Citrus Sinensis ID: 023178

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MTFGSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKSSTIVS
ccccccEEEEEcccccccccccEEEEEccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEccccccccccccHHHHHHHHHcccEEEEccccccccEEHHHHHccccccccccccccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccccEEEEEEccccccccc
cccccEEEEEEEcccccHHHHHHHHHccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccEEEEEEcccccEEEEccccEEEcccccccccccHHHHHHHHHcccEEEEccccEEcEEEEEEHccccHccccEEEcccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEEccccccccc
mtfgslshgfISVIGRRRVMEDAVTVAIggidsydffavydghgganTTAACRERLHLIVAQEVKERRkregcgggwEDLMAACFLKMDEevtgagrdassvgpsaLVVMVDEEELVVANRGNSRIVLCRagvavplsrdhkpdkpdeseRVRVEAAgggitnwygCRVLGVLttsasigdqnlkpyvvlskpevtvnARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTgqlrlrfpeecsgsgpsgAAEAATMLAELALARGSKHNISVIVVELKKSSTIVS
mtfgslshgfisvigrrrVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVkerrkregcgggwEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVvanrgnsrivlcragvavplsrdhkpdkpdeserVRVEAagggitnwyGCRVLGVLTTsasigdqnlkpyVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVelkksstivs
MTFGSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQevkerrkregcgggweDLMAACFLKMDEEVTGAGRDASSVGPSAlvvmvdeeelvvANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFpeecsgsgpsgaaeaatmlaelalaRGSKHNISVIVVELKKSSTIVS
*****LSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREGCGGGWEDLMAACFLKMDEEVTGA******VGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVP*****************VEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFP****************MLAELALARGSKHNISVIVVEL********
***GSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKE*R***GC*GGWEDLMAACFLKMDEEVTGA****SSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRF******SGPSGAAEAATMLAELALARGSKHNISVIVVEL*KS*****
MTFGSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEV********CGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSR*************RVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFP*************AATMLAELALARGSKHNISVIVVELKKSSTIVS
***GSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQL*************SGAAEAATMLAELALARGSKHNISVIVVELKK******
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MTFGSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKSSTIVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query286 2.2.26 [Sep-21-2011]
Q5SN75403 Probable protein phosphat yes no 0.940 0.667 0.506 9e-74
Q65XK7381 Probable protein phosphat no no 0.940 0.706 0.519 1e-64
Q0J2L7358 Probable protein phosphat no no 0.909 0.726 0.465 5e-58
Q9LNW3442 Protein phosphatase 2C 3 yes no 0.926 0.599 0.408 6e-56
Q9ZW21362 Probable protein phosphat no no 0.940 0.743 0.434 4e-54
Q5N9N2414 Probable protein phosphat no no 0.930 0.642 0.406 3e-52
Q9FLI3416 Probable protein phosphat no no 0.951 0.653 0.412 5e-51
P49597434 Protein phosphatase 2C 56 no no 0.930 0.612 0.401 8e-51
Q9FIF5413 Probable protein phosphat no no 0.762 0.527 0.461 2e-50
P49598399 Protein phosphatase 2C 37 no no 0.758 0.543 0.454 3e-50
>sp|Q5SN75|P2C08_ORYSJ Probable protein phosphatase 2C 8 OS=Oryza sativa subsp. japonica GN=Os01g0656200 PE=2 SV=1 Back     alignment and function desciption
 Score =  276 bits (707), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 156/308 (50%), Positives = 206/308 (66%), Gaps = 39/308 (12%)

Query: 6   LSHGFISVIGRRRVMEDAVTVAIGGIDSYD--------------------FFAVYDGHGG 45
           +SHG +SVIGRRR MEDA+ VA   + +                      FFAVYDGHGG
Sbjct: 89  VSHGAVSVIGRRREMEDAIFVAAPFLAASKEAAVEGSGVAEEEGKEEDEGFFAVYDGHGG 148

Query: 46  ANTTAACRERLHLIVAQEVKERRKREGCG----------GGWEDLMAACFLKMDEEVTGA 95
           +    ACRER+H+++A+EV+ RR  +G G            W++ MAACF ++D EV GA
Sbjct: 149 SRVAEACRERMHVVLAEEVRVRRLLQGGGGGADVEDEDRARWKEAMAACFTRVDGEVGGA 208

Query: 96  GRDAS---SVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERV 152
               +   +VG +A+V +V    +VVAN G+SR VL R GVAVPLS DHKPD+PDE ERV
Sbjct: 209 EEADTGEQTVGSTAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERV 268

Query: 153 RVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATR 212
             EAAGG + NW G R+LGVL TS SIGD  LKPYV+ ++PEVTV  R++ DEF+++A+ 
Sbjct: 269 --EAAGGRVINWNGYRILGVLATSRSIGDYYLKPYVI-AEPEVTVMDRTDKDEFLILASD 325

Query: 213 GLWDVVSNEFACEVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNIS 272
           GLWDVVSN+ AC++ R CL+G+   ++PE  SG   S AA+AA +L ELA++RGSK NIS
Sbjct: 326 GLWDVVSNDVACKIARNCLSGRAASKYPESVSG---STAADAAALLVELAISRGSKDNIS 382

Query: 273 VIVVELKK 280
           V+VVEL++
Sbjct: 383 VVVVELRR 390

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q65XK7|P2C51_ORYSJ Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1 Back     alignment and function description
>sp|Q0J2L7|P2C68_ORYSJ Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2 Back     alignment and function description
>sp|Q9LNW3|P2C03_ARATH Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZW21|P2C24_ARATH Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1 Back     alignment and function description
>sp|Q5N9N2|P2C09_ORYSJ Probable protein phosphatase 2C 9 OS=Oryza sativa subsp. japonica GN=Os01g0846300 PE=2 SV=1 Back     alignment and function description
>sp|Q9FLI3|P2C75_ARATH Probable protein phosphatase 2C 75 OS=Arabidopsis thaliana GN=AHG1 PE=2 SV=1 Back     alignment and function description
>sp|P49597|P2C56_ARATH Protein phosphatase 2C 56 OS=Arabidopsis thaliana GN=ABI1 PE=1 SV=2 Back     alignment and function description
>sp|Q9FIF5|P2C78_ARATH Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1 Back     alignment and function description
>sp|P49598|P2C37_ARATH Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
359473923 650 PREDICTED: uncharacterized protein LOC10 0.937 0.412 0.612 1e-84
225426354 393 PREDICTED: probable protein phosphatase 0.937 0.681 0.598 2e-84
255545018352 protein phosphatase 2c, putative [Ricinu 0.933 0.758 0.602 1e-78
356539358336 PREDICTED: probable protein phosphatase 0.944 0.803 0.585 1e-74
356495717324 PREDICTED: probable protein phosphatase 0.947 0.836 0.576 3e-74
357135769 392 PREDICTED: probable protein phosphatase 0.940 0.686 0.530 3e-74
326533450 398 predicted protein [Hordeum vulgare subsp 0.940 0.675 0.516 2e-73
357481429354 Protein phosphatase 2C [Medicago truncat 0.944 0.762 0.567 3e-73
115438949 403 Os01g0656200 [Oryza sativa Japonica Grou 0.940 0.667 0.506 5e-72
357128446 495 PREDICTED: probable protein phosphatase 0.940 0.543 0.514 6e-71
>gi|359473923|ref|XP_002265635.2| PREDICTED: uncharacterized protein LOC100241034 [Vitis vinifera] Back     alignment and taxonomy information
 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 174/284 (61%), Positives = 212/284 (74%), Gaps = 16/284 (5%)

Query: 6   LSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQEVK 65
           + HG +SVIGRRR MED +TVA G ++ YDF+AVYDGHGG     ACR RLH +VA+EV+
Sbjct: 247 IPHGSVSVIGRRRAMEDTLTVAPGELELYDFYAVYDGHGGDQVAHACRNRLHKLVAKEVE 306

Query: 66  ERRKREGCGGGWEDLMAACFLKMDEEVT-----GAGRDASSV----GPSALVVMVDEEEL 116
            RR  EG G  WE++MAA F KMDEE+       A R ASS+    G +A+VV+V  E+L
Sbjct: 307 HRRDGEG-GIHWENVMAASFSKMDEEINVEASEMADRSASSLLRSMGSTAVVVVVGAEKL 365

Query: 117 VVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTS 176
           V+AN G+SR VLC  GVAVPLSRDHKPD+PDE E  RVEAAGG + NW G RVLGVL+ S
Sbjct: 366 VIANCGDSRAVLCCNGVAVPLSRDHKPDRPDERE--RVEAAGGNVINWDGFRVLGVLSIS 423

Query: 177 ASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLR 236
            SIGD  L+PYV+ S+PEVTV  R E DEF+VIAT GLWDVV+NE AC++V+R L+G++R
Sbjct: 424 RSIGDYFLRPYVI-SEPEVTVWERKESDEFLVIATDGLWDVVTNELACKLVKRYLSGKIR 482

Query: 237 LRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKK 280
            RF E   G+  S A EAA++L ELA+ARGSK NISVIVV+LKK
Sbjct: 483 RRFSE---GTNASCAMEAASILTELAMARGSKDNISVIVVQLKK 523

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225426354|ref|XP_002266149.1| PREDICTED: probable protein phosphatase 2C 8 [Vitis vinifera] gi|297742328|emb|CBI34477.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255545018|ref|XP_002513570.1| protein phosphatase 2c, putative [Ricinus communis] gi|223547478|gb|EEF48973.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356539358|ref|XP_003538165.1| PREDICTED: probable protein phosphatase 2C 8-like [Glycine max] Back     alignment and taxonomy information
>gi|356495717|ref|XP_003516720.1| PREDICTED: probable protein phosphatase 2C 8-like [Glycine max] Back     alignment and taxonomy information
>gi|357135769|ref|XP_003569481.1| PREDICTED: probable protein phosphatase 2C 8-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|326533450|dbj|BAK05256.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|357481429|ref|XP_003611000.1| Protein phosphatase 2C [Medicago truncatula] gi|355512335|gb|AES93958.1| Protein phosphatase 2C [Medicago truncatula] Back     alignment and taxonomy information
>gi|115438949|ref|NP_001043754.1| Os01g0656200 [Oryza sativa Japonica Group] gi|75286811|sp|Q5SN75.1|P2C08_ORYSJ RecName: Full=Probable protein phosphatase 2C 8; Short=OsPP2C08 gi|55773943|dbj|BAD72331.1| protein phosphatase 2C-like [Oryza sativa Japonica Group] gi|113533285|dbj|BAF05668.1| Os01g0656200 [Oryza sativa Japonica Group] gi|215686965|dbj|BAG90835.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|357128446|ref|XP_003565884.1| PREDICTED: probable protein phosphatase 2C 8-like [Brachypodium distachyon] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query286
TAIR|locus:2025087442 HAI2 "highly ABA-induced PP2C 0.755 0.488 0.439 1.4e-44
TAIR|locus:2168449413 HAI1 "highly ABA-induced PP2C 0.762 0.527 0.437 1.4e-44
TAIR|locus:2080787399 PP2CA "protein phosphatase 2CA 0.604 0.433 0.438 4.7e-44
TAIR|locus:2165371416 AHG1 "ABA-hypersensitive germi 0.639 0.439 0.417 4.6e-40
TAIR|locus:2005488434 ABI1 "ABA INSENSITIVE 1" [Arab 0.933 0.615 0.356 8.9e-38
TAIR|locus:2043142362 HAI3 "highly ABA-induced PP2C 0.828 0.654 0.389 2.4e-37
TAIR|locus:2164610423 ABI2 "AT5G57050" [Arabidopsis 0.849 0.574 0.346 1e-36
TAIR|locus:2007943511 HAB2 "homology to ABI2" [Arabi 0.664 0.371 0.382 2.4e-36
TAIR|locus:2030230511 HAB1 "AT1G72770" [Arabidopsis 0.513 0.287 0.445 7.6e-33
TAIR|locus:2029172371 AT1G43900 [Arabidopsis thalian 0.730 0.563 0.383 3.8e-31
TAIR|locus:2025087 HAI2 "highly ABA-induced PP2C gene 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 446 (162.1 bits), Expect = 1.4e-44, Sum P(2) = 1.4e-44
 Identities = 108/246 (43%), Positives = 137/246 (55%)

Query:     8 HGFISVIGRRRVMEDAVTVAIGGIDS--------YDFFAVYDGHGGANTTAACRERLHLI 59
             +G  SV GRRR MEDAV +    +          + +F VYDGHG ++  A C+ERLH +
Sbjct:   121 YGVASVCGRRRDMEDAVALHPSFVRKQTEFSRTRWHYFGVYDGHGCSHVAARCKERLHEL 180

Query:    60 VAQXXXXXXXXXXXXXXXXDLMAACFLKMDEEVTGAGR--------------DASSVGPS 105
             V +                 +M   F +MD+EV   G               D  +VG +
Sbjct:   181 VQEEALSDKKEEWKK-----MMERSFTRMDKEVVRWGETVMSANCRCELQTPDCDAVGST 235

Query:   106 AXXXXXXXXXXXXANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWY 165
             A            AN G+SR VLCR G AVPLS DHKPD+PDE +R+  + AGG +  W 
Sbjct:   236 AVVSVITPEKIIVANCGDSRAVLCRNGKAVPLSTDHKPDRPDELDRI--QEAGGRVIYWD 293

Query:   166 GCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACE 225
             G RVLGVL  S +IGD  LKPYV  S+PEVTV  R+E DEF+++AT GLWDVV+NE AC 
Sbjct:   294 GARVLGVLAMSRAIGDNYLKPYVT-SEPEVTVTDRTEEDEFLILATDGLWDVVTNEAACT 352

Query:   226 VVRRCL 231
             +VR CL
Sbjct:   353 MVRMCL 358
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0005886 "plasma membrane" evidence=ISM
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA
TAIR|locus:2168449 HAI1 "highly ABA-induced PP2C gene 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080787 PP2CA "protein phosphatase 2CA" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165371 AHG1 "ABA-hypersensitive germination 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2005488 ABI1 "ABA INSENSITIVE 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2043142 HAI3 "highly ABA-induced PP2C gene 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164610 ABI2 "AT5G57050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2007943 HAB2 "homology to ABI2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2030230 HAB1 "AT1G72770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029172 AT1G43900 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q5SN75P2C08_ORYSJ3, ., 1, ., 3, ., 1, 60.50640.94050.6674yesno
P35182PP2C1_YEAST3, ., 1, ., 3, ., 1, 60.32610.81460.8291yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.160.824
3rd Layer3.1.30.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 3e-67
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 5e-64
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-47
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 9e-30
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-27
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-26
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score =  209 bits (534), Expect = 3e-67
 Identities = 112/273 (41%), Positives = 155/273 (56%), Gaps = 27/273 (9%)

Query: 4   GSLSHGFISVIGRRRVMEDAVTVAIGGIDSYDFFAVYDGHGGANTTAACRERLHLIVAQE 63
             L +G  S+ G R+ MEDA  +     DS  FF V+DGHGG+       + L  I+A+E
Sbjct: 7   LGLRYGLSSMQGVRKPMEDAHVITPDLSDSGGFFGVFDGHGGSEAAKFLSKNLPEILAEE 66

Query: 64  VKERRKREGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSALVVMVDEEELVVANRGN 123
           +    K +      E+ +   FL  DEE+       S  G +A+V ++   +L VAN G+
Sbjct: 67  L---IKEKDELEDVEEALRKAFLSTDEEILEELEALS--GSTAVVALISGNKLYVANVGD 121

Query: 124 SRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQN 183
           SR VLCR G AV L+ DHKP   +E ER R+EAAGG + N    RV GVL  S +IGD  
Sbjct: 122 SRAVLCRNGKAVQLTEDHKPS--NEDERARIEAAGGFVING---RVNGVLALSRAIGDFF 176

Query: 184 LKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEEC 243
           LKPYV  ++P+VTV   +E D+F+++A+ GLWDV+SN+   ++VR+ L+           
Sbjct: 177 LKPYVS-AEPDVTVVELTEKDDFLILASDGLWDVLSNQEVVDIVRKHLSKDP-------- 227

Query: 244 SGSGPSGAAEAATMLAELALARGSKHNISVIVV 276
                    EAA  L +LALARGSK NI+V+VV
Sbjct: 228 --------KEAAKRLIDLALARGSKDNITVVVV 252

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 286
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.96
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.94
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.93
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.88
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.8
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.67
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.52
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.61
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7e-52  Score=370.24  Aligned_cols=253  Identities=30%  Similarity=0.490  Sum_probs=218.8

Q ss_pred             cCCeeeEEeecccCCCCCCceeEeeccCC----------CCeeEEEEecCCCchHHHHHHHHHHHHHHHHHHHHhhhcCC
Q 023178            3 FGSLSHGFISVIGRRRVMEDAVTVAIGGI----------DSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRKREG   72 (286)
Q Consensus         3 ~~~~~~~~~s~~G~r~~neD~~~~~~~~~----------~~~~l~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~~~~~   72 (286)
                      ++.|+++.+|++|.|+.|||++++..++.          ....+|+|||||||+.+|++|++.+++.+.+...       
T Consensus        62 ~~~~~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~age~as~~l~~~i~~~~~-------  134 (365)
T PLN03145         62 IPVVRSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKHAADFACYHLPRFIVEDED-------  134 (365)
T ss_pred             cCceEEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHhhhc-------
Confidence            46789999999999999999998755321          2367999999999999999999999998876321       


Q ss_pred             CCCCHHHHHHHHHHHhhHHHHhcCC--CCCCCCCeEEEEEEeCceEEEEEeccceEEEEeCCeEEEcCCCCCCCChhhhH
Q 023178           73 CGGGWEDLMAACFLKMDEEVTGAGR--DASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESE  150 (286)
Q Consensus        73 ~~~~~~~~l~~~~~~~~~~l~~~~~--~~~~~gsT~~~~~i~~~~l~~a~vGDsr~~l~~~g~~~~lt~dh~~~~~~e~~  150 (286)
                      ....+.++|.++|.++++.+.....  ....+|||++++++.++.+|+||+||||+|++++|++++||.||++.++.|+.
T Consensus       135 ~~~~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTavv~li~~~~l~vaNvGDSRayl~r~g~~~~LT~DH~~~~~~E~~  214 (365)
T PLN03145        135 FPREIEKVVSSAFLQTDTAFAEACSLDASLASGTTALAALVVGRSLVVANAGDCRAVLCRRGKAIEMSRDHKPMCSKERK  214 (365)
T ss_pred             cchhHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEEEEEEECCeEEEEecCCceEEEEcCCeEEEecCCCCCCCHHHHH
Confidence            2346788999999999999876542  33469999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHhcCCeEEeecCceecceeecccccCCCCCCCC------ccccCceEEEEEcCCCCeEEEEEcCCCcCCCCHHHHH
Q 023178          151 RVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPY------VVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFAC  224 (286)
Q Consensus       151 ~~ri~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~k~~------~v~~~p~i~~~~l~~~~~~lll~SDGv~d~l~~~ei~  224 (286)
                        |++..||.+..   .++.|.+.+||+|||..+|..      .++++|++..+++.++|+|||||||||||+|+++++.
T Consensus       215 --RI~~~Gg~v~~---g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~D~fLILaSDGLwdvls~ee~v  289 (365)
T PLN03145        215 --RIEASGGYVYD---GYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEEDEFLIIGCDGIWDVFRSQNAV  289 (365)
T ss_pred             --HHHHcCCceec---ceECCccccccccccccccccccccCCCcceEEEEEEEECCCCCEEEEEeCCccccCcCHHHHH
Confidence              99999998864   678888999999999877632      2478999999999988999999999999999999999


Q ss_pred             HHHHHhhhccccccCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCC
Q 023178          225 EVVRRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKS  281 (286)
Q Consensus       225 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~  281 (286)
                      +++++.+..              ..+++++|+.|++.|+.+++.||+|+|||+|++.
T Consensus       290 ~~i~~~l~~--------------~~~p~~aa~~Lv~~Al~rgs~DNITvIVV~l~~~  332 (365)
T PLN03145        290 DFARRRLQE--------------HNDPVMCSKELVDEALKRKSGDNLAVVVVCFQSQ  332 (365)
T ss_pred             HHHHHHHhc--------------CCCHHHHHHHHHHHHHhCCCCCCEEEEEEEeecC
Confidence            888765431              2578999999999999999999999999999863

>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-41
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 6e-41
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 8e-41
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-36
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 5e-36
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 6e-36
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 7e-36
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 8e-36
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 8e-36
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 9e-36
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-22
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 2e-22
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-22
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 9e-18
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 3e-17
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-17
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 5e-06
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 7e-05
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 1e-04
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 3e-04
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure 
Iteration: 1

 Score =  164 bits (415), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/307 (34%), Positives = 149/307 (48%), Gaps = 33/307 (10%)
Query: 8   HGFISVIGRRRVMEDAVTVAIGGIDS---------YD------FFAVYDGHGGANTTAAC 52
           +GF S+ GRR  MEDAV+     + S         +D      FF VYDGHGG+     C
Sbjct: 14  YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 73
Query: 53  RERLHLIVAQXXXXXXXXX----XXXXXXXDLMAACFLKMDEEVTGAGRDASSVGPSAXX 108
           RER+HL +A+                      +   FL++D E+     +  +VG ++  
Sbjct: 74  RERMHLALAEEIAKEKPMLCDGDTWLEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVV 131
Query: 109 XXXXXXXXXXANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCR 168
                     AN G+SR VLCR   A+PLS DHKPD+ DE+   R+EAAGG +  W G R
Sbjct: 132 AVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEA--ARIEAAGGKVIQWNGAR 189
Query: 169 VLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEVVR 228
           V GVL  S SIGD+ LKP ++   PEVT   R + D+ +++A+ G+WDV+++E ACE+ R
Sbjct: 190 VFGVLAMSRSIGDRYLKPSII-PDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMAR 248
Query: 229 R---------CLTGQLRLRFXXXXXXXXXXXXXXXXXXXXXXXXXRGSKHNISVIVVELK 279
           +          + G   L                           RGSK NISV+VV+LK
Sbjct: 249 KRILLWHKKNAVAGDASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLK 308
Query: 280 KSSTIVS 286
               + S
Sbjct: 309 PRRKLKS 315
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query286
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 6e-89
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-83
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-80
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-79
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-79
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 4e-79
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 2e-76
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 8e-75
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 5e-64
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 1e-57
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 4e-53
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 7e-51
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-30
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 7e-06
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-08
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-08
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 8e-08
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 9e-08
3rnr_A211 Stage II sporulation E family protein; structural 5e-04
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
 Score =  266 bits (682), Expect = 6e-89
 Identities = 113/309 (36%), Positives = 164/309 (53%), Gaps = 33/309 (10%)

Query: 6   LSHGFISVIGRRRVMEDAVTV---------------AIGGIDSYDFFAVYDGHGGANTTA 50
             +GF S+ GRR  MEDAV+                      +  FF VYDGHGG+    
Sbjct: 9   PLYGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVAN 68

Query: 51  ACRERLHLIVAQEVKERRKR----EGCGGGWEDLMAACFLKMDEEVTGAGRDASSVGPSA 106
            CRER+HL +A+E+ + +      +     W+  +   FL++D E+     +    G ++
Sbjct: 69  YCRERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETV--GSTS 126

Query: 107 LVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYG 166
           +V +V    + VAN G+SR VLCR   A+PLS DHKPD+ D  E  R+EAAGG +  W G
Sbjct: 127 VVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDRED--EAARIEAAGGKVIQWNG 184

Query: 167 CRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDEFIVIATRGLWDVVSNEFACEV 226
            RV GVL  S SIGD+ LKP ++   PEVT   R + D+ +++A+ G+WDV+++E ACE+
Sbjct: 185 ARVFGVLAMSRSIGDRYLKPSII-PDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEM 243

Query: 227 VRRCLTGQLRLRFPEE---------CSGSGPSGAAEAATMLAELALARGSKHNISVIVVE 277
            R+ +    +                       A  AA  L++LA+ RGSK NISV+VV+
Sbjct: 244 ARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVD 303

Query: 278 LKKSSTIVS 286
           LK    + S
Sbjct: 304 LKPRRKLKS 312
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.88
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.86
3f79_A255 Probable two-component response regulator; adaptor 99.8
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.77
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.4
3eq2_A394 Probable two-component response regulator; adaptor 98.61
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=9.7e-53  Score=375.58  Aligned_cols=276  Identities=42%  Similarity=0.695  Sum_probs=230.3

Q ss_pred             eeEEeecccCCCCCCceeEeeccCC--------------------CCeeEEEEecCCCchHHHHHHHHHHHHHHHHHHHH
Q 023178            7 SHGFISVIGRRRVMEDAVTVAIGGI--------------------DSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKE   66 (286)
Q Consensus         7 ~~~~~s~~G~r~~neD~~~~~~~~~--------------------~~~~l~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~   66 (286)
                      .||.+|++|+|.+|||++++...+.                    .+..+|+|||||||+.++++|++.+++.|.+.+..
T Consensus        15 ~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~~~l~~~~~~   94 (337)
T 3qn1_B           15 LWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLHFALAEEIER   94 (337)
T ss_dssp             CEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHHHHHHHHHHh
Confidence            5899999999999999999865421                    25789999999999999999999999999998876


Q ss_pred             hhhc-------CCCCCCHHHHHHHHHHHhhHHHHhcCC--------------CCCCCCCeEEEEEEeCceEEEEEeccce
Q 023178           67 RRKR-------EGCGGGWEDLMAACFLKMDEEVTGAGR--------------DASSVGPSALVVMVDEEELVVANRGNSR  125 (286)
Q Consensus        67 ~~~~-------~~~~~~~~~~l~~~~~~~~~~l~~~~~--------------~~~~~gsT~~~~~i~~~~l~~a~vGDsr  125 (286)
                      ....       ......+.++|+++|.++++.+.....              ....+|||++++++.++++|+||+||||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR  174 (337)
T 3qn1_B           95 IKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSR  174 (337)
T ss_dssp             TC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCE
T ss_pred             hhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcE
Confidence            4311       122346789999999999999987651              3457999999999999999999999999


Q ss_pred             EEEEeCCeEEEcCCCCCCCChhhhHHHHHHhcCCeEEeecCceecceeecccccCCCCCCCCccccCceEEEEEcCCCCe
Q 023178          126 IVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSASIGDQNLKPYVVLSKPEVTVNARSELDE  205 (286)
Q Consensus       126 ~~l~~~g~~~~lt~dh~~~~~~e~~~~ri~~~gg~~~~~~~~~~~~~~~~tr~lG~~~~k~~~v~~~p~i~~~~l~~~~~  205 (286)
                      +|++|+|++++||.||++.++.|+.  |+...||.+..+...|+.+.+.+||+||+..+||.+ +++|++..+++.+.++
T Consensus       175 ~~l~r~g~~~~lT~DH~~~~~~e~~--ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v-~~~pdv~~~~~~~~~d  251 (337)
T 3qn1_B          175 AVLFRGKEAMPLSVDHKPDREDEYA--RIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYV-IPEPEVTFMPRSREDE  251 (337)
T ss_dssp             EEEEETTEEEESCCCCCTTSHHHHH--HHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTS-BCCCEEEEEECCTTEE
T ss_pred             EEEEeCCEeeeecCCCCCCCHHHHH--HHHHcCCeEEecCCceecCccccccccccccccCCC-CCcceEEEEEeCCCCC
Confidence            9999999999999999999999999  999999999999999999999999999999999987 8999999999987799


Q ss_pred             EEEEEcCCCcCCCCHHHHHHHHHHhhhccccccCCCCC---CCCCCCcHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCCC
Q 023178          206 FIVIATRGLWDVVSNEFACEVVRRCLTGQLRLRFPEEC---SGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKSS  282 (286)
Q Consensus       206 ~lll~SDGv~d~l~~~ei~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~  282 (286)
                      |||||||||||+++++|+.++++..+..+..+......   ......+++.+|+.|++.|+.+|+.||+|||||++..+.
T Consensus       252 ~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~~  331 (337)
T 3qn1_B          252 CLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQR  331 (337)
T ss_dssp             EEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCSCC
T ss_pred             EEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecCCc
Confidence            99999999999999999999998643211100000000   000124678999999999999999999999999998876


Q ss_pred             CCC
Q 023178          283 TIV  285 (286)
Q Consensus       283 ~~~  285 (286)
                      ..+
T Consensus       332 ~~~  334 (337)
T 3qn1_B          332 KFK  334 (337)
T ss_dssp             ---
T ss_pred             ccc
Confidence            543
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 286
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-41
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 5e-23
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (358), Expect = 2e-41
 Identities = 84/290 (28%), Positives = 129/290 (44%), Gaps = 35/290 (12%)

Query: 6   LSHGFISVIGRRRVMEDAVTVAIG---GIDSYDFFAVYDGHGGANTTAACRERLH-LIVA 61
           L +G  S+ G R  MEDA T  IG   G++S+ FFAVYDGH G+     C E L   I  
Sbjct: 21  LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITN 80

Query: 62  QEVKERRKREGCGGGWEDLMAACFLKMDEEVTGAGR---DASSVGPSALVVMVDEEELVV 118
            +  +           ++ +   FL++DE +         A   G +A+ V++  +    
Sbjct: 81  NQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYF 140

Query: 119 ANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEAAGGGITNWYGCRVLGVLTTSAS 178
            N G+SR +LCR       ++DHKP  P E  + R++ AGG   +    RV G L  S +
Sbjct: 141 INCGDSRGLLCRNRKVHFFTQDHKPSNPLE--KERIQNAGG---SVMIQRVNGSLAVSRA 195

Query: 179 IGDQNLKPYVVLSKPEVTVNAR---------SELDEFIVIATRGLWDVVSNEFACEVVRR 229
           +GD + K        E  V+            E D+FI++A  G+WDV+ NE  C+ VR 
Sbjct: 196 LGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRS 255

Query: 230 CLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELK 279
            L                     +    + +  L +GS+ N+SVI++   
Sbjct: 256 RLEVT--------------DDLEKVCNEVVDTCLYKGSRDNMSVILICFP 291
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query286
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-55  Score=380.30  Aligned_cols=260  Identities=33%  Similarity=0.516  Sum_probs=226.9

Q ss_pred             CCeeeEEeecccCCCCCCceeEeeccCC---CCeeEEEEecCCCchHHHHHHHHHHHHHHHHHHHHhhh-cCCCCCCHHH
Q 023178            4 GSLSHGFISVIGRRRVMEDAVTVAIGGI---DSYDFFAVYDGHGGANTTAACRERLHLIVAQEVKERRK-REGCGGGWED   79 (286)
Q Consensus         4 ~~~~~~~~s~~G~r~~neD~~~~~~~~~---~~~~l~~V~DG~gG~~~~~~a~~~~~~~l~~~~~~~~~-~~~~~~~~~~   79 (286)
                      ++++||+++++|+|++|||++.+.....   +++.||||||||||+.+++++++.+++.|.+.+..... ......++.+
T Consensus        19 ~~~~~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~   98 (295)
T d1a6qa2          19 NGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKN   98 (295)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHH
T ss_pred             CceEEEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHH
Confidence            5789999999999999999998875432   46789999999999999999999999999877654331 1122235788


Q ss_pred             HHHHHHHHhhHHHHhcCC---CCCCCCCeEEEEEEeCceEEEEEeccceEEEEeCCeEEEcCCCCCCCChhhhHHHHHHh
Q 023178           80 LMAACFLKMDEEVTGAGR---DASSVGPSALVVMVDEEELVVANRGNSRIVLCRAGVAVPLSRDHKPDKPDESERVRVEA  156 (286)
Q Consensus        80 ~l~~~~~~~~~~l~~~~~---~~~~~gsT~~~~~i~~~~l~~a~vGDsr~~l~~~g~~~~lt~dh~~~~~~e~~~~ri~~  156 (286)
                      +|+++|.++++.+.....   ....+|||++++++.++++|+||+||||+|++++|.+++||.||++.++.|+.  |+..
T Consensus        99 al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~--Ri~~  176 (295)
T d1a6qa2          99 GIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKE--RIQN  176 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHH--HHHH
T ss_pred             HHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHh--hHhh
Confidence            999999999988865432   56679999999999999999999999999999999999999999999999999  9999


Q ss_pred             cCCeEEeecCceecceeecccccCCCCCCCC--------ccccCceEEEEEcC-CCCeEEEEEcCCCcCCCCHHHHHHHH
Q 023178          157 AGGGITNWYGCRVLGVLTTSASIGDQNLKPY--------VVLSKPEVTVNARS-ELDEFIVIATRGLWDVVSNEFACEVV  227 (286)
Q Consensus       157 ~gg~~~~~~~~~~~~~~~~tr~lG~~~~k~~--------~v~~~p~i~~~~l~-~~~~~lll~SDGv~d~l~~~ei~~i~  227 (286)
                      .||.+..   .|+.|.+.+||+|||..+|+.        .|+++|++..+++. +.++|||||||||||+|+++|+.+++
T Consensus       177 ~gg~v~~---~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v  253 (295)
T d1a6qa2         177 AGGSVMI---QRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFV  253 (295)
T ss_dssp             TTCCEET---TEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHH
T ss_pred             cCCcccc---cccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHHH
Confidence            9999875   789999999999999988743        35999999999986 55779999999999999999999999


Q ss_pred             HHhhhccccccCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCCC
Q 023178          228 RRCLTGQLRLRFPEECSGSGPSGAAEAATMLAELALARGSKHNISVIVVELKKSS  282 (286)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~a~~~g~~DNiTvivv~~~~~~  282 (286)
                      +..+.              ...+++.+|+.|++.|+.+++.||+|||||+|++.|
T Consensus       254 ~~~~~--------------~~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~~  294 (295)
T d1a6qa2         254 RSRLE--------------VTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAP  294 (295)
T ss_dssp             HHHHT--------------TCCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSC
T ss_pred             HHHhh--------------cCCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCCC
Confidence            87654              247899999999999999999999999999999876
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure