......+...+.+.
T Consensus 3 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 79 (207)
T 2go7_A 3 QKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD---VEVLNQVRAQSLAE 79 (207)
T ss_dssp -CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC---HHHHHHHHHHHHTT
T ss_pred cccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhchhhcc---HHHHHHHHHHHHHh
Confidence 479999999999999998888889999999998887777777777 76666665554333321 33334444444443
Q ss_pred h-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 87 ~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
. ....+.|++.++++.+++.|++++++|++...... .+ +.+++..+|+.++++++.+..||+++.+..+++.+|++|
T Consensus 80 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~i~~ 157 (207)
T 2go7_A 80 KNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-IL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNS 157 (207)
T ss_dssp CGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCG
T ss_pred ccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HH-HHcCchhheeeEEecCcCCCCCCCcHHHHHHHHHhCCCc
Confidence 3 46778999999999999999999999999988888 77 788999999999999988899999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
+++++|||+.||+++++.+|+.++++.++. . .++++++++.++...+
T Consensus 158 ~~~~~iGD~~nDi~~~~~aG~~~i~~~~~~-~-----~a~~v~~~~~el~~~l 204 (207)
T 2go7_A 158 DNTYYIGDRTLDVEFAQNSGIQSINFLEST-Y-----EGNHRIQALADISRIF 204 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEESSCCS-C-----TTEEECSSTTHHHHHT
T ss_pred ccEEEECCCHHHHHHHHHCCCeEEEEecCC-C-----CCCEEeCCHHHHHHHH
Confidence 999999999999999999999999988754 2 6899999999875543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-28 Score=196.02 Aligned_cols=210 Identities=22% Similarity=0.261 Sum_probs=163.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||+++...+...+.++++++|.. .....+....+.........+..... ......+...+...+...
T Consensus 5 ~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 83 (225)
T 3d6j_A 5 KYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSILTGITD-ADQLESFRQEYSKEADIY 83 (225)
T ss_dssp CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHHcCCCC-HHHHHHHHHHHHHHHHHh
Confidence 4799999999999999988888899999999886 45556666677776655554432110 001122233333333333
Q ss_pred h-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 87 ~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
. ....+.|++.++++.+++.|++++++|+.+...++..+ +.+++..+|+.++++++....||++..+..+++.+|+++
T Consensus 84 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~ 162 (225)
T 3d6j_A 84 MNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFL-RNHMPDDWFDIIIGGEDVTHHKPDPEGLLLAIDRLKACP 162 (225)
T ss_dssp TGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HTSSCTTCCSEEECGGGCSSCTTSTHHHHHHHHHTTCCG
T ss_pred ccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHcCchhheeeeeehhhcCCCCCChHHHHHHHHHhCCCh
Confidence 2 35677899999999999999999999999998888888 888999999999999888899999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcc-cccc-CCcEEeCCccCcCcccc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYT-AADEVINSLLDLRPEKW 219 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~-~~~~-~a~~v~~~l~el~~~~~ 219 (287)
+++++|||+.||+++++.+|+.++++..+.... .... .++++++++.++...+.
T Consensus 163 ~~~i~iGD~~nDi~~~~~aG~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l~ 218 (225)
T 3d6j_A 163 EEVLYIGDSTVDAGTAAAAGVSFTGVTSGMTTAQEFQAYPYDRIISTLGQLISVPE 218 (225)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEETTSSCCTTGGGGSCCSEEESSGGGGC----
T ss_pred HHeEEEcCCHHHHHHHHHCCCeEEEECCCCCChHHHhhcCCCEEECCHHHHHHhhh
Confidence 999999999999999999999999998864433 3333 48999999999976654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=202.20 Aligned_cols=211 Identities=16% Similarity=0.208 Sum_probs=161.8
Q ss_pred CccccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHH-HHhCCC--------------------HHHHHH
Q 023109 2 AQPLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKT--------------------PLEEAA 60 (287)
Q Consensus 2 ~~~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~--------------------~~~~~~ 60 (287)
++|.++++|+|+||+||||+++...+...+.++++++|......... .+.+.. ....+.
T Consensus 8 ~~m~~~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (254)
T 3umg_A 8 SPSTGRNVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLD 87 (254)
T ss_dssp CTTTCSBCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHH
T ss_pred ccCCCCCceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHH
Confidence 44555678999999999999999888899999999999887664432 222210 112233
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeec
Q 023109 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG 140 (287)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~ 140 (287)
.++..++.+ ...+.......+...+...+++|++.++++.+++. ++++++||++...++..+ +.+|+. |+.+++
T Consensus 88 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~--f~~~~~ 161 (254)
T 3umg_A 88 FVLRESGID--PTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMA-KNAGIP--WDVIIG 161 (254)
T ss_dssp HHHHHTTCC--GGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHH-HHHTCC--CSCCCC
T ss_pred HHHHHhCCC--cCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHH-HhCCCC--eeEEEE
Confidence 344444431 00111112223334446678899999999999997 999999999999998888 788885 999999
Q ss_pred cCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC----CCCc-cc--cccCCcEEeCCccC
Q 023109 141 SDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LPKQ-TH--RYTAADEVINSLLD 213 (287)
Q Consensus 141 ~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~----~~~~-~~--~~~~a~~v~~~l~e 213 (287)
++..+..||+|.+|..+++++|++|++|++|||+.+|+.+|+++|+.+++++. +... .. ....++++++++.+
T Consensus 162 ~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~e 241 (254)
T 3umg_A 162 SDINRKYKPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDDLAPTGSWDISATDITD 241 (254)
T ss_dssp HHHHTCCTTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSCSSCSSCCSEEESSHHH
T ss_pred cCcCCCCCCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCccccccccCCCceEECCHHH
Confidence 99999999999999999999999999999999999999999999999999984 3222 22 25678999999999
Q ss_pred cCccc
Q 023109 214 LRPEK 218 (287)
Q Consensus 214 l~~~~ 218 (287)
+...+
T Consensus 242 l~~~l 246 (254)
T 3umg_A 242 LAAQL 246 (254)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87654
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-28 Score=199.48 Aligned_cols=206 Identities=23% Similarity=0.384 Sum_probs=168.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-HHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||++++..+...+.++++++|.... ........+....+.+..+...++...... ....+.+.+.+.
T Consensus 3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 81 (229)
T 2fdr_A 3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSAS-LLDKSEKLLDMR 81 (229)
T ss_dssp CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTH-HHHHHHHHHHHH
T ss_pred CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcCCCCCHH-HHHHHHHHHHHH
Confidence 479999999999999998888889999999998877 455567778888888888877776553322 223333434333
Q ss_pred h-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcCCC--CCCHHHHHHHHHHcC
Q 023109 87 L-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTG--KPSPDIFLEAAKRLN 162 (287)
Q Consensus 87 ~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~~~--kp~~~~~~~~~~~l~ 162 (287)
. ....+.|++.++++.++. +++++|+++...++..+ +.+++..+| +.+++++..+.. ||+|..+.++++.+|
T Consensus 82 ~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l-~~~~l~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~l~ 157 (229)
T 2fdr_A 82 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFG 157 (229)
T ss_dssp HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHT
T ss_pred hhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHH-HhCChHHhccceEEeccccccCCCCcCHHHHHHHHHHcC
Confidence 2 457788999999988864 89999999999888888 888999999 999998888888 999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-----ccccc-CCcEEeCCccCcCccc
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-----THRYT-AADEVINSLLDLRPEK 218 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-----~~~~~-~a~~v~~~l~el~~~~ 218 (287)
++|+++++|||+.+|+++++.+|+.+++++++... ...+. .++++++++.++...+
T Consensus 158 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 158 VSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp CCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 99999999999999999999999999999886542 12333 3899999999986554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.3e-29 Score=203.50 Aligned_cols=200 Identities=23% Similarity=0.224 Sum_probs=158.1
Q ss_pred cCCccEEEEecCCcccccHHHHHHHH-HHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVL-KTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
|+++|+|+||+||||+++...+...+ .++++++|... .......+......+...... ........+...+.
T Consensus 22 m~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~--~~~~~~~g~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 94 (231)
T 3kzx_A 22 MKQPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKN--IDLDSIPNSTIPKYLITLLGK-----RWKEATILYENSLE 94 (231)
T ss_dssp CCCCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCC--CCCTTSCTTTHHHHHHHHHGG-----GHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCH--HHHHHHhCccHHHHHHHHhCc-----hHHHHHHHHHHHHh
Confidence 45689999999999999987777777 88899888765 222344455544444433221 23334444444444
Q ss_pred --hhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 85 --DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 85 --~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
.......+.|++.++++.++++|++++++||++...++..+ +.+|+..+|+.++++++.+..||+|+.+..+++.+|
T Consensus 95 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lg 173 (231)
T 3kzx_A 95 KSQKSDNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEI-HHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNIN 173 (231)
T ss_dssp HCCSCCCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHT
T ss_pred hhcccccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHH-HHCCchhheeeEEcccccCCCCCChHHHHHHHHHcC
Confidence 12246788999999999999999999999999999999899 889999999999999999999999999999999999
Q ss_pred CCCC-cEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 163 MEPS-SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 163 ~~~~-~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
++|+ ++++|||+.+|+.+|+++|+.++++..+.. ..++++++++.++...+
T Consensus 174 i~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~~-----~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 174 IEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTNI-----IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp CCCSTTEEEEESSHHHHHHHHHTTCEEEEECC----------CCEEESSHHHHHHHH
T ss_pred CCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCCC-----CCCceeeCCHHHHHHHH
Confidence 9999 999999999999999999999999966332 45688999998886554
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.8e-28 Score=200.77 Aligned_cols=207 Identities=18% Similarity=0.214 Sum_probs=157.7
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcC---CCCCHHHHHHHh--C-----CCHHHHHHHHHHHh-CCCCCHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYG---KEWDGREKHKIV--G-----KTPLEEAAIIVEDY-GLPCAKHEFVN 77 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~-~~~~~~~~~~~ 77 (287)
+|+|+||+||||+|+...+...+.+++++++ ............ + ......+..++..+ +.+. .. ...
T Consensus 2 ~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~ 79 (241)
T 2hoq_A 2 VKVIFFDLDDTLVDTSKLAEIARKNAIENMIRHGLPVDFETAYSELIELIKEYGSNFPYHFDYLLRRLDLPYN-PK-WIS 79 (241)
T ss_dssp CCEEEECSBTTTBCHHHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHHHHHCTTCTTHHHHHHHHTTCCCC-HH-HHH
T ss_pred ccEEEEcCCCCCCCChhhHHHHHHHHHHHHHHccccccHHHHHHHHHHhhcccchhHHHHHHHHHHHhcCCcc-ch-HHH
Confidence 7899999999999999888888888887763 343433221111 1 01112234444544 4332 11 122
Q ss_pred HHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHH
Q 023109 78 EVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (287)
Q Consensus 78 ~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~ 156 (287)
.+.+.+.+.. ....++||+.++|+.++++|++++++||++...++..+ +.+|+..+|+.++++++.+..||+|+.|.+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~ 158 (241)
T 2hoq_A 80 AGVIAYHNTKFAYLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKI-LRLELDDFFEHVIISDFEGVKKPHPKIFKK 158 (241)
T ss_dssp HHHHHHHHHHHHHCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHH-HHcCcHhhccEEEEeCCCCCCCCCHHHHHH
Confidence 3333343332 35678999999999999999999999999999888888 888999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccc---cCCcEEeCCccCcCccc
Q 023109 157 AAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRY---TAADEVINSLLDLRPEK 218 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~---~~a~~v~~~l~el~~~~ 218 (287)
+++.+|++|++|++|||+. +|+.+|+++|+.++++..+....... ..++++++++.++...+
T Consensus 159 ~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 159 ALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYGKHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp HHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred HHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEECCCCCCcccccccCCCCEEECCHHHHHHHH
Confidence 9999999999999999998 99999999999999997755433322 37899999999987654
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-28 Score=200.95 Aligned_cols=207 Identities=18% Similarity=0.224 Sum_probs=154.6
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH---------HHHHHHhCCC------HHHHHHHHHHHhCCCC
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIVGKT------PLEEAAIIVEDYGLPC 70 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~~~~------~~~~~~~~~~~~~~~~ 70 (287)
|+++|+|+||+||||++++..+..+...+ ...+..... .......+.. ....+..++..++.+.
T Consensus 2 M~~~k~i~fDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3um9_A 2 MHAIKAVVFDLYGTLYDVYSVRTSCERIF-PGQGEMVSKMWRQKQLEYTWMRTLMGQYQDFESATLDALRYTCGSLGLAL 80 (230)
T ss_dssp CSSCCEEEECSBTTTBCGGGGHHHHHHHS-TTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCceEEEEcCCCCcCcchHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHcCCCC
Confidence 45689999999999999876554433221 111000000 0001111111 1333445566666553
Q ss_pred CHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCC
Q 023109 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPS 150 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~ 150 (287)
..... +.+...+...++.|++.++++.+++.|++++++||++...++..+ +.+|+..+|+.++++++.+..||+
T Consensus 81 ~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~kp~ 154 (230)
T 3um9_A 81 DADGE-----AHLCSEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVV-GNSGLTNSFDHLISVDEVRLFKPH 154 (230)
T ss_dssp CHHHH-----HHHHHHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEGGGTTCCTTC
T ss_pred CHHHH-----HHHHHHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HHCCChhhcceeEehhhcccCCCC
Confidence 33222 223333467788999999999999999999999999999999888 888999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcc-ccccCCcEEeCCccCcCcccc
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQT-HRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~-~~~~~a~~v~~~l~el~~~~~ 219 (287)
+..+..+++.+|++|++|++|||+.+|+.+++++|+.+++++++.... .....++++++++.++...+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~ 224 (230)
T 3um9_A 155 QKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVFDQLGVVPDIVVSDVGVLASRFS 224 (230)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCCCCSSCCCSEEESSHHHHHHTCC
T ss_pred hHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCccccccCCCcEEeCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999864433 345688999999999876654
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=6.9e-28 Score=200.94 Aligned_cols=212 Identities=19% Similarity=0.272 Sum_probs=154.5
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHHHHHHH----cCCCCCHHH-----HHHHhC-------CCHHHH----HHHHH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVK----YGKEWDGRE-----KHKIVG-------KTPLEE----AAIIV 63 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~----~g~~~~~~~-----~~~~~~-------~~~~~~----~~~~~ 63 (287)
|..+++|+|+||+||||+|+...+..+++++++. +|....... .....+ .+.... +...+
T Consensus 13 ~~~~~~k~viFDlDGTLvds~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (260)
T 2gfh_A 13 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAI 92 (260)
T ss_dssp EECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHH
T ss_pred cccccceEEEEcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHH
Confidence 4456799999999999999998888888887764 454432111 111222 121111 11122
Q ss_pred HH-hCCCCCHHHHHHHHHHHHHh-hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc
Q 023109 64 ED-YGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 64 ~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~ 141 (287)
.. .+.. ........+.+.+.. .....+++||+.++|+.|++ +++++++||++...+...+ +++|+..+|+.++++
T Consensus 93 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l-~~~gl~~~f~~i~~~ 169 (260)
T 2gfh_A 93 QETKGGA-DNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIG 169 (260)
T ss_dssp HHHHCSS-CCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEG
T ss_pred HHhcCcc-chHHHHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHH-HhcCHHhhhheEEec
Confidence 11 1211 112222223233322 23467899999999999988 5999999999999998888 888999999999999
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCC-eEEEECCCCCc-cccccCCcEEeCCccCcCccc
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGM-EVVAVPSLPKQ-THRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs-~~Dv~~a~~aG~-~~i~v~~~~~~-~~~~~~a~~v~~~l~el~~~~ 218 (287)
++.+..||+|+.|..+++.+|++|++|+||||+ .+|+.+|+++|+ .++++..+... ......++++++++.++...+
T Consensus 170 ~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~l 249 (260)
T 2gfh_A 170 GEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 249 (260)
T ss_dssp GGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcCCCCCcCcccCCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999996 899999999999 79998765333 223457899999999986544
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=203.04 Aligned_cols=211 Identities=18% Similarity=0.226 Sum_probs=164.0
Q ss_pred CCccEEEEecCCcccccHH-HHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHH----------HHhCCCCCHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDG-MFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAKHEF 75 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~ 75 (287)
+++|+|+||+||||++++. .+...+.++++++|............|.........+. ..++.......+
T Consensus 4 m~ik~i~fDlDGTLld~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (267)
T 1swv_A 4 MKIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADI 83 (267)
T ss_dssp -CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHH
T ss_pred CCceEEEEecCCCEEeCCCccHHHHHHHHHHHcCCCCCHHHHHHHhccchHHHHHHhcccHHHHHHHHHHhCCCCCHHHH
Confidence 3589999999999999877 56788889999999888777776777776554443322 233433333322
Q ss_pred ---HHHHHHHHHhh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcCCCCCC
Q 023109 76 ---VNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPS 150 (287)
Q Consensus 76 ---~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~~~kp~ 150 (287)
...+...+... .....+.|++.++++.+++.|++++++|+.+...+...+ +.+|+..+| +.+++++.....||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~kp~ 162 (267)
T 1swv_A 84 QEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPY 162 (267)
T ss_dssp HHHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTS
T ss_pred HHHHHHHHHHHHHhhccccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHH-HHcCCcccChHheecCCccCCCCCC
Confidence 22222222222 235678899999999999999999999999988888888 777777775 889998888999999
Q ss_pred HHHHHHHHHHcCCCC-CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc------------------------ccc-ccCC
Q 023109 151 PDIFLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THR-YTAA 204 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~-~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~------------------------~~~-~~~a 204 (287)
|+.+..+++.+|+++ ++|++|||+.||+.+++.+|+.++++.++... ... ...|
T Consensus 163 ~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 242 (267)
T 1swv_A 163 PWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGA 242 (267)
T ss_dssp SHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCC
Confidence 999999999999999 99999999999999999999999999987542 122 3458
Q ss_pred cEEeCCccCcCccc
Q 023109 205 DEVINSLLDLRPEK 218 (287)
Q Consensus 205 ~~v~~~l~el~~~~ 218 (287)
+++++++.++...+
T Consensus 243 d~v~~~~~el~~~l 256 (267)
T 1swv_A 243 HFTIETMQELESVM 256 (267)
T ss_dssp SEEESSGGGHHHHH
T ss_pred ceeccCHHHHHHHH
Confidence 99999999986654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-28 Score=199.46 Aligned_cols=206 Identities=15% Similarity=0.217 Sum_probs=153.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH---------HHHHHHh----CC--C----HHHHHHHHHHHhC
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG---------REKHKIV----GK--T----PLEEAAIIVEDYG 67 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~---------~~~~~~~----~~--~----~~~~~~~~~~~~~ 67 (287)
+++|+|+||+||||+++...+..+. +.+...+..... ....... +. . ....+......++
T Consensus 2 ~~~k~i~FDlDGTL~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (233)
T 3umb_A 2 TSIRAVVFDAYGTLFDVYSVAARAE-QLFPGKGEALSVLWRDRQIDYTRIRSLAGPSGEHYKPFWDVTVDALRYACARLN 80 (233)
T ss_dssp CCCCEEEECSBTTTEETHHHHHHHH-HHSTTCHHHHHHHHHHHHHHHHHHHHHHCTTSTTCCCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEeCCCcccccHHHHHHHH-HHhccchhhhhHHHHhhhhHHHHHHHhcccccCCCCCHHHHHHHHHHHHHHHcC
Confidence 4689999999999999976554433 222111111000 0000111 11 1 1233344556666
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCC
Q 023109 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (287)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~ 147 (287)
.+...+.. ..+ .+.+....++|++.++++.++++|++++++||++...++..+ +.+|+..+|+.++++++.+..
T Consensus 81 ~~~~~~~~-~~~----~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~ 154 (233)
T 3umb_A 81 LPLGNHAE-ATL----MREYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAV-KSAGMSGLFDHVLSVDAVRLY 154 (233)
T ss_dssp CCCCHHHH-HHH----HHHHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHH-HTTTCTTTCSEEEEGGGTTCC
T ss_pred CCCCHHHH-HHH----HHHHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHH-HHCCcHhhcCEEEEecccCCC
Confidence 65433322 222 222346788999999999999999999999999999999889 889999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-cccccCCcEEeCCccCcCcccc
Q 023109 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 148 kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~~~~a~~v~~~l~el~~~~~ 219 (287)
||+|+.+..+++.+|++|++|++|||+.+|+.+|+++|+.+++++++... +.....++++++++.++...+.
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~~~~~~~~v~~~~~el~~~l~ 227 (233)
T 3umb_A 155 KTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEALDVAPAAAGHDMRDLLQFVQ 227 (233)
T ss_dssp TTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCSSSCCCSEEESSHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchhccCCCCEEECCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999885443 3446778999999999876654
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-28 Score=203.00 Aligned_cols=208 Identities=22% Similarity=0.235 Sum_probs=165.5
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHH------------------hCCCHHHH----HHHHHHHh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------------VGKTPLEE----AAIIVEDY 66 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~~~~~~~----~~~~~~~~ 66 (287)
+|+|+||+||||+++...+...+.++++++|........... .|...... +...+...
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (263)
T 3k1z_A 1 MRLLTWDVKDTLLRLRHPLGEAYATKARAHGLEVEPSALEQGFRQAYRAQSHSFPNYGLSHGLTSRQWWLDVVLQTFHLA 80 (263)
T ss_dssp CCEEEECCBTTTEEESSCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHSTGGGGGGTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEcCCCceeCCCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhhhhccccccccCCCHHHHHHHHHHHHHHHc
Confidence 589999999999998777778888999999998776554322 24444333 33444444
Q ss_pred CCCCCHHHHHHHHHHHHHhhhc--cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc
Q 023109 67 GLPCAKHEFVNEVYSMFSDHLC--KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEV 144 (287)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~ 144 (287)
+. .....+.......+..... ..+++||+.++|+.++++|++++++||++.. +...+ +.+|+..+|+.++++++.
T Consensus 81 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~ 157 (263)
T 3k1z_A 81 GV-QDAQAVAPIAEQLYKDFSHPCTWQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGIL-GGLGLREHFDFVLTSEAA 157 (263)
T ss_dssp TC-CCHHHHHHHHHHHHHHTTSGGGEEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHH-HHTTCGGGCSCEEEHHHH
T ss_pred CC-CCHHHHHHHHHHHHHHhcCcccceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHH-HhCCcHHhhhEEEeeccc
Confidence 44 2344454444454544432 4578999999999999999999999998774 57778 889999999999999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccc---cccCCcEEeCCccCcCcccc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH---RYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~---~~~~a~~v~~~l~el~~~~~ 219 (287)
+..||+|+.|..+++.+|++|++|++|||+. +|+.+|+++|+.+++++++..... ....++++++++.++...+.
T Consensus 158 ~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~~~ad~v~~~l~el~~~l~ 236 (263)
T 3k1z_A 158 GWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDSVPKEHILPSLAHLLPALD 236 (263)
T ss_dssp SSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHHSCGGGEESSGGGHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhcccCCCceEeCCHHHHHHHHH
Confidence 9999999999999999999999999999997 999999999999999999654332 23478999999999977654
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-28 Score=197.28 Aligned_cols=192 Identities=19% Similarity=0.211 Sum_probs=148.1
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH-H
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF-S 84 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 84 (287)
++++|+|+||+||||+++...+ ..+++++|............+.... .......+...+ .
T Consensus 3 ~~~~k~iifDlDGTL~d~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~ 63 (205)
T 3m9l_A 3 LSEIKHWVFDMDGTLTIAVHDF----AAIREALSIPAEDDILTHLAALPAD---------------ESAAKHAWLLEHER 63 (205)
T ss_dssp GGGCCEEEECTBTTTEEEEECH----HHHHHHTTCCTTSCHHHHHHHSCHH---------------HHHHHHHHHHHTHH
T ss_pred cccCCEEEEeCCCcCcccHHHH----HHHHHHhCCCchHHHHHHHhcCChH---------------HHHHHHHHHHHHHH
Confidence 4568999999999999985533 3566677776543332222211111 111111222222 2
Q ss_pred hhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 85 ~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
.......+.||+.++++.++++|++++++|+++...++..+ +.+|+..+| +.+++++. ...||+|+.+..+++.+|
T Consensus 64 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~i~~~~~-~~~kp~~~~~~~~~~~~g 141 (205)
T 3m9l_A 64 DLAQGSRPAPGAVELVRELAGRGYRLGILTRNARELAHVTL-EAIGLADCFAEADVLGRDE-APPKPHPGGLLKLAEAWD 141 (205)
T ss_dssp HHEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGSCGGGEECTTT-SCCTTSSHHHHHHHHHTT
T ss_pred HHhhcCCCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHH-HHcCchhhcCcceEEeCCC-CCCCCCHHHHHHHHHHcC
Confidence 22346788999999999999999999999999999999899 889999999 78887766 889999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccccC
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWG 220 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~ 220 (287)
++|++|++|||+.+|+.+|+++|+.++++.++. ...+..++++++++.|+...+.+
T Consensus 142 ~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~--~~~~~~ad~v~~~~~el~~~~~~ 197 (205)
T 3m9l_A 142 VSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPD--NPWPELTDWHARDCAQLRDLLSA 197 (205)
T ss_dssp CCGGGEEEEESSHHHHHHHHHHTCEEEECSSSS--CSCGGGCSEECSSHHHHHHHHHH
T ss_pred CCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCC--CcccccCCEEeCCHHHHHHHHHh
Confidence 999999999999999999999999999998854 34456799999999999776543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.4e-28 Score=198.96 Aligned_cols=205 Identities=17% Similarity=0.249 Sum_probs=158.6
Q ss_pred ccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHH-HHhCCC--------------------HHHHHHHHH
Q 023109 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH-KIVGKT--------------------PLEEAAIIV 63 (287)
Q Consensus 5 ~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~--------------------~~~~~~~~~ 63 (287)
..|++|+|+||+||||+++...+...+.++++++|......... .+.+.. ....+..++
T Consensus 18 ~~m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (254)
T 3umc_A 18 YFQGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALA 97 (254)
T ss_dssp CSSSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHH
T ss_pred cccCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHH
Confidence 34568999999999999999888899999999999887654331 111110 112233344
Q ss_pred HHhCCCCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC
Q 023109 64 EDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE 143 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~ 143 (287)
..++........ ..+...+....++|++.++++.+++. ++++++||.+...+...+ +.+|+. |+.+++++.
T Consensus 98 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~g~~--f~~~~~~~~ 168 (254)
T 3umc_A 98 GEFGLALDEALL-----QRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVA-RHAGLP--WDMLLCADL 168 (254)
T ss_dssp HHTTCCCCHHHH-----HHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHH-HHHTCC--CSEECCHHH
T ss_pred HHhCCCCCHHHH-----HHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHH-HHcCCC--cceEEeecc
Confidence 444443222211 22333445678899999999999986 999999999999888888 778885 999999999
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC----CC-Ccccc--ccCCcEEeCCccCcCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS----LP-KQTHR--YTAADEVINSLLDLRP 216 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~----~~-~~~~~--~~~a~~v~~~l~el~~ 216 (287)
.+..||+|++|+.+++.+|++|++|++|||+.+|+.+|+.+|+.+++++. +. ..+.. ...|+++++++.++..
T Consensus 169 ~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~ 248 (254)
T 3umc_A 169 FGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHR 248 (254)
T ss_dssp HTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHH
T ss_pred cccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccccCCCCcEEECCHHHHHH
Confidence 99999999999999999999999999999999999999999999999993 32 22233 5678999999999865
Q ss_pred cc
Q 023109 217 EK 218 (287)
Q Consensus 217 ~~ 218 (287)
.+
T Consensus 249 ~l 250 (254)
T 3umc_A 249 QL 250 (254)
T ss_dssp HH
T ss_pred Hh
Confidence 54
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=99.96 E-value=5.9e-28 Score=201.43 Aligned_cols=125 Identities=12% Similarity=0.081 Sum_probs=109.5
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh---cCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ---HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~---~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
...+++||+.++|+.|+++|++++++||++...++..+ ++ .|+..+|+.++++ +++ .||+|+.|.++++++|++
T Consensus 127 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l-~~~~~~~l~~~fd~i~~~-~~~-~KP~p~~~~~~~~~lg~~ 203 (261)
T 1yns_A 127 MKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDT-KIG-HKVESESYRKIADSIGCS 203 (261)
T ss_dssp CCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECG-GGC-CTTCHHHHHHHHHHHTSC
T ss_pred cccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHH-HhhcccChHhhccEEEec-CCC-CCCCHHHHHHHHHHhCcC
Confidence 45789999999999999999999999999999888888 64 4699999999988 788 999999999999999999
Q ss_pred CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc--cccCCcEEeCCccCcC
Q 023109 165 PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLR 215 (287)
Q Consensus 165 ~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~--~~~~a~~v~~~l~el~ 215 (287)
|++|+||||+.+|+.+|+++|+.++++..+..... ....++++++++.++.
T Consensus 204 p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~i~~l~el~ 256 (261)
T 1yns_A 204 TNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSELY 256 (261)
T ss_dssp GGGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGCB
T ss_pred cccEEEEcCCHHHHHHHHHCCCEEEEEeCCCCCcccccccCCCEEECCHHHhC
Confidence 99999999999999999999999999977433221 2345789999998873
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-27 Score=192.76 Aligned_cols=205 Identities=16% Similarity=0.239 Sum_probs=148.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC---------CHHHHHHHhCC--C----HHHHHHHHHHHhCCCCC
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW---------DGREKHKIVGK--T----PLEEAAIIVEDYGLPCA 71 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~---------~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~ 71 (287)
|++|+|+||+||||+|++..+..++..+ ...+... .........+. . ....+...+..++.+..
T Consensus 12 M~~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (240)
T 2no4_A 12 DSLRACVFDAYGTLLDVHSAVMRNADEV-GASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDR 90 (240)
T ss_dssp SCCCEEEECCBTTTBCTTHHHHTTHHHH-CTTHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHTTCTTH
T ss_pred ccccEEEEeCCCcccccHhHHHHHHHHh-cchhHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 3579999999999999977655433311 0000000 00000011111 0 11122333344443321
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCH
Q 023109 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (287)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~ 151 (287)
.+... .+...+...+++||+.++|+.++++|++++++||++...++..+ +.+|+..+|+.++++++.+..||+|
T Consensus 91 -~~~~~----~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~ 164 (240)
T 2no4_A 91 -KGLKD----RLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAAL-KASKLDRVLDSCLSADDLKIYKPDP 164 (240)
T ss_dssp -HHHHH----HHHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGTTCCTTSH
T ss_pred -HHHHH----HHHHHHhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HhcCcHHHcCEEEEccccCCCCCCH
Confidence 12222 22233346788999999999999999999999999999999888 8889999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCC-cEEeCCccCcCccc
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAA-DEVINSLLDLRPEK 218 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a-~~v~~~l~el~~~~ 218 (287)
+.+..+++.+|++|++|++|||+.+|+.+|+++|+.++++..+...+.....+ +++++++.++...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 165 RIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCCCCCCcccCCCCceeeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999998875533345667 99999999986654
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-27 Score=191.97 Aligned_cols=202 Identities=19% Similarity=0.211 Sum_probs=149.2
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-----------HHHhCCCHHHH----HHHHHHHhCCCCCHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-----------HKIVGKTPLEE----AAIIVEDYGLPCAKH 73 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~~~~ 73 (287)
+|+|+||+||||++++..+...+..+++.+...-..... ....+.+.... ........+.....+
T Consensus 8 ik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (234)
T 3ddh_A 8 IKVIAFDADDTLWSNEPFFQEVEKQYTDLLKPYGTSKEISAALFQTEMNNLQILGYGAKAFTISMVETALQISNGKIAAD 87 (234)
T ss_dssp CCEEEECCBTTTBCCHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHTHHHHCSSHHHHHHHHHHHHHHHTTTCCCHH
T ss_pred ccEEEEeCCCCCccCcchHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhhhhhcCCcchhHHHHHHHHHHHhcCCCCHH
Confidence 899999999999999988877777666554332222222 13344444332 233333344444443
Q ss_pred HHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCH
Q 023109 74 EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151 (287)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g-~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~ 151 (287)
.. ..+.+.+.+.. ....++|++.++++.+++.| ++++++|+++...+...+ +.+++..+|+.++++ .||+|
T Consensus 88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~-----~kpk~ 160 (234)
T 3ddh_A 88 II-RQIVDLGKSLLKMPIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKL-ERSGLSPYFDHIEVM-----SDKTE 160 (234)
T ss_dssp HH-HHHHHHHHHHTTCCCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHH-HHHTCGGGCSEEEEE-----SCCSH
T ss_pred HH-HHHHHHHHHHhhccCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHH-HHhCcHhhhheeeec-----CCCCH
Confidence 33 33444444433 46788999999999999999 999999999998888888 888999999998864 58999
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCC----CCccccccC-CcEEeCCccCcCcc
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSL----PKQTHRYTA-ADEVINSLLDLRPE 217 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~----~~~~~~~~~-a~~v~~~l~el~~~ 217 (287)
+.++++++.+|++|++|++|||+. +|+.+|+++|+.++++..+ ....+.... ++++++++.|+...
T Consensus 161 ~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 161 KEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp HHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred HHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 999999999999999999999997 9999999999999999554 222232344 49999999988653
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-27 Score=190.29 Aligned_cols=204 Identities=16% Similarity=0.241 Sum_probs=148.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC---------HHHHHHHhCC--C----HHHHHHHHHHHhCCCCCH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD---------GREKHKIVGK--T----PLEEAAIIVEDYGLPCAK 72 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~ 72 (287)
++|+|+||+||||+|++..+..++..+ ...+.... ........+. . ....+..++..++.+...
T Consensus 3 m~k~viFDlDGTL~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (232)
T 1zrn_A 3 YIKGIAFDLYGTLFDVHSVVGRCDEAF-PGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATEDALRFTCRHLGLDLDA 81 (232)
T ss_dssp CCCEEEECSBTTTEETHHHHHHHHHHS-TTTHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHTCCCCH
T ss_pred CceEEEEecCCcccCchhhHHHHHHHc-cccHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHcCCCCCH
Confidence 479999999999999987665444311 00000000 0000011111 1 112233344445543322
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHH
Q 023109 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (287)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~ 152 (287)
.. . ..+...+...+++|++.++|+.++++|++++++||++...++..+ +.+|+..+|+.++++++.+..||+|+
T Consensus 82 ~~-~----~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~ 155 (232)
T 1zrn_A 82 RT-R----STLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNR 155 (232)
T ss_dssp HH-H----HHHHHGGGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHH
T ss_pred HH-H----HHHHHHHccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HhcChHhhhheEEEecccCCCCCCHH
Confidence 21 1 223333456788999999999999999999999999999998888 88899999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc-cccccCCcEEeCCccCcCccc
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~~~~a~~v~~~l~el~~~~ 218 (287)
.+.++++.+|++|++|++|||+.+|+.+|+++|+.+++++.+... +.....++++++++.++...+
T Consensus 156 ~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 222 (232)
T 1zrn_A 156 VYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVELF 222 (232)
T ss_dssp HHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHTTC
T ss_pred HHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCccccCCCCCEEECCHHHHHHHH
Confidence 999999999999999999999999999999999999999886443 233567899999999886554
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.6e-27 Score=198.98 Aligned_cols=203 Identities=21% Similarity=0.331 Sum_probs=160.2
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHH-HHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
++|+|+||+||||+++...+...+.++++++|. .... ......|.........+..... .......+...+.+.
T Consensus 34 ~ik~iifDlDGTLlds~~~~~~~~~~~~~~~g~-~~~~~~~~~~~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 108 (275)
T 2qlt_A 34 KINAALFDVDGTIIISQPAIAAFWRDFGKDKPY-FDAEHVIHISHGWRTYDAIAKFAPDFA----DEEYVNKLEGEIPEK 108 (275)
T ss_dssp EESEEEECCBTTTEECHHHHHHHHHHHHTTCTT-CCHHHHHHHCTTCCHHHHHHHHCGGGC----CHHHHHHHHHTHHHH
T ss_pred cCCEEEECCCCCCCCCHHHHHHHHHHHHHHcCC-CCHHHHHHHhcCCCHHHHHHHHhccCC----cHHHHHHHHHHHHHH
Confidence 379999999999999998888888888888874 3332 3345567776665554433211 122333333333333
Q ss_pred h-ccCCCCCcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC-
Q 023109 87 L-CKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM- 163 (287)
Q Consensus 87 ~-~~~~~~~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~- 163 (287)
. ....+.||+.++++.+++. |++++++|++....++..+ +.+++. .|+.++++++....||+|+.+..+++.+|+
T Consensus 109 ~~~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l-~~~~l~-~f~~i~~~~~~~~~kp~~~~~~~~~~~lgi~ 186 (275)
T 2qlt_A 109 YGEHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWF-DILKIK-RPEYFITANDVKQGKPHPEPYLKGRNGLGFP 186 (275)
T ss_dssp HCTTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHH-HHHTCC-CCSSEECGGGCSSCTTSSHHHHHHHHHTTCC
T ss_pred HhcCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHH-HHcCCC-ccCEEEEcccCCCCCCChHHHHHHHHHcCCC
Confidence 2 4567889999999999999 9999999999999888888 777876 489999999889999999999999999999
Q ss_pred ------CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccc-cCCcEEeCCccCcCcc
Q 023109 164 ------EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY-TAADEVINSLLDLRPE 217 (287)
Q Consensus 164 ------~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~-~~a~~v~~~l~el~~~ 217 (287)
+|++|++|||+.||+++++++|+.++++..+....+.. ..++++++++.++...
T Consensus 187 ~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~~~~~~~~~~~~~ad~v~~~~~el~~~ 247 (275)
T 2qlt_A 187 INEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIATTFDLDFLKEKGCDIIVKNHESIRVG 247 (275)
T ss_dssp CCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEESSSSCHHHHTTSSCSEEESSGGGEEEC
T ss_pred ccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHcChh
Confidence 99999999999999999999999999999876544443 4689999999988543
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.5e-28 Score=199.57 Aligned_cols=205 Identities=19% Similarity=0.204 Sum_probs=152.6
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHH---HcCCCCCH----------HHHHHHhCCCH-------HHHHHHHHHHhCC
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLV---KYGKEWDG----------REKHKIVGKTP-------LEEAAIIVEDYGL 68 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~---~~g~~~~~----------~~~~~~~~~~~-------~~~~~~~~~~~~~ 68 (287)
+|+|+||+||||++++..+......+.+ +.|..... .......+... ...+..+...++.
T Consensus 2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (234)
T 3u26_A 2 IRAVFFDSLGTLNSVEGAAKSHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPLRDILEEVMRKLAEKYGF 81 (234)
T ss_dssp CCEEEECSTTTTBCHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEcCCCccccccchhHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHHHHHHcCc
Confidence 7999999999999998654444433433 34443210 11112222221 1133344444443
Q ss_pred CCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCC
Q 023109 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGK 148 (287)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~k 148 (287)
... ..+... ..........++|++.++++.+++. ++++++||++...+...+ +.+|+..+|+.++++++.+..|
T Consensus 82 ~~~-~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~k 155 (234)
T 3u26_A 82 KYP-ENFWEI---SLRMSQRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFL-DALGIKDLFDSITTSEEAGFFK 155 (234)
T ss_dssp CCC-TTHHHH---HHHHHHHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEHHHHTBCT
T ss_pred hHH-HHHHHH---HHHHHHhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHH-HHcCcHHHcceeEeccccCCCC
Confidence 211 111111 1112223567889999999999999 999999999999998888 8899999999999999999999
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcccc
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~ 219 (287)
|+|+.+..+++.+|++|++|++|||+. ||+.+++++|+.+++++++....+....++++++++.++...+.
T Consensus 156 p~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~a~~~~~~~~el~~~l~ 227 (234)
T 3u26_A 156 PHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIVD 227 (234)
T ss_dssp TSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSSTTGGGGGGCSEEESSTHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCCCccccccCCCEeeCCHHHHHHHHH
Confidence 999999999999999999999999998 99999999999999999987666666789999999999876543
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-26 Score=190.86 Aligned_cols=202 Identities=11% Similarity=0.048 Sum_probs=138.6
Q ss_pred CCccEEEEecCCcccccHHH-------HHHHHHHHHHHcCCCCCHH-HHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHH-
Q 023109 7 KLMSCVILDLDGTLLNTDGM-------FSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVN- 77 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~-------~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (287)
+++|+|+||+||||+|++.. ....+..++++.+...... ....+.+.+..+....+...++.......+..
T Consensus 29 ~~ikaviFDlDGTLvDs~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~~~ 108 (253)
T 2g80_A 29 DNYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQL 108 (253)
T ss_dssp CCCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHH
T ss_pred CCCcEEEEcCCCCcccccccchhhHHHHHHHHHHHHHHhcCcHHHHHHHHHhhhccHHHHHHHHHHHHhcccchHHHHHH
Confidence 35899999999999999643 3344455555555543222 22333444565555555554433222111211
Q ss_pred ---HHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc-----------CCccccceeeccCC
Q 023109 78 ---EVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH-----------GWNESFSVIVGSDE 143 (287)
Q Consensus 78 ---~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~-----------gl~~~fd~i~~~~~ 143 (287)
.+...+.......+++||+.++|+. |++++++||++...++..+ ++. ++..+|+.++.+ .
T Consensus 109 ~~~~~~~~~~~~~~~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l-~~~~~g~~~~~~~l~l~~~~~~~f~~-~ 182 (253)
T 2g80_A 109 QGYVWAHGYESGQIKAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLF-GYVQDPNAPAHDSLDLNSYIDGYFDI-N 182 (253)
T ss_dssp HHHHHHHHHHTTSCCBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHH-HSBCCTTCTTSCCBCCGGGCCEEECH-H
T ss_pred HHHHHHHHHHhCcccCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHH-HhhcccccccccccchHhhcceEEee-e
Confidence 2233333323356889999999988 8999999999999988888 655 466667776654 2
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el 214 (287)
+...||+|+.|..+++++|++|++|+||||+.+|+.+|+++|+.++++............++.+++++.++
T Consensus 183 ~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~i~~l~eL 253 (253)
T 2g80_A 183 TSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 253 (253)
T ss_dssp HHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred ccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCCCCcccccCCCccCChhhC
Confidence 31259999999999999999999999999999999999999999999987332221122367888887764
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-26 Score=180.93 Aligned_cols=177 Identities=22% Similarity=0.234 Sum_probs=139.9
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (287)
++|+|+||+||||+|+...+...+.++++++|............+..... .+...... ...+...+.+.+.+..
T Consensus 5 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~~~ 78 (190)
T 2fi1_A 5 KYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF---AIETFAPN---LENFLEKYKENEAREL 78 (190)
T ss_dssp CCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHH---HHHHHCTT---CTTHHHHHHHHHHHHT
T ss_pred cccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHH---HHHHHhhh---HHHHHHHHHHHHHHhc
Confidence 48999999999999999888889999999999887766554433222221 12222221 1222333334444444
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
....+.|++.++++.++++|++++++|+.+. .++..+ +.+++..+|+.++++++....||+|+.+..+++.+|++ +
T Consensus 79 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l-~~~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~--~ 154 (190)
T 2fi1_A 79 EHPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEIL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQIS--S 154 (190)
T ss_dssp TSCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCS--S
T ss_pred CcCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHH-HHcCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCC--e
Confidence 4445899999999999999999999999864 567777 88899999999999999999999999999999999998 9
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
|++|||+.+|+++++.+|+.+++++++
T Consensus 155 ~~~iGD~~~Di~~a~~aG~~~~~~~~~ 181 (190)
T 2fi1_A 155 GLVIGDRPIDIEAGQAAGLDTHLFTSI 181 (190)
T ss_dssp EEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred EEEEcCCHHHHHHHHHcCCeEEEECCC
Confidence 999999999999999999999999874
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.95 E-value=3.9e-26 Score=189.03 Aligned_cols=203 Identities=15% Similarity=0.130 Sum_probs=151.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHH---HcCCCC----CH----HHHH--HHhCCCHHHHHHHHH----HHhCCCC
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLV---KYGKEW----DG----REKH--KIVGKTPLEEAAIIV----EDYGLPC 70 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~---~~g~~~----~~----~~~~--~~~~~~~~~~~~~~~----~~~~~~~ 70 (287)
++|+|+||+||||+|++..+...+.++++ ++|... .. .... ...|.+.......+. ...+...
T Consensus 12 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 91 (251)
T 2pke_A 12 AIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKIFGYGAKGMTLSMIETAIELTEARI 91 (251)
T ss_dssp SCCEEEECCBTTTBCCHHHHHHHHHHHHHHHTTTCCC-----CTTHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHTTTCC
T ss_pred ceeEEEEeCCCCCccCcHhHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhhhhccCcchHHHHHHHHHHHHhcCCCC
Confidence 58999999999999999988888887774 566654 11 1111 356777665554433 2333332
Q ss_pred CHHHHHHHHHHHHHhh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCC
Q 023109 71 AKHEFVNEVYSMFSDH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKP 149 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp 149 (287)
. ......+.+.+.+. .....+.||+.++|+.++ .|++++++|+++...+...+ +.+|+..+|+.++++ .||
T Consensus 92 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~i~~~-----~kp 163 (251)
T 2pke_A 92 E-ARDIQRIVEIGRATLQHPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKI-EQSGLSDLFPRIEVV-----SEK 163 (251)
T ss_dssp C-HHHHHHHHHHHHHHHTCCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHH-HHHSGGGTCCCEEEE-----SCC
T ss_pred C-hHHHHHHHHHHHHHHhccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHH-HHcCcHHhCceeeee-----CCC
Confidence 2 23333444444433 345788999999999999 89999999999998888888 888999999988763 589
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccc-----c-ccCCcE-EeCCccCcCccc
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH-----R-YTAADE-VINSLLDLRPEK 218 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~-----~-~~~a~~-v~~~l~el~~~~ 218 (287)
+|+.+..+++.+|++|++|++|||+. +|+.+++++|+.++++..+..... . ...+++ +++++.++...+
T Consensus 164 ~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 164 DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEECCCC-------------CCTTEEECSSGGGHHHHH
T ss_pred CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEECCCCccccccccccccCCCCeeeeCCHHHHHHHH
Confidence 99999999999999999999999999 999999999999999977543211 1 346787 899999886543
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.94 E-value=7.2e-27 Score=190.48 Aligned_cols=204 Identities=18% Similarity=0.268 Sum_probs=150.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHH---cCCCCC---HHHHH----HHh------CCC----HHHHHHHHHHHhC
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK---YGKEWD---GREKH----KIV------GKT----PLEEAAIIVEDYG 67 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~---~g~~~~---~~~~~----~~~------~~~----~~~~~~~~~~~~~ 67 (287)
|+|+|+||+||||+++...+......+++. .+.... ...+. ... ... ........+...+
T Consensus 1 mik~i~fDlDGTL~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T 3vay_A 1 MIKLVTFDLDDTLWDTAPAIVGAEAALRDWLAEQAPKLGPVPVEHLWEIRSRLLDEDPSFKHRISALRRRVLFHALEDAG 80 (230)
T ss_dssp CCCEEEECCBTTTBCSHHHHHHHHHHHHHHHHHHCTTTCSCCHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHHTTT
T ss_pred CeeEEEecCcccCcCCchHHHHHHHHHHHHHHHhcCcchhhHHHHHHHHHHHHHHhCccccccHHHHHHHHHHHHHHHhC
Confidence 379999999999999987776655554443 333221 11110 000 001 1122333444455
Q ss_pred CCCC-HHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCC
Q 023109 68 LPCA-KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT 146 (287)
Q Consensus 68 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~ 146 (287)
.+.. ...+.....+.+........++||+.++++.+++. ++++++||++.. + +.+|+..+|+.++++++.+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l-~~~~l~~~f~~~~~~~~~~~ 153 (230)
T 3vay_A 81 YDSDEAQQLADESFEVFLHGRHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----V-RRLGLADYFAFALCAEDLGI 153 (230)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----G-GGSTTGGGCSEEEEHHHHTC
T ss_pred CChhhhHHHHHHHHHHHHHhhccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----h-hhcCcHHHeeeeEEccccCC
Confidence 4311 12233344444444456788999999999999998 999999998765 5 77899999999999999999
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
.||+|+.+..+++.+|++|++|++|||+. +|+.+|+++|+.+++++++.........++++++++.++...+
T Consensus 154 ~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 154 GKPDPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp CTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred CCcCHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 99999999999999999999999999998 9999999999999999986654444678899999999987654
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-25 Score=189.78 Aligned_cols=210 Identities=15% Similarity=0.130 Sum_probs=148.1
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHc---CCCCCHHHHHHHhC---CCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVG---KTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (287)
..++|+|+||+||||+++...+......++.++ +............. .........+....+. ....+...+
T Consensus 54 ~~~~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~ 131 (282)
T 3nuq_A 54 NPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKV--NALEYNRLV 131 (282)
T ss_dssp -CCCCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSS--CHHHHHHHH
T ss_pred CCCCCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCC--CHHHHHHHH
Confidence 346799999999999999776666666666543 22333322211110 0001112233333333 233332221
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHHCCC--CEEEEeCCChHHHHHHHHhhcCCccccceeeccCCc----CCCCCCHHH
Q 023109 80 YSMFSDHLCKVKALPGANRLIKHLSCHGV--PMALASNSHRATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDI 153 (287)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~--~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~----~~~kp~~~~ 153 (287)
... ........++||+.++|+.+++.|+ +++++||++...++..+ +.+|+..+|+.+++++.. ...||+|++
T Consensus 132 ~~~-~~~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~v~~~~~~~~~~~~~Kp~~~~ 209 (282)
T 3nuq_A 132 DDS-LPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCL-RLLGIADLFDGLTYCDYSRTDTLVCKPHVKA 209 (282)
T ss_dssp TTT-SCGGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHH-HHHTCTTSCSEEECCCCSSCSSCCCTTSHHH
T ss_pred hhh-hhhhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHH-HhCCcccccceEEEeccCCCcccCCCcCHHH
Confidence 111 1112357889999999999999999 99999999999999888 888999999999987654 567999999
Q ss_pred HHHHHHHcCCCC-CcEEEEeCCHhhHHHHHHcCCe-EEEECCCCCcc--ccccCCcEEeCCccCcCcccc
Q 023109 154 FLEAAKRLNMEP-SSSLVIEDSVIGVVAGKAAGME-VVAVPSLPKQT--HRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 154 ~~~~~~~l~~~~-~~~l~iGDs~~Dv~~a~~aG~~-~i~v~~~~~~~--~~~~~a~~v~~~l~el~~~~~ 219 (287)
|..+++.+|++| ++|++|||+.+|+.+|+++|+. ++++..+.... .....++++++++.++...+.
T Consensus 210 ~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~ad~vi~sl~el~~~l~ 279 (282)
T 3nuq_A 210 FEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVS 279 (282)
T ss_dssp HHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC----CCCCTTCEEESSGGGGGGTSG
T ss_pred HHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccccccCCCCCEEeCCHHHHHHHhh
Confidence 999999999999 9999999999999999999995 55555543332 224578999999999977653
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-25 Score=185.30 Aligned_cols=201 Identities=20% Similarity=0.279 Sum_probs=144.9
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC---------HHHHHHHhCC--C----HHHHHHHHHHHhCCCCCHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD---------GREKHKIVGK--T----PLEEAAIIVEDYGLPCAKH 73 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~---------~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~ 73 (287)
+|+|+||+||||+|++..+..++.. +...+.... ........+. . ..+.+..++..++.+....
T Consensus 2 ~k~viFDlDGTL~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (253)
T 1qq5_A 2 IKAVVFDAYGTLFDVQSVADATERA-YPGRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTREALAYTLGTLGLEPDES 80 (253)
T ss_dssp CCEEEECTBTTTBCTTTTHHHHHHH-STTCHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCCCCHH
T ss_pred CcEEEEeCCCCCCccHhhHHHHHHH-HhhhhhHHHHHHHHhhhHHHHHHHHhcCcCcHHHHHHHHHHHHHHHhCCCCCHH
Confidence 6899999999999997655443331 111100000 0000011111 0 1122333444444332221
Q ss_pred HHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHH
Q 023109 74 EFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~ 153 (287)
. ...+.+.+...+++||+.++|+.++ |++++++||++...++..+ +++|+..+|+.++++++.+..||+|+.
T Consensus 81 ~-----~~~~~~~~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~ 152 (253)
T 1qq5_A 81 F-----LADMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDS 152 (253)
T ss_dssp H-----HHHHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHH
T ss_pred H-----HHHHHHHHhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHH-HHCCchhhccEEEEccccCCCCCCHHH
Confidence 1 1223344456788999999999999 8999999999999999888 888999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC-----------------------CCCc-cccccCCcEEeC
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS-----------------------LPKQ-THRYTAADEVIN 209 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~-----------------------~~~~-~~~~~~a~~v~~ 209 (287)
|.++++.+|++|++|++|||+.+|+.+|+++|+.+++++. +... +.....++++++
T Consensus 153 ~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (253)
T 1qq5_A 153 YALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVP 232 (253)
T ss_dssp HHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEES
T ss_pred HHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECCcccchhhhhcccccccccccccccccccCCCCCCCCeeeC
Confidence 9999999999999999999999999999999999999987 3222 223567899999
Q ss_pred CccCcCccc
Q 023109 210 SLLDLRPEK 218 (287)
Q Consensus 210 ~l~el~~~~ 218 (287)
++.++...+
T Consensus 233 ~~~el~~~l 241 (253)
T 1qq5_A 233 ALGDLPRLV 241 (253)
T ss_dssp SGGGHHHHH
T ss_pred CHHHHHHHH
Confidence 999987654
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-27 Score=188.68 Aligned_cols=194 Identities=18% Similarity=0.222 Sum_probs=138.1
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH-HHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (287)
+|+|+||+||||+|+...+.. +......++..... ..+....+ .....+..++..++ . . .....+. +.+
T Consensus 1 ik~iiFDlDGTL~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~--~-~~~~~~~----~~~ 70 (201)
T 2w43_A 1 MIILAFDIFGTVLDTSTVIQE-FRNKQLEYTWLLTIMGKYVEFEE-ITKITLRYILKVRG-E--E-SKFDEEL----NKW 70 (201)
T ss_dssp CCEEEECCBTTTEEGGGSCHH-HHHHHHHHHHHHHHHTCCCCHHH-HHHHHHHHHHHHTT-C--G-GGHHHHH----HHH
T ss_pred CcEEEEeCCCceecchhHHHH-HHHHHHHHHHHHHHccCcccHHH-HHHHHHHHHHHHhC-C--h-HHHHHHH----Hhh
Confidence 478999999999998764433 22222111100000 00000000 01122333444443 1 1 1112222 223
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
...+++||+.+ |+.++++ ++++++||++...++..+ +++|+..+|+.++++++.+..||+|+.+.++++.+| |++
T Consensus 71 ~~~~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~--~~~ 145 (201)
T 2w43_A 71 KNLKAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHL-ERNGLLRYFKGIFSAESVKEYKPSPKVYKYFLDSIG--AKE 145 (201)
T ss_dssp HTCEECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHT--CSC
T ss_pred cccccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHH-HHCCcHHhCcEEEehhhcCCCCCCHHHHHHHHHhcC--CCc
Confidence 35788999999 9999999 999999999999898888 889999999999999999999999999999999999 999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCCCc-cccccCCcEEeCCccCcCcc
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ-THRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~-~~~~~~a~~v~~~l~el~~~ 217 (287)
|++|||+.+|+.+|+++|+.+++++.+... +.....++++++++.++...
T Consensus 146 ~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 146 AFLVSSNAFDVIGAKNAGMRSIFVNRKNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp CEEEESCHHHHHHHHHTTCEEEEECSSSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred EEEEeCCHHHhHHHHHCCCEEEEECCCCCCccccCCCCCEEECCHHHHHHH
Confidence 999999999999999999999999885433 23355789999999887544
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-26 Score=184.47 Aligned_cols=182 Identities=20% Similarity=0.192 Sum_probs=138.0
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHh----------C-CCHHHHHHHHHHHhCCCCCH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV----------G-KTPLEEAAIIVEDYGLPCAK 72 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~ 72 (287)
|+++++|+|+||+||||++++. ..+.+.++++|..........+. + .+..+....+...++.+...
T Consensus 23 M~~~~ik~viFD~DGTL~d~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 99 (229)
T 4dcc_A 23 MKSKGIKNLLIDLGGVLINLDR---ERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMMGKMVSD 99 (229)
T ss_dssp ---CCCCEEEECSBTTTBCBCH---HHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHHTSCCCH
T ss_pred cccCCCCEEEEeCCCeEEeCCh---HHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHhCCCCCH
Confidence 3445689999999999999864 34456667778764443332221 2 24455555666666655554
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHH-----hhcCCccccceeeccCCcCCC
Q 023109 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKIS-----YQHGWNESFSVIVGSDEVRTG 147 (287)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~-----~~~gl~~~fd~i~~~~~~~~~ 147 (287)
+.+... +... ..++.||+.++|+.+++. ++++++||++...++..+. +.+|+..+|+.++++++.+..
T Consensus 100 ~~~~~~----~~~~--~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~~~~~~ 172 (229)
T 4dcc_A 100 KQIDAA----WNSF--LVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSYEMKMA 172 (229)
T ss_dssp HHHHHH----HHTT--BCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHHHHTCC
T ss_pred HHHHHH----HHHH--HHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeecccCCC
Confidence 444332 2221 234679999999999998 9999999999988775441 345788899999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 148 kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
||+|++|+.+++.+|++|++|++|||+.+|+.+|+++|+.+++++++.
T Consensus 173 KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 173 KPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPKAGE 220 (229)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCCTTC
T ss_pred CCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEECCHH
Confidence 999999999999999999999999999999999999999999998853
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.7e-26 Score=182.91 Aligned_cols=176 Identities=17% Similarity=0.172 Sum_probs=132.0
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCC-----------CHHHHHHHHHHHhCCCCCHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGK-----------TPLEEAAIIVEDYGLPCAKHEFV 76 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 76 (287)
++|+|+||+||||++++.... ...++++|..........+.+. +..+....+...++.......+.
T Consensus 4 m~k~iiFDlDGTL~d~~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (211)
T 2i6x_A 4 MIRNIVFDLGGVLIHLNREES---IRRFKAIGVADIEEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYIGKELTYQQVY 80 (211)
T ss_dssp CCSEEEECSBTTTEEECHHHH---HHHHHHTTCTTHHHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHHTSCCCHHHHH
T ss_pred cceEEEEeCCCeeEecchHHH---HHHHHHhCCchHHHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHhCCCCCHHHHH
Confidence 479999999999999876543 4556667765433222222222 23333333444443322222221
Q ss_pred HHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh------cCCccccceeeccCCcCCCCCC
Q 023109 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPS 150 (287)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~------~gl~~~fd~i~~~~~~~~~kp~ 150 (287)
..+.. ....++|++.++++.+++ |++++++||++...++..+ +. +|+..+|+.++++++.+..||+
T Consensus 81 ----~~~~~--~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~l~~~~~~~l~~~f~~~~~~~~~~~~Kp~ 152 (211)
T 2i6x_A 81 ----DALLG--FLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAM-SPRFLPSGRTLDSFFDKVYASCQMGKYKPN 152 (211)
T ss_dssp ----HHHGG--GEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHT-STTSSTTCCCGGGGSSEEEEHHHHTCCTTS
T ss_pred ----HHHHH--hhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHH-hhhccccccCHHHHcCeEEeecccCCCCCC
Confidence 11111 134678999999999999 9999999999999888888 76 7999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
|+.+.++++.+|++|++|++|||+.+|+.+|+++|+.+++++.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~~~~ 196 (211)
T 2i6x_A 153 EDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCPDNG 196 (211)
T ss_dssp HHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECCCTT
T ss_pred HHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEECCH
Confidence 99999999999999999999999999999999999999999884
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-25 Score=179.80 Aligned_cols=177 Identities=19% Similarity=0.240 Sum_probs=132.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-HHH------hC-CCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI------VG-KTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (287)
++|+|+||+||||++++. ....+..+++++|........ ... .+ ......+..+....+.....+. +
T Consensus 3 ~~k~viFDlDGTL~d~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 77 (200)
T 3cnh_A 3 TIKALFWDIGGVLLTNGW-DREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQVVFYQPRDFTPED----F 77 (200)
T ss_dssp CCCEEEECCBTTTBCCSS-CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHHTTTSCCSSCHHH----H
T ss_pred CceEEEEeCCCeeECCCc-chHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHHHHHcCCCCCHHH----H
Confidence 479999999999999763 235667778888875432211 111 11 1222222222222221111111 1
Q ss_pred HHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 80 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
.+.+ .....++|++.++|+.++++| +++++||++...++..+ +.+|+..+|+.++++++.+..||+|+.+.++++
T Consensus 78 ~~~~---~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l-~~~~~~~~f~~~~~~~~~~~~Kp~~~~~~~~~~ 152 (200)
T 3cnh_A 78 RAVM---EEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRI-RTFGLGEFLLAFFTSSALGVMKPNPAMYRLGLT 152 (200)
T ss_dssp HHHH---HHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHH-HHHTGGGTCSCEEEHHHHSCCTTCHHHHHHHHH
T ss_pred HHHH---HhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHH-HhCCHHHhcceEEeecccCCCCCCHHHHHHHHH
Confidence 1111 234568999999999999999 99999999999999888 888999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
.+|++|++|++|||+.+|+.+|+++|+.+++++++
T Consensus 153 ~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~ 187 (200)
T 3cnh_A 153 LAQVRPEEAVMVDDRLQNVQAARAVGMHAVQCVDA 187 (200)
T ss_dssp HHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSCH
T ss_pred HcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEECCc
Confidence 99999999999999999999999999999999874
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-27 Score=190.35 Aligned_cols=199 Identities=17% Similarity=0.204 Sum_probs=138.5
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-H---hCCCH--HH------HHHHHHHHhCCCCCHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-I---VGKTP--LE------EAAIIVEDYGLPCAKHEF 75 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~---~~~~~--~~------~~~~~~~~~~~~~~~~~~ 75 (287)
++|+|+||+||||+|+...+..++.++++++|.+.+...... + .|... .. .+..++..++.+. .++.
T Consensus 2 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~ 80 (220)
T 2zg6_A 2 KYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILGIYP-SERL 80 (220)
T ss_dssp CCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHTCCC-CHHH
T ss_pred CceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcCCCC-cHHH
Confidence 478999999999999987777888889999998876544322 1 22211 00 0344555565543 2233
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHH
Q 023109 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFL 155 (287)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~ 155 (287)
...+.+.+. .....+++||+.++|+.++++|++++++||++.. +...+ +++|+..+|+.++++++.+..||+|+.|.
T Consensus 81 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~~-~~~~l-~~~gl~~~f~~~~~~~~~~~~Kp~~~~~~ 157 (220)
T 2zg6_A 81 VKELKEADI-RDGEAFLYDDTLEFLEGLKSNGYKLALVSNASPR-VKTLL-EKFDLKKYFDALALSYEIKAVKPNPKIFG 157 (220)
T ss_dssp HHHHHHTTT-TCEEEEECTTHHHHHHHHHTTTCEEEECCSCHHH-HHHHH-HHHTCGGGCSEEC-----------CCHHH
T ss_pred HHHHHHHhh-cccCceECcCHHHHHHHHHHCCCEEEEEeCCcHH-HHHHH-HhcCcHhHeeEEEeccccCCCCCCHHHHH
Confidence 333322111 1135678999999999999999999999999774 77788 88899999999999999999999999999
Q ss_pred HHHHHcCCCCCcEEEEeCCHh-hHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 156 EAAKRLNMEPSSSLVIEDSVI-GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 156 ~~~~~l~~~~~~~l~iGDs~~-Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
.+++.+|++| +||||+.+ |+.+|+++|+.++++..+...... +++++++.++...
T Consensus 158 ~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~~~~----~~~i~~l~el~~~ 213 (220)
T 2zg6_A 158 FALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFYPDV----RDRVKNLREALQK 213 (220)
T ss_dssp HHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCCTTC----CSCBSSHHHHHHH
T ss_pred HHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCCCCc----ceEECCHHHHHHH
Confidence 9999999998 99999998 999999999999999874322111 4567777776543
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-26 Score=187.83 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=142.7
Q ss_pred CCccc-cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCH------HHHHHHhCCC-HHHHHHHHHHHhCCCCCH
Q 023109 1 MAQPL-KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDG------REKHKIVGKT-PLEEAAIIVEDYGLPCAK 72 (287)
Q Consensus 1 M~~~~-~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 72 (287)
|...| +.++|+|+||+||||+|+...+..+++++++++|..... .......|.. ....+..+......+
T Consensus 2 m~~~m~~~~~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--- 78 (231)
T 2p11_A 2 MQATTATPHDIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRD--- 78 (231)
T ss_dssp -------CCSEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTC---
T ss_pred CccccCCCCCeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccc---
Confidence 44433 356899999999999999999989999999988865432 1222333433 222222222222111
Q ss_pred HHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHH
Q 023109 73 HEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPD 152 (287)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~ 152 (287)
.....+.+.+.......+++||+.++|+.|+++| +++++||++...++..+ +++|+.++|+.++.. . ++++.
T Consensus 79 -~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l-~~~gl~~~f~~~~~~---~--~~K~~ 150 (231)
T 2p11_A 79 -TRLLLMSSFLIDYPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKI-ARSGLWDEVEGRVLI---Y--IHKEL 150 (231)
T ss_dssp -TGGGGGHHHHHHCCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHH-HHTTHHHHTTTCEEE---E--SSGGG
T ss_pred -hHHHHHHHHHHHHHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHH-HHcCcHHhcCeeEEe---c--CChHH
Confidence 1112222333333345788999999999999999 99999999999999999 888998888876542 2 33456
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHh---hHHHHHHcCCeEEEECCCCC--c-cccc-c-CCcEEeCCccCcCccc
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVI---GVVAGKAAGMEVVAVPSLPK--Q-THRY-T-AADEVINSLLDLRPEK 218 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~---Dv~~a~~aG~~~i~v~~~~~--~-~~~~-~-~a~~v~~~l~el~~~~ 218 (287)
.+..+++ +++|++|+||||+.+ |+.+|+++|+.++++..+.. . .... . .++++++++.++...+
T Consensus 151 ~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~~g~~~~~~~~l~~~~~~~~~i~~~~el~~~l 222 (231)
T 2p11_A 151 MLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPRQGHYAFDPKEISSHPPADVTVERIGDLVEMD 222 (231)
T ss_dssp CHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEECCSSSSSCHHHHHHSCCCSEEESSGGGGGGCG
T ss_pred HHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeCCCCCCCcchhccccCCCceeecCHHHHHHHH
Confidence 7776666 789999999999999 99999999999999988632 1 1222 2 3899999999986654
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-26 Score=182.33 Aligned_cols=179 Identities=15% Similarity=0.150 Sum_probs=129.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhC-----------CCHHHHHHHHHHHhCCCCCHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVG-----------KTPLEEAAIIVEDYGLPCAKHEF 75 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~ 75 (287)
+++|+|+||+||||++++. ..+...+.+++........+...+ .+..+....+...++.......+
T Consensus 5 ~~~k~viFDlDGTL~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 81 (206)
T 2b0c_A 5 EAKMLYIFDLGNVIVDIDF---NRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQF 81 (206)
T ss_dssp -CCCEEEECCBTTTEEEET---HHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHH
T ss_pred ccccEEEEcCCCeeecCcH---HHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHhCCCCCHHHH
Confidence 4689999999999999872 112233344444332222222221 23333344444444433333222
Q ss_pred HHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh-cCCccccceeeccCCcCCCCCCHHHH
Q 023109 76 VNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIF 154 (287)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~-~gl~~~fd~i~~~~~~~~~kp~~~~~ 154 (287)
. +.+.. ....++|++.++|+.++++|++++++||++...++..+ .. +|+..+|+.++++++.+..||+|+.+
T Consensus 82 ~----~~~~~--~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~-~~~~~l~~~f~~~~~~~~~~~~Kp~~~~~ 154 (206)
T 2b0c_A 82 S----HGWQA--VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP-EEYPEIRDAADHIYLSQDLGMRKPEARIY 154 (206)
T ss_dssp H----HHHHT--CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCG-GGCHHHHHHCSEEEEHHHHTCCTTCHHHH
T ss_pred H----HHHHH--HhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHH-HhccChhhheeeEEEecccCCCCCCHHHH
Confidence 2 11111 13568899999999999999999999999887766555 44 67888899999999889999999999
Q ss_pred HHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 155 LEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 155 ~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
..+++.+|++|++|++|||+.+|+.+|+++|+.+++++.+.
T Consensus 155 ~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 155 QHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 195 (206)
T ss_dssp HHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEecCCc
Confidence 99999999999999999999999999999999999998843
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-25 Score=176.79 Aligned_cols=130 Identities=18% Similarity=0.235 Sum_probs=114.7
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCCccccceeeccCCc----CCCCCCHHHHHHHHHH
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGWNESFSVIVGSDEV----RTGKPSPDIFLEAAKR 160 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---~~~~~~l~~~~gl~~~fd~i~~~~~~----~~~kp~~~~~~~~~~~ 160 (287)
...+++||+.++|+.|+++|++++++||++. ..+...+ +.+|+..+|+.++++++. +..||+|+.|..+++.
T Consensus 31 ~~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~ 109 (189)
T 3ib6_A 31 PEVVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVL-TNFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNA 109 (189)
T ss_dssp TTCCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HHTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHH
T ss_pred CCceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHH-HhcCchhheEEEEEccccccccCCCCcCHHHHHHHHHH
Confidence 4578999999999999999999999999976 7788888 899999999999999876 7899999999999999
Q ss_pred cCCCCCcEEEEeCC-HhhHHHHHHcCCeEEEECCCCCc---cccc-cCCcEEeC--CccCcCccc
Q 023109 161 LNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQ---THRY-TAADEVIN--SLLDLRPEK 218 (287)
Q Consensus 161 l~~~~~~~l~iGDs-~~Dv~~a~~aG~~~i~v~~~~~~---~~~~-~~a~~v~~--~l~el~~~~ 218 (287)
+|++|++|+||||+ .+|+.+|+++|+.++++.++... .... ..++++++ ++.++.+.+
T Consensus 110 ~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 110 LQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp HTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred cCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 99999999999999 69999999999999999886542 2222 37899999 999886654
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-25 Score=181.03 Aligned_cols=187 Identities=14% Similarity=0.125 Sum_probs=132.1
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH--HHHh-CCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIV-GKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
|+++|+|+||+||||++++... .+.+.++........ +... .....+.+........ .... +.
T Consensus 1 M~~~k~vifDlDGTL~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~ 66 (217)
T 3m1y_A 1 MSLQKLAVFDFDSTLVNAETIE-----SLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSKLK-NMPL--------KL 66 (217)
T ss_dssp -CCCEEEEEECBTTTBSSCHHH-----HHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHTTT-TCBH--------HH
T ss_pred CCCCcEEEEeCCCCCCCchhHH-----HHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHHhc-CCCH--------HH
Confidence 3468999999999999985422 333333331100000 0001 1122222222222221 1111 11
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeec----------cCCcCCCCCCHH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPD 152 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~----------~~~~~~~kp~~~ 152 (287)
+.+.....++.||+.++++.++++|++++++||++...++..+ +.+|+..+|+.+++ +++....||+|+
T Consensus 67 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~ 145 (217)
T 3m1y_A 67 AKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYR-DLLHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGE 145 (217)
T ss_dssp HHHHHTTCCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHH
T ss_pred HHHHHhcCcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHH-HHcCcchhccceeEEeCCEEEeeeccCCCCCCChHH
Confidence 2223345789999999999999999999999999999999888 88899999998863 334567899999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
.++.+++.+|++|++|++|||+.+|+++++.+|+.+++ +. .+..+..|++++++.
T Consensus 146 ~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~-~~---~~~l~~~ad~v~~~~ 200 (217)
T 3m1y_A 146 MLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAF-NA---KEVLKQHATHCINEP 200 (217)
T ss_dssp HHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEE-SC---CHHHHTTCSEEECSS
T ss_pred HHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEE-Cc---cHHHHHhcceeeccc
Confidence 99999999999999999999999999999999999887 43 455677889999764
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.3e-25 Score=175.13 Aligned_cols=125 Identities=20% Similarity=0.211 Sum_probs=105.7
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC-C
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP-S 166 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~-~ 166 (287)
....++||+.++|+.|+++|++++++|+.....+...+ . .+|+.++++++....||+|+.|.++++++++.+ +
T Consensus 33 ~~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~-~-----~~~d~v~~~~~~~~~KP~p~~~~~a~~~l~~~~~~ 106 (196)
T 2oda_A 33 EHAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA-A-----PVNDWMIAAPRPTAGWPQPDACWMALMALNVSQLE 106 (196)
T ss_dssp GGGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH-T-----TTTTTCEECCCCSSCTTSTHHHHHHHHHTTCSCST
T ss_pred ccCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc-C-----ccCCEEEECCcCCCCCCChHHHHHHHHHcCCCCCc
Confidence 34578899999999999999999999999888774433 2 358999999999999999999999999999976 8
Q ss_pred cEEEEeCCHhhHHHHHHcCCeEEEECCCCCc------------------------cc-cccCCcEEeCCccCcCccc
Q 023109 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------TH-RYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~------------------------~~-~~~~a~~v~~~l~el~~~~ 218 (287)
+|+||||+.+|+.+|+++|+.++++..+... .. ....++++++++.++...+
T Consensus 107 ~~v~VGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~~~d~vi~~~~eL~~~l 183 (196)
T 2oda_A 107 GCVLISGDPRLLQSGLNAGLWTIGLASCGPLCGLSPSQWQALNNAEREQRRAQATLKLYSLGVHSVIDHLGELESCL 183 (196)
T ss_dssp TCEEEESCHHHHHHHHHHTCEEEEESSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred cEEEEeCCHHHHHHHHHCCCEEEEEccCCccccccHHHhhhcchhhhhhhHHHHHHHHHHcCCCEEeCCHHHHHHHH
Confidence 9999999999999999999999999886531 00 1246899999999986543
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.3e-25 Score=172.29 Aligned_cols=127 Identities=20% Similarity=0.261 Sum_probs=107.7
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCccccceee-----ccCCcCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-----GSDEVRTGK 148 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~~fd~i~-----~~~~~~~~k 148 (287)
..+++||+.++|++|+++|++++++||++. ..+...+ +.+| .+|+.++ ++++....|
T Consensus 25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g--~~~~~~~~~~~~~~~~~~~~K 101 (179)
T 3l8h_A 25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRAL-AQMG--GVVDAIFMCPHGPDDGCACRK 101 (179)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHH-HHTT--CCCCEEEEECCCTTSCCSSST
T ss_pred HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHH-HhCC--CceeEEEEcCCCCCCCCCCCC
Confidence 467899999999999999999999999986 5566677 6777 3455544 357788899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccc----cCCcEEeCCccCcCccc
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRY----TAADEVINSLLDLRPEK 218 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~----~~a~~v~~~l~el~~~~ 218 (287)
|+|+.|.++++.+|++|++|+||||+.+|+.+|+++|+.++++.++....... ..++++++++.|+.+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~d~v~~~l~el~~~l 175 (179)
T 3l8h_A 102 PLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTGNGRKTLAQGGLPEGTRVCEDLAAVAEQL 175 (179)
T ss_dssp TSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTTTHHHHHHHCCCCTTEEEESSHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCCCcchhhhhcccCCCcEEecCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999976544432 56899999999986554
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=170.97 Aligned_cols=194 Identities=14% Similarity=0.160 Sum_probs=131.7
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-HHHHHHHhCC--CHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGK--TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
+++|+|+||+||||+|++. +..+++.+|.... ........+. +..+.+......... ..+. +.+.+
T Consensus 12 ~~~k~viFD~DGTLvd~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~ 80 (225)
T 1nnl_A 12 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SREQ----VQRLI 80 (225)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CHHH----HHHHH
T ss_pred hhCCEEEEeCccccccccc-----HHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHHhcC--CHHH----HHHHH
Confidence 4579999999999999964 3466777887542 2222223322 223333222222221 1111 11222
Q ss_pred HhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--cccceee--------ccCCcC----CCCC
Q 023109 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSVIV--------GSDEVR----TGKP 149 (287)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~--~~fd~i~--------~~~~~~----~~kp 149 (287)
.. ...+++||+.++|+.|+++|++++++||++...++..+ +++|+. .+|+.++ .+.+.. ..+|
T Consensus 81 ~~--~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (225)
T 1nnl_A 81 AE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 157 (225)
T ss_dssp HH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred Hh--ccCCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHH-HHcCCCcccEEeeeEEEcCCCcEecCCCCCcccCCCc
Confidence 11 24678999999999999999999999999999999999 888987 3776653 233222 2467
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
||+.+.++++.+|+ ++|++|||+.+|+.+|+++|+ ++.++...........++++++++.++...
T Consensus 158 Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (225)
T 1nnl_A 158 KGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVELLGE 222 (225)
T ss_dssp HHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSSCCCHHHHHHCSEEESCGGGGCC-
T ss_pred hHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCccccHHHHhcCCeeecCHHHHHHH
Confidence 88999999999998 789999999999999999999 777755332223345689999999988654
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.7e-25 Score=182.92 Aligned_cols=203 Identities=19% Similarity=0.214 Sum_probs=142.3
Q ss_pred CccEEEEecCCcccccHHHHHHH--HHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEV--LKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSM 82 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 82 (287)
++|+|+||+||||+++...+... +.+.+++.|..+.. .....|++.......+.. .+.+.....+ .......
T Consensus 2 ~~k~i~fDlDGTLl~~~~~~~~~~~~~~~l~~~g~~~~~--~t~~~g~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 78 (250)
T 2c4n_A 2 TIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVL--LTNYPSQTGQDLANRFAT-AGVDVPDSVFYTSAMATADF 78 (250)
T ss_dssp CCCEEEEECBTTTEETTEECTTHHHHHHHHHHTTCCEEE--EESCCSCCHHHHHHHHHH-TTCCCCGGGEEEHHHHHHHH
T ss_pred CccEEEEcCcceEEeCCEeCcCHHHHHHHHHHcCCcEEE--EECCCCCCHHHHHHHHHH-cCCCCCHHHeEcHHHHHHHH
Confidence 47999999999999986554444 44555677766432 112235666555554443 5543222221 0111122
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEE---------------------------------EEeCCChHHHHHHHHhhc
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMA---------------------------------LASNSHRATIESKISYQH 129 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~---------------------------------l~T~~~~~~~~~~l~~~~ 129 (287)
.........+.+++.++++.+++.|++++ ++|+.+ ......+ ..+
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~t~~~-~~~~~~~-~~~ 156 (250)
T 2c4n_A 79 LRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSYNWDMMHKAAYFVANGARFIATNPD-THGRGFY-PAC 156 (250)
T ss_dssp HHTSSCCEEEEECCTHHHHHHHHTTCEECSSSCSEEEECCCTTCCHHHHHHHHHHHHTTCEEEESCCC-SBSSTTC-BCH
T ss_pred HHhcCCCEEEEEcCHHHHHHHHHcCCcccCCCCCEEEEeCCCCCCHHHHHHHHHHHHCCCEEEEECCC-CCCCCee-ecc
Confidence 22222345677999999999999999998 888876 3333333 333
Q ss_pred C-CccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCeEEEECCCCCcc-ccc---cC
Q 023109 130 G-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQT-HRY---TA 203 (287)
Q Consensus 130 g-l~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs-~~Dv~~a~~aG~~~i~v~~~~~~~-~~~---~~ 203 (287)
+ +...|+.+.+.+....+||+|..++++++.+|++|++|++|||+ .||++|++.+|+.++++.++.... ... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~ 236 (250)
T 2c4n_A 157 GALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR 236 (250)
T ss_dssp HHHHHHHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSC
T ss_pred hHHHHHHHHHhCCCceEeCCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCC
Confidence 4 44556777777778889999999999999999999999999999 699999999999999999876543 232 57
Q ss_pred CcEEeCCccCcC
Q 023109 204 ADEVINSLLDLR 215 (287)
Q Consensus 204 a~~v~~~l~el~ 215 (287)
|+++++++.++.
T Consensus 237 ~~~v~~~~~el~ 248 (250)
T 2c4n_A 237 PSWIYPSVAEID 248 (250)
T ss_dssp CSEEESSGGGCC
T ss_pred CCEEECCHHHhh
Confidence 899999998875
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=6.7e-24 Score=171.31 Aligned_cols=127 Identities=22% Similarity=0.268 Sum_probs=108.0
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCccccceeec------------c
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVG------------S 141 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~---------------~~~~~~~l~~~~gl~~~fd~i~~------------~ 141 (287)
..+++||+.++|++|+++|++++++||++ ...+...+ +.+|+. |+.++. +
T Consensus 48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--f~~~~~~~~~~~~~~~~~~ 124 (211)
T 2gmw_A 48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFR 124 (211)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGB
T ss_pred cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHH-HHcCCc--eEEEEECCcCCCCcccccC
Confidence 46789999999999999999999999998 46777788 788886 777653 2
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeE-EEECCCCCcccc-ccCCcEEeCCccCcCccc
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~-i~v~~~~~~~~~-~~~a~~v~~~l~el~~~~ 218 (287)
++....||+|+.|.++++.++++|++|+||||+.+|+.+|+++|+.+ +++.++....+. ...++++++++.++...+
T Consensus 125 ~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 125 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred ccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 45677999999999999999999999999999999999999999999 999886543322 346899999999986654
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-24 Score=177.62 Aligned_cols=203 Identities=15% Similarity=0.156 Sum_probs=140.0
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-HHH-hC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKI-VG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
++++|+||+||||++++... .+++.++. ...... ... .+ .+..+.+..++...... ..+ .+.+++
T Consensus 5 ~~k~viFD~DGTL~d~ds~~-----~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~----~~~~~~- 72 (236)
T 2fea_A 5 RKPFIICDFDGTITMNDNII-----NIMKTFAP-PEWMALKDGVLSKTLSIKEGVGRMFGLLPSS-LKE----EITSFV- 72 (236)
T ss_dssp CCEEEEECCTTTTBSSCHHH-----HHHHHHSC-THHHHHHHHHHTTSSCHHHHHHHHHTTSBGG-GHH----HHHHHH-
T ss_pred CCcEEEEeCCCCCCccchHH-----HHHHHhch-hhHHHHHHHHHhCcCcHHHHHHHHHHhcCCC-hHH----HHHHHH-
Confidence 46899999999999764321 12222232 111111 112 22 34444544444433210 122 222221
Q ss_pred hhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCC--------CCCCHHH-HH
Q 023109 85 DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRT--------GKPSPDI-FL 155 (287)
Q Consensus 85 ~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~--------~kp~~~~-~~ 155 (287)
....+++||+.++|+.|+++|++++++||++...++..+ + |+..+ +.+++++.... .||+|.. +.
T Consensus 73 --~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l-~--~l~~~-~~v~~~~~~~~~~~~~~~~~kp~p~~~~~ 146 (236)
T 2fea_A 73 --LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-E--GIVEK-DRIYCNHASFDNDYIHIDWPHSCKGTCSN 146 (236)
T ss_dssp --HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-T--TTSCG-GGEEEEEEECSSSBCEEECTTCCCTTCCS
T ss_pred --hcCCCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHH-h--cCCCC-CeEEeeeeEEcCCceEEecCCCCcccccc
Confidence 235789999999999999999999999999999888888 5 76555 88888876553 7888873 44
Q ss_pred -------HHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-cc-CCcEEeCCccCcCccccCCCCccc
Q 023109 156 -------EAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YT-AADEVINSLLDLRPEKWGLPPFQD 226 (287)
Q Consensus 156 -------~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~-~a~~v~~~l~el~~~~~~~~~~~~ 226 (287)
++++.++++|++|+||||+.+|+.+|+++|+.++. .+. .... .. .++++++++.++...+......++
T Consensus 147 ~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~--~~~-~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~ 223 (236)
T 2fea_A 147 QCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR--DYL-LNECREQNLNHLPYQDFYEIRKEIENVKEVQE 223 (236)
T ss_dssp CCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC--HHH-HHHHHHTTCCEECCSSHHHHHHHHHTSHHHHH
T ss_pred ccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec--hHH-HHHHHHCCCCeeecCCHHHHHHHHHHhHHHHH
Confidence 88999999999999999999999999999998863 111 1222 22 378999999999888877778888
Q ss_pred cccCC
Q 023109 227 WIEGT 231 (287)
Q Consensus 227 w~~~~ 231 (287)
|+.+.
T Consensus 224 ~~~~~ 228 (236)
T 2fea_A 224 WLQNK 228 (236)
T ss_dssp HHTCC
T ss_pred hhhCc
Confidence 88754
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.9e-23 Score=177.30 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=132.9
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH--HHHhCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
++++|+|+||+||||++++.. ..+.+.+|........ ....+. ...+.+......... ...+ .
T Consensus 105 ~~~~kaviFDlDGTLid~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~l~~-~~~~--------~ 170 (317)
T 4eze_A 105 LPANGIIAFDMDSTFIAEEGV-----DEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGMLKG-TPKA--------V 170 (317)
T ss_dssp CCCSCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTTT-CBHH--------H
T ss_pred CCCCCEEEEcCCCCccCCccH-----HHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHhcC-CCHH--------H
Confidence 457899999999999998653 3334445543211111 111121 222333322222211 1111 1
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc----------CCcCCCCCCHH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----------DEVRTGKPSPD 152 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~----------~~~~~~kp~~~ 152 (287)
+.......+++||+.++++.++++|++++++||+....++..+ +.+|+..+|+.++.. ......||+|+
T Consensus 171 i~~~~~~~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l-~~lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~ 249 (317)
T 4eze_A 171 LNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLK-ARYQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQ 249 (317)
T ss_dssp HHHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred HHHHHhCCEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHH-HHcCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHH
Confidence 1222245789999999999999999999999999999999999 889999999877643 33446689999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCcc
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPE 217 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~ 217 (287)
.+.++++.+|++|++|+||||+.+|+.+++++|+.+++ +. .+.....++.++ +++.++...
T Consensus 250 ~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~-~~---~~~~~~~a~~~i~~~~L~~ll~~ 312 (317)
T 4eze_A 250 TLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW-KA---KPVVREKIHHQINYHGFELLLFL 312 (317)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SC---CHHHHHHCCEEESSSCGGGGGGG
T ss_pred HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe-CC---CHHHHHhcCeeeCCCCHHHHHHH
Confidence 99999999999999999999999999999999998877 32 333444555554 355555443
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=7.1e-23 Score=164.31 Aligned_cols=191 Identities=17% Similarity=0.203 Sum_probs=126.0
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH--HHHhCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
.++|+|+||+||||+|+.. ++.+.+.++........ +...+. ...+.+........ ...... +
T Consensus 3 ~~~k~i~fDlDGTL~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~ 68 (211)
T 1l7m_A 3 KKKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLK-DLPIEK--------V 68 (211)
T ss_dssp CCCEEEEEECCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT-TCBHHH--------H
T ss_pred cCCcEEEEeCCCCCCCccH-----HHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHHHHHhc-CCCHHH--------H
Confidence 3579999999999999953 24445555543211111 112221 22222111111111 011111 1
Q ss_pred HhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC----------cCCCCCCHHH
Q 023109 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE----------VRTGKPSPDI 153 (287)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~----------~~~~kp~~~~ 153 (287)
.+.+...++.|++.++++.++++|++++++|++....++..+ +.+++..+|+..+...+ ....++++..
T Consensus 69 ~~~~~~~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~ 147 (211)
T 1l7m_A 69 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 147 (211)
T ss_dssp HHHHHTCCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred HHHHHhCCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCCCeEEEeeeEEECCEEcCCcccCccCCccHHHH
Confidence 112234567899999999999999999999999888887777 77788766654432211 1235677899
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC--ccCcCc
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDLRP 216 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~--l~el~~ 216 (287)
+.++++.+|+++++|++|||+.||+++++.||+.+++. . .+..+..+++++++ +.++..
T Consensus 148 l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~-~---~~~~~~~a~~v~~~~~~~~l~~ 208 (211)
T 1l7m_A 148 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC-A---KPILKEKADICIEKRDLREILK 208 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES-C---CHHHHTTCSEEECSSCGGGGGG
T ss_pred HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC-C---CHHHHhhcceeecchhHHHHHH
Confidence 99999999999999999999999999999999976543 2 24446678999988 777654
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.3e-23 Score=187.75 Aligned_cols=180 Identities=18% Similarity=0.184 Sum_probs=122.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHh------------CC-CHHHHHHHHHHH-------hC
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIV------------GK-TPLEEAAIIVED-------YG 67 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------------~~-~~~~~~~~~~~~-------~~ 67 (287)
++|+|+||+||||+++.. ...+.......+............ +. ...+....+... ..
T Consensus 2 ~~k~viFD~DGTL~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (555)
T 3i28_A 2 TLRAAVFDLDGVLALPAV--FGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQWIPLMEENCRKCSETAK 79 (555)
T ss_dssp --CEEEECTBTTTEESCT--HHHHHHHHHHTTCCTTHHHHHHHTTGGGSHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEEecCCeeecchh--HHHHHHHHHHhCCcHHHHHHHHhccCcccchhHHhcCCCCHHHHHHHHHHHHHHhhhccC
Confidence 489999999999997753 234555566666554332211111 11 111111111110 00
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCC------ChHHHHHHHHhhcCCccccceeecc
Q 023109 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNS------HRATIESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~------~~~~~~~~l~~~~gl~~~fd~i~~~ 141 (287)
....... .+.+.+.+.....+++||+.++|+.|+++|++++++||+ ........+ .|+..+||.++++
T Consensus 80 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~---~~l~~~fd~i~~~ 153 (555)
T 3i28_A 80 VCLPKNF---SIKEIFDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLM---CELKMHFDFLIES 153 (555)
T ss_dssp CCCCTTC---CHHHHHHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHH---HHHHTTSSEEEEH
T ss_pred CCCCccc---cHHHHHHHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHh---hhhhhheeEEEec
Confidence 0000000 022223333345789999999999999999999999998 333333222 2677789999999
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
++++..||+|++|.++++++|++|++|++|||+.+|+.+|+++|+.+++++.+.
T Consensus 154 ~~~~~~KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~~~~ 207 (555)
T 3i28_A 154 CQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQDTD 207 (555)
T ss_dssp HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECSSHH
T ss_pred cccCCCCCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEECCCc
Confidence 999999999999999999999999999999999999999999999999998743
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=99.88 E-value=6.6e-22 Score=161.48 Aligned_cols=182 Identities=17% Similarity=0.091 Sum_probs=123.0
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH---------HHHhCC-CHHHHHHHHHHHhCCCCCHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK---------HKIVGK-TPLEEAAIIVEDYGLPCAKHEFV 76 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~---------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 76 (287)
+++++|+||+||||+|++... .+...+...+........ ....+. +...........+. ....+++.
T Consensus 2 ~~~k~viFDlDGTL~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ 78 (232)
T 3fvv_A 2 TTRRLALFDLDHTLLPLDSDY--QWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA-AHSPVELA 78 (232)
T ss_dssp CCCEEEEECCBTTTBSSCHHH--HHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH-TSCHHHHH
T ss_pred CCCcEEEEeCCCCCcCCchHH--HHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc-CCCHHHHH
Confidence 457899999999999997653 344445454443011111 111222 22233322222221 22345554
Q ss_pred HHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC----------CcCC
Q 023109 77 NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----------EVRT 146 (287)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~----------~~~~ 146 (287)
....+.+..... ..++||+.++|+.++++|++++|+|++....++..+ +++|+...|...+..+ ....
T Consensus 79 ~~~~~~~~~~~~-~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~ 156 (232)
T 3fvv_A 79 AWHEEFMRDVIR-PSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIA-RAFGVQHLIATDPEYRDGRYTGRIEGTPSF 156 (232)
T ss_dssp HHHHHHHHHTTG-GGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCCEEEECEEEEETTEEEEEEESSCSS
T ss_pred HHHHHHHHHhhh-hhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEcceEEECCEEeeeecCCCCc
Confidence 444444443322 257999999999999999999999999999999999 8889876665433211 2234
Q ss_pred CCCCHHHHHHHHHHcC---CCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 147 GKPSPDIFLEAAKRLN---MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~---~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.++++..+..+++.+| ++|++|++||||.+|+++++.+|+.+++.+.
T Consensus 157 ~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~~~ 206 (232)
T 3fvv_A 157 REGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAANPS 206 (232)
T ss_dssp THHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEESCC
T ss_pred chHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEECcC
Confidence 5667788999999999 9999999999999999999999998876443
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=99.88 E-value=7.3e-24 Score=176.77 Aligned_cols=126 Identities=15% Similarity=0.139 Sum_probs=101.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH--HHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT--IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~--~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
...++|++.++++.++ +|+++ ++||.+... ....+....++..+|+.++++++....||+|+.|..+++.+|++|+
T Consensus 124 ~~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~ 201 (264)
T 1yv9_A 124 TELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKE 201 (264)
T ss_dssp TTCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCCCEECSTTSHHHHHHHHHHHCSCGG
T ss_pred CCcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCHH
Confidence 3457899999999997 88887 889987643 1211113334666789888888888999999999999999999999
Q ss_pred cEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcc-cccc---CCcEEeCCccCcCc
Q 023109 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQT-HRYT---AADEVINSLLDLRP 216 (287)
Q Consensus 167 ~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~-~~~~---~a~~v~~~l~el~~ 216 (287)
+|++|||++ +|+.+|+++|+.++++.++.... .... .|+++++++.++..
T Consensus 202 ~~~~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~l~~~~~~~d~v~~~l~el~~ 256 (264)
T 1yv9_A 202 QVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVDSLDEWTF 256 (264)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEESSGGGCCT
T ss_pred HEEEECCCcHHHHHHHHHcCCcEEEECCCCCCHHHHHhcCCCCCEEEecHHHHhh
Confidence 999999995 99999999999999999876543 2222 68999999998754
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=99.88 E-value=4.8e-24 Score=177.06 Aligned_cols=208 Identities=15% Similarity=0.156 Sum_probs=137.6
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHH--HHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHH---HH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLK--TFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFV---NE 78 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 78 (287)
++++++|+|+||+||||+++...+..+.. +.+++.|..+.. .....+.+....... +..++.+...+++. ..
T Consensus 2 ~~~~~ik~i~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~--~t~~~~~~~~~~~~~-l~~~g~~~~~~~~~~~~~~ 78 (259)
T 2ho4_A 2 AARRALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRF--VTNTTKETKKDLLER-LKKLEFEISEDEIFTSLTA 78 (259)
T ss_dssp ----CCCEEEEESSSSSCC---CCTTHHHHHHHHHTSSCEEEE--EECCSSCCHHHHHHH-HHHTTCCCCGGGEEEHHHH
T ss_pred cchhhCCEEEEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEE--EeCCCCcCHHHHHHH-HHHcCCCccHHHeecHHHH
Confidence 34567999999999999998766544432 344555654311 111123444444333 34556543322211 00
Q ss_pred HHHHHHhh---------------h----------------ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHh
Q 023109 79 VYSMFSDH---------------L----------------CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISY 127 (287)
Q Consensus 79 ~~~~~~~~---------------~----------------~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~ 127 (287)
........ . ....+++++.++++.++ .|+++ ++|+.+.......+ .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~-~ 155 (259)
T 2ho4_A 79 ARNLIEQKQVRPMLLLDDRALPEFTGVQTQDPNAVVIGLAPEHFHYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDG-L 155 (259)
T ss_dssp HHHHHHHHTCCEEEESCGGGGGGGTTCCCSSCCEEEECCCGGGCBHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTE-E
T ss_pred HHHHHHHcCCeEEEEeCHHHHHHHHHcCCCCCCEEEEecCCCCCCHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCC-c
Confidence 01111110 0 01125689999999999 89999 99998776655555 6
Q ss_pred hcCCccccc---eeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCC-cccc--
Q 023109 128 QHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPK-QTHR-- 200 (287)
Q Consensus 128 ~~gl~~~fd---~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~-~~~~-- 200 (287)
..++..+|+ .++++++....||+|+.+..+++++|++|++|++|||+. +|+.+|+++|+.++++.++.. ..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~ 235 (259)
T 2ho4_A 156 ALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEK 235 (259)
T ss_dssp EECSHHHHHHHHHHHTCCCEECSTTSHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGG
T ss_pred ccCCcHHHHHHHHHhCCCceEecCCCHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccc
Confidence 678877776 667778888899999999999999999999999999999 999999999999999988632 2221
Q ss_pred -ccCCcEEeCCccCcCcc
Q 023109 201 -YTAADEVINSLLDLRPE 217 (287)
Q Consensus 201 -~~~a~~v~~~l~el~~~ 217 (287)
...++++++++.++...
T Consensus 236 ~~~~~~~~~~~l~~l~~~ 253 (259)
T 2ho4_A 236 INPPPYLTCESFPHAVDH 253 (259)
T ss_dssp SSSCCSEEESCHHHHHHH
T ss_pred cCCCCCEEECCHHHHHHH
Confidence 35689999999887543
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=99.87 E-value=6.9e-23 Score=164.39 Aligned_cols=183 Identities=17% Similarity=0.158 Sum_probs=128.3
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC------CHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW------DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
+|+|+||+||||++ ..++.+++++|... .........+.. ...+. ..+. ..+.+. +
T Consensus 2 ~k~viFD~DGTL~d------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~--~~~~~~----~- 63 (206)
T 1rku_A 2 MEIACLDLEGVLVP------EIWIAFAEKTGIDALKATTRDIPDYDVLMKQR----LRILD-EHGL--KLGDIQ----E- 63 (206)
T ss_dssp CEEEEEESBTTTBC------CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHH----HHHHH-HTTC--CHHHHH----H-
T ss_pred CcEEEEccCCcchh------hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHH----HHHHH-HCCC--CHHHHH----H-
Confidence 68999999999999 35667777777652 111111111111 11111 1122 222221 1
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcC--C-CCCCHHHHHHHH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVR--T-GKPSPDIFLEAA 158 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~--~-~kp~~~~~~~~~ 158 (287)
.....+++||+.++++.++++ ++++++||++...++..+ +++|+..+| +.++++++.. . .+|+|+.+..++
T Consensus 64 ---~~~~~~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~~~~~~p~p~~~~~~l 138 (206)
T 1rku_A 64 ---VIATLKPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV 138 (206)
T ss_dssp ---HHTTCCCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred ---HHHhcCCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHH-HHcCCcceecceeEEcCCceEEeeecCCCchHHHHH
Confidence 224678899999999999999 999999999999999888 889999999 5666655442 1 248889999999
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-ccCCcEE-eCCccCcCccc
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-YTAADEV-INSLLDLRPEK 218 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~~a~~v-~~~l~el~~~~ 218 (287)
+.++..|++|+||||+.+|+.+|+++|+.+++ +. .... ...++.+ ++++.++...+
T Consensus 139 ~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~~---~~~~~~~~~~~~~~~~~~~l~~~l 196 (206)
T 1rku_A 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA---PENVIREFPQFPAVHTYEDLKREF 196 (206)
T ss_dssp HHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC---CHHHHHHCTTSCEECSHHHHHHHH
T ss_pred HHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-CC---cHHHHHHHhhhccccchHHHHHHH
Confidence 99999999999999999999999999998774 32 2222 2344554 78888775543
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-23 Score=165.54 Aligned_cols=127 Identities=16% Similarity=0.124 Sum_probs=96.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc--cccce--eeccCC----cCCCCCCHHHHHHHH-H
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN--ESFSV--IVGSDE----VRTGKPSPDIFLEAA-K 159 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~--~~fd~--i~~~~~----~~~~kp~~~~~~~~~-~ 159 (287)
...+.|++.++++.++++|++++++|++....++..+ +.+|+. .+|.. +++.+. ....+|++..+.+.+ +
T Consensus 80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 158 (219)
T 3kd3_A 80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFA-DYLNIPRENIFAVETIWNSDGSFKELDNSNGACDSKLSAFDK 158 (219)
T ss_dssp TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCCGGGEEEEEEEECTTSBEEEEECTTSTTTCHHHHHHH
T ss_pred cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHcCCCcccEEEeeeeecCCCceeccCCCCCCcccHHHHHHH
Confidence 3558899999999999999999999999999999888 888884 34542 222332 245677665554444 5
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC--CCccccccCCcEEeCCccCcCcc
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL--PKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~--~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
.+|++|++|++|||+.+|++++ ++|+.++++..+ ...+..+..++++++++.++.+.
T Consensus 159 ~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~~ad~v~~~~~el~~~ 217 (219)
T 3kd3_A 159 AKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVINLSKYVARNVAELASL 217 (219)
T ss_dssp HGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHHHCSEEESSHHHHHHH
T ss_pred HhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHhhcceeeCCHHHHHHh
Confidence 5699999999999999999998 589986666543 32333467789999999987643
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-21 Score=146.41 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=93.1
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGD 173 (287)
||+.++|+.|+++|++++++||++...++..+ +.+|+..+|+.++++++....||+|+.|+.+++.++++|+++++|||
T Consensus 21 ~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD 99 (137)
T 2pr7_A 21 RRWRNLLAAAKKNGVGTVILSNDPGGLGAAPI-RELETNGVVDKVLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDD 99 (137)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSCCGGGGHHH-HHHHHTTSSSEEEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred ccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHCChHhhccEEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcC
Confidence 46778999999999999999999988888888 77888899999999998899999999999999999999999999999
Q ss_pred CHhhHHHHHHcCCeEEEECCC
Q 023109 174 SVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 174 s~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+.+|+.+|+++|+.++++.++
T Consensus 100 ~~~di~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 100 SILNVRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp CHHHHHHHHHHTCEEEECSCH
T ss_pred CHHHHHHHHHCCCEEEEeCCh
Confidence 999999999999999998873
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.5e-21 Score=173.18 Aligned_cols=186 Identities=15% Similarity=0.154 Sum_probs=129.8
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-H-HHhC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-H-KIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
.+++|+|+||+||||++++.. ..+.+..|........ . ...+ ....+.+......+.. ...+.
T Consensus 182 ~~~~k~viFD~DgTLi~~~~~-----~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~-~~~~~-------- 247 (415)
T 3p96_A 182 RRAKRLIVFDVDSTLVQGEVI-----EMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLAG-LPATV-------- 247 (415)
T ss_dssp TTCCCEEEECTBTTTBSSCHH-----HHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTTTT-CBTHH--------
T ss_pred ccCCcEEEEcCcccCcCCchH-----HHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHhcC-CCHHH--------
Confidence 456899999999999998642 3344444442211111 1 1111 1233333333332211 11111
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceee-------c---cCCcCCCCCCHH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIV-------G---SDEVRTGKPSPD 152 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~-------~---~~~~~~~kp~~~ 152 (287)
+.......+++||+.++++.++++|++++++||+....++..+ +.+|+..+|+..+ + .++....||+++
T Consensus 248 ~~~~~~~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~ 326 (415)
T 3p96_A 248 IDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLA-EELMLDYVAANELEIVDGTLTGRVVGPIIDRAGKAT 326 (415)
T ss_dssp HHHHHHHCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred HHHHHHhCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HHcCccceeeeeEEEeCCEEEeeEccCCCCCcchHH
Confidence 1112234689999999999999999999999999999999999 8899987776432 1 234556899999
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
.+.++++.+|++|++|+||||+.+|+.+++++|+.+++ +. .+..+..+++++.+
T Consensus 327 ~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~-~~---~~~~~~~ad~~i~~ 380 (415)
T 3p96_A 327 ALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF-NA---KPALREVADASLSH 380 (415)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SC---CHHHHHHCSEEECS
T ss_pred HHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE-CC---CHHHHHhCCEEEcc
Confidence 99999999999999999999999999999999998887 33 44556677877653
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=99.85 E-value=5.2e-22 Score=160.98 Aligned_cols=128 Identities=20% Similarity=0.258 Sum_probs=107.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCccccceee-cc-----------
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNESFSVIV-GS----------- 141 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~~fd~i~-~~----------- 141 (287)
..++.||+.++|++|+++|++++++||++. ..+...+ +.+|+. |+.++ +.
T Consensus 54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--~~~~~~~~~~~~g~~~~~~ 130 (218)
T 2o2x_A 54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGVF--VDMVLACAYHEAGVGPLAI 130 (218)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCCTTCCSTTCC
T ss_pred cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHH-HHcCCc--eeeEEEeecCCCCceeecc
Confidence 457889999999999999999999999988 6777788 777874 56544 32
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeE-EEECCCCCccc-cccCCcEEeCCccCcCcccc
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTH-RYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~-i~v~~~~~~~~-~~~~a~~v~~~l~el~~~~~ 219 (287)
++....||+|..|..+++.++++|++++||||+.+|+.+|+++|+.+ +++.++..... ....++++++++.++...+.
T Consensus 131 ~~~~~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~~~~i~~l~el~~~l~ 210 (218)
T 2o2x_A 131 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFAIRPLRDSSELGDLLAAIE 210 (218)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEEEEEESSHHHHHHHHHHHH
T ss_pred cCCccCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCcccccCCCCEecccHHHHHHHHH
Confidence 56678999999999999999999999999999999999999999999 99988754433 23467888899888866553
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.1e-21 Score=154.52 Aligned_cols=189 Identities=20% Similarity=0.128 Sum_probs=121.4
Q ss_pred cCCccEEE-EecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-HhCC-CHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Q 023109 6 KKLMSCVI-LDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGK-TPLEEAAIIVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 6 ~~~~k~ii-fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
+.+++.++ ||+||||++++ .+..+.+.+|.......... ..+. ...+.......... .... +.
T Consensus 5 ~~~mk~ivifDlDGTL~d~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~ 70 (201)
T 4ap9_A 5 PQFMKKVAVIDIEGTLTDFE-----FWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGLIR-GIDE--------GT 70 (201)
T ss_dssp CGGGSCEEEEECBTTTBCCC-----HHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHHTT-TCBH--------HH
T ss_pred hHhcceeEEecccCCCcchH-----HHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHHhc-CCCH--------HH
Confidence 34456666 99999999987 45566666666111111111 1111 12222222111111 0011 12
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcC-CCCCCHHHHHHHHHHc
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVR-TGKPSPDIFLEAAKRL 161 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~-~~kp~~~~~~~~~~~l 161 (287)
+.......++.|++.++++.+++.|++++++|+++...++.. +.+|+..+++.+...++.. ..+|.+.....+++.+
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l~~l 148 (201)
T 4ap9_A 71 FLRTREKVNVSPEARELVETLREKGFKVVLISGSFEEVLEPF--KELGDEFMANRAIFEDGKFQGIRLRFRDKGEFLKRF 148 (201)
T ss_dssp HHHGGGGCCCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG--TTTSSEEEEEEEEEETTEEEEEECCSSCHHHHHGGG
T ss_pred HHHHHHhCCCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH--HHcCchhheeeEEeeCCceECCcCCccCHHHHHHhc
Confidence 233345678999999999999999999999999987776644 6678877666555444321 1344444455666666
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcccc
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~ 219 (287)
+|++|++|||+.+|+++++.+|+.+++.+... .++++++++.++...+.
T Consensus 149 --~~~~~i~iGD~~~Di~~~~~ag~~v~~~~~~~-------~ad~v~~~~~el~~~l~ 197 (201)
T 4ap9_A 149 --RDGFILAMGDGYADAKMFERADMGIAVGREIP-------GADLLVKDLKELVDFIK 197 (201)
T ss_dssp --TTSCEEEEECTTCCHHHHHHCSEEEEESSCCT-------TCSEEESSHHHHHHHHH
T ss_pred --CcCcEEEEeCCHHHHHHHHhCCceEEECCCCc-------cccEEEccHHHHHHHHH
Confidence 89999999999999999999999865554422 78999999998765543
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=149.14 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=92.7
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCC-hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSH-RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~-~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
..++.||+.++|+.++++|++++++||++ ...++..+ +.+|+..+|+.++.. .+|+++.|..+++.+|++|++
T Consensus 66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l-~~~gl~~~f~~~~~~-----~~~k~~~~~~~~~~~~~~~~~ 139 (187)
T 2wm8_A 66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLL-ELFDLFRYFVHREIY-----PGSKITHFERLQQKTGIPFSQ 139 (187)
T ss_dssp EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHH-HHTTCTTTEEEEEES-----SSCHHHHHHHHHHHHCCCGGG
T ss_pred ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHH-HHcCcHhhcceeEEE-----eCchHHHHHHHHHHcCCChHH
Confidence 56789999999999999999999999998 68888888 889999999987543 257789999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCCCc
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~ 197 (287)
|++|||+.+|+.+|+++|+.++++..+...
T Consensus 140 ~~~igD~~~Di~~a~~aG~~~i~v~~g~~~ 169 (187)
T 2wm8_A 140 MIFFDDERRNIVDVSKLGVTCIHIQNGMNL 169 (187)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECSSSCCH
T ss_pred EEEEeCCccChHHHHHcCCEEEEECCCCCh
Confidence 999999999999999999999999886543
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-21 Score=169.63 Aligned_cols=198 Identities=18% Similarity=0.183 Sum_probs=144.5
Q ss_pred cCCcccccHHHHHHHHHHHHHH-cCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHH------HHHhh--
Q 023109 16 LDGTLLNTDGMFSEVLKTFLVK-YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYS------MFSDH-- 86 (287)
Q Consensus 16 lDGTL~d~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-- 86 (287)
+|||....+. +...+.++.++ .++.. +......|.+..+....+...++.+ .....+.. .....
T Consensus 137 fD~t~~~~d~-i~~~l~~~a~~~~~i~~--~~~~~~~G~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 209 (384)
T 1qyi_A 137 LDNVKVGKNN-IYAALEEFATTELHVSD--ATLFSLKGALWTLAQEVYQEWYLGS----KLYEDVEKKIARTTFKTGYIY 209 (384)
T ss_dssp HTTCCSSHHH-HHHHHHHHHHHHTTCSC--CGGGSTTCHHHHHHHHHHHHHHHHH----HHHHHHHCSCCSCSSCCCTTT
T ss_pred hcCCCccHHH-HHHHHHHHHHHhCCCCH--HHHHHhcCCCHHHHHHHHHHHcCCc----cCHHHHHhHHHHHHHHHHHHh
Confidence 3777765544 34566666653 45543 2234566666666666666554311 11111100 00000
Q ss_pred -hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc--eeeccCCcC-----------CCCCCHH
Q 023109 87 -LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS--VIVGSDEVR-----------TGKPSPD 152 (287)
Q Consensus 87 -~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd--~i~~~~~~~-----------~~kp~~~ 152 (287)
....+++||+.++|+.|+++|++++++||++...+...+ +++|+..+|+ .++++++.. ..||+|+
T Consensus 210 ~~~~~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L-~~lgL~~~Fd~~~Ivs~ddv~~~~~~~~~~kp~~KP~P~ 288 (384)
T 1qyi_A 210 QEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPF 288 (384)
T ss_dssp TCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTH
T ss_pred hccCCCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHH-HHcCChHhcCCCEEEecccccccccccccccCCCCCCHH
Confidence 124578899999999999999999999999999999999 8889999999 888887754 4899999
Q ss_pred HHHHHHHHcC--------------CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc----ccc-ccCCcEEeCCccC
Q 023109 153 IFLEAAKRLN--------------MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ----THR-YTAADEVINSLLD 213 (287)
Q Consensus 153 ~~~~~~~~l~--------------~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~----~~~-~~~a~~v~~~l~e 213 (287)
.|..+++.++ ++|++|+||||+.+|+.+|+++|+.++++..+... ... ...++++++++.+
T Consensus 289 ~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~g~~~~~~~~~l~~~~ad~vi~sl~e 368 (384)
T 1qyi_A 289 SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGE 368 (384)
T ss_dssp HHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGG
T ss_pred HHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECCCccccccHHHHhhcCCCEEECCHHH
Confidence 9999999999 89999999999999999999999999999886532 122 3468999999999
Q ss_pred cCccccCC
Q 023109 214 LRPEKWGL 221 (287)
Q Consensus 214 l~~~~~~~ 221 (287)
+...+...
T Consensus 369 L~~~l~~~ 376 (384)
T 1qyi_A 369 LRGVLDNL 376 (384)
T ss_dssp HHHHHSCT
T ss_pred HHHHHHHH
Confidence 97765443
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=7.2e-23 Score=162.92 Aligned_cols=172 Identities=12% Similarity=0.191 Sum_probs=123.1
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCC-CCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKE-WDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (287)
.++|+||+||||+|+...+..+++++++ |.+ .+.+.+... .....+. .. .+ +....+.+.+.+.
T Consensus 2 ~k~viFDlDGTL~Ds~~~~~~~~~~~~~--g~~~~~~~~~~~~---~~~~~~~----~~-~~----~~~~~~~~~~~~~~ 67 (193)
T 2i7d_A 2 SVRVLVDMDGVLADFEAGLLRGFRRRFP--EEPHVPLEQRRGF---LAREQYR----AL-RP----DLADKVASVYEAPG 67 (193)
T ss_dssp CEEEEECSBTTTBCHHHHHHHHHHHHST--TSCCCCGGGCCSS---CHHHHHH----HH-CT----THHHHHHHHHTSTT
T ss_pred CcEEEEECCCcCccchhHHHHHHHHHhc--CCCCCCHHHHHHh---hHHHHHH----HH-hH----HHHHHHHHHHHhcC
Confidence 4789999999999999988888888776 654 343333222 1122222 21 11 1233444444443
Q ss_pred -hccCCCCCcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCC
Q 023109 87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNME 164 (287)
Q Consensus 87 -~~~~~~~~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~ 164 (287)
....+++||+.++|+.|+++ |++++++||++...++..+ +++|+ |+.++++ .+++.+|++
T Consensus 68 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~gl---f~~i~~~--------------~~~~~~~~~ 129 (193)
T 2i7d_A 68 FFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVG-EKYRW---VEQHLGP--------------QFVERIILT 129 (193)
T ss_dssp TTTTCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHH-HHHHH---HHHHHCH--------------HHHTTEEEC
T ss_pred ccccCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHH-HHhCc---hhhhcCH--------------HHHHHcCCC
Confidence 23678899999999999999 9999999999988888888 77787 8877754 268889999
Q ss_pred CCcEEEEeCCHhh----HHHHH-HcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 165 PSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 165 ~~~~l~iGDs~~D----v~~a~-~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
|++|+||||+.+| +.+|+ ++|+.+++++.++...........++.++.
T Consensus 130 ~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~ 182 (193)
T 2i7d_A 130 RDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTCCHNRHLVLPPTRRRLLSWS 182 (193)
T ss_dssp SCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECCGGGTTCCCCTTSCEECSTT
T ss_pred cccEEEECCchhhCcHHHhhcccccccceEEEEeccCcccccccchHHHhhHH
Confidence 9999999999988 99999 999999999875433322112233566663
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=99.83 E-value=4e-22 Score=159.13 Aligned_cols=178 Identities=15% Similarity=0.192 Sum_probs=127.3
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh-
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH- 86 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 86 (287)
++++|+||+||||+|+...+..+++++++++ ...+.+. ..+.+..+.+.. .. .+.. ..+.+.+.+.
T Consensus 3 ~~k~viFDlDGTL~Ds~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~----~~----~~~~-~~~~~~~~~~~ 69 (197)
T 1q92_A 3 RALRVLVDMDGVLADFEGGFLRKFRARFPDQ-PFIALED---RRGFWVSEQYGR----LR----PGLS-EKAISIWESKN 69 (197)
T ss_dssp CCEEEEECSBTTTBCHHHHHHHHHHHHCTTS-CCCCGGG---CCSSCHHHHHHH----HS----TTHH-HHHHHHHTSTT
T ss_pred CceEEEEeCCCCCccCcHHHHHHHHHHHhcC-CCCCHHH---hcCCcHHHHHHh----cC----HHHH-HHHHHHHHhhh
Confidence 4689999999999999999989998888766 2233332 223333333222 21 1111 2222333332
Q ss_pred -hccCCCCCcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCcc-ccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 87 -LCKVKALPGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNE-SFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 87 -~~~~~~~~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~gl~~-~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
....+++||+.++|+.|+++ |++++++||++...++..+ +++|+.. +|+ ..+++.+++
T Consensus 70 ~~~~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l-~~~~l~~~~f~------------------~~~~~~l~~ 130 (197)
T 1q92_A 70 FFFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPY-EKYAWVEKYFG------------------PDFLEQIVL 130 (197)
T ss_dssp TTTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHH-HHHHHHHHHHC------------------GGGGGGEEE
T ss_pred hhhcCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHH-HHhchHHHhch------------------HHHHHHhcc
Confidence 23578899999999999999 9999999999988877777 7778877 775 456788999
Q ss_pred CCCcEEEEeCCHhh----HHHHH-HcCCeEEEECCCCCccccccCCcEEeCCcc-CcCcc
Q 023109 164 EPSSSLVIEDSVIG----VVAGK-AAGMEVVAVPSLPKQTHRYTAADEVINSLL-DLRPE 217 (287)
Q Consensus 164 ~~~~~l~iGDs~~D----v~~a~-~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~-el~~~ 217 (287)
+|++|++|||+..| +.+|+ ++|+.+++++.++...........++.++. ++...
T Consensus 131 ~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~~~~~~~~~~~~~~~v~~~~~~l~~~ 190 (197)
T 1q92_A 131 TRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAI 190 (197)
T ss_dssp CSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHH
T ss_pred CCccEEEECcccccCCchhhhcccCCCceEEEecCcccccccccccchhhhhHHHHHHHH
Confidence 99999999999988 99999 999999999886554322222345688874 55433
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-21 Score=149.91 Aligned_cols=103 Identities=17% Similarity=0.228 Sum_probs=89.6
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCC---------------ChHHHHHHHHhhcCCccccceeecc-----CCcCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNS---------------HRATIESKISYQHGWNESFSVIVGS-----DEVRTGK 148 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~---------------~~~~~~~~l~~~~gl~~~fd~i~~~-----~~~~~~k 148 (287)
..+++||+.++|+.|+++|++++++||+ ....++..+ +.+|+. |+.++.+ ++....|
T Consensus 40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gl~--fd~v~~s~~~~~~~~~~~K 116 (176)
T 2fpr_A 40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQ--FDEVLICPHLPADECDCRK 116 (176)
T ss_dssp GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHH-HHTTCC--EEEEEEECCCGGGCCSSST
T ss_pred HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHH-HHcCCC--eeEEEEcCCCCcccccccC
Confidence 4678999999999999999999999998 566777788 888886 8888654 7788899
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
|+|+.|..+++.++++|++|+||||+.+|+.+|+++|+.++++..+
T Consensus 117 P~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~ 162 (176)
T 2fpr_A 117 PKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 162 (176)
T ss_dssp TSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred CCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence 9999999999999999999999999999999999999999999885
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-21 Score=149.67 Aligned_cols=108 Identities=16% Similarity=0.142 Sum_probs=90.4
Q ss_pred CCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEe
Q 023109 93 LPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (287)
Q Consensus 93 ~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iG 172 (287)
.|+..++|+.++++|++++++||++...++..+ +++|+..+|+. .||+++.+.++++.++++|++++|||
T Consensus 38 ~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l-~~~gl~~~~~~---------~kp~~~~~~~~~~~~~~~~~~~~~vG 107 (162)
T 2p9j_A 38 NVLDGIGIKLLQKMGITLAVISGRDSAPLITRL-KELGVEEIYTG---------SYKKLEIYEKIKEKYSLKDEEIGFIG 107 (162)
T ss_dssp EHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHH-HHTTCCEEEEC---------C--CHHHHHHHHHHTTCCGGGEEEEE
T ss_pred cccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHH-HHcCCHhhccC---------CCCCHHHHHHHHHHcCCCHHHEEEEC
Confidence 345678999999999999999999999999899 88888766643 68999999999999999999999999
Q ss_pred CCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 173 Ds~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
|+.+|+.+++.+|+.+++.+. .+.....+++++++..+
T Consensus 108 D~~~Di~~a~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 108 DDVVDIEVMKKVGFPVAVRNA---VEEVRKVAVYITQRNGG 145 (162)
T ss_dssp CSGGGHHHHHHSSEEEECTTS---CHHHHHHCSEECSSCSS
T ss_pred CCHHHHHHHHHCCCeEEecCc---cHHHHhhCCEEecCCCC
Confidence 999999999999998775432 33445568899888775
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-21 Score=163.09 Aligned_cols=122 Identities=17% Similarity=0.196 Sum_probs=84.6
Q ss_pred CcHHHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCccccc---eeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 94 PGANRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESFS---VIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 94 ~g~~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd---~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
+++.+.++.+++. |+++ ++|+.+........ ...++..+|+ ...+.+....+||+|..+..+++.+|+++++|+
T Consensus 134 ~~~~~~l~~l~~~~~~~~-i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~i 211 (271)
T 2x4d_A 134 QNMNNAFQVLMELEKPVL-ISLGKGRYYAATSG-LMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAV 211 (271)
T ss_dssp HHHHHHHHHHHHCSSCCE-EEECCCSEEEETTE-EEECHHHHHHHHHHHHTCCCEEESTTCHHHHHHHHHHHTCCGGGEE
T ss_pred HHHHHHHHHHHhcCCCeE-EEEcCCcccccCCC-cccChhHHHHHHHHHhCCceeeccCCCHHHHHHHHHHhCCCcceEE
Confidence 3555666666665 6666 55544332211111 2222222232 334455567799999999999999999999999
Q ss_pred EEeCCH-hhHHHHHHcCCeEEEECCCCCc-cc-c--ccCCcEEeCCccCcCcc
Q 023109 170 VIEDSV-IGVVAGKAAGMEVVAVPSLPKQ-TH-R--YTAADEVINSLLDLRPE 217 (287)
Q Consensus 170 ~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~-~~-~--~~~a~~v~~~l~el~~~ 217 (287)
+|||+. ||+.+++.+|+.++++.++... .. . ...++++++++.++...
T Consensus 212 ~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~el~~~ 264 (271)
T 2x4d_A 212 MIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDL 264 (271)
T ss_dssp EEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGCSSCCCSEEESSHHHHHHH
T ss_pred EECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcccCCCCCEEeCCHHHHHHH
Confidence 999999 9999999999999999987332 22 1 24589999999887543
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=159.84 Aligned_cols=116 Identities=20% Similarity=0.221 Sum_probs=99.0
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeec----------cCCcCCCCCCHHHHHHH
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVG----------SDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~----------~~~~~~~kp~~~~~~~~ 157 (287)
...+++||+.++++.+++.|++++++|++....++..+ +.+|+..+|+..+. +++....||+|+.+.++
T Consensus 175 ~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~-~~lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~~~~~~~ 253 (335)
T 3n28_A 175 ETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLK-EQLSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKADILLTL 253 (335)
T ss_dssp TTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEESCCCCHHHHHHHHHHH
T ss_pred HhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-HHcCCCeEEeeeeEeeCCeeeeeecccccChhhhHHHHHHH
Confidence 45789999999999999999999999999999999888 88899877765431 23556679999999999
Q ss_pred HHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 158 AKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 158 ~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
++.+|++|++|++|||+.||+++++.+|+.+++ +. .+..+..+++++
T Consensus 254 ~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~-~~---~~~~~~~a~~v~ 300 (335)
T 3n28_A 254 AQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY-HA---KPKVEAKAQTAV 300 (335)
T ss_dssp HHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE-SC---CHHHHTTSSEEE
T ss_pred HHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe-CC---CHHHHhhCCEEE
Confidence 999999999999999999999999999998887 33 344556677766
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=9.9e-22 Score=164.40 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=96.8
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHH---HHHhhcCCccccceeeccCC-cCCCCCCHHHHHHHHHHcCCCCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIES---KISYQHGWNESFSVIVGSDE-VRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~---~l~~~~gl~~~fd~i~~~~~-~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
.+++++.++++.+ +.|+++ ++||.+...... .. +..++..+|+.+++++. ...+||+|..+..+++.+|++|+
T Consensus 137 ~~~~~~~~~l~~l-~~~~~~-i~tn~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~kpk~~~~~~~~~~lgi~~~ 213 (271)
T 1vjr_A 137 LTYERLKKACILL-RKGKFY-IATHPDINCPSKEGPVP-DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKE 213 (271)
T ss_dssp CCHHHHHHHHHHH-TTTCEE-EESCCCSEECCTTSCEE-CHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGG
T ss_pred cCHHHHHHHHHHH-HCCCeE-EEECCCccccCCCCccc-cccHHHHHHHHHhCCCCcccCCCCCHHHHHHHHHHhCCCCc
Confidence 4568889999999 778887 888876543211 11 23345556787777787 88999999999999999999999
Q ss_pred cEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc-c---cCCcEEeCCccCcCc
Q 023109 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLRP 216 (287)
Q Consensus 167 ~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~-~---~~a~~v~~~l~el~~ 216 (287)
+|++|||++ +|+.+++.+|+.++++.++...... . ..++++++++.++..
T Consensus 214 e~i~iGD~~~nDi~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~i~~l~el~~ 268 (271)
T 1vjr_A 214 RMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAK 268 (271)
T ss_dssp GEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHH
Confidence 999999995 9999999999999999987544322 1 368999999988754
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-20 Score=158.24 Aligned_cols=193 Identities=16% Similarity=0.193 Sum_probs=131.4
Q ss_pred CccEEEEecCCcccccHHHHH----------------------------HHHHHHHHHcCCCC-CHHHHHHHhCCCHHH-
Q 023109 8 LMSCVILDLDGTLLNTDGMFS----------------------------EVLKTFLVKYGKEW-DGREKHKIVGKTPLE- 57 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~----------------------------~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~- 57 (287)
++++|+||+||||+++...+. .++..+++++|... +.+.+....|.+...
T Consensus 31 ~i~~viFD~dGTL~ds~~~~~~~~~~~~~~~~~l~~~~~~e~~s~hp~~~a~~~~~~~~g~~~~~~~~~~~~~G~~~~~~ 110 (287)
T 3a1c_A 31 KVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVAD 110 (287)
T ss_dssp HCCEEEEECCCCCBCSCCEEEEEEESSSCHHHHHHHHHHHTTTCCSHHHHHHHHHHHHTTCCCCCCSCEEEETTTEEEET
T ss_pred cCCEEEEeCCCCCcCCCEEEEEEEeCCCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCCCccccccceeecCCCeEEE
Confidence 579999999999999966553 77888888888753 223332333332111
Q ss_pred -H---HHHHHHHhCCCCCHHHHHHHHHHHHHh------------h-----hccCCCCCcHHHHHHHHHHCCCCEEEEeCC
Q 023109 58 -E---AAIIVEDYGLPCAKHEFVNEVYSMFSD------------H-----LCKVKALPGANRLIKHLSCHGVPMALASNS 116 (287)
Q Consensus 58 -~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~ 116 (287)
. ...+....+.+.. +.+. .+.+.+.. . ....+++||+.++|+.|+++|++++++|++
T Consensus 111 ~~~~g~~~~~~~~~~~~~-~~~~-~~~~~~~~~g~~~i~~~~d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~ 188 (287)
T 3a1c_A 111 GILVGNKRLMEDFGVAVS-NEVE-LALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGD 188 (287)
T ss_dssp TEEEECHHHHHHTTCCCC-HHHH-HHHHHHHHTTCEEEEEEETTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEECCHHHHHhcCCCcc-HHHH-HHHHHHHhCCCeEEEEEECCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCC
Confidence 0 0011222222211 1121 22222221 0 124688999999999999999999999999
Q ss_pred ChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCC
Q 023109 117 HRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (287)
Q Consensus 117 ~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~ 196 (287)
+...++..+ +.+|+..+|+.++. .++ ..+++.++.. ++|++|||+.+|+.+++++|+.+.+. .+
T Consensus 189 ~~~~~~~~l-~~~gl~~~f~~i~~-------~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~~v~~~-~~-- 252 (287)
T 3a1c_A 189 NWRSAEAIS-RELNLDLVIAEVLP-------HQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SG-- 252 (287)
T ss_dssp CHHHHHHHH-HHHTCSEEECSCCT-------TCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSEEEEEC-CC--
T ss_pred CHHHHHHHH-HHhCCceeeeecCh-------HHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCeeEEeC-CC--
Confidence 999999898 88899888876641 222 6788899998 99999999999999999999985443 22
Q ss_pred ccccccCCcEEe--CCccCcCccc
Q 023109 197 QTHRYTAADEVI--NSLLDLRPEK 218 (287)
Q Consensus 197 ~~~~~~~a~~v~--~~l~el~~~~ 218 (287)
.+.....+++++ +++.++...+
T Consensus 253 ~~~~~~~ad~v~~~~~~~~l~~~l 276 (287)
T 3a1c_A 253 SDVAVESGDIVLIRDDLRDVVAAI 276 (287)
T ss_dssp SCCSSCCSSEEESSSCTHHHHHHH
T ss_pred CHHHHhhCCEEEeCCCHHHHHHHH
Confidence 233456789999 8888776544
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=99.80 E-value=6.9e-20 Score=147.55 Aligned_cols=98 Identities=13% Similarity=0.146 Sum_probs=81.0
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc-C--CcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-D--EVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~-~--~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
+.|++.++++.|+++|++++++||++...++..+ +. +.++|+.++.+ + .....||+|+.+.++++++|+ |
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l-~~--l~~~f~~i~~~~~~~~~~~~KP~p~~~~~~~~~~g~----~ 161 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVS-KT--LADNFHIPATNMNPVIFAGDKPGQNTKSQWLQDKNI----R 161 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHH-HH--HHHHTTCCTTTBCCCEECCCCTTCCCSHHHHHHTTE----E
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHH-HH--HHHhcCccccccchhhhcCCCCCHHHHHHHHHHCCC----E
Confidence 5679999999999999999999999876555555 33 44567766332 2 345689999999999999998 9
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEECCCCC
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPK 196 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v~~~~~ 196 (287)
+||||+.+|+.+|+++|+.++++..+..
T Consensus 162 l~VGDs~~Di~aA~~aG~~~i~v~~g~~ 189 (211)
T 2b82_A 162 IFYGDSDNDITAARDVGARGIRILRASN 189 (211)
T ss_dssp EEEESSHHHHHHHHHTTCEEEECCCCTT
T ss_pred EEEECCHHHHHHHHHCCCeEEEEecCCC
Confidence 9999999999999999999999988643
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-21 Score=161.89 Aligned_cols=195 Identities=16% Similarity=0.169 Sum_probs=126.2
Q ss_pred cCCccEEEEecCCcccc----------------------------cHHHHHHHHHHHHHHcCCCCCH-HHHHHHhCCCHH
Q 023109 6 KKLMSCVILDLDGTLLN----------------------------TDGMFSEVLKTFLVKYGKEWDG-REKHKIVGKTPL 56 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d----------------------------~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~ 56 (287)
++++|+|+||+||||++ +...+..++.+++++.|..... .......+....
T Consensus 10 ~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~ 89 (280)
T 3skx_A 10 AKDLQAVIFDKTGTLTEGRFGVTDIVGFNHSEDELLQIAASLEARSEHPIAAAIVEEAEKRGFGLTEVEEFRAIPGKGVE 89 (280)
T ss_dssp GGGCCEEEEECCCCCEEEEEEEEEEEESSSCHHHHHHHHHHHHTTCCSHHHHHHHHHHHHTTCCCCCCEEEEEETTTEEE
T ss_pred hcCCCEEEEeCCCcCCCCcEEEEEEEecCCCHHHHHHHHHHhhccCCCHHHHHHHHHHHhcCCCCCCccceeecCCCEEE
Confidence 45789999999999999 8777888888888888765322 111122222111
Q ss_pred HH---------HHHHHHHhCCCCCHHHHHHHHHHHHHhhh-----c--------cCCCCCcHHHHHHHHHHCCCCEEEEe
Q 023109 57 EE---------AAIIVEDYGLPCAKHEFVNEVYSMFSDHL-----C--------KVKALPGANRLIKHLSCHGVPMALAS 114 (287)
Q Consensus 57 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~~~g~~~~l~~l~~~g~~v~l~T 114 (287)
.. ...+....+.... ... ..+........ . ..+++||+.++|+.++++|++++++|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T 167 (280)
T 3skx_A 90 GIVNGRRYMVVSPGYIRELGIKTD-ESV-EKLKQQGKTVVFILKNGEVSGVIALADRIRPESREAISKLKAIGIKCMMLT 167 (280)
T ss_dssp EEETTEEEEEECHHHHHHTTCCCC-TTH-HHHHTTTCEEEEEEETTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEEC
T ss_pred EEECCEEEEEecHHHHHHcCCCch-HHH-HHHHhCCCeEEEEEECCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEe
Confidence 00 0122333333211 111 11111000000 0 01688999999999999999999999
Q ss_pred CCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 115 NSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 115 ~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+.+...++..+ +.+|+..+|+.+++.+.....| ...+.+ +|++|||+.||+++++.||+.+++.+
T Consensus 168 ~~~~~~~~~~~-~~~gl~~~f~~~~~~~k~~~~k-------~~~~~~-----~~~~vGD~~nDi~~~~~Ag~~va~~~-- 232 (280)
T 3skx_A 168 GDNRFVAKWVA-EELGLDDYFAEVLPHEKAEKVK-------EVQQKY-----VTAMVGDGVNDAPALAQADVGIAIGA-- 232 (280)
T ss_dssp SSCHHHHHHHH-HHHTCSEEECSCCGGGHHHHHH-------HHHTTS-----CEEEEECTTTTHHHHHHSSEEEECSC--
T ss_pred CCCHHHHHHHH-HHcCChhHhHhcCHHHHHHHHH-------HHHhcC-----CEEEEeCCchhHHHHHhCCceEEecC--
Confidence 99999999998 8889999999887765332222 222222 79999999999999999997555433
Q ss_pred CCccccccCCcEEe--CCccCcCccc
Q 023109 195 PKQTHRYTAADEVI--NSLLDLRPEK 218 (287)
Q Consensus 195 ~~~~~~~~~a~~v~--~~l~el~~~~ 218 (287)
..+.....+++++ +++.++...+
T Consensus 233 -~~~~~~~~a~~~~~~~~~~~l~~~l 257 (280)
T 3skx_A 233 -GTDVAVETADIVLVRNDPRDVAAIV 257 (280)
T ss_dssp -CSSSCCCSSSEECSSCCTHHHHHHH
T ss_pred -CcHHHHhhCCEEEeCCCHHHHHHHH
Confidence 3445556677777 7777765443
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-19 Score=140.61 Aligned_cols=100 Identities=11% Similarity=0.045 Sum_probs=86.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
.++.++++|++++++||.+...++..+ +++|+..+|+. .||+|+.+.++++.++++|++|+||||+.+|+
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~~~~---------~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 108 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRA-EKLKVDYLFQG---------VVDKLSAAEELCNELGINLEQVAYIGDDLNDA 108 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHH-HHTTCSEEECS---------CSCHHHHHHHHHHHHTCCGGGEEEECCSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHH-HHcCCCEeecc---------cCChHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 789999999999999999999999999 88898766654 39999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
.+++++|+.+++.+. .+..+..+++++.+.
T Consensus 109 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~ 138 (164)
T 3e8m_A 109 KLLKRVGIAGVPASA---PFYIRRLSTIFLEKR 138 (164)
T ss_dssp HHHTTSSEEECCTTS---CHHHHTTCSSCCCCC
T ss_pred HHHHHCCCeEEcCCh---HHHHHHhCcEEeccC
Confidence 999999997776443 344556677777763
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.1e-20 Score=149.33 Aligned_cols=101 Identities=15% Similarity=0.131 Sum_probs=88.4
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
+|+.|+++|++++++|+.+...++..+ +.+|+..+|+.+ ||+++.++++++.+|++|++|++|||+.+|+
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l-~~lgi~~~f~~~---------k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi 153 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRA-NTLGITHLYQGQ---------SDKLVAYHELLATLQCQPEQVAYIGDDLIDW 153 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCCEEECSC---------SSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCchhhccc---------CChHHHHHHHHHHcCcCcceEEEEcCCHHHH
Confidence 899999999999999999999999999 888987776643 8889999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
++++++|+.+++.+. .+..+..+++++.+..
T Consensus 154 ~~~~~ag~~~a~~~~---~~~~~~~Ad~v~~~~~ 184 (211)
T 3ij5_A 154 PVMAQVGLSVAVADA---HPLLLPKAHYVTRIKG 184 (211)
T ss_dssp HHHTTSSEEEECTTS---CTTTGGGSSEECSSCT
T ss_pred HHHHHCCCEEEeCCc---cHHHHhhCCEEEeCCC
Confidence 999999988775543 4455677899988774
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-21 Score=160.52 Aligned_cols=119 Identities=18% Similarity=0.276 Sum_probs=99.1
Q ss_pred cHHHHHHHHHHCCCCEEEEeCCChHHH--HH-HHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHc----CCCCCc
Q 023109 95 GANRLIKHLSCHGVPMALASNSHRATI--ES-KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL----NMEPSS 167 (287)
Q Consensus 95 g~~~~l~~l~~~g~~v~l~T~~~~~~~--~~-~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l----~~~~~~ 167 (287)
...++++.|+++|++ +++||.+.... .. .+....++..+|+.++++++....||+|+.|..+++++ |++|++
T Consensus 149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~~~~ 227 (284)
T 2hx1_A 149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRRFIRFGKPDSQMFMFAYDMLRQKMEISKRE 227 (284)
T ss_dssp HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSCEEEESTTSSHHHHHHHHHHHTTSCCCGGG
T ss_pred cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCceeEecCCCHHHHHHHHHHHhhccCCCcce
Confidence 667777789999999 99999977654 21 11144567778999999998889999999999999999 999999
Q ss_pred EEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc-c-------cCCcEEeCCccCc
Q 023109 168 SLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y-------TAADEVINSLLDL 214 (287)
Q Consensus 168 ~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~-~-------~~a~~v~~~l~el 214 (287)
|+||||++ +|+.+|+++|+.++++.++...... . ..++++++++.++
T Consensus 228 ~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~~~~~~pd~~~~~l~el 283 (284)
T 2hx1_A 228 ILMVGDTLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKSTGIVPTHICESAVIE 283 (284)
T ss_dssp EEEEESCTTTHHHHHHHHTCEEEEESSSSSCGGGHHHHHHHHTCCCSEEESCSCCC
T ss_pred EEEECCCcHHHHHHHHHcCCeEEEECCCCCCHHHHHhhhhccCCCCCEEccchhhh
Confidence 99999996 9999999999999999987554322 2 4689999999886
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-21 Score=153.42 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=84.3
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
+|+.|+++|++++++|+.+...++..+ +.+|+. ++.+ .||+++.+.++++.+++++++++||||+.+|+
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgi~-----~~~~-----~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~ 115 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARA-RKLKIP-----VLHG-----IDRKDLALKQWCEEQGIAPERVLYVGNDVNDL 115 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHH-HHHTCC-----EEES-----CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHH-HHcCCe-----eEeC-----CCChHHHHHHHHHHcCCCHHHEEEEcCCHHHH
Confidence 899999999999999999999999898 888885 2322 38999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
++++.+|+.+++.+. .+..+..+++++.+
T Consensus 116 ~~~~~ag~~v~~~~~---~~~~~~~ad~v~~~ 144 (176)
T 3mmz_A 116 PCFALVGWPVAVASA---HDVVRGAARAVTTV 144 (176)
T ss_dssp HHHHHSSEEEECTTC---CHHHHHHSSEECSS
T ss_pred HHHHHCCCeEECCCh---hHHHHHhCCEEecC
Confidence 999999987665443 34456778999988
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-19 Score=143.08 Aligned_cols=100 Identities=15% Similarity=0.150 Sum_probs=86.8
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
+|+.|+++|++++++|+.+...++..+ +++|+..+|+.+ ++||+.+.++++.+|++|++|++|||+.+|+
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~lgl~~~f~~~---------~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRA-KSLGIEHLFQGR---------EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHHTCSEEECSC---------SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHH-HHcCCHHHhcCc---------CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 889999999999999999999999999 889998777754 6778999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
++++++|+.+++.+. .+.....+++++.+.
T Consensus 124 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~ 153 (189)
T 3mn1_A 124 PVIRRVGLGMAVANA---ASFVREHAHGITRAQ 153 (189)
T ss_dssp HHHHHSSEEEECTTS---CHHHHHTSSEECSSC
T ss_pred HHHHHCCCeEEeCCc---cHHHHHhCCEEecCC
Confidence 999999987765442 344566788888874
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-20 Score=161.25 Aligned_cols=127 Identities=17% Similarity=0.257 Sum_probs=103.9
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHH--H-HHHHhhcC-CccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATI--E-SKISYQHG-WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~--~-~~l~~~~g-l~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
.++|++.++++.+++.|+ ++++||.+.... . ..+ ...| +..+|+.+++++....+||+|..|..+++.+|++|+
T Consensus 156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~-~~~g~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~lgi~~~ 233 (306)
T 2oyc_A 156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT-PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPA 233 (306)
T ss_dssp CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEE-ECHHHHHHHHHHHHTCCCEECSTTSTHHHHHHHHHSCCCGG
T ss_pred CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcC-CCCcHHHHHHHHHhCCCceeeCCCCHHHHHHHHHHcCCChH
Confidence 456899999999999888 999999876543 1 222 3334 566788888888888999999999999999999999
Q ss_pred cEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----------ccCCcEEeCCccCcCcccc
Q 023109 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----------YTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 167 ~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----------~~~a~~v~~~l~el~~~~~ 219 (287)
+|++|||+. +|+.+|+++|+.++++.++...... ...++++++++.++...+.
T Consensus 234 e~l~vGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~pd~vi~~l~el~~~l~ 297 (306)
T 2oyc_A 234 RTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLE 297 (306)
T ss_dssp GEEEEESCTTTHHHHHHHHTCEEEEESSSSCCHHHHHHHHHTTCGGGSCSEEESSGGGGGGGC-
T ss_pred HEEEECCCchHHHHHHHHCCCeEEEECCCCCCHHHHHhhhcccccCCCCCEEECCHHHHHHHHH
Confidence 999999997 9999999999999999987543221 2468999999999876553
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.1e-20 Score=144.77 Aligned_cols=107 Identities=16% Similarity=0.114 Sum_probs=90.3
Q ss_pred cHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCC
Q 023109 95 GANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS 174 (287)
Q Consensus 95 g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs 174 (287)
...++|+.++++|++++++|+.+...++..+ +.+|+..+|+. .||+++.++++++.++++|+++++|||+
T Consensus 39 ~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~-~~lgl~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~ 108 (180)
T 1k1e_A 39 RDGLGIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKLFFLG---------KLEKETACFDLMKQAGVTAEQTAYIGDD 108 (180)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCEEEES---------CSCHHHHHHHHHHHHTCCGGGEEEEECS
T ss_pred chHHHHHHHHHCCCeEEEEeCCCcHHHHHHH-HHcCCceeecC---------CCCcHHHHHHHHHHcCCCHHHEEEECCC
Confidence 3447999999999999999999999999888 88888765532 5899999999999999999999999999
Q ss_pred HhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCc
Q 023109 175 VIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (287)
Q Consensus 175 ~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el 214 (287)
.+|+++++.+|+.+++.+. .+..+..+++++.+..+.
T Consensus 109 ~~Di~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~~~~ 145 (180)
T 1k1e_A 109 SVDLPAFAACGTSFAVADA---PIYVKNAVDHVLSTHGGK 145 (180)
T ss_dssp GGGHHHHHHSSEEEECTTS---CHHHHTTSSEECSSCTTT
T ss_pred HHHHHHHHHcCCeEEeCCc---cHHHHhhCCEEecCCCCC
Confidence 9999999999998876533 344567789998876543
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.5e-20 Score=156.77 Aligned_cols=124 Identities=13% Similarity=0.130 Sum_probs=101.0
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHH--HHHHHhh-cCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATI--ESKISYQ-HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~--~~~l~~~-~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
..++|++.++++.++ +|+++ ++||.+.... ...+ .. .++..+|+.+++++....+||+|..|+.+++. ++|+
T Consensus 129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~KP~~~~~~~~~~~--~~~~ 203 (263)
T 1zjj_A 129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIY-PGAGSIIAALKVATNVEPIIIGKPNEPMYEVVREM--FPGE 203 (263)
T ss_dssp TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEE-ECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHH--STTC
T ss_pred CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCc-CCcHHHHHHHHHHhCCCccEecCCCHHHHHHHHHh--CCcc
Confidence 456789999999999 88888 9999877544 2233 22 45666789998888888999999999999999 8999
Q ss_pred cEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc-c---cCCcEEeCCccCcCccc
Q 023109 167 SSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR-Y---TAADEVINSLLDLRPEK 218 (287)
Q Consensus 167 ~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~-~---~~a~~v~~~l~el~~~~ 218 (287)
+++||||++ +|+.+|+++|+.++++.++...... . ..++++++++.++...+
T Consensus 204 ~~~~VGD~~~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~p~~~~~~l~el~~~l 260 (263)
T 1zjj_A 204 ELWMVGDRLDTDIAFAKKFGMKAIMVLTGVSSLEDIKKSEYKPDLVLPSVYELIDYL 260 (263)
T ss_dssp EEEEEESCTTTHHHHHHHTTCEEEEESSSSCCHHHHTTCSSCCSEEESSGGGGGGGG
T ss_pred cEEEECCChHHHHHHHHHcCCeEEEECCCCCChHHHHhcCCCCCEEECCHHHHHHHH
Confidence 999999996 9999999999999999886543322 2 26899999999986543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=2.3e-18 Score=143.71 Aligned_cols=75 Identities=35% Similarity=0.412 Sum_probs=65.4
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccccc--------CCcEEeCCccCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYT--------AADEVINSLLDL 214 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~--------~a~~v~~~l~el 214 (287)
...+||+|..+..+++.+|++++++++|||++ +|+.+++++|+.++++.++....+... .|+++++++.++
T Consensus 183 ~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g~~~~~~~~~~~~~~~~~~d~v~~~~~el 262 (268)
T 3qgm_A 183 VVVGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTGVTTRENLDQMIERHGLKPDYVFNSLKDM 262 (268)
T ss_dssp EECSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSSSCCTTTHHHHHHHHTCCCSEEESSHHHH
T ss_pred eecCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCCCCCHHHHHhhccccCCCCCEEECCHHHH
Confidence 56789999999999999999999999999995 999999999999999998765554433 789999999988
Q ss_pred Cccc
Q 023109 215 RPEK 218 (287)
Q Consensus 215 ~~~~ 218 (287)
.+.+
T Consensus 263 ~~~l 266 (268)
T 3qgm_A 263 VEAL 266 (268)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 6543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=99.77 E-value=5.4e-20 Score=146.16 Aligned_cols=101 Identities=14% Similarity=0.186 Sum_probs=87.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
.++.|+++|++++++||.+...++..+ +.+|+..+|+. .||++..+.++++.++++|++|++|||+.||+
T Consensus 60 ~l~~L~~~G~~~~ivT~~~~~~~~~~l-~~lgi~~~~~~---------~k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi 129 (195)
T 3n07_A 60 GVKALMNAGIEIAIITGRRSQIVENRM-KALGISLIYQG---------QDDKVQAYYDICQKLAIAPEQTGYIGDDLIDW 129 (195)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCCEEECS---------CSSHHHHHHHHHHHHCCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCEEEEEECcCHHHHHHHH-HHcCCcEEeeC---------CCCcHHHHHHHHHHhCCCHHHEEEEcCCHHHH
Confidence 488899999999999999999999999 88898766543 38999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
++++++|+.+++.+. .+..+..+++++.+..
T Consensus 130 ~~~~~ag~~va~~na---~~~~~~~ad~v~~~~~ 160 (195)
T 3n07_A 130 PVMEKVALRVCVADG---HPLLAQRANYVTHIKG 160 (195)
T ss_dssp HHHTTSSEEEECTTS---CHHHHHHCSEECSSCT
T ss_pred HHHHHCCCEEEECCh---HHHHHHhCCEEEcCCC
Confidence 999999988765443 4555677888887754
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.5e-18 Score=144.69 Aligned_cols=85 Identities=26% Similarity=0.373 Sum_probs=69.9
Q ss_pred cccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCeEEEECCCCCcccc-cc---CCcEE
Q 023109 133 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-YT---AADEV 207 (287)
Q Consensus 133 ~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs-~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~---~a~~v 207 (287)
..|+.+++.+.....||++..++.+++.+|++++++++|||+ .||+.+++.+|+.+++++++....+. +. .|+++
T Consensus 168 ~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~d~v 247 (266)
T 3pdw_A 168 SVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLVHTGVTKREHMTDDMEKPTHA 247 (266)
T ss_dssp HHHHHHHCCCCEECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEECCC------CCTTSCCCSEE
T ss_pred HHHHHHhCCCccccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence 446666677778889999999999999999999999999999 69999999999999999987654433 33 59999
Q ss_pred eCCccCcCcc
Q 023109 208 INSLLDLRPE 217 (287)
Q Consensus 208 ~~~l~el~~~ 217 (287)
++++.++...
T Consensus 248 ~~~~~el~~~ 257 (266)
T 3pdw_A 248 IDSLTEWIPY 257 (266)
T ss_dssp ESSGGGGHHH
T ss_pred eCCHHHHHHH
Confidence 9999998654
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.76 E-value=1.6e-19 Score=143.15 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=86.9
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
.++.|+++|++++++||.+...++..+ +.+|+..+|+.+ ||+++.+.++++.++++|+++++|||+.+|+
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l-~~lgl~~~~~~~---------kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di 123 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRM-EQLGITHYYKGQ---------VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDL 123 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHH-HHHTCCEEECSC---------SSCHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHH-HHcCCccceeCC---------CChHHHHHHHHHHhCCCHHHEEEECCCHHHH
Confidence 488899999999999999999999999 888987766643 8999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
++++.+|+.+++.+. .+.....+++++.+..
T Consensus 124 ~~~~~ag~~~~~~~~---~~~~~~~ad~v~~~~~ 154 (191)
T 3n1u_A 124 PLIQQVGLGVAVSNA---VPQVLEFADWRTERTG 154 (191)
T ss_dssp HHHHHSSEEEECTTC---CHHHHHHSSEECSSCT
T ss_pred HHHHHCCCEEEeCCc---cHHHHHhCCEEecCCC
Confidence 999999998754332 3455677888888754
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=99.76 E-value=4.3e-19 Score=147.94 Aligned_cols=84 Identities=18% Similarity=0.216 Sum_probs=72.0
Q ss_pred cccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCC-HhhHHHHHHcCCeEEEECCCCCcccc-cc---CCcEE
Q 023109 133 ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDS-VIGVVAGKAAGMEVVAVPSLPKQTHR-YT---AADEV 207 (287)
Q Consensus 133 ~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs-~~Dv~~a~~aG~~~i~v~~~~~~~~~-~~---~a~~v 207 (287)
..|+.+++.+....+||+|..+..+++.+|++|+++++|||+ .+|+.+|+++|+.++++.++....+. .. .|+++
T Consensus 167 ~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~g~~~~~~~~~~~~~pd~~ 246 (264)
T 3epr_A 167 ALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVTTGFTTVEEVPDLPIQPSYV 246 (264)
T ss_dssp HHHHHHHSCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCGGGGGGCSSCCSEE
T ss_pred HHHHHHhCCCcccCCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEECCCCCChHHHHhcCCCCCEE
Confidence 346666677788899999999999999999999999999999 59999999999999999987655443 22 68999
Q ss_pred eCCccCcCc
Q 023109 208 INSLLDLRP 216 (287)
Q Consensus 208 ~~~l~el~~ 216 (287)
++++.++..
T Consensus 247 ~~~l~~l~~ 255 (264)
T 3epr_A 247 LASLDEWTF 255 (264)
T ss_dssp ESCGGGCCS
T ss_pred ECCHHHHhc
Confidence 999998854
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.1e-20 Score=153.43 Aligned_cols=115 Identities=17% Similarity=0.169 Sum_probs=96.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
..+++||+.++|+.|+++|++++++||.+...++..+ +++|+..+|+.++ |+.+..+++.++..|++|
T Consensus 134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~-~~~gl~~~f~~~~-----------p~~k~~~~~~l~~~~~~~ 201 (263)
T 2yj3_A 134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS-KELNIQEYYSNLS-----------PEDKVRIIEKLKQNGNKV 201 (263)
Confidence 4578999999999999999999999999999999899 8889988888765 344577889999999999
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCccc
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRPEK 218 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~~~ 218 (287)
+||||+.+|+++++++|+.+.+.+. .......+++++ +++.++...+
T Consensus 202 ~~VGD~~~D~~aa~~Agv~va~g~~---~~~~~~~ad~v~~~~~l~~l~~~l 250 (263)
T 2yj3_A 202 LMIGDGVNDAAALALADVSVAMGNG---VDISKNVADIILVSNDIGTLLGLI 250 (263)
Confidence 9999999999999999977665432 333456788888 8888876543
|
| >3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis} | Back alignment and structure |
|---|
Probab=99.75 E-value=9.2e-18 Score=131.73 Aligned_cols=165 Identities=11% Similarity=0.100 Sum_probs=109.3
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh-hh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD-HL 87 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 87 (287)
+++|+||+||||+|+...+..++++ .+|...+.+.. .+.+....+ +. ..+.+...+ +.. ..
T Consensus 4 ~~~viFD~DGtL~Ds~~~~~~~~~~---~~g~~~~~~~~---~g~~~~~~~-------~~--~~~~~~~~~---~~~~~~ 65 (180)
T 3bwv_A 4 RQRIAIDMDEVLADTLGAVVKAVNE---RADLNIKMESL---NGKKLKHMI-------PE--HEGLVMDIL---KEPGFF 65 (180)
T ss_dssp CCEEEEETBTTTBCHHHHHHHHHHH---HSCCCCCGGGC---TTCCC-----------------CHHHHHH---HSTTGG
T ss_pred ccEEEEeCCCcccccHHHHHHHHHH---HhCCCCCHHHH---cCccHHHHC-------Cc--hHHHHHHHH---hCcchh
Confidence 5899999999999999888777765 56776554432 233322211 11 111221111 111 23
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCC---ChH--HHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNS---HRA--TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~---~~~--~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
...+++||+.++|+.|++. ++++++||+ +.. .....+..+++...+|+.++++++. .+
T Consensus 66 ~~~~~~pg~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~~~---------------~l- 128 (180)
T 3bwv_A 66 RNLDVMPHAQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGRKN---------------II- 128 (180)
T ss_dssp GSCCBCTTHHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSCGG---------------GB-
T ss_pred ccCCCCcCHHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCCcC---------------ee-
Confidence 4678999999999999985 999999998 322 2244453556776778888877652 11
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCcc
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~ 217 (287)
++|++||||++|+. +++| .+++++.++... ..++++++++.|+...
T Consensus 129 ---~~~l~ieDs~~~i~--~aaG-~~i~~~~~~~~~---~~~~~~i~~~~el~~~ 174 (180)
T 3bwv_A 129 ---LADYLIDDNPKQLE--IFEG-KSIMFTASHNVY---EHRFERVSGWRDVKNY 174 (180)
T ss_dssp ---CCSEEEESCHHHHH--HCSS-EEEEECCGGGTT---CCSSEEECSHHHHHHH
T ss_pred ---cccEEecCCcchHH--HhCC-CeEEeCCCcccC---CCCceecCCHHHHHHH
Confidence 67999999999985 5689 999998754322 4578889998887543
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=1.3e-17 Score=131.80 Aligned_cols=101 Identities=14% Similarity=0.149 Sum_probs=86.1
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
+++.|+++|++++++||.+...++..+ +.+|+..+|+. .||+++.++++++.+|++|++++||||+.+|+
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l-~~lgl~~~~~~---------~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di 130 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRC-ATLGITHLYQG---------QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDW 130 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHH-HHHTCCEEECS---------CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGH
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHH-HHcCCceeecC---------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
Confidence 889999999999999999999999888 88888655532 59999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
.+++++|+.+++.+. .+.....+++++.+..
T Consensus 131 ~~a~~ag~~~~~~~~---~~~~~~~ad~v~~~~~ 161 (188)
T 2r8e_A 131 PVMEKVGLSVAVADA---HPLLIPRADYVTRIAG 161 (188)
T ss_dssp HHHTTSSEEEECTTS---CTTTGGGSSEECSSCT
T ss_pred HHHHHCCCEEEecCc---CHHHHhcCCEEEeCCC
Confidence 999999998876443 3344556888888874
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-18 Score=147.44 Aligned_cols=119 Identities=13% Similarity=0.104 Sum_probs=94.2
Q ss_pred CCCCcHHHHHHHHHHC-CCCEEEEeCC---------------------ChHHHHHHHHhhcCCcccccee----------
Q 023109 91 KALPGANRLIKHLSCH-GVPMALASNS---------------------HRATIESKISYQHGWNESFSVI---------- 138 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~-g~~v~l~T~~---------------------~~~~~~~~l~~~~gl~~~fd~i---------- 138 (287)
...+++.++++.+++. |+++.+.|+. ....+...+ +..|+..+|...
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~ 200 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKIC-EEYGVSVNINRCNPLAGDPEDS 200 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHH-HHHTEEEEEEECCGGGTCCTTE
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHH-HHcCCCEEEEEccccccCCCCc
Confidence 5668999999999887 9999999876 445566666 677877666554
Q ss_pred eccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 139 VGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 139 ~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
++.+.....++++..+.++++.+|+++++|++|||+.||+.+++.+|+.+++.+. .+..+..+++++.+..+
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~~~---~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLKNA---TQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECTTC---CHHHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEECCc---cHHHHHhCCEEcCCCCc
Confidence 4556667889999999999999999999999999999999999999976655443 44455667777776554
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.2e-17 Score=147.80 Aligned_cols=97 Identities=15% Similarity=0.299 Sum_probs=86.9
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCC------------hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSH------------RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~------------~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
++||+.++|+.|+++|++++|+||.+ ...+...+ +.+|+. |+.+++++++...||+|++|..+++
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l-~~lgl~--fd~i~~~~~~~~~KP~p~~~~~a~~ 164 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE 164 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSTTSTTSSHHHHHHHH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHH-HHcCCC--EEEEEECCCCCCCCCCHHHHHHHHH
Confidence 78999999999999999999999966 22266677 778884 9999999999999999999999999
Q ss_pred HcC----CCCCcEEEEeCCH-----------------hhHHHHHHcCCeEEEE
Q 023109 160 RLN----MEPSSSLVIEDSV-----------------IGVVAGKAAGMEVVAV 191 (287)
Q Consensus 160 ~l~----~~~~~~l~iGDs~-----------------~Dv~~a~~aG~~~i~v 191 (287)
.+| ++|++|+||||+. .|+.+|+++|+.++..
T Consensus 165 ~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~f~~p 217 (416)
T 3zvl_A 165 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFATP 217 (416)
T ss_dssp HSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCCEECH
T ss_pred HhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCcccCc
Confidence 997 9999999999997 8999999999997753
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.69 E-value=6.4e-18 Score=141.78 Aligned_cols=69 Identities=20% Similarity=0.096 Sum_probs=58.2
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
+....+.+|+..++++++.+|++++++++|||+.||++|++.+|+.+++.+ ..+..+..|++++++..+
T Consensus 190 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~n---a~~~~k~~A~~v~~~~~e 258 (279)
T 4dw8_A 190 ELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAMGN---AQEPVKKAADYITLTNDE 258 (279)
T ss_dssp EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHHHCSEECCCGGG
T ss_pred EEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEcCC---CcHHHHHhCCEEcCCCCC
Confidence 345667888999999999999999999999999999999999996666544 366677889999988664
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.68 E-value=1.7e-17 Score=135.58 Aligned_cols=192 Identities=14% Similarity=0.060 Sum_probs=115.8
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHc---CCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
++|+|+||+||||++++..+.....++++++ |..+. -..|++.... ..+...++.+...-.........-.
T Consensus 2 m~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~v~-----i~TGR~~~~~-~~~~~~l~~~~~~i~~nGa~i~~~~ 75 (231)
T 1wr8_A 2 KIKAISIDIDGTITYPNRMIHEKALEAIRRAESLGIPIM-----LVTGNTVQFA-EAASILIGTSGPVVAEDGGAISYKK 75 (231)
T ss_dssp CCCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHTTCCEE-----EECSSCHHHH-HHHHHHHTCCSCEEEGGGTEEEETT
T ss_pred ceeEEEEECCCCCCCCCCcCCHHHHHHHHHHHHCCCEEE-----EEcCCChhHH-HHHHHHcCCCCeEEEeCCcEEEeCC
Confidence 3799999999999998654444444444433 44321 1234444332 2334444433100000000000000
Q ss_pred hhhccCCCCCcHHHHHHHHH-HC-CCCE-----------EEEe-CCChHHHHHHHHhhcCCccccceeecc----CCcCC
Q 023109 85 DHLCKVKALPGANRLIKHLS-CH-GVPM-----------ALAS-NSHRATIESKISYQHGWNESFSVIVGS----DEVRT 146 (287)
Q Consensus 85 ~~~~~~~~~~g~~~~l~~l~-~~-g~~v-----------~l~T-~~~~~~~~~~l~~~~gl~~~fd~i~~~----~~~~~ 146 (287)
+.....++ +.+.++++.++ +. |+.+ .+++ +.+...++..+ +.++ ..|+.+ ++ +....
T Consensus 76 ~~~~~~~l-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~-~~~~~~ei~~~ 150 (231)
T 1wr8_A 76 KRIFLASM-DEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREII-NELN--LNLVAV-DSGFAIHVKKP 150 (231)
T ss_dssp EEEESCCC-SHHHHHHHHHHHHCTTCCBCTTGGGCSSCEEECTTTSCHHHHHHHH-HHTT--CSCEEE-ECSSCEEEECT
T ss_pred EEEEeccH-HHHHHHHHHHHHhCCCceEEecCCCceeeEEEECCCCCHHHHHHHH-HhcC--CcEEEE-ecCcEEEEecC
Confidence 00112223 77777777777 54 5543 5555 44666677666 5544 456655 33 33467
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 147 GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
++|++..++.+++.+|++++++++|||+.||+++++.+|+.+++ .. ..+..+..+++++++..+
T Consensus 151 ~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~~--~~~~~~~~a~~v~~~~~e 214 (231)
T 1wr8_A 151 WINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAV-AQ--APKILKENADYVTKKEYG 214 (231)
T ss_dssp TCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEEC-TT--SCHHHHTTCSEECSSCHH
T ss_pred CCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-cC--CCHHHHhhCCEEecCCCc
Confidence 89999999999999999999999999999999999999988543 22 234445678888877654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.68 E-value=5.2e-17 Score=136.97 Aligned_cols=68 Identities=18% Similarity=0.052 Sum_probs=59.0
Q ss_pred CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
....+.+++.+++.+++.+|++++++++|||+.||++|++.||+.+++.+. .+..+..|++++++..+
T Consensus 196 i~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na---~~~~k~~Ad~v~~s~~e 263 (290)
T 3dnp_A 196 IVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAMGNA---VPEIKRKADWVTRSNDE 263 (290)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHSSEECCCTTT
T ss_pred EEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEecCC---cHHHHHhcCEECCCCCc
Confidence 345678889999999999999999999999999999999999987776554 56678889999988776
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.67 E-value=4.3e-17 Score=126.06 Aligned_cols=99 Identities=14% Similarity=0.028 Sum_probs=80.2
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHh--hcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHh
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISY--QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~--~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~ 176 (287)
.|+.|+++|++++++|+. ..++..+ + .+++. ++.+ .+++++.+.++++.++++|++++||||+.|
T Consensus 44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l-~~l~lgi~-----~~~g-----~~~K~~~l~~~~~~~gi~~~~~~~vGD~~n 110 (168)
T 3ewi_A 44 GISLLKKSGIEVRLISER--ACSKQTL-SALKLDCK-----TEVS-----VSDKLATVDEWRKEMGLCWKEVAYLGNEVS 110 (168)
T ss_dssp HHHHHHHTTCEEEEECSS--CCCHHHH-HTTCCCCC-----EECS-----CSCHHHHHHHHHHHTTCCGGGEEEECCSGG
T ss_pred HHHHHHHCCCEEEEEeCc--HHHHHHH-HHhCCCcE-----EEEC-----CCChHHHHHHHHHHcCcChHHEEEEeCCHh
Confidence 689999999999999999 5677777 6 45553 2221 367889999999999999999999999999
Q ss_pred hHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 177 GVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 177 Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
|+++++.+|+.+++.+. .+..+..+++++++..+
T Consensus 111 Di~~~~~ag~~~a~~na---~~~~k~~Ad~v~~~~~~ 144 (168)
T 3ewi_A 111 DEECLKRVGLSAVPADA---CSGAQKAVGYICKCSGG 144 (168)
T ss_dssp GHHHHHHSSEEEECTTC---CHHHHTTCSEECSSCTT
T ss_pred HHHHHHHCCCEEEeCCh---hHHHHHhCCEEeCCCCC
Confidence 99999999988765433 45667888998877543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.65 E-value=5.3e-17 Score=136.14 Aligned_cols=66 Identities=15% Similarity=0.107 Sum_probs=48.8
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
..+.+|+..++.+++.+|++++++++|||+.||++|++.||+.+++.+. .++.+..|++++++..+
T Consensus 193 ~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam~na---~~~~k~~A~~v~~~~~e 258 (279)
T 3mpo_A 193 NRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAMGNA---IDEVKEAAQAVTLTNAE 258 (279)
T ss_dssp ESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC------CCHHHHHCSCBC-----
T ss_pred cCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeeccCC---CHHHHHhcceeccCCCc
Confidence 3455688999999999999999999999999999999999976665554 66677888988887654
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.63 E-value=1.3e-15 Score=127.26 Aligned_cols=100 Identities=9% Similarity=0.052 Sum_probs=72.6
Q ss_pred CCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC------CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHH
Q 023109 107 GVPMALASNSHRATIESKISYQHGWNESFSVIVGSD------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVA 180 (287)
Q Consensus 107 g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~------~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~ 180 (287)
++...+++ .+....+... +.++. .|+.+.+.. ....+++++..++++++.+|++++++++|||+.||++|
T Consensus 156 ~~~ki~~~-~~~~~~~~~~-~~l~~--~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m 231 (274)
T 3fzq_A 156 DIHKICLW-SNEKVFDEVK-DILQD--KMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVM 231 (274)
T ss_dssp CCCEEEEE-CCHHHHHHHH-HHHGG--GEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHH
T ss_pred CeEEEEEE-cCHHHHHHHH-HHhhc--ceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHH
Confidence 34344444 4444444444 44332 244444443 35678889999999999999999999999999999999
Q ss_pred HHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 181 GKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 181 a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
++.||+.+++.+. .++.+..|++++++..+
T Consensus 232 ~~~ag~~vam~na---~~~~k~~A~~v~~~~~e 261 (274)
T 3fzq_A 232 FQASDVTIAMKNS---HQQLKDIATSICEDIFD 261 (274)
T ss_dssp HHTCSEEEEETTS---CHHHHHHCSEEECCGGG
T ss_pred HHhcCceEEecCc---cHHHHHhhhheeCCCch
Confidence 9999977776554 56667888999988765
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.60 E-value=7.4e-16 Score=129.61 Aligned_cols=104 Identities=8% Similarity=0.052 Sum_probs=72.6
Q ss_pred HCCCCEEEEe-CCChHHHHHHHHhhcCCccccceeeccC----CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHH
Q 023109 105 CHGVPMALAS-NSHRATIESKISYQHGWNESFSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVV 179 (287)
Q Consensus 105 ~~g~~v~l~T-~~~~~~~~~~l~~~~gl~~~fd~i~~~~----~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~ 179 (287)
....++.++. ..........+.+.++ ..+..+.+.. ....+.+|+.+++.+++.+|++++++++|||+.||++
T Consensus 164 ~~~~ki~i~~~~~~~~~~~~~l~~~~~--~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ 241 (283)
T 3dao_A 164 NDIIKFTVFHPDKCEELCTPVFIPAWN--KKAHLAAAGKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIE 241 (283)
T ss_dssp SCCCEEEEECSSCHHHHHTTTHHHHHT--TTEEEEEETTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHH
T ss_pred cCceEEEEEcChHHHHHHHHHHHHHhc--CCEEEEEecCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 4456777773 2222211112213332 2244444433 2456777899999999999999999999999999999
Q ss_pred HHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 180 AGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 180 ~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
|++.+|+.+++.+. .++.+..|++++++..+
T Consensus 242 ml~~ag~~vam~na---~~~~k~~A~~v~~s~~e 272 (283)
T 3dao_A 242 MLQNAGISYAVSNA---RQEVIAAAKHTCAPYWE 272 (283)
T ss_dssp HHHHSSEEEEETTS---CHHHHHHSSEEECCGGG
T ss_pred HHHhCCCEEEcCCC---CHHHHHhcCeECCCCCC
Confidence 99999987777655 56678889999988765
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.3e-17 Score=136.22 Aligned_cols=67 Identities=13% Similarity=0.120 Sum_probs=57.2
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
...++|++..+..+++.+|++++++++|||+.||++|++.+|+.+++.+ ..+..+..+++++++..+
T Consensus 182 ~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~~n---~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 182 TAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQ---AKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp ESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHHHSSEECCCGGG
T ss_pred cCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEecC---ccHHHHhhCCEEeccCch
Confidence 4678899999999999999999999999999999999999998766532 244556778999988877
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=99.58 E-value=5.5e-15 Score=122.16 Aligned_cols=99 Identities=15% Similarity=0.162 Sum_probs=75.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCc--cccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~---~~~~~~~l~~~~gl~--~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
..++.||+.++|+.|+++|++++++||++ ...+...+ +.+|+. .+|+.+++.++. .||.+ ...+. ..+
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L-~~~Gl~~v~~~~vi~~~~~~--~K~~~--~~~~~-~~~- 171 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNL-ERVGAPQATKEHILLQDPKE--KGKEK--RRELV-SQT- 171 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHH-HHHTCSSCSTTTEEEECTTC--CSSHH--HHHHH-HHH-
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHH-HHcCCCcCCCceEEECCCCC--CCcHH--HHHHH-HhC-
Confidence 56788999999999999999999999998 45566677 777887 677877776543 34433 33332 233
Q ss_pred CCCcEEEEeCCHhhHHHH-------HH---------cCCeEEEECCCC
Q 023109 164 EPSSSLVIEDSVIGVVAG-------KA---------AGMEVVAVPSLP 195 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a-------~~---------aG~~~i~v~~~~ 195 (287)
.+.|+||||+.+|+.+| ++ +|+.++.++.+.
T Consensus 172 -~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~ 218 (258)
T 2i33_A 172 -HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPM 218 (258)
T ss_dssp -EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCS
T ss_pred -CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCC
Confidence 23499999999999998 24 899999998853
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=99.58 E-value=3.7e-16 Score=129.60 Aligned_cols=195 Identities=12% Similarity=0.120 Sum_probs=110.6
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHH---cCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVK---YGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
++|+|+||+||||++++..+.....+++++ .|..+. -..|++.... ..+...++.+. .-...........
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~-----~aTGR~~~~~-~~~~~~l~~~~-~i~~nGa~i~~~~ 74 (258)
T 2pq0_A 2 GRKIVFFDIDGTLLDEQKQLPLSTIEAVRRLKQSGVYVA-----IATGRAPFMF-EHVRKQLGIDS-FVSFNGQYVVFEG 74 (258)
T ss_dssp CCCEEEECTBTTTBCTTSCCCHHHHHHHHHHHHTTCEEE-----EECSSCGGGS-HHHHHHHTCCC-EEEGGGTEEEETT
T ss_pred CceEEEEeCCCCCcCCCCccCHHHHHHHHHHHHCCCEEE-----EECCCChHHH-HHHHHhcCCCE-EEECCCCEEEECC
Confidence 478999999999999865554444444443 354321 1234433222 12223333221 0000000000000
Q ss_pred hh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCCh-------HHHHHHHHhhcC-----C-------ccccceeeccC--
Q 023109 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHR-------ATIESKISYQHG-----W-------NESFSVIVGSD-- 142 (287)
Q Consensus 85 ~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~-------~~~~~~l~~~~g-----l-------~~~fd~i~~~~-- 142 (287)
+. ....-..+.+.++++.+++.|+.+.+.|+... ......+ ...+ + ...++.++.++
T Consensus 75 ~~i~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 153 (258)
T 2pq0_A 75 NVLYKQPLRREKVRALTEEAHKNGHPLVFMDAEKMRASIGDHPHIHVSM-ASLKFAHPPVDPLYYENKDIYQALLFCRAE 153 (258)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCCEEEECSSCEEESSSSCHHHHHHH-HHTTCCCCCBCTTGGGGSCCCEEEECSCHH
T ss_pred EEEEEecCCHHHHHHHHHHHHhCCCeEEEEeCCcEEEecCCcHHHHHHH-HhhcCCccccccchhhccCceEEEEECCHH
Confidence 00 11222346777888888888888777765430 1111122 1111 1 11122222111
Q ss_pred -----------------------CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc
Q 023109 143 -----------------------EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH 199 (287)
Q Consensus 143 -----------------------~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~ 199 (287)
-...+..|+..++.+++.+|++++++++|||+.||++|++.+|+.+++.+ ..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam~n---a~~~ 230 (258)
T 2pq0_A 154 EEEPYVRNYPEFRFVRWHDVSTDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAMGN---AHEE 230 (258)
T ss_dssp HHHHHHHHCTTEEEEEEETTEEEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEETT---CCHH
T ss_pred HHHHHHHhCCCeEEEEeCCceEEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEeCC---CcHH
Confidence 12345567788999999999999999999999999999999999888643 3556
Q ss_pred cccCCcEEeCCccC
Q 023109 200 RYTAADEVINSLLD 213 (287)
Q Consensus 200 ~~~~a~~v~~~l~e 213 (287)
.+..|++++++..+
T Consensus 231 ~k~~A~~v~~~~~~ 244 (258)
T 2pq0_A 231 VKRVADFVTKPVDK 244 (258)
T ss_dssp HHHTCSEEECCGGG
T ss_pred HHHhCCEEeCCCCc
Confidence 67789999987764
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.53 E-value=3e-15 Score=124.67 Aligned_cols=68 Identities=18% Similarity=0.080 Sum_probs=58.3
Q ss_pred CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
....+.+|+..++++++.+|++++++++|||+.||++|++.+|+.+++.+. .++.+..|++++++..+
T Consensus 188 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~na---~~~~k~~Ad~v~~~~~e 255 (268)
T 3r4c_A 188 VNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNA---SEKVQSVADFVTDTVDN 255 (268)
T ss_dssp EEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHTCSEECCCTTT
T ss_pred EeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeCCC---cHHHHHhcCEeeCCCCc
Confidence 345677888999999999999999999999999999999999977666554 66677889999988765
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=99.53 E-value=2.2e-15 Score=127.97 Aligned_cols=76 Identities=13% Similarity=-0.002 Sum_probs=61.3
Q ss_pred cceeeccC----CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 135 FSVIVGSD----EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 135 fd~i~~~~----~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
++.+.+.. ....+.+|+..++++++.+|++++++++|||+.||++|++.||+.+++.+. .++.+..|++++++
T Consensus 210 ~~~~~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~na---~~~~k~~Ad~v~~~ 286 (304)
T 3l7y_A 210 LVGTASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMANA---PKNVKAAANYQAKS 286 (304)
T ss_dssp EEEEECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECTTS---CHHHHHHCSEECCC
T ss_pred EEEEEcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcCCc---CHHHHHhccEEcCC
Confidence 55554433 235677788999999999999999999999999999999999976665444 66678889999988
Q ss_pred ccC
Q 023109 211 LLD 213 (287)
Q Consensus 211 l~e 213 (287)
..+
T Consensus 287 ~~e 289 (304)
T 3l7y_A 287 NDE 289 (304)
T ss_dssp GGG
T ss_pred CCc
Confidence 765
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.53 E-value=8.8e-15 Score=118.99 Aligned_cols=65 Identities=14% Similarity=0.018 Sum_probs=52.4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.+.+|+..++.+++.++++++++++|||+.||++|++.+|+.+++.+ ..+..+..+++++.+..+
T Consensus 150 ~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~ag~~va~~n---~~~~~k~~a~~v~~~~~~ 214 (227)
T 1l6r_A 150 RGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPAN---ATDNIKAVSDFVSDYSYG 214 (227)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTT---SCHHHHHHCSEECSCCTT
T ss_pred CCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHHcCceEEecC---chHHHHHhCCEEecCCCC
Confidence 45678889999999999999999999999999999999998755432 234456678888877654
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=99.50 E-value=2.4e-15 Score=125.66 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=73.8
Q ss_pred HCCCCEEEEeCCChHHHHHHHHhhcC--Cccccceeecc----CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 105 CHGVPMALASNSHRATIESKISYQHG--WNESFSVIVGS----DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 105 ~~g~~v~l~T~~~~~~~~~~l~~~~g--l~~~fd~i~~~----~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
..++++.++++... .+..+ +.++ +...|+.+.++ +....+++++..++.+++.+|++++++++|||+.||+
T Consensus 144 ~~~~ki~i~~~~~~--~~~~~-~~l~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~ 220 (271)
T 1rlm_A 144 DVLFKFSLNLPDEQ--IPLVI-DKLHVALDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDA 220 (271)
T ss_dssp SCEEEEEEECCGGG--HHHHH-HHHHHHTTTSSEEEECSTTEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred CceEEEEEEcCHHH--HHHHH-HHHHHHcCCcEEEEeccCCeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHH
Confidence 34566777765432 33333 3222 33456666555 3356788999999999999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
+|++.+|+.+++.+. .+..+..+++++++..+
T Consensus 221 ~m~~~ag~~va~~na---~~~~k~~a~~v~~~~~~ 252 (271)
T 1rlm_A 221 EMLKMARYSFAMGNA---AENIKQIARYATDDNNH 252 (271)
T ss_dssp HHHHHCSEEEECTTC---CHHHHHHCSEECCCGGG
T ss_pred HHHHHcCCeEEeCCc---cHHHHHhCCeeCcCCCC
Confidence 999999987654332 44556678888887764
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=99.47 E-value=1.5e-13 Score=116.51 Aligned_cols=100 Identities=16% Similarity=0.052 Sum_probs=85.2
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhh--------cCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQ--------HGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~--------~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
+++||+.++|+.|+++|++++++||.+... +...+ ++ +|+ .|+.++++++. ..||+|+.+..+++
T Consensus 188 ~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l-~~~~~~~~~~~~~--~~~~~~~~~~~-~~kp~p~~~~~~~~ 263 (301)
T 1ltq_A 188 VINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYY-RMTRKWVEDIAGV--PLVMQCQREQG-DTRKDDVVKEEIFW 263 (301)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHH-HHHHHHHHHTTCC--CCSEEEECCTT-CCSCHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHH-HhcccccccccCC--CchheeeccCC-CCcHHHHHHHHHHH
Confidence 458999999999999999999999997543 34455 55 788 58998887765 46899999999999
Q ss_pred HcCCCCCc-EEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 160 RLNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 160 ~l~~~~~~-~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
.++.++.+ |+||||+..|+.+|+++|+.++.+..|
T Consensus 264 ~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v~~G 299 (301)
T 1ltq_A 264 KHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 299 (301)
T ss_dssp HHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred HHhccccceEEEeCCcHHHHHHHHHcCCeEEEecCC
Confidence 99887754 799999999999999999999999875
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.46 E-value=1.2e-14 Score=122.23 Aligned_cols=67 Identities=19% Similarity=0.147 Sum_probs=54.6
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCc--EEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAAD--EVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~--~v~~~l~e 213 (287)
...+.+|+.+++++++.+|++++++++|||+.||++|++.+|+.+++.+. .++.+..|+ .++++..+
T Consensus 204 ~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm~Na---~~~vk~~A~~~~v~~sn~e 272 (285)
T 3pgv_A 204 MAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANA---HQRLKDLHPELEVIGSNAD 272 (285)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHCTTSEECCCGGG
T ss_pred ecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEccCC---CHHHHHhCCCCEecccCCc
Confidence 45677789999999999999999999999999999999999976666555 566667675 46666543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=99.44 E-value=5.6e-15 Score=127.05 Aligned_cols=115 Identities=20% Similarity=0.148 Sum_probs=77.2
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc----CC----------------cCCCCC
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----DE----------------VRTGKP 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~----~~----------------~~~~kp 149 (287)
..+.+++.++++.+++ |+++.++|+.....+.... ...++. +.+.+. +. ....++
T Consensus 102 ~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 176 (332)
T 1y8a_A 102 AKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTA-SMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIASLS 176 (332)
T ss_dssp CCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHH-HHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccc-hhhhhh---hhhcccccchhhhccccccceeEEecCHHHHhhh
Confidence 4678999999999999 9999999988877766655 555552 222211 00 000011
Q ss_pred C---------------HHHHH----------HHHHHcCCCCCc----EEEEeCCHhhHHHHHHc----CCeEEEECCCCC
Q 023109 150 S---------------PDIFL----------EAAKRLNMEPSS----SLVIEDSVIGVVAGKAA----GMEVVAVPSLPK 196 (287)
Q Consensus 150 ~---------------~~~~~----------~~~~~l~~~~~~----~l~iGDs~~Dv~~a~~a----G~~~i~v~~~~~ 196 (287)
. |..+. +.....++++++ |++|||+.||++|++.| |+.+++ +.
T Consensus 177 ~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam-na--- 252 (332)
T 1y8a_A 177 GEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF-NG--- 252 (332)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE-SC---
T ss_pred hHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe-cC---
Confidence 0 11122 222222677888 99999999999999999 998877 54
Q ss_pred ccccccCCcEEeCCccC
Q 023109 197 QTHRYTAADEVINSLLD 213 (287)
Q Consensus 197 ~~~~~~~a~~v~~~l~e 213 (287)
.+..+..|++++.+..+
T Consensus 253 ~~~lk~~Ad~v~~~~~~ 269 (332)
T 1y8a_A 253 NEYALKHADVVIISPTA 269 (332)
T ss_dssp CHHHHTTCSEEEECSST
T ss_pred CHHHHhhCcEEecCCCC
Confidence 45566788999987543
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-15 Score=129.85 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=59.7
Q ss_pred cCCCCCCHHHHHHHHHHc----------------------C-----CCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCC
Q 023109 144 VRTGKPSPDIFLEAAKRL----------------------N-----MEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l----------------------~-----~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~ 195 (287)
...+||.+..|+.+.+.+ | .++++++||||++ .|+.+|+++|+.++++.++.
T Consensus 242 ~~~GKP~~~~y~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~G~ 321 (352)
T 3kc2_A 242 YTLGKPTKLTYDFAHHVLIDWEKRLSGKIGQSVKQKLPLLGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGV 321 (352)
T ss_dssp EECSTTCHHHHHHHHHHHHHHHHHHHC--------------CCTTTTTSSEEEEEESCTTTHHHHHHHHTCEEEECSSSS
T ss_pred eEecCCCHHHHHHHHHHHHHHHHhhhcccccccccccccccccccCCCcceEEEEecCcHHHHHHHHHcCCEEEEEccCC
Confidence 357999999999887654 2 2678999999999 59999999999999999865
Q ss_pred Ccccc---ccCCcEEeCCccCcCccc
Q 023109 196 KQTHR---YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 196 ~~~~~---~~~a~~v~~~l~el~~~~ 218 (287)
..... ...++++++++.++...+
T Consensus 322 ~~~~~~~~~~~pd~vi~~l~el~~~i 347 (352)
T 3kc2_A 322 YNEGDDLKECKPTLIVNDVFDAVTKT 347 (352)
T ss_dssp CCTTCCCTTCCCSEECSSHHHHHHHH
T ss_pred CCcccccccCCCCEEECCHHHHHHHH
Confidence 44322 457899999998876543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-13 Score=115.44 Aligned_cols=65 Identities=20% Similarity=0.138 Sum_probs=51.6
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.+.+|+..+..+++.+|++++++++|||+.||++|++.+|+.+++ .. ..+..+..+++++++..+
T Consensus 213 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~--~~~~~~~~a~~v~~~~~~ 277 (288)
T 1nrw_A 213 RKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GN--AREDIKSIADAVTLTNDE 277 (288)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TT--CCHHHHHHCSEECCCGGG
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cC--CCHHHHhhCceeecCCCc
Confidence 345677889999999999999999999999999999999985544 22 234456668888877654
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.26 E-value=8.9e-13 Score=109.82 Aligned_cols=67 Identities=18% Similarity=0.096 Sum_probs=54.6
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
...+.+|+..+..+++.+|++++++++|||+.||++|++.+|+.+++.+ ..+..+..+++++++..+
T Consensus 185 ~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~~n---~~~~~~~~a~~v~~~~~~ 251 (268)
T 1nf2_A 185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMEN---AIEKVKEASDIVTLTNND 251 (268)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTT---SCHHHHHHCSEECCCTTT
T ss_pred eCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEecC---CCHHHHhhCCEEEccCCc
Confidence 3456788899999999999999999999999999999999998665433 344455668888887654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.25 E-value=4e-13 Score=112.81 Aligned_cols=67 Identities=18% Similarity=0.106 Sum_probs=53.7
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
...+.+|+..++.+++.+|++++++++|||+.||++|++.+|+.+++.+ ..+..+..+++++++..+
T Consensus 193 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n---~~~~~~~~a~~v~~~~~~ 259 (282)
T 1rkq_A 193 LDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDN---AIPSVKEVANFVTKSNLE 259 (282)
T ss_dssp EETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTT---SCHHHHHHCSEECCCTTT
T ss_pred cCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEecC---CcHHHHhhCCEEecCCCc
Confidence 3456678899999999999999999999999999999999998544322 234455678888877654
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=2.2e-13 Score=112.91 Aligned_cols=61 Identities=8% Similarity=-0.068 Sum_probs=50.1
Q ss_pred cCCCCCCHHHHHHHHHHcCCCC--CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEP--SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~--~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
... ++|+..++++++.+|+++ +++++|||+.||++|++.+|+.+++.+... . .++++..+.
T Consensus 172 ~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na~~----~--~~~~~~~~~ 234 (259)
T 3zx4_A 172 AKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVGRGDP----P--EGVLATPAP 234 (259)
T ss_dssp ESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECSSSCC----C--TTCEECSSC
T ss_pred cCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeCChhh----c--CCcEEeCCC
Confidence 445 888999999999999999 999999999999999999998877766622 2 445666554
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=99.25 E-value=5.9e-11 Score=97.07 Aligned_cols=86 Identities=15% Similarity=0.238 Sum_probs=63.8
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCCh----HHHHHHHHhhcCCccccc-eeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~----~~~~~~l~~~~gl~~~fd-~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
...+++||+.++++.++++|++++++|+.+. ..+...+ +.+|+..+++ .++...+ ++.....++.+...|
T Consensus 98 g~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~----~~~K~~~r~~L~~~g 172 (260)
T 3pct_A 98 RQSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDM-KRLGFTGVNDKTLLLKKD----KSNKSVRFKQVEDMG 172 (260)
T ss_dssp TCCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHH-HHHTCCCCSTTTEEEESS----CSSSHHHHHHHHTTT
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHH-HHcCcCccccceeEecCC----CCChHHHHHHHHhcC
Confidence 3578999999999999999999999999865 4677788 7889977664 4443322 222344455555545
Q ss_pred CCCCcEEEEeCCHhhHHH
Q 023109 163 MEPSSSLVIEDSVIGVVA 180 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~ 180 (287)
. .-+++|||+.+|+.+
T Consensus 173 y--~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 173 Y--DIVLFVGDNLNDFGD 188 (260)
T ss_dssp C--EEEEEEESSGGGGCG
T ss_pred C--CEEEEECCChHHcCc
Confidence 4 349999999999998
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.8e-11 Score=99.13 Aligned_cols=86 Identities=15% Similarity=0.185 Sum_probs=62.9
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCCh----HHHHHHHHhhcCCccccc-eeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFS-VIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~----~~~~~~l~~~~gl~~~fd-~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
...++.||+.++++.++++|++++++|+.+. ..+...+ +.+|+..+++ .++..+. ...+...+.. +...|
T Consensus 98 ~~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L-~~lGi~~~~~~~Lilr~~---~~~K~~~r~~-l~~~G 172 (262)
T 3ocu_A 98 RQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDM-KRLGFNGVEESAFYLKKD---KSAKAARFAE-IEKQG 172 (262)
T ss_dssp TCCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHH-HHHTCSCCSGGGEEEESS---CSCCHHHHHH-HHHTT
T ss_pred CCCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHH-HHcCcCcccccceeccCC---CCChHHHHHH-HHhcC
Confidence 4578999999999999999999999998865 4677778 7889976663 4443332 1233444444 44444
Q ss_pred CCCCcEEEEeCCHhhHHH
Q 023109 163 MEPSSSLVIEDSVIGVVA 180 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~ 180 (287)
.. -+++|||+.+|+.+
T Consensus 173 y~--iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 173 YE--IVLYVGDNLDDFGN 188 (262)
T ss_dssp EE--EEEEEESSGGGGCS
T ss_pred CC--EEEEECCChHHhcc
Confidence 33 49999999999997
|
| >2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.8e-10 Score=102.59 Aligned_cols=100 Identities=20% Similarity=0.214 Sum_probs=81.3
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC-------------CccccceeeccCCcCCCCCCH----
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG-------------WNESFSVIVGSDEVRTGKPSP---- 151 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~g-------------l~~~fd~i~~~~~~~~~kp~~---- 151 (287)
.+...|++..+|+.+++.| ++.++||++...++..+...+| |.++||.|+... .||..
T Consensus 244 Yv~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A----~KP~FF~~~ 318 (555)
T 2jc9_A 244 YVVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDA----RKPLFFGEG 318 (555)
T ss_dssp HBCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESC----CTTGGGTTC
T ss_pred hcCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeC----CCCCcccCC
Confidence 3566789999999999999 9999999999999988833336 567899866432 22221
Q ss_pred -------------------------HH-----HHHHHHHcCCCCCcEEEEeCCH-hhHHHHH-HcCCeEEEECC
Q 023109 152 -------------------------DI-----FLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (287)
Q Consensus 152 -------------------------~~-----~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~-~aG~~~i~v~~ 193 (287)
.. +.++++.+|..+++++||||+. .||..++ .+|+.+++|..
T Consensus 319 ~pfr~Vd~~tg~l~~~~~~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP 392 (555)
T 2jc9_A 319 TVLRQVDTKTGKLKIGTYTGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP 392 (555)
T ss_dssp CCEEEEETTTTEECSSCCCSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred CcceEeecCCCccccccccccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence 11 4888999999999999999999 8999997 99999999977
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=99.16 E-value=5e-12 Score=107.10 Aligned_cols=66 Identities=14% Similarity=0.064 Sum_probs=53.4
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeC-CccC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVIN-SLLD 213 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~-~l~e 213 (287)
..+.+++..++.+++.+|++++++++|||+.||++|++.+|+.+++.+. .+..+..++++++ +..+
T Consensus 220 ~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~na---~~~~k~~a~~v~~~~~~~ 286 (301)
T 2b30_A 220 KLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANA---TDSAKSHAKCVLPVSHRE 286 (301)
T ss_dssp ETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTC---CHHHHHHSSEECSSCTTT
T ss_pred CCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEEcCC---cHHHHhhCCEEEccCCCC
Confidence 4566788999999999999999999999999999999999986553332 4445567888887 6553
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-12 Score=101.14 Aligned_cols=98 Identities=11% Similarity=0.088 Sum_probs=87.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
.+..+||+.++|+++++. ++++|+|++.+.+++.++ +.++...+|+.+++.+++...| +.|.+.++.+|.++++|
T Consensus 66 ~v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl-~~ld~~~~f~~~l~rd~~~~~k---~~~lK~L~~Lg~~~~~~ 140 (195)
T 2hhl_A 66 YVLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVA-DLLDRWGVFRARLFRESCVFHR---GNYVKDLSRLGRELSKV 140 (195)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCCSSCEEEEECGGGCEEET---TEEECCGGGSSSCGGGE
T ss_pred EEEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHH-HHhCCcccEEEEEEcccceecC---CceeeeHhHhCCChhHE
Confidence 356789999999999998 999999999999999999 8899999999999988776555 45788899999999999
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEE
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
++|||++.++.++.++|+.+...
T Consensus 141 vivDDs~~~~~~~~~ngi~i~~~ 163 (195)
T 2hhl_A 141 IIVDNSPASYIFHPENAVPVQSW 163 (195)
T ss_dssp EEEESCGGGGTTCGGGEEECCCC
T ss_pred EEEECCHHHhhhCccCccEEeee
Confidence 99999999999999999876444
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=99.03 E-value=1.5e-11 Score=96.06 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=84.5
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
.+..+||+.++|+++++. ++++|+|++.+.+++.++ +.++...+|+.+++.+++...| +.+.+.++.+|.++++|
T Consensus 53 ~v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl-~~ld~~~~f~~~~~rd~~~~~k---~~~~k~L~~Lg~~~~~~ 127 (181)
T 2ght_A 53 YVLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHR---GNYVKDLSRLGRDLRRV 127 (181)
T ss_dssp EEEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCTTCCEEEEECGGGSEEET---TEEECCGGGTCSCGGGE
T ss_pred EEEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHH-HHHCCCCcEEEEEeccCceecC---CcEeccHHHhCCCcceE
Confidence 356899999999999998 999999999999999999 8899988999999888765443 34677889999999999
Q ss_pred EEEeCCHhhHHHHHHcCCeE
Q 023109 169 LVIEDSVIGVVAGKAAGMEV 188 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~ 188 (287)
++|||++.++.++.++|+.+
T Consensus 128 vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 128 LILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp EEECSCGGGGTTCTTSBCCC
T ss_pred EEEeCCHHHhccCcCCEeEe
Confidence 99999999999999999874
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=98.95 E-value=2.1e-09 Score=90.73 Aligned_cols=97 Identities=18% Similarity=0.113 Sum_probs=66.8
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC-----C-----------cCCCCCCHH
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD-----E-----------VRTGKPSPD 152 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~-----~-----------~~~~kp~~~ 152 (287)
..++.||+.++++.|++.|++++++|++....++..+ +.+|+...-..+++.. + ....|+.+.
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~-~~~g~~~~~~~i~~n~l~~~~~~~~~~~~~~~i~~~~k~~~~ 217 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 217 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHH-HHTTCCCTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHH-HHcCCCcccceEEeeeEEEcccceeEeccccccchhhcccHH
Confidence 5789999999999999999999999999999999988 7788753322232211 0 011222222
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
.-......+.-..+.++++||+.||++|++.+..
T Consensus 218 ~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~ 251 (297)
T 4fe3_A 218 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN 251 (297)
T ss_dssp HTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSC
T ss_pred HHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccc
Confidence 2122233344456789999999999999875443
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.88 E-value=9.2e-08 Score=83.26 Aligned_cols=94 Identities=15% Similarity=0.068 Sum_probs=64.0
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccC-----C-------c-CCCCCCHHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSD-----E-------V-RTGKPSPDIFL 155 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~-----~-------~-~~~kp~~~~~~ 155 (287)
+++|++.++++.|+++|++++|+|++....++.+. +.+|+...+ +.|++.. + . .......+...
T Consensus 221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia-~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~~p~~~~~gK~ 299 (385)
T 4gxt_A 221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFA-TDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKDFPISIREGKV 299 (385)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HCTTSSCCCCGGGEEEECEEECTTCCEEEEECTTSCCCSTHHHH
T ss_pred eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHH-HHhCcccCCCcceEEEeEEEEecCCceeeeecCccceeCCCchH
Confidence 36999999999999999999999999999999888 777653222 3333321 0 0 00112223333
Q ss_pred HHHHHc---CCCCCcEEEEeCCHhhHHHHHHcC
Q 023109 156 EAAKRL---NMEPSSSLVIEDSVIGVVAGKAAG 185 (287)
Q Consensus 156 ~~~~~l---~~~~~~~l~iGDs~~Dv~~a~~aG 185 (287)
..++.+ ......++++|||.+|++|.+..+
T Consensus 300 ~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~ 332 (385)
T 4gxt_A 300 QTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFD 332 (385)
T ss_dssp HHHHHHTCCTTEECCSEEEECSGGGHHHHHHCT
T ss_pred HHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCc
Confidence 344332 233456999999999999999843
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.88 E-value=8.6e-10 Score=90.37 Aligned_cols=67 Identities=18% Similarity=0.054 Sum_probs=52.6
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccC-------CcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTA-------ADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~-------a~~v~~~l~e 213 (287)
...+.+|+..++.+++.+|++++++++|||+.||++|++.+|+.+++.+ ..++.+.. +++++++..+
T Consensus 157 ~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~n---a~~~~k~~a~~~~~~a~~v~~~~~~ 230 (244)
T 1s2o_A 157 LPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRN---AQPELLHWYDQWGDSRHYRAQSSHA 230 (244)
T ss_dssp EETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTT---CCHHHHHHHHHHCCTTEEECSSCHH
T ss_pred ccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEcC---CcHHHHHHHhcccccceeecCCcch
Confidence 4567788999999999999999999999999999999999998655532 24444443 6777776543
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.7e-09 Score=88.87 Aligned_cols=65 Identities=5% Similarity=-0.171 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHHHcCC-CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 147 GKPSPDIFLEAAKRLNM-EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~-~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
+..|+.+++.+++.+++ +++++++|||+.||++|++.+|+.+++.+.. .++.+..|++++++..+
T Consensus 177 g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~gna~--~~~~~~~a~~v~~~~~~ 242 (249)
T 2zos_A 177 NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSLK--HKKAQNVSSIIDVLEVI 242 (249)
T ss_dssp SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSCC--CTTEEEESSHHHHHHHH
T ss_pred CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEeCCCC--ccccchhceEEeccccc
Confidence 66778899999999998 9999999999999999999999887665541 13445557777666543
|
| >4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A | Back alignment and structure |
|---|
Probab=98.78 E-value=2.7e-07 Score=81.32 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=79.6
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCccccceeeccCC-----------------c
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------V 144 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~--------gl~~~fd~i~~~~~-----------------~ 144 (287)
+...|.+..+|+.+++.|.++.++||++-.+++..+.-.+ .+.++||.|++... .
T Consensus 185 i~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~ 264 (470)
T 4g63_A 185 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 264 (470)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTT
T ss_pred hhCCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCC
Confidence 4457899999999999999999999999999888774434 47789999886421 0
Q ss_pred C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHH-cCCeEEEECC
Q 023109 145 R-------TGKPS---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKA-AGMEVVAVPS 193 (287)
Q Consensus 145 ~-------~~kp~---~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~-aG~~~i~v~~ 193 (287)
+ ..+|. ..-.....+.+|....+++||||+. .||...+. .|+.|++|-.
T Consensus 265 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 325 (470)
T 4g63_A 265 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 325 (470)
T ss_dssp CCEEECCSSCCSEEEEECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred CcccccccccCCceeecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence 0 00110 1224667788899999999999999 79877765 7999999977
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.67 E-value=3.4e-08 Score=91.75 Aligned_cols=111 Identities=13% Similarity=0.150 Sum_probs=84.2
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-++.|++.+.+++++++|++++++|+.+...++... +.+|+...|..+. +..| ...++.+... +.++
T Consensus 456 D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~~~~~~~~-------P~~K----~~~v~~l~~~-~~v~ 522 (645)
T 3j08_A 456 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAEVL-------PHQK----SEEVKKLQAK-EVVA 522 (645)
T ss_dssp CCCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSCC-------TTCH----HHHHHHHTTT-CCEE
T ss_pred CCchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHcCCCEEEEeCC-------HHhH----HHHHHHHhhC-CeEE
Confidence 468899999999999999999999999999999888 8888854333221 2233 4455555555 8999
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~ 216 (287)
||||+.||+++.+.||+.+.+.+ ..+..+..+|+++ +++..+..
T Consensus 523 ~vGDg~ND~~al~~A~vgiamg~---g~~~a~~~AD~vl~~~~~~~i~~ 568 (645)
T 3j08_A 523 FVGDGINDAPALAQADLGIAVGS---GSDVAVESGDIVLIRDDLRDVVA 568 (645)
T ss_dssp EEECSSSCHHHHHHSSEEEEECC---CSCCSSCCSSSEESSCCTTHHHH
T ss_pred EEeCCHhHHHHHHhCCEEEEeCC---CcHHHHHhCCEEEecCCHHHHHH
Confidence 99999999999999996666553 3455677888888 55555543
|
| >3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118} | Back alignment and structure |
|---|
Probab=98.58 E-value=2.5e-09 Score=84.44 Aligned_cols=93 Identities=13% Similarity=0.070 Sum_probs=73.9
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc-cccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN-ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~-~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
+..+||+.++|+.+. +++.++|.|++...+++.++ +.++.. .+|+..+..+.+.... ..+.+.++.+|.++++|
T Consensus 58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl-~~LDp~~~~f~~rl~R~~c~~~~---g~y~KdL~~Lgrdl~~v 132 (204)
T 3qle_A 58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIA-EKLDPIHAFVSYNLFKEHCVYKD---GVHIKDLSKLNRDLSKV 132 (204)
T ss_dssp EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHTSTTCSSEEEEECGGGSEEET---TEEECCGGGSCSCGGGE
T ss_pred EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHH-HHhCCCCCeEEEEEEecceeEEC---CeeeecHHHhCCChHHE
Confidence 568999999999998 67999999999999999999 888876 4788777666543221 22456788889999999
Q ss_pred EEEeCCHhhHHHHHHcCCe
Q 023109 169 LVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~ 187 (287)
++|+|+++-+..-...|+.
T Consensus 133 IiIDDsp~~~~~~p~N~I~ 151 (204)
T 3qle_A 133 IIIDTDPNSYKLQPENAIP 151 (204)
T ss_dssp EEEESCTTTTTTCGGGEEE
T ss_pred EEEECCHHHHhhCccCceE
Confidence 9999999877665555543
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.55 E-value=1.7e-07 Score=88.30 Aligned_cols=111 Identities=13% Similarity=0.150 Sum_probs=83.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-++.|++.+.++.|++.|++++++|+.+...+.... +.+|+...+..+ . +..| ...++.+... +.++
T Consensus 534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia-~~lgi~~~~~~~-----~--P~~K----~~~v~~l~~~-~~v~ 600 (723)
T 3j09_A 534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLDLVIAEV-----L--PHQK----SEEVKKLQAK-EVVA 600 (723)
T ss_dssp CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCSEEECSC-----C--TTCH----HHHHHHHTTT-CCEE
T ss_pred CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHH-HHcCCcEEEccC-----C--HHHH----HHHHHHHhcC-CeEE
Confidence 478999999999999999999999999999999888 888875333221 1 2223 4455555545 8999
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe--CCccCcCc
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI--NSLLDLRP 216 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~--~~l~el~~ 216 (287)
+|||+.||+++.+.|++.+.+. ...+..+..+|+++ +++..+..
T Consensus 601 ~vGDg~ND~~al~~A~vgiamg---~g~~~a~~~AD~vl~~~~~~~i~~ 646 (723)
T 3j09_A 601 FVGDGINDAPALAQADLGIAVG---SGSDVAVESGDIVLIRDDLRDVVA 646 (723)
T ss_dssp EEECSSTTHHHHHHSSEEEECC---CCSCCSSCCSSEECSSCCTTHHHH
T ss_pred EEECChhhHHHHhhCCEEEEeC---CCcHHHHHhCCEEEeCCCHHHHHH
Confidence 9999999999999999655544 33556678889998 45554443
|
| >3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=98.53 E-value=8.8e-09 Score=88.78 Aligned_cols=81 Identities=16% Similarity=0.159 Sum_probs=65.0
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-ccc-eeeccCCcCCCCCCHHHHHHHHHHc-CCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFS-VIVGSDEVRTGKPSPDIFLEAAKRL-NMEP 165 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~-~fd-~i~~~~~~~~~kp~~~~~~~~~~~l-~~~~ 165 (287)
.+..+||+.+||+.+. .++.++|+|++...+++.++ +.++... +|+ .+++.++++.. +.+-+..+ |.++
T Consensus 73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl-~~LDp~~~~f~~ri~sr~~~g~~------~~KdL~~L~~~dl 144 (372)
T 3ef0_A 73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDT 144 (372)
T ss_dssp EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHH-HHHCTTSCSSSSCEECTTTSSCS------SCCCGGGTCSSCC
T ss_pred EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHH-HHhccCCceeeeEEEEecCCCCc------ceecHHHhcCCCC
Confidence 5678999999999998 66999999999999999999 8888776 687 67766655421 22345554 8999
Q ss_pred CcEEEEeCCHhh
Q 023109 166 SSSLVIEDSVIG 177 (287)
Q Consensus 166 ~~~l~iGDs~~D 177 (287)
+++++|+|++.-
T Consensus 145 ~~viiiDd~~~~ 156 (372)
T 3ef0_A 145 SMVVVIDDRGDV 156 (372)
T ss_dssp TTEEEEESCSGG
T ss_pred ceEEEEeCCHHH
Confidence 999999999853
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=2.1e-06 Score=72.97 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=34.2
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhh
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~ 128 (287)
.++|++.++++.++++|+.++|+|++....++... ..
T Consensus 143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a-~~ 179 (327)
T 4as2_A 143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVA-AD 179 (327)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-TC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hh
Confidence 57899999999999999999999999999999888 54
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=98.47 E-value=2.2e-07 Score=87.33 Aligned_cols=106 Identities=13% Similarity=0.066 Sum_probs=83.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
-++.|++.+.+++|++.|++++++|+.+...++.+. +.+|+...+..+ .|+-....++.+...++.++
T Consensus 553 D~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia-~~lgi~~v~a~~-----------~P~~K~~~v~~l~~~g~~V~ 620 (736)
T 3rfu_A 553 DPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA-GTLGIKKVVAEI-----------MPEDKSRIVSELKDKGLIVA 620 (736)
T ss_dssp CCBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHH-HHHTCCCEECSC-----------CHHHHHHHHHHHHHHSCCEE
T ss_pred ccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCCEEEEec-----------CHHHHHHHHHHHHhcCCEEE
Confidence 468899999999999999999999999999999888 888875432211 24445566666665678899
Q ss_pred EEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 170 ~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
||||+.||+++.+.|++.+++.+. .+..+..+|+++.+
T Consensus 621 ~vGDG~ND~paL~~AdvGIAmg~g---~d~a~~~AD~vl~~ 658 (736)
T 3rfu_A 621 MAGDGVNDAPALAKADIGIAMGTG---TDVAIESAGVTLLH 658 (736)
T ss_dssp EEECSSTTHHHHHHSSEEEEESSS---CSHHHHHCSEEECS
T ss_pred EEECChHhHHHHHhCCEEEEeCCc---cHHHHHhCCEEEcc
Confidence 999999999999999977666532 45567788888843
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=98.46 E-value=2e-07 Score=90.85 Aligned_cols=123 Identities=13% Similarity=0.020 Sum_probs=86.2
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccc----eeeccCCcCCCC----------------C
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFS----VIVGSDEVRTGK----------------P 149 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd----~i~~~~~~~~~k----------------p 149 (287)
-++.|++.+.++.|++.|++++++|+.+...+..+. +.+|+....+ .++.+++....+ -
T Consensus 602 D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia-~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~~~v~~r~ 680 (995)
T 3ar4_A 602 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARV 680 (995)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHHCCEEESC
T ss_pred CCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhhCcEEEEe
Confidence 468899999999999999999999999999999888 8888854321 222222111111 1
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC--ccCcCc
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS--LLDLRP 216 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~--l~el~~ 216 (287)
.|+-..++.+.+.-..+.++++||+.||++|.+.|++.+++. + ..+..+..+|+++.+ +..+..
T Consensus 681 ~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~--g~~~ak~aAd~vl~~~~~~~i~~ 746 (995)
T 3ar4_A 681 EPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-S--GTAVAKTASEMVLADDNFSTIVA 746 (995)
T ss_dssp CSSHHHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-T--SCHHHHHTCSEEETTCCHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-C--CCHHHHHhCCEEECCCCHHHHHH
Confidence 123345555555555689999999999999999999877764 2 233456678888843 554443
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=83.80 Aligned_cols=117 Identities=16% Similarity=0.099 Sum_probs=81.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc------------------------cceeeccCCc--
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES------------------------FSVIVGSDEV-- 144 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~------------------------fd~i~~~~~~-- 144 (287)
+++|++.+.+++|++.|++++++|+.+...+..+. +.+|+... +..++.+++.
T Consensus 599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~ 677 (1028)
T 2zxe_A 599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIA-KGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKD 677 (1028)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTT
T ss_pred CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHH-HHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhh
Confidence 67899999999999999999999999999998888 77787521 0111111100
Q ss_pred ----------------CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEe
Q 023109 145 ----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVI 208 (287)
Q Consensus 145 ----------------~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~ 208 (287)
......|+....+.+.+.-..+.++++||+.||++|.+.|++.+++..++ .+..+..+|+++
T Consensus 678 ~~~~~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~g--td~ak~aAD~Vl 755 (1028)
T 2zxe_A 678 LSTEVLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISG--SDVSKQAADMIL 755 (1028)
T ss_dssp CCHHHHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSC--CHHHHHHCSEEE
T ss_pred CCHHHHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCcc--CHHHHHhcCEEe
Confidence 11223455555555554444578999999999999999999887765322 333456788887
Q ss_pred CC
Q 023109 209 NS 210 (287)
Q Consensus 209 ~~ 210 (287)
.+
T Consensus 756 ~~ 757 (1028)
T 2zxe_A 756 LD 757 (1028)
T ss_dssp TT
T ss_pred cC
Confidence 55
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=98.16 E-value=2.9e-06 Score=82.97 Aligned_cols=120 Identities=14% Similarity=0.051 Sum_probs=82.8
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc------------------------ceeeccCCc-
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF------------------------SVIVGSDEV- 144 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f------------------------d~i~~~~~~- 144 (287)
-++.|++.+.+++++++|++++++|+.+...+..+. +.+|+...- ..++.+.+.
T Consensus 603 Dp~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia-~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 681 (1034)
T 3ixz_A 603 DPPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIA-ASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLK 681 (1034)
T ss_pred CCCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHH-HHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhh
Confidence 478999999999999999999999999999988888 777874210 011111100
Q ss_pred -----------------CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEE
Q 023109 145 -----------------RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV 207 (287)
Q Consensus 145 -----------------~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v 207 (287)
....-.|+....+.+.+.-..+-++++||+.||++|.+.||+.+++..+ ..+..+..+|++
T Consensus 682 ~~~~~~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~n--g~d~aK~aAD~V 759 (1034)
T 3ixz_A 682 DMDPSELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIA--GSDAAKNAADMI 759 (1034)
T ss_pred hCCHHHHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCc--cCHHHHHhcCEE
Confidence 0111234444444555544456799999999999999999987776522 245567788888
Q ss_pred eCCcc
Q 023109 208 INSLL 212 (287)
Q Consensus 208 ~~~l~ 212 (287)
+.+..
T Consensus 760 l~~~~ 764 (1034)
T 3ixz_A 760 LLDDN 764 (1034)
T ss_pred eccCC
Confidence 86643
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=98.10 E-value=4.5e-06 Score=80.12 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=80.6
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-c--e-eecc----------------CCcCCCCCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-S--V-IVGS----------------DEVRTGKPS 150 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d--~-i~~~----------------~~~~~~kp~ 150 (287)
+++|++.+.+++|++.|+++.++|+-+...+..+. +.+|+.... + . ++.+ +......|
T Consensus 535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA-~~lGI~~~~~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv~P- 612 (920)
T 1mhs_A 535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS-RQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEAADGFAEVFP- 612 (920)
T ss_dssp CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHH-HHHTSSCSCCCSSSSSSCBCCCGGGGGGGTTTTTTSCEESCCS-
T ss_pred cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHH-HHcCCCccccCccceeecCcccCCHHHHHHHHhhCeEEEEeCH-
Confidence 68999999999999999999999999999999888 888885311 0 0 0000 00112233
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
+-...+.+.+.-..+.+.|+||+.||.++.+.|++.+++.+ ..+..+..+|.++.+
T Consensus 613 -~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~---gtd~ak~aADiVl~~ 668 (920)
T 1mhs_A 613 -QHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAVEG---SSDAARSAADIVFLA 668 (920)
T ss_dssp -THHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEETT---SCHHHHHSSSEEESS
T ss_pred -HHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccccc---ccHHHHHhcCeEEcC
Confidence 33344455554445789999999999999999998777742 234446678888743
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=98.03 E-value=9.5e-06 Score=60.04 Aligned_cols=39 Identities=18% Similarity=0.042 Sum_probs=29.9
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCCh---HHHHHHHHhhcCC
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHR---ATIESKISYQHGW 131 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~---~~~~~~l~~~~gl 131 (287)
+.|++.+.|+.++++|+.++++|+.+. ..+...+ ...|+
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l-~~~gi 66 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC-RARGL 66 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH-HTTTC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHH-HHcCC
Confidence 456899999999999999999999974 3344445 55565
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.93 E-value=4.3e-06 Score=80.16 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=79.8
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc-c-ceeeccCCc-----------------CCCCCCH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES-F-SVIVGSDEV-----------------RTGKPSP 151 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~-f-d~i~~~~~~-----------------~~~kp~~ 151 (287)
+++|++.+.+++|++.|+++.++|+.+...+..+. +.+|+... + +.++.+.+. ....-.|
T Consensus 488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA-~~lGi~~~~~~~~~l~g~~~~~~~~~~~l~~~~~~~~v~arv~P 566 (885)
T 3b8c_A 488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG-RRLGMGTNMYPSSALLGTHKDANLASIPVEELIEKADGFAGVFP 566 (885)
T ss_dssp CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHH-HTTTCTTCCSTTSSCCBGGGGTTSCCSCHHHHHHTSCCEECCCH
T ss_pred ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHH-HHhCCccccCCcceeeccccccccchhHHHHHHhhCcEEEEECH
Confidence 67899999999999999999999999999998888 88888431 0 011111000 0112234
Q ss_pred HHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 152 DIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 152 ~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
+-..++.+.+.-..+.+.|+||+.||.++.+.|++.+++.+ ..+..+..+|+++.+
T Consensus 567 ~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAmg~---gtd~ak~aADivl~~ 622 (885)
T 3b8c_A 567 EHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD---ATDAARGASDIVLTE 622 (885)
T ss_dssp HHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCCSS---SHHHHGGGCSSCCSS
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEeCC---ccHHHHHhcceeecc
Confidence 44455555554445789999999999999999998777642 233445667776643
|
| >3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.81 E-value=9.7e-07 Score=74.55 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=65.3
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcC----CCCCCHHHHHHHHHHc---
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVR----TGKPSPDIFLEAAKRL--- 161 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~----~~kp~~~~~~~~~~~l--- 161 (287)
..+||+.+||+.+.+. +.++|.|++...+++.++ +.++....+ ...+..+.+. ..+..+..+.+-+..+
T Consensus 164 ~~RP~l~eFL~~l~~~-yeivIfTas~~~ya~~vl-d~Ld~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~vKdLs~Lw~~ 241 (320)
T 3shq_A 164 LMRPYLHEFLTSAYED-YDIVIWSATSMRWIEEKM-RLLGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWAL 241 (320)
T ss_dssp HBCTTHHHHHHHHHHH-EEEEEECSSCHHHHHHHH-HHTTCTTCSSCCCCEEECGGGCEEEEETTTEEEEECCHHHHHHH
T ss_pred EeCCCHHHHHHHHHhC-CEEEEEcCCcHHHHHHHH-HHhCCCCCcceeEEEEEcCCccccccccCCCCEEEEEhHHhhcc
Confidence 3689999999999864 999999999999999999 877765443 2112112111 0111112234456666
Q ss_pred --CCCCCcEEEEeCCHhhHHHHHHcCCe
Q 023109 162 --NMEPSSSLVIEDSVIGVVAGKAAGME 187 (287)
Q Consensus 162 --~~~~~~~l~iGDs~~Dv~~a~~aG~~ 187 (287)
|.+++++++|+|++.-.......|+.
T Consensus 242 ~p~rdl~~tIiIDdsp~~~~~~p~NgI~ 269 (320)
T 3shq_A 242 YKQYNSSNTIMFDDIRRNFLMNPKSGLK 269 (320)
T ss_dssp CTTCCGGGEEEEESCGGGGTTSGGGEEE
T ss_pred cCCCChhHEEEEeCChHHhccCcCceEE
Confidence 88899999999999877666666643
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.80 E-value=3.4e-05 Score=63.97 Aligned_cols=63 Identities=8% Similarity=-0.126 Sum_probs=34.8
Q ss_pred CHHHHHHHHHHcC-CCCCc--EEEEeCCHhhHHHHHHcCCeEEEECCCCCcccccc--CCc-EEeCCcc
Q 023109 150 SPDIFLEAAKRLN-MEPSS--SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYT--AAD-EVINSLL 212 (287)
Q Consensus 150 ~~~~~~~~~~~l~-~~~~~--~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~--~a~-~v~~~l~ 212 (287)
|+..+..+++.+| +++++ +++|||+.||++|++.+|+.+++.+.....+..+. .++ +++++..
T Consensus 190 K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~~n~~~~~~~~~~~~~a~~~v~~~~~ 258 (275)
T 1xvi_A 190 KDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREG 258 (275)
T ss_dssp HHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECCCCC---------------------
T ss_pred HHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEecCCCccchhhccccCCceeEccCCC
Confidence 3455566677778 88888 99999999999999999986555444222233332 256 6665544
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=97.74 E-value=8.5e-06 Score=67.63 Aligned_cols=16 Identities=50% Similarity=0.602 Sum_probs=14.6
Q ss_pred CccEEEEecCCccccc
Q 023109 8 LMSCVILDLDGTLLNT 23 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~ 23 (287)
++|+|+||+||||++.
T Consensus 8 ~~~li~~DlDGTLl~~ 23 (275)
T 1xvi_A 8 QPLLVFSDLDGTLLDS 23 (275)
T ss_dssp CCEEEEEECTTTTSCS
T ss_pred CceEEEEeCCCCCCCC
Confidence 5799999999999985
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.74 E-value=3.1e-05 Score=63.14 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=25.1
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l 125 (287)
+...+.|++++++|++++++|+++...+...+
T Consensus 24 ~~~~~~l~~l~~~g~~~~iaTGR~~~~~~~~l 55 (246)
T 3f9r_A 24 DEMRALIKRARGAGFCVGTVGGSDFAKQVEQL 55 (246)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEECCCCHHHHHHHh
Confidence 34456789999999999999999888665444
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=97.67 E-value=2e-05 Score=57.29 Aligned_cols=29 Identities=3% Similarity=0.047 Sum_probs=24.8
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRA 119 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~ 119 (287)
.+.++..+.+++++++|++++++|+.+..
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~ 52 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMR 52 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence 45678889999999999999999998653
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00036 Score=56.59 Aligned_cols=19 Identities=26% Similarity=0.336 Sum_probs=15.5
Q ss_pred cCCccEEEEecCCcccccH
Q 023109 6 KKLMSCVILDLDGTLLNTD 24 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~ 24 (287)
.+++|+|+||+||||++.+
T Consensus 3 ~~~~kli~~DlDGTLl~~~ 21 (246)
T 2amy_A 3 APGPALCLFDVDGTLTAPR 21 (246)
T ss_dssp -CCSEEEEEESBTTTBCTT
T ss_pred CCCceEEEEECCCCcCCCC
Confidence 3468999999999999863
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00062 Score=55.04 Aligned_cols=54 Identities=11% Similarity=0.030 Sum_probs=44.7
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHc--CCeEEEECCCCCccccccCCcEEeCC
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA--GMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~a--G~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
..+-.|..+++.+++.+| +++|||+.||++|.+.+ |..+++.+. +..+++++++
T Consensus 156 ~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~g~~vam~Na-------~~~A~~v~~~ 211 (239)
T 1u02_A 156 VPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDDALTIKVGEG-------ETHAKFHVAD 211 (239)
T ss_dssp CTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTTSEEEEESSS-------CCCCSEEESS
T ss_pred cCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhCCcEEEECCC-------CCcceEEeCC
Confidence 455667889999999888 99999999999999999 988887765 2456777776
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00055 Score=56.13 Aligned_cols=19 Identities=32% Similarity=0.394 Sum_probs=15.0
Q ss_pred CCccEEEEecCCcccccHH
Q 023109 7 KLMSCVILDLDGTLLNTDG 25 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~ 25 (287)
.++|+|+||+||||++.+.
T Consensus 11 ~~~kli~~DlDGTLl~~~~ 29 (262)
T 2fue_A 11 KERVLCLFDVDGTLTPARQ 29 (262)
T ss_dssp --CEEEEEESBTTTBSTTS
T ss_pred cCeEEEEEeCccCCCCCCC
Confidence 4579999999999998743
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00015 Score=59.50 Aligned_cols=63 Identities=5% Similarity=-0.204 Sum_probs=46.3
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGD----s~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
..+..|..+++.+ +|++++++++||| +.||++|.+.+|...+.+. ...+..+..+++++++..
T Consensus 193 ~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~--NA~~~~k~~a~~v~~~~~ 259 (262)
T 2fue_A 193 PEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV--SPQDTVQRCREIFFPETA 259 (262)
T ss_dssp ETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS--SHHHHHHHHHHHHCTTC-
T ss_pred cCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec--CCCHHHHHhhheeCCCCc
Confidence 3455566777777 8999999999999 9999999999997555553 334555666777766544
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00054 Score=55.39 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=27.8
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l 125 (287)
+.+...+.|++++++| +++++|+.+...+...+
T Consensus 24 i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~ 56 (239)
T 1u02_A 24 ADAGLLSLISDLKERF-DTYIVTGRSPEEISRFL 56 (239)
T ss_dssp CCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHS
T ss_pred CCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHh
Confidence 4456778899999999 99999999998887666
|
| >3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=95.99 E-value=0.011 Score=51.71 Aligned_cols=80 Identities=15% Similarity=0.163 Sum_probs=62.0
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc-ccce-eeccCCcCCCCCCHHHHHHHHHH-cCCCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE-SFSV-IVGSDEVRTGKPSPDIFLEAAKR-LNMEP 165 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~-~fd~-i~~~~~~~~~kp~~~~~~~~~~~-l~~~~ 165 (287)
.+..+||+.+||+++. ..+.++|+|++.+.++..++ +.++... +|.. +++.+.++.. +.+-+.. +|.+.
T Consensus 81 ~V~~RPgl~eFL~~ls-~~yEivIfTas~~~YA~~Vl-~~LDp~~~~f~~Rl~sRd~cg~~------~~KdL~~ll~rdl 152 (442)
T 3ef1_A 81 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVA-KIIDPTGKLFQDRVLSRDDSGSL------AQKSLRRLFPCDT 152 (442)
T ss_dssp EEEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHH-HHHCTTSTTTTTCEECTTTSSCS------SCCCGGGTCSSCC
T ss_pred EEEeCCCHHHHHHHHh-CCcEEEEEcCCCHHHHHHHH-HHhccCCccccceEEEecCCCCc------eeeehHHhcCCCc
Confidence 4678999999999998 56999999999999999999 8887766 5765 6656655431 1122443 48889
Q ss_pred CcEEEEeCCHh
Q 023109 166 SSSLVIEDSVI 176 (287)
Q Consensus 166 ~~~l~iGDs~~ 176 (287)
+.+++|+|++.
T Consensus 153 ~~vvIIDd~p~ 163 (442)
T 3ef1_A 153 SMVVVIDDRGD 163 (442)
T ss_dssp TTEEEEESCSG
T ss_pred ceEEEEECCHH
Confidence 99999999984
|
| >3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A | Back alignment and structure |
|---|
Probab=95.79 E-value=0.13 Score=41.06 Aligned_cols=91 Identities=14% Similarity=0.177 Sum_probs=65.6
Q ss_pred HHHHHHHHHC-CCCEEEEeCCChHHHHHHHHhhcCCcccc--ceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q 023109 97 NRLIKHLSCH-GVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173 (287)
Q Consensus 97 ~~~l~~l~~~-g~~v~l~T~~~~~~~~~~l~~~~gl~~~f--d~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGD 173 (287)
...|....++ +..-+++|++.-.-.-.++ --+|+...| +.|+++-.+ +|...|+++.+++| +.-..++|||
T Consensus 165 ~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~-LLygL~~~fpieNIYSa~ki----GKesCFerI~~RFG-~k~~yvvIGD 238 (274)
T 3geb_A 165 LKALNLINSRPNCVNVLVTTTQLIPALAKV-LLYGLGSVFPIENIYSATKT----GKESCFERIMQRFG-RKAVYVVIGD 238 (274)
T ss_dssp HHHHHHHHHSTTEEEEEEESSCHHHHHHHH-HHTTCTTTSCGGGEEETTTT----CHHHHHHHHHHHHC-TTSEEEEEES
T ss_pred HHHHHhhccCCceeEEEEecCchHHHHHHH-HHhhcccceecccccchhhc----CHHHHHHHHHHHhC-CCceEEEECC
Confidence 3444444443 4556778887654444444 446777666 567776543 46789999999997 4468999999
Q ss_pred CHhhHHHHHHcCCeEEEECC
Q 023109 174 SVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 174 s~~Dv~~a~~aG~~~i~v~~ 193 (287)
+...-++|+..++++.-+.+
T Consensus 239 G~eEe~AAk~~n~PFwrI~~ 258 (274)
T 3geb_A 239 GVEEEQGAKKHNMPFWRISC 258 (274)
T ss_dssp SHHHHHHHHHTTCCEEECCS
T ss_pred CHHHHHHHHHcCCCeEEeec
Confidence 99999999999999988776
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=95.02 E-value=0.0043 Score=50.11 Aligned_cols=45 Identities=9% Similarity=-0.151 Sum_probs=32.8
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGD----s~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+..|..+++.+ +|++++++++||| +.||++|.+.+|...+.+.+
T Consensus 185 ~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~N 233 (246)
T 2amy_A 185 DGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 233 (246)
T ss_dssp TTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred CCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEeeC
Confidence 444455566666 8999999999999 99999999999874444433
|
| >3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.082 Score=45.15 Aligned_cols=86 Identities=19% Similarity=0.138 Sum_probs=60.1
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~---~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
+.|++.++++.|++.|++++++||++ .......+.+.+|+.-..+.++++..... ..++ ....+
T Consensus 30 ~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~---------~~~~----~~~~v 96 (352)
T 3kc2_A 30 PIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYK---------SLVN----KYSRI 96 (352)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGG---------GGTT----TCSEE
T ss_pred eCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHH---------HHHh----cCCEE
Confidence 56899999999999999999999985 34444455246788766777776643211 1111 23567
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEE
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
+++|-. .-...++++|+..+..
T Consensus 97 ~viG~~-~l~~~l~~~G~~~v~~ 118 (352)
T 3kc2_A 97 LAVGTP-SVRGVAEGYGFQDVVH 118 (352)
T ss_dssp EEESST-THHHHHHHHTCSEEEE
T ss_pred EEECCH-HHHHHHHhCCCeEecc
Confidence 777754 6678889999998864
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=92.37 E-value=0.023 Score=45.90 Aligned_cols=44 Identities=9% Similarity=-0.165 Sum_probs=33.4
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCC----HhhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDS----VIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs----~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+-.|+.+++++++ +++++++|||+ .||++|.+.+|...+.+.+
T Consensus 184 ~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~n 231 (246)
T 3f9r_A 184 VGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVTS 231 (246)
T ss_dssp TTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCTTSEEEECSS
T ss_pred CCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCCCccEEEeCC
Confidence 44455566666666 88999999996 9999999988866566554
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=92.27 E-value=0.57 Score=37.74 Aligned_cols=83 Identities=27% Similarity=0.349 Sum_probs=54.7
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
+++.+.++.++++|++++++||++... ....+ ..+|+....+.++++. ......++.. .+...+.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l-~~lg~~~~~~~i~~~~---------~~~~~~l~~~-~~~~~v~v 88 (263)
T 1zjj_A 20 PGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKL-LKMGIDVSSSIIITSG---------LATRLYMSKH-LDPGKIFV 88 (263)
T ss_dssp TTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHH-HTTTCCCCGGGEEEHH---------HHHHHHHHHH-SCCCCEEE
T ss_pred ccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhhEEecH---------HHHHHHHHHh-CCCCEEEE
Confidence 678889999999999999999986533 33444 4567765556666542 2223333333 23457888
Q ss_pred EeCCHhhHHHHHHcCCeE
Q 023109 171 IEDSVIGVVAGKAAGMEV 188 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~ 188 (287)
+|+. .....++..|+..
T Consensus 89 iG~~-~l~~~l~~~G~~~ 105 (263)
T 1zjj_A 89 IGGE-GLVKEMQALGWGI 105 (263)
T ss_dssp ESCH-HHHHHHHHHTSCB
T ss_pred EcCH-HHHHHHHHcCCee
Confidence 8874 6677788888753
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=88.73 E-value=0.6 Score=37.54 Aligned_cols=45 Identities=16% Similarity=0.264 Sum_probs=33.5
Q ss_pred cHHHHHHHHHHCCCCEEEEeC---CChHHHHHHHHhhcCCccccceeec
Q 023109 95 GANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVG 140 (287)
Q Consensus 95 g~~~~l~~l~~~g~~v~l~T~---~~~~~~~~~l~~~~gl~~~fd~i~~ 140 (287)
++.+.|++++++|++++++|| .+...+...+ +.+|+....+.+++
T Consensus 26 ~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l-~~lg~~~~~~~ii~ 73 (266)
T 3pdw_A 26 EACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKL-VSFDIPATEEQVFT 73 (266)
T ss_dssp HHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHH-HHTTCCCCGGGEEE
T ss_pred cHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHcCCCCCHHHccC
Confidence 556789999999999999998 4555566677 77787654455554
|
| >2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii} | Back alignment and structure |
|---|
Probab=88.16 E-value=0.71 Score=37.60 Aligned_cols=49 Identities=18% Similarity=0.260 Sum_probs=38.5
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeC---CChHHHHHHHHhhcCCc-cccceeecc
Q 023109 92 ALPGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWN-ESFSVIVGS 141 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~---~~~~~~~~~l~~~~gl~-~~fd~i~~~ 141 (287)
+.+++.+.+++++++|++++++|| .+.......+ +.+|+. ..++.++++
T Consensus 31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l-~~lg~~~~~~~~ii~~ 83 (284)
T 2hx1_A 31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY-HKLGLFSITADKIISS 83 (284)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHH-HHTTCTTCCGGGEEEH
T ss_pred eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHH-HHCCcCCCCHhhEEcH
Confidence 457888899999999999999998 4556666777 777887 666676654
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=86.82 E-value=0.71 Score=37.15 Aligned_cols=47 Identities=19% Similarity=0.408 Sum_probs=35.9
Q ss_pred CcHHHHHHHHHHCCCCEEEEeC---CChHHHHHHHHhhcCCccccceeecc
Q 023109 94 PGANRLIKHLSCHGVPMALASN---SHRATIESKISYQHGWNESFSVIVGS 141 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~---~~~~~~~~~l~~~~gl~~~fd~i~~~ 141 (287)
|++.++|++++++|++++++|| .+...+...+ +.+|+....+.++++
T Consensus 24 ~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l-~~lg~~~~~~~ii~~ 73 (264)
T 3epr_A 24 PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEML-RGFNVETPLETIYTA 73 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHH-HTTTCCCCGGGEEEH
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH-HHCCCCCChhheecH
Confidence 6788899999999999999995 4555666677 777876555556543
|
| >1n08_A Putative riboflavin kinase; phophoryl transferases, flavin cofactors, metal binding; HET: ADP; 1.60A {Schizosaccharomyces pombe} SCOP: b.43.5.1 PDB: 1n05_A* 1n07_A* 1n06_A* | Back alignment and structure |
|---|
Probab=85.20 E-value=0.48 Score=35.43 Aligned_cols=28 Identities=36% Similarity=0.554 Sum_probs=25.5
Q ss_pred CCCCCceeeccceeeeccCccccchhHh
Q 023109 232 LPSEPWYIGGPVVKGLGRGSKLICLQRV 259 (287)
Q Consensus 232 ~~~~p~~~~~~~~~~~~~~~~~l~~~~~ 259 (287)
+.-.|....|.|.+|.+++++.||.|||
T Consensus 19 ~~Grpy~i~G~Vv~G~~rGrr~LGfPTA 46 (163)
T 1n08_A 19 QSPYPIRFEGKVVHGFGRGSKELGIPTA 46 (163)
T ss_dssp CTTCCEEEEEEEECCSSSCGGGGTCCCE
T ss_pred CCCCCEEEEEEEEeCCccCCCccCcCCC
Confidence 4457899999999999999999999999
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=84.75 E-value=0.4 Score=37.12 Aligned_cols=17 Identities=41% Similarity=0.768 Sum_probs=14.9
Q ss_pred CccEEEEecCCcccccH
Q 023109 8 LMSCVILDLDGTLLNTD 24 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~ 24 (287)
..+++++|+||||+++.
T Consensus 27 ~k~~LVLDLD~TLvhs~ 43 (195)
T 2hhl_A 27 GKKCVVIDLDETLVHSS 43 (195)
T ss_dssp TCCEEEECCBTTTEEEE
T ss_pred CCeEEEEccccceEccc
Confidence 46799999999999974
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=84.34 E-value=0.78 Score=39.54 Aligned_cols=22 Identities=27% Similarity=0.599 Sum_probs=18.0
Q ss_pred ccEEEEecCCcccccHHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEV 30 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~ 30 (287)
+|.|+||+|||+++....+..+
T Consensus 1 ~~~~~fdvdgv~~~~~~~~d~~ 22 (384)
T 1qyi_A 1 MKKILFDVDGVFLSEERCFDVS 22 (384)
T ss_dssp CCEEEECSBTTTBCSHHHHHHH
T ss_pred CceEEEecCceeechhhhccHH
Confidence 5789999999999987766543
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=83.66 E-value=1.5 Score=35.70 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=32.3
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcc
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNE 133 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~ 133 (287)
+...+.|++++++|+.++++|+++...+...+ +.+++..
T Consensus 25 ~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~-~~l~l~~ 63 (282)
T 1rkq_A 25 PAVKNAIAAARARGVNVVLTTGRPYAGVHNYL-KELHMEQ 63 (282)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSSCGGGTHHHH-HHTTCCS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHhCCCC
Confidence 45557899999999999999999988888787 7777653
|
| >1nb0_A Hypothetical protein FLJ11149; beta barrel, transferase; HET: ADP; 1.70A {Homo sapiens} SCOP: b.43.5.1 PDB: 1nb9_A* 1p4m_A* 1q9s_A* | Back alignment and structure |
|---|
Probab=82.53 E-value=0.37 Score=35.41 Aligned_cols=34 Identities=35% Similarity=0.730 Sum_probs=27.3
Q ss_pred CCceeeccceeeeccCccccchhHh-HHH-hhccCC
Q 023109 235 EPWYIGGPVVKGLGRGSKLICLQRV-IQM-SFQNIP 268 (287)
Q Consensus 235 ~p~~~~~~~~~~~~~~~~~l~~~~~-~~~-~~~~~~ 268 (287)
.|....|.|.+|.+++++.||.||| +.. .-..+|
T Consensus 3 ~py~i~G~Vv~G~~rGrr~LGfPTANl~~~~~~~~P 38 (147)
T 1nb0_A 3 LPYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLP 38 (147)
T ss_dssp CSEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSC
T ss_pred ccEEEEEEEEeCCccCccccCCccEEEEccccccCC
Confidence 5788999999999999999999999 433 234455
|
| >3bnw_A Riboflavin kinase, putative; APO structure, structural genomics, structural genomics of P protozoa consortium, SGPP, transferase; 2.40A {Trypanosoma brucei} | Back alignment and structure |
|---|
Probab=82.34 E-value=0.45 Score=36.20 Aligned_cols=29 Identities=31% Similarity=0.606 Sum_probs=20.5
Q ss_pred CCCCCCceeeccceeeeccCccccchhHh
Q 023109 231 TLPSEPWYIGGPVVKGLGRGSKLICLQRV 259 (287)
Q Consensus 231 ~~~~~p~~~~~~~~~~~~~~~~~l~~~~~ 259 (287)
.+.-.|....|.|.+|++++++.||+|||
T Consensus 12 ~lLGrpy~i~G~Vv~G~~rGrr~LGfPTA 40 (181)
T 3bnw_A 12 TGSFQPFFLRGKVVHGKGRGGSQLGFPTA 40 (181)
T ss_dssp CTTSCCEEEEEEEEC------CCSCCCCC
T ss_pred HhCCCCeEEEEEEEeCCccCccccCCccc
Confidence 45567899999999999999999999999
|
| >2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=82.01 E-value=4.1 Score=31.36 Aligned_cols=88 Identities=16% Similarity=0.167 Sum_probs=52.3
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHH-HHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEe
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~-~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iG 172 (287)
-++.+.|..+++.+.++++++-.+... ++ .+.+.+++.-.+-.+...++. +...+-++.-|++ +.||
T Consensus 81 ~Dil~al~~a~~~~~kIavvg~~~~~~~~~-~~~~ll~~~i~~~~~~~~~e~-------~~~i~~l~~~G~~----vvVG 148 (196)
T 2q5c_A 81 FDTMRAVYNAKRFGNELALIAYKHSIVDKH-EIEAMLGVKIKEFLFSSEDEI-------TTLISKVKTENIK----IVVS 148 (196)
T ss_dssp HHHHHHHHHHGGGCSEEEEEEESSCSSCHH-HHHHHHTCEEEEEEECSGGGH-------HHHHHHHHHTTCC----EEEE
T ss_pred hHHHHHHHHHHhhCCcEEEEeCcchhhHHH-HHHHHhCCceEEEEeCCHHHH-------HHHHHHHHHCCCe----EEEC
Confidence 456777777777778999997653322 23 232555653111111111221 2223333444544 6899
Q ss_pred CCHhhHHHHHHcCCeEEEECCC
Q 023109 173 DSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 173 Ds~~Dv~~a~~aG~~~i~v~~~ 194 (287)
|+.. ...|++.|++++.+.++
T Consensus 149 ~~~~-~~~A~~~Gl~~vli~sg 169 (196)
T 2q5c_A 149 GKTV-TDEAIKQGLYGETINSG 169 (196)
T ss_dssp CHHH-HHHHHHTTCEEEECCCC
T ss_pred CHHH-HHHHHHcCCcEEEEecC
Confidence 8776 78999999999999885
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 287 | ||||
| d2b0ca1 | 197 | c.108.1.2 (A:8-204) Putative phosphatase YihX {Esc | 5e-20 | |
| d1zs9a1 | 253 | c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapien | 2e-19 | |
| d1te2a_ | 218 | c.108.1.6 (A:) Phosphatase YniC {Escherichia coli | 2e-19 | |
| d1cr6a1 | 222 | c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal | 1e-18 | |
| d2fdra1 | 222 | c.108.1.6 (A:3-224) Hypothetical protein Atu0790 { | 2e-18 | |
| d1o08a_ | 221 | c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcu | 2e-17 | |
| d1zd3a1 | 225 | c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal | 3e-17 | |
| d1swva_ | 257 | c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Ba | 3e-16 | |
| d2fi1a1 | 187 | c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Str | 4e-16 | |
| d2g80a1 | 225 | c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast | 3e-15 | |
| d1zrna_ | 220 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pse | 4e-15 | |
| d2go7a1 | 204 | c.108.1.6 (A:3-206) Hypothetical protein SP2064 {S | 2e-14 | |
| d2hdoa1 | 207 | c.108.1.6 (A:1-207) Phosphoglycolate phosphatase { | 2e-14 | |
| d1qq5a_ | 245 | c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xan | 3e-14 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 3e-14 | |
| d2hcfa1 | 228 | c.108.1.6 (A:2-229) Hypothetical protein CT1708 {C | 2e-13 | |
| d1u7pa_ | 164 | c.108.1.17 (A:) Magnesium-dependent phosphatase-1, | 2e-13 | |
| d2hsza1 | 224 | c.108.1.6 (A:1-224) Phosphoglycolate phosphatase G | 2e-13 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 2e-12 | |
| d2ah5a1 | 210 | c.108.1.6 (A:1-210) predicted phosphatase SP0104 { | 6e-10 | |
| d2gfha1 | 247 | c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatas | 1e-09 | |
| d1x42a1 | 230 | c.108.1.1 (A:1-230) Hypothetical protein PH0459 {A | 3e-09 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 2e-05 | |
| d2fpwa1 | 161 | c.108.1.19 (A:3-163) Histidine biosynthesis bifunc | 3e-05 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 4e-04 | |
| d1yv9a1 | 253 | c.108.1.14 (A:4-256) Putative hydrolase EF1188 {En | 0.001 | |
| d2c4na1 | 250 | c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId | 0.002 | |
| d2o2xa1 | 209 | c.108.1.19 (A:8-216) Hypothetical protein Mll2559 | 0.002 | |
| d1wvia_ | 253 | c.108.1.14 (A:) Putative phosphatase SMU.1415c {St | 0.003 |
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} Length = 197 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Score = 83.7 bits (205), Expect = 5e-20
Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 10/188 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLE------EAAIIVED 65
I DL +++ D F+ VL + +K +G+ + E
Sbjct: 3 YIFDLGNVIVDID--FNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEA 60
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
A + + ++ P ++ L G + + SN++R
Sbjct: 61 LCHEMALPLSYEQFSHGWQAVFVALR--PEVIAIMHKLREQGHRVVVLSNTNRLHTTFWP 118
Query: 126 SYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAG 185
++ I S ++ KP I+ + PS ++ +D+ + G
Sbjct: 119 EEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLG 178
Query: 186 MEVVAVPS 193
+ + V
Sbjct: 179 ITSILVKD 186
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Score = 82.9 bits (203), Expect = 2e-19
Identities = 29/243 (11%), Positives = 67/243 (27%), Gaps = 40/243 (16%)
Query: 12 VILDLDGTLLNTD-------GMFSEVLKTFLVKYGKEWDGREKHKIVGKTPL-------- 56
++LD++GT E +K +L + +E + ++ ++ K
Sbjct: 10 ILLDIEGTTTPIAFVKDILFPYIEENVKEYLQTHWEEEECQQDVSLLRKQAEEDAHLDGA 69
Query: 57 ------------------EEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC-----KVKAL 93
+ V K + ++ K +
Sbjct: 70 VPIPAASGNGVDDLQQMIQAVVDNVCWQMSLDRKTTALKQLQGHMWRAAFTAGRMKAEFF 129
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDI 153
++ G+ + + S+ + + + V D K +
Sbjct: 130 ADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDTKIGHKVESES 189
Query: 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSL 211
+ + A + ++ L + D A + A + V V P T +I S
Sbjct: 190 YRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSF 249
Query: 212 LDL 214
+L
Sbjct: 250 SEL 252
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} Length = 218 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Score = 82.2 bits (201), Expect = 2e-19
Identities = 41/209 (19%), Positives = 90/209 (43%), Gaps = 3/209 (1%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGRE--KHKIVGKTPLEEAAIIVEDYGLP 69
I D+DG L++++ ++ + G + R + + +
Sbjct: 6 AIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNG 65
Query: 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
++ E V V + + + + L R L + +++ + K+
Sbjct: 66 PSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMF 125
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
+SF + ++++ KP P ++L+ A +L ++P + + +EDSV G++A KAA M +
Sbjct: 126 DLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSI 185
Query: 190 AVPSLPKQTH-RYTAADEVINSLLDLRPE 217
VP+ Q R+ A+ ++SL +L +
Sbjct: 186 VVPAPEAQNDPRFVLANVKLSSLTELTAK 214
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Score = 80.2 bits (196), Expect = 1e-18
Identities = 28/203 (13%), Positives = 60/203 (29%), Gaps = 24/203 (11%)
Query: 12 VILDLDGTLLNTD------------GMFSEVLKTFLVKYGKE------WDGREKHKIVGK 53
DLDG L + + L E G+
Sbjct: 3 AAFDLDGVLALPSIAGAFRRSEEALALPRDFLLGAYQTEFPEGPTEQLMKGKITFSQWVP 62
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALA 113
E + G ++ +++++S + L G +
Sbjct: 63 LMDESYRKSSKACGANLPENFSISQIFSQAMAAR---SINRPMLQAAIALKKKGFTTCIV 119
Query: 114 SNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170
+N+ + + S ++ F ++ S +V KP P I+ L +P+ +
Sbjct: 120 TNNWLDDGDKRDSLAQMMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLKAKPNEVVF 179
Query: 171 IEDSVIGVVAGKAAGMEVVAVPS 193
++D + + GM + V +
Sbjct: 180 LDDFGSNLKPARDMGMVTILVHN 202
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} Length = 222 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Score = 79.9 bits (195), Expect = 2e-18
Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 6/209 (2%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D DG L++++ + ++V L + G E + + + VE
Sbjct: 5 IIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPL 64
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
+++ + L + + + + S+SHR + +
Sbjct: 65 SASLLDKSEKLLDMRLERDVKIIDGVKFALSRLTTPRCICSNSSSHRLDMMLTKVGLKPY 124
Query: 132 NESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191
KP PDIFL A + + P +V+EDSV G+ +AAGM V+
Sbjct: 125 FAPHIYSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184
Query: 192 PS------LPKQTHRYTAADEVINSLLDL 214
A+ VI+ + DL
Sbjct: 185 TGASHTYPSHADRLTDAGAETVISRMQDL 213
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Length = 221 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Score = 77.2 bits (188), Expect = 2e-17
Identities = 48/214 (22%), Positives = 79/214 (36%), Gaps = 14/214 (6%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
V+ DLDG + +T K + G R+ ++ + E++ + D
Sbjct: 4 AVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKK 63
Query: 71 AKHEFV-------NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
E N+ Y + PG +L+K L + + +ALAS S
Sbjct: 64 VSAEEFKELAKRKNDNYVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN---GP 120
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ + F I EV KP+PDIF+ AA + + PS S+ +EDS G+ A K
Sbjct: 121 FLLERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKD 180
Query: 184 AGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPE 217
+G + V ++ E
Sbjct: 181 SGALPIGVGR----PEDLGDDIVIVPDTSHYTLE 210
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.4 bits (186), Expect = 3e-17
Identities = 34/206 (16%), Positives = 58/206 (28%), Gaps = 24/206 (11%)
Query: 9 MSCVILDLDGTLLNTD------------GMFSEVLKTFLVKYGKEWD------GREKHKI 50
+ + DLDG L + +L K G E G
Sbjct: 2 LRAAVFDLDGVLALPAVFGVLGRTEEALALPRGLLNDAFQKGGPEGATTRLMKGEITLSQ 61
Query: 51 VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPM 110
E E + K+ + E+ F + K + L G
Sbjct: 62 WIPLMEENCRKCSETAKVCLPKNFSIKEI---FDKAISARKINRPMLQAALMLRKKGFTT 118
Query: 111 ALASNSHRATIESKISY---QHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167
A+ +N+ + F ++ S +V KP P I+ L PS
Sbjct: 119 AILTNTWLDDRAERDGLAQLMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLKASPSE 178
Query: 168 SLVIEDSVIGVVAGKAAGMEVVAVPS 193
+ ++D + + GM + V
Sbjct: 179 VVFLDDIGANLKPARDLGMVTILVQD 204
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Score = 74.4 bits (181), Expect = 3e-16
Identities = 33/199 (16%), Positives = 63/199 (31%), Gaps = 16/199 (8%)
Query: 9 MSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG 67
+ VI GT ++ EV K G E K +G ++ + E
Sbjct: 2 IEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPR 61
Query: 68 LPCAKHEFVNEVYSMFSDHLC--------------KVKALPGANRLIKHLSCHGVPMALA 113
+ + ++ + + G +I L G+ +
Sbjct: 62 IASEWNRVFRQLPTEADIQEMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGST 121
Query: 114 SNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN-MEPSSSLVIE 172
+ R ++ +V D+V G+P P + + A L + + +
Sbjct: 122 TGYTREMMDIVAKEAALQGYKPDFLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVG 181
Query: 173 DSVIGVVAGKAAGMEVVAV 191
D+V + G+ AGM V V
Sbjct: 182 DTVSDMKEGRNAGMWTVGV 200
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 72.8 bits (177), Expect = 4e-16
Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 10/183 (5%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
I DL GTLL+ + L YG D ++ + +
Sbjct: 5 DYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPF------AIETFAP 58
Query: 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
F+ + + L G + L++ +S G L S+ + +E
Sbjct: 59 NLENFLEKYKENEARELEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLEILEKTSIA 118
Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ V S R P+ L ++ + LVI D I + AG+AAG++
Sbjct: 119 AYFTEVVTSSSGFKRKPN--PESMLYLREKYQISS--GLVIGDRPIDIEAGQAAGLDTHL 174
Query: 191 VPS 193
S
Sbjct: 175 FTS 177
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 71.0 bits (172), Expect = 3e-15
Identities = 23/223 (10%), Positives = 57/223 (25%), Gaps = 19/223 (8%)
Query: 10 SCVILDLDGTLLNT----DGMFS---EVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA-- 60
S +LD++GT+ + +F + + + ++ E+
Sbjct: 4 STYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAH 63
Query: 61 ---IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSH 117
++ +D P K + K A IK + + + +
Sbjct: 64 ILELVAKDVKDPILKQLQGYVWAHGYESGQIKAPVYADAIDFIKRKKRVFIYSSGSVKAQ 123
Query: 118 RATIE------SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
+ + N + K + + + + S L +
Sbjct: 124 KLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-TSGKKTETQSYANILRDIGAKASEVLFL 182
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D+ + + A G+ +V + L
Sbjct: 183 SDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} Length = 220 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Score = 70.7 bits (171), Expect = 4e-15
Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 11/213 (5%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKY---GKEWDGREKHKIVGKT------PLEEAAII 62
+ DL GTL + + + F + W ++ ++ ++A
Sbjct: 5 IAFDLYGTLFDVHSVVGRCDEAFPGRGREISALWRQKQLEYTWLRSLMNRYVNFQQATED 64
Query: 63 VEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE 122
+ + S D ++ ++ L G+ +A+ SN +I+
Sbjct: 65 ALRFTCRHLGLDLDARTRSTLCDAYLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSID 124
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ G + F ++ D V+ KP ++ A + L ++ S+ L + + +
Sbjct: 125 -AVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGAR 183
Query: 183 AAGMEVVAVPSLPKQTHRY-TAADEVINSLLDL 214
G + D + SL +
Sbjct: 184 YFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAV 216
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} Length = 204 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 68.7 bits (166), Expect = 2e-14
Identities = 30/207 (14%), Positives = 73/207 (35%), Gaps = 9/207 (4%)
Query: 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP 69
+ I DLDGTLL++ ++ ++ +D + + + K +++ + V +
Sbjct: 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNL 61
Query: 70 CAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH 129
+ ++ +V +PGA ++ G+ + ++
Sbjct: 62 DVEV-LNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFTILKDLGV 120
Query: 130 GWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVV 189
+ + S VR KPSP+ + + ++ I D + V + +G++ +
Sbjct: 121 ESYFTEILTSQSGFVR--KPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSI 178
Query: 190 AVPSLPKQTHRYTAADEVINSLLDLRP 216
+ I +L D+
Sbjct: 179 NF------LESTYEGNHRIQALADISR 199
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} Length = 207 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Score = 68.4 bits (165), Expect = 2e-14
Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 5/204 (2%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
++ D+DGTL N+ ++ V++ L YGK + + K + E
Sbjct: 5 ALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAA---EQAMTELGIAAS 61
Query: 71 AKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHG 130
F + + + H +++ PG L + L S R +
Sbjct: 62 EFDHFQAQYEDVMASHYDQIELYPGITSLFEQLPSELRLGI--VTSQRRNELESGMRSYP 119
Query: 131 WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVA 190
+ +V + +D+ KP P L A +++N+ P ++L I DSV +AA ++
Sbjct: 120 FMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGL 179
Query: 191 VPSLPKQTHRYTAADEVINSLLDL 214
+ LD+
Sbjct: 180 AVWGMDPNADHQKVAHRFQKPLDI 203
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Score = 68.7 bits (166), Expect = 3e-14
Identities = 40/225 (17%), Positives = 73/225 (32%), Gaps = 15/225 (6%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYG---- 67
V+ D GTL + + + + G+ + K + + L D+
Sbjct: 5 VVFDAYGTLFDVQSVADATERAYP-GRGEYITQVWRQKQLEYSWLRALMGRYADFWSVTR 63
Query: 68 --LPCAKHEFVNEVYSMFSDHL--CKVKALPGANRLIKHLSCHGVPMALASNSHRATIES 123
L E F + + P + + A+ SN ++
Sbjct: 64 EALAYTLGTLGLEPDESFLADMAQAYNRLTPYPDAAQCLAELAPLKRAILSNGAPDMLQ- 122
Query: 124 KISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKA 183
+ G +SF ++ D R KP PD + + L + P+ L + + V K
Sbjct: 123 ALVANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKN 182
Query: 184 AGMEVVAV-----PSLPKQTHRYTAADEVINSLLDLRPEKWGLPP 223
G V V +L ++ T A + L +R E + P
Sbjct: 183 FGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAP 227
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 69.8 bits (170), Expect = 3e-14
Identities = 28/205 (13%), Positives = 59/205 (28%), Gaps = 34/205 (16%)
Query: 43 DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKH 102
+ + + +E + + Y K + + ++ + L+
Sbjct: 168 SLKGALWTLAQEVYQEWYLGSKLYE-DVEKKIARTTFKTGYIYQEIILRPVDEVKVLLND 226
Query: 103 LSCHGVPMALASNSHRATIESKISYQHGWNESF--SVIVGSDEVRTG-----------KP 149
L G + +A+ G F I + +V KP
Sbjct: 227 LKGAGFELGIATGRPYTETV-VPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKP 285
Query: 150 SPDIFLEAAKRLNME--------------PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195
+P ++ A N + ++ DS+ +++ + G + +
Sbjct: 286 NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGL 345
Query: 196 KQTH-----RYTAADEVINSLLDLR 215
K AD VIN L +LR
Sbjct: 346 KGKDAAGELEAHHADYVINHLGELR 370
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} Length = 228 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Score = 66.3 bits (160), Expect = 2e-13
Identities = 37/221 (16%), Positives = 69/221 (31%), Gaps = 15/221 (6%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
+ L V+ D+DGTLL + M VL L++ H GK ++ +
Sbjct: 2 RTL---VLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSHDFSGKMDGAIIYEVLSN 58
Query: 66 YGLPCAK-HEFVNEVYSMFSDHL------CKVKALPGANRLIKHLSCHGVPMALASNSHR 118
GL A+ + ++ + + L G L+ LS + +
Sbjct: 59 VGLERAEIADKFDKAKETYIALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNF 118
Query: 119 ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA---AKRLNMEPSSSLVIEDSV 175
G + F +D+ P I LE N PS ++I D+
Sbjct: 119 EASGRHKLKLPGIDHYFPFGAFADDALDRNELPHIALERARRMTGANYSPSQIVIIGDTE 178
Query: 176 IGVVAGKAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
+ + +AV + + + + +
Sbjct: 179 HDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAET 219
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 164 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 64.5 bits (156), Expect = 2e-13
Identities = 26/217 (11%), Positives = 54/217 (24%), Gaps = 53/217 (24%)
Query: 5 LKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVE 64
+ +L + DLD TL W V+
Sbjct: 1 MTRLPKLAVFDLDYTL---------------------WPF-----------------WVD 22
Query: 65 DYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESK 124
+ P V + ++ P ++ L GVP+A AS + ++
Sbjct: 23 THVDPPFHKSSDGTVRDRRGQN---IQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQ 79
Query: 125 ISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAA 184
+ + F F + + S + +D ++
Sbjct: 80 LLELFDLGKYFIQREIYP-----GSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRL 134
Query: 185 GMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGL 221
G+ + + + + L + GL
Sbjct: 135 GVTCIHIR------DGMS-LQTLTQGLETFAKAQAGL 164
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} Length = 224 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Score = 65.7 bits (158), Expect = 2e-13
Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 12/215 (5%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPC 70
+ DLDGTL+N+ + + + L + + D+
Sbjct: 6 LIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQ 65
Query: 71 AKHEFVNEVYSMFS---------DHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATI 121
A+ E + + F + + P ++ L G +A+ +N +
Sbjct: 66 AEKELTEDEFKYFKRQFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHV 125
Query: 122 ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAG 181
+ + G + FS ++G + KP P F + + P L + DS + A
Sbjct: 126 QPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAA 184
Query: 182 KAAGMEVVAVPS--LPKQTHRYTAADEVINSLLDL 214
+AG VV + + D + + D+
Sbjct: 185 HSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADI 219
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 62.7 bits (151), Expect = 2e-12
Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 26/231 (11%)
Query: 12 VILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCA 71
+I D DGT+ D ++KTF EW + + ++E +
Sbjct: 7 IICDFDGTITMND-NIINIMKTFA---PPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSL 62
Query: 72 KHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGW 131
K E + V K G + ++ H +P + S +
Sbjct: 63 KEEITSFVLE-------DAKIREGFREFVAFINEHEIPFYVISGGMD-FFVYPLLEGIVE 114
Query: 132 NESF---SVIVGSDEVRT----------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178
+ +D + L+ ++I DSV V
Sbjct: 115 KDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDV 174
Query: 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIE 229
A K + + A L + ++R E + Q+W++
Sbjct: 175 EAAKLSDL-CFARDYLLNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQ 224
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Score = 55.6 bits (132), Expect = 6e-10
Identities = 25/208 (12%), Positives = 67/208 (32%), Gaps = 8/208 (3%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGL 68
++ + DLDGTL+++ + G + + PLE +
Sbjct: 4 ITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQ 63
Query: 69 PCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQ 128
+ Y + ++ ++I L L + + T ++ +
Sbjct: 64 ISEAVQIYRSYYKAKGIYEAQLF-----PQIIDLLEELSSSYPLYITTTKDTSTAQDMAK 118
Query: 129 HGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV 188
+ F D+ +A + + P +++I D+ ++ + G++
Sbjct: 119 NLEIHHF-FDGIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQK 177
Query: 189 VAVPS--LPKQTHRYTAADEVINSLLDL 214
+A+ + D + + L++
Sbjct: 178 LAITWGFGEQADLLNYQPDYIAHKPLEV 205
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} Length = 247 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Score = 55.2 bits (131), Expect = 1e-09
Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 26/228 (11%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAI--------- 61
V DLD TL++T G + + ++ +E+ +I+ + +
Sbjct: 8 AVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTC 67
Query: 62 -----------IVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVP 109
+++ + E Y ++ + + ++ L V
Sbjct: 68 ITDVRTSHWEEAIQETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELRKE-VR 126
Query: 110 MALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169
+ L +N R T KI F IV E + KP+P IF L ++P +
Sbjct: 127 LLLLTNGDRQTQREKIEACA-CQSYFDAIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCV 185
Query: 170 VIEDSVI-GVVAGKAAGMEVVAV--PSLPKQTHRYTAADEVINSLLDL 214
++ D++ + G AG++ S +++S+L+L
Sbjct: 186 MVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLEL 233
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Score = 53.7 bits (127), Expect = 3e-09
Identities = 26/222 (11%), Positives = 64/222 (28%), Gaps = 17/222 (7%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK---------------EWDGREKHKIVGK 53
+ V D GTLL+ +G LK G + +
Sbjct: 2 IRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPY 61
Query: 54 TPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCK-VKALPGANRLIKHLSCHGVPMAL 112
P+ + V ++ + + + + P ++K L + +
Sbjct: 62 RPIRDIEEEVMRKLAEKYGFKYPENFWEIHLRMHQRYGELYPEVVEVLKSLKGK-YHVGM 120
Query: 113 ASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIE 172
++S + + + + S+ + L K + V +
Sbjct: 121 ITDSDTEYLMAHLDALGIKDLFDSITTSEEAGFFKPHPRIFELALKKAGVKGEEAVYVGD 180
Query: 173 DSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+ V K GM + + ++ + D +++ L ++
Sbjct: 181 NPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREV 222
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 42.5 bits (98), Expect = 2e-05
Identities = 38/216 (17%), Positives = 67/216 (31%), Gaps = 31/216 (14%)
Query: 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVED 65
KKL ++ D D TL+N +E + + G E + ++ K + L + +
Sbjct: 4 KKL---ILFDFDSTLVN-----NETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKR 55
Query: 66 YGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI 125
L E GA IK L G +A+ S +
Sbjct: 56 VSLLKDLPIEKVEKAIKRITPTE------GAEETIKELKNRGYVVAVVSGGFDIAVNKIK 109
Query: 126 SYQHGWNESFSVIVGSDEVRT---------GKPSPDIFLEAAKRLNMEPSSSLVIEDSVI 176
+ ++ D T +I + AK + ++ + D
Sbjct: 110 EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAN 169
Query: 177 GVVAGKAAGMEVV--AVPSLPKQTHRYTAADEVINS 210
+ K AG+++ A P L + AD I
Sbjct: 170 DISMFKKAGLKIAFCAKPILKE------KADICIEK 199
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} Length = 161 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Score = 41.4 bits (96), Expect = 3e-05
Identities = 17/129 (13%), Positives = 32/129 (24%), Gaps = 17/129 (13%)
Query: 80 YSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRA-----------------TIE 122
D K+ PG + L G + + +N
Sbjct: 19 SDFQVDRFDKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQI 78
Query: 123 SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGK 182
+ +DE KP + M+ ++S VI D + +
Sbjct: 79 FTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAE 138
Query: 183 AAGMEVVAV 191
G+ +
Sbjct: 139 NMGINGLRY 147
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (88), Expect = 4e-04
Identities = 37/225 (16%), Positives = 63/225 (28%), Gaps = 25/225 (11%)
Query: 4 PLKKLMS---CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAA 60
L+KL V D+D T++ E + G E E + + A
Sbjct: 2 ELRKLFYSADAVCFDVDSTVIR-----EEGIDELAKICGVEDAVSEMTRRAMGGAVPFKA 56
Query: 61 IIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRAT 120
+ E L E V + + HL PG L+ L V + L S R+
Sbjct: 57 ALTERLALIQPSREQVQRLIAEQPPHLT-----PGIRELVSRLQERNVQVFLISGGFRSI 111
Query: 121 I----------ESKISYQHGWNESFSVIVGSDEV-RTGKPSPDIFLEAAKRLNMEPSSSL 169
+ + + G DE T + + + +
Sbjct: 112 VEHVASKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKII 171
Query: 170 VIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
+I D + A A + + A I ++L
Sbjct: 172 MIGDGATDMEACPPADA-FIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Score = 37.4 bits (85), Expect = 0.001
Identities = 26/248 (10%), Positives = 59/248 (23%), Gaps = 44/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
++DLDGT+ + + +
Sbjct: 4 GYLIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 63
Query: 48 HKIVGKTPLEEAAIIVEDYG----------------LPCAKHEFVNEVYSMFSDHLCKVK 91
+ T +++ + A E+ L
Sbjct: 64 PASLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDYVVVGLDTEL 123
Query: 92 ALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSP 151
+ + + + + + T + + V GKP
Sbjct: 124 SYEKVVLATLAIQKGALFIGTNPDKNIPTERGLLPGAGSVVTFVETATQTKPVYIGKPKA 183
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS---LPKQTHRYTA-ADE 206
I A L +E +++ D+ + +G G++ + V S
Sbjct: 184 IIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTY 243
Query: 207 VINSLLDL 214
V++SL +
Sbjct: 244 VVDSLDEW 251
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Score = 36.6 bits (83), Expect = 0.002
Identities = 33/248 (13%), Positives = 68/248 (27%), Gaps = 45/248 (18%)
Query: 9 MSCVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGR 45
+ VI D+DG L++ + + L
Sbjct: 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62
Query: 46 EKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLCKVKALP-----GANRLI 100
+ + + A + G ++ ++ P G R
Sbjct: 63 VPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVGETRSY 122
Query: 101 KHLSCHGVPMALASNSHRATIESKISYQ------HGWNESFSVIVGSDEVRTGKPSPDIF 154
H +A+ + + I G GKPSP I
Sbjct: 123 NWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALCAGIEKISGRKPFYVGKPSPWII 182
Query: 155 LEAAKRLNMEPSSSLVIEDSVIG-VVAGKAAGMEVVAVPS-------LPKQTHRYTAADE 206
A ++ ++++ D++ ++AG AG+E + V S + R
Sbjct: 183 RAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFR---PSW 239
Query: 207 VINSLLDL 214
+ S+ ++
Sbjct: 240 IYPSVAEI 247
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} Length = 209 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Score = 36.1 bits (82), Expect = 0.002
Identities = 27/163 (16%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 61 IIVEDYGLPCAKHEFV-----NEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASN 115
I D P E V + + V + + + + A+
Sbjct: 33 TINVDTDYPSDPAEIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGR 92
Query: 116 SHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVI 171
+ + ++E+ + + KP+P + +EA KRL ++ SL++
Sbjct: 93 VLELLREEGVFVDMVLACAYHEAGVGPLAIPDHPMRKPNPGMLVEAGKRLALDLQRSLIV 152
Query: 172 EDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214
D + + AGK AG+ + I L D
Sbjct: 153 GDKLADMQAGKRAGLAQGWLVD----GEAAVQPGFAIRPLRDS 191
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} Length = 253 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Score = 36.2 bits (82), Expect = 0.003
Identities = 29/248 (11%), Positives = 61/248 (24%), Gaps = 44/248 (17%)
Query: 11 CVILDLDGTLLNTDGMFSEVLKTF-----------------------LVKYGKEWDGREK 47
++DLDGT+ + + +
Sbjct: 4 GYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEMLATSFNIKT 63
Query: 48 HKIVGKTPLEEAA---------IIVEDYGLPCAKHEFVNEVYSMFSDH-----LCKVKAL 93
T G K Y S++ + L
Sbjct: 64 PLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAGYREDSENPAYVVVGLDTNL 123
Query: 94 PGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--GWNESFSVIVGSDEVRTGKPSP 151
+ L+ + + +N + + GKP
Sbjct: 124 TYEKLTLATLAIQKGAVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEA 183
Query: 152 DIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAA----DE 206
I +A RL ++ ++++ D+ + AG + + V + + A D
Sbjct: 184 VIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDF 243
Query: 207 VINSLLDL 214
V++SL +
Sbjct: 244 VLSSLAEW 251
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 287 | |||
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 100.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 100.0 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 99.97 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 99.97 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 99.97 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 99.97 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 99.97 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 99.96 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 99.96 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 99.96 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 99.96 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 99.95 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 99.95 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 99.94 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 99.94 | |
| d2g80a1 | 225 | Protein UTR4 {Baker's yeast (Saccharomyces cerevis | 99.9 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 99.88 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 99.88 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 99.88 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 99.86 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 99.85 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 99.82 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 99.81 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 99.8 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 99.79 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 99.79 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 99.78 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 99.75 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 99.74 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 99.72 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.67 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 99.6 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.54 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.52 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.44 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.41 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.41 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.3 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.22 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.18 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 99.18 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 99.12 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.11 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 99.08 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.07 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 98.95 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.91 | |
| d2bdea1 | 458 | Cytosolic IMP-GMP specific 5'-nucleotidase {Legion | 98.82 | |
| d1q92a_ | 195 | 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo | 98.77 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.73 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 98.7 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.59 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.48 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 98.44 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 98.36 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.83 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.6 | |
| d1ta0a_ | 181 | Carboxy-terminal domain RNA polymerase II polypept | 96.76 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 94.26 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 90.49 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 85.87 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 85.36 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 81.27 | |
| d1nb9a_ | 147 | Riboflavin kinase {Human (Homo sapiens) [TaxId: 96 | 81.11 |
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.5e-32 Score=221.16 Aligned_cols=208 Identities=23% Similarity=0.378 Sum_probs=172.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHH-HHHHHhCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGR-EKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFS 84 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 84 (287)
++|++++||+||||+|+...+..+++++++++|.+++.. ......+................. .....+.....+.+.
T Consensus 1 ~~i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (218)
T d1te2a_ 1 RQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAI 80 (218)
T ss_dssp CCCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHH
T ss_pred CcceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHH
Confidence 368999999999999999999999999999999887654 334556666666655555554432 234445555544444
Q ss_pred hhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 85 DHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 85 ~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
+.. ...+++||+.++|+.|+++|++++++||+++..++..+ +++|+.++|+.++++++.+..||+|+.|..+++++|+
T Consensus 81 ~~~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l-~~~~l~~~F~~i~~~~~~~~~Kp~~~~~~~~~~~l~~ 159 (218)
T d1te2a_ 81 SLVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVL-TMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGV 159 (218)
T ss_dssp HHHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEECTTSSCCTTSTHHHHHHHHHHTS
T ss_pred HhhhccccccchHHHHHHHhhhcccccccccccccccccccc-ccccccccccccccccccccchhhHHHHHHHHHHcCC
Confidence 433 35678899999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc-cccCCcEEeCCccCcC
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-RYTAADEVINSLLDLR 215 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~-~~~~a~~v~~~l~el~ 215 (287)
+|++|++|||+.+|+.+|+++|+.+++++.+..... ....++++++++.|+.
T Consensus 160 ~~~~~l~igD~~~di~aA~~~G~~~i~v~~~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 160 DPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEECCCTTTTTCGGGGGSSEECSCGGGCC
T ss_pred CchhcEEEeeCHHHHHHHHHcCCEEEEECCCCCccchhhcCCCEEECChhhCC
Confidence 999999999999999999999999999977544333 3567899999999874
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=100.00 E-value=2.7e-33 Score=223.87 Aligned_cols=204 Identities=20% Similarity=0.344 Sum_probs=176.6
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCC-CCHHHHHHHHHHHHHh
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLP-CAKHEFVNEVYSMFSD 85 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 85 (287)
|++|+|+||+||||+|+...+..+++.+++++|.+..........+........ ..+.. ...+.+...+.+.+.+
T Consensus 1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 76 (207)
T d2hdoa1 1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMT----ELGIAASEFDHFQAQYEDVMAS 76 (207)
T ss_dssp CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHH----HTTCCGGGHHHHHHHHHHHHTT
T ss_pred CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhhh----ccccchhhHHHHHHHhhhhhcc
Confidence 358999999999999999999999999999999999888888888777654433 33332 2345666666666666
Q ss_pred hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
.....+++||+.++|+.+++ +++++++||++...++..+ +++|+..+|+.++++++.+..||+|+.+..+++++|++|
T Consensus 77 ~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~~~~~~ 154 (207)
T d2hdoa1 77 HYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGM-RSYPFMMRMAVTISADDTPKRKPDPLPLLTALEKVNVAP 154 (207)
T ss_dssp CGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHH-TTSGGGGGEEEEECGGGSSCCTTSSHHHHHHHHHTTCCG
T ss_pred cccccccccchhhhhhhhcc-ccccccccccccccccccc-ccccccccccccccccccccchhhhhhhcccccceeeec
Confidence 66788999999999999975 6899999999999999999 999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
++|+|||||.+|+.+|+++|+.++++..+.........+++++.++.|+.+
T Consensus 155 ~~~l~VgDs~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~i~~l~dll~ 205 (207)
T d2hdoa1 155 QNALFIGDSVSDEQTAQAANVDFGLAVWGMDPNADHQKVAHRFQKPLDILE 205 (207)
T ss_dssp GGEEEEESSHHHHHHHHHHTCEEEEEGGGCCTTGGGSCCSEEESSGGGGGG
T ss_pred cceeEecCCHHHHHHHHHcCCeEEEEecCCCChhHhhhcCcEeCCHHHHHh
Confidence 999999999999999999999999998877666666778999999988764
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=99.97 E-value=9.9e-31 Score=210.88 Aligned_cols=212 Identities=17% Similarity=0.210 Sum_probs=168.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC-HHHHHHHhCCCHHHHHHHHH----HHhCCCCCHHHHHH---
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD-GREKHKIVGKTPLEEAAIIV----EDYGLPCAKHEFVN--- 77 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--- 77 (287)
|+++|+|+||+||||+|+...+..+++++++++|.+.. .+......+........... ..............
T Consensus 1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (224)
T d2hsza1 1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR 80 (224)
T ss_dssp CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHH
Confidence 56799999999999999999999999999999997644 45556666665544333222 22222222222211
Q ss_pred HHHHHHHh-hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHH
Q 023109 78 EVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLE 156 (287)
Q Consensus 78 ~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~ 156 (287)
.......+ ......++||+.++|+.|++.|++++++||++...++.++ +++|+..+|+.++++++.+..||+|+.+..
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l-~~~gl~~~f~~~~~~~~~~~~kp~p~~~~~ 159 (224)
T d2hsza1 81 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPIL-TAFGIDHLFSEMLGGQSLPEIKPHPAPFYY 159 (224)
T ss_dssp HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTCGGGCSEEECTTTSSSCTTSSHHHHH
T ss_pred HHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHH-HhcCchhhccccccccccccccccchhhHH
Confidence 11111211 2246778999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc--cccCCcEEeCCccCcCccc
Q 023109 157 AAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 157 ~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~--~~~~a~~v~~~l~el~~~~ 218 (287)
++++++++|++|++|||+.+|+.+|+++|+.++++..+..... ....++++++++.++.+.+
T Consensus 160 ~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~g~~~~~~l~~~~~d~~v~~l~dL~~ii 223 (224)
T d2hsza1 160 LCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTYGYNYNIPIAQSKPDWIFDDFADILKIT 223 (224)
T ss_dssp HHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSCSTTCCGGGGCCSEEESSGGGGGGGT
T ss_pred HHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeCCCCCcchhhhcCCCEEECCHHHHHHhh
Confidence 9999999999999999999999999999999999998655433 2557899999999997653
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=1.7e-30 Score=206.88 Aligned_cols=197 Identities=17% Similarity=0.247 Sum_probs=161.9
Q ss_pred cEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-HhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhhc
Q 023109 10 SCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHLC 88 (287)
Q Consensus 10 k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (287)
++++||+||||+|+...+..+++++++++|.+........ ..+......+..+....+.. .+.+.......+.+...
T Consensus 2 ~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 79 (204)
T d2go7a1 2 TAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLD--VEVLNQVRAQSLAEKNA 79 (204)
T ss_dssp CEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHHHHTCC--HHHHHHHHHHHHTTCGG
T ss_pred EEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhcccccccccccccchhhhh--HHHHHHHHHHHHHhhcc
Confidence 6899999999999999888999999999999887765544 44566666777776666542 34444444444444455
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcE
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSS 168 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~ 168 (287)
...++||+.++|+.|+++|++++++||++.. +..++ +++|+..+|+.++++++....||+|+.|..+++.++++|++|
T Consensus 80 ~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l-~~~gl~~~f~~i~~s~~~~~~Kp~~~~~~~~~~~~~~~p~~~ 157 (204)
T d2go7a1 80 QVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTIL-KDLGVESYFTEILTSQSGFVRKPSPEAATYLLDKYQLNSDNT 157 (204)
T ss_dssp GCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHH-HHHTCGGGEEEEECGGGCCCCTTSSHHHHHHHHHHTCCGGGE
T ss_pred cCcccchHHhhhhcccccccchhhhcccchh-hhhhh-hhcccccccccccccccccccchhHHHHHHHHHHhCCCCceE
Confidence 7888999999999999999999999998764 45678 889999999999999999999999999999999999999999
Q ss_pred EEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 169 LVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 169 l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
+||||+.+|+.+|+++|++++++..+. ..+++.+.++.++.+
T Consensus 158 l~VgD~~~Di~~A~~~G~~~i~v~~~~------~~~~~~~~~~~dl~~ 199 (204)
T d2go7a1 158 YYIGDRTLDVEFAQNSGIQSINFLEST------YEGNHRIQALADISR 199 (204)
T ss_dssp EEEESSHHHHHHHHHHTCEEEESSCCS------CTTEEECSSTTHHHH
T ss_pred EEEeCCHHHHHHHHHcCCeEEEEcCCC------CCcCeecCCHHHHHH
Confidence 999999999999999999999998753 235666777666543
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=99.97 E-value=1.2e-30 Score=215.17 Aligned_cols=210 Identities=18% Similarity=0.229 Sum_probs=165.7
Q ss_pred CccEEEEecCCcccccHHH-HHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHH----------HHhCCCCCH---H
Q 023109 8 LMSCVILDLDGTLLNTDGM-FSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIV----------EDYGLPCAK---H 73 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~ 73 (287)
+||+|+||+||||+|+... ...++.++++++|...+.+.++...|....+....+. ..++..... .
T Consensus 1 kIkaviFD~dGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (257)
T d1swva_ 1 KIEAVIFAWAGTTVDYGCFAPLEVFMEIFHKRGVAITAEEARKPMGLLKIDHVRALTEMPRIASEWNRVFRQLPTEADIQ 80 (257)
T ss_dssp CCCEEEECSBTTTBSTTCCTTHHHHHHHHHTTTCCCCHHHHHTTTTSCHHHHHHHHHHSHHHHHHHHHHHSSCCCHHHHH
T ss_pred CcEEEEEcCCCCeEeCcchHHHHHHHHHHHHcCCCCCHHHHHHHhCCcHHHHHHHHhhhhhhhHHHHHHhcccCCHHHHH
Confidence 5899999999999998543 3567888899999999888887777776555443322 222322222 2
Q ss_pred HHHHHHHHHHHhhh-ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccc-ceeeccCCcCCCCCCH
Q 023109 74 EFVNEVYSMFSDHL-CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESF-SVIVGSDEVRTGKPSP 151 (287)
Q Consensus 74 ~~~~~~~~~~~~~~-~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~f-d~i~~~~~~~~~kp~~ 151 (287)
.+...+.+.+.+.. ....++||+.++|+.|+++|++++++||.+...++..+ +..|+..+| |.++++++.+..||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l-~~~~l~~~f~d~~~~~d~~~~~KP~p 159 (257)
T d1swva_ 81 EMYEEFEEILFAILPRYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVA-KEAALQGYKPDFLVTPDDVPAGRPYP 159 (257)
T ss_dssp HHHHHHHHHHHHHGGGGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHH-HHHHHTTCCCSCCBCGGGSSCCTTSS
T ss_pred HHHHHHHHHHHHHhhccCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHH-HHHhhcccccccccccccccccccCh
Confidence 23334444444443 35678999999999999999999999999999999999 888998877 8889999999999999
Q ss_pred HHHHHHHHHcCCC-CCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc-------------------------cccCCc
Q 023109 152 DIFLEAAKRLNME-PSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH-------------------------RYTAAD 205 (287)
Q Consensus 152 ~~~~~~~~~l~~~-~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~-------------------------~~~~a~ 205 (287)
+.|.++++++|+. +++|+||||+.+|+.+|+++|+.++++.+|..... ....||
T Consensus 160 ~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gad 239 (257)
T d1swva_ 160 WMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAH 239 (257)
T ss_dssp HHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHHHHHhCCCC
Confidence 9999999999995 58999999999999999999999999988753210 123589
Q ss_pred EEeCCccCcCccc
Q 023109 206 EVINSLLDLRPEK 218 (287)
Q Consensus 206 ~v~~~l~el~~~~ 218 (287)
++++++.|+...+
T Consensus 240 ~vi~~l~eL~~ii 252 (257)
T d1swva_ 240 FTIETMQELESVM 252 (257)
T ss_dssp EEESSGGGHHHHH
T ss_pred EEECCHHHHHHHH
Confidence 9999999987654
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.97 E-value=4.6e-30 Score=205.20 Aligned_cols=204 Identities=16% Similarity=0.236 Sum_probs=163.7
Q ss_pred cCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCC-CHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH
Q 023109 6 KKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEW-DGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFS 84 (287)
Q Consensus 6 ~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
|.+||+|+||+||||+|+...+..+++++++++|.+. +.+.++...+......+...+.. .........+...+.
T Consensus 1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (210)
T d2ah5a1 1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSK----DQISEAVQIYRSYYK 76 (210)
T ss_dssp CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTTSCG----GGHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhccccccc----hhhHHHHHHHHHHHH
Confidence 5679999999999999999999999999999999864 45666677777766554333221 123333333333333
Q ss_pred hh-hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 85 DH-LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 85 ~~-~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
.. ....++++++.++++.++.. .+++++|+++...++..+ +++|+..+|+.++++++. .||+|+.+..+++.+|+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l-~~~gl~~~fd~v~~~~~~--~~~~p~~~~~~~~~~~~ 152 (210)
T d2ah5a1 77 AKGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMA-KNLEIHHFFDGIYGSSPE--APHKADVIHQALQTHQL 152 (210)
T ss_dssp HTGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHH-HHTTCGGGCSEEEEECSS--CCSHHHHHHHHHHHTTC
T ss_pred hhhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHH-Hhhccccccccccccccc--ccccccccchhhhhhhc
Confidence 33 34678899999999999877 589999999999999999 999999999999988775 67888999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCcc
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPE 217 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~ 217 (287)
+|+++++|||+.+|+.+|+++|++++++.+|....+. ...|+++++++.|+...
T Consensus 153 ~~~~~v~VGDs~~Di~aa~~aGi~~i~v~~g~~~~~~l~~~~pd~vi~~l~el~~~ 208 (210)
T d2ah5a1 153 APEQAIIIGDTKFDMLGARETGIQKLAITWGFGEQADLLNYQPDYIAHKPLEVLAY 208 (210)
T ss_dssp CGGGEEEEESSHHHHHHHHHHTCEEEEESSSSSCHHHHHTTCCSEEESSTTHHHHH
T ss_pred ccccceeecCCHHHHHHHHHcCCeEEEEcCCCCCHHHHHhCCCCEEECCHHHHHHH
Confidence 9999999999999999999999999999886544332 45689999999987653
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.97 E-value=3.6e-29 Score=201.64 Aligned_cols=205 Identities=24% Similarity=0.375 Sum_probs=168.8
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-HHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhh
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDHL 87 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (287)
+|+|+||+||||+||...+..+++++++++|.+++.+.+ ....+.+.......+....+.+.... +.......+.+..
T Consensus 2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 80 (222)
T d2fdra1 2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASIPLSAS-LLDKSEKLLDMRL 80 (222)
T ss_dssp CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCCCCCTH-HHHHHHHHHHHHH
T ss_pred ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhcccccccccccccccccccc-chhHHHHHHHHHh
Confidence 689999999999999999999999999999999886665 55678888888888888888765443 3444444444433
Q ss_pred -ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCC---cCCCCCCHHHHHHHHHHcCC
Q 023109 88 -CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDE---VRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 88 -~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~---~~~~kp~~~~~~~~~~~l~~ 163 (287)
....+.||+.++|++++. +.+++|++....+...+ +++++..+|+.++++.+ ....||+|+.|.++++++|+
T Consensus 81 ~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l-~~~~l~~~f~~~~~~~~~~~~~~~KP~~~~~~~~~~~l~~ 156 (222)
T d2fdra1 81 ERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMML-TKVGLKPYFAPHIYSAKDLGADRVKPKPDIFLHGAAQFGV 156 (222)
T ss_dssp HHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHH-HHTTCGGGTTTCEEEHHHHCTTCCTTSSHHHHHHHHHHTC
T ss_pred hhccchhhhHHHHhhhccc---cceeeeecchhhhhhhh-cccccccccceeecccccccccccccCHHHHHHHHHhhCC
Confidence 468889999999998864 56899999999999999 99999999997655432 46789999999999999999
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc------ccCCcEEeCCccCcCccc
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR------YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~------~~~a~~v~~~l~el~~~~ 218 (287)
+|++|+||||+..|+.+|+++|+.++++..+...... ...|+++++++.|+...+
T Consensus 157 ~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 157 SPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999999886533221 346899999999986554
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=99.96 E-value=8.2e-29 Score=199.39 Aligned_cols=199 Identities=23% Similarity=0.315 Sum_probs=158.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH-HHHhCCCHHHHHHHHHHHhCCCCCHHHH---HHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK-HKIVGKTPLEEAAIIVEDYGLPCAKHEF---VNEVYSMF 83 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 83 (287)
|+|+|+||+||||+|+...+..+++++++++|.+...... ....+.........+....+.....+.+ .....+.+
T Consensus 1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (221)
T d1o08a_ 1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLADKKVSAEEFKELAKRKNDNY 80 (221)
T ss_dssp CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTSSSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccccccchhhhhhhHHHHHHhhc
Confidence 5899999999999999888889999999999987654444 4556777777777777666655555443 33333444
Q ss_pred Hhhhc---cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHH
Q 023109 84 SDHLC---KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (287)
Q Consensus 84 ~~~~~---~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~ 160 (287)
..... ..++.||+.++|+.+++.|++++++|++.. ....+ +..++..+|+.++++++.+..||+|+.|+++++.
T Consensus 81 ~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l-~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~l~~ 157 (221)
T d1o08a_ 81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASKN--GPFLL-ERMNLTGYFDAIADPAEVAASKPAPDIFIAAAHA 157 (221)
T ss_dssp HHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHH-HHTTCGGGCSEECCTTTSSSCTTSTHHHHHHHHH
T ss_pred cccccccccccccCCceeccccccccccceEEEeecch--hhHHH-HhhccccccccccccccccccccChHHHHHHHHH
Confidence 43332 456899999999999999999999998754 45677 8889999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 161 LNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 161 l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
+|++|++|+||||+.+|+.+|+++|+++++++.+. ....++.+++++.+
T Consensus 158 ~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~~----~~~~~~~~~~~~~~ 206 (221)
T d1o08a_ 158 VGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRPE----DLGDDIVIVPDTSH 206 (221)
T ss_dssp TTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCHH----HHCSSSEEESSGGG
T ss_pred cCCCCceEEEEecCHHHHHHHHHcCCEEEEECChh----hcccccEEcCCccc
Confidence 99999999999999999999999999999998732 22233445555544
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=99.96 E-value=7.2e-29 Score=194.85 Aligned_cols=178 Identities=22% Similarity=0.259 Sum_probs=150.3
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhh
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSDH 86 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (287)
|++|+|+||+||||+|+...+..+++++++++|...+........+......+..+ .. ..+.+.+.+.+.+...
T Consensus 1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~ 74 (187)
T d2fi1a1 1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIETF----AP--NLENFLEKYKENEARE 74 (187)
T ss_dssp CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHHH----CT--TCTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhhhhh----hH--HHHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999999888877777666655443333 22 2234555565666666
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
.....++||+.++|+.++++|++++++||++....+ .+ +++++..+||.++++++....||+|+.|..+++.+++ +
T Consensus 75 ~~~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~~-~l-~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~--~ 150 (187)
T d2fi1a1 75 LEHPILFEGVSDLLEDISNQGGRHFLVSHRNDQVLE-IL-EKTSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQI--S 150 (187)
T ss_dssp TTSCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HH-HHTTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTC--S
T ss_pred hhcCcccchhHHHHHHHHhhhccccccccCccchhh-hh-hhhccccccccccccccccccCCCHHHHHHHHHHcCC--C
Confidence 667889999999999999999999999998876654 67 8889999999999999999999999999999999986 4
Q ss_pred cEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+|+||||+..|+.+|+++|+++++++++
T Consensus 151 ~~l~vgDs~~Di~aA~~aG~~~i~v~~~ 178 (187)
T d2fi1a1 151 SGLVIGDRPIDIEAGQAAGLDTHLFTSI 178 (187)
T ss_dssp SEEEEESSHHHHHHHHHTTCEEEECSCH
T ss_pred CeEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence 6999999999999999999999999873
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=99.96 E-value=8.2e-29 Score=200.47 Aligned_cols=206 Identities=21% Similarity=0.302 Sum_probs=155.7
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHc-CCCCCHHHHHHHhCCCHHHHHHHHHHHhCCCCCHHHH-------HHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKY-GKEWDGREKHKIVGKTPLEEAAIIVEDYGLPCAKHEF-------VNEVY 80 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 80 (287)
.|+|+||+||||+++...+..++.+++.+. +........ ...+..........+...+.+ .... .+.+.
T Consensus 2 ~klviFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 78 (228)
T d2hcfa1 2 RTLVLFDIDGTLLKVESMNRRVLADALIEVYGTEGSTGSH-DFSGKMDGAIIYEVLSNVGLE--RAEIADKFDKAKETYI 78 (228)
T ss_dssp CEEEEECCBTTTEEECTHHHHHHHHHHHHHHSCCCCC----CCTTCCHHHHHHHHHHTTTCC--HHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCcccCHHHHHHHHHHHHHHHcCCCccHHHH-HHhcCchHHHHHHHHHHhCCC--hHHHHHHHHHHHHHHH
Confidence 478999999999999888888888776654 444332222 233444455555555555543 2221 12222
Q ss_pred HHHHhhh--ccCCCCCcHHHHHHHHHHCC-CCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHH
Q 023109 81 SMFSDHL--CKVKALPGANRLIKHLSCHG-VPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEA 157 (287)
Q Consensus 81 ~~~~~~~--~~~~~~~g~~~~l~~l~~~g-~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~ 157 (287)
..+.+.. ...+++||+.++|+.|+++| ++++++||++...+...+ +.+|+..+||.++++++....||+|+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l-~~~gl~~~fd~i~~~~~~~~~k~~p~~~~~~ 157 (228)
T d2hcfa1 79 ALFRERARREDITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKL-KLPGIDHYFPFGAFADDALDRNELPHIALER 157 (228)
T ss_dssp HHHHHHCCGGGEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHH-HTTTCSTTCSCEECTTTCSSGGGHHHHHHHH
T ss_pred HHHHHHhhccCceecCchHHHHhhhhccccccccccCCCcchhhhhhh-hhhcccccccccccccccccccchhHHHHHH
Confidence 2222222 24578899999999999987 899999999999999999 8999999999999999999999999887766
Q ss_pred HHHc---CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc--ccCCcEEeCCccCcCccc
Q 023109 158 AKRL---NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR--YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 158 ~~~l---~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~--~~~a~~v~~~l~el~~~~ 218 (287)
+..+ +++|++|+||||+++|+.+|+++|+.++++..+....+. ...|+++++++.++.+.+
T Consensus 158 ~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 158 ARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp HHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred hhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 6655 789999999999999999999999999999876544442 457899999999987654
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2.4e-28 Score=200.00 Aligned_cols=214 Identities=18% Similarity=0.259 Sum_probs=154.9
Q ss_pred cccCCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCC--HHH--HH-----HHhC-------CCHH----HHHHHHH
Q 023109 4 PLKKLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWD--GRE--KH-----KIVG-------KTPL----EEAAIIV 63 (287)
Q Consensus 4 ~~~~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~--~~~--~~-----~~~~-------~~~~----~~~~~~~ 63 (287)
|-|++||+|+||+||||+++.......+.++++.++.... ... .. .... .... ..+...+
T Consensus 1 ~~m~~IKaviFD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (247)
T d2gfha1 1 MGLSRVRAVFFDLDNTLIDTAGASRRGMLEVIKLLQSKYHYKEEAEIICDKVQVKLSKECFHPYSTCITDVRTSHWEEAI 80 (247)
T ss_dssp EECCCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHH
T ss_pred CCCCCCcEEEEcCCCCcCcChHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHHHHHHH
Confidence 4578899999999999999988777777777765433221 111 00 0000 1111 1122223
Q ss_pred HHhCCCCCHHHHHHHHHHHHHh-hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC
Q 023109 64 EDYGLPCAKHEFVNEVYSMFSD-HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD 142 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~ 142 (287)
...........+.......+.. ......+.||+.++|+.|+ +|++++++||++...++..+ ++.|+..+||.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l-~~~gl~~~fd~i~~s~ 158 (247)
T d2gfha1 81 QETKGGADNRKLAEECYFLWKSTRLQHMILADDVKAMLTELR-KEVRLLLLTNGDRQTQREKI-EACACQSYFDAIVIGG 158 (247)
T ss_dssp HHHHCSSCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHH-HHHTCGGGCSEEEEGG
T ss_pred HHhccccchHHHHHHHHHHHHHhhhccCccCccHHHHHHHhh-cccceEEeecccchhhhhhh-hhcccccccccccccc
Confidence 3333333333443333333322 2346788999999999998 57899999999999999889 8889999999999999
Q ss_pred CcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEE-ECCCC-CccccccCCcEEeCCccCcCcccc
Q 023109 143 EVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVA-VPSLP-KQTHRYTAADEVINSLLDLRPEKW 219 (287)
Q Consensus 143 ~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~-v~~~~-~~~~~~~~a~~v~~~l~el~~~~~ 219 (287)
+.+..||+|++|..+++.+|++|++|+||||+. +|+.+|+++|+.+++ ++... ........|++++.++.++.+.+.
T Consensus 159 ~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll~ 238 (247)
T d2gfha1 159 EQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPLTSSPMPHYMVSSVLELPALLQ 238 (247)
T ss_dssp GSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCSSCCCCCSEEESSGGGHHHHHH
T ss_pred ccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcccccCCCCEEECCHHHHHHHHH
Confidence 999999999999999999999999999999997 799999999998554 44432 223335678999999999876654
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=1.2e-28 Score=199.85 Aligned_cols=205 Identities=19% Similarity=0.262 Sum_probs=152.4
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCC-CCCHHHHH------------HHhC---CCHH----HHHHHHHHHhC
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGK-EWDGREKH------------KIVG---KTPL----EEAAIIVEDYG 67 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~-~~~~~~~~------------~~~~---~~~~----~~~~~~~~~~~ 67 (287)
|+|+|+||+||||+|+........+.+.+.++. ........ ...+ .... +.+.......+
T Consensus 1 MiK~I~FD~dGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (230)
T d1x42a1 1 MIRAVFFDFVGTLLSVEGEAKTHLKIMEEVLGDYPLNPKTLLDEYEKLTREAFSNYAGKPYRPIRDIEEEVMRKLAEKYG 80 (230)
T ss_dssp CCCEEEECSBTTTBCHHHHHHHHHHHHHHHHTTCSSCHHHHHHHHHHHHHHHHHHHTTSBCCCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEeCCCCcEechhhHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence 589999999999999887776666666555542 22222111 1111 1111 12233333443
Q ss_pred CCCCHHHHHHHHHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCC
Q 023109 68 LPCAKHEFVNEVYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTG 147 (287)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~ 147 (287)
.... +.+.+....... ....++||+.++|+.+++ |++++++||++...++..+ +++|+.++||.++++++.+..
T Consensus 81 ~~~~-~~~~~~~~~~~~---~~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l-~~~gl~~~fd~i~~s~~~~~~ 154 (230)
T d1x42a1 81 FKYP-ENFWEIHLRMHQ---RYGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHL-DALGIKDLFDSITTSEEAGFF 154 (230)
T ss_dssp CCCC-TTHHHHHHHHHH---HHCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHH-HHHTCGGGCSEEEEHHHHTBC
T ss_pred hchH-HHHHHHHHHHHH---hhCcccccHHHHHHHhhc-cCceeeeeccccccchhhh-ccccccccccccccccccccc
Confidence 3311 112111111111 246788999999999974 7999999999999999999 889999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 148 kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
||+|++|..+++++|++|++|++|||+. +|+.+|+++|+.+++++.+.........++++++|+.++...+
T Consensus 155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCcccccCCCEEECCHHHHHHHH
Confidence 9999999999999999999999999996 7999999999999999887666666778899999999986554
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=99.95 E-value=1.4e-26 Score=185.88 Aligned_cols=129 Identities=16% Similarity=0.248 Sum_probs=116.8
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPS 166 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~ 166 (287)
.....+++++.++++.+++.|++++++||++....+..+ .+.++..+||.++++++.+..||+|+.|..+++.+|++|+
T Consensus 89 ~~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~fd~~~~s~~~~~~KP~p~~~~~~~~~~g~~p~ 167 (220)
T d1zrna_ 89 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVV-SHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRS 167 (220)
T ss_dssp GGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGG
T ss_pred hccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHH-hhccccccccceeeeeeeeccccHHHHHHHHHHHhCCCCc
Confidence 345778999999999999999999999999999999888 8899999999999999999999999999999999999999
Q ss_pred cEEEEeCCHhhHHHHHHcCCeEEEECCC-CCccccccCCcEEeCCccCcCc
Q 023109 167 SSLVIEDSVIGVVAGKAAGMEVVAVPSL-PKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 167 ~~l~iGDs~~Dv~~a~~aG~~~i~v~~~-~~~~~~~~~a~~v~~~l~el~~ 216 (287)
+|+||||++.|+.+|+++|+++++++++ ....+....|+++++++.++.+
T Consensus 168 e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~~~~~d~~i~~l~el~~ 218 (220)
T d1zrna_ 168 AILFVASNAWDATGARYFGFPTCWINRTGNVFEEMGQTPDWEVTSLRAVVE 218 (220)
T ss_dssp GEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSSSCCCSEEESSHHHHHT
T ss_pred eEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccccCCCCEEECCHHHHHh
Confidence 9999999999999999999999999864 3334445678999999998764
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=6.2e-26 Score=185.13 Aligned_cols=127 Identities=13% Similarity=0.105 Sum_probs=109.8
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc-CCcCCCCCCHHHHHHHHHHcCCCC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-DEVRTGKPSPDIFLEAAKRLNMEP 165 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~-~~~~~~kp~~~~~~~~~~~l~~~~ 165 (287)
.....++||+.+++++++++|++++++||++....+..+ +..++.++|+....+ +.....||+|++|..+++++|++|
T Consensus 123 ~~~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~KP~p~~~~~~~~~~~~~p 201 (253)
T d1zs9a1 123 RMKAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLF-GHSTEGDILELVDGHFDTKIGHKVESESYRKIADSIGCST 201 (253)
T ss_dssp SCCBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HTBTTBCCGGGCSEEECGGGCCTTCHHHHHHHHHHHTSCG
T ss_pred hcccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHH-HHcCcchhhhhcceeeccccccCCCcHHHHHHHHHhCCCc
Confidence 346778999999999999999999999999999988888 888988888765443 556779999999999999999999
Q ss_pred CcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccc--cccCCcEEeCCccCc
Q 023109 166 SSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTH--RYTAADEVINSLLDL 214 (287)
Q Consensus 166 ~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~--~~~~a~~v~~~l~el 214 (287)
++|+||||+.+|+.+|+++|+++++++..+.... ....++.+++|+.|+
T Consensus 202 ~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~~~~~~~~~~~~~~i~sl~EL 252 (253)
T d1zs9a1 202 NNILFLTDVTREASAAEEADVHVAVVVRPGNAGLTDDEKTYYSLITSFSEL 252 (253)
T ss_dssp GGEEEEESCHHHHHHHHHTTCEEEEECCTTCCCCCHHHHHHSCEESSGGGC
T ss_pred CcEEEEeCCHHHHHHHHHcCCEEEEEeCCCCCCCchhhcCCCcEECChHHh
Confidence 9999999999999999999999999987433322 245668899999886
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=99.94 E-value=1.2e-26 Score=189.27 Aligned_cols=134 Identities=22% Similarity=0.328 Sum_probs=115.3
Q ss_pred HHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHc
Q 023109 82 MFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRL 161 (287)
Q Consensus 82 ~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l 161 (287)
.+.+.+...+++|++.+.|+.++ ++.++++|+++...+...+ .+.++..+||.++++++.+..||+|++|..+++++
T Consensus 84 ~l~~~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~-~~~~~~~~fd~v~~s~~~~~~KP~p~~f~~a~~~l 160 (245)
T d1qq5a_ 84 DMAQAYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALV-ANAGLTDSFDAVISVDAKRVFKPHPDSYALVEEVL 160 (245)
T ss_dssp HHHGGGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHH-HHTTCGGGCSEEEEGGGGTCCTTSHHHHHHHHHHH
T ss_pred HHHhcccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHH-hhcccccccccccccccccccCccHHHHHHHHHHh
Confidence 34444556788999999999886 5789999999999999888 88999999999999999999999999999999999
Q ss_pred CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCc------------------------cccccCCcEEeCCccCcCcc
Q 023109 162 NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ------------------------THRYTAADEVINSLLDLRPE 217 (287)
Q Consensus 162 ~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~------------------------~~~~~~a~~v~~~l~el~~~ 217 (287)
|++|++|+||||+.+|+.+|+++|+++++++..... ......||++++++.|+.+.
T Consensus 161 g~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~~i~~l~el~~l 240 (245)
T d1qq5a_ 161 GVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRL 240 (245)
T ss_dssp CCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHH
T ss_pred CCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhhhhccCCCCEEECCHHHHHHH
Confidence 999999999999999999999999999999863210 11134689999999998765
Q ss_pred c
Q 023109 218 K 218 (287)
Q Consensus 218 ~ 218 (287)
+
T Consensus 241 v 241 (245)
T d1qq5a_ 241 V 241 (245)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: Protein UTR4 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.90 E-value=6.9e-23 Score=164.27 Aligned_cols=202 Identities=11% Similarity=0.042 Sum_probs=125.7
Q ss_pred CccEEEEecCCcccccHHHH-------HHHHHHHHHHcCCCCCHHHHHH-HhCCCHHHHHHHHHHHhCCCCCHHHHHHHH
Q 023109 8 LMSCVILDLDGTLLNTDGMF-------SEVLKTFLVKYGKEWDGREKHK-IVGKTPLEEAAIIVEDYGLPCAKHEFVNEV 79 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~-------~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (287)
++++|+||+||||+|++... .+.+.+++.+.+.......... ..............................
T Consensus 2 ~~~~~lfD~dGTl~d~~~v~d~lfp~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (225)
T d2g80a1 2 NYSTYLLDIEGTVCPISFVKETLFPYFTNKVPQLVQQDTRDSPVSNILSQFHIDNKEQLQAHILELVAKDVKDPILKQLQ 81 (225)
T ss_dssp CCSEEEECCBTTTBCTHHHHHTHHHHHHHHHHHHHHSCCTTSHHHHHHHTTCCCCHHHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred CCCEEEEcCCCCCcccHhhhhhhhHHHHHHHHHHHHHhcCChHHHHHHHHhhhhhHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 58999999999999975321 2223333333333322222222 222233333222222221111111111111
Q ss_pred HHHHHhhh----ccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHH----------HhhcCCccccceeeccCCcC
Q 023109 80 YSMFSDHL----CKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKI----------SYQHGWNESFSVIVGSDEVR 145 (287)
Q Consensus 80 ~~~~~~~~----~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l----------~~~~gl~~~fd~i~~~~~~~ 145 (287)
.......+ ....+.+++.+++. .+..+++.|+.......... ....|+.++|+.+++++...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~~~~ 157 (225)
T d2g80a1 82 GYVWAHGYESGQIKAPVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDINTSG 157 (225)
T ss_dssp HHHHHHHHHTTSCCBCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHHHHC
T ss_pred HHHHHHHHHhhcccccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeeccccC
Confidence 11112222 23445566666554 44678888887665433222 04568889999999886554
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCc
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDL 214 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el 214 (287)
.||+|++|..+++++|+.|++|+||||+.+|+.+|+++|++++++++.+........+..++.++.||
T Consensus 158 -~KP~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g~~~~~~~~~~~~i~~~~eL 225 (225)
T d2g80a1 158 -KKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGNAPVPDGQKYQVYKNFETL 225 (225)
T ss_dssp -CTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTSCCCCSSCCSCEESCSTTC
T ss_pred -CCCChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCCCCCCcccCCCCccCChhhC
Confidence 79999999999999999999999999999999999999999999987555555556667788888775
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.88 E-value=6e-24 Score=170.50 Aligned_cols=108 Identities=15% Similarity=0.174 Sum_probs=95.6
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCCh----HHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHR----ATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~----~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
.....++|++.++|..++++|++++++|++.. ....... ...++.++||.++++++++..||+|+.|.++++.++
T Consensus 93 ~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~-~~~~l~~~fd~i~~s~~~~~~KP~p~~~~~~~~~~~ 171 (222)
T d1cr6a1 93 MAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQ-MMCELSQHFDFLIESCQVGMIKPEPQIYNFLLDTLK 171 (222)
T ss_dssp HHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHH-HHHHHGGGCSEEEEHHHHSCCTTCHHHHHHHHHHHT
T ss_pred HhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHH-HhcChHhhhceeeehhhccCCCCChHHHHHHHHHhC
Confidence 34567899999999999999999999998532 2334444 667899999999999999999999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
++|++|+||||+..|+.+|+++|+++++|.++.
T Consensus 172 v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~ 204 (222)
T d1cr6a1 172 AKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA 204 (222)
T ss_dssp SCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred CCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence 999999999999999999999999999998743
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=3.6e-23 Score=165.64 Aligned_cols=107 Identities=18% Similarity=0.191 Sum_probs=93.7
Q ss_pred hccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHH----HHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcC
Q 023109 87 LCKVKALPGANRLIKHLSCHGVPMALASNSHRATIE----SKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLN 162 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~----~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~ 162 (287)
.....++|++.+++..++++|++++++||....... ... ...++.++||.++++++.+..||+|+.|.++++.+|
T Consensus 95 ~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~-~~~~~~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~ 173 (225)
T d1zd3a1 95 ISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQ-LMCELKMHFDFLIESCQVGMVKPEPQIYKFLLDTLK 173 (225)
T ss_dssp HHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHH-HHHHHHTTSSEEEEHHHHTCCTTCHHHHHHHHHHHT
T ss_pred hhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHh-hhcChHhhccEEEeccccccchhHHHHHHHHhhhcc
Confidence 345678999999999999999999999987544322 222 445677889999999999999999999999999999
Q ss_pred CCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 163 MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 163 ~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
++|++|+||||+..|+.+|+++|+++++++++
T Consensus 174 ~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~~ 205 (225)
T d1zd3a1 174 ASPSEVVFLDDIGANLKPARDLGMVTILVQDT 205 (225)
T ss_dssp CCGGGEEEEESCHHHHHHHHHTTCEEEECSSH
T ss_pred cCccceeEEecCHHHHHHHHHcCCEEEEECCc
Confidence 99999999999999999999999999999873
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=6.6e-23 Score=160.46 Aligned_cols=175 Identities=16% Similarity=0.180 Sum_probs=124.8
Q ss_pred EEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHH------------hCCCHHHHHHHHHHHhCCCCCHHHHHHH
Q 023109 11 CVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKI------------VGKTPLEEAAIIVEDYGLPCAKHEFVNE 78 (287)
Q Consensus 11 ~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (287)
+++||+||||+|++. ...+..+.+..+... ...... ..................+........
T Consensus 2 l~iFDlDgtL~d~~~--~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 76 (197)
T d2b0ca1 2 LYIFDLGNVIVDIDF--NRVLGAWSDLTRIPL--ASLKKSFHMGEAFHQHERGEISDEAFAEALCHEMALPLSYEQFSH- 76 (197)
T ss_dssp EEEECCBTTTEEEET--HHHHHHHHHHHCCCH--HHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHHTCCCCHHHHHH-
T ss_pred EEEEeCCCCcCcCHH--HHHHHHHHHHhCCCH--HHHHHHHhcccHHHHHHhccccHHHHHHHHhhhhccchhHHHHHH-
Confidence 478999999998743 223333333334332 111111 112233344444444444332222211
Q ss_pred HHHHHHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHH
Q 023109 79 VYSMFSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAA 158 (287)
Q Consensus 79 ~~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~ 158 (287)
.... ....+.+++.+++..++.+|++++++|+++.......+....++..+|+.++++++.+..||+|++|+.++
T Consensus 77 ---~~~~--~~~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s~~~~~~Kp~~~~~~~~~ 151 (197)
T d2b0ca1 77 ---GWQA--VFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVL 151 (197)
T ss_dssp ---HHHT--CEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHHHHTCCTTCHHHHHHHH
T ss_pred ---HHHH--hccccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeecccccccccchHHHHHHH
Confidence 1111 23567899999999999999999999999877776666233478889999999999999999999999999
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
+.+|++|++|+||||+.+|+.+|+++|+++++++...
T Consensus 152 ~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~~ 188 (197)
T d2b0ca1 152 QAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDKT 188 (197)
T ss_dssp HHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCSTT
T ss_pred HhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCCC
Confidence 9999999999999999999999999999999998743
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=6.4e-23 Score=157.06 Aligned_cols=103 Identities=13% Similarity=0.131 Sum_probs=90.8
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH-HHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT-IESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSS 167 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~-~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~ 167 (287)
.+.++||+.++|+.|+++|++++++|+++... .+..+ +++++..+|+.+.+ ..||+|+.+.++++.+|++|++
T Consensus 44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l-~~~~~~~~~~~~~~-----~~kp~~~~~~~~~~~~~~~~~~ 117 (164)
T d1u7pa_ 44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLL-ELFDLGKYFIQREI-----YPGSKVTHFERLHHKTGVPFSQ 117 (164)
T ss_dssp EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHTTCGGGCSEEEE-----SSSCHHHHHHHHHHHHCCCGGG
T ss_pred ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccch-hcccccccceeeec-----ccCCChHHHHHHHHHhCCChHH
Confidence 56899999999999999999999999887654 44455 88898888887754 3689999999999999999999
Q ss_pred EEEEeCCHhhHHHHHHcCCeEEEECCCCCc
Q 023109 168 SLVIEDSVIGVVAGKAAGMEVVAVPSLPKQ 197 (287)
Q Consensus 168 ~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~ 197 (287)
|+||||+..|+.+|+++|+.++++..+...
T Consensus 118 ~l~igD~~~di~aA~~aG~~~i~v~~G~~~ 147 (164)
T d1u7pa_ 118 MVFFDDENRNIIDVGRLGVTCIHIRDGMSL 147 (164)
T ss_dssp EEEEESCHHHHHHHHTTTCEEEECSSCCCH
T ss_pred EEEEcCCHHHHHHHHHcCCEEEEECCCCCh
Confidence 999999999999999999999999887543
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=99.85 E-value=3.3e-22 Score=160.86 Aligned_cols=208 Identities=13% Similarity=0.108 Sum_probs=135.7
Q ss_pred CccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHH-HhC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHh
Q 023109 8 LMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHK-IVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMFSD 85 (287)
Q Consensus 8 ~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (287)
+..+|+||+||||++++.. ..+++.++.......... ..+ .............. .......+....
T Consensus 3 ~k~lVifD~DGTL~~~d~~-----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~-- 70 (226)
T d2feaa1 3 RKPFIICDFDGTITMNDNI-----INIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLL-----PSSLKEEITSFV-- 70 (226)
T ss_dssp CCEEEEECCTTTTBSSCHH-----HHHHHHHSCTHHHHHHHHHHTTSSCHHHHHHHHHTTS-----BGGGHHHHHHHH--
T ss_pred CCeEEEEeCCCCCcCchHH-----HHHHHHHCcchHHHHHHHHHcCcccHHHHHHHHHHHh-----ccccHHHHHHHH--
Confidence 3457999999999988532 333444443311111111 111 12222222221111 111112222211
Q ss_pred hhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccce---eecc----------CCcCCCCCCHH
Q 023109 86 HLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV---IVGS----------DEVRTGKPSPD 152 (287)
Q Consensus 86 ~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~---i~~~----------~~~~~~kp~~~ 152 (287)
....+++||+.++++.++++|++++++|++....++..+ +++++.++|.. .+.. ......++++.
T Consensus 71 -~~~~~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l-~~l~~~~~~~an~~~~~~~~~~~~~~~~~~~~~~~~k~~ 148 (226)
T d2feaa1 71 -LEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLL-EGIVEKDRIYCNHASFDNDYIHIDWPHSCKGTCSNQCGC 148 (226)
T ss_dssp -HHHCCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-TTTSCGGGEEEEEEECSSSBCEEECTTCCCTTCCSCCSS
T ss_pred -HhccchhHHHHHHHHHHHhcccccccCCcchhhhHHHHH-HHcCCccceeeeeEEEeCCcceeccccccccccccCCHH
Confidence 235679999999999999999999999999999999999 88888665522 1111 12233567778
Q ss_pred HHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccccCCCCccccccC
Q 023109 153 IFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEKWGLPPFQDWIEG 230 (287)
Q Consensus 153 ~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~~~~~~~~~w~~~ 230 (287)
.+.++++.+++++++++|||||.+|++||++||+.+++... .........+...+.++.++...+..+....+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~~~-~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~~~~~~~ 225 (226)
T d2feaa1 149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYL-LNECREQNLNHLPYQDFYEIRKEIENVKEVQEWLQN 225 (226)
T ss_dssp CHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHHH-HHHHHHTTCCEECCSSHHHHHHHHHTSHHHHHHHTC
T ss_pred HHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEecch-HHHHHHcCCCeeecCCHHHHHHHHHHHHHHHHHhhC
Confidence 88999999999999999999999999999999965443221 111112344567789999998888888889999987
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=99.82 E-value=3e-20 Score=144.39 Aligned_cols=127 Identities=21% Similarity=0.256 Sum_probs=95.9
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChH---------------HHHHHHHhhcCCccccce-eec-----------c
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRA---------------TIESKISYQHGWNESFSV-IVG-----------S 141 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~---------------~~~~~l~~~~gl~~~fd~-i~~-----------~ 141 (287)
.+.++||+.++|+.|+++|++++++||.+.. .....+ ...+.. ++. .+| .
T Consensus 25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~cp~~p~~~~~~~~ 101 (182)
T d2gmwa1 25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSL-ADRDVD--LDGIYYCPHHPQGSVEEFR 101 (182)
T ss_dssp GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHH-HHTTCC--CSEEEEECCBTTCSSGGGB
T ss_pred HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhh-hhhccc--ccceeeccccccccccccc
Confidence 4578899999999999999999999998631 111122 222221 222 222 2
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeE-EEECCCCCcccc-ccCCcEEeCCccCcCccc
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEV-VAVPSLPKQTHR-YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~-i~v~~~~~~~~~-~~~a~~v~~~l~el~~~~ 218 (287)
+++...||+|..+.++++.+++++++++||||+.+|+.+|++||+.+ +++.+++..... ...++++++++.|+.+.+
T Consensus 102 ~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 102 QVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp SCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred ccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 34567899999999999999999999999999999999999999965 667766544333 456899999999987654
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=99.81 E-value=6.9e-21 Score=144.45 Aligned_cols=106 Identities=16% Similarity=0.169 Sum_probs=81.2
Q ss_pred ccCCCCCcHHHHHHHHHHCCCCEEEEeCCCh---------------HHHHHHHHhhcCCcc---ccceeeccCCcCCCCC
Q 023109 88 CKVKALPGANRLIKHLSCHGVPMALASNSHR---------------ATIESKISYQHGWNE---SFSVIVGSDEVRTGKP 149 (287)
Q Consensus 88 ~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~---------------~~~~~~l~~~~gl~~---~fd~i~~~~~~~~~kp 149 (287)
..+.++||+.++|+.|+++|++++++||.+. ......+ ...|+.. +|+.....+++...||
T Consensus 27 ~~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l-~~~~~~~~~i~~~~~~~~~~~~~~KP 105 (161)
T d2fpwa1 27 DKLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF-TSQGVQFDEVLICPHLPADECDCRKP 105 (161)
T ss_dssp GGCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHH-HHTTCCEEEEEEECCCGGGCCSSSTT
T ss_pred HHceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhc-cccccccceeeecccccccccccccc
Confidence 3567899999999999999999999999751 1223334 4444421 2333344566778899
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+|+.+.++++.++++|++++||||+..|+.+|++||++++++++.
T Consensus 106 ~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~ 150 (161)
T d2fpwa1 106 KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE 150 (161)
T ss_dssp SSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence 999999999999999999999999999999999999999999774
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=6.3e-20 Score=146.59 Aligned_cols=192 Identities=14% Similarity=0.104 Sum_probs=115.8
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHH--HHHhC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREK--HKIVG-KTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
...++|+||+||||++++. +..+....|........ +...| .+..+.+......+.. ...+.. +..
T Consensus 8 ~~~~aV~FD~DGTLi~~e~-----~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~----~~~ 76 (217)
T d1nnla_ 8 YSADAVCFDVDSTVIREEG-----IDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQP--SREQVQ----RLI 76 (217)
T ss_dssp HHCSEEEEETBTTTBSSCH-----HHHHHHHTTCTTTC------------CHHHHHHHHHHHHCC--CHHHHH----HHH
T ss_pred CCCCEEEEcCccccCCccH-----HHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhccc--chHHHH----HHH
Confidence 3468999999999999853 34445555654221111 11111 1223333332222221 122221 111
Q ss_pred HhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccc--c----c----eeeccCCc----CCCCC
Q 023109 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNES--F----S----VIVGSDEV----RTGKP 149 (287)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~--f----d----~i~~~~~~----~~~kp 149 (287)
.+ ....++||+.+++++++++|++++++|++....++..+ +.+|+... + + ..+..... .....
T Consensus 77 ~~--~~~~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~-~~lgi~~~~v~an~~~~~~~G~~~g~~~~~p~~~~~~ 153 (217)
T d1nnla_ 77 AE--QPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVA-SKLNIPATNVFANRLKFYFNGEYAGFDETQPTAESGG 153 (217)
T ss_dssp HH--SCCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHTTCCGGGEEEECEEECTTSCEEEECTTSGGGSTTH
T ss_pred Hh--hccccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHH-HHhCCcccceeeeeeeeeehhccccceeeeeeeccch
Confidence 11 34678899999999999999999999999999999999 88998642 1 1 11111001 11122
Q ss_pred CHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcC
Q 023109 150 SPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLR 215 (287)
Q Consensus 150 ~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~ 215 (287)
+....+.... +.++++|++||||.+|+++++.||..+++.+. .........+++++.++.|+.
T Consensus 154 K~~~v~~~~~--~~~~~~~~~vGDs~~Di~~~~~ag~~va~~~~-~~~~~~~~~ad~~i~~f~ell 216 (217)
T d1nnla_ 154 KGKVIKLLKE--KFHFKKIIMIGDGATDMEACPPADAFIGFGGN-VIRQQVKDNAKWYITDFVELL 216 (217)
T ss_dssp HHHHHHHHHH--HHCCSCEEEEESSHHHHTTTTTSSEEEEECSS-CCCHHHHHHCSEEESCGGGGC
T ss_pred HHHHHHHHHh--ccCccccEEEEeCHhhHHHHHhCCceEEECCC-HHHHHHHHhCCCEeCCHHHhc
Confidence 3334444433 35678999999999999999999987554332 223344567899999988774
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=99.79 E-value=3.7e-20 Score=151.19 Aligned_cols=82 Identities=22% Similarity=0.330 Sum_probs=68.5
Q ss_pred ccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----ccCCcEEe
Q 023109 134 SFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVI 208 (287)
Q Consensus 134 ~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~ 208 (287)
.|+...+++.....||+|..+..+++++|++|++|+||||++ +|+.+|+++|+++++|.+|....+. ...||+++
T Consensus 162 ~~~~~~~~~~~~~~KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV~~G~~~~~~l~~~~~~pd~i~ 241 (250)
T d2c4na1 162 GIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIY 241 (250)
T ss_dssp HHHHHHCCCCEECSTTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEE
T ss_pred HHHHhhcccchhcccchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhCCCCCCEEE
Confidence 345555566667889999999999999999999999999998 5999999999999999887544433 23569999
Q ss_pred CCccCcC
Q 023109 209 NSLLDLR 215 (287)
Q Consensus 209 ~~l~el~ 215 (287)
+|+.|+.
T Consensus 242 ~sl~eL~ 248 (250)
T d2c4na1 242 PSVAEID 248 (250)
T ss_dssp SSGGGCC
T ss_pred CCHHHhC
Confidence 9999974
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=99.79 E-value=1.9e-19 Score=142.26 Aligned_cols=191 Identities=16% Similarity=0.157 Sum_probs=126.2
Q ss_pred CCccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHH--HH-hCCCHHHHHHHHHHHhCCCCCHHHHHHHHHHHH
Q 023109 7 KLMSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKH--KI-VGKTPLEEAAIIVEDYGLPCAKHEFVNEVYSMF 83 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
++.|+|+||+||||++++. +..+.+..|......... .. ................. .... ...
T Consensus 2 ~kkKlv~FDlDGTL~d~es-----~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~ 67 (210)
T d1j97a_ 2 KKKKLILFDFDSTLVNNET-----IDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLK-DLPI--------EKV 67 (210)
T ss_dssp CCCCEEEECCCCCCBSSCH-----HHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTTT-TCBH--------HHH
T ss_pred CCCeEEEEeCCCCcCCchH-----HHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHHHHHHHh-hhHH--------HHH
Confidence 3579999999999999853 344555555421111110 01 11111111111111111 0001 111
Q ss_pred HhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc----------CCcCCCCCCHHH
Q 023109 84 SDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS----------DEVRTGKPSPDI 153 (287)
Q Consensus 84 ~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~----------~~~~~~kp~~~~ 153 (287)
.......++.+++.+.++.+...|..++++|+.....+.... ...+....+...... ......++++..
T Consensus 68 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (210)
T d1j97a_ 68 EKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIK-EKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEI 146 (210)
T ss_dssp HHHHHTCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHH-HHHTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHH
T ss_pred HHHhhhhhhhhhHHHHHHHHHHcCCEEEeecccccccccchh-hccchhhhhhhhhccccccccccccccccccccccch
Confidence 222345788999999999999999999999999888888777 666666555443332 233456677888
Q ss_pred HHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCc--cCcCc
Q 023109 154 FLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL--LDLRP 216 (287)
Q Consensus 154 ~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l--~el~~ 216 (287)
....++.+++.++++++||||.||++|++.||+.+++ +. .+..++.|++++++. .++.+
T Consensus 147 ~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~-na---~~~lk~~Ad~vi~~~d~~~vl~ 207 (210)
T d1j97a_ 147 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF-CA---KPILKEKADICIEKRDLREILK 207 (210)
T ss_dssp HHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE-SC---CHHHHTTCSEEECSSCGGGGGG
T ss_pred hhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE-CC---CHHHHHhCCEEEcCCCHHHHHH
Confidence 9999999999999999999999999999999998776 43 456677899999854 44443
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=99.78 E-value=3.6e-19 Score=140.64 Aligned_cols=104 Identities=21% Similarity=0.351 Sum_probs=80.6
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCCh--------H-------HHHHHHHhhcCCccccceeecc------------
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHR--------A-------TIESKISYQHGWNESFSVIVGS------------ 141 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~--------~-------~~~~~l~~~~gl~~~fd~i~~~------------ 141 (287)
+..++||+.++|+.|+++|++++++||.+. . .....+ ...|. .++.++.+
T Consensus 46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l-~~~g~--~~~~~~~~~~~~~~~~~~~~ 122 (209)
T d2o2xa1 46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELL-REEGV--FVDMVLACAYHEAGVGPLAI 122 (209)
T ss_dssp GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHH-HHTTC--CCSEEEEECCCTTCCSTTCC
T ss_pred HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHh-hhccc--ccceEEEecccccccccccc
Confidence 356889999999999999999999998541 1 122223 23332 23333322
Q ss_pred CCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCC
Q 023109 142 DEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLP 195 (287)
Q Consensus 142 ~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~ 195 (287)
.++...||+|.++.++++.+++++++|+||||+.+|+.+|++||+.++++..+.
T Consensus 123 ~~~~~rKP~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 123 PDHPMRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp SSCTTSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCC
T ss_pred cccccccccchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCCC
Confidence 234457999999999999999999999999999999999999999999987754
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=99.75 E-value=6.8e-19 Score=143.83 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=79.6
Q ss_pred HHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcC---CccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeC
Q 023109 97 NRLIKHLSCHGVPMALASNSHRATIESKISYQHG---WNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIED 173 (287)
Q Consensus 97 ~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~g---l~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGD 173 (287)
...+..+..++...+++||.+........ ...+ +...+....+.+....+||+|.+|..+++++|++|++|+||||
T Consensus 127 ~~~~~~~~~~~~~~~i~tn~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~mIGD 205 (253)
T d1wvia_ 127 KLTLATLAIQKGAVFIGTNPDLNIPTERG-LLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGD 205 (253)
T ss_dssp HHHHHHHHHHTTCEEEESCCCSEEEETTE-EEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEEEES
T ss_pred HHHHHhhhhhhccccccCCCCceeEcCCc-ccccCCcchhcccccccceeEEeccCCcccceehhhhccccccceEEEcC
Confidence 33344344445677788887543221100 0011 1111233334444556799999999999999999999999999
Q ss_pred CHh-hHHHHHHcCCeEEEECCCCCcccc----ccCCcEEeCCccCc
Q 023109 174 SVI-GVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDL 214 (287)
Q Consensus 174 s~~-Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~~~l~el 214 (287)
++. |+.+|+++|+++++|.+|..+.+. ...||++++|+.|+
T Consensus 206 s~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~e~ 251 (253)
T d1wvia_ 206 NYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLAEW 251 (253)
T ss_dssp CTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGGGC
T ss_pred ChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHHHc
Confidence 985 999999999999999887543332 33569999999886
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=99.74 E-value=3.9e-18 Score=139.87 Aligned_cols=74 Identities=22% Similarity=0.288 Sum_probs=63.6
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCcccc----ccCCcEEeCCccCcCcc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTHR----YTAADEVINSLLDLRPE 217 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~~----~~~a~~v~~~l~el~~~ 217 (287)
...+||+|..+..+++.+|++|++++||||++ +|+.+|+++|+.+++|.+|...... ...||++++++.|+.+.
T Consensus 181 ~~~~KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 181 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred cccCCCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 34579999999999999999999999999997 6999999999999999887554432 34579999999988654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.72 E-value=1.2e-18 Score=142.24 Aligned_cols=80 Identities=21% Similarity=0.262 Sum_probs=67.3
Q ss_pred cceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHHHcCCeEEEECCCCCccc----cccCCcEEeC
Q 023109 135 FSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGKAAGMEVVAVPSLPKQTH----RYTAADEVIN 209 (287)
Q Consensus 135 fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~~aG~~~i~v~~~~~~~~----~~~~a~~v~~ 209 (287)
++...+++....+||+|.+|.++++++|++|++|+||||++ +|+.+|+++|+.+++|.+|....+ ....||++++
T Consensus 167 ~~~~~~~~~~~~~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~~G~~~~~~~~~~~~~Pd~vi~ 246 (253)
T d1yv9a1 167 VETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTSGFTPKSAVPTLPTPPTYVVD 246 (253)
T ss_dssp HHHHHTCCCEECSTTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETTSSSCSSSTTTCSSCCSEEES
T ss_pred ccccccceeeeecccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEECCCCCCHHHHHhcCCCCCEEEC
Confidence 44455666677899999999999999999999999999998 599999999999999988654332 2455799999
Q ss_pred CccCc
Q 023109 210 SLLDL 214 (287)
Q Consensus 210 ~l~el 214 (287)
|+.|+
T Consensus 247 sl~e~ 251 (253)
T d1yv9a1 247 SLDEW 251 (253)
T ss_dssp SGGGC
T ss_pred CHHHc
Confidence 99986
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.67 E-value=8.6e-17 Score=138.57 Aligned_cols=131 Identities=19% Similarity=0.225 Sum_probs=109.4
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccce--eeccC-----------CcCCCCCCHHHHHHH
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSV--IVGSD-----------EVRTGKPSPDIFLEA 157 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~--i~~~~-----------~~~~~kp~~~~~~~~ 157 (287)
++.+|+.++|+.|+++|++++++|+.+...++..+ +.+|+.++|+. +++.+ .....||+|..+.++
T Consensus 215 ~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il-~~lgl~~~F~~~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~~ 293 (380)
T d1qyia_ 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPF-ENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAA 293 (380)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCGGGSCGGGEECHHHHHHHHHHSTTSCCCCTTSTHHHHHH
T ss_pred cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH-HHcCCcccCCcceEEecchhhhhhhhccccccccCCChHHHHHH
Confidence 35669999999999999999999999999999999 89999999874 34332 346789999999988
Q ss_pred HHHc--------------CCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCcccc-----ccCCcEEeCCccCcCccc
Q 023109 158 AKRL--------------NMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHR-----YTAADEVINSLLDLRPEK 218 (287)
Q Consensus 158 ~~~l--------------~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~-----~~~a~~v~~~l~el~~~~ 218 (287)
+..+ +..++.|+||||+.+|+++|++||+.++++.+|...... ...||++++++.++...+
T Consensus 294 ~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 294 LYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp HHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred HHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 7544 567889999999999999999999999999887554432 347899999999998776
Q ss_pred cCCC
Q 023109 219 WGLP 222 (287)
Q Consensus 219 ~~~~ 222 (287)
..+.
T Consensus 374 ~~l~ 377 (380)
T d1qyia_ 374 DNLL 377 (380)
T ss_dssp SCTT
T ss_pred HHHH
Confidence 5544
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=99.60 E-value=1.8e-15 Score=113.07 Aligned_cols=105 Identities=14% Similarity=0.021 Sum_probs=73.7
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhc----C-CccccceeeccCCcCCCCCCHHHHHHHHHH
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQH----G-WNESFSVIVGSDEVRTGKPSPDIFLEAAKR 160 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~----g-l~~~fd~i~~~~~~~~~kp~~~~~~~~~~~ 160 (287)
...++|++.++|+.++++|+.++++||.+... ....+..+. . ....++...... ....+|+.......+..
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~k~~~l~~ 112 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQRE-QGDTRKDDVVKEEIFWK 112 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEECC-TTCCSCHHHHHHHHHHH
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeeccc-ccccCCchHHHHHHHHH
Confidence 45689999999999999999999999986322 122221100 0 111233433333 34456667777888888
Q ss_pred cCCCCCc-EEEEeCCHhhHHHHHHcCCeEEEECCC
Q 023109 161 LNMEPSS-SLVIEDSVIGVVAGKAAGMEVVAVPSL 194 (287)
Q Consensus 161 l~~~~~~-~l~iGDs~~Dv~~a~~aG~~~i~v~~~ 194 (287)
+..++.+ +++|||++.|+++|+++|++++.|..|
T Consensus 113 ~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~~G 147 (149)
T d1ltqa1 113 HIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVASG 147 (149)
T ss_dssp HTTTTCEEEEEEECCHHHHHHHHHTTCCEEECSCC
T ss_pred hccCCCceEEEEcCCHHHHHHHHHCCCcEEEeCCC
Confidence 7766665 567899999999999999999999875
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.54 E-value=1.1e-14 Score=114.04 Aligned_cols=185 Identities=16% Similarity=0.122 Sum_probs=117.2
Q ss_pred ccEEEEecCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCC---HHHHHHH---HHHHhCCCCCHHHHHHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSEVLKTFLVKYGKEWDGREKHKIVGKT---PLEEAAI---IVEDYGLPCAKHEFVNEVYSM 82 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 82 (287)
+|+|+||+||||++. .|.++.++.|.... ...|++ ..+.+.. ++...+. .. ..
T Consensus 2 mkli~fDlDGTLl~e------~~~~~a~~~Gi~~~-----~~tgR~~~~~~~~~~~~v~ll~~~~~--~~--------~~ 60 (206)
T d1rkua_ 2 MEIACLDLEGVLVPE------IWIAFAEKTGIDAL-----KATTRDIPDYDVLMKQRLRILDEHGL--KL--------GD 60 (206)
T ss_dssp CEEEEEESBTTTBCC------HHHHHHHHHTCGGG-----GCCTTTCCCHHHHHHHHHHHHHHTTC--CH--------HH
T ss_pred cEEEEEcCccchHHH------HHHHHHHHcCCHHH-----HHHCCCCCCHHHHHHHHHHHHHhCCC--ce--------eh
Confidence 689999999999984 45666677776431 122221 2222221 1111111 11 11
Q ss_pred HHhhhccCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccC----CcCCCCCCHHHHHHHH
Q 023109 83 FSDHLCKVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSD----EVRTGKPSPDIFLEAA 158 (287)
Q Consensus 83 ~~~~~~~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~----~~~~~kp~~~~~~~~~ 158 (287)
+..........++...+...++ .+...+++|.+......... ..++....+....... ......+++......+
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 138 (206)
T d1rkua_ 61 IQEVIATLKPLEGAVEFVDWLR-ERFQVVILSDTFYEFSQPLM-RQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSV 138 (206)
T ss_dssp HHHHHTTCCCCTTHHHHHHHHH-TTSEEEEEEEEEHHHHHHHH-HHTTCCCEEEEEEEECTTSCEEEEECCSSSHHHHHH
T ss_pred hhhhhhhccccchHHHHHHHhh-cCceEEEeccCchHHHHHHH-HHhCCchhhcceeeeecccccccccccchhhHHHHH
Confidence 1222345778889888887765 67899999999888888777 7766654443222111 1122334445667888
Q ss_pred HHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEE-eCCccCcCcccc
Q 023109 159 KRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEV-INSLLDLRPEKW 219 (287)
Q Consensus 159 ~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v-~~~l~el~~~~~ 219 (287)
+.++++++++++|||+.||++|.+.||..+++ +.. ..-.+..++++ ..+..++.+.+.
T Consensus 139 ~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na~--~~v~~~~~~~~~~~~~~d~~~~~~ 197 (206)
T d1rkua_ 139 IAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HAP--ENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp HHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SCC--HHHHHHCTTSCEECSHHHHHHHHH
T ss_pred HHhcccccceEEecCCccCHHHHHhCCccEEE-CCC--HHHHHhCCCceeecCHHHHHHHHH
Confidence 99999999999999999999999999999888 541 22224555664 466777665543
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.52 E-value=1.4e-14 Score=115.41 Aligned_cols=65 Identities=17% Similarity=0.075 Sum_probs=55.1
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCc
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSL 211 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l 211 (287)
.....+++..++.++++++++++++++|||+.||++|++.+|..+++.+. .+..+..|++++++.
T Consensus 147 ~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~NDi~ml~~ag~~vav~na---~~~~k~~A~~v~~~~ 211 (230)
T d1wr8a_ 147 KKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA---PKILKENADYVTKKE 211 (230)
T ss_dssp ECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHTTCSEECSSC
T ss_pred eeCCcCcchhhcccccccccchhheeeeecCccHHHHHHHCCeEEEECCC---CHHHHHhCCEEECCC
Confidence 45678889999999999999999999999999999999999976665433 466778889888764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.44 E-value=2.4e-14 Score=114.20 Aligned_cols=65 Identities=14% Similarity=0.027 Sum_probs=53.0
Q ss_pred CCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 145 RTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 145 ~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
+....++..++.+++.+|++++++++||||.||+.|++.+|..+++.+. .+..+..|++++++..
T Consensus 147 ~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~~a~~~vav~na---~~~~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 147 NRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANA---TDNIKAVSDFVSDYSY 211 (225)
T ss_dssp ETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTSSSEEEECTTS---CHHHHHHCSEECSCCT
T ss_pred CCccchHHHHHHHhhhhccchhheeeecCCcchHHHHHHCCeEEEECCC---cHHHHHhCCEEECCCC
Confidence 3445567889999999999999999999999999999999976665443 4566778888887664
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.41 E-value=3.8e-13 Score=109.96 Aligned_cols=62 Identities=19% Similarity=0.128 Sum_probs=52.2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 149 PSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 149 p~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.|..+++.+++.++++++++++|||+.||++|.+.+|..+++-+. .++.+..+++++++..+
T Consensus 197 ~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am~na---~~~lk~~a~~i~~~~~~ 258 (271)
T d1rkqa_ 197 NKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAVDNA---IPSVKEVANFVTKSNLE 258 (271)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHCSEECCCTTT
T ss_pred CcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEeCCC---CHHHHHhCCEEcCCCCc
Confidence 466788999999999999999999999999999999977766543 56677888888887664
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.41 E-value=4.6e-13 Score=110.25 Aligned_cols=62 Identities=21% Similarity=0.126 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 148 KPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 148 kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++-+. .++.+..|++++++..
T Consensus 212 ~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam~na---~~~~k~~A~~v~~~~~ 273 (285)
T d1nrwa_ 212 ASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNA---REDIKSIADAVTLTND 273 (285)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEECTTC---CHHHHHHCSEECCCGG
T ss_pred chhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEeCCC---CHHHHHhCCEEcCCCC
Confidence 3567889999999999999999999999999999999977766655 5667888899988755
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.30 E-value=1.8e-12 Score=105.83 Aligned_cols=65 Identities=15% Similarity=0.052 Sum_probs=55.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.+-.|..+++.+++.+|++++++++|||+.||++|.+.+|..+++.++ .+..+..|++++++..+
T Consensus 187 ~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~Na---~~~lk~~A~~v~~~~~~ 251 (269)
T d1rlma_ 187 PGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMGNA---AENIKQIARYATDDNNH 251 (269)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECTTC---CHHHHHHCSEECCCGGG
T ss_pred CchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeCCC---CHHHHHhCCEEcCCCCc
Confidence 344577899999999999999999999999999999999987776655 56678888999887553
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.22 E-value=6.1e-12 Score=102.59 Aligned_cols=67 Identities=18% Similarity=0.104 Sum_probs=56.6
Q ss_pred cCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 144 VRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 144 ~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
...+-.|..+++.+++.++++++++++|||+.||++|.+.+|..+++.+. .++.++.|++++++..+
T Consensus 185 ~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~na---~~~~k~~A~~i~~~~~~ 251 (267)
T d1nf2a_ 185 VPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAMENA---IEKVKEASDIVTLTNND 251 (267)
T ss_dssp ECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECTTS---CHHHHHHCSEECCCTTT
T ss_pred cCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeCCC---CHHHHHhCCEEcCCCCc
Confidence 34455678899999999999999999999999999999999977665444 57778899999987765
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.18 E-value=2.2e-11 Score=99.68 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=52.7
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
....+...+..+++.++++++++++|||+.||++|.+.+|..+++.++ .++.+..|++++++-.
T Consensus 204 ~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~~na---~~~~k~~a~~v~~~~~ 267 (283)
T d2b30a1 204 LGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAVANA---TDSAKSHAKCVLPVSH 267 (283)
T ss_dssp TTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEECTTC---CHHHHHHSSEECSSCT
T ss_pred CcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEeCCC---CHHHHHhCCEEECCcC
Confidence 345667889999999999999999999999999999999977665443 5667888888886543
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=99.18 E-value=3.6e-11 Score=97.53 Aligned_cols=65 Identities=14% Similarity=0.134 Sum_probs=54.1
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLD 213 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~e 213 (287)
.+..|..+++.+++++|++++++++|||+.||++|.+.+|..+++.+. .++.+..|++++++..+
T Consensus 183 ~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~na---~~~lk~~A~~vt~~~~~ 247 (260)
T d2rbka1 183 KGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQA---KEDVKAAADYVTAPIDE 247 (260)
T ss_dssp TTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECTTS---CHHHHHHSSEECCCGGG
T ss_pred CCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeCCC---CHHHHHhCCEEeCCCCc
Confidence 445677889999999999999999999999999999999987665544 56677888888877553
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.12 E-value=1.1e-10 Score=89.54 Aligned_cols=95 Identities=16% Similarity=0.288 Sum_probs=75.1
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCC--------hHHH----HHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSH--------RATI----ESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~--------~~~~----~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
+.|++.+.|+.|.+.|+.++++||.+ ...+ +..+ +.++.. ++..++.......||.+..+..+++
T Consensus 51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~-~~l~~~--~~i~~~~~~~~~RKP~~GM~~~~~~ 127 (195)
T d1yj5a1 51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVL-EKLGVP--FQVLVATHAGLNRKPVSGMWDHLQE 127 (195)
T ss_dssp SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHH-HHHTSC--CEEEEECSSSSSSTTSTHHHHHHHH
T ss_pred ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHH-HHcCCC--ccEEEecCccccCCCccHHHHHHHH
Confidence 46999999999999999999999963 2222 2233 444542 4555666677789999999999999
Q ss_pred HcC----CCCCcEEEEeCC-----------------HhhHHHHHHcCCeEE
Q 023109 160 RLN----MEPSSSLVIEDS-----------------VIGVVAGKAAGMEVV 189 (287)
Q Consensus 160 ~l~----~~~~~~l~iGDs-----------------~~Dv~~a~~aG~~~i 189 (287)
..+ ++.++++||||. ..|+..|.++|++..
T Consensus 128 ~~n~~~~id~~~S~~IGD~~gr~~~~~~~~~~~D~S~sD~~fA~N~gikF~ 178 (195)
T d1yj5a1 128 QANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLPFA 178 (195)
T ss_dssp TSSSSCCCCGGGCEEECSCCCBCTTSBTTBCSCCSCCHHHHHHHHHTCCEE
T ss_pred HhcccccCCcCceEEEeCccCccccccccccccCcchhHHHHHHHCCCccc
Confidence 875 788999999994 489999999999865
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.11 E-value=3.9e-11 Score=95.85 Aligned_cols=48 Identities=6% Similarity=-0.120 Sum_probs=40.7
Q ss_pred CCCCCHHHHHHHHHHcC-CCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDIFLEAAKRLN-MEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~-~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
..-.+..++..+++.++ +.++++++|||+.||++|.+.+|..+++.|.
T Consensus 176 ~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~~a~~~va~~Na 224 (243)
T d1wzca1 176 GNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIVGSL 224 (243)
T ss_dssp CSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEESSC
T ss_pred hhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHHcCCcEEEeCCC
Confidence 34456677888888884 8889999999999999999999988888766
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=1.5e-09 Score=83.44 Aligned_cols=96 Identities=13% Similarity=0.106 Sum_probs=68.1
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCc--cccceeeccCCcCCCCCCHHHHHHHHHHcCC
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWN--ESFSVIVGSDEVRTGKPSPDIFLEAAKRLNM 163 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~--~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~ 163 (287)
...+.||+.++++.++++|++++.+||.+... ....+.+.+|+. +.-+.++..+. ....++ +..++..++
T Consensus 84 ~A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~~~-~~K~~r----r~~Ik~y~I 158 (209)
T d2b82a1 84 FSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAGDK-PGQNTK----SQWLQDKNI 158 (209)
T ss_dssp GCEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECCCC-TTCCCS----HHHHHHTTE
T ss_pred ccCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeCCC-CCchHH----HHHHHHcCe
Confidence 35678899999999999999999999985432 334443446764 22334444332 112222 555566665
Q ss_pred CCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 164 EPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 164 ~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+++||+.+|+.+|+++|++++-+..
T Consensus 159 ----~l~~GD~l~Df~aA~eagi~~iRi~r 184 (209)
T d2b82a1 159 ----RIFYGDSDNDITAARDVGARGIRILR 184 (209)
T ss_dssp ----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred ----EEEecCCHHHHhHHHHcCCCceEeec
Confidence 68999999999999999999998866
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.07 E-value=4.5e-10 Score=88.73 Aligned_cols=43 Identities=9% Similarity=-0.041 Sum_probs=33.6
Q ss_pred CCHHHHHHHHH---HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEE
Q 023109 149 PSPDIFLEAAK---RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAV 191 (287)
Q Consensus 149 p~~~~~~~~~~---~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v 191 (287)
.+....+.+++ .+|++++++++|||+.||++|.+.+|..+++-
T Consensus 184 ~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~a~~~vaV~ 229 (232)
T d1xvia_ 184 GKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVK 229 (232)
T ss_dssp CHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEECC
T ss_pred hHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHhCCeEEEEe
Confidence 34445555554 56899999999999999999999999866543
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.95 E-value=3.3e-09 Score=86.55 Aligned_cols=97 Identities=20% Similarity=0.177 Sum_probs=66.9
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeecc-----C---------CcCCCCCCHHHH
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGS-----D---------EVRTGKPSPDIF 154 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~-----~---------~~~~~kp~~~~~ 154 (287)
.++++||+.++++.|++.|++++++|++-...++..+ +++|+...--.+++. + .......+....
T Consensus 133 ~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl-~~lg~~~~ni~I~sN~l~f~~~~~~~~~~~~~i~~~~K~~~~ 211 (291)
T d2bdua1 133 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVI-RQAGVYHSNVKVVSNFMDFDENGVLKGFKGELIHVFNKHDGA 211 (291)
T ss_dssp CCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHH-HHTTCCBTTEEEEEECEEECTTSBEEEECSSCCCTTCHHHHH
T ss_pred CCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH-HHcCCCccCceEEeeEEEEeCCeeEeeccCCccccccCcchh
Confidence 5789999999999999999999999999999999999 777874321123331 1 111111122232
Q ss_pred HHHHH--HcCCCCCcEEEEeCCHhhHHHHHHcCC
Q 023109 155 LEAAK--RLNMEPSSSLVIEDSVIGVVAGKAAGM 186 (287)
Q Consensus 155 ~~~~~--~l~~~~~~~l~iGDs~~Dv~~a~~aG~ 186 (287)
.+... ...-+.++++++|||.+|+.|+..+..
T Consensus 212 ~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~ 245 (291)
T d2bdua1 212 LKNTDYFSQLKDNSNIILLGDSQGDLRMADGVAN 245 (291)
T ss_dssp HTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSC
T ss_pred hhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCcc
Confidence 22222 223356789999999999999987653
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.91 E-value=2.2e-09 Score=85.75 Aligned_cols=48 Identities=21% Similarity=0.147 Sum_probs=41.3
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~ 193 (287)
.+..|..+.+.+++.+|++++++++|||+.||++|.+.+|..+++-+.
T Consensus 159 ~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml~~~~~~vav~na 206 (244)
T d1s2oa1 159 QRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVRNA 206 (244)
T ss_dssp TTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECTTC
T ss_pred CccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHHhhCCcEEEeCCC
Confidence 445567889999999999999999999999999999999977665544
|
| >d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5' nucleotidase-like domain: Cytosolic IMP-GMP specific 5'-nucleotidase species: Legionella pneumophila [TaxId: 446]
Probab=98.82 E-value=5.4e-08 Score=83.16 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=79.5
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhc--------CCccccceeeccCC-----------------c
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQH--------GWNESFSVIVGSDE-----------------V 144 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~--------gl~~~fd~i~~~~~-----------------~ 144 (287)
+...|.+..+|+.+++.|.++.++||++-.+++..+.-.+ .+.++||.|+.... .
T Consensus 184 v~k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~ 263 (458)
T d2bdea1 184 VIREKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPEN 263 (458)
T ss_dssp EECCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTT
T ss_pred hcCChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCC
Confidence 3457889999999999999999999999999887774434 57789999886410 0
Q ss_pred C-------CCCCC---HHHHHHHHHHcCCCCCcEEEEeCCH-hhHHHHH-HcCCeEEEECC
Q 023109 145 R-------TGKPS---PDIFLEAAKRLNMEPSSSLVIEDSV-IGVVAGK-AAGMEVVAVPS 193 (287)
Q Consensus 145 ~-------~~kp~---~~~~~~~~~~l~~~~~~~l~iGDs~-~Dv~~a~-~aG~~~i~v~~ 193 (287)
+ ..+|. ..-.....+.+|....+++||||+. .||...+ ..|+.|++|..
T Consensus 264 g~l~~~~~~~~~~vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~ 324 (458)
T d2bdea1 264 GTMTNVHGPIVPGVYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE 324 (458)
T ss_dssp CCEEECCSCCCSEEEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred CccccCCccccCCccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence 0 01110 1224667788899999999999999 7977765 68999999976
|
| >d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: 5'(3')-deoxyribonucleotidase (dNT-2) domain: 5'(3')-deoxyribonucleotidase (dNT-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.77 E-value=1.9e-08 Score=77.52 Aligned_cols=113 Identities=16% Similarity=0.120 Sum_probs=72.8
Q ss_pred hccCCCCCcHHHHHHHHHHCCC-CEEEEeCCChH------HHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHH
Q 023109 87 LCKVKALPGANRLIKHLSCHGV-PMALASNSHRA------TIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAK 159 (287)
Q Consensus 87 ~~~~~~~~g~~~~l~~l~~~g~-~v~l~T~~~~~------~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~ 159 (287)
+..+++.||+.++++.|++.|. .+.++|+.+.. .-..-+.++++-... +.++.+. .|.
T Consensus 70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~~~~~~~~~~k~~Wl~~~~~~~~~-~~~~~t~----~K~---------- 134 (195)
T d1q92a_ 70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFGPDFL-EQIVLTR----DKT---------- 134 (195)
T ss_dssp TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHCGGGG-GGEEECS----CST----------
T ss_pred HhhCCcccCHHHHHHHHhhccCccceEEccccccCcchHHHHHHHHHHhcCCCCc-cEEEEcc----ccc----------
Confidence 4678999999999999998654 67788876422 112235354443222 2333322 121
Q ss_pred HcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCccc
Q 023109 160 RLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRPEK 218 (287)
Q Consensus 160 ~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~~~ 218 (287)
. +.. -++|+|++..+..+.++|+.+++.+.++.+..........+.+..|..+.+
T Consensus 135 ~--~~~--d~lIDD~p~n~~~~~~~g~~~il~~~~~N~~~~~~~~~~Rv~~W~e~~~~i 189 (195)
T d1q92a_ 135 V--VSA--DLLIDDRPDITGAEPTPSWEHVLFTACHNQHLQLQPPRRRLHSWADDWKAI 189 (195)
T ss_dssp T--SCC--SEEEESCSCCCCSCSSCSSEEEEECCTTTTTCCCCTTCEEECCTTSCHHHH
T ss_pred e--ecC--eEEecCcHHHHHHHhcCCCeEEEECCCcccCCCCCCCceeeCCHHHHHHHH
Confidence 1 112 289999999999999999999999887766543334456677777654443
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.73 E-value=1.5e-08 Score=76.66 Aligned_cols=101 Identities=16% Similarity=0.127 Sum_probs=80.9
Q ss_pred HHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhH
Q 023109 99 LIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGV 178 (287)
Q Consensus 99 ~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv 178 (287)
-+..++..|+.++++|......+.... ..+++.. ++. ..+++...+...++.+++++++++||||..||+
T Consensus 40 gi~~l~~~gi~~~iis~~~~~~v~~~~-~~l~~~~----~~~-----~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl 109 (177)
T d1k1ea_ 40 GIKMLMDADIQVAVLSGRDSPILRRRI-ADLGIKL----FFL-----GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDL 109 (177)
T ss_dssp HHHHHHHTTCEEEEEESCCCHHHHHHH-HHHTCCE----EEE-----SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred HHHHHhhhcEEEEEecCCchhHHHHHH-hhhcccc----ccc-----ccccHHHHHHHHHHHhcCCcceeEEecCCccHH
Confidence 467788899999999999888888888 6666532 221 244566788899999999999999999999999
Q ss_pred HHHHHcCCeEEEECCCCCccccccCCcEEeCCcc
Q 023109 179 VAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLL 212 (287)
Q Consensus 179 ~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~ 212 (287)
++.+.+|..+++.++ .+..+..++++.++-.
T Consensus 110 ~~l~~~g~siap~nA---~~~vk~~A~~Vt~~~G 140 (177)
T d1k1ea_ 110 PAFAACGTSFAVADA---PIYVKNAVDHVLSTHG 140 (177)
T ss_dssp HHHHHSSEEEECTTS---CHHHHTTSSEECSSCT
T ss_pred HHHhhCCeEEEcCCc---cHHHHHhCCEEeCCCC
Confidence 999999977665555 5667888899887743
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.70 E-value=7e-08 Score=69.32 Aligned_cols=104 Identities=13% Similarity=0.158 Sum_probs=73.4
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEEE
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSLV 170 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l~ 170 (287)
+++|++.+.++.|++.|++++++|+.+...+..+. +.+|+. .+++. -.|+-.....+.+... ..+.|
T Consensus 21 ~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia-~~lgI~----~v~~~-------~~p~~k~~~v~~~q~~-~~v~~ 87 (135)
T d2b8ea1 21 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS-RELNLD----LVIAE-------VLPHQKSEEVKKLQAK-EVVAF 87 (135)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHHTCS----EEECS-------CCHHHHHHHHHHHTTT-SCEEE
T ss_pred CCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHH-hhhhhh----hhccc-------cchhHHHHHHHHHHcC-CEEEE
Confidence 57899999999999999999999999999888888 888874 33321 1234444555555543 58999
Q ss_pred EeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 171 IEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 171 iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
+||+.||.++.+.+++...+.+. ....+..+|.++-+
T Consensus 88 vGDg~nD~~aL~~Advgia~~~~---~~~~~~aADivl~~ 124 (135)
T d2b8ea1 88 VGDGINDAPALAQADLGIAVGSG---SDVAVESGDIVLIR 124 (135)
T ss_dssp EECSSSSHHHHHHSSEEEEECCC-----------SEEESS
T ss_pred EeCCCCcHHHHHhCCeeeecCcc---CHHHHHhCCEEEEC
Confidence 99999999999999987665432 23345667777643
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.59 E-value=2.7e-08 Score=77.92 Aligned_cols=61 Identities=11% Similarity=0.076 Sum_probs=42.2
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCCccCcCc
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINSLLDLRP 216 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~l~el~~ 216 (287)
.+-.|..+++.+++ .+++++||||.||+.|.+.+|..+.+.+. . .+..|.+++++..|+.+
T Consensus 156 ~g~~Kg~al~~l~~-----~~~~i~~GDs~ND~~Mf~~~~~~~av~~g-~----~~~~A~~~~~~~~ev~~ 216 (229)
T d1u02a_ 156 PGVNKGSAIRSVRG-----ERPAIIAGDDATDEAAFEANDDALTIKVG-E----GETHAKFHVADYIEMRK 216 (229)
T ss_dssp TTCCHHHHHHHHHT-----TSCEEEEESSHHHHHHHHTTTTSEEEEES-S----SCCCCSEEESSHHHHHH
T ss_pred CCCCHHHHHHHHhc-----cccceeecCCCChHHHHhccCCeEEEEeC-C----CCccCeEEcCCHHHHHH
Confidence 44455556665543 36899999999999999999765544433 1 13567888888877543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.48 E-value=1.4e-07 Score=74.17 Aligned_cols=45 Identities=7% Similarity=-0.185 Sum_probs=34.0
Q ss_pred CCCCCHHHHHHHHHHcCCCCCcEEEEeCCH----hhHHHHHHcCCeEEEECC
Q 023109 146 TGKPSPDIFLEAAKRLNMEPSSSLVIEDSV----IGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 146 ~~kp~~~~~~~~~~~l~~~~~~~l~iGDs~----~Dv~~a~~aG~~~i~v~~ 193 (287)
.+-.|..+++.++ +.+++++++|||+. ||++|.+.+|...+.+.+
T Consensus 182 ~~vsKg~al~~L~---~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~n 230 (244)
T d2fuea1 182 EGWDKRYCLDSLD---QDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVVS 230 (244)
T ss_dssp TTCSTTHHHHHHT---TSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECSS
T ss_pred hhccHHHHHHHHh---cCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcCC
Confidence 3445556666655 46889999999985 999999999976665554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.44 E-value=3.8e-08 Score=77.66 Aligned_cols=44 Identities=9% Similarity=-0.154 Sum_probs=31.8
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEeC----CHhhHHHHHHcCCeEEEECC
Q 023109 147 GKPSPDIFLEAAKRLNMEPSSSLVIED----SVIGVVAGKAAGMEVVAVPS 193 (287)
Q Consensus 147 ~kp~~~~~~~~~~~l~~~~~~~l~iGD----s~~Dv~~a~~aG~~~i~v~~ 193 (287)
+-.|..+++++ ++++++++++||| +.||++|.+.+|...+++++
T Consensus 183 ~vsKg~al~~l---~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~~ 230 (243)
T d2amya1 183 GWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVTA 230 (243)
T ss_dssp TCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECSS
T ss_pred ccCHHHHHHHH---hCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeCC
Confidence 33344444444 4678999999999 66999999999977777765
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.36 E-value=7.3e-07 Score=66.45 Aligned_cols=116 Identities=14% Similarity=0.040 Sum_probs=80.8
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCcccccee----eccCC----------------cCCCCCC
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVI----VGSDE----------------VRTGKPS 150 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i----~~~~~----------------~~~~kp~ 150 (287)
|+++++.+.++.|++.|++++++|+-+...+..+. +.+|+...-+.+ +.+.+ .....-.
T Consensus 20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia-~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~ar~~ 98 (168)
T d1wpga2 20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAIC-RRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVE 98 (168)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHH-HHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHHCCEEESCC
T ss_pred CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHH-HHcCCCCCccccccccccccccchhhHHHHhhhhhhhhhhhccc
Confidence 68899999999999999999999999999998888 888874322111 11000 0112234
Q ss_pred HHHHHHHHHHcCCCCCcEEEEeCCHhhHHHHHHcCCeEEEECCCCCccccccCCcEEeCC
Q 023109 151 PDIFLEAAKRLNMEPSSSLVIEDSVIGVVAGKAAGMEVVAVPSLPKQTHRYTAADEVINS 210 (287)
Q Consensus 151 ~~~~~~~~~~l~~~~~~~l~iGDs~~Dv~~a~~aG~~~i~v~~~~~~~~~~~~a~~v~~~ 210 (287)
|+-...+.+.+.-....+.++||+.||.++.+.|.+...+. .+ ....+..++.++-+
T Consensus 99 p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~g--t~~a~~aAdivl~~ 155 (168)
T d1wpga2 99 PSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SG--TAVAKTASEMVLAD 155 (168)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TS--CHHHHHTCSEEETT
T ss_pred hhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cc--cHHHHHhCCEEEcc
Confidence 45556666666666678999999999999999999766653 21 22334556766543
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.83 E-value=1.7e-05 Score=55.26 Aligned_cols=48 Identities=10% Similarity=0.129 Sum_probs=37.0
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCC---------------hHHHHHHHHhhcCCccccceeec
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSH---------------RATIESKISYQHGWNESFSVIVG 140 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~---------------~~~~~~~l~~~~gl~~~fd~i~~ 140 (287)
..|.+++.+.++.+++.|+.+++.|++. .......| +..|+ .+|.++.
T Consensus 23 ~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL-~~~gI--~Yd~Li~ 85 (124)
T d1xpja_ 23 VLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWL-DKHQV--PYDEILV 85 (124)
T ss_dssp CCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHH-HHTTC--CCSEEEE
T ss_pred cCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHH-HHcCC--CceEEEE
Confidence 4678999999999999999999999884 12344566 66677 3677765
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.60 E-value=0.00016 Score=50.22 Aligned_cols=45 Identities=18% Similarity=0.144 Sum_probs=33.9
Q ss_pred CCCCcHHHHHHHHHHCCCCEEEEeCCChHHHH---HHHHhhcCCcccccee
Q 023109 91 KALPGANRLIKHLSCHGVPMALASNSHRATIE---SKISYQHGWNESFSVI 138 (287)
Q Consensus 91 ~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~---~~l~~~~gl~~~fd~i 138 (287)
.+.+++.+.|+.|+++|+.+++.|++.....+ ..+ ...|+. |+.+
T Consensus 21 kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL-~~~~i~--yd~i 68 (122)
T d2obba1 21 EEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWC-RARGLE--FYAA 68 (122)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHH-HTTTCC--CSEE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHH-HHcCCC--ceeh
Confidence 47889999999999999999999999765533 344 444553 5554
|
| >d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NLI interacting factor-like phosphatase domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.76 E-value=0.00024 Score=53.10 Aligned_cols=84 Identities=11% Similarity=0.104 Sum_probs=63.3
Q ss_pred CCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCccccceeeccCCcCCCCCCHHHHHHHHHHcCCCCCcEE
Q 023109 90 VKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWNESFSVIVGSDEVRTGKPSPDIFLEAAKRLNMEPSSSL 169 (287)
Q Consensus 90 ~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~~~fd~i~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~l 169 (287)
+..+||+.+||+.+.+. +.+++.|++...+++.++ +.+.-...|......+.+....+. +.+-+..+|.+.++++
T Consensus 54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il-~~ldp~~~~~~~~~r~~c~~~~~~---~~KdL~~l~~~l~~vv 128 (181)
T d1ta0a_ 54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVA-DLLDKWGAFRARLFRESCVFHRGN---YVKDLSRLGRDLRRVL 128 (181)
T ss_dssp EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHH-HHHCSSCCEEEEECGGGSEEETTE---EECCGGGSCSCGGGEE
T ss_pred EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHH-HHhccCCceeEEEEeeeeeecCCc---ccccHhhcCCCHHHeE
Confidence 56799999999999887 999999999999999999 777666666666555443322211 2344667788888999
Q ss_pred EEeCCHhhH
Q 023109 170 VIEDSVIGV 178 (287)
Q Consensus 170 ~iGDs~~Dv 178 (287)
.|+|++.-.
T Consensus 129 ivDd~~~~~ 137 (181)
T d1ta0a_ 129 ILDNSPASY 137 (181)
T ss_dssp EECSCGGGG
T ss_pred EEcCChhhh
Confidence 999998643
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.26 E-value=0.31 Score=37.01 Aligned_cols=42 Identities=17% Similarity=0.138 Sum_probs=36.4
Q ss_pred cCCCCCcHHHHHHHHHHCCCCEEEEeCCChHHHHHHHHhhcCCc
Q 023109 89 KVKALPGANRLIKHLSCHGVPMALASNSHRATIESKISYQHGWN 132 (287)
Q Consensus 89 ~~~~~~g~~~~l~~l~~~g~~v~l~T~~~~~~~~~~l~~~~gl~ 132 (287)
.+.+.||+.+.++.+.+. .+.+++|.+-+.++++.. ++.|+.
T Consensus 79 ~~~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~-~~~gfp 120 (308)
T d1y8aa1 79 SAKFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTA-SMIGVR 120 (308)
T ss_dssp HCCBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHH-HHTTCC
T ss_pred ceeecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHH-hhcCCC
Confidence 467899999999999887 899999999999998877 887773
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=90.49 E-value=0.051 Score=39.66 Aligned_cols=17 Identities=35% Similarity=0.544 Sum_probs=15.1
Q ss_pred CCccEEEEecCCccccc
Q 023109 7 KLMSCVILDLDGTLLNT 23 (287)
Q Consensus 7 ~~~k~iifDlDGTL~d~ 23 (287)
..+|+++||+||||+|.
T Consensus 3 ~~ik~~i~DvDGVlTDG 19 (177)
T d1k1ea_ 3 ENIKFVITDVDGVLTDG 19 (177)
T ss_dssp GGCCEEEEECTTTTSCS
T ss_pred ccCeEEEEccCCcccCC
Confidence 56899999999999975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=85.87 E-value=0.29 Score=40.11 Aligned_cols=21 Identities=29% Similarity=0.643 Sum_probs=17.9
Q ss_pred ccEEEEecCCcccccHHHHHH
Q 023109 9 MSCVILDLDGTLLNTDGMFSE 29 (287)
Q Consensus 9 ~k~iifDlDGTL~d~~~~~~~ 29 (287)
+|.|+||+||+|++....+..
T Consensus 1 ~~~i~fd~dGVll~~~~~~D~ 21 (380)
T d1qyia_ 1 MKKILFDVDGVFLSEERCFDV 21 (380)
T ss_dssp CCEEEECSBTTTBCSHHHHHH
T ss_pred CceEEEeCCcEEEcceeecch
Confidence 578999999999999877654
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=85.36 E-value=0.7 Score=34.99 Aligned_cols=47 Identities=23% Similarity=0.403 Sum_probs=33.3
Q ss_pred CCCcHHHHHHHHHHCCCCEEEEeCCC---hHHHHHHHHhhcCCccccceee
Q 023109 92 ALPGANRLIKHLSCHGVPMALASNSH---RATIESKISYQHGWNESFSVIV 139 (287)
Q Consensus 92 ~~~g~~~~l~~l~~~g~~v~l~T~~~---~~~~~~~l~~~~gl~~~fd~i~ 139 (287)
+.|++.++++.++++|++++++||++ +......+ ..+|+.-..+.++
T Consensus 20 ~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l-~~~G~~~~~~~i~ 69 (250)
T d2c4na1 20 AVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRF-ATAGVDVPDSVFY 69 (250)
T ss_dssp ECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHH-HHTTCCCCGGGEE
T ss_pred cCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHH-hhccccccceeEe
Confidence 34688899999999999999999865 34444556 5567654344444
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=81.27 E-value=1.2 Score=33.55 Aligned_cols=47 Identities=13% Similarity=0.372 Sum_probs=31.4
Q ss_pred CcHHHHHHHHHHCCCCEEEEeCCChHH---HHHHHHhhcCCccccceeec
Q 023109 94 PGANRLIKHLSCHGVPMALASNSHRAT---IESKISYQHGWNESFSVIVG 140 (287)
Q Consensus 94 ~g~~~~l~~l~~~g~~v~l~T~~~~~~---~~~~l~~~~gl~~~fd~i~~ 140 (287)
|++.++++++++.|++++++||++... ....+...+++....+.+++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L~~~~~~~~~~~~i~~ 70 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPASLVYT 70 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCCCGGGEEE
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHHhcCCccccccccC
Confidence 577789999999999999999865333 33334344555444455543
|
| >d1nb9a_ b.43.5.1 (A:) Riboflavin kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Reductase/isomerase/elongation factor common domain superfamily: Riboflavin kinase-like family: ATP-dependent riboflavin kinase-like domain: Riboflavin kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=81.11 E-value=0.21 Score=34.93 Aligned_cols=33 Identities=36% Similarity=0.792 Sum_probs=26.9
Q ss_pred CceeeccceeeeccCccccchhHh-HHHh-hccCC
Q 023109 236 PWYIGGPVVKGLGRGSKLICLQRV-IQMS-FQNIP 268 (287)
Q Consensus 236 p~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~ 268 (287)
|+...|.|.+|.+++++.||.||| ++.. .+.+|
T Consensus 4 Py~i~G~Vv~G~~~G~r~LGfPTANl~~~~~~~lp 38 (147)
T d1nb9a_ 4 PYFCRGQVVRGFGRGSKQLGIPTANFPEQVVDNLP 38 (147)
T ss_dssp SEEEEEECBCCSSSCGGGGTCCCEECCHHHHHTSC
T ss_pred CEEEEEEEEeCCccCCCccCcCCcCCcCchhhccc
Confidence 889999999999999999999999 4433 34444
|