Citrus Sinensis ID: 023178

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MTFGSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKSSTIVS
ccccccEEEEEcccccccccccEEEEEccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEccccEEEEEEccCEEccccccccccccHHHHHHHHHcccEEEEccccccccEEHHHHcccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccc
***GSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKE*R***GCGGGWEDLMAACFLKMDEEVTGA****SSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRF*********SGAAEAATMLAELALARGSKHNISVIVVEL*KS*****
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MTFGSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKSSTIVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Protein phosphatase 2C homolog 1 It has a serine and a weak tyrosine phosphatase activity with ratios of serine to tyrosine phosphatase activity as high as 200:1. It is essential for growth or germination at 37 degrees Celsius. May have a role in the heat shock response. Involved in tRNA splicing and cell separation.probableP35182
Probable protein phosphatase 2C 8 probableQ5SN75

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
3.-.-.-Hydrolases.probable
3.1.-.-Acting on ester bonds.probable
3.1.3.-Phosphoric monoester hydrolases.probable
3.1.3.16Phosphoprotein phosphatase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3QN1, chain B
Confidence level:very confident
Coverage over the Query: 7-282
View the alignment between query and template
View the model in PyMOL