Citrus Sinensis ID: 023190

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Secondary Structure (PSIPRED)
ccHHHHHHHHHccccccccccccccEEcccccccccccccccccccEEEEccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccccccccEEEEEEccccccccccccccccccEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHccccccccEEEEEEEcccccccccHHccccccEEEEEcccccccccccccccccccccEEccccccccccccEEEEEEEEEEEcccccccccccEEEEEEEEcccccccccccccccccEEEEEEEEccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccHHHHHHHccccc
Coil and Loop (DISEMBL)
MRSSLCTICAvnafrsqspfrlspksiftnlipwdlpdlalygekewyfftprdrkypngsrpnraagsgywkatgadkpigqpkpvgIKKALVFYagkapkgektnWIMHEYRLAdvdrsarkknslrlDDWVLCRIYnkkgsiekqqqvtnrrpnfteteteteekkpvvmpsgmdtstsggallpnpastvtgtgtvndymyfdtsdsvpklntdsscsehvvspeftcevqsepkmqpwentlgfpynyldsamdisfnsqlqgnnqlsplqdmfmyftkpf
Flexible Loop (DISEMBL)
MRSSLCTICAvnafrsqspfrlspkSIFTNLIPWDLPDLALYGEKEWYfftprdrkypngsrpnraagsgywkatgadkpigqpkpVGIKKALVFYAGkapkgektnwiMHEYRladvdrsarkknslrlddwvLCRIYnkkgsiekqqqvtnrrpnfteteteteekkpvvmpsGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Low Complexity Region (SEG)
MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFteteteteeKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Disordered region (IsUnstruct)
****LCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPR*****************YWKA**********KPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNK******************************************************GTGTVNDYMYFD**********************************PWENTLGFPYNYLDSAMDISFN**************MFMYF****
Disordered Region (DISOPRED)
MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLA***************DWVLCRIYN***************************************************************MYF*********************************************NYLD******************PLQDMFMYFTKP*
Disordered Region (DISEMBL)
MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSI*************************VVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVP*************SPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Disordered Region (DISPRO)
MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS***KNSLRLDDWVLCRIYNKKG*******************************************************TVNDYM**DTSDSVP*LNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q39013	289	NAC domain-containing pro	yes	no	0.779	0.771	0.621	1e-84
Q7F2L3	303	NAC domain-containing pro	yes	no	0.863	0.815	0.6	1e-78
Q9C598	283	Protein ATAF2 OS=Arabidop	no	no	0.660	0.667	0.555	1e-59
Q8H115	312	NAC domain-containing pro	no	no	0.562	0.516	0.552	7e-58
Q53NF7	329	NAC domain-containing pro	no	no	0.856	0.744	0.465	1e-55
Q52QH4	318	NAC domain-containing pro	no	no	0.506	0.455	0.624	4e-48
Q93VY3	297	NAC domain-containing pro	no	no	0.405	0.390	0.735	7e-44
Q9C932	317	NAC domain-containing pro	no	no	0.395	0.356	0.717	8e-44
Q9LDY8	317	NAC domain-containing pro	no	no	0.493	0.444	0.610	9e-44
A0SPJ6	396	NAC transcription factor	N/A	no	0.409	0.295	0.632	2e-41

>sp|Q39013|NAC2_ARATH NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2

 Score =  313 bits (802), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 169/272 (62%), Positives = 192/272 (70%), Gaps = 49/272 (18%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PW+LP LALYGEKEWYFF+PRDRKYPNGSRPNR+AGSGYWKATGADKPIG PKPVGIKKA
Sbjct: 49  PWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSAR-KKNSLRLDDWVLCRIYNKKGSIEKQ--- 148
           LVFYAGKAPKGEKTNWIMHEYRLADVDRS R KKNSLRLDDWVLCRIYNKKG+ E++   
Sbjct: 109 LVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERRGPP 168

Query: 149 ------QQVTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVND 202
                  ++   +P  TE          +VMP             P P  T       ++
Sbjct: 169 PPVVYGDEIMEEKPKVTE----------MVMP-------------PPPQQT-------SE 198

Query: 203 YMYFDTSDSVPKLN-TDSSCSEHVVSPEFTCEVQSEPKMQPWE-------NTLGFPYNYL 254
           + YFDTSDSVPKL+ TDSSCSE VVSPEFT EVQSEPK + W        NTL F +NY+
Sbjct: 199 FAYFDTSDSVPKLHTTDSSCSEQVVSPEFTSEVQSEPKWKDWSAVSNDNNNTLDFGFNYI 258

Query: 255 DSAMDISFNSQLQGNNQLSPLQDMFMYFTKPF 286
           D+ +D +F      +NQ+ PLQDMFMY  KP+
Sbjct: 259 DATVDNAFGGG-GSSNQMFPLQDMFMYMQKPY 289

Arabidopsis thaliana (taxid: 3702)

>sp|Q7F2L3|NAC48_ORYSJ NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1

 Score =  293 bits (750), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 156/260 (60%), Positives = 180/260 (69%), Gaps = 13/260 (5%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PW LP +ALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKP+G PKPV IKKA
Sbjct: 51  PWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPVGSPKPVAIKKA 110

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
           LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG +EK     
Sbjct: 111 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGGLEKPPAAA 170

Query: 153 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDT-SDS 211
                   +     ++KP+V   G++ + S     P     V G    +   Y+D  SDS
Sbjct: 171 VAAAGMVSSGGGV-QRKPMV---GVNAAVSSP---PEQKPVVAGPAFPDLAAYYDRPSDS 223

Query: 212 VPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGF--PYNYLDSAMDISFNSQLQGN 269
           +P+L+ DSSCSE V+SPEF CEVQS+PK+  WE T     P N   S +D + +  L G 
Sbjct: 224 MPRLHADSSCSEQVLSPEFACEVQSQPKISEWERTFATVGPINPAASILDPAGSGGLGGL 283

Query: 270 NQLSP---LQDMFMYFTKPF 286
                   LQD+ MY+ KPF
Sbjct: 284 GGGGSDPLLQDILMYWGKPF 303

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9C598|NAC81_ARATH Protein ATAF2 OS=Arabidopsis thaliana GN=NAC081 PE=1 SV=1

 Score =  229 bits (585), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/236 (55%), Positives = 149/236 (63%), Gaps = 47/236 (19%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PW+LP+++LYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKA
Sbjct: 49  PWELPEMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKQQQ 150
           LVFYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK   
Sbjct: 109 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEK--- 165

Query: 151 VTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSD 210
                                                P      T T        FDTSD
Sbjct: 166 -----------------------------------YFPADEKPRTTTMAEQSSSPFDTSD 190

Query: 211 SV-PKLNTDSSCSE----HVVSPEFTCEVQSEPKMQPWENTL-GFPYNYLDSAMDI 260
           S  P L  D S S     HVVSP+   EVQSEPK    E+ L  F  +   S+M++
Sbjct: 191 STYPTLQEDDSSSSGGHGHVVSPD-VLEVQSEPKWGELEDALEAFDTSMFGSSMEL 245

Arabidopsis thaliana (taxid: 3702)

>sp|Q8H115|NA102_ARATH NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=1 SV=1

 Score =  224 bits (570), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 122/221 (55%), Positives = 139/221 (62%), Gaps = 60/221 (27%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PW+LP++ALYGEKEWYFF+ RDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKA
Sbjct: 92  PWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKA 151

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKQQQ 150
           LVFYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK   
Sbjct: 152 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEK--- 208

Query: 151 VTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSD 210
                                               LP  A   T   + +D        
Sbjct: 209 -----------------------------------YLPAAAEKPTEKMSTSD-------- 225

Query: 211 SVPKLNTDSSCSEHVVSPEFTC----EVQSEPKMQPWENTL 247
                   S CS HV+SP+ TC    EV+SEPK    E+ L
Sbjct: 226 --------SRCSSHVISPDVTCSDNWEVESEPKWINLEDAL 258

May be involved in regulation of seed germination under flooding.

Arabidopsis thaliana (taxid: 3702)

>sp|Q53NF7|NAC71_ORYSJ NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1

 Score =  216 bits (551), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/288 (46%), Positives = 161/288 (55%), Gaps = 43/288 (14%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP+ A+ GEKEWYFF+PRDRKYPNG RPNRAAG+GYWKATGADKP+G P+ V IKKA
Sbjct: 51  PWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPVGSPRAVAIKKA 110

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKK-------NSLRLDDWVLCRIYNKKGSI 145
           LVFYAGK PKG KTNWIMHEYRLADVDRSA  +       N+LRLDDWVLCRIYNKKG I
Sbjct: 111 LVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHNALRLDDWVLCRIYNKKGVI 170

Query: 146 EKQQQV---TNRRPNFTETETETEEKKPVVMPSGMDTSTSG-GALLPNPASTVTGTGTVN 201
           E+   V    + +P       +          + M    S  G     P S +       
Sbjct: 171 ERYDTVDAGEDVKPAAAAAAAKGGRIGGGGGAAAMKVELSDYGFYDQEPESEM------- 223

Query: 202 DYMYFDTS-----DSVPKLNTDSSCSEHVVSPEFTCE------VQSEPKMQPWENTLGFP 250
             + FD S     DS+P+L+TDSS SEHV+SP  + +           + QP     G+P
Sbjct: 224 --LCFDRSGSADRDSMPRLHTDSSGSEHVLSPSPSPDDFPGGGDHDYAESQPSGGCGGWP 281

Query: 251 YNYLDSAMDISF--NSQL----------QGNNQLSPLQDMFMYFTKPF 286
                +  D  F  +S L          +     +   DMF Y  KPF
Sbjct: 282 GVDWAAVGDDGFVIDSSLFELPSPAAFSRAAGDGAAFGDMFTYLQKPF 329

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q52QH4|NAC68_ORYSJ NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1

 Score =  191 bits (486), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 98/157 (62%), Positives = 113/157 (71%), Gaps = 12/157 (7%)

Query: 5   LCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPN 64
           LC   A    R   P  +  +     L PWDLP+ AL+G KEWYFFTPRDRKYPNGSRPN
Sbjct: 39  LCRKVA----RQPLPVPIIAEVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPN 94

Query: 65  RAAGSGYWKATGADKPI---GQPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRS 121
           RAAG GYWKATGADKP+   G  + VGIKKALVFY+GKAP+G KT+WIMHEYRLAD DR+
Sbjct: 95  RAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRA 154

Query: 122 -ARKKNSLRLDDWVLCRIYNKKGSIEK----QQQVTN 153
              KK S +LD+WVLCR+YNKK + EK    QQ V +
Sbjct: 155 PGGKKGSQKLDEWVLCRLYNKKNNWEKVKLEQQDVAS 191

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q93VY3|NAC72_ARATH NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1

 Score =  177 bits (449), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 89/121 (73%), Positives = 96/121 (79%), Gaps = 5/121 (4%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKK 91
           PWDLP  AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKK
Sbjct: 56  PWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKK 115

Query: 92  ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQV 151
           ALVFYAGKAPKG KTNWIMHEYRL +  RS     S +LDDWVLCRIY KK S  ++Q V
Sbjct: 116 ALVFYAGKAPKGTKTNWIMHEYRLIEHSRS---HGSSKLDDWVLCRIY-KKTSGSQRQAV 171

Query: 152 T 152
           T
Sbjct: 172 T 172

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C932|NAC19_ARATH NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1

 Score =  177 bits (449), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 84/117 (71%), Positives = 95/117 (81%), Gaps = 4/117 (3%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKK 91
           PW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKK
Sbjct: 56  PWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKK 115

Query: 92  ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 148
           ALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct: 116 ALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQ 169

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LDY8|NAC55_ARATH NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1

 Score =  177 bits (449), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 91/149 (61%), Positives = 103/149 (69%), Gaps = 8/149 (5%)

Query: 1   MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNG 60
           M   LC   A + F  Q    L  +       PW LP  AL+GEKEWYFF+PRDRKYPNG
Sbjct: 28  MVEYLCRKAAGHDFSLQ----LIAEIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNG 83

Query: 61  SRPNRAAGSGYWKATGADKPIG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVD 119
           SRPNR AGSGYWKATG DK I  + + VGIKKALVFY GKAPKG KTNWIMHEYRL +  
Sbjct: 84  SRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIE-- 141

Query: 120 RSARKKNSLRLDDWVLCRIYNKKGSIEKQ 148
             +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct: 142 -PSRRNGSTKLDDWVLCRIYKKQTSAQKQ 169

Transcription factors that bind specifically to the 5'-CATGTG-3' motif.

Arabidopsis thaliana (taxid: 3702)

>sp|A0SPJ6|NAMB2_TRIDB NAC transcription factor NAM-B2 OS=Triticum durum GN=NAM-B2 PE=2 SV=1

 Score =  169 bits (429), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/136 (63%), Positives = 97/136 (71%), Gaps = 19/136 (13%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GQPKPV 87
           PW+LP+ A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKPI     G+ K V
Sbjct: 70  PWELPEKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILASGCGREK-V 128

Query: 88  GIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSA-----------RKKNSLRLDDWVLC 136
           G+KKALVFY GK PKG KTNWIMHEYRL D   SA            +  SLRLDDWVLC
Sbjct: 129 GVKKALVFYRGKPPKGLKTNWIMHEYRLTDASSSATTSRPPPVTGGSRSASLRLDDWVLC 188

Query: 137 RIYNK--KGSIEKQQQ 150
           RIY K  K +   QQ+
Sbjct: 189 RIYKKINKAAAGDQQR 204

Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene encoding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1.

Triticum durum (taxid: 4567)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
224063050	291	NAC domain protein, IPR003441 [Populus t	0.835	0.821	0.750	1e-106
255558632	369	NAC domain-containing protein, putative	0.839	0.650	0.735	1e-106
333696916	291	nam-like protein [Corylus heterophylla]	0.849	0.835	0.720	1e-102
427199350	294	nac family transcription factor 5 [Morel	0.856	0.833	0.729	1e-102
206584339	299	NAC domain protein NAC2 [Gossypium hirsu	0.846	0.809	0.721	1e-101
224084914	279	NAC domain protein, IPR003441 [Populus t	0.800	0.820	0.721	1e-101
242877145	291	NAC family transcription factor 5 [Cicer	0.842	0.828	0.710	1e-100
359806256	300	NAC domain-containing protein 2-like [Gl	0.867	0.826	0.693	3e-97
206584343	298	NAC domain protein NAC3 [Gossypium hirsu	0.821	0.788	0.695	6e-95
351726451	299	NAC domain protein NAC2 [Glycine max] gi	0.853	0.816	0.694	2e-94

>gi|224063050|ref|XP_002300972.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222842698|gb|EEE80245.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  391 bits (1005), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/257 (75%), Positives = 214/257 (83%), Gaps = 18/257 (7%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP +ALYGEKEWYFFTPRDRKYPNGSRPNRAAG GYWKATGADKPIGQPK VGIKKA
Sbjct: 50  PWDLPGIALYGEKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPIGQPKTVGIKKA 109

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQ-V 151
           LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG++EKQ+Q +
Sbjct: 110 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTVEKQEQHL 169

Query: 152 TNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDS 211
           + ++ N   TE E +EKK VV             LLP P +  + TGTVNDYMYFDTSDS
Sbjct: 170 SVKKAN--PTEIEEDEKKQVV-------------LLPPPQAPSSATGTVNDYMYFDTSDS 214

Query: 212 VPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENT--LGFPYNYLDSAMDISFNSQLQGN 269
           VP+++TDSSCSEHVVSPEFTCEVQSEP+ + W N   L  PYNYLD+ MDI F SQLQG+
Sbjct: 215 VPRMHTDSSCSEHVVSPEFTCEVQSEPRWKEWGNVNALDNPYNYLDATMDIPFASQLQGD 274

Query: 270 NQLSPLQDMFMYFTKPF 286
           NQ+SPLQD+FM+  KPF
Sbjct: 275 NQMSPLQDIFMHLQKPF 291

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255558632|ref|XP_002520341.1| NAC domain-containing protein, putative [Ricinus communis] gi|223540560|gb|EEF42127.1| NAC domain-containing protein, putative [Ricinus communis]

 Score =  389 bits (1000), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/257 (73%), Positives = 211/257 (82%), Gaps = 17/257 (6%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP +ALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA
Sbjct: 127 PWDLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 186

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
           LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+IEKQ Q++
Sbjct: 187 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTIEKQGQLS 246

Query: 153 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 212
           N++          E+KKP +M              P PA + +GTGT ND++YF++SDSV
Sbjct: 247 NKKIINYSPSNIIEDKKPEIM-------------APPPAPS-SGTGTANDFVYFESSDSV 292

Query: 213 PKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWE---NTLGFPYNYLDSAMDISFNSQLQGN 269
           PKL+TDSSCSEHVVSPEFTCEVQSEPK + W    N L FP+NY+D +MD +F SQ Q N
Sbjct: 293 PKLHTDSSCSEHVVSPEFTCEVQSEPKWKDWGSNVNALDFPFNYMDGSMDSAFASQFQNN 352

Query: 270 NQLSPLQDMFMYFTKPF 286
           NQ+SPLQDMFMY  KPF
Sbjct: 353 NQMSPLQDMFMYLQKPF 369

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|333696916|gb|AEF80001.1| nam-like protein [Corylus heterophylla]

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/254 (72%), Positives = 210/254 (82%), Gaps = 11/254 (4%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PW+LP +ALYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG PK +GIKKA
Sbjct: 49  PWELPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKAMGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
           LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+ EKQQQ  
Sbjct: 109 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTTEKQQQGI 168

Query: 153 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 212
           N +     +++E E+KKP  +  G  TS    A+L  PA+T T  G  +DY+YFDTSDSV
Sbjct: 169 NLQ---KMSDSEMEDKKPENLTIGGATS----AILSGPAATRTAAG--DDYVYFDTSDSV 219

Query: 213 PKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQL 272
           P+L+TDSSCSEHVVSPEFTCEVQSEPK   WE T+ + +NY+D+ +D  F +Q Q +NQ+
Sbjct: 220 PRLHTDSSCSEHVVSPEFTCEVQSEPKC--WEKTIDYHFNYMDATLDNGFGAQFQSSNQM 277

Query: 273 SPLQDMFMYFTKPF 286
           SPLQDMFMY  KPF
Sbjct: 278 SPLQDMFMYMQKPF 291

Source: Corylus heterophylla

Species: Corylus heterophylla

Genus: Corylus

Family: Betulaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|427199350|gb|AFY26893.1| nac family transcription factor 5 [Morella rubra]

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/255 (72%), Positives = 203/255 (79%), Gaps = 10/255 (3%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PW+LP +ALYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG PK VGIKKA
Sbjct: 49  PWELPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKAVGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK-QQQV 151
           LVFYAGKAP+GEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+IEK QQQ+
Sbjct: 109 LVFYAGKAPRGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGTIEKQQQQI 168

Query: 152 TNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDS 211
            NRR N      ETEEKKP ++ +G  T             +      VNDY YFDTSDS
Sbjct: 169 INRRMN----SFETEEKKPEILTNGGTTPAPLLPAP---PPSAVPKAAVNDYTYFDTSDS 221

Query: 212 VPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQ 271
           VP+L+TDSSCSEHVVSPEFTCEVQSEPK   WE  + F +NY+D+  D  F SQ Q NNQ
Sbjct: 222 VPRLHTDSSCSEHVVSPEFTCEVQSEPKY--WEKPMDFSFNYMDATFDNGFGSQFQSNNQ 279

Query: 272 LSPLQDMFMYFTKPF 286
           LSPLQDMFMY  KPF
Sbjct: 280 LSPLQDMFMYLQKPF 294

Source: Morella rubra

Species: Morella rubra

Genus: Morella

Family: Myricaceae

Order: Fagales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|206584339|gb|ACI15342.1| NAC domain protein NAC2 [Gossypium hirsutum] gi|206584351|gb|ACI15348.1| NAC domain protein NAC2 [Gossypium hirsutum]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 189/262 (72%), Positives = 207/262 (79%), Gaps = 20/262 (7%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLPDLALYGE+EWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA
Sbjct: 50  PWDLPDLALYGEEEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 109

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
           LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKG+IEKQ    
Sbjct: 110 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGAIEKQSPQG 169

Query: 153 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 212
           +     +   TE E+KKP +   G+DT       LP P      TG  NDY+YFDTS+SV
Sbjct: 170 SI--GKSSAVTEIEDKKPDIATLGVDTRQ-----LPPPP-----TGLGNDYVYFDTSESV 217

Query: 213 PKLNTDSSCSEHVVSPEFTCEVQSEPKMQPW--------ENTLGFPYNYLDSAMDISFNS 264
           P+L+TDSSCSEHVVSPEFTCEVQSEP+ + W         N L FPYNY+D+ +D  F +
Sbjct: 218 PRLHTDSSCSEHVVSPEFTCEVQSEPQWKDWGSATNTTTTNALDFPYNYMDATVDNGFPA 277

Query: 265 QLQGNNQLSPLQDMFMYFTKPF 286
             Q NNQLSPLQDMFMY  KPF
Sbjct: 278 HFQSNNQLSPLQDMFMYLQKPF 299

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224084914|ref|XP_002307447.1| NAC domain protein, IPR003441 [Populus trichocarpa] gi|222856896|gb|EEE94443.1| NAC domain protein, IPR003441 [Populus trichocarpa]

 Score =  373 bits (958), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 184/255 (72%), Positives = 201/255 (78%), Gaps = 26/255 (10%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP +ALYGEKEWYFFTPRDRKYPNGSRPNRAAG GYWKATGADKPIGQPK  GIKKA
Sbjct: 50  PWDLPGMALYGEKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPIGQPKTAGIKKA 109

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ-QQV 151
           LVFYAGKAPKGEKTNWIMHEYRLA+VDRS RKKNSLRLDDWVLCRI+NKKG+IEKQ Q +
Sbjct: 110 LVFYAGKAPKGEKTNWIMHEYRLAEVDRSVRKKNSLRLDDWVLCRIHNKKGTIEKQGQHL 169

Query: 152 TNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDS 211
           + ++ N +    E +EKK VVM             LP P    + TGTVNDY+YFDTSDS
Sbjct: 170 SVQKANSSTEIAEEDEKKSVVM-------------LPPPPGPSSATGTVNDYVYFDTSDS 216

Query: 212 VPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQ 271
           VP+L+TDSSCSEHVVSPEFTCEVQS             PYNYLD+ MDI F SQ QGN+Q
Sbjct: 217 VPRLHTDSSCSEHVVSPEFTCEVQSN------------PYNYLDATMDIPFASQFQGNHQ 264

Query: 272 LSPLQDMFMYFTKPF 286
           +SPLQDMFMY  KPF
Sbjct: 265 MSPLQDMFMYLQKPF 279

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242877145|gb|ACS94038.1| NAC family transcription factor 5 [Cicer arietinum]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/256 (71%), Positives = 202/256 (78%), Gaps = 15/256 (5%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP +A YGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIG PKPVGIKKA
Sbjct: 49  PWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ--QQ 150
           LVFYAGKAPKG+KTNWIMHEYRLADVDRS R+KNSLRLDDWVLCRIYNKKG+IEKQ    
Sbjct: 109 LVFYAGKAPKGDKTNWIMHEYRLADVDRSIRRKNSLRLDDWVLCRIYNKKGTIEKQPNSG 168

Query: 151 VTNRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSD 210
           V NR+ +     +E E+KKP ++       T G  L P+P      T  + DYMYFDTSD
Sbjct: 169 VINRKTD----PSEIEDKKPEIL-------TRGSGLPPHPPP--QATAGMRDYMYFDTSD 215

Query: 211 SVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNN 270
           S+PKL+TDSSCSEHVVSPEF  EVQSEPK   WE  L FPYNY+D+ ++  F SQ Q NN
Sbjct: 216 SIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKHLEFPYNYVDTTLNSGFGSQFQSNN 275

Query: 271 QLSPLQDMFMYFTKPF 286
           Q+SPLQDMFMY  K F
Sbjct: 276 QMSPLQDMFMYLPKTF 291

Source: Cicer arietinum

Species: Cicer arietinum

Genus: Cicer

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359806256|ref|NP_001240958.1| NAC domain-containing protein 2-like [Glycine max] gi|187940277|gb|ACD39369.1| NAC domain protein [Glycine max]

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 179/258 (69%), Positives = 204/258 (79%), Gaps = 10/258 (3%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP LA YGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG PKPVGIKKA
Sbjct: 49  PWDLPGLASYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGHPKPVGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
           LVFYAGKAPKG+K+NWIMHEYRLADVDRS RKKNSLRLDDWVLCRIYNKKG+IEK Q  +
Sbjct: 109 LVFYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGTIEKFQPSS 168

Query: 153 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTSDSV 212
           +   +     +E E++KP ++ SG      GG LLP             DYMYFD SDS+
Sbjct: 169 DVVVSRKMESSEIEDRKPEILKSG------GGCLLPPVPPPQAKAAVKKDYMYFDPSDSI 222

Query: 213 PKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMD--ISFNSQLQGNN 270
           PKL+TDSSCSEHVVSPEF  EVQSEPK + WE +L FP+NY+D+ ++   SF +Q QGNN
Sbjct: 223 PKLHTDSSCSEHVVSPEFASEVQSEPKWKEWEKSLEFPFNYVDATLNNSNSFTTQFQGNN 282

Query: 271 Q-LSPLQDMFMYF-TKPF 286
           Q +SPLQDMFMY+  KPF
Sbjct: 283 QMMSPLQDMFMYWPNKPF 300

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|206584343|gb|ACI15344.1| NAC domain protein NAC3 [Gossypium hirsutum] gi|206584353|gb|ACI15349.1| NAC domain protein NAC3 [Gossypium hirsutum]

 Score =  353 bits (905), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 185/266 (69%), Positives = 201/266 (75%), Gaps = 31/266 (11%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLPDLALYGEKEWYFF+PRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA
Sbjct: 52  PWDLPDLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 111

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ---Q 149
           LVFY+GKAPKGEKTNWIMHEYRLADVDRS RKKNSLRLDDWVLCRIYNKKG IEKQ    
Sbjct: 112 LVFYSGKAPKGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGCIEKQPPRG 171

Query: 150 QVTNRRPNFTETETETEEKKPVVMPSGMDTSTSG-GALLPNPASTVTGTGTVNDYMYFDT 208
            VT +      + TE EE KP       D  T G  A    PA+T  G    NDY+YFD+
Sbjct: 172 SVTKK-----ASVTEIEESKP-------DNGTLGVEACEFPPAATAVG----NDYVYFDS 215

Query: 209 SDSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLG--------FPYNYLDSAMDI 260
           S+SVP+++TDSSCSEH VS EF  EVQS PK   W+  LG        F YNYLD+ MDI
Sbjct: 216 SESVPRVHTDSSCSEHAVSREFMTEVQSVPK---WKEELGMANNNALDFAYNYLDTNMDI 272

Query: 261 SFNSQLQGNNQLSPLQDMFMYFTKPF 286
            F SQ+Q +NQLSP QD+FMY  KPF
Sbjct: 273 GFASQMQSSNQLSPYQDIFMYLQKPF 298

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726451|ref|NP_001236871.1| NAC domain protein NAC2 [Glycine max] gi|62546185|gb|AAX85979.1| NAC2 protein [Glycine max] gi|66394512|gb|AAY46122.1| NAC domain protein NAC2 [Glycine max]

 Score =  351 bits (901), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 175/252 (69%), Positives = 199/252 (78%), Gaps = 8/252 (3%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
           PWDLP LA YGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIGQPKPVGIKKA
Sbjct: 49  PWDLPGLATYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGQPKPVGIKKA 108

Query: 93  LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
           LVFYAGKAPKG+K+NWIMHEYRLADVDRS RKKN+LRLDDWVLCRIYNKKG+IEK Q  +
Sbjct: 109 LVFYAGKAPKGDKSNWIMHEYRLADVDRSVRKKNTLRLDDWVLCRIYNKKGTIEKLQPSS 168

Query: 153 NRRPNFTETETETEEKKPVVMPSGMDTSTSGGALLPNPASTVTGTGTVN-DYMYFDTSDS 211
           +   +     +E E++KP ++ SG      GG L P          T   DYMYFD SDS
Sbjct: 169 DVAHSRNIESSEIEDRKPEILKSG------GGCLPPPAPVPAPPQATAKTDYMYFDPSDS 222

Query: 212 VPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQLQGNNQ 271
           +PKL+TDSSCSE VVSP F  EVQSEPK   WE +L FP+NY+D+ ++ SF +Q QGNNQ
Sbjct: 223 IPKLHTDSSCSEQVVSPGFASEVQSEPKWNEWEKSLEFPFNYVDATLNNSFMAQFQGNNQ 282

Query: 272 -LSPLQDMFMYF 282
            LSPLQDMFMY+
Sbjct: 283 MLSPLQDMFMYW 294

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2204685	253	NAC032 "NAC domain containing	0.409	0.462	0.905	1.6e-67
TAIR|locus:2198225	289	ATAF1 [Arabidopsis thaliana (t	0.405	0.401	0.905	2.2e-57
TAIR|locus:504956335	283	ATAF2 [Arabidopsis thaliana (t	0.737	0.745	0.526	2e-56
TAIR|locus:2160634	312	NAC102 "NAC domain containing	0.496	0.455	0.715	1.3e-54
TAIR|locus:2011531	317	NAC019 "NAC domain containing	0.395	0.356	0.717	4.5e-43
TAIR|locus:2090176	317	NAC3 "NAC domain containing pr	0.395	0.356	0.717	5.7e-43
TAIR|locus:2011516	320	NAM "NO APICAL MERISTEM" [Arab	0.391	0.35	0.672	3.6e-41
TAIR|locus:2008490	323	NAC025 "NAC domain containing	0.391	0.346	0.666	6.8e-40
TAIR|locus:2124014	314	RD26 "RESPONSIVE TO DESICCATIO	0.381	0.347	0.736	8.7e-40
TAIR|locus:2090186	364	NAC2 "NAC domain containing pr	0.388	0.304	0.653	1.8e-39

TAIR|locus:2204685 NAC032 "NAC domain containing protein 32" [Arabidopsis thaliana (taxid:3702)]

 Score = 604 (217.7 bits), Expect = 1.6e-67, Sum P(2) = 1.6e-67
 Identities = 106/117 (90%), Positives = 113/117 (96%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
             PWDLPD+ALYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PKPVGIKKA
Sbjct:    52 PWDLPDMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGRPKPVGIKKA 111

Query:    93 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQ 149
             LVFY+GK P GEKTNWIMHEYRLADVDRS RKKNSLRLDDWVLCRIYNKKG IEK++
Sbjct:   112 LVFYSGKPPNGEKTNWIMHEYRLADVDRSVRKKNSLRLDDWVLCRIYNKKGVIEKRR 168

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

TAIR|locus:2198225 ATAF1 [Arabidopsis thaliana (taxid:3702)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 106/117 (90%), Positives = 112/117 (95%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
             PW+LP LALYGEKEWYFF+PRDRKYPNGSRPNR+AGSGYWKATGADKPIG PKPVGIKKA
Sbjct:    49 PWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPIGLPKPVGIKKA 108

Query:    93 LVFYAGKAPKGEKTNWIMHEYRLADVDRSARKK-NSLRLDDWVLCRIYNKKGSIEKQ 148
             LVFYAGKAPKGEKTNWIMHEYRLADVDRS RKK NSLRLDDWVLCRIYNKKG+ E++
Sbjct:   109 LVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATERR 165

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP;RCA

GO:0009788 "negative regulation of abscisic acid mediated signaling pathway" evidence=IMP

GO:0009414 "response to water deprivation" evidence=RCA

GO:0009620 "response to fungus" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:504956335 ATAF2 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 121/230 (52%), Positives = 152/230 (66%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
             PW+LP+++LYGEKEWYFF+PRDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKA
Sbjct:    49 PWELPEMSLYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKA 108

Query:    93 LVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEK--- 147
             LVFYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK   
Sbjct:   109 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASVNKKNNLRLDDWVLCRIYNKKGTMEKYFP 168

Query:   148 ---QQQVTNRRPNFXXXXXXXXXKKPVVMPSGMDTSTSGG---ALLPNPASTVTGT--GT 199
                + + T                 P +     D+S+SGG    + P+     +    G 
Sbjct:   169 ADEKPRTTTMAEQSSSPFDTSDSTYPTLQED--DSSSSGGHGHVVSPDVLEVQSEPKWGE 226

Query:   200 VNDYMY-FDTS---DSVPKLNTDSSCSEHVVSPEFTCEVQSEPKMQPWEN 245
             + D +  FDTS    S+  L  D+   + +   ++    Q  P+ +P+ N
Sbjct:   227 LEDALEAFDTSMFGSSMELLQPDAFVPQFLYQSDYFTSFQDPPEQKPFLN 276

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:0008361 "regulation of cell size" evidence=IMP

GO:0009416 "response to light stimulus" evidence=IEP

GO:0009620 "response to fungus" evidence=IMP

GO:0009744 "response to sucrose stimulus" evidence=IEP

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0009753 "response to jasmonic acid stimulus" evidence=IEP

GO:0043424 "protein histidine kinase binding" evidence=IPI

TAIR|locus:2160634 NAC102 "NAC domain containing protein 102" [Arabidopsis thaliana (taxid:3702)]

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 103/144 (71%), Positives = 116/144 (80%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIGQPKPVGIKKA 92
             PW+LP++ALYGEKEWYFF+ RDRKYPNGSRPNRAAG+GYWKATGADKPIG+PK +GIKKA
Sbjct:    92 PWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPIGKPKTLGIKKA 151

Query:    93 LVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIEKQQQ 150
             LVFYAGKAPKG KTNWIMHEYRLA+VDRSA   KKN+LRLDDWVLCRIYNKKG++EK   
Sbjct:   152 LVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGTMEKYLP 211

Query:   151 VTNRRPNFXXXXXXXXXKKPVVMP 174
                 +P              V+ P
Sbjct:   212 AAAEKPTEKMSTSDSRCSSHVISP 235

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0001666 "response to hypoxia" evidence=IMP

GO:0009507 "chloroplast" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

TAIR|locus:2011531 NAC019 "NAC domain containing protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 455 (165.2 bits), Expect = 4.5e-43, P = 4.5e-43
 Identities = 84/117 (71%), Positives = 95/117 (81%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKK 91
             PW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKK
Sbjct:    56 PWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKK 115

Query:    92 ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 148
             ALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct:   116 ALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQKQ 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010286 "heat acclimation" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090176 NAC3 "NAC domain containing protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 84/117 (71%), Positives = 94/117 (80%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKK 91
             PW LP  AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKK
Sbjct:    56 PWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKK 115

Query:    92 ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQ 148
             ALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +KQ
Sbjct:   116 ALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQTSAQKQ 169

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA;TAS

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009695 "jasmonic acid biosynthetic process" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009863 "salicylic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2011516 NAM "NO APICAL MERISTEM" [Arabidopsis thaliana (taxid:3702)]

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 82/122 (67%), Positives = 93/122 (76%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-----GQPKPV 87
             PW+LP  A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKP+     G  K V
Sbjct:    59 PWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKV 118

Query:    88 GIKKALVFYAGKAPKGEKTNWIMHEYRLAD-----VDRSARKKNSLRLDDWVLCRIYNKK 142
             G+KKALVFY+GK PKG K++WIMHEYRL D     +     KKNSLRLDDWVLCRIY K 
Sbjct:   119 GVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKN 178

Query:   143 GS 144
              S
Sbjct:   179 NS 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

TAIR|locus:2008490 NAC025 "NAC domain containing protein 25" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 82/123 (66%), Positives = 89/123 (72%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG--QPKPVGIK 90
             PW+LP  A +GE EWYFF+PRDRKYPNG RPNRAA SGYWKATG DKPI       VG+K
Sbjct:    58 PWELPSKASFGEHEWYFFSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHKVGVK 117

Query:    91 KALVFYAGKAPKGEKTNWIMHEYRLAD---------VDRSARKKNSLRLDDWVLCRIYNK 141
             KALVFY GK PKG KT+WIMHEYRL D          D +  +KNSLRLDDWVLCRIY K
Sbjct:   118 KALVFYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYKK 177

Query:   142 KGS 144
               S
Sbjct:   178 NSS 180

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2124014 RD26 "RESPONSIVE TO DESICCATION 26" [Arabidopsis thaliana (taxid:3702)]

 Score = 424 (154.3 bits), Expect = 8.7e-40, P = 8.7e-40
 Identities = 84/114 (73%), Positives = 91/114 (79%)

Query:    40 ALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKKALVFYAG 98
             AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I    + VGIKKALVFYAG
Sbjct:    80 ALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAG 139

Query:    99 KAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEKQQQVT 152
             KAPKG KTNWIMHEYRL +  RS     S +LDDWVLCRIY KK S  ++Q VT
Sbjct:   140 KAPKGTKTNWIMHEYRLIEHSRS---HGSSKLDDWVLCRIY-KKTSGSQRQAVT 189

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;IDA

GO:0009414 "response to water deprivation" evidence=RCA;IMP

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0007165 "signal transduction" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009753 "response to jasmonic acid stimulus" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

TAIR|locus:2090186 NAC2 "NAC domain containing protein 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 81/124 (65%), Positives = 94/124 (75%)

Query:    33 PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI----GQPKPVG 88
             PW+LP  A +GE+EWYFF+PRDRKYPNG+RPNRAA SGYWKATG DKP+    G  K VG
Sbjct:    59 PWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQK-VG 117

Query:    89 IKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSAR--------KKNSLRLDDWVLCRIYN 140
             +KKALVFY+GK PKG K++WIMHEYRL +   + R        KKNSLRLDDWVLCRIY 
Sbjct:   118 VKKALVFYSGKPPKGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYK 177

Query:   141 KKGS 144
             K  +
Sbjct:   178 KNNA 181

GO:0003677 "DNA binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;NAS

GO:0005634 "nucleus" evidence=ISM

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0007275 "multicellular organismal development" evidence=ISS

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q39013	NAC2_ARATH	No assigned EC number	0.6213	0.7797	0.7716	yes	no
Q7F2L3	NAC48_ORYSJ	No assigned EC number	0.6	0.8636	0.8151	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	286
pfam02365	130	pfam02365, NAM, No apical meristem (NAM) protein	5e-51

>gnl|CDD|216997 pfam02365, NAM, No apical meristem (NAM) protein

 Score =  163 bits (416), Expect = 5e-51
 Identities = 61/87 (70%), Positives = 70/87 (80%), Gaps = 3/87 (3%)

Query: 33  PWDLPDLALYG-EKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI--GQPKPVGI 89
           PWDLPD    G ++EWYFF+PRDRKYPNGSR NRA GSGYWKATG DKP+     + VG+
Sbjct: 44  PWDLPDGKAKGGDREWYFFSPRDRKYPNGSRTNRATGSGYWKATGKDKPVLSKGGEVVGM 103

Query: 90  KKALVFYAGKAPKGEKTNWIMHEYRLA 116
           KK LVFY G+APKGEKT+W+MHEYRL 
Sbjct: 104 KKTLVFYKGRAPKGEKTDWVMHEYRLE 130

This is a family of no apical meristem (NAM) proteins these are plant development proteins. Mutations in NAM result in the failure to develop a shoot apical meristem in petunia embryos. NAM is indicated as having a role in determining positions of meristems and primordial. One member of this family NAP (NAC-like, activated by AP3/PI) is encoded by the target genes of the AP3/PI transcriptional activators and functions in the transition between growth by cell division and cell expansion in stamens and petals. Length = 130

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
PF02365	129	NAM: No apical meristem (NAM) protein; InterPro: I	99.97

>PF02365 NAM: No apical meristem (NAM) protein; InterPro: IPR003441 The NAC domain (for Petunia hybrida (Petunia) NAM and for Arabidopsis ATAF1, ATAF2, and CUC2) is an N-terminal module of ~160 amino acids, which is found in proteins of the NAC family of plant-specific transcriptional regulators (no apical meristem (NAM) proteins) []

Probab=99.97  E-value=2e-33  Score=232.91  Aligned_cols=112  Identities=47%  Similarity=0.951  Sum_probs=85.7

Q ss_pred             CccchhhHhccCCCCCCCCC-CCcccccCCCCCCCCCCccccCCCceEEEEeeccccCCCCCCCccccCCceEEecCCcc
Q 023190            1 MRSSLCTICAVNAFRSQSPF-RLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADK   79 (286)
Q Consensus         1 V~hYL~rKi~G~pl~~~~~~-~~I~evDVY~~ePWdLP~~~~~ge~eWYFFs~r~rk~~nG~R~~Ratg~G~WK~tG~~k   79 (286)
                      |.+||++|+.|.++    +. ++|+++|||++|||+|++....++++||||+++++++.+|.|.+|++++|+||.+|+.+
T Consensus        15 i~~yL~~k~~g~~~----~~~~~i~~~Diy~~~P~~L~~~~~~~~~~~yFF~~~~~~~~~~~r~~R~~~~G~Wk~~g~~~   90 (129)
T PF02365_consen   15 INHYLRPKILGEPL----PCEDVIHDVDIYSAHPWELPAKFKGGDEEWYFFSPRKKKYPNGGRPNRVTGGGYWKSTGKEK   90 (129)
T ss_dssp             HHCTHHHHHTT-HH----CS-CHSEE--GGGS-GGGCHHHSSS-SSEEEEEEE----------S-EEETTEEEEEECEEE
T ss_pred             HHHHHHHHhcCCCC----CcccceeecccCccChHHhhhhccCCCceEEEEEecccccCCcccccccccceEEeeccccc
Confidence            46999999999999    66 89999999999999999544446789999999999999999999999999999999999


Q ss_pred             ccc--CCcceeeEEEEeeccCCCCCCCccCeEEeEEEec
Q 023190           80 PIG--QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLA  116 (286)
Q Consensus        80 ~I~--~g~~VG~KktLvFy~gk~p~g~kT~WiMhEY~L~  116 (286)
                      +|.  ++++||+|++|+||.++.+++.+|+|+||||+|.
T Consensus        91 ~i~~~~g~~iG~k~~l~f~~~~~~~~~kt~W~M~EY~L~  129 (129)
T PF02365_consen   91 PIKDPGGKVIGFKKTLVFYSGKSPNGKKTGWVMHEYSLE  129 (129)
T ss_dssp             EEEE-TTCEEEEEEEEEEEESSTTS-EEEEEEEEEEEE-
T ss_pred             ccccccceeeeeEEEEEEEeccCCCCCcCCeEEEEEEeC
Confidence            885  4789999999999999888999999999999984

NAC proteins are involved in developmental processes, including formation of the shoot apical meristem, floral organs and lateral shoots, as well as in plant hormonal control and defence. The NAC domain is accompanied by diverse C-terminal transcriptional activation domains. The NAC domain has been shown to be a DNA-binding domain (DBD) and a dimerization domain [,]. The NAC domain can be subdivided into five subdomains (A-E). Each subdomain is distinguishable by blocks of heterogeneous amino acids or gaps. While the NAC domains were rich in basic amino acids (R, K and H) as a whole, the distribution of positive and negative amino acids in each subdomain were unequal. Subdomains C and D are rich in basic amino acids but poor in acidic amino acids, while subdomain B contains a high proportion of acidic amino acids. Putative nuclear localization signals (NLS) have been detected in subdomains C and D []. The DBD is contained within a 60 amino acid region located within subdomains D and E []. The overall structure of the NAC domain monomer consists of a very twisted antiparallel beta-sheet, which packs against an N-terminal alpha-helix on one side and one shorter helix on the other side surrounded by a few helical elements. The structure suggests that the NAC domain mediates dimerization through conserved interactions including a salt bridge, and DNA binding through the NAC dimer face rich in positive charges [].; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 1UT4_A 3SWM_B 4DUL_B 3SWP_D 1UT7_B 3ULX_A.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	286
3ulx_A	174	Crystal Structural Of The Conserved Domain Of Rice		8e-44
1ut4_A	171	Structure Of The Conserved Domain Of Anac, A Member		2e-43
3swm_A	174	The Nac Domain Of Anac019 In Complex With Dna, Gold		2e-43

>pdb|3ULX|A Chain A, Crystal Structural Of The Conserved Domain Of Rice Stress-Responsive Nac1 Length = 174

Iteration: 1
 Score =  173 bits (439), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 87/118 (73%), Positives = 99/118 (83%), Gaps = 3/118 (2%)
Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKK 91
           PWDLP+ AL+G +EWYFFTPRDRKYPNGSRPNRAAG+GYWKATGADKP+  + + +GIKK
Sbjct: 57  PWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKK 116
Query: 92  ALVFYAGKAPKGEKTNWIMHEYRL--ADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 147
           ALVFYAGKAP+G KT+WIMHEYRL  A    +  KK SLRLDDWVLCR+YNKK   EK
Sbjct: 117 ALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>pdb|1UT4|A Chain A, Structure Of The Conserved Domain Of Anac, A Member Of The Nac Family Of Transcription Factors Length = 171

Iteration: 1
 Score =  172 bits (436), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 83/116 (71%), Positives = 94/116 (81%), Gaps = 4/116 (3%)
Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKK 91
           PW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKK
Sbjct: 59  PWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKK 118
Query: 92  ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 147
           ALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K
Sbjct: 119 ALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>pdb|3SWM|A Chain A, The Nac Domain Of Anac019 In Complex With Dna, Gold Derivative Length = 174

Iteration: 1
 Score =  172 bits (435), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 83/116 (71%), Positives = 94/116 (81%), Gaps = 4/116 (3%)
Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPIG-QPKPVGIKK 91
           PW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKK
Sbjct: 62  PWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKK 121
Query: 92  ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 147
           ALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K
Sbjct: 122 ALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQK 174
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	7e-74
1ut7_A	171	No apical meristem protein; transcription regulati	1e-72
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} Length = 174

 Score =  222 bits (569), Expect = 7e-74
 Identities = 90/118 (76%), Positives = 102/118 (86%), Gaps = 3/118 (2%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKK 91
           PWDLP+ AL+G +EWYFFTPRDRKYPNGSRPNRAAG+GYWKATGADKP+  + + +GIKK
Sbjct: 57  PWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKPVAPRGRTLGIKK 116

Query: 92  ALVFYAGKAPKGEKTNWIMHEYRLADVDRSAR--KKNSLRLDDWVLCRIYNKKGSIEK 147
           ALVFYAGKAP+G KT+WIMHEYRLAD  R+A   KK SLRLDDWVLCR+YNKK   EK
Sbjct: 117 ALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWEK 174

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A Length = 171

 Score =  219 bits (561), Expect = 1e-72
 Identities = 83/116 (71%), Positives = 94/116 (81%), Gaps = 4/116 (3%)

Query: 33  PWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIKK 91
           PW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIKK
Sbjct: 59  PWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKK 118

Query: 92  ALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIEK 147
           ALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+ S +K
Sbjct: 119 ALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQSSAQK 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.4 bits (96), Expect = 3e-04
 Identities = 26/200 (13%), Positives = 52/200 (26%), Gaps = 67/200 (33%)

Query: 105 KTNWIMHEYRLADVDRSARKKNSLR-LDD----WVL------CRIYNKKGSIEKQQQVTN 153
           + + I  +  L  + +S   +N L  L +             C+I            +T 
Sbjct: 226 RIHSI--QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKIL-----------LTT 272

Query: 154 RRPNFTETETETEEKKPVV--MPSGMDTSTSGGALLPNPASTVTGTGTVNDYMYFDTS-D 210
           R    T+  +        +      +        LL                 Y D    
Sbjct: 273 RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL----------------KYLDCRPQ 316

Query: 211 SVPKLNTDSSCSEHVVSPEFTC-----EVQSEPKMQPWENTLGFPYNYLDSAMDISFNSQ 265
            +P+       +    +P          ++       W+N      + L + ++ S    
Sbjct: 317 DLPR----EVLT---TNP-RRLSIIAESIRDGLAT--WDNWKHVNCDKLTTIIESSL--- 363

Query: 266 LQGNNQLSP--LQDMFMYFT 283
               N L P   + MF   +
Sbjct: 364 ----NVLEPAEYRKMFDRLS 379

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
3ulx_A	174	Stress-induced transcription factor NAC1; NAC fami	100.0
1ut7_A	171	No apical meristem protein; transcription regulati	100.0

>3ulx_A Stress-induced transcription factor NAC1; NAC family, stress-responsive, DNA binding protein; 2.60A {Oryza sativa subsp} SCOP: b.143.1.1

Probab=100.00  E-value=3.5e-47  Score=332.11  Aligned_cols=142  Identities=65%  Similarity=1.195  Sum_probs=118.4

Q ss_pred             CccchhhHhccCCCCCCCCCCCcccccCCCCCCCCCCccccCCCceEEEEeeccccCCCCCCCccccCCceEEecCCccc
Q 023190            1 MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKP   80 (286)
Q Consensus         1 V~hYL~rKi~G~pl~~~~~~~~I~evDVY~~ePWdLP~~~~~ge~eWYFFs~r~rk~~nG~R~~Ratg~G~WK~tG~~k~   80 (286)
                      |.|||++|+.|.++    +.++|+|+|||++|||+||+.+..++++||||++|++||++|.|+||+|++||||++|++++
T Consensus        29 V~~YL~~K~~g~~~----~~~~I~evDvy~~~Pw~Lp~~~~~g~~ewYFFs~r~~ky~~g~R~nR~t~~G~WkatG~dk~  104 (174)
T 3ulx_A           29 VEHYLCRKAAGQRL----PVPIIAEVDLYKFDPWDLPERALFGAREWYFFTPRDRKYPNGSRPNRAAGNGYWKATGADKP  104 (174)
T ss_dssp             HHHTHHHHHHTCCC----SSSCCEECCGGGSCGGGSGGGCSSCSSEEEEEEECCC-----CCSCEEETTEEEEECSCCEE
T ss_pred             HHHHHHHHhcCCCC----CcCeeeecccccCCchhhhhhhccCCceEEEEeccccccCCCCCceeecCCceEccCCCCcE
Confidence            57999999999999    88999999999999999999988889999999999999999999999999999999999999


Q ss_pred             cc-CCcceeeEEEEeeccCCCCCCCccCeEEeEEEecCcchhh--hhcCCCCCCCEEEEEEEecCCCCc
Q 023190           81 IG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSA--RKKNSLRLDDWVLCRIYNKKGSIE  146 (286)
Q Consensus        81 I~-~g~~VG~KktLvFy~gk~p~g~kT~WiMhEY~L~~~~~~~--~~~~~~~~~d~VLCRIy~Kk~~~~  146 (286)
                      |. .+++||+||+|+||.|++|++.||+|+||||+|.+.....  .+.+.+..++|||||||+|++.-+
T Consensus       105 I~~~g~~vG~KktLvFy~g~~p~g~kT~WvMhEY~L~~~~~~~~~~~~~~~~~~~wVlCrvf~K~~~~~  173 (174)
T 3ulx_A          105 VAPRGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRLADAGRAAAGAKKGSLRLDDWVLCRLYNKKNEWE  173 (174)
T ss_dssp             ECCSSSCCEEEEEEEEEESSTTSCEEEEEEEEEEEECSCC-----------CCSSEEEEEEEESCC---
T ss_pred             EeeCCcEEEEEEEEEEecCCCCCCCcCCeEEEEEEeCCCCCcccccccCCCCCCCEEEEEEEEcCCCcC
Confidence            96 4789999999999999999999999999999999875432  122335678999999999987544

>1ut7_A No apical meristem protein; transcription regulation, transcription, transcription factor, DNA binding, abscisic acid response, NAC domain; 1.9A {Arabidopsis thaliana} SCOP: b.143.1.1 PDB: 1ut4_A 4dul_A 3swp_A 3swm_A

Probab=100.00  E-value=2.4e-46  Score=325.93  Aligned_cols=139  Identities=63%  Similarity=1.131  Sum_probs=114.1

Q ss_pred             CccchhhHhccCCCCCCCCCCCcccccCCCCCCCCCCccccCCCceEEEEeeccccCCCCCCCccccCCceEEecCCccc
Q 023190            1 MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKP   80 (286)
Q Consensus         1 V~hYL~rKi~G~pl~~~~~~~~I~evDVY~~ePWdLP~~~~~ge~eWYFFs~r~rk~~nG~R~~Ratg~G~WK~tG~~k~   80 (286)
                      |.|||++|+.|.++    +.++|+++|||++|||+||+.+..++++||||+++++||++|.|+||+|++||||++|++++
T Consensus        31 v~~YL~~K~~g~~~----~~~~I~e~Diy~~~Pw~Lp~~~~~g~~ewyFFs~r~~k~~~g~R~~R~t~~G~Wk~tG~~k~  106 (171)
T 1ut7_A           31 MVQYLCRKAAGYDF----SLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKI  106 (171)
T ss_dssp             HHHTHHHHHTTCCC----SSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEE
T ss_pred             HHHHHHHHhcCCCC----CCCeEeecccccCChhHhhchhhcCCccEEEEeccccccCCCCcccccCCCCEEeccCCCce
Confidence            57999999999999    88999999999999999999988889999999999999999999999999999999999999


Q ss_pred             cc-CCcceeeEEEEeeccCCCCCCCccCeEEeEEEecCcchhhhhcCCCCCCCEEEEEEEecCCCCc
Q 023190           81 IG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKKGSIE  146 (286)
Q Consensus        81 I~-~g~~VG~KktLvFy~gk~p~g~kT~WiMhEY~L~~~~~~~~~~~~~~~~d~VLCRIy~Kk~~~~  146 (286)
                      |. .+++||+||+|+||.|+++++.||+|+||||+|.+...   ..+....++|||||||+|++..+
T Consensus       107 I~~~~~~vG~KktLvFy~g~~p~g~kT~WvMhEY~l~~~~~---~~~~~~~~~~VlCrv~~k~~~~~  170 (171)
T 1ut7_A          107 ISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSR---RNGSTKLDDWVLCRIYKKQSSAQ  170 (171)
T ss_dssp             EEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------CCEEEEEEEECC----
T ss_pred             EEecCcEEEEEEEEEEEcCcCCCCCcCCeEEEEEEcCCCcc---ccCcccCCCEEEEEEEEcCCCCC
Confidence            95 46899999999999999999999999999999998642   11234578999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d1ut7a_	166	b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mou	2e-48

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 166

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  156 bits (396), Expect = 2e-48
 Identities = 81/112 (72%), Positives = 91/112 (81%), Gaps = 4/112 (3%)

Query: 32  IPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKPI-GQPKPVGIK 90
            PW LP+ AL+GEKEWYFF+PRDRKYPNGSRPNR AGSGYWKATG DK I  + + VGIK
Sbjct: 58  DPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIK 117

Query: 91  KALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK 142
           KALVFY GKAPKG KTNWIMHEYRL +    +R+  S +LDDWVLCRIY K+
Sbjct: 118 KALVFYIGKAPKGTKTNWIMHEYRLIE---PSRRNGSTKLDDWVLCRIYKKQ 166

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d1ut7a_	166	No apical meristem (NAM, ANAC) {Mouse-ear cress (A	100.0

>d1ut7a_ b.143.1.1 (A:) No apical meristem (NAM, ANAC) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: NAC domain
superfamily: NAC domain
family: NAC domain
domain: No apical meristem (NAM, ANAC)
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.4e-43  Score=300.72  Aligned_cols=135  Identities=64%  Similarity=1.146  Sum_probs=112.8

Q ss_pred             CccchhhHhccCCCCCCCCCCCcccccCCCCCCCCCCccccCCCceEEEEeeccccCCCCCCCccccCCceEEecCCccc
Q 023190            1 MRSSLCTICAVNAFRSQSPFRLSPKSIFTNLIPWDLPDLALYGEKEWYFFTPRDRKYPNGSRPNRAAGSGYWKATGADKP   80 (286)
Q Consensus         1 V~hYL~rKi~G~pl~~~~~~~~I~evDVY~~ePWdLP~~~~~ge~eWYFFs~r~rk~~nG~R~~Ratg~G~WK~tG~~k~   80 (286)
                      |.|||.+|+.|.|+    +.++|+++|||++|||+||+....++++||||+++++++++|+|.+|++|+|+||++|+++.
T Consensus        31 v~~YL~~Ki~g~~l----~~~~I~~~Dvy~~~Pw~Lp~~~~~~~~~wyFft~~~~k~~~g~r~~R~~g~G~Wk~~g~~~~  106 (166)
T d1ut7a_          31 MVQYLCRKAAGYDF----SLQLIAEIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKI  106 (166)
T ss_dssp             HHHTHHHHHTTCCC----SSCCSEECCGGGSCGGGHHHHSSSCSSEEEEEEECCC-------CCEEETTEEEEEEEEEEE
T ss_pred             HHHHHHHHHcCCCC----CcccceeccCCcCChhhccchhccCcceEEEEeeeccccCCCCccccccCCCEecccCCCce
Confidence            56999999999999    88999999999999999999887889999999999999999999999999999999999999


Q ss_pred             cc-CCcceeeEEEEeeccCCCCCCCccCeEEeEEEecCcchhhhhcCCCCCCCEEEEEEEecC
Q 023190           81 IG-QPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKNSLRLDDWVLCRIYNKK  142 (286)
Q Consensus        81 I~-~g~~VG~KktLvFy~gk~p~g~kT~WiMhEY~L~~~~~~~~~~~~~~~~d~VLCRIy~Kk  142 (286)
                      |. ++++||+|++|+||+++.+++.+|+|+||||+|.+.....   +....++|||||||+|+
T Consensus       107 i~~~g~~vG~kk~l~fy~~~~~~~~~t~W~M~EY~l~~~~~~~---~~~~~~~~VLCrI~~Kk  166 (166)
T d1ut7a_         107 ISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRRN---GSTKLDDWVLCRIYKKQ  166 (166)
T ss_dssp             EEETTEEEEEEEEEEEEESSTTSCEEEEEEEEEEEECCCC-----------CCEEEEEEEECC
T ss_pred             EecCCcEEEEEEEEEEEecCCCCCCccCeEEEEEecCCccccc---CccccCCEEEEEEEecC
Confidence            85 5789999999999999999999999999999998865322   23456899999999885