Citrus Sinensis ID: 023244

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-----
Protein Sequence
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE
Secondary Structure (PSIPRED)
cccccccEEEEccccHHHHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHccccccccEEEEEccccccccHHHHHccccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccccEEEEccccccccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccccHHHHHHHHHcccccccccccccccEEHHHHHHHHHHHHccccccccEEEEcccccHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEcccHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHcccccHHEEEEEccccccccHHHHHcccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccHHHHHHHHHHccccHHHHHHHcccEEEHHHHHHHHHHHHcccccccEEEEccccccHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
meegkgrvcvtggtgFIASWLIMRLLDHgysvtttvrseldpehrnskdlsflknlpgaseRLRIFHadlshpdgfdaaIAGCTGvlhvatpvdfedkepeeVITQRAINGTLGILKSCLKSGTVKRVVYTSsnaavfyndkdvdmmdetfWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGldlvtlipsmvvgpficpkfagsVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEypdakgryicsSHTLTIQEMAEFLsakypeypiptve
Flexible Loop (DISEMBL)
meegkgrvcvtgGTGFIASWLIMRLLDHGYSVTTTVrseldpehrnskdlsflkNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITqraingtlgilkSCLKSGTVKRVVYtssnaavfyndkdvdmMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEflsakypeypiptve
Low Complexity Region (SEG)
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE
Disordered region (IsUnstruct)
******RVCVTGGTGFIASWLIMRLLDHGYSVTTTV****************L**L*GASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYP********
Disordered Region (DISOPRED)
****KGR**VTGGTGFIASWLIMRLLDHGYSVTTTVRSELD*****SKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP***
Disordered Region (DISEMBL)
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE
Disordered Region (DISPRO)
****KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	285	2.2.26 [Sep-21-2011]
Q9XES5	348	Bifunctional dihydroflavo	N/A	no	0.950	0.778	0.481	2e-73
P51106	354	Dihydroflavonol-4-reducta	N/A	no	0.971	0.782	0.471	7e-73
Q84KP0	347	Bifunctional dihydroflavo	N/A	no	0.950	0.780	0.474	1e-72
P51102	382	Dihydroflavonol-4-reducta	no	no	0.975	0.727	0.477	2e-70
P51110	337	Dihydroflavonol-4-reducta	no	no	0.943	0.798	0.471	5e-69
P51105	366	Dihydroflavonol-4-reducta	N/A	no	0.964	0.751	0.457	7e-69
Q500U8	326	Tetraketide alpha-pyrone	no	no	0.957	0.837	0.473	1e-68
P14720	380	Dihydroflavonol-4-reducta	N/A	no	0.943	0.707	0.467	1e-68
P51108	357	Dihydroflavonol-4-reducta	N/A	no	0.971	0.775	0.477	2e-67
P51104	360	Dihydroflavonol-4-reducta	N/A	no	0.961	0.761	0.462	4e-66

>sp|Q9XES5|DFRA_MALDO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1

 Score =  275 bits (704), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 133/276 (48%), Positives = 184/276 (66%), Gaps = 5/276 (1%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+HGY+V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVR---DP--TNQKKVKHLLDLPKAETHLTLWK 62

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GC+GV HVATP+DFE K+PE  + +  ING L ILK+C K+ TV++
Sbjct: 63  ADLADEGSFDEAIQGCSGVFHVATPMDFESKDPENEVIKPTINGLLDILKACQKAKTVRK 122

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           +V+TSS   V   +    + DE+ WSDV++ R +   G  Y +SKTL E+AA ++A+E+ 
Sbjct: 123 LVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENN 182

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLL 247
           +D +T+IP++V+GPF+ P    S+ + L+ IL N   YG +     VH+DD+  +HI+L 
Sbjct: 183 IDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLY 242

Query: 248 EYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           E+P A+GRYICSSH  TI E+ + L  KYPEY IPT
Sbjct: 243 EHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPT 278

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, dihydrokaempferol, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), naringenin to a low extent (10%), but not 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.
Malus domestica (taxid: 3750)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 3EC: 4

>sp|P51106|DFRA_HORVU Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1

 Score =  273 bits (699), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 133/282 (47%), Positives = 185/282 (65%), Gaps = 5/282 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M+  KG V VTG +GF+ SWL+M+LL  GY+V  TVR   DP   N +    L  LPGA 
Sbjct: 1   MDGNKGPVVVTGASGFVGSWLVMKLLQAGYTVRATVR---DPA--NVEKTKPLLELPGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL I+ ADLS    F+ AIAGCTGV HVATP+DF+ ++PE  + +  + G L I+++C 
Sbjct: 56  ERLSIWKADLSEDGSFNEAIAGCTGVFHVATPMDFDSQDPENEVIKPTVEGMLSIMRACK 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           ++GTVKR+V+TSS  +V   ++     D+  WSD+DY R++   G  Y +SK L E+AA+
Sbjct: 116 EAGTVKRIVFTSSAGSVNIEERPRPAYDQDNWSDIDYCRRVKMTGWMYFVSKALAEKAAM 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           E+A E+GLD +++IP++VVGPF+      S+ ++LALI GN   Y  L    +VH+DD+ 
Sbjct: 176 EYASENGLDFISIIPTLVVGPFLSAGMPPSLVTALALITGNEAHYSILKQVQLVHLDDLC 235

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
            A  FL E+P+A GRYICSSH  TI  +A  L  ++PEY IP
Sbjct: 236 DAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIP 277

Hordeum vulgare (taxid: 4513)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q84KP0|DFRA_PYRCO Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1

 Score =  273 bits (697), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 131/276 (47%), Positives = 184/276 (66%), Gaps = 5/276 (1%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+HGY+V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLEHGYTVRATVR---DP--TNQKKVKHLLDLPKAETHLTLWK 62

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GC+GV HVATP+DFE ++PE  + +  ING L ILK+C K+ TV++
Sbjct: 63  ADLADEGSFDEAIQGCSGVFHVATPMDFESRDPENEVIKPTINGLLDILKACQKAKTVRK 122

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           +V+TSS   V   +    + DE+ WSDV++ R +   G  Y +SKTL E+AA ++A+E+ 
Sbjct: 123 LVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMYFVSKTLAEQAAWKYAKENN 182

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLL 247
           +D +T+IP++V+GPF+ P    S+ + L+ IL N   YG +     VH+DD+  +HI+L 
Sbjct: 183 IDFITIIPTLVIGPFLMPSMPPSLITGLSPILRNESHYGIIKQGQYVHLDDLCLSHIYLY 242

Query: 248 EYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           ++P A+GRYICSSH  TI E+ + L  KYPEY IPT
Sbjct: 243 KHPKAEGRYICSSHDATIHELVKMLREKYPEYNIPT 278

Bifunctional enzyme involved in the flavonoid metabolism. May use dihydroquercetin, eriodictyol, garbanzol (5-deoxydihydrokaempferol), dihydrofisetin (5-deoxydihydroquercetin), dihydrokaempferol to a low extent (5%), but not naringenin, 5-deoxynaringenin or butin (5-deoxyeriodictyol) as substrate.

Pyrus communis (taxid: 23211)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 3

EC: 4

>sp|P51102|DFRA_ARATH Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=3 SV=2

 Score =  266 bits (679), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/283 (47%), Positives = 180/283 (63%), Gaps = 5/283 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M   K  VCVTG +GFI SWL+MRLL+ GY V  TVR   DP   N K +  L +LP A 
Sbjct: 1   MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR---DP--GNLKKVQHLLDLPNAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             L ++ ADLS    +D AI GC GV HVATP+DFE K+PE  + +  +NG LGI+K+C+
Sbjct: 56  TLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACV 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+ TV+R V+TSS   V   +   ++ DE  WSD+++I      G  Y +SKTL E+AA 
Sbjct: 116 KAKTVRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMYFVSKTLAEKAAW 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           +FAEE GLD +++IP++VVGPFI      S+ ++L+ I  N   Y  +     VH+DD+ 
Sbjct: 176 DFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDDLC 235

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            AHIFL E   AKGRYICSSH  TI  +++FL  KYPEY +P+
Sbjct: 236 NAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPS 278

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51110|DFRA_VITVI Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1

 Score =  261 bits (666), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 131/278 (47%), Positives = 181/278 (65%), Gaps = 9/278 (3%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+   +V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERRLTVRATVR---DP--TNVKKVKHLLDLPKAETHLTLWK 62

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC  + TV+R
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRR 122

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAALEFAEE 185
           +V+TSS   V   +  + + DE+ WSD+++ R  K+ +W   Y +SKTL E+AA ++A+E
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW--MYFVSKTLAEQAAWKYAKE 180

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
           + +D +T+IP++VVGPFI      S+ ++L+ I GN   Y  +     VH+DD+  AHI+
Sbjct: 181 NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIY 240

Query: 246 LLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           L E P A+GRYICSSH   I ++A+ L  KYPEY IPT
Sbjct: 241 LFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPT 278

Vitis vinifera (taxid: 29760)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51105|DFRA_GERHY Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1

 Score =  260 bits (665), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 130/284 (45%), Positives = 183/284 (64%), Gaps = 9/284 (3%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
           E+    VCVTG  GFI SWL+MRLL+ GY V  TVR   DP   + K +  L  LP A  
Sbjct: 3   EDSPATVCVTGAAGFIGSWLVMRLLERGYVVHATVR---DP--GDLKKVKHLLELPKAQT 57

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
            L+++ ADL+    FD AI GC GV H+ATP+DFE K+PE  I +  I G L I++SC+K
Sbjct: 58  NLKLWKADLTQEGSFDEAIQGCHGVFHLATPMDFESKDPENEIIKPTIEGVLSIIRSCVK 117

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAA 179
           + TVK++V+TSS   V   +K + + DE+ WSD+D+I  +K+ +W   Y +SKTL E+AA
Sbjct: 118 AKTVKKLVFTSSAGTVNGQEKQLHVYDESHWSDLDFIYSKKMTAW--MYFVSKTLAEKAA 175

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
            +  + + +  +++IP++VVGPFI   F  S+ ++L+LI GN   Y  +     VH+DD+
Sbjct: 176 WDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDL 235

Query: 240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
              HI+L E P AKGRYICSSH  TI ++A+ +  K+PEY IPT
Sbjct: 236 CECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPT 279

Gerbera hybrida (taxid: 18101)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|Q500U8|TKPR1_ARATH Tetraketide alpha-pyrone reductase 1 OS=Arabidopsis thaliana GN=TKPR1 PE=2 SV=1

 Score =  259 bits (663), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 135/285 (47%), Positives = 184/285 (64%), Gaps = 12/285 (4%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M++ KG+VCVTG +GF+ASWL+ RLL  GY V  TVR   DP   N K L+ L  L GA 
Sbjct: 1   MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR---DP--GNEKKLAHLWKLEGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERLR+  ADL     FD AI GC GV H A+PV      PEE I + AI GTL +L+SC 
Sbjct: 56  ERLRLVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCR 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
           K+ ++KRVV TSS++ V   D D D    +DE+ W+ V+  ++   W   YA+SKTL E+
Sbjct: 116 KNPSLKRVVLTSSSSTVRIRD-DFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQ 171

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVD 237
           AA +F+EE+G+DLVT++PS +VGP + P    +    L L+ G  E++ +      VH+D
Sbjct: 172 AAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHID 231

Query: 238 DVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
           DVAR HI + E+  A+GRYICSS+ ++++E+  FLSA+YP  PIP
Sbjct: 232 DVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIP 276

Involved in the biosynthesis of hydroxylated tetraketide compounds that serve as sporopollenin precursors (the main constituents of exine). Is essential for pollen wall development. Acts on tetraketide alpha-pyrones and reduces the carbonyl function on the tetraketide alkyl chain to a secondary alcohol function.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P14720|DFRA_PETHY Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2

 Score =  259 bits (663), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 130/278 (46%), Positives = 179/278 (64%), Gaps = 9/278 (3%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG  GFI SWL+MRLL+ GY+V  TVR   DPE  N K +  L  LP A   L ++ 
Sbjct: 18  VCVTGAAGFIGSWLVMRLLERGYNVHATVR---DPE--NKKKVKHLLELPKADTNLTLWK 72

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GC GV HVATP+DFE K+PE  + +  + G L I++SC K+ TVKR
Sbjct: 73  ADLTVEGSFDEAIQGCQGVFHVATPMDFESKDPENEVIKPTVRGMLSIIESCAKANTVKR 132

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAALEFAEE 185
           +V+TSS   +   ++     D+T WSD+D+I  +K+  W   Y  SK L E+AA+E A++
Sbjct: 133 LVFTSSAGTLDVQEQQKLFYDQTSWSDLDFIYAKKMTGW--MYFASKILAEKAAMEEAKK 190

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
             +D +++IP +VVGPFI P F  S+ ++L+LI GN   Y  +     VH+DD+  AHIF
Sbjct: 191 KNIDFISIIPPLVVGPFITPTFPPSLITALSLITGNEAHYCIIKQGQYVHLDDLCEAHIF 250

Query: 246 LLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           L E+P A GR+ICSSH   I ++A+ +  K+PEY +PT
Sbjct: 251 LYEHPKADGRFICSSHHAIIYDVAKMVREKWPEYYVPT 288

Petunia hybrida (taxid: 4102)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51108|DFRA_MAIZE Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1

 Score =  255 bits (652), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 137/287 (47%), Positives = 185/287 (64%), Gaps = 10/287 (3%)

Query: 1   MEEG-----KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN 55
           ME G     KG V VTG +GF+ SWL+M+LL  GY+V  TVR   DP   N      L +
Sbjct: 1   MERGAGASEKGTVLVTGASGFVGSWLVMKLLQAGYTVRATVR---DPA--NVGKTKPLMD 55

Query: 56  LPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGI 115
           LPGA+ERL I+ ADL+    F  AI GCTGV HVATP+DF  K+PE  + +  + G + I
Sbjct: 56  LPGATERLSIWKADLAEEGSFHDAIRGCTGVFHVATPMDFLSKDPENEVIKPTVEGMISI 115

Query: 116 LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLT 175
           +++C ++GTV+R+V+TSS   V   ++   + DE  W+DVD+ R++   G  Y +SKTL 
Sbjct: 116 MRACKEAGTVRRIVFTSSAGTVNLEERQRPVYDEESWTDVDFCRRVKMTGWMYFVSKTLA 175

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVH 235
           E+AAL +A EHGLDLVT+IP++VVGPFI      S+ ++LALI GN   Y  L    ++H
Sbjct: 176 EKAALAYAAEHGLDLVTIIPTLVVGPFISASMPPSLITALALITGNAPHYSILKQVQLIH 235

Query: 236 VDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
           +DD+  A IFL E P A GRY+CSSH +TI  +A  L  +YPEY +P
Sbjct: 236 LDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVP 282

Zea mays (taxid: 4577)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

>sp|P51104|DFRA_DIACA Dihydroflavonol-4-reductase OS=Dianthus caryophyllus GN=A PE=2 SV=1

 Score =  251 bits (641), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 130/281 (46%), Positives = 179/281 (63%), Gaps = 7/281 (2%)

Query: 4   GKGR-VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           G+G  VCVTG +GFI SWLIMRLL+ GY+V  TVR   DP+  N+K +  L +LP A   
Sbjct: 20  GQGETVCVTGASGFIGSWLIMRLLERGYTVRATVR---DPD--NTKKVQHLLDLPNAKTN 74

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           L ++ ADL     FDAA+ GCTGV H+ATP+DFE K+PE  + +  ING L ILKSC+K+
Sbjct: 75  LTLWKADLHEEGSFDAAVDGCTGVFHIATPMDFESKDPENEMIKPTINGMLDILKSCVKA 134

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
             ++RVV+TSS   V        + DET WS +D+IR +   G  Y +SK L E+AA ++
Sbjct: 135 -KLRRVVFTSSGGTVNVEATQKPVYDETCWSALDFIRSVKMTGWMYFVSKILAEQAAWKY 193

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA 242
           A E+ L+ +++IP +VVGPFI P    S+ ++L+ I      Y  +     VH+DD+  +
Sbjct: 194 AAENNLEFISIIPPLVVGPFIMPSMPPSLITALSPITRTESHYTIIKQGQFVHLDDLCMS 253

Query: 243 HIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           HIFL E P A GRYI S+   TI ++A+ L  +YPEY +PT
Sbjct: 254 HIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPT 294

Dianthus caryophyllus (taxid: 3570)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 1

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
224063846	327	predicted protein [Populus trichocarpa]	0.985	0.859	0.691	1e-115
225453897	327	PREDICTED: dihydroflavonol-4-reductase [	0.985	0.859	0.691	1e-115
147769574	327	hypothetical protein VITISV_025424 [Viti	0.985	0.859	0.687	1e-114
225453895	327	PREDICTED: dihydroflavonol-4-reductase [	0.985	0.859	0.680	1e-113
225453889	335	PREDICTED: dihydroflavonol-4-reductase i	0.985	0.838	0.698	1e-112
296089142	665	unnamed protein product [Vitis vinifera]	0.985	0.422	0.698	1e-112
225453893	351	PREDICTED: dihydroflavonol-4-reductase-l	0.978	0.794	0.673	1e-108
224087435	328	predicted protein [Populus trichocarpa]	0.985	0.856	0.671	1e-107
255541306	343	cinnamoyl-CoA reductase, putative [Ricin	0.978	0.813	0.660	1e-107
255570805	326	cinnamoyl-CoA reductase, putative [Ricin	0.978	0.855	0.657	1e-105

>gi|224063846|ref|XP_002301290.1| predicted protein [Populus trichocarpa] gi|222843016|gb|EEE80563.1| predicted protein [Populus trichocarpa]

 Score =  420 bits (1079), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/285 (69%), Positives = 241/285 (84%), Gaps = 4/285 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KG+VCVTGGTGF+ASWLIMRLL+HGYSV TT+R   DPEH+  +D+SFL +LP AS
Sbjct: 1   MEGDKGKVCVTGGTGFLASWLIMRLLEHGYSVHTTIRP--DPEHK--RDVSFLTSLPEAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+L+IF ADLS P+ F+ AI GC GV HVATPVDFE KEPEEV+ QRAI+GTLGILK+CL
Sbjct: 57  EKLQIFQADLSDPNSFEVAIKGCIGVFHVATPVDFESKEPEEVVVQRAIDGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS AAV +ND DVD MDE++W+DV+Y++ L S+   Y ISKTLTE+ AL
Sbjct: 117 NSMTVKRVVYTSSGAAVVFNDSDVDTMDESYWTDVEYVKALKSFAGPYFISKTLTEKRAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           EFA+EHG DLV++IPS + GPFIC KF GSV +SLA++LG +++YG LLN SMVHVDDVA
Sbjct: 177 EFADEHGFDLVSIIPSFINGPFICSKFPGSVHTSLAMVLGEQQKYGTLLNMSMVHVDDVA 236

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
           RAHIFL E+PDAKGR ICSSHT+TI++M++FLS+KYPE P+P++E
Sbjct: 237 RAHIFLFEHPDAKGRNICSSHTITIEKMSKFLSSKYPECPLPSLE 281

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453897|ref|XP_002278913.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089144|emb|CBI38847.3| unnamed protein product [Vitis vinifera]

 Score =  419 bits (1076), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/285 (69%), Positives = 238/285 (83%), Gaps = 4/285 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGFIASWL+M+LL HGYSV  T+RS   P+ +  KD+S+L NLPGAS
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSH--PQSK--KDVSYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+LRI++ADLS P  F+AAI GC GV HVA P+DFED EPEE +T+R++ GTLGILK+CL
Sbjct: 57  EKLRIYNADLSDPSSFEAAIEGCIGVFHVAHPIDFEDTEPEETVTKRSVEGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS +AV YNDK  D+ DE+ WSDVD+++ L+ WG SY ISKT+TERAAL
Sbjct: 117 NSKTVKRVVYTSSTSAVEYNDKGGDIKDESSWSDVDFLKALNYWGLSYMISKTMTERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           +FA EHGLDLVT+IPS VVGPFICP+F GSV ++LAL+LG+++ Y FL++ SMVHVDDV 
Sbjct: 177 DFAHEHGLDLVTVIPSFVVGPFICPRFPGSVNAALALVLGDQQHYHFLMSVSMVHVDDVC 236

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            AHIFLLEYPDAKGRYICSS  LT+ EM+EFLSAKYP+ PIPT++
Sbjct: 237 SAHIFLLEYPDAKGRYICSSDRLTLNEMSEFLSAKYPQLPIPTID 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769574|emb|CAN76937.1| hypothetical protein VITISV_025424 [Vitis vinifera]

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 196/285 (68%), Positives = 237/285 (83%), Gaps = 4/285 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGFIASWL+M+LL HGYSV  T+RS   P+ +  KD+S+L NLPGAS
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSH--PQSK--KDVSYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+LRI++ADLS P  F+AAI GC GV HVA PVDFED EPEE +T+R++ GTLGILK+CL
Sbjct: 57  EKLRIYNADLSDPSSFEAAIEGCNGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS++AV YNDK  ++ DE+ WSDVD+++ L+ WG SY ISKT TERAAL
Sbjct: 117 NSKTVKRVVYTSSSSAVEYNDKGGNIKDESSWSDVDFLKALNYWGXSYMISKTXTERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           +FA EHGLDLVT+IPS VVGPFICP+F GSV ++LAL+LG++++Y  L+N SMVHVDD  
Sbjct: 177 DFAHEHGLDLVTVIPSFVVGPFICPRFPGSVNTALALVLGDQQQYHILMNISMVHVDDAC 236

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            AHIFLLEYPDAKGRYICSS  LT+ EM+EFLSAKYP+ PIPT++
Sbjct: 237 SAHIFLLEYPDAKGRYICSSDRLTLNEMSEFLSAKYPQLPIPTID 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453895|ref|XP_002278887.1| PREDICTED: dihydroflavonol-4-reductase [Vitis vinifera] gi|296089143|emb|CBI38846.3| unnamed protein product [Vitis vinifera]

 Score =  414 bits (1065), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 194/285 (68%), Positives = 237/285 (83%), Gaps = 4/285 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGFIASWL+M+LL HGYSV  T+RS   P+ +  KD+S+L NLPGAS
Sbjct: 1   MEGEKGRVCVTGGTGFIASWLVMKLLQHGYSVNATIRSH--PQSK--KDVSYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+LRI++ADLS P  F+AAI GC GV HVA PVDFED EPEE +T+R++ GTLGILK+CL
Sbjct: 57  EKLRIYNADLSDPSSFEAAIEGCIGVFHVAHPVDFEDTEPEETVTKRSVEGTLGILKACL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS AAV  NDK  D+ DE+ W+DVD+++ L+ WG+SY ISKT+TER+AL
Sbjct: 117 NSKTVKRVVYTSSTAAVVLNDKGGDIKDESSWTDVDFLKALNYWGQSYMISKTITERSAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           +FA+EHGLDLVT+ PS VVGPFICP+F GSV ++LAL+LG++++Y  L+N SMVHVDDV 
Sbjct: 177 DFAQEHGLDLVTVTPSFVVGPFICPRFPGSVNTALALVLGDQQQYHVLMNISMVHVDDVC 236

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            AHIFLLE PDAKGRYICSS  LT+ EM+EFLSAKYP+ PIPT++
Sbjct: 237 SAHIFLLECPDAKGRYICSSDRLTLNEMSEFLSAKYPQLPIPTID 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453889|ref|XP_002278819.1| PREDICTED: dihydroflavonol-4-reductase isoform 1 [Vitis vinifera]

 Score =  412 bits (1058), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/285 (69%), Positives = 228/285 (80%), Gaps = 4/285 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KG+VCVTGGTGFIASWLIM+LL HGYSV  T+RS   P+ +  KD+ +L NLPGAS
Sbjct: 1   MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSH--PQIK--KDIRYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL+IF ADLS P  FDAAI GC GV HVA PVDFE+ EP+E + +R++ GTLGILK CL
Sbjct: 57  ERLQIFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           KS TVKRVVYTSS AAV YN+KD D+MDE+ WSD+D I  +   G SY ISKT  ERAAL
Sbjct: 117 KSKTVKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           EFAE+HGLDLV+LIPS VVGPFICP F GSV   LA+ILGN+  Y +L NTSMVHVDDVA
Sbjct: 177 EFAEQHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGNQHHYQYLKNTSMVHVDDVA 236

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            AHIFLLEYPDAKGRYICSS  LT+ EM+E LSAKYP+ PIPT++
Sbjct: 237 SAHIFLLEYPDAKGRYICSSDILTLNEMSELLSAKYPQLPIPTID 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089142|emb|CBI38845.3| unnamed protein product [Vitis vinifera]

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 199/285 (69%), Positives = 228/285 (80%), Gaps = 4/285 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KG+VCVTGGTGFIASWLIM+LL HGYSV  T+RS   P+ +  KD+ +L NLPGAS
Sbjct: 1   MEGEKGKVCVTGGTGFIASWLIMKLLQHGYSVNATIRSH--PQIK--KDIRYLTNLPGAS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL+IF ADLS P  FDAAI GC GV HVA PVDFE+ EP+E + +R++ GTLGILK CL
Sbjct: 57  ERLQIFKADLSEPQSFDAAIEGCIGVFHVAHPVDFEEGEPQETVIRRSVEGTLGILKGCL 116

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           KS TVKRVVYTSS AAV YN+KD D+MDE+ WSD+D I  +   G SY ISKT  ERAAL
Sbjct: 117 KSKTVKRVVYTSSTAAVVYNNKDEDIMDESSWSDIDVINSIKPLGSSYVISKTRIERAAL 176

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           EFAE+HGLDLV+LIPS VVGPFICP F GSV   LA+ILGN+  Y +L NTSMVHVDDVA
Sbjct: 177 EFAEQHGLDLVSLIPSFVVGPFICPGFPGSVHLILAMILGNQHHYQYLKNTSMVHVDDVA 236

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            AHIFLLEYPDAKGRYICSS  LT+ EM+E LSAKYP+ PIPT++
Sbjct: 237 SAHIFLLEYPDAKGRYICSSDILTLNEMSELLSAKYPQLPIPTID 281

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453893|ref|XP_002278874.1| PREDICTED: dihydroflavonol-4-reductase-like [Vitis vinifera]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 192/285 (67%), Positives = 229/285 (80%), Gaps = 6/285 (2%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGAS 60
           E  KGRVCVTGGTGFIASWLIM+LL HGYSV  T+RS     H  SK D+S++ NLPGAS
Sbjct: 26  ENEKGRVCVTGGTGFIASWLIMKLLQHGYSVNATIRS-----HPGSKKDISYITNLPGAS 80

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E+L+IF+ADLS P  F+ A+ GC GV HVA PVDFE +EPEE +T+R++ GTL ILK+CL
Sbjct: 81  EKLQIFNADLSEPHSFEPALEGCIGVFHVAHPVDFEAREPEETVTRRSVEGTLAILKACL 140

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            S TVKRVVYTSS +AV +NDKD DM DE+ WSDV++IR L S+   Y ISKT TERAAL
Sbjct: 141 NSKTVKRVVYTSSASAVVFNDKDEDMKDESSWSDVEFIRSLGSFAGPYMISKTETERAAL 200

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           EFAE+HGLDLVTL+PS VVGPF+CP   GSV+ +L +I G +++Y  L+NTSMVHVDDVA
Sbjct: 201 EFAEKHGLDLVTLLPSFVVGPFLCPFLPGSVQMALTMIKGIQDQYQNLMNTSMVHVDDVA 260

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            AHIFLL YP+AKGRY CSS+T+TI EM+EFLSAKYP+ PIPT E
Sbjct: 261 SAHIFLLHYPNAKGRYNCSSNTITINEMSEFLSAKYPQLPIPTTE 305

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224087435|ref|XP_002308165.1| predicted protein [Populus trichocarpa] gi|222854141|gb|EEE91688.1| predicted protein [Populus trichocarpa]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/286 (67%), Positives = 229/286 (80%), Gaps = 5/286 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME  KGRVCVTGGTGF+ASWLIM+LL+ GYSV TTVR    PEH+  +D+SFL +LPG S
Sbjct: 1   MEGEKGRVCVTGGTGFVASWLIMKLLEQGYSVNTTVRPH--PEHK--RDVSFLTSLPGGS 56

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATP-VDFEDKEPEEVITQRAINGTLGILKSC 119
           ERL IF+ADLS P GFD AI GC GV HVA+P +DF + EPEEV+ QRA +GTLGILK+C
Sbjct: 57  ERLEIFYADLSEPSGFDVAIKGCIGVFHVASPTLDFGNGEPEEVVIQRATDGTLGILKAC 116

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           L S TVKRVV TSS +AV +N   V+MMDE +WSDVDYI+  +     Y ISKTLTE+ A
Sbjct: 117 LNSKTVKRVVLTSSASAVAFNGSGVEMMDEAYWSDVDYIKASNLPIGPYFISKTLTEKRA 176

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
           LEFA+EHGLDLVTL P+ + GPFICP    SV  SLA++LG+RE+YG L+N  M+H+DDV
Sbjct: 177 LEFAQEHGLDLVTLAPTYIHGPFICPNMPSSVHISLAMVLGDREQYGLLINAPMLHIDDV 236

Query: 240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
           ARAHIFLLEYP+AKGRYICS  T+TI+EM+EFLSAKYP+Y IPT+E
Sbjct: 237 ARAHIFLLEYPEAKGRYICSKDTITIEEMSEFLSAKYPDYSIPTLE 282

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255541306|ref|XP_002511717.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223548897|gb|EEF50386.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/283 (66%), Positives = 232/283 (81%), Gaps = 4/283 (1%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           + K +  +TGGTGF+ASWL+MRLL+HGYSV TT+R   DPEH+  +D+SFL +LPGAS++
Sbjct: 19  QTKVQYVLTGGTGFLASWLVMRLLEHGYSVHTTIRP--DPEHK--RDVSFLTSLPGASKK 74

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           L+IF ADLS PD F+AAI GC GV   ATPVD E+KEPE+VI +RA++G LGILK+CL S
Sbjct: 75  LQIFEADLSDPDSFEAAIKGCIGVFLAATPVDIENKEPEKVIVKRALDGALGILKTCLNS 134

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
            TVKRVVYTSS +AV +NDK    MDE+FW+D +YI+ L S   SY ISK LTE+ AL+F
Sbjct: 135 KTVKRVVYTSSASAVVFNDKVAHAMDESFWNDTNYIKSLMSPFASYLISKILTEKKALDF 194

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA 242
           A+EHGLDLVT++PS +VGPF CPKF GSV +S A+ILG +E+Y  LLN SMVH DDVARA
Sbjct: 195 AQEHGLDLVTVVPSFIVGPFNCPKFPGSVHTSFAMILGEKEQYSALLNMSMVHTDDVARA 254

Query: 243 HIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
           HIFLLE PDAKGRYICSS+T+TI+E+++FLS KYPEYPIPT++
Sbjct: 255 HIFLLENPDAKGRYICSSNTMTIEELSKFLSHKYPEYPIPTID 297

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570805|ref|XP_002526355.1| cinnamoyl-CoA reductase, putative [Ricinus communis] gi|223534314|gb|EEF36026.1| cinnamoyl-CoA reductase, putative [Ricinus communis]

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 188/286 (65%), Positives = 232/286 (81%), Gaps = 7/286 (2%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           MEE K  V VTGGTG++ASWLIMRLLDHGYSV TT+R   DPE +  +D++FL +LPGAS
Sbjct: 1   MEENK--VAVTGGTGYVASWLIMRLLDHGYSVHTTIRP--DPEQK--RDITFLTSLPGAS 54

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSC 119
           ++L+IFHADLS P+ FD AI GC GV HVATP      +EPEEV+T++AI+GT+GILK C
Sbjct: 55  DKLKIFHADLSDPNSFDDAIKGCIGVFHVATPTPGHYTEEPEEVVTRKAIDGTIGILKVC 114

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           L S TVKRVVYTSS +AV +NDK+  +MDE+FWSDVDYI+ L+S+   Y +SKTL E+ A
Sbjct: 115 LNSKTVKRVVYTSSTSAVDFNDKNAQVMDESFWSDVDYIKALNSFASPYWVSKTLAEKKA 174

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
           LEFAEEHGLDLVT+IPS VVGPFICP    SV ++LA+I G  + Y  L NTSMVHVDD+
Sbjct: 175 LEFAEEHGLDLVTVIPSFVVGPFICPNLPASVEAALAMIFGKSDLYNLLRNTSMVHVDDL 234

Query: 240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
           ARAHIFL E+P+AKGR+ICSS  +TI+EM++FLSAKYP++PIPTV+
Sbjct: 235 ARAHIFLFEHPNAKGRHICSSDRITIEEMSKFLSAKYPQFPIPTVD 280

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	285
TAIR|locus:2050882	364	BEN1 [Arabidopsis thaliana (ta	0.968	0.758	0.527	4.3e-70
TAIR|locus:2165427	382	DFR "dihydroflavonol 4-reducta	0.968	0.722	0.477	9.4e-66
TAIR|locus:2122093	326	DRL1 "dihydroflavonol 4-reduct	0.957	0.837	0.473	1.2e-63
TAIR|locus:2195733	340	BAN "BANYULS" [Arabidopsis tha	0.947	0.794	0.429	7e-54
TAIR|locus:2150315	326	AT5G19440 [Arabidopsis thalian	0.940	0.822	0.436	2.2e-50
TAIR|locus:2033904	325	AT1G51410 [Arabidopsis thalian	0.943	0.827	0.424	6.7e-49
TAIR|locus:2201272	321	TKPR2 "tetraketide alpha-pyron	0.919	0.816	0.421	2.9e-48
TAIR|locus:2051018	321	CRL2 "CCR(Cinnamoyl coA:NADP o	0.933	0.828	0.427	1.2e-47
TAIR|locus:2033394	319	AT1G66800 [Arabidopsis thalian	0.926	0.827	0.398	1.6e-47
TAIR|locus:2056171	318	AT2G02400 [Arabidopsis thalian	0.922	0.827	0.386	3.3e-47

TAIR|locus:2050882 BEN1 [Arabidopsis thaliana (taxid:3702)]

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 151/286 (52%), Positives = 192/286 (67%)

Query:     6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
             G VCVTGG+GF+ASWLIMRLL  GYSV  TVR+  +    N KD+S+L  LP ASERL+I
Sbjct:    38 GLVCVTGGSGFVASWLIMRLLQRGYSVRATVRTNSEG---NKKDISYLTELPFASERLQI 94

Query:    66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             F ADL+ P+ F  AI GC  V HVA P+D    E EE +T+R + G +GILKSCL + TV
Sbjct:    95 FTADLNEPESFKPAIEGCKAVFHVAHPMDPNSNETEETVTKRTVQGLMGILKSCLDAKTV 154

Query:   126 KRVVYTSSNAAVFY---NDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAAL 180
             KR  YTSS   VFY   N      +DE+ WSDV+  R  K      SY +SK   E AAL
Sbjct:   155 KRFFYTSSAVTVFYSGGNGGGGGEVDESVWSDVEVFRNQKEKRVSSSYVVSKMAAETAAL 214

Query:   181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDDV 239
             EF  ++GL++VTL+  +VVGPFI      SV  SLA++ GN +E  +L +T +MVH+DDV
Sbjct:   215 EFGGKNGLEVVTLVIPLVVGPFISSSLPSSVFISLAMLFGNYKEK-YLFDTYNMVHIDDV 273

Query:   240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
             ARA IFLLE P AKGRYICSS  + I E+ EFLS K+P++ +P+++
Sbjct:   274 ARAMIFLLEKPVAKGRYICSSVEMKIDEVFEFLSTKFPQFQLPSID 319

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0010422 "regulation of brassinosteroid biosynthetic process" evidence=IMP

GO:0016131 "brassinosteroid metabolic process" evidence=IMP

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

TAIR|locus:2165427 DFR "dihydroflavonol 4-reductase" [Arabidopsis thaliana (taxid:3702)]

 Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
 Identities = 136/285 (47%), Positives = 183/285 (64%)

Query:     1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             M   K  VCVTG +GFI SWL+MRLL+ GY V  TVR   DP   N K +  L +LP A 
Sbjct:     1 MVSQKETVCVTGASGFIGSWLVMRLLERGYFVRATVR---DPG--NLKKVQHLLDLPNAK 55

Query:    61 ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
               L ++ ADLS    +D AI GC GV HVATP+DFE K+PE  + +  +NG LGI+K+C+
Sbjct:    56 TLLTLWKADLSEEGSYDDAINGCDGVFHVATPMDFESKDPENEVIKPTVNGMLGIMKACV 115

Query:   121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERA 178
             K+ TV+R V+TSS   V   +   ++ DE  WSD+++I  +K+  W   Y +SKTL E+A
Sbjct:   116 KAKTVRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGW--MYFVSKTLAEKA 173

Query:   179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDD 238
             A +FAEE GLD +++IP++VVGPFI      S+ ++L+ I  N   Y  +     VH+DD
Sbjct:   174 AWDFAEEKGLDFISIIPTLVVGPFITTSMPPSLITALSPITRNEAHYSIIRQGQYVHLDD 233

Query:   239 VARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
             +  AHIFL E   AKGRYICSSH  TI  +++FL  KYPEY +P+
Sbjct:   234 LCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPS 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0042406 "extrinsic to endoplasmic reticulum membrane" evidence=TAS

GO:0009718 "anthocyanin-containing compound biosynthetic process" evidence=RCA;IMP;TAS

GO:0045552 "dihydrokaempferol 4-reductase activity" evidence=IMP;TAS

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0010224 "response to UV-B" evidence=RCA

TAIR|locus:2122093 DRL1 "dihydroflavonol 4-reductase-like1" [Arabidopsis thaliana (taxid:3702)]

 Score = 649 (233.5 bits), Expect = 1.2e-63, P = 1.2e-63
 Identities = 135/285 (47%), Positives = 184/285 (64%)

Query:     1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             M++ KG+VCVTG +GF+ASWL+ RLL  GY V  TVR   DP   N K L+ L  L GA 
Sbjct:     1 MDQAKGKVCVTGASGFLASWLVKRLLLEGYEVIGTVR---DPG--NEKKLAHLWKLEGAK 55

Query:    61 ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             ERLR+  ADL     FD AI GC GV H A+PV      PEE I + AI GTL +L+SC 
Sbjct:    56 ERLRLVKADLMEEGSFDNAIMGCQGVFHTASPVLKPTSNPEEEILRPAIEGTLNVLRSCR 115

Query:   121 KSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
             K+ ++KRVV TSS++ V   D D D    +DE+ W+ V+  ++   W   YA+SKTL E+
Sbjct:   116 KNPSLKRVVLTSSSSTVRIRD-DFDPKIPLDESIWTSVELCKRFQVW---YALSKTLAEQ 171

Query:   178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVD 237
             AA +F+EE+G+DLVT++PS +VGP + P    +    L L+ G  E++ +      VH+D
Sbjct:   172 AAWKFSEENGIDLVTVLPSFLVGPSLPPDLCSTASDVLGLLKGETEKFQWHGQMGYVHID 231

Query:   238 DVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
             DVAR HI + E+  A+GRYICSS+ ++++E+  FLSA+YP  PIP
Sbjct:   232 DVARTHIVVFEHEAAQGRYICSSNVISLEELVSFLSARYPSLPIP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0009555 "pollen development" evidence=IMP

GO:0048316 "seed development" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2195733 BAN "BANYULS" [Arabidopsis thaliana (taxid:3702)]

 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 124/289 (42%), Positives = 183/289 (63%)

Query:     4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
             G  + CV GGTG +AS LI  LL  GY V TTVR   DPE  N K ++ L+ L    + L
Sbjct:     9 GSKKACVIGGTGNLASILIKHLLQSGYKVNTTVR---DPE--NEKKIAHLRKLQELGD-L 62

Query:    64 RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
             +IF ADL+  D F+++ +GC  + HVATP++F+ ++PE+ + + AI G + +LKSCLKS 
Sbjct:    63 KIFKADLTDEDSFESSFSGCEYIFHVATPINFKSEDPEKDMIKPAIQGVINVLKSCLKSK 122

Query:   124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAA 179
             +VKRV+YTSS AAV  N+      +M+E  W+DV+++   K  +WG  Y ISK L E+ A
Sbjct:   123 SVKRVIYTSSAAAVSINNLSGTGIVMNEENWTDVEFLTEEKPFNWG--YPISKVLAEKTA 180

Query:   180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR------EEYGFLLNT-S 232
              EFA+E+ ++LVT+IP+++ G  +      S+  S++ I G        +E   L  + S
Sbjct:   181 WEFAKENKINLVTVIPALIAGNSLLSDPPSSLSLSMSFITGKEMHVTGLKEMQKLSGSIS 240

Query:   233 MVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPI 281
              VHVDD+ARAH+FL E   A GRYIC ++  ++ E+A+FL  +YP+Y +
Sbjct:   241 FVHVDDLARAHLFLAEKETASGRYICCAYNTSVPEIADFLIQRYPKYNV 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0033729 "anthocyanidin reductase activity" evidence=IDA

GO:0009964 "negative regulation of flavonoid biosynthetic process" evidence=IMP

GO:0016491 "oxidoreductase activity" evidence=ISS

TAIR|locus:2150315 AT5G19440 [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 124/284 (43%), Positives = 162/284 (57%)

Query:     4 GKGRV-CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
             G+G+V CVTG +G+IASWL+  LL  GY+V  +VR   DP     K    L +L GA ER
Sbjct:     5 GEGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDP-----KKTQHLVSLEGAKER 59

Query:    63 LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             L +F ADL     FD+AI GC GV H A+P   + K+P+  +   A+ GTL +L SC K+
Sbjct:    60 LHLFKADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKA 119

Query:   123 GTVKRVVYTSSNAAVFYNDK----DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
              +VKRVV TSS AAV YN K    DV + DET++SD +       W   Y +SKTL E A
Sbjct:   120 SSVKRVVVTSSMAAVGYNGKPRTPDVTV-DETWFSDPELCEASKMW---YVLSKTLAEDA 175

Query:   179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDD 238
             A + A+E GLD+VT+ P+MV+GP + P    S  + L LI G +      L+   V+V D
Sbjct:   176 AWKLAKEKGLDIVTINPAMVIGPLLQPTLNTSAAAILNLINGAKTFPN--LSFGWVNVKD 233

Query:   239 VARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
             VA AHI   E P A GRY      +   E+   L   YP  P+P
Sbjct:   234 VANAHIQAFEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLP 277

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2033904 AT1G51410 [Arabidopsis thaliana (taxid:3702)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 121/285 (42%), Positives = 167/285 (58%)

Query:     2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
             EE K  VCVTG +G+IASW++  LL  GY+V  +VR   DP  R ++ L  L+   GA E
Sbjct:     4 EEEK-TVCVTGASGYIASWIVKLLLLRGYTVKASVRDPNDP--RKTEHLLALE---GAEE 57

Query:    62 RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
             RL++F A+L     FD+AI GC GV H A+P   + K+P+  +   A+ GT+ +L SCLK
Sbjct:    58 RLKLFKANLLEEGSFDSAIDGCEGVFHTASPFYHDVKDPQAELLDPAVKGTINVLSSCLK 117

Query:   122 SGTVKRVVYTSSNAAVFYNDKD---VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
             + +VKRVV TSS AAV +N        ++DET+++D DY R    W   Y +SKTL E A
Sbjct:   118 TSSVKRVVLTSSIAAVAFNGMPRTPETIVDETWFADPDYCRASKLW---YVLSKTLAENA 174

Query:   179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVD 237
             A +FA+E+ L LV++ P+MV+GP + P    S  + L+LI G +    F   T   V+V 
Sbjct:   175 AWKFAKENNLQLVSINPAMVIGPLLQPTLNTSAAAVLSLIKGAQT---FPNATFGWVNVK 231

Query:   238 DVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
             DVA AHI   E PDA GRY          E+   L   YP++ +P
Sbjct:   232 DVANAHIQAFENPDADGRYCLVERVAHYSEVVNILHDLYPDFQLP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

GO:0048610 "cellular process involved in reproduction" evidence=RCA

GO:0048868 "pollen tube development" evidence=RCA

TAIR|locus:2201272 TKPR2 "tetraketide alpha-pyrone reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
 Identities = 116/275 (42%), Positives = 157/275 (57%)

Query:    10 VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
             VTGGTGFIAS++I  LL+ G++V TTVR+  D E      + FL    GA +RL+I  AD
Sbjct:     6 VTGGTGFIASYIIKSLLELGHTVRTTVRNPRDEEK-----VGFLWEFQGAKQRLKILQAD 60

Query:    70 LSHPDGFDAAIAGCTGVLHVATPVDF-EDKEPEEVITQRAINGTLGILKSCLKS-GTVKR 127
             L+    FD A+ G  GV H A+PV   +D   +E +    I GT  ++ SC KS  T+KR
Sbjct:    61 LTVEGSFDEAVNGVDGVFHTASPVLVPQDHNIQETLVDPIIKGTTNVMSSCAKSKATLKR 120

Query:   128 VVYTSSNAAVFYN-DK-DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
             +V TSS +++ Y  D  +   ++E+ WSD +Y ++ + W   Y  +KTL ER A   AEE
Sbjct:   121 IVLTSSCSSIRYRFDATEASPLNESHWSDPEYCKRFNLW---YGYAKTLGEREAWRIAEE 177

Query:   186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
              GLDLV + PS VVGP + PK   ++   LA+  G   EY        VH+DDV  AH+ 
Sbjct:   178 KGLDLVVVNPSFVVGPLLGPKPTSTLLMILAIAKGLAGEYPNF-TVGFVHIDDVVAAHVL 236

Query:   246 LLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYP 280
              +E P A GR ICSS      E+ E +  KYP YP
Sbjct:   237 AMEEPKASGRIICSSSVAHWSEIIELMRNKYPNYP 271

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

GO:0010584 "pollen exine formation" evidence=IMP

GO:0080110 "sporopollenin biosynthetic process" evidence=IMP

TAIR|locus:2051018 CRL2 "CCR(Cinnamoyl coA:NADP oxidoreductase)-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
 Identities = 121/283 (42%), Positives = 168/283 (59%)

Query:     5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
             KG+VCVTG  GF+ SW++  LL   Y V  TVR   DP   N K  + LK L  A ++L+
Sbjct:     6 KGKVCVTGAGGFLGSWVVNHLLSRDYFVHGTVR---DPG--NEK-YAHLKKLDKAGDKLK 59

Query:    65 IFHADLSHPDGFDAAIAGCTGVLHVATPVDFED-KEPEEVITQRAINGTLGILKSCLKSG 123
             +F ADL +     +AIAGC+GV HVA PV       PE  +   A++GTL +LK+C+++ 
Sbjct:    60 LFKADLLNYGSLQSAIAGCSGVFHVACPVPSASVPNPEVDLIAPAVDGTLNVLKACVEA- 118

Query:   124 TVKRVVYTSSNAAVFYND--KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
              VKRVVY SS +AV  N       ++DET WSD DY +K ++W   Y++SKT  E  A E
Sbjct:   119 KVKRVVYVSSVSAVAMNPMWSKSQVLDETAWSDQDYCKKTENW---YSLSKTRAESEAFE 175

Query:   182 FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS--MVHVDDV 239
             FA+  GLDLV++ P++V+GP +      +  SSL L+   +E Y    N    +V V DV
Sbjct:   176 FAKRTGLDLVSVCPTLVLGPVLQQHTVNA--SSLVLLKLLKEGYESRNNQERHLVDVRDV 233

Query:   240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
             A+A + + E  +A+GRYIC  HT+  QE+AE L + Y  Y  P
Sbjct:   234 AQALLLVYEKAEAEGRYICIGHTVREQEVAEKLKSLYLNYNYP 276

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

TAIR|locus:2033394 AT1G66800 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 110/276 (39%), Positives = 161/276 (58%)

Query:     4 GKGRV-CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
             G+G+V CVTG +G+IASW++  LL  GY+V  TVR+ +D     +K  + L  L GASER
Sbjct:     3 GEGKVVCVTGASGYIASWIVKLLLLRGYTVRATVRNPMD-----TKKTNHLLTLEGASER 57

Query:    63 LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             L++F +DL     FD AI GC GV H A+PV     +P+  +   A+NGTL +L++C K 
Sbjct:    58 LKLFKSDLLEEGSFDQAIEGCDGVFHTASPVSLTVTDPQTEMIDPAVNGTLNVLRTCAKV 117

Query:   123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
              +VKRV+ TSS AA    + + D++DET ++D+     + +W   Y  SKTL E  A  F
Sbjct:   118 SSVKRVIVTSSTAATLSINPN-DVVDETVFTDLSVYLAMKAW---YGYSKTLAEETAWRF 173

Query:   183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA 242
             A+E+G+DLV + P  V+GP + P    SV   + LI G      F      + V DV+ A
Sbjct:   174 AKENGIDLVVMNPGNVIGPVLQPTLNYSVEVIVDLINGKNPSNSFYYR--FMDVRDVSLA 231

Query:   243 HIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE 278
             HI   E P A GRYI +   +T++++ + L   +P+
Sbjct:   232 HIKAFEVPSASGRYILADPDVTMKDIQKLLHELFPD 267

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=ISS

GO:0050662 "coenzyme binding" evidence=IEA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=ISS

TAIR|locus:2056171 AT2G02400 [Arabidopsis thaliana (taxid:3702)]

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 109/282 (38%), Positives = 163/282 (57%)

Query:     5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
             K  VCVTG  GFI SW+I  L++ GY   T + + + P      D + L  LPG+  +++
Sbjct:     3 KETVCVTGANGFIGSWIIRTLIEKGY---TKIHASIYP----GSDPTHLLQLPGSDSKIK 55

Query:    65 IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSCLKSG 123
             IF ADL   D    AI GC GV HVA+P   +   +PE+ + + A+ GT+ +L++  K  
Sbjct:    56 IFEADLLDSDAISRAIDGCAGVFHVASPCTLDPPVDPEKELVEPAVKGTINVLEAA-KRF 114

Query:   124 TVKRVVYTSSNAAVFYNDKDVDMM--DETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
              V+RVV TSS +A+  N    + +  DE+ WSD+D+ +    W   Y ISKTL E+AA E
Sbjct:   115 NVRRVVITSSISALVPNPNWPEKVPVDESSWSDLDFCKSRQKW---YPISKTLAEKAAWE 171

Query:   182 FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE--EYGFLLNTSMVHVDDV 239
             F+E+HG ++VT+ PS  +GP + P    S    L L+ G+ E  E+ +L    +VHV DV
Sbjct:   172 FSEKHGTNIVTIHPSTCLGPLLQPNLNASCAVLLQLLQGSTETQEHHWL---GVVHVKDV 228

Query:   240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPI 281
             A+ H+ L E PDA GR++C++      E A  +S  +PE+ +
Sbjct:   229 AKGHVMLFETPDASGRFLCTNGIYQFSEFAALVSKLFPEFAV 270

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=ISS

GO:0016621 "cinnamoyl-CoA reductase activity" evidence=ISS

GO:0044237 "cellular metabolic process" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pm.C_LG_II0668 hypothetical protein (327 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	285
cd08958	293	cd08958, FR_SDR_e, flavonoid reductase (FR), exten	1e-141
PLN02650	351	PLN02650, PLN02650, dihydroflavonol-4-reductase	1e-108
cd05193	295	cd05193, AR_like_SDR_e, aldehyde reductase, flavon	3e-89
PLN00198	338	PLN00198, PLN00198, anthocyanidin reductase; Provi	5e-89
PLN02662	322	PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase	2e-79
PLN02896	353	PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase	8e-73
cd05227	301	cd05227, AR_SDR_e, aldehyde reductase, extended (e	6e-71
PLN02986	322	PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase	2e-61
PLN02989	325	PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase	2e-56
PLN02214	342	PLN02214, PLN02214, cinnamoyl-CoA reductase	3e-56
COG0451	314	COG0451, WcaG, Nucleoside-diphosphate-sugar epimer	8e-39
cd05228	318	cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr	2e-38
PLN02583	297	PLN02583, PLN02583, cinnamoyl-CoA reductase	5e-34
TIGR03466	328	TIGR03466, HpnA, hopanoid-associated sugar epimera	2e-30
PLN02686	367	PLN02686, PLN02686, cinnamoyl-CoA reductase	6e-29
pfam01370	233	pfam01370, Epimerase, NAD dependent epimerase/dehy	8e-29
cd08946	200	cd08946, SDR_e, extended (e) SDRs	4e-24
cd05256	304	cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e	5e-20
cd05232	303	cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase,	2e-18
pfam01073	280	pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr	6e-17
cd05263	293	cd05263, MupV_like_SDR_e, Pseudomonas fluorescens	7e-17
cd05257	316	cd05257, Arna_like_SDR_e, Arna decarboxylase_like,	8e-15
cd05241	331	cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d	2e-14
cd05271	273	cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub	3e-14
cd09813	335	cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD	4e-14
cd09811	354	cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD	3e-13
cd05265	250	cd05265, SDR_a1, atypical (a) SDRs, subgroup 1	3e-13
cd05262	291	cd05262, SDR_a7, atypical (a) SDRs, subgroup 7	9e-13
pfam07993	245	pfam07993, NAD_binding_4, Male sterility protein	2e-12
cd05264	300	cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase	2e-11
cd05260	316	cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase	3e-11
cd05243	203	cd05243, SDR_a5, atypical (a) SDRs, subgroup 5	4e-11
cd05242	296	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	5e-11
cd05240	306	cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase	2e-10
TIGR04180	297	TIGR04180, EDH_00030, NAD dependent epimerase/dehy	4e-10
cd05239	300	cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, exte	4e-09
cd05235	290	cd05235, SDR_e1, extended (e) SDRs, subgroup 1	2e-08
cd05246	315	cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra	2e-08
cd05234	305	cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase,	2e-08
pfam13460	182	pfam13460, NAD_binding_10, NADH(P)-binding	2e-08
cd05247	323	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase,	3e-08
COG3320	382	COG3320, COG3320, Putative dehydrogenase domain of	5e-08
cd05251	242	cd05251, NmrA_like_SDR_a, NmrA (a transcriptional	9e-08
cd05236	320	cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F	1e-07
TIGR01746	367	TIGR01746, Thioester-redct, thioester reductase do	1e-07
cd05230	305	cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase	1e-07
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	2e-07
cd05266	251	cd05266, SDR_a4, atypical (a) SDRs, subgroup 4	5e-07
cd05273	328	cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-	1e-06
cd05245	293	cd05245, SDR_a2, atypical (a) SDRs, subgroup 2	1e-06
cd05238	305	cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n	1e-06
TIGR01777	291	TIGR01777, yfcH, TIGR01777 family protein	2e-06
cd05269	272	cd05269, TMR_SDR_a, triphenylmethane reductase (TM	2e-06
COG1087	329	COG1087, GalE, UDP-glucose 4-epimerase [Cell envel	2e-06
cd05226	176	cd05226, SDR_e_a, Extended (e) and atypical (a) SD	2e-06
COG0702	275	COG0702, COG0702, Predicted nucleoside-diphosphate	3e-06
cd09812	339	cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid	1e-05
PLN02240	352	PLN02240, PLN02240, UDP-glucose 4-epimerase	3e-05
COG1090	297	COG1090, COG1090, Predicted nucleoside-diphosphate	4e-05
cd05252	336	cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydrata	2e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-04
PLN02427	386	PLN02427, PLN02427, UDP-apiose/xylose synthase	3e-04
cd05231	259	cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript	7e-04
cd08957	307	cd08957, WbmH_like_SDR_e, Bordetella bronchiseptic	7e-04
PRK10675	338	PRK10675, PRK10675, UDP-galactose-4-epimerase; Pro	0.001
pfam08659	181	pfam08659, KR, KR domain	0.001
cd05254	280	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4	0.002
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	0.002
cd05233	234	cd05233, SDR_c, classical (c) SDRs	0.002
cd08947	224	cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio	0.003
cd05244	207	cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu	0.003

>gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs

 Score =  397 bits (1023), Expect = e-141
 Identities = 150/280 (53%), Positives = 194/280 (69%), Gaps = 15/280 (5%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+ RLL  GY+V  TVR   DP   + K ++ L  L GA ERL++F 
Sbjct: 1   VCVTGASGFIGSWLVKRLLQRGYTVRATVR---DPG--DEKKVAHLLELEGAKERLKLFK 55

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL     FDAAI GC GV HVA+PVDF+ ++PEE + + A+ GTL +L++C K+ +VKR
Sbjct: 56  ADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPAVKGTLNVLEACAKAKSVKR 115

Query: 128 VVYTSSNAAVFYND--KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           VV+TSS AAV +N    +  ++DE+ WSD+D+ +K   W   YA+SKTL E+AA EFAEE
Sbjct: 116 VVFTSSVAAVVWNPNRGEGKVVDESCWSDLDFCKKTKLW---YALSKTLAEKAAWEFAEE 172

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY--GFLLNTSMVHVDDVARAH 243
           +GLDLVT+ PS+VVGPF+ P    S +  L+L+ GN E Y  G L   ++VHVDDVA AH
Sbjct: 173 NGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSL---ALVHVDDVADAH 229

Query: 244 IFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           I L E P A GRYICSSH +T  E+A  L+ KYP+Y IPT
Sbjct: 230 ILLYEKPSASGRYICSSHVVTRPELAALLAKKYPQYNIPT 269

This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase

 Score =  318 bits (816), Expect = e-108
 Identities = 139/283 (49%), Positives = 187/283 (66%), Gaps = 5/283 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M   K  VCVTG +GFI SWL+MRLL+ GY+V  TVR   DP   N K +  L +LPGA+
Sbjct: 1   MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVR---DPA--NVKKVKHLLDLPGAT 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
            RL ++ ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  +NG L I+K+C 
Sbjct: 56  TRLTLWKADLAVEGSFDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACA 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+ TV+R+V+TSS   V   +    + DE  WSD+D+ R+    G  Y +SKTL E+AA 
Sbjct: 116 KAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAW 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           ++A E+GLD +++IP++VVGPFI      S+ ++L+LI GN   Y  +     VH+DD+ 
Sbjct: 176 KYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLC 235

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            AHIFL E+P A+GRYICSSH  TI ++A+ L  KYPEY IP 
Sbjct: 236 NAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNIPA 278

Length = 351

>gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs

 Score =  267 bits (683), Expect = 3e-89
 Identities = 113/283 (39%), Positives = 156/283 (55%), Gaps = 15/283 (5%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG +GF+AS ++ +LL+ GY V  TVR   DP     K ++ L +L     RL +  
Sbjct: 1   VLVTGASGFVASHVVEQLLERGYKVRATVR---DPS--KVKKVNHLLDLDAKPGRLELAV 55

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD  I GC GV HVATPV F  K+P EVI   AI GTL  LK+   + +VKR
Sbjct: 56  ADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKP-AIGGTLNALKAAAAAKSVKR 114

Query: 128 VVYTSSNAAVFYNDKDVDMM--DETFWSDVDYIR--KLDSWGKSYAISKTLTERAALEFA 183
            V TSS  +V     +V+ +  DE  W+  ++    K  +W   YA SKTL E+AA +FA
Sbjct: 115 FVLTSSAGSVLIPKPNVEGIVLDEKSWNLEEFDSDPKKSAWV--YAASKTLAEKAAWKFA 172

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY-GFLLNTS--MVHVDDVA 240
           +E+ +DL+T+IP++ +G     +   S   +++LI GN        L      VHV D+ 
Sbjct: 173 DENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGYYVHVVDIC 232

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            AHI  LE P A+GRYIC++       + + L  KYP Y  PT
Sbjct: 233 LAHIGCLELPIARGRYICTAGNFDWNTLLKTLRKKYPSYTFPT 275

This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295

>gnl|CDD|215100 PLN00198, PLN00198, anthocyanidin reductase; Provisional

 Score =  267 bits (685), Expect = 5e-89
 Identities = 131/295 (44%), Positives = 183/295 (62%), Gaps = 27/295 (9%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           GK   CV GGTGF+AS LI  LL  GY+V TTVR   DPE  N K ++ L+ L    + L
Sbjct: 8   GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVR---DPE--NQKKIAHLRALQELGD-L 61

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
           +IF ADL+  + F+A IAGC  V HVATPV+F  ++PE  + + AI G   +LK+C K+ 
Sbjct: 62  KIFGADLTDEESFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAK 121

Query: 124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAA 179
           +VKRV+ TSS AAV  N       +M+E  W+DV+++   K  +WG  Y  SKTL E+AA
Sbjct: 122 SVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWG--YPASKTLAEKAA 179

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN--------- 230
            +FAEE+ +DL+T+IP+++ GP +      S+  +++LI GN     FL+N         
Sbjct: 180 WKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNE----FLINGLKGMQMLS 235

Query: 231 --TSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
              S+ HV+DV RAHIFL E   A GRYIC +   ++ E+A+FL  +YP+Y +PT
Sbjct: 236 GSISITHVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQYQVPT 290

Length = 338

>gnl|CDD|178268 PLN02662, PLN02662, cinnamyl-alcohol dehydrogenase family protein

 Score =  243 bits (621), Expect = 2e-79
 Identities = 121/288 (42%), Positives = 161/288 (55%), Gaps = 24/288 (8%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           EGK  VCVTG +G+IASWL+  LL  GY+V  TVR   DP     K    L  L GA ER
Sbjct: 3   EGK-VVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP-----KKTEHLLALDGAKER 56

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           L +F A+L     FD+ + GC GV H A+P   +  +P+  +   A+ GTL +L+SC K 
Sbjct: 57  LHLFKANLLEEGSFDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV 116

Query: 123 GTVKRVVYTSSNAAVFYNDK----DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
            +VKRVV TSS AAV YN K    DV ++DET++SD  +  +   W   Y +SKTL E A
Sbjct: 117 PSVKRVVVTSSMAAVAYNGKPLTPDV-VVDETWFSDPAFCEESKLW---YVLSKTLAEEA 172

Query: 179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR----EEYGFLLNTSMV 234
           A +FA+E+G+D+VT+ P+MV+GP + P    S  + L LI G +      Y +      V
Sbjct: 173 AWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRW------V 226

Query: 235 HVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP 282
            V DVA AHI   E P A GRY      +   E+ + L   YP   +P
Sbjct: 227 DVRDVANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLP 274

Length = 322

>gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase

 Score =  227 bits (579), Expect = 8e-73
 Identities = 118/294 (40%), Positives = 168/294 (57%), Gaps = 26/294 (8%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
           E   G  CVTG TG+I SWL+  LL  GY+V  T+R   DP     K L  L       +
Sbjct: 7   ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLR---DPA----KSLHLLSKWKEG-D 58

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFE----DKEPEEVITQR----AINGTL 113
           RLR+F ADL     FD A+ GC GV HVA  ++F+        EE +  +    AI GTL
Sbjct: 59  RLRLFRADLQEEGSFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTL 118

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYAI 170
            +LKSCLKS TVKRVV+TSS + +   D +      +DET  + +D++    + G  Y +
Sbjct: 119 NVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVL 178

Query: 171 SKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFL-- 228
           SK LTE AA ++A+E+G+DLV++I + V GPF+ P    S++  L+ I G+ + +  L  
Sbjct: 179 SKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSA 238

Query: 229 LNTSM-----VHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYP 277
           +N+ M     VH++D+  AHIFL+E   A+GRYIC   +  + E+   LS +YP
Sbjct: 239 VNSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYP 292

Length = 353

>gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs

 Score =  220 bits (563), Expect = 6e-71
 Identities = 103/289 (35%), Positives = 151/289 (52%), Gaps = 22/289 (7%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V VTG TGFIAS ++ +LL  GY V  TVRS      +++K  + LK   G ++RL   
Sbjct: 1   LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLS----KSAKLKALLKA-AGYNDRLEFV 55

Query: 67  HADL-SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             D  + P+ +D A+ G   V+HVA+P  F   + E+ +   A+ GTL +L++   +G+V
Sbjct: 56  IVDDLTAPNAWDEALKGVDYVIHVASPFPFTGPDAEDDVIDPAVEGTLNVLEAAKAAGSV 115

Query: 126 KRVVYTSSNAAVFY---NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           KRVV TSS AAV      D    +  E  W+D+   +        Y  SKTL E+AA EF
Sbjct: 116 KRVVLTSSVAAVGDPTAEDPGK-VFTEEDWNDLTISKSNGLDA--YIASKTLAEKAAWEF 172

Query: 183 AEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI--LGNREEYGFL--LNTSMVHV 236
            +E+    +L+T+ P  V+GP      A  + SS  LI  L + +       L    V V
Sbjct: 173 VKENKPKFELITINPGYVLGP---SLLADELNSSNELINKLLDGKLPAIPPNLPFGYVDV 229

Query: 237 DDVARAHIFLLEYPDAKG-RYICSSHTLTIQEMAEFLSAKYPEYPIPTV 284
            DVA AH+  LE P+A G R+I S+   + QE+A+ L  ++P+   P  
Sbjct: 230 RDVADAHVRALESPEAAGQRFIVSAGPFSFQEIADLLREEFPQLTAPFP 278

This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301

>gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein

 Score =  197 bits (501), Expect = 2e-61
 Identities = 115/288 (39%), Positives = 159/288 (55%), Gaps = 21/288 (7%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M  G   VCVTG +G+IASW++  LL  GY+V  TVR   D   R  K    L  L GA 
Sbjct: 1   MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVR---DLTDR--KKTEHLLALDGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           ERL++F ADL     F+ AI GC  V H A+PV F  K+P+  +   A+ GT+ +L +C 
Sbjct: 56  ERLKLFKADLLEESSFEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCK 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
           ++ +VKRV+ TSS AAV +    +   D++DETF+SD    R+  +W   Y +SK L E 
Sbjct: 116 ETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNW---YPLSKILAEN 172

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG----NREEYGFLLNTSM 233
           AA EFA+++G+D+V L P  + GP + P    SV   +  I G    N   Y F      
Sbjct: 173 AAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRF------ 226

Query: 234 VHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPI 281
           V V DVA AHI  LE P A GRYI     +++ ++ + L   +P+  I
Sbjct: 227 VDVRDVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCI 274

Length = 322

>gnl|CDD|178569 PLN02989, PLN02989, cinnamyl-alcohol dehydrogenase family protein

 Score =  184 bits (468), Expect = 2e-56
 Identities = 113/288 (39%), Positives = 162/288 (56%), Gaps = 20/288 (6%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M +G   VCVTG +G+IASW++  LL  GY++  TVR   DP+ R   D   L  L GA 
Sbjct: 1   MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVR---DPKDRKKTD--HLLALDGAK 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSC 119
           ERL++F ADL     F+ AI GC  V H A+PV    K +P+  +   A+NGT+ +L++C
Sbjct: 56  ERLKLFKADLLDEGSFELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTC 115

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWSDVDYIRKLDSWGKSYAISKTLTE 176
            K  +VKRV+ TSS AAV   +  +   D++DETF+++  +  +   W   Y +SKTL E
Sbjct: 116 TKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQW---YVLSKTLAE 172

Query: 177 RAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS---M 233
            AA  FA+++ +DL+ L P +V GP + P    SV   + L+ G         NT+    
Sbjct: 173 DAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNP-----FNTTHHRF 227

Query: 234 VHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPI 281
           V V DVA AH+  LE P A GRYI     +TI+++   L   +P+  I
Sbjct: 228 VDVRDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDLCI 275

Length = 325

>gnl|CDD|177862 PLN02214, PLN02214, cinnamoyl-CoA reductase

 Score =  184 bits (467), Expect = 3e-56
 Identities = 110/279 (39%), Positives = 162/279 (58%), Gaps = 19/279 (6%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG  G+IASW++  LL+ GY+V  TVR+  DP++      + L+ L G  ERL +  
Sbjct: 13  VCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKN------THLRELEGGKERLILCK 66

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL   +   AAI GC GV H A+PV     +PE+++ + A+NG   ++ +  ++  VKR
Sbjct: 67  ADLQDYEALKAAIDGCDGVFHTASPVT---DDPEQMV-EPAVNGAKFVINAAAEA-KVKR 121

Query: 128 VVYTSSNAAVFYNDKDVD---MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VV TSS  AV Y D + D   ++DE+ WSD+D+ +   +W   Y   K + E+AA E A+
Sbjct: 122 VVITSSIGAV-YMDPNRDPEAVVDESCWSDLDFCKNTKNW---YCYGKMVAEQAAWETAK 177

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
           E G+DLV L P +V+GP + P    S+   L  + G+ + Y  L   + V V DVA AH+
Sbjct: 178 EKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANL-TQAYVDVRDVALAHV 236

Query: 245 FLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            + E P A GRY+ +       E+ E L+  +PEYP+PT
Sbjct: 237 LVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLPT 275

Length = 342

>gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score =  137 bits (347), Expect = 8e-39
 Identities = 79/280 (28%), Positives = 111/280 (39%), Gaps = 33/280 (11%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTGG GFI S L+ RLL  G+ V    R   D        + F              
Sbjct: 2   RILVTGGAGFIGSHLVERLLAAGHDVRGLDRL-RDGLDPLLSGVEF-------------V 47

Query: 67  HADLSHPDGFDAAIAGC-TGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSG 123
             DL+  D  D    G    V+H+A      D    +      +N  GTL +L++   +G
Sbjct: 48  VLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG 107

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            VKR V+ SS + V Y D     +DE                  Y +SK   E+    +A
Sbjct: 108 -VKRFVFASSVSVV-YGDPPPLPIDED--------LGPPRPLNPYGVSKLAAEQLLRAYA 157

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-----SMVHVDD 238
             +GL +V L P  V GP   P  +  V S+    L   E    +          V+VDD
Sbjct: 158 RLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDD 217

Query: 239 VARAHIFLLEYPDAKGRYICSSHT-LTIQEMAEFLSAKYP 277
           VA A +  LE PD     I S    +T++E+AE ++    
Sbjct: 218 VADALLLALENPDGGVFNIGSGTAEITVRELAEAVAEAVG 257

Length = 314

>gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs

 Score =  137 bits (346), Expect = 2e-38
 Identities = 90/284 (31%), Positives = 118/284 (41%), Gaps = 44/284 (15%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTG TGF+ S L+  LL  GY V   VRS          D   L  LP     + +   D
Sbjct: 3   VTGATGFLGSNLVRALLAQGYRVRALVRS--------GSDAVLLDGLP-----VEVVEGD 49

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSGTVKR 127
           L+      AA+ GC  V H+A       K+ +E       N  GT  +L + L++G V+R
Sbjct: 50  LTDAASLAAAMKGCDRVFHLAAFTSLWAKDRKE---LYRTNVEGTRNVLDAALEAG-VRR 105

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           VV+TSS AA+         +DET   +             Y  SK L E   LE A E G
Sbjct: 106 VVHTSSIAALGGPPDGR--IDETTPWNERPFPND------YYRSKLLAELEVLEAAAE-G 156

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL-----NTSMVHVDDVARA 242
           LD+V + PS V GP       G    +   +       G L       TS V V DVA  
Sbjct: 157 LDVVIVNPSAVFGP-------GDEGPTSTGLDVLDYLNGKLPAYPPGGTSFVDVRDVAEG 209

Query: 243 HIFLLEYPDAKGRYICSSHTLTIQEMAEFLSA----KYPEYPIP 282
           HI  +E      RYI     L+ +++ E L+     K P   IP
Sbjct: 210 HIAAMEKGRRGERYILGGENLSFKQLFETLAEITGVKPPRRTIP 253

This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318

>gnl|CDD|178195 PLN02583, PLN02583, cinnamoyl-CoA reductase

 Score =  124 bits (314), Expect = 5e-34
 Identities = 80/282 (28%), Positives = 137/282 (48%), Gaps = 41/282 (14%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
            +E    VCV   +G++  WL+ RLL  GY+V   V+   + E    K++  L       
Sbjct: 2   FDESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQK--NGETEIEKEIRGLSC---EE 56

Query: 61  ERLRIFHADLSHPDGFD-----AAIAGCTGVLHVATPVDFEDKEPE---EVITQRAINGT 112
           ERL++F  D       D      A+ GC+G+     P        E   +V  + A N  
Sbjct: 57  ERLKVFDVDP-----LDYHSILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHN-- 109

Query: 113 LGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM---MDETFWSDVDYIRKLDSWGKSYA 169
             +L++C ++ T+++VV+TSS  AV + D ++     +DE  WSD ++ RK   W   +A
Sbjct: 110 --VLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLW---HA 164

Query: 170 ISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY--GF 227
           ++KTL+E+ A   A + G+++V++   +++GP        S+      + G  + Y  G 
Sbjct: 165 LAKTLSEKTAWALAMDRGVNMVSINAGLLMGP--------SLTQHNPYLKGAAQMYENGV 216

Query: 228 LLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMA 269
           L+    V V+ +  AHI   E   + GRY+C +H +  +E A
Sbjct: 217 LV---TVDVNFLVDAHIRAFEDVSSYGRYLCFNHIVNTEEDA 255

Length = 297

>gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase

 Score =  115 bits (291), Expect = 2e-30
 Identities = 100/286 (34%), Positives = 136/286 (47%), Gaps = 38/286 (13%)

Query: 6   GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            +V VTG TGF+ S ++  LL+ G  V   VR   D   RN      L+ L        I
Sbjct: 1   MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR--RN------LEGLDV-----EI 47

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSG 123
              DL  P     A+AGC  + HVA        +PEE+    A N  GT  +L++ L++G
Sbjct: 48  VEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEM---YAANVEGTRNLLRAALEAG 104

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            V+RVVYTSS A +     D    DET  S +D     D  G  Y  SK L E+AALE A
Sbjct: 105 -VERVVYTSSVATLGVR-GDGTPADETTPSSLD-----DMIG-HYKRSKFLAEQAALEMA 156

Query: 184 EEHGLDLVTLIPSMVVGPF-ICPKFAGSVRSSLALILGNREEYGFLLNT--SMVHVDDVA 240
            E GL +V + PS  +GP  I P   G  R  +  + G    Y   ++T  ++VHVDDVA
Sbjct: 157 AEKGLPVVIVNPSTPIGPRDIKPTPTG--RIIVDFLNGKMPAY---VDTGLNLVHVDDVA 211

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSA----KYPEYPIP 282
             H+  LE      RYI     LT++++ + L+       P   +P
Sbjct: 212 EGHLLALERGRIGERYILGGENLTLKQILDKLAEITGRPAPRVKLP 257

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328

>gnl|CDD|215370 PLN02686, PLN02686, cinnamoyl-CoA reductase

 Score =  112 bits (283), Expect = 6e-29
 Identities = 88/295 (29%), Positives = 135/295 (45%), Gaps = 55/295 (18%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTGG  F+   ++ RLL HGYSV   V ++        +D   L+ +    E  R   
Sbjct: 56  VCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQ--------EDKEKLREMEMFGEMGRSND 107

Query: 68  ------ADLSHPDGFDAAIAGCTGVLHVATPVD-------------FEDKEPEEVITQRA 108
                 A+L+ P+    A  GC GV H +  VD              E K  E VI    
Sbjct: 108 GIWTVMANLTEPESLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVI---- 163

Query: 109 INGTLGILKSCLKSGTVKRVVYTSSNAAVFYND---KDVD-MMDETFWSDVDYIRKLDSW 164
                   ++C+++ +V++ V+TSS  A  +      D+  ++DE  WSD  + R    W
Sbjct: 164 --------EACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLW 215

Query: 165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE 224
              YA+ K   E+AA   A   GL L T+ P++V GP     F  +  +++A + G +E 
Sbjct: 216 ---YALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF---FRRNSTATIAYLKGAQEM 269

Query: 225 YG-FLLNTSMVHVDDVARAHIFLLEYPDAK---GRYICSSHTLTIQEMAEFLSAK 275
               LL T    V+ +A AH+ + E    K   GRYIC  H ++ ++ AE L+ +
Sbjct: 270 LADGLLAT--ADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQ 322

Length = 367

>gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family

 Score =  109 bits (275), Expect = 8e-29
 Identities = 80/259 (30%), Positives = 114/259 (44%), Gaps = 39/259 (15%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTGGTGFI S L+ RLL  GY V    R       R S+           + R+R   
Sbjct: 1   ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRR------RRSE--------SLNTGRIRFHE 46

Query: 68  ADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            DL+ PD  +  +A      V+H+A  + V    ++P + I +  + GTL +L++  ++G
Sbjct: 47  GDLTDPDALERLLAEVQPDAVIHLAAQSGVGASFEDPADFI-RANVLGTLRLLEAARRAG 105

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            VKR V+ SS + V Y D     + E        +  L      YA +K   ER    +A
Sbjct: 106 -VKRFVFASS-SEV-YGDVADPPITED-----TPLGPLSP----YAAAKLAAERLVEAYA 153

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYGFLLNTSM-----VHVD 237
             +GL  V L    V GP     F   V  +L   IL  +     LL         ++VD
Sbjct: 154 RAYGLRAVILRLFNVYGPGNPDPFVTHVIPALIRRILEGKPIL--LLGDGTQRRDFLYVD 211

Query: 238 DVARAHIFLLEYPDAKGRY 256
           DVARA +  LE+PD    Y
Sbjct: 212 DVARAILLALEHPDGGEIY 230

This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233

>gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs

 Score = 96.2 bits (240), Expect = 4e-24
 Identities = 67/251 (26%), Positives = 97/251 (38%), Gaps = 59/251 (23%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTGG GFI S L+ RLL+ G+ V    R ++                        + H
Sbjct: 1   ILVTGGAGFIGSHLVRRLLERGHEVVVIDRLDV------------------------VVH 36

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
                     AA+ G          V      P+E   +  + GTL +L++  K+G VKR
Sbjct: 37  L---------AALVG----------VPASWDNPDEDF-ETNVVGTLNLLEAARKAG-VKR 75

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
            VY SS +   Y   +    +E          +  S    Y +SK   E     + E +G
Sbjct: 76  FVYASSASV--YGSPEGLPEEEE------TPPRPLS---PYGVSKLAAEHLLRSYGESYG 124

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE--YGFLLNT-SMVHVDDVARAHI 244
           L +V L  + V GP   P+  G V   +   L  +    +G    T   +HVDDV RA +
Sbjct: 125 LPVVILRLANVYGPGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAIL 184

Query: 245 FLLEYPDAKGR 255
             LE P   G 
Sbjct: 185 HALENPLEGGG 195

Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200

>gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs

 Score = 87.3 bits (217), Expect = 5e-20
 Identities = 75/283 (26%), Positives = 107/283 (37%), Gaps = 47/283 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV VTGG GFI S L+ RLL+ G+ V   V   L    +         NLP     ++  
Sbjct: 1   RVLVTGGAGFIGSHLVERLLERGHEV--IVLDNLSTGKKE--------NLPEVKPNVKFI 50

Query: 67  HADLSHPDGFDAAIAGCTGVLHVAT----PVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D+   +  + A  G   V H A     P   ED   +  +    + GTL +L++  K+
Sbjct: 51  EGDIRDDELVEFAFEGVDYVFHQAAQASVPRSIEDPIKDHEVN---VLGTLNLLEAARKA 107

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G VKR VY SS++   Y D      DE           L      YA+SK   E     F
Sbjct: 108 G-VKRFVYASSSSV--YGDPPYLPKDED-----HPPNPL----SPYAVSKYAGELYCQVF 155

Query: 183 AEEHGLDLVTLIPSMVVGP---------FICPKFAGSVRSSLALILGNREEYG--FLLNT 231
           A  +GL  V+L    V GP          + P F           +    E    F    
Sbjct: 156 ARLYGLPTVSLRYFNVYGPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDF---- 211

Query: 232 SMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLS 273
              +V+DV  A++           Y I +    ++ E+AE + 
Sbjct: 212 --TYVEDVVEANLLAATAGAGGEVYNIGTGKRTSVNELAELIR 252

This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304

>gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs

 Score = 83.2 bits (206), Expect = 2e-18
 Identities = 68/273 (24%), Positives = 102/273 (37%), Gaps = 49/273 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTG  GFI   L+ +LL  G  V   VR+                N   +       
Sbjct: 1   KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNAE--------------NAEPSVVL---- 42

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPV-DFEDKEPEEVITQRAIN--GTLGILKSCLKSG 123
            A+L   D F     G   V+H+A  V    D+  + +   R +N   T  + ++  + G
Sbjct: 43  -AELPDIDSFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAARQG 101

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            VKR V+ SS              +    +  D           Y  SK   ERA LE  
Sbjct: 102 -VKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDA----------YGRSKLEAERALLELG 150

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSS---LALILG---NREEYGFLLNTSMVHVD 237
              G+++V L P MV GP +   FA  +R     L L  G   NR         S+V +D
Sbjct: 151 ASDGMEVVILRPPMVYGPGVRGNFARLMRLIDRGLPLPPGAVKNRR--------SLVSLD 202

Query: 238 DVARAHIFLLEYPDAKGR-YICS-SHTLTIQEM 268
           ++  A    +  P A    ++ S    ++  E+
Sbjct: 203 NLVDAIYLCISLPKAANGTFLVSDGPPVSTAEL 235

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303

>gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family

 Score = 78.5 bits (194), Expect = 6e-17
 Identities = 70/283 (24%), Positives = 109/283 (38%), Gaps = 41/283 (14%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTGG GF+   ++  LL  G      VR   D          F K      + +     D
Sbjct: 2   VTGGGGFLGRHIVRLLLREGE--LQEVRV-FDLRFSPELLEDFSK-----LQVITYIEGD 53

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
           ++       A+ G   V+H A  +D   K   + I +  + GT  +L +C+K+G V+ +V
Sbjct: 54  VTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTIMKVNVKGTQNVLDACVKAG-VRVLV 112

Query: 130 YTSSNAAVFYNDKDVDMM--DETFWSDVDYIRKLDSWGKSYAISKTLTERAALE---FAE 184
           YTSS   V  N     ++  DET            +    Y  SK L E+  L+      
Sbjct: 113 YTSSMEVVGPNSYGQPIVNGDET-------TPYESTHQDPYPESKALAEKLVLKANGSTL 165

Query: 185 EHGLDLVT--LIPSMVVGP---FICPKFAGSVRSSLAL-ILGNREEYGFLLNTSMVHVDD 238
           ++G  L T  L P+ + G    F+ P     +++ LA    G++        +  V+V +
Sbjct: 166 KNGGRLYTCALRPAGIFGEGDPFLFPFLVRLLKNGLAKFRTGDKNVL-----SDRVYVGN 220

Query: 239 VARAHIFL---LEYPDAKGR-----YICSSHTLTIQEMAEFLS 273
           VA AHI     L+ P          Y  S  T       +F  
Sbjct: 221 VAWAHILAARALQDPKKASSIAGQFYFISDDT-PHNSYDDFNR 262

The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280

>gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs

 Score = 78.6 bits (194), Expect = 7e-17
 Identities = 70/285 (24%), Positives = 120/285 (42%), Gaps = 43/285 (15%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTGGTGF+   L+ RLL++G+ V   VRSE        +    ++     ++R+R+   D
Sbjct: 3   VTGGTGFLGRHLVKRLLENGFKVLVLVRSE-----SLGEAHERIEEAGLEADRVRVLEGD 57

Query: 70  LSHPD-GFDAA-----IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
           L+ P+ G  AA           V+H A   DF+   P E   +  I+GT  +L+   +  
Sbjct: 58  LTQPNLGLSAAASRELAGKVDHVIHCAASYDFQ--APNEDAWRTNIDGTEHVLELAARLD 115

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
             +R  Y S+ A V       +       ++++  +   +    Y  SK   E+     A
Sbjct: 116 I-QRFHYVST-AYV-----AGNREGNIRETELNPGQNFKNP---YEQSKAEAEQLVRAAA 165

Query: 184 EEHGLDLVTLIPSMVVGPFIC---PKFAGSVRSSLAL--------ILGNREEYGFLLNTS 232
            +  + L    PS+VVG        K  G       L        + GN+         +
Sbjct: 166 TQ--IPLTVYRPSIVVGDSKTGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARL-----N 218

Query: 233 MVHVDDVARAHIFLLEYPDAKGR--YICSSHTLTIQEMAEFLSAK 275
           +V VD VA A ++L + P+A G+  ++      T++E+A+   + 
Sbjct: 219 LVPVDYVADAIVYLSKKPEANGQIFHLTDPTPQTLREIADLFKSA 263

This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs

 Score = 72.7 bits (179), Expect = 8e-15
 Identities = 72/280 (25%), Positives = 107/280 (38%), Gaps = 34/280 (12%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS-ERLRI 65
            V VTG  GFI S L  RLL  G+ V       LD    NS +   L  L  A  +R   
Sbjct: 1   NVLVTGADGFIGSHLTERLLREGHEVRA-----LD--IYNSFNSWGL--LDNAVHDRFHF 51

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
              D+      +  +  C  V H+A    + +    P   + +  + GTL +L++     
Sbjct: 52  ISGDVRDASEVEYLVKKCDVVFHLAALIAIPYSYTAPLSYV-ETNVFGTLNVLEAACVLY 110

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
             KRVV+TS++    Y       +DE     + YI K  S    Y+ SK   +R A  + 
Sbjct: 111 -RKRVVHTSTSEV--YGTAQDVPIDED--HPLLYINKPRS---PYSASKQGADRLAYSYG 162

Query: 184 EEHGLDLVTLIPSMVVGPFICP-KFAGSVRSSLAL-----ILGNREEYGFLLNTSMVHVD 237
              GL +  + P    GP         ++ S  A+      LG+              V 
Sbjct: 163 RSFGLPVTIIRPFNTYGPRQSARAVIPTIISQRAIGQRLINLGDGSPT-----RDFNFVK 217

Query: 238 DVARAHIFLLEYPDAKGRYI--CSSHTLTIQEMAEFLSAK 275
           D AR  I +L+  +A G  I   S   ++I   A  L  +
Sbjct: 218 DTARGFIDILDAIEAVGEIINNGSGEEISIGNPAVELIVE 257

Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs

 Score = 71.7 bits (176), Expect = 2e-14
 Identities = 57/244 (23%), Positives = 93/244 (38%), Gaps = 34/244 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V VTGG+GF    L+ +LL+ G    T VRS  D         +           +   
Sbjct: 1   SVLVTGGSGFFGERLVKQLLERG---GTYVRS-FD---IAPPGEALSAWQH---PNIEFL 50

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D++  +  + A++G   V H A  V      P ++  +  + GT  +L +C + G V+
Sbjct: 51  KGDITDRNDVEQALSGADCVFHTAAIVPLA--GPRDLYWEVNVGGTQNVLDACQRCG-VQ 107

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           + VYTSS+ +V +  +++   DET       +         YA +K + E   LE     
Sbjct: 108 KFVYTSSS-SVIFGGQNIHNGDET-------LPYPPLDSDMYAETKAIAEIIVLEANGRD 159

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL------GNREEYGFLLNTSMVHVDDVA 240
            L    L P+ + GP         +       L             F       +V ++A
Sbjct: 160 DLLTCALRPAGIFGPG-DQGLVPILFEWAEKGLVKFVFGRGNNLVDF------TYVHNLA 212

Query: 241 RAHI 244
            AHI
Sbjct: 213 HAHI 216

Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331

>gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs

 Score = 70.7 bits (174), Expect = 3e-14
 Identities = 65/295 (22%), Positives = 104/295 (35%), Gaps = 75/295 (25%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V V G TGFI  +++ RL   G  V    R E       ++ L  + +L      +   
Sbjct: 2   VVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE-----AYARRLLVMGDLGQ----VLFV 52

Query: 67  HADLSHPDGFDAAIAG------CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             DL   +    A+ G        G L+      FED           + G   + K+  
Sbjct: 53  EFDLRDDESIRKALEGSDVVINLVGRLYETKNFSFEDVH---------VEGPERLAKAAK 103

Query: 121 KSGTVKRVVYTSS-NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           ++G V+R+++ S+  A       D +       S   Y+R           SK   E A 
Sbjct: 104 EAG-VERLIHISALGA-------DAN-------SPSKYLR-----------SKAEGEEAV 137

Query: 180 LEFAEEHGLDLVTLIPSMVVGP---FICPKFAGSVRSSLALILGNREEYGFLLNTSM--- 233
            E   E       + PS+V G    F+  +FA  + + L                +    
Sbjct: 138 REAFPEA----TIVRPSVVFGREDRFLN-RFA-KLLAFLPFPP------LIGGGQTKFQP 185

Query: 234 VHVDDVARAHIFLLEYPDAKGR--YICSSHTLTIQEMAEFLSA----KYPEYPIP 282
           V+V DVA A    L+ P+ +G+   +      T+ E+ E L      K    P+P
Sbjct: 186 VYVGDVAEAIARALKDPETEGKTYELVGPKVYTLAELVELLRRLGGRKRRVLPLP 240

This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273

>gnl|CDD|187673 cd09813, 3b-HSD-NSDHL-like_SDR_e, human NSDHL (NAD(P)H steroid dehydrogenase-like protein)-like, extended (e) SDRs

 Score = 71.2 bits (175), Expect = 4e-14
 Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 37/246 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              V GG+GF+   L+ +LL  G     TV    D            +  P +S R++  
Sbjct: 1   SCLVVGGSGFLGRHLVEQLLRRG---NPTVHV-FDIRPT-------FELDPSSSGRVQFH 49

Query: 67  HADLSHPDGFDAAI--AGCTGVLHVATPVDFEDKEP-EEVITQRAINGTLGILKSCLKSG 123
             DL+ P   + A    G   V H A+P    + +   +V  Q    GT  ++++C K G
Sbjct: 50  TGDLTDPQDLEKAFNEKGPNVVFHTASPDHGSNDDLYYKVNVQ----GTRNVIEACRKCG 105

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF- 182
            VK++VYTSS A+V +N +D+   DE+      Y  K      +Y  +K L E+  L+  
Sbjct: 106 -VKKLVYTSS-ASVVFNGQDIINGDESL----PYPDKHQD---AYNETKALAEKLVLKAN 156

Query: 183 AEEHGLDLVTLIPSMVVGP---FICPKFAGSVRSSLA-LILGNREEYGFLLNTSMVHVDD 238
             E GL    L P+ + GP    + P    + ++      +G+             +V++
Sbjct: 157 DPESGLLTCALRPAGIFGPGDRQLVPGLLKAAKNGKTKFQIGDGNNLF-----DFTYVEN 211

Query: 239 VARAHI 244
           VA AHI
Sbjct: 212 VAHAHI 217

This subgroup includes human NSDHL and related proteins. These proteins have the characteristic active site tetrad of extended SDRs, and also have a close match to their NAD(P)-binding motif. Human NSDHL is a 3beta-hydroxysteroid dehydrogenase (3 beta-HSD) which functions in the cholesterol biosynthetic pathway. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Mutations in the gene encoding NSDHL cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. This subgroup also includes an unusual bifunctional [3beta-hydroxysteroid dehydrogenase (3b-HSD)/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 335

>gnl|CDD|187671 cd09811, 3b-HSD_HSDB1_like_SDR_e, human 3beta-HSD (hydroxysteroid dehydrogenase) and HSD3B1(delta 5-delta 4-isomerase)-like, extended (e) SDRs

 Score = 68.7 bits (168), Expect = 3e-13
 Identities = 67/255 (26%), Positives = 97/255 (38%), Gaps = 46/255 (18%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE------RL 63
           VTGG GF+   +I  LL+         R E   E R   D +F   L    E       +
Sbjct: 4   VTGGGGFLGQHIIRLLLE---------RKEELKEIR-VLDKAFGPELIEHFEKSQGKTYV 53

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
                D+        A  G + V+H A  VD       E + +  +NGT  +L++C+++ 
Sbjct: 54  TDIEGDIKDLSFLFRACQGVSVVIHTAAIVDVFGPPNYEELEEVNVNGTQAVLEACVQNN 113

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE-- 181
            VKR+VYTSS      N K         ++ V+     D+    YA SK L E   L   
Sbjct: 114 -VKRLVYTSSIEVAGPNFK-----GRPIFNGVEDTPYEDTSTPPYASSKLLAENIVLNAN 167

Query: 182 -FAEEHGLDLVT--LIPSMVVG---PFI------CPKFAGSVRSSLALILGNREEYGFLL 229
               + G  LVT  L P  + G    F+           G +   +     N        
Sbjct: 168 GAPLKQGGYLVTCALRPMYIYGEGSHFLTEIFDFLLTNNGWLFPRIKGSGVN-------- 219

Query: 230 NTSMVHVDDVARAHI 244
              +V+V +VA AHI
Sbjct: 220 --PLVYVGNVAWAHI 232

This extended-SDR subgroup includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7], and related proteins. These proteins have the characteristic active site tetrad and NAD(P)-binding motif of extended SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. C(27) 3beta-HSD is a membrane-bound enzyme of the endoplasmic reticulum, it catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 354

>gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1

 Score = 67.3 bits (165), Expect = 3e-13
 Identities = 52/254 (20%), Positives = 79/254 (31%), Gaps = 47/254 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + GGT FI   L+  LL  G+ VT          +R               E +   
Sbjct: 2   KILIIGGTRFIGKALVEELLAAGHDVTVF--------NRGRTKPDL-------PEGVEHI 46

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D +  D  +  + G      V   VD     P +V         L   K     G VK
Sbjct: 47  VGDRNDRDALEELLGG--EDFDVV--VDTIAYTPRQVER------ALDAFK-----GRVK 91

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           + ++ SS +   Y      + + T   + D +   D W   Y   K   E       E  
Sbjct: 92  QYIFISSASV--YLKPGRVITESTPLREPDAVGLSDPW--DYGRGKRAAEDVL---IEAA 144

Query: 187 GLDLVTLIPSMVVGPF-ICPKFAGSVRSSLA----LILGNREEYGFLLNTSMVHVDDVAR 241
                 + P  + GP     + A            L+ G+            +HV D+AR
Sbjct: 145 AFPYTIVRPPYIYGPGDYTGRLAYFFDRLARGRPILVPGDGH-----SLVQFIHVKDLAR 199

Query: 242 AHIFLLEYPDAKGR 255
           A +     P A G 
Sbjct: 200 ALLGAAGNPKAIGG 213

Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250

>gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7

 Score = 66.6 bits (163), Expect = 9e-13
 Identities = 70/286 (24%), Positives = 107/286 (37%), Gaps = 50/286 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTG TGFI S ++  L+  G+ V    RS+       +  L       GA     + 
Sbjct: 2   KVFVTGATGFIGSAVVRELVAAGHEVVGLARSD-----AGAAKLE----AAGAQ----VH 48

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             DL   D    A A    V+H+A   DF++      + +RAI      L+     GT K
Sbjct: 49  RGDLEDLDILRKAAAEADAVIHLAFTHDFDNFAQACEVDRRAIEALGEALR-----GTGK 103

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
            ++YTS               DE      D              ++ ++E AALE AE  
Sbjct: 104 PLIYTSGIW--LLGPTGGQEEDE---EAPD--------DPPTPAARAVSEAAALELAERG 150

Query: 187 GLDLVTLIPSMVVGP----FICPKFAGSVRSSLALILG---NREEYGFLLNTSMVHVDDV 239
               V  +P +V G     F+    A +    ++  +G   NR           VH DD 
Sbjct: 151 VRASVVRLPPVVHGRGDHGFVPMLIAIAREKGVSAYVGDGKNR--------WPAVHRDDA 202

Query: 240 ARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPEYPIPTV 284
           AR +   LE   A   Y       + ++++AE +  +     +P V
Sbjct: 203 ARLYRLALEKGKAGSVYHAVAEEGIPVKDIAEAIGRR---LGVPVV 245

This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291

>gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein

 Score = 64.9 bits (159), Expect = 2e-12
 Identities = 65/258 (25%), Positives = 97/258 (37%), Gaps = 39/258 (15%)

Query: 10  VTGGTGFIASWLIMRLLD--HGYSVTTTVR--SELDPEHRNSKDL--SFLKNLPGASERL 63
           +TG TGF+   L+ +LL       +   VR         R  ++L    L +   A ER+
Sbjct: 1   LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGESALERLRQELLKYGLFDRLKALERI 60

Query: 64  RIFHADLSHPD-GFDAA----IAGCTG-VLHVATPVDFEDKEPEEVITQRAIN--GTLGI 115
                DLS P+ G        +A     ++H A  V+F   EP   +  RA N  GT  +
Sbjct: 61  IPVAGDLSEPNLGLSDEDFQELAEEVDVIIHNAATVNFV--EPYSDL--RATNVLGTREV 116

Query: 116 LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLT 175
           L+   K        + S+  A    ++   + ++ +  D D    L      Y  SK L 
Sbjct: 117 LRLA-KQMKKLPFHHVST--AYVNGERGGLLEEKPYKLDEDEPALLGGLPNGYTQSKWLA 173

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVGP----------FICPKFAGSV-RSSLALILGNREE 224
           E+   E A   GL +V   PS++ G           F      G      L  ILG+ + 
Sbjct: 174 EQLVREAAG--GLPVVIYRPSIITGESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDA 231

Query: 225 YGFLLNTSMVHVDDVARA 242
                   +V VD VA A
Sbjct: 232 -----RLDLVPVDYVANA 244

This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245

>gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs

 Score = 63.1 bits (154), Expect = 2e-11
 Identities = 67/272 (24%), Positives = 109/272 (40%), Gaps = 41/272 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV + GG GFI S L+  LL+ G  V    RS    E      L  +  + G  E     
Sbjct: 1   RVLIVGGNGFIGSHLVDALLEEGPQVRVFDRSIPPYE----LPLGGVDYIKGDYENR--- 53

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA---TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            ADL       +A+ G   V+H+A    P         ++  Q  +  T+ +L++C  +G
Sbjct: 54  -ADLE------SALVGIDTVIHLASTTNPATSNKNPILDI--QTNVAPTVQLLEACAAAG 104

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            + ++++ SS   V Y   +   + E+     D    +     SY ISK   E+    + 
Sbjct: 105 -IGKIIFASSGGTV-YGVPEQLPISES-----DPTLPI----SSYGISKLAIEKYLRLYQ 153

Query: 184 EEHGLDLVTLIPSMVVGPFICP-KFAGSVRSSLALILGNR--EEYGFLLNTSMV----HV 236
             +GLD   L  S   GP   P    G +  +L  IL     E +G   +   +    ++
Sbjct: 154 YLYGLDYTVLRISNPYGPGQRPDGKQGVIPIALNKILRGEPIEIWG---DGESIRDYIYI 210

Query: 237 DDVARAHIFLLEYPDAKGRY-ICSSHTLTIQE 267
           DD+  A + LL     +  + I S    ++ E
Sbjct: 211 DDLVEALMALLRSKGLEEVFNIGSGIGYSLAE 242

This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187570 cd05260, GDP_MD_SDR_e, GDP-mannose 4,6 dehydratase, extended (e) SDRs

 Score = 62.2 bits (152), Expect = 3e-11
 Identities = 65/283 (22%), Positives = 106/283 (37%), Gaps = 47/283 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R  +TG TG   S+L   LL+ GY V   VR        +S +   + +L    +R+ + 
Sbjct: 1   RALITGITGQDGSYLAEFLLEKGYEVHGIVR------RSSSFNTDRIDHLYINKDRITLH 54

Query: 67  HADLSHPDGFDAAIAGC--TGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           + DL+       AI       + H+A      V F+D  PE    +    GTL +L+  +
Sbjct: 55  YGDLTDSSSLRRAIEKVRPDEIYHLAAQSHVKVSFDD--PEYTA-EVNAVGTLNLLE-AI 110

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAA 179
           +   +    Y +S++  +        + E   S+    R      +S YA+SK   +   
Sbjct: 111 RILGLDARFYQASSSEEY------GKVQELPQSETTPFR-----PRSPYAVSKLYADWIT 159

Query: 180 LEFAEEHGLDLVTLIPSMVVGP-----FICPKFAGSV-RSSLALI----LGNREEYGFLL 229
             + E +GL  V        GP     F+  K    V R    L     LGN       L
Sbjct: 160 RNYREAYGLFAVNGRLFNHEGPRRGETFVTRKITRQVARIKAGLQPVLKLGN-------L 212

Query: 230 NTS--MVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAE 270
           +         D   A+  LL+  +     I +  T +++E  E
Sbjct: 213 DAKRDWGDARDYVEAYWLLLQQGEPDDYVIATGETHSVREFVE 255

GDP-mannose 4,6 dehydratase, a homodimeric SDR, catalyzes the NADP(H)-dependent conversion of GDP-(D)-mannose to GDP-4-keto, 6-deoxy-(D)-mannose in the fucose biosynthesis pathway. These proteins have the canonical active site triad and NAD-binding pattern, however the active site Asn is often missing and may be substituted with Asp. A Glu residue has been identified as an important active site base. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316

>gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5

 Score = 60.7 bits (148), Expect = 4e-11
 Identities = 34/127 (26%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V V G TG +   ++  LLD GY V   VR   DP                 +    + 
Sbjct: 1   KVLVVGATGKVGRHVVRELLDRGYQVRALVR---DPSQAEKL----------EAAGAEVV 47

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             DL+  +   AA+ G   V+  A          E V     IN    ++ +  K+G VK
Sbjct: 48  VGDLTDAESLAAALEGIDAVISAAGSGGKGGPRTEAVDYDGNIN----LIDAAKKAG-VK 102

Query: 127 RVVYTSS 133
           R V  SS
Sbjct: 103 RFVLVSS 109

This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203

>gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8

 Score = 61.5 bits (150), Expect = 5e-11
 Identities = 63/272 (23%), Positives = 104/272 (38%), Gaps = 47/272 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TGGTGFI   L  RL   G+ V    R                           I 
Sbjct: 1   KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRP----------------GKAEGLAEVIT 44

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVD---FEDKEPEEVITQRAINGTLGILKSCLKS 122
              LS        + G   V+++A  P+    + +   +E+++ R I  T  +L   + +
Sbjct: 45  WDGLS---LGPWELPGADAVINLAGEPIACRRWTEANKKEILSSR-IEST-RVLVEAIAN 99

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL-DSWGKSYAISKTLTERAALE 181
                 V  S++A  +Y     +++ E   S  D++ ++  +W           E+AA  
Sbjct: 100 APAPPKVLISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAW-----------EKAAQP 148

Query: 182 FAEEHGLDLVTLIPSMVVGPF--ICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
            A E G  +V L   +V+GP     PK     R  L   LG+  ++      S +H+DD+
Sbjct: 149 -ASELGTRVVILRTGVVLGPDGGALPKMLLPFRLGLGGPLGSGRQW-----MSWIHIDDL 202

Query: 240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEF 271
            R   F +E PD  G     +        AEF
Sbjct: 203 VRLIEFAIENPDLSGPVNAVAPNPV--TNAEF 232

This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296

>gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs

 Score = 60.5 bits (147), Expect = 2e-10
 Identities = 58/243 (23%), Positives = 86/243 (35%), Gaps = 43/243 (17%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTG  G +   L  RL      +         P              PG+  ++    
Sbjct: 1   ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRP--------------PGSPPKVEYVR 46

Query: 68  ADLSHPDGFDA-AIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSGT 124
            D+  P   D         V+H+A  +D      E    +  IN  GT  +L +C  +G 
Sbjct: 47  LDIRDPAAADVFREREADAVVHLAFILDPPRDGAE----RHRINVDGTQNVLDACAAAG- 101

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAALEFA 183
           V RVV TSS A    +  +   + E           L    +  Y+  K   E+   EF 
Sbjct: 102 VPRVVVTSSVAVYGAHPDNPAPLTED--------APLRGSPEFAYSRDKAEVEQLLAEFR 153

Query: 184 EEH-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE---EYGFLLNTSMVHVDDV 239
             H  L++  L P+ ++GP          R++    L  R      GF      +H DDV
Sbjct: 154 RRHPELNVTVLRPATILGP--------GTRNTTRDFLSPRRLPVPGGFDPPFQFLHEDDV 205

Query: 240 ARA 242
           ARA
Sbjct: 206 ARA 208

Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306

>gnl|CDD|200431 TIGR04180, EDH_00030, NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family

 Score = 59.2 bits (144), Expect = 4e-10
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 13/130 (10%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGA-SERLRI 65
           V VTG  GFI S L+  L+  GY V   V         NS +   +L   P    +++ +
Sbjct: 1   VLVTGADGFIGSHLVEALVRQGYEVRAFVL-------YNSFNSWGWLDTSPPEVKDKIEV 53

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVAT--PVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
              D+  PD    A+ GC  V H+A    + +    P+  +    + GTL +L++    G
Sbjct: 54  VTGDIRDPDSVRKAMKGCDVVFHLAALIAIPYSYIAPDSYV-DTNVTGTLNVLQAARDLG 112

Query: 124 TVKRVVYTSS 133
            V++VV+TS+
Sbjct: 113 -VEKVVHTST 121

This clade within the NAD dependent epimerase/dehydratase superfamily (pfam01370) is characterized by inclusion of its members within a cassette of seven distinctive enzymes. These include four genes homologous to the elements of the neuraminic (sialic) acid biosynthesis cluster (NeuABCD), an aminotransferase and a nucleotidyltransferase in addition to the epimerase/dehydratase. Together it is very likely that these enzymes direct the biosynthesis of a nine-carbon sugar analagous to CMP-neuraminic acid. These seven genes form the core of the cassette, although they are often accompanied by additional genes that may further modify the product sugar. Although this cassette is widely distributed in bacteria, the family nomenclature arises from the instance in Leptospira interrogans serovar Lai, str. 56601, where it appears as the 30th gene in the 91-gene lipopolysaccharide biosynthesis cluster. Length = 297

>gnl|CDD|187550 cd05239, GDP_FS_SDR_e, GDP-fucose synthetase, extended (e) SDRs

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 68/287 (23%), Positives = 116/287 (40%), Gaps = 65/287 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           ++ VTG  G + S ++  L   GY  V      ELD   + +    F K  P       +
Sbjct: 1   KILVTGHRGLVGSAIVRVLARRGYENVVFRTSKELDLTDQEAVRAFFEKEKPDY-----V 55

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVAT-PVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
            H          AA  G  G++   T P DF        +    +     ++ +  + G 
Sbjct: 56  IHL---------AAKVG--GIVANMTYPADF--------LRDNLLIND-NVIHAAHRFG- 94

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR-KLDSWGKSYAISKTLTERAALEFA 183
           VK++V+  S+    Y D     +DE+     D +    +   + YAI+K    +    + 
Sbjct: 95  VKKLVFLGSSCI--YPDLAPQPIDES-----DLLTGPPEPTNEGYAIAKRAGLKLCEAYR 147

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL--ALI-------LGNREE---YG----- 226
           +++G D ++++P+ + GP     F     S +  ALI       L   +E   +G     
Sbjct: 148 KQYGCDYISVMPTNLYGPH--DNFDPE-NSHVIPALIRKFHEAKLRGGKEVTVWGSGTPR 204

Query: 227 --FLLNTSMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAE 270
             FL      + DD+ARA +FLLE  D      + S   ++I+E+AE
Sbjct: 205 REFL------YSDDLARAIVFLLENYDEPIIVNVGSGVEISIRELAE 245

GDP-fucose synthetase (aka 3, 5-epimerase-4-reductase) acts in the NADP-dependent synthesis of GDP-fucose from GDP-mannose. Two activities have been proposed for the same active site: epimerization and reduction. Proteins in this subgroup are extended SDRs, which have a characteristic active site tetrad and an NADP-binding motif, [AT]GXXGXXG, that is a close match to the archetypical form. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300

>gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 66/314 (21%), Positives = 118/314 (37%), Gaps = 63/314 (20%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTT--VRSELDPEHRNSKDLSFLKNLPGA----- 59
            V +TG TGF+ ++L+  LL           VR++ D E    + +  LK          
Sbjct: 1   TVLLTGATGFLGAYLLRELLKRKNVSKIYCLVRAK-DEEAALERLIDNLKEYGLNLWDEL 59

Query: 60  -SERLRIFHADLSHPD-GFDAAIAG-----CTGVLHVATPVDF----EDKEPEEVITQRA 108
              R+++   DLS P+ G               ++H    V++    E+ +P  V+    
Sbjct: 60  ELSRIKVVVGDLSKPNLGLSDDDYQELAEEVDVIIHNGANVNWVYPYEELKPANVL---- 115

Query: 109 INGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSY 168
             GT  +LK    +G +K + + S+  +VF  ++   + DE      D +   +     Y
Sbjct: 116 --GTKELLKLAA-TGKLKPLHFVST-LSVFSAEEYNALDDE---ESDDMLESQNGLPNGY 168

Query: 169 AISKTLTERAALEFAEEHGLDLVTLIPSMVVGP-FICPKFAGS--------------VRS 213
             SK + E+   E A          +P  ++ P  I   F  S              ++ 
Sbjct: 169 IQSKWVAEKLLREAANRG-------LPVAIIRPGNI---FGDSETGIGNTDDFFWRLLKG 218

Query: 214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR--YICSSHTLTIQEMAEF 271
            L   LG     G  L+  +  VD VARA + L      +    ++ +   +++ ++ + 
Sbjct: 219 CLQ--LGIYPISGAPLD--LSPVDWVARAIVKLALNESNEFSIYHLLNPPLISLNDLLDA 274

Query: 272 LSAKYPEYPIPTVE 285
           L  K   Y I  V 
Sbjct: 275 LEEK--GYSIKEVS 286

This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290

>gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 54.1 bits (131), Expect = 2e-08
 Identities = 64/264 (24%), Positives = 98/264 (37%), Gaps = 68/264 (25%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF---LKNLP--GASE 61
           ++ VTGG GFI S  +  LL+            LD        L++   L+NL    +S 
Sbjct: 2   KILVTGGAGFIGSNFVRYLLNKYPDYKIIN---LD-------KLTYAGNLENLEDVSSSP 51

Query: 62  RLRIFHADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILK 117
           R R    D+   +  D          V+H A  + VD    +PE  I +  + GT  +L+
Sbjct: 52  RYRFVKGDICDAELVDRLFEEEKIDAVIHFAAESHVDRSISDPEPFI-RTNVLGTYTLLE 110

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS---------- 167
           +  K G VKR V+ S+              DE +         L   G+           
Sbjct: 111 AARKYG-VKRFVHIST--------------DEVYGD-------LLDDGEFTETSPLAPTS 148

Query: 168 -YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF-----ICPKFAGSVRSSLALILGN 221
            Y+ SK   +     +   +GL +V    S   GP+     + P F       +   L  
Sbjct: 149 PYSASKAAADLLVRAYHRTYGLPVVITRCSNNYGPYQFPEKLIPLF-------ILNALDG 201

Query: 222 REE--YGFLLNT-SMVHVDDVARA 242
           +    YG  LN    ++V+D ARA
Sbjct: 202 KPLPIYGDGLNVRDWLYVEDHARA 225

This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315

>gnl|CDD|187545 cd05234, UDP_G4E_2_SDR_e, UDP-glucose 4 epimerase, subgroup 2, extended (e) SDRs

 Score = 54.2 bits (131), Expect = 2e-08
 Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 27/146 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT------TTVRSELDPEHRNSKDLSFLKNLPGAS 60
           R+ VTGG GFI S L+ RLL+ G  V       +  R  ++PE  N K   F+K      
Sbjct: 1   RILVTGGAGFIGSHLVDRLLEEGNEVVVVDNLSSGRRENIEPEFEN-KAFRFVK------ 53

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVD--FEDKEPEEVITQRAINGTLGILKS 118
             L    AD       D        V H+A   D      +P+  + +  +  T  +L++
Sbjct: 54  RDLLDT-ADKVAKKDGDT-------VFHLAANPDVRLGATDPDIDLEENVL-ATYNVLEA 104

Query: 119 CLKSGTVKRVVYTSSNAAVFYNDKDV 144
              +G VKR+V+ SS + V Y +  V
Sbjct: 105 MRANG-VKRIVFASS-STV-YGEAKV 127

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of archaeal and bacterial proteins, and has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding

 Score = 52.3 bits (126), Expect = 2e-08
 Identities = 42/241 (17%), Positives = 63/241 (26%), Gaps = 62/241 (25%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           V G TG     L+  LL  G+ VT   R+                     +  +     D
Sbjct: 3   VIGATGKTGRRLVKELLARGHQVTALSRNP----------------SKAPAPGVTPVQKD 46

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
           L        A+AG   V+        +              G   +L +  ++G V+R+V
Sbjct: 47  LFDLADLAEALAGVDAVVDAFGARPDDSD------------GVKHLLDAAARAG-VRRIV 93

Query: 130 YTSSNAA-VFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGL 188
             S+                  F                YA +K     AA E     GL
Sbjct: 94  VVSAAGLYRDEPGTFRLDDAPLF--------------PPYARAK----AAAEELLRASGL 135

Query: 189 DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLE 248
           D   + P                  +  +              S +   DVA A +  LE
Sbjct: 136 DWTIVRPGA---------LFDEEGETYEIGTEGDPAGE-----SSISRADVAAALLDELE 181

Query: 249 Y 249
            
Sbjct: 182 N 182

Length = 182

>gnl|CDD|187558 cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs

 Score = 53.7 bits (130), Expect = 3e-08
 Identities = 68/280 (24%), Positives = 110/280 (39%), Gaps = 75/280 (26%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTGG G+I S  ++ LL+ GY V       LD      ++   L        R+  +
Sbjct: 1   KVLVTGGAGYIGSHTVVELLEAGYDVVV-----LDNLSNGHRE--ALP--RIEKIRIEFY 51

Query: 67  HADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVITQRAINGTLG 114
             D+      D   A      V+H          V  P+ + D           + GTL 
Sbjct: 52  EGDIRDRAALDKVFAEHKIDAVIHFAALKAVGESVQKPLKYYDNN---------VVGTLN 102

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTL 174
           +L++    G VK  V+ SS+AAV Y + +   + E        +   + +G+    +K +
Sbjct: 103 LLEAMRAHG-VKNFVF-SSSAAV-YGEPETVPITEE-----APLNPTNPYGR----TKLM 150

Query: 175 TERAALEFAEEHGLDLVTL--------IPSMVVG----------PFICPKFAGSVRSSLA 216
            E+   + A+  GL+ V L         PS ++G          P++  + A   R  LA
Sbjct: 151 VEQILRDLAKAPGLNYVILRYFNPAGAHPSGLIGEDPQIPNNLIPYVL-QVALGRREKLA 209

Query: 217 LILGNREEYGFLLNT-------SMVHVDDVARAHIFLLEY 249
            I G+  +Y     T         +HV D+A AH+  LE 
Sbjct: 210 -IFGD--DY----PTPDGTCVRDYIHVVDLADAHVLALEK 242

UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 323

>gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 52.8 bits (127), Expect = 5e-08
 Identities = 62/276 (22%), Positives = 100/276 (36%), Gaps = 37/276 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEHRNSKDLSFLKNLPG------ 58
            V +TG TGF+ ++L++ LLD      V   VR++   E   ++     K          
Sbjct: 2   NVLLTGATGFLGAYLLLELLDRSDA-KVICLVRAQ-SDEAALAR---LEKTFDLYRHWDE 56

Query: 59  -ASERLRIFHADLSHPD-GFDAA----IAGCTG-VLHVATPVDFEDKEPEEVITQRAIN- 110
            +++R+ +   DL+ PD G        +A     ++H A  V+     P      R  N 
Sbjct: 57  LSADRVEVVAGDLAEPDLGLSERTWQELAENVDLIIHNAALVNH--VFPYS--ELRGANV 112

Query: 111 -GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYA 169
            GT  +L+    +G  K + Y SS +      +        F                Y 
Sbjct: 113 LGTAEVLRLAA-TGKPKPLHYVSSISV--GETEYYSNFTVDFDEISPTRNVGQGLAGGYG 169

Query: 170 ISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGS---VRSSLALI-LGNREEY 225
            SK + E+   E A + GL +    P  + G              R  L L+ LG   + 
Sbjct: 170 RSKWVAEKLVRE-AGDRGLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDS 228

Query: 226 GFLLNTSMVHVDDVARAHIFLLEYP-DAKGRYICSS 260
            + L+  M+ VD VARA +       +A       S
Sbjct: 229 EYSLD--MLPVDHVARAVVAPSVQVAEAIAALGAHS 262

Length = 382

>gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs

 Score = 51.5 bits (124), Expect = 9e-08
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 21/124 (16%)

Query: 10  VTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA 68
           V G TG     ++  LL   G+ V    R   DP    +K L        A+  + +   
Sbjct: 3   VFGATGKQGGSVVRALLKDPGFKVRALTR---DPSSPAAKAL--------AAPGVEVVQG 51

Query: 69  DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV 128
           DL  P+  +AA+ G  GV  V     +E    +E+   +  N    ++ +  ++G V+  
Sbjct: 52  DLDDPESLEAALKGVYGVFLVTDF--WEAGGEDEI--AQGKN----VVDAAKRAG-VQHF 102

Query: 129 VYTS 132
           V++S
Sbjct: 103 VFSS 106

NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242

>gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 75/331 (22%), Positives = 117/331 (35%), Gaps = 69/331 (20%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTT---VR--SELDPEHR-----NSKDLSFLKNL 56
            V +TG TGF+   L+ +LL     +      +R  S    E R       K     +NL
Sbjct: 2   SVLITGATGFLGKVLLEKLLRSCPDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNL 61

Query: 57  -PGASERLRIFHADLSHPD-GFDAAIAGC-----TGVLHVATPVDFEDKEPEEVITQRAI 109
            P    ++     DLS P+ G               ++H A  V F+++  E +    +I
Sbjct: 62  NPLFESKIVPIEGDLSEPNLGLSDEDLQTLIEEVNIIIHCAATVTFDERLDEAL----SI 117

Query: 110 N--GTLGILKSCLKSGTVKRVVYTS---SNAAVFYNDKDVDMMDETFWSDVDYIRKLD-- 162
           N  GTL +L+   +   +K  V+ S    N      ++ V          +D +  +D  
Sbjct: 118 NVLGTLRLLELAKRCKKLKAFVHVSTAYVNGDRQLIEEKVYPPPADPEKLIDILELMDDL 177

Query: 163 -----------SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG----PFICPKF 207
                          +Y  +K L ER  L+      L LV + PS+V      PF  P +
Sbjct: 178 ELERATPKLLGGHPNTYTFTKALAERLVLKERG--NLPLVIVRPSIVGATLKEPF--PGW 233

Query: 208 AGSVRSSLALILGNREEYGFLLNTSM----------VHVDDVARAHIFLLEYP-DAKGR- 255
             +      L L     YG  +  +M          + VD VA A +    Y    K R 
Sbjct: 234 IDNFNGPDGLFLA----YGKGILRTMNADPNAVADIIPVDVVANALLAAAAYSGVRKPRE 289

Query: 256 ---YICSS---HTLTIQEMAEFLSAKYPEYP 280
              Y C S   +  T  E  E ++    + P
Sbjct: 290 LEVYHCGSSDVNPFTWGEAEELINQYLKKNP 320

SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320

>gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 62/272 (22%), Positives = 94/272 (34%), Gaps = 45/272 (16%)

Query: 8   VCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEH-----RNSKDLSFLKNLPGAS 60
           V +TG TGF+ ++L+  LL       V   VR+    EH     R +     L +   A 
Sbjct: 2   VLLTGATGFLGAYLLEELLRRSTQAKVICLVRAA-SEEHAMERLREALRSYRLWHEDLAR 60

Query: 61  ERLRIFHADLSHPD-GFDAA-----IAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GT 112
           ER+ +   DLS P  G   A           ++H    V++      E+   R  N  GT
Sbjct: 61  ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVNWV-YPYSEL---RGANVLGT 116

Query: 113 LGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK 172
             +L+    SG  K + Y S+ +     D      D+        +         YA SK
Sbjct: 117 REVLRLAA-SGRAKPLHYVSTISVGAAIDLSTVTEDDAT------VTPPPGLAGGYAQSK 169

Query: 173 TLTERAALEFAEEHGLDLVTLIPSMVVGP----------FICPKFAGSVRSSLALILGNR 222
            + E    E A + GL +  + P  ++G            +     G +           
Sbjct: 170 WVAELLVRE-ASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPQSPEL 228

Query: 223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG 254
            E        +  VD VARA + L   P A  
Sbjct: 229 TE-------DLTPVDFVARAIVVLSSRPAASA 253

This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367

>gnl|CDD|187541 cd05230, UGD_SDR_e, UDP-glucuronate decarboxylase (UGD) and related proteins, extended (e) SDRs

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 68/278 (24%), Positives = 110/278 (39%), Gaps = 44/278 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFLKNLPGASERLRI 65
           R+ +TGG GF+ S L  RLL+ G+ V       +D      K  +  L   P        
Sbjct: 2   RILITGGAGFLGSHLCDRLLEDGHEVIC-----VDNFFTGRKRNIEHLIGHP----NFEF 52

Query: 66  FHADLSHP--DGFDAAIAGCTGVLHVA---TPVDFEDKEPEEVITQRAINGTLGILKSCL 120
              D++ P     D        + H+A   +PV ++   P + +    + GTL +L    
Sbjct: 53  IRHDVTEPLYLEVDQ-------IYHLACPASPVHYQ-YNPIKTLKTNVL-GTLNMLGLAK 103

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERA 178
           + G   RV+  S++    Y D +V    E++W +V+ I  R        Y   K + E  
Sbjct: 104 RVGA--RVLLASTSEV--YGDPEVHPQPESYWGNVNPIGPR------SCYDEGKRVAETL 153

Query: 179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE----YGFLLNT-SM 233
            + +  +HG+D+         GP + P     V + +   L  R E    YG    T S 
Sbjct: 154 CMAYHRQHGVDVRIARIFNTYGPRMHPNDGRVVSNFIVQAL--RGEPITVYGDGTQTRSF 211

Query: 234 VHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAE 270
            +V D+    I L+      G   + +    TI E+AE
Sbjct: 212 QYVSDLVEGLIRLMNSDYFGGPVNLGNPEEFTILELAE 249

UGD catalyzes the formation of UDP-xylose from UDP-glucuronate; it is an extended-SDR, and has the characteristic glycine-rich NAD-binding pattern, TGXXGXXG, and active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 51.1 bits (123), Expect = 2e-07
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 13/133 (9%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT---TTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           RV +TGG GFI S L    L  G+ V      +R        N   L   +   G    +
Sbjct: 2   RVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSF---GNLAWLKANREDGG----V 54

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
           R  H D+ + +  +        ++H A    V      P       A  GTL +L++  +
Sbjct: 55  RFVHGDIRNRNDLEDLFEDIDLIIHTAAQPSVTTSASSPRLDFETNA-LGTLNVLEAARQ 113

Query: 122 SGTVKRVVYTSSN 134
                  ++TS+N
Sbjct: 114 HAPNAPFIFTSTN 126

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4

 Score = 49.6 bits (119), Expect = 5e-07
 Identities = 59/266 (22%), Positives = 90/266 (33%), Gaps = 57/266 (21%)

Query: 13  GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH 72
           G G++   L  +LL  G+ VT T RS                  P          ADL+ 
Sbjct: 5   GCGYLGQRLARQLLAQGWQVTGTTRSP-----EKLAADRPAGVTP--------LAADLTQ 51

Query: 73  PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS 132
           P      +A    ++ ++ P              RA+   L       +   V+RV+Y S
Sbjct: 52  PG----LLADVDHLV-ISLPPPAGSYRGGYDPGLRALLDALA------QLPAVQRVIYLS 100

Query: 133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDL-- 190
           S   V Y D+  + +DET                S     T + RA LE AE+  L L  
Sbjct: 101 S-TGV-YGDQQGEWVDET----------------SPPNPSTESGRALLE-AEQALLALGS 141

Query: 191 --VTLI-PSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLL 247
              T++  + + GP   P       +                 T+ +HVDD+  A  F L
Sbjct: 142 KPTTILRLAGIYGPGRHP---LRRLAQGTGRPPAGNAP-----TNRIHVDDLVGALAFAL 193

Query: 248 EYPDAKGRY-ICSSHTLTIQEMAEFL 272
           + P     Y +     +T  E  +  
Sbjct: 194 QRPAPGPVYNVVDDLPVTRGEFYQAA 219

Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251

>gnl|CDD|187581 cd05273, GME-like_SDR_e, Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME)-like, extended (e) SDRs

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 32/191 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R  VTG  GFI S L  RL   G+ V         PEH               ++     
Sbjct: 2   RALVTGAGGFIGSHLAERLKAEGHYV--RGADWKSPEHMTQ-----------PTDDDEFH 48

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPV---DFEDKEPEEVI-TQRAINGTLGILKSCLKS 122
             DL   +    A  G   V H+A  +    +       ++     IN    +L++   +
Sbjct: 49  LVDLREMENCLKATEGVDHVFHLAADMGGMGYIQSNHAVIMYNNTLIN--FNMLEAARIN 106

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW----GKSYAISKTLTERA 178
           G V+R ++ SS A V+   K ++       + V  +R+ D+W      +Y   K  TER 
Sbjct: 107 G-VERFLFASS-ACVYPEFKQLE-------TTVVRLREEDAWPAEPQDAYGWEKLATERL 157

Query: 179 ALEFAEEHGLD 189
              + E++G++
Sbjct: 158 CQHYNEDYGIE 168

This subgroup of NDP-sugar epimerase/dehydratases are extended SDRs; they have the characteristic active site tetrad, and an NAD-binding motif: TGXXGXX[AG], which is a close match to the canonical NAD-binding motif. Members include Arabidopsis thaliana GDP-mannose-3',5'-epimerase (GME) which catalyzes the epimerization of two positions of GDP-alpha-D-mannose to form GDP-beta-L-galactose. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 328

>gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 26/130 (20%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG TG++   L+ RLL  G+ V   VRS      +       L + P  SER+ +  
Sbjct: 1   VLVTGATGYVGGRLVPRLLQEGHQVRALVRS----PEK-------LADRP-WSERVTVVR 48

Query: 68  ADLSHPDGFDAAIAGCTGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            DL  P+   AA+ G     ++     +  DFE+ +      + A N      ++   +G
Sbjct: 49  GDLEDPESLRAALEGIDTAYYLVHSMGSGGDFEEAD-----RRAARN----FARAARAAG 99

Query: 124 TVKRVVYTSS 133
            VKR++Y   
Sbjct: 100 -VKRIIYLGG 108

This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293

>gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs

 Score = 48.1 bits (115), Expect = 1e-06
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 33/201 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V +TG +GF+   L  RLL           S++  E     D+   K  P  + R+   
Sbjct: 2   KVLITGASGFVGQRLAERLL-----------SDVPNERLILIDVVSPKA-PSGAPRVTQI 49

Query: 67  HADLSHPDGFDAAIAG-CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             DL+ P   +A   G    V H+A  V    +   ++  +  ++GT  +L++  K+G  
Sbjct: 50  AGDLAVPALIEALANGRPDVVFHLAAIVSGGAEADFDLGYRVNVDGTRNLLEALRKNGPK 109

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDET----FWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
            R V+TSS  AV+       + D T                    SY   K + E    +
Sbjct: 110 PRFVFTSS-LAVYGLPLPNPVTDHTALDPAS--------------SYGAQKAMCELLLND 154

Query: 182 FAEEHGLDLVTLI-PSMVVGP 201
           ++    +D  TL  P++ V P
Sbjct: 155 YSRRGFVDGRTLRLPTVCVRP 175

Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305

>gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein

 Score = 48.0 bits (115), Expect = 2e-06
 Identities = 62/266 (23%), Positives = 96/266 (36%), Gaps = 68/266 (25%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + +TGGTGFI   L  RL   G+ VT   RS   P   N+K         G         
Sbjct: 1   ILITGGTGFIGRALTQRLTKRGHEVTILTRSP--PPGANTKW-------EGYKPWAGEDA 51

Query: 68  ADLSHPDGFDAAI--AGCTGVLH-VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
             L   +G DA I  AG   +     T       E ++ I    I+ T  +L   + +  
Sbjct: 52  DSL---EGADAVINLAG-EPIADKRWTE------ERKQEIRDSRIDTT-RLLVEAIAAAE 100

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDET-------FWSDVDYIRKLDSWGKSYAISKTLTER 177
            K  V+ S++A  +Y   +     E        F +++        W           E 
Sbjct: 101 QKPKVFISASAVGYYGPSEDREYTEEDSPAGDDFLAELCR-----DW-----------EE 144

Query: 178 AALEFAEEHGLDLVTLIPSMVVGP-------FICP--KFAGSVRSSLALILGNREEYGFL 228
           AA   AE+ G  +V L   +V+GP        + P     G         LG+  ++   
Sbjct: 145 AAQA-AEDLGTRVVLLRTGIVLGPKGGALAKMLLPFRLGLGGP-------LGSGRQW--- 193

Query: 229 LNTSMVHVDDVARAHIFLLEYPDAKG 254
              S +H++D+ +  +F LE     G
Sbjct: 194 --FSWIHIEDLVQLILFALENASVSG 217

This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291

>gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs

 Score = 47.7 bits (114), Expect = 2e-06
 Identities = 53/269 (19%), Positives = 92/269 (34%), Gaps = 66/269 (24%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTG TG + + ++  LL    SV   VR+        +K  +      G      +   D
Sbjct: 3   VTGATGKLGTAVVELLLAKVASVVALVRNP-----EKAKAFAA----DGV----EVRQGD 49

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
              P+  + A  G   +L + +P D ED+  +    +  I+       +  ++G VK +V
Sbjct: 50  YDDPETLERAFEGVDRLLLI-SPSDLEDRIQQH---KNFID-------AAKQAG-VKHIV 97

Query: 130 YTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLD 189
           Y S          +    D  F              + +      TE+      E  G+ 
Sbjct: 98  YLS-----ASGADE----DSPF-----------LLARDHGA----TEKY----LEASGIP 129

Query: 190 LVTLIPSMVVGPFICPKFAGSVRSS--LALILGNREEYGFLLNTSMVHVDDVARAHIFLL 247
              L P   +      +F  S+     +    G+ +        + V   D+A A    L
Sbjct: 130 YTILRPGWFMDNL--LEFLPSILEEGTIYGPAGDGK-------VAFVDRRDIAEAAAAAL 180

Query: 248 EYPDAKGR-Y-ICSSHTLTIQEMAEFLSA 274
             P  +G+ Y +     L+  E+A  LS 
Sbjct: 181 TEPGHEGKVYNLTGPEALSYAELAAILSE 209

TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272

>gnl|CDD|224012 COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

 Score = 47.9 bits (115), Expect = 2e-06
 Identities = 68/290 (23%), Positives = 106/290 (36%), Gaps = 74/290 (25%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +V VTGG G+I S  + +LL  G+ V       LD      K    L  L       + +
Sbjct: 2   KVLVTGGAGYIGSHTVRQLLKTGHEVVV-----LDNLSNGHKI--ALLKLQF-----KFY 49

Query: 67  HADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVITQRAINGTLG 114
             DL       A         V+H          V  P+ + D           + GTL 
Sbjct: 50  EGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDNN---------VVGTLN 100

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTL 174
           ++++ L++G VK+ ++ SS AAV Y +     + ET                 Y  SK +
Sbjct: 101 LIEAMLQTG-VKKFIF-SSTAAV-YGEPTTSPISETSPLAPI---------NPYGRSKLM 148

Query: 175 TERAALEFAEEHGLDLVTL--------IPSMVVG----------PFICPKFAGSVRSSLA 216
           +E    + A+ +   +V L         P   +G          P       G  R  L 
Sbjct: 149 SEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGK-RDKLF 207

Query: 217 LILGNREEYGFLLNTSM---VHVDDVARAHIFLLEYPDAKGRYICSSHTL 263
            I G+  +Y     T +   +HVDD+A AH+  L+Y    G    S++  
Sbjct: 208 -IFGD--DYDTKDGTCIRDYIHVDDLADAHVLALKYLKEGG----SNNIF 250

Length = 329

>gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs

 Score = 46.6 bits (111), Expect = 2e-06
 Identities = 37/126 (29%), Positives = 54/126 (42%), Gaps = 19/126 (15%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + + G TGFI   L   LL+ G+ VT  V        RN+K LS     P A        
Sbjct: 1   ILILGATGFIGRALARELLEQGHEVTLLV--------RNTKRLSKEDQEPVAVV-----E 47

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            DL   D    A+ G   V+H+A     + ++  EV     + GT  +L++  K   VK 
Sbjct: 48  GDLRDLDSLSDAVQGVDVVIHLAGA-PRDTRDFCEVD----VEGTRNVLEAA-KEAGVKH 101

Query: 128 VVYTSS 133
            ++ SS
Sbjct: 102 FIFISS 107

Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176

>gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

 Score = 47.2 bits (112), Expect = 3e-06
 Identities = 56/273 (20%), Positives = 82/273 (30%), Gaps = 61/273 (22%)

Query: 6   GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            ++ VTG TGF+   ++  LL  G+ V   VR+                   G    L  
Sbjct: 1   MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA----------GGVEVVL-- 48

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
              DL  P    A   G  GVL ++  +D  D           +   +   ++      V
Sbjct: 49  --GDLRDPKSLVAGAKGVDGVLLISGLLDGSDAFR-----AVQVTAVVRAAEAAGAG--V 99

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA-E 184
           K  V  S              +     S     R                 +AA+E A  
Sbjct: 100 KHGVSLSV-------------LGADAASPSALAR----------------AKAAVEAALR 130

Query: 185 EHGLDLVTL-IPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAH 243
             G+   TL   +  +G       A        +  G           S + VDDVA A 
Sbjct: 131 SSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGI-------GRLSPIAVDDVAEAL 183

Query: 244 IFLLEYPDAKGR--YICSSHTLTIQEMAEFLSA 274
              L+ P   GR   +     LT+ E+A  L  
Sbjct: 184 AAALDAPATAGRTYELAGPEALTLAELASGLDY 216

Length = 275

>gnl|CDD|187672 cd09812, 3b-HSD_like_1_SDR_e, 3beta-hydroxysteroid dehydrogenase (3b-HSD)-like, subgroup1, extended (e) SDRs

 Score = 45.6 bits (108), Expect = 1e-05
 Identities = 70/300 (23%), Positives = 117/300 (39%), Gaps = 52/300 (17%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V +TGG G+    L   L   G  V          E            LP   E ++   
Sbjct: 2   VLITGGGGYFGFRLGCALAKSGVHVILFDIRRPQQE------------LP---EGIKFIQ 46

Query: 68  ADLSHPDGFDAAIAGCTGVLHVAT-PVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
           AD+      + A+AG   V H+A+  +   ++   E+I +  + GT  I++ C++   V 
Sbjct: 47  ADVRDLSQLEKAVAGVDCVFHIASYGMSGREQLNRELIEEINVRGTENIIQVCVRR-RVP 105

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           R++YTS+   +F   + +   DE+    + Y+  LD     Y+ +K++ E+  L+ A   
Sbjct: 106 RLIYTSTFNVIF-GGQPIRNGDES----LPYL-PLDLHVDHYSRTKSIAEQLVLK-ANNM 158

Query: 187 GLD-----LVT--LIPSMVVGP---FICPKFAGSVRSSLALILGNREEYG-FLLNTSMVH 235
            L      L T  L P+ + GP      P+    +   L + +     YG        VH
Sbjct: 159 PLPNNGGVLRTCALRPAGIYGPGEQRHLPRIVSYIEKGLFMFV-----YGDPKSLVEFVH 213

Query: 236 VDDVARAHIFLLEYPDAKGRYICSSHTLTIQE------------MAEFLSAKYPEYPIPT 283
           VD++ +AHI   E       YI S     I +            + E L   +P   +P 
Sbjct: 214 VDNLVQAHILAAEALTTAKGYIASGQAYFISDGRPVNNFEFFRPLVEGLGYSFPSLRLPL 273

An uncharacterized subgroup of the 3b-HSD-like extended-SDR family. Proteins in this subgroup have the characteristic active site tetrad and NAD(P)-binding motif of extended-SDRs. 3 beta-HSD catalyzes the oxidative conversion of delta 5-3 beta-hydroxysteroids to the delta 4-3-keto configuration; this activity is essential for the biosynthesis of all classes of hormonal steroids. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 339

>gnl|CDD|177883 PLN02240, PLN02240, UDP-glucose 4-epimerase

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 1  MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF--LKNLPG 58
          M      + VTGG G+I S  +++LL  GY V   V   LD    NS + +   +K L G
Sbjct: 1  MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKV--VVIDNLD----NSSEEALRRVKELAG 54

Query: 59 A-SERLRIFHADLSHPDGFDAAIAGCT--GVLHVA 90
             + L     DL   +  +   A      V+H A
Sbjct: 55 DLGDNLVFHKVDLRDKEALEKVFASTRFDAVIHFA 89

Length = 352

>gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

 Score = 43.8 bits (104), Expect = 4e-05
 Identities = 67/287 (23%), Positives = 111/287 (38%), Gaps = 51/287 (17%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + +TGGTG I   L  RL   G+ VT   R    P   +      +    G ++ L    
Sbjct: 1   ILITGGTGLIGRALTARLRKGGHQVTILTRR---PPKASQNLHPNVTLWEGLADAL---- 53

Query: 68  ADLSHPDGFDAAI--AGCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKS 122
                  G DA I  AG         P+  E    ++ +E I Q  IN T   L   + +
Sbjct: 54  -----TLGIDAVINLAG--------EPI-AERRWTEKQKEEIRQSRINTT-EKLVELIAA 98

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL-DSWGKSYAISKTLTERAALE 181
              K  V  S++A  +Y      ++ E      D++ +L   W           E  AL+
Sbjct: 99  SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDW-----------EEEALQ 147

Query: 182 FAEEHGLDLVTLIPSMVVGPF--ICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
            A++ G  +V L   +V+ P      K     +  L   LG+  ++      S +H++D+
Sbjct: 148 -AQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQW-----FSWIHIEDL 201

Query: 240 ARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSA---KYPEYPIP 282
             A +FLLE     G +  ++ + +  +E A  L     +    P+P
Sbjct: 202 VNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVP 248

Length = 297

>gnl|CDD|187562 cd05252, CDP_GD_SDR_e, CDP-D-glucose 4,6-dehydratase, extended (e) SDRs

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 26/150 (17%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLD-----HGYSVTTTVRSELDPEHRNSKDLSFLKNLP 57
           +GK RV VTG TGF  SWL + L +      GYS+         P      +L       
Sbjct: 3   QGK-RVLVTGHTGFKGSWLSLWLQELGAKVIGYSLDPPTN----PNLFELANLD------ 51

Query: 58  GASERLRIFHADLSHPDGFDAAIAGCTG--VLHVA--TPVDFEDKEPEEVITQRAINGTL 113
               ++     D+   +    AI       V H+A    V    K+P E   +  + GT+
Sbjct: 52  ---NKISSTRGDIRDLNALREAIREYEPEIVFHLAAQPLVRLSYKDPVETF-ETNVMGTV 107

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKD 143
            +L++  ++G+VK VV  +S+    Y +K+
Sbjct: 108 NLLEAIRETGSVKAVVNVTSDKC--YENKE 135

This subgroup contains CDP-D-glucose 4,6-dehydratase, an extended SDR, which catalyzes the conversion of CDP-D-glucose to CDP-4-keto-6-deoxy-D-glucose. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 336

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 18/146 (12%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V +TGG+  I   L   L+  G +V    RSE   E    +++    N  G   ++    
Sbjct: 4   VLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEA-VEEIEAEANASGQ--KVSYIS 60

Query: 68  ADLSHPDGFDAAIAGCTG-------VLHVA---TPVDFEDKEPEEVITQRAIN--GTLGI 115
           ADLS  +  + A A           V++ A    P  FED   EE      +N  G+L +
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGLFEDLTAEEFERGMDVNYFGSLNV 120

Query: 116 LKSCL---KSGTVKRVVYTSSNAAVF 138
             + L   K      +V+ SS AA+ 
Sbjct: 121 AHAVLPLMKEQRPGHIVFVSSQAALV 146

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|178047 PLN02427, PLN02427, UDP-apiose/xylose synthase

 Score = 41.4 bits (97), Expect = 3e-04
 Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 71/328 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA---SERL 63
            +C+ G  GFI S L  +L+      T T    L  +  N K    L+  P     S R+
Sbjct: 16  TICMIGAGGFIGSHLCEKLM------TETPHKVLALDVYNDKIKHLLE--PDTVPWSGRI 67

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVA---TPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           +    ++ H    +  I      +++A   TP D+  + P + I    I+  L ++K C 
Sbjct: 68  QFHRINIKHDSRLEGLIKMADLTINLAAICTPADYNTR-PLDTIYSNFIDA-LPVVKYCS 125

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD-YIRKLDS------------WGKS 167
           ++   KR+++ S+              D     D   Y+ K D             W  S
Sbjct: 126 ENN--KRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRW--S 181

Query: 168 YAISKTLTERAALEFAE--EHGLDLVTLIPSMVVGP---FI---------CPK----FAG 209
           YA +K L ER  L +AE  E+GL+   + P   +GP   FI          P+    F+ 
Sbjct: 182 YACAKQLIER--LIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN 239

Query: 210 SV--RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS----SHTL 263
           ++  R  L L+ G + +  F      V++ D   A + ++E P     +I +    ++ +
Sbjct: 240 NLLRREPLKLVDGGQSQRTF------VYIKDAIEAVLLMIENPARANGHIFNVGNPNNEV 293

Query: 264 TIQEMAEFLSAKY------PEYPIPTVE 285
           T++++AE ++  Y      P    PTV+
Sbjct: 294 TVRQLAEMMTEVYAKVSGEPALEEPTVD 321

Length = 386

>gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs

 Score = 40.0 bits (94), Expect = 7e-04
 Identities = 70/288 (24%), Positives = 91/288 (31%), Gaps = 69/288 (23%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           VTG TG I S +   LL+ G  V   VRS         +  + L    GA     +   D
Sbjct: 3   VTGATGRIGSKVATTLLEAGRPVRALVRS--------DERAAALAAR-GA----EVVVGD 49

Query: 70  LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV 129
           L  P    AA+AG   V  +A P    D  P  V    A         S L+   VKRVV
Sbjct: 50  LDDPAVLAAALAGVDAVFFLAPPAPTADARPGYVQAAEAF-------ASALREAGVKRVV 102

Query: 130 YTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLD 189
             SS  A        D    +             W         L E+         GL 
Sbjct: 103 NLSSVGA--------DPESPS-------GLIRGHW---------LMEQV----LNWAGLP 134

Query: 190 LVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFL---LNTSMVHVDDVARAHIFL 246
           +V L P+          F  ++ S    I                  +  DD+AR    L
Sbjct: 135 VVHLRPAW---------FMENLLSQAPSIRKAGVLALPFPGDGRLPPIATDDIARVAAKL 185

Query: 247 LEYPDAKG---RYICSSHTLTIQEMAEFLSA------KYPEYPIPTVE 285
           L  P+  G     +     LT+ E+A  LS       +Y   P    E
Sbjct: 186 LLDPEWHGHRVYELTGPEDLTMNEIAAALSRVLGRPVRYVPVPEEQWE 233

Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259

>gnl|CDD|187660 cd08957, WbmH_like_SDR_e, Bordetella bronchiseptica enzymes WbmH and WbmG-like, extended (e) SDRs

 Score = 40.2 bits (94), Expect = 7e-04
 Identities = 59/202 (29%), Positives = 86/202 (42%), Gaps = 39/202 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPEHRNSKDLSFLKNLPGASE 61
           +V +TGG G I S LI  LL+ G+ V       T R E  P+H N   L+ ++       
Sbjct: 2   KVLITGGAGQIGSHLIEHLLERGHQVVVIDNFATGRREHLPDHPN---LTVVEGSIADKA 58

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSC 119
            +     D   PD           V+H A       K+P++       N  G   ++++ 
Sbjct: 59  LVDKLFGDFK-PDA----------VVHTAAAY----KDPDDWYEDTLTNVVGGANVVQAA 103

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
            K+G VKR++Y  +  A+ Y  K   M        +D+ R     G SYAISKT  E   
Sbjct: 104 KKAG-VKRLIYFQT--ALCYGLKP--MQQPIR---LDHPR--APPGSSYAISKTAGE--- 150

Query: 180 LEFAEEHGLDLVTLIPSMVVGP 201
             + E  G+D VT   + V GP
Sbjct: 151 -YYLELSGVDFVTFRLANVTGP 171

Bordetella bronchiseptica enzymes WbmH and WbmG, and related proteins. This subgroup exhibits the active site tetrad and NAD-binding motif of the extended SDR family. It has been proposed that the active site in Bordetella WbmG and WbmH cannot function as an epimerase, and that it plays a role in O-antigen synthesis pathway from UDP-2,3-diacetamido-2,3-dideoxy-l-galacturonic acid. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 307

>gnl|CDD|182639 PRK10675, PRK10675, UDP-galactose-4-epimerase; Provisional

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 28/156 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT------TTVRSELDPEHRNSKDLSFLKNLPGAS 60
           RV VTGG+G+I S   ++LL +G+ V        + RS L    R              +
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRN 61

Query: 61  ERL--RIFHADLSHPDGFDAAI--AGCTGV-LHVATPVDFEDKEPEEVITQRAINGTLGI 115
           E L   I H    H    D  I  AG   V   V  P+++ D           +NGTL  
Sbjct: 62  EALLTEILHD---HA--IDTVIHFAGLKAVGESVQKPLEYYDNN---------VNGTL-R 106

Query: 116 LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF 151
           L S +++  VK ++++SS  A  Y D+      E+F
Sbjct: 107 LISAMRAANVKNLIFSSS--ATVYGDQPKIPYVESF 140

Length = 338

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 38.3 bits (90), Expect = 0.001
 Identities = 33/149 (22%), Positives = 49/149 (32%), Gaps = 24/149 (16%)

Query: 6   GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           G   VTGG G +   L   L + G  + V  +     DPE       + L  L      +
Sbjct: 1   GTYLVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAE-----ALLAELEARGAEV 55

Query: 64  RIFHADLSHPDGFDAAIAGC-------TGVLHVATPVD---FEDKEPEEVITQRA----I 109
            +   D+S  D   A +A          GV+H A  +      +   E+    R     +
Sbjct: 56  TVVACDVSDRDAVRALLAEIRADGPPLRGVIHAAGVLRDALLANMTAEDF--ARVLAPKV 113

Query: 110 NGTLGILKSCLKSGTVKRVVYTSSNAAVF 138
            G    L    +   +   V  SS A V 
Sbjct: 114 TGAW-NLHEATRDRPLDFFVLFSSIAGVL 141

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs

 Score = 39.1 bits (92), Expect = 0.002
 Identities = 61/278 (21%), Positives = 105/278 (37%), Gaps = 54/278 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TG TG +   L+  L + GY V  T RS                       R  +F
Sbjct: 1   KILITGATGMLGRALVRLLKERGYEVIGTGRS-----------------------RASLF 37

Query: 67  HADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAIN--GTLGILKSCL 120
             DL+ PD  + AI       +++ A  T VD  + +PE       +N      + ++  
Sbjct: 38  KLDLTDPDAVEEAIRDYKPDVIINCAAYTRVDKCESDPELAY---RVNVLAPENLARAAK 94

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           + G   R+++ S++  VF   K         + + D    L+ +GK    SK L E A L
Sbjct: 95  EVGA--RLIHISTD-YVFDGKK-------GPYKEEDAPNPLNVYGK----SKLLGEVAVL 140

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFL-LNTSMVHVDDV 239
                +    + L  S + G     +    V   L L    +E         S  +  D+
Sbjct: 141 NANPRY----LILRTSWLYGELKNGE--NFVEWMLRLAAERKEVNVVHDQIGSPTYAADL 194

Query: 240 ARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKY 276
           A A + L+E     G Y + +S  ++  E A+ ++   
Sbjct: 195 ADAILELIERNSLTGIYHLSNSGPISKYEFAKLIADAL 232

dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 49/220 (22%), Positives = 74/220 (33%), Gaps = 55/220 (25%)

Query: 45  RNSKDLSFLKNLPGASERLRIFHADLSHP--------------DGFDAAIAGCTGVLHVA 90
           R+    + L  L  +  RL I   D++                 G D  I    G+LH  
Sbjct: 31  RDPSAATELAALGASHSRLHILELDVTDEIAESAEAVAERLGDAGLDVLIN-NAGILHSY 89

Query: 91  TPVDFEDKEPEEVITQRAIN--GTLGILKSC---LKSGTVKRVVYTSSNAAVFYNDKDVD 145
            P    D   E+++    +N  G L + ++    L  G   +++  SS          + 
Sbjct: 90  GPASEVD--SEDLLEVFQVNVLGPLLLTQAFLPLLLKGARAKIINISSRVG------SIG 141

Query: 146 MMDETFWSDVDYIRKLDSWGKSYAISKT----LTERAALEFAEEHGLDLVTLIPSMV--- 198
                             W  SY  SK     LT+  A+E  +  G+ +V+L P  V   
Sbjct: 142 DNT------------SGGWY-SYRASKAALNMLTKSLAVEL-KRDGITVVSLHPGWVRTD 187

Query: 199 -VGPFICPKF----AGSVRSSLALILGNREEY-GFLLNTS 232
             GPF   K       SV   L +I    EE  G  L+  
Sbjct: 188 MGGPFAKNKGPITPEESVAGLLKVIDNLNEEDSGKFLDYD 227

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 54/263 (20%), Positives = 84/263 (31%), Gaps = 65/263 (24%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
             VTG +  I   +  RL   G  V            RN + L+ L  +           
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLA--------DRNEEALAELAAIEALGGNAVAVQ 52

Query: 68  ADLSHPDGFDAAIAGCT---GVLHV-------ATPVDFEDKEPEEVITQRAIN--GTLGI 115
           AD+S  +  +A +       G L +       A P   E+   E+      +N  G   +
Sbjct: 53  ADVSDEEDVEALVEEALEEFGRLDILVNNAGIARPGPLEELTDEDWDRVLDVNLTGVFLL 112

Query: 116 LKSCLK------SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYA 169
            ++ L        G   R+V  SS A +                     R L     +YA
Sbjct: 113 TRAALPHMKKQGGG---RIVNISSVAGL---------------------RPLPGQA-AYA 147

Query: 170 ISK----TLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY 225
            SK     LT   ALE A  +G+ +  + P +V  P +           LA  +      
Sbjct: 148 ASKAALEGLTRSLALELA-PYGIRVNAVAPGLVDTPMLAKLGPEEAEKELAAAIPLGR-- 204

Query: 226 GFLLNTSMVHVDDVARAHIFLLE 248
                  +   ++VA A +FL  
Sbjct: 205 -------LGTPEEVAEAVVFLAS 220

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs

 Score = 37.5 bits (87), Expect = 0.003
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 22/129 (17%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTG TG     +I  LL       + VR+ +    RN +  + L    G      +  
Sbjct: 1   IAVTGATGQQGGSVIRHLLA---KGASQVRAVV----RNVEKAATLA-DQGVE----VRQ 48

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D + P+    A AG + +  +  P    D   E    +        +  +  ++G  K 
Sbjct: 49  GDYNQPELLQKAFAGASKLFIITGPH--YDNTLEIKQGK-------NVADAARRAGV-KH 98

Query: 128 VVYTSSNAA 136
           +  T    A
Sbjct: 99  IYSTGYAFA 107

Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224

>gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs

 Score = 37.6 bits (88), Expect = 0.003
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 24/142 (16%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           + G TG   S ++   L  G+ VT  VR   DP    ++            E+L++   D
Sbjct: 4   IIGATGRTGSAIVREALARGHEVTALVR---DPAKLPAEH-----------EKLKVVQGD 49

Query: 70  LSHPDGFDAAIAGCTGVLH-VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV 128
           +   +    A+ G   V+  + T  D                GT  I+ S +K+  VKR+
Sbjct: 50  VLDLEDVKEALEGQDAVISALGTRNDLSP--TTLHSE-----GTRNIV-SAMKAAGVKRL 101

Query: 129 VYTSSNAAVFYNDKDVDMMDET 150
           +     A    +   V ++ +T
Sbjct: 102 IVVGG-AGSLDDRPKVTLVLDT 122

Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	285
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	100.0
PLN02650	351	dihydroflavonol-4-reductase	100.0
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	100.0
PLN02214	342	cinnamoyl-CoA reductase	100.0
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	100.0
PLN00198	338	anthocyanidin reductase; Provisional	100.0
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	100.0
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	100.0
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	100.0
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	100.0
PLN02896	353	cinnamyl-alcohol dehydrogenase	100.0
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	100.0
PLN02427	386	UDP-apiose/xylose synthase	100.0
PLN02583	297	cinnamoyl-CoA reductase	100.0
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	100.0
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	100.0
PLN02572	442	UDP-sulfoquinovose synthase	100.0
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	100.0
PLN02695	370	GDP-D-mannose-3',5'-epimerase	100.0
PLN02206	442	UDP-glucuronate decarboxylase	100.0
PLN02166	436	dTDP-glucose 4,6-dehydratase	100.0
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	100.0
PLN02686	367	cinnamoyl-CoA reductase	100.0
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	100.0
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	100.0
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	100.0
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	100.0
PLN02260	668	probable rhamnose biosynthetic enzyme	100.0
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	100.0
PLN02240	352	UDP-glucose 4-epimerase	100.0
PLN02653	340	GDP-mannose 4,6-dehydratase	100.0
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	100.0
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	100.0
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	100.0
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	100.0
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	100.0
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	100.0
PLN02996	491	fatty acyl-CoA reductase	100.0
PRK10675	338	UDP-galactose-4-epimerase; Provisional	100.0
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	100.0
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	100.0
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	100.0
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	100.0
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	100.0
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	100.0
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	100.0
CHL00194	317	ycf39 Ycf39; Provisional	100.0
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	100.0
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	100.0
PRK07201	657	short chain dehydrogenase; Provisional	99.97
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.97
PLN02778	298	3,5-epimerase/4-reductase	99.97
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.97
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.97
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.97
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.97
PLN00016	378	RNA-binding protein; Provisional	99.96
PLN02503	605	fatty acyl-CoA reductase 2	99.96
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.96
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.96
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.96
PRK05865	854	hypothetical protein; Provisional	99.96
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	99.96
PRK06482	276	short chain dehydrogenase; Provisional	99.96
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.95
PRK12320	699	hypothetical protein; Provisional	99.95
PRK06180	277	short chain dehydrogenase; Provisional	99.94
PRK08263	275	short chain dehydrogenase; Provisional	99.94
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.94
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.94
PRK07775	274	short chain dehydrogenase; Provisional	99.94
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.94
PLN02260	668	probable rhamnose biosynthetic enzyme	99.94
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.94
PRK09135	249	pteridine reductase; Provisional	99.93
PRK06182	273	short chain dehydrogenase; Validated	99.93
PRK06138	252	short chain dehydrogenase; Provisional	99.93
PRK07074	257	short chain dehydrogenase; Provisional	99.93
PRK06914	280	short chain dehydrogenase; Provisional	99.93
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.93
PRK07806	248	short chain dehydrogenase; Provisional	99.93
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.93
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.93
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.93
PRK07067	257	sorbitol dehydrogenase; Provisional	99.93
PRK05875	276	short chain dehydrogenase; Provisional	99.93
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.93
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.93
PRK07774	250	short chain dehydrogenase; Provisional	99.93
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.93
PRK12746	254	short chain dehydrogenase; Provisional	99.92
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.92
PRK05993	277	short chain dehydrogenase; Provisional	99.92
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PRK08628	258	short chain dehydrogenase; Provisional	99.92
PRK05876	275	short chain dehydrogenase; Provisional	99.92
PRK06128	300	oxidoreductase; Provisional	99.92
PRK07890	258	short chain dehydrogenase; Provisional	99.92
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK05717	255	oxidoreductase; Validated	99.92
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	99.92
PRK12829	264	short chain dehydrogenase; Provisional	99.92
PLN02253	280	xanthoxin dehydrogenase	99.92
PRK06701	290	short chain dehydrogenase; Provisional	99.92
PRK07060	245	short chain dehydrogenase; Provisional	99.92
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.92
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.92
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.91
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.91
PRK12827	249	short chain dehydrogenase; Provisional	99.91
PRK07024	257	short chain dehydrogenase; Provisional	99.91
PRK08219	227	short chain dehydrogenase; Provisional	99.91
PRK12828	239	short chain dehydrogenase; Provisional	99.91
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK06123	248	short chain dehydrogenase; Provisional	99.91
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.91
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	99.91
PRK06194	287	hypothetical protein; Provisional	99.91
PRK12937	245	short chain dehydrogenase; Provisional	99.91
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PRK06841	255	short chain dehydrogenase; Provisional	99.91
PRK06500	249	short chain dehydrogenase; Provisional	99.91
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK12939	250	short chain dehydrogenase; Provisional	99.91
PRK08264	238	short chain dehydrogenase; Validated	99.91
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.91
PRK09134	258	short chain dehydrogenase; Provisional	99.91
PRK07478	254	short chain dehydrogenase; Provisional	99.9
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.9
PRK06181	263	short chain dehydrogenase; Provisional	99.9
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.9
PRK07035	252	short chain dehydrogenase; Provisional	99.9
PRK07985	294	oxidoreductase; Provisional	99.9
PRK07825	273	short chain dehydrogenase; Provisional	99.9
PRK07856	252	short chain dehydrogenase; Provisional	99.9
PRK08643	256	acetoin reductase; Validated	99.9
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK12747	252	short chain dehydrogenase; Provisional	99.9
PRK07063	260	short chain dehydrogenase; Provisional	99.9
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.9
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.9
PRK08265	261	short chain dehydrogenase; Provisional	99.9
PRK07454	241	short chain dehydrogenase; Provisional	99.9
PRK12743	256	oxidoreductase; Provisional	99.9
PRK06398	258	aldose dehydrogenase; Validated	99.9
PRK06114	254	short chain dehydrogenase; Provisional	99.9
PRK08017	256	oxidoreductase; Provisional	99.9
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.9
PRK05693	274	short chain dehydrogenase; Provisional	99.9
PRK06101	240	short chain dehydrogenase; Provisional	99.9
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.9
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK06196	315	oxidoreductase; Provisional	99.9
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.89
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.89
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.89
PRK05650	270	short chain dehydrogenase; Provisional	99.89
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.89
PRK08589	272	short chain dehydrogenase; Validated	99.89
PRK07814	263	short chain dehydrogenase; Provisional	99.89
PRK06172	253	short chain dehydrogenase; Provisional	99.89
PRK05867	253	short chain dehydrogenase; Provisional	99.89
PRK07109	334	short chain dehydrogenase; Provisional	99.89
PRK08267	260	short chain dehydrogenase; Provisional	99.89
PRK09186	256	flagellin modification protein A; Provisional	99.89
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.89
PRK06523	260	short chain dehydrogenase; Provisional	99.89
PRK07041	230	short chain dehydrogenase; Provisional	99.89
PRK09291	257	short chain dehydrogenase; Provisional	99.89
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.89
PRK12744	257	short chain dehydrogenase; Provisional	99.89
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.89
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK06949	258	short chain dehydrogenase; Provisional	99.89
PRK07577	234	short chain dehydrogenase; Provisional	99.89
PRK12742	237	oxidoreductase; Provisional	99.89
PRK07326	237	short chain dehydrogenase; Provisional	99.89
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.89
PRK08226	263	short chain dehydrogenase; Provisional	99.89
PRK08324	681	short chain dehydrogenase; Validated	99.89
PRK08251	248	short chain dehydrogenase; Provisional	99.89
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.88
PRK07576	264	short chain dehydrogenase; Provisional	99.88
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.88
PRK08278	273	short chain dehydrogenase; Provisional	99.88
PRK05872	296	short chain dehydrogenase; Provisional	99.88
PRK08339	263	short chain dehydrogenase; Provisional	99.88
PRK05866	293	short chain dehydrogenase; Provisional	99.88
PRK07102	243	short chain dehydrogenase; Provisional	99.88
PRK06139	330	short chain dehydrogenase; Provisional	99.88
PRK06057	255	short chain dehydrogenase; Provisional	99.88
PRK07904	253	short chain dehydrogenase; Provisional	99.88
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	99.88
PRK09072	263	short chain dehydrogenase; Provisional	99.88
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.88
PRK09242	257	tropinone reductase; Provisional	99.88
PRK06483	236	dihydromonapterin reductase; Provisional	99.88
PRK07069	251	short chain dehydrogenase; Validated	99.88
PRK06197	306	short chain dehydrogenase; Provisional	99.88
PRK06198	260	short chain dehydrogenase; Provisional	99.87
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	99.87
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.87
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.87
PRK07677	252	short chain dehydrogenase; Provisional	99.87
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.87
PRK07062	265	short chain dehydrogenase; Provisional	99.87
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.87
PRK06924	251	short chain dehydrogenase; Provisional	99.87
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.87
PRK07023	243	short chain dehydrogenase; Provisional	99.86
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.86
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.86
KOG2774	366	consensus NAD dependent epimerase [General functio	99.86
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.86
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.86
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.86
PRK06484	520	short chain dehydrogenase; Validated	99.86
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.86
PRK07831	262	short chain dehydrogenase; Provisional	99.85
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK08703	239	short chain dehydrogenase; Provisional	99.85
PRK07832	272	short chain dehydrogenase; Provisional	99.85
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.85
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.85
PRK06940	275	short chain dehydrogenase; Provisional	99.85
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.85
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK07578	199	short chain dehydrogenase; Provisional	99.85
PRK06953	222	short chain dehydrogenase; Provisional	99.85
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.85
PRK05855	582	short chain dehydrogenase; Validated	99.85
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.85
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.85
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
PRK06125	259	short chain dehydrogenase; Provisional	99.84
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.84
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.84
PRK07791	286	short chain dehydrogenase; Provisional	99.84
PRK05854	313	short chain dehydrogenase; Provisional	99.83
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.83
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.83
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.83
PRK07201	657	short chain dehydrogenase; Provisional	99.83
PRK05599	246	hypothetical protein; Provisional	99.82
PRK08177	225	short chain dehydrogenase; Provisional	99.82
PLN02780	320	ketoreductase/ oxidoreductase	99.82
PRK06484	520	short chain dehydrogenase; Validated	99.82
COG2910	211	Putative NADH-flavin reductase [General function p	99.82
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.82
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.81
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.81
PRK05884	223	short chain dehydrogenase; Provisional	99.81
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.8
PRK12367	245	short chain dehydrogenase; Provisional	99.8
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.8
KOG0725	270	consensus Reductases with broad range of substrate	99.8
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.8
PRK08862	227	short chain dehydrogenase; Provisional	99.79
PRK08303	305	short chain dehydrogenase; Provisional	99.79
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.78
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	99.78
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	99.77
PLN00015	308	protochlorophyllide reductase	99.77
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.76
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.75
KOG1208	314	consensus Dehydrogenases with different specificit	99.73
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.72
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.71
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	99.68
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.67
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.67
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.66
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.66
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.66
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.66
COG1028	251	FabG Dehydrogenases with different specificities (	99.65
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.63
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	99.6
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.6
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.59
KOG4288	283	consensus Predicted oxidoreductase [General functi	99.58
KOG3019	315	consensus Predicted nucleoside-diphosphate sugar e	99.55
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	99.53
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.49
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.47
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.39
PTZ00325	321	malate dehydrogenase; Provisional	99.36
PRK06720	169	hypothetical protein; Provisional	99.32
PLN00106	323	malate dehydrogenase	99.27
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.24
PRK08309	177	short chain dehydrogenase; Provisional	99.2
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	99.08
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.06
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.06
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	98.98
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.97
PRK09620	229	hypothetical protein; Provisional	98.88
PRK05086	312	malate dehydrogenase; Provisional	98.86
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.84
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	98.82
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	98.69
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.6
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.57
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	98.54
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	98.49
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.44
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.44
PRK14982	340	acyl-ACP reductase; Provisional	98.43
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	98.39
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	98.34
PRK05442	326	malate dehydrogenase; Provisional	98.28
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.24
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	98.24
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.22
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	98.21
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.21
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	98.19
COG0569	225	TrkA K+ transport systems, NAD-binding component [	98.16
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	98.09
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	98.08
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	98.02
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.01
PRK06223	307	malate dehydrogenase; Reviewed	97.99
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	97.99
PLN02602	350	lactate dehydrogenase	97.99
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	97.96
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.96
PTZ00082	321	L-lactate dehydrogenase; Provisional	97.96
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	97.95
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.95
COG3268	382	Uncharacterized conserved protein [Function unknow	97.93
PTZ00117	319	malate dehydrogenase; Provisional	97.93
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.89
PRK05671	336	aspartate-semialdehyde dehydrogenase; Reviewed	97.89
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	97.89
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	97.88
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	97.87
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	97.87
PRK00436	343	argC N-acetyl-gamma-glutamyl-phosphate reductase;	97.84
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	97.83
KOG1494	345	consensus NAD-dependent malate dehydrogenase [Ener	97.83
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	97.82
PRK09496	453	trkA potassium transporter peripheral membrane com	97.82
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.76
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.76
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.76
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	97.76
COG4982	866	3-oxoacyl-[acyl-carrier protein]	97.71
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	97.7
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.65
TIGR01850	346	argC N-acetyl-gamma-glutamyl-phosphate reductase,	97.63
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	97.6
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	97.59
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	97.5
PRK08664	349	aspartate-semialdehyde dehydrogenase; Reviewed	97.48
TIGR01296	339	asd_B aspartate-semialdehyde dehydrogenase (peptid	97.48
PRK00048	257	dihydrodipicolinate reductase; Provisional	97.47
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.47
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	97.42
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	97.41
cd01339	300	LDH-like_MDH L-lactate dehydrogenase-like malate d	97.41
PLN02383	344	aspartate semialdehyde dehydrogenase	97.39
PRK06728	347	aspartate-semialdehyde dehydrogenase; Provisional	97.38
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	97.36
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.31
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.27
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	97.27
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	97.27
TIGR01771	299	L-LDH-NAD L-lactate dehydrogenase. This model repr	97.27
PRK04148	134	hypothetical protein; Provisional	97.26
PRK11863	313	N-acetyl-gamma-glutamyl-phosphate reductase; Provi	97.26
PRK10669	558	putative cation:proton antiport protein; Provision	97.26
PRK09496	453	trkA potassium transporter peripheral membrane com	97.26
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	97.22
PRK08040	336	putative semialdehyde dehydrogenase; Provisional	97.21
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	97.2
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.19
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.18
PRK08328	231	hypothetical protein; Provisional	97.18
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	97.17
PRK03659	601	glutathione-regulated potassium-efflux system prot	97.16
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.15
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	97.15
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.14
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.12
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.07
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	97.07
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	97.07
PRK06019	372	phosphoribosylaminoimidazole carboxylase ATPase su	97.04
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.04
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.98
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	96.97
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.97
COG0002	349	ArgC Acetylglutamate semialdehyde dehydrogenase [A	96.96
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.96
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.96
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	96.94
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.94
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	96.94
PRK08655	437	prephenate dehydrogenase; Provisional	96.93
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.93
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.93
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.93
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.92
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.92
PLN02353	473	probable UDP-glucose 6-dehydrogenase	96.91
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.91
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	96.91
PRK08223	287	hypothetical protein; Validated	96.91
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.89
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	96.88
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	96.88
PRK03562	621	glutathione-regulated potassium-efflux system prot	96.88
TIGR01851	310	argC_other N-acetyl-gamma-glutamyl-phosphate reduc	96.87
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.87
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.86
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.86
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.85
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.85
COG0026	375	PurK Phosphoribosylaminoimidazole carboxylase (NCA	96.85
cd01484	234	E1-2_like Ubiquitin activating enzyme (E1), repeat	96.78
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.78
PF13380	116	CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5	96.75
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.75
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.74
TIGR00978	341	asd_EA aspartate-semialdehyde dehydrogenase (non-p	96.73
COG0240	329	GpsA Glycerol-3-phosphate dehydrogenase [Energy pr	96.73
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.73
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	96.73
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.69
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.68
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.68
COG1712	255	Predicted dinucleotide-utilizing enzyme [General f	96.65
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.63
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	96.62
PF01210	157	NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate	96.61
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.61
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.6
PRK06849	389	hypothetical protein; Provisional	96.6
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.58
PRK07878	392	molybdopterin biosynthesis-like protein MoeZ; Vali	96.58
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	96.58
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	96.58
smart00859	122	Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin	96.58
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.57
PRK06598	369	aspartate-semialdehyde dehydrogenase; Reviewed	96.55
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	96.54
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	96.53
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.52
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.51
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	96.51
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.51
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.5
PRK07877	722	hypothetical protein; Provisional	96.49
COG0136	334	Asd Aspartate-semialdehyde dehydrogenase [Amino ac	96.49
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.47
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	96.47
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.47
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.46
KOG0172	445	consensus Lysine-ketoglutarate reductase/saccharop	96.44
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.44
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.41
PRK07417	279	arogenate dehydrogenase; Reviewed	96.41
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.39
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.38
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.38
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	96.38
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.37
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.37
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	96.37
COG0289	266	DapB Dihydrodipicolinate reductase [Amino acid tra	96.36
KOG1496	332	consensus Malate dehydrogenase [Energy production	96.35
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.33
TIGR01142	380	purT phosphoribosylglycinamide formyltransferase 2	96.32
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	96.31
PRK13302	271	putative L-aspartate dehydrogenase; Provisional	96.3
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.3
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.3
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.29
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.25
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.24
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.22
PRK07411	390	hypothetical protein; Validated	96.21
PRK13304	265	L-aspartate dehydrogenase; Reviewed	96.19
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.19
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.18
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.18
cd01486	307	Apg7 Apg7 is an E1-like protein, that activates tw	96.17
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	96.16

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=100.00  E-value=5.4e-45  Score=298.03  Aligned_cols=272  Identities=48%  Similarity=0.807  Sum_probs=237.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|||||||||+++++.|+++||.|.+.+|++     .+.++...+.+++...++.+.+.+|++|++.+...++++
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~-----~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gc   79 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDP-----EDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGC   79 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCc-----chhhhHHHHHhcccCcccceEEeccccccchHHHHHhCC
Confidence            468999999999999999999999999999999999     555666678888877778999999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeecc---CCCCcccccCCCCchhhhhh
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN---DKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~---~~~~~~~~e~~~~~~~~~~~  160 (285)
                      |.|+|.|.++.....+++.+..+.++.|+.|++++|++..+++|||++||.++....   ......++|+.|.+.+++..
T Consensus        80 dgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~  159 (327)
T KOG1502|consen   80 DGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRC  159 (327)
T ss_pred             CEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHh
Confidence            999999999998655566689999999999999999999889999999999988765   23556899999988877654


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                      -.   .-|..||..+|+..++++.+.++..+.+.|+.|+||...+..+.........+.|....+. .....|+|++|+|
T Consensus       160 ~~---~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~-n~~~~~VdVrDVA  235 (327)
T KOG1502|consen  160 KK---LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYP-NFWLAFVDVRDVA  235 (327)
T ss_pred             hH---HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCC-CCceeeEeHHHHH
Confidence            33   5699999999999999999999999999999999998777655666666777777554444 3344599999999


Q ss_pred             HHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCCCC
Q 023244          241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTV  284 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~  284 (285)
                      .+.+.+++++...|+|+|.++..++.|+++.+.+.+|.+++|..
T Consensus       236 ~AHv~a~E~~~a~GRyic~~~~~~~~ei~~~l~~~~P~~~ip~~  279 (327)
T KOG1502|consen  236 LAHVLALEKPSAKGRYICVGEVVSIKEIADILRELFPDYPIPKK  279 (327)
T ss_pred             HHHHHHHcCcccCceEEEecCcccHHHHHHHHHHhCCCCCCCCC
Confidence            99999999999999999999988899999999999999888754

>PLN02650 dihydroflavonol-4-reductase

Probab=100.00  E-value=5e-42  Score=295.68  Aligned_cols=276  Identities=49%  Similarity=0.882  Sum_probs=204.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |-++.|+|||||||||||++|+++|+++|++|++++|+..     .......+...+....++.++.+|++|.+.+.+++
T Consensus         1 ~~~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~   75 (351)
T PLN02650          1 MGSQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPA-----NVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI   75 (351)
T ss_pred             CCCCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcc-----hhHHHHHHHhccCCCCceEEEEecCCChhhHHHHH
Confidence            6667899999999999999999999999999999999761     11111111111111236889999999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +++|+|||+|+.......++....+++|+.++.++++++++.+.+++|||+||.++++........++|+.+...+....
T Consensus        76 ~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (351)
T PLN02650         76 RGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRR  155 (351)
T ss_pred             hCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhc
Confidence            99999999999765433344347889999999999999998764689999999977655432223357776543333222


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                      ...+.++|+.||.++|.+++.+++.+|++++++||+++|||+........+........+....+.....++|+|++|+|
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva  235 (351)
T PLN02650        156 KKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLC  235 (351)
T ss_pred             cccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHH
Confidence            23345689999999999999999888999999999999999765433222222112222332222223457999999999


Q ss_pred             HHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCC
Q 023244          241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPI  281 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~  281 (285)
                      ++++.+++++...+.|++++..+|+.|+++.+.+.++...+
T Consensus       236 ~a~~~~l~~~~~~~~~i~~~~~~s~~el~~~i~~~~~~~~~  276 (351)
T PLN02650        236 NAHIFLFEHPAAEGRYICSSHDATIHDLAKMLREKYPEYNI  276 (351)
T ss_pred             HHHHHHhcCcCcCceEEecCCCcCHHHHHHHHHHhCcccCC
Confidence            99999998776667888888889999999999998875433

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.3e-42  Score=276.69  Aligned_cols=248  Identities=22%  Similarity=0.264  Sum_probs=202.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+||||||+||||++.|.+|++.|++|+++++-..       .....+...     .++++++|+.|.+.++++|+  ++
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~-------g~~~~v~~~-----~~~f~~gDi~D~~~L~~vf~~~~i   68 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSN-------GHKIALLKL-----QFKFYEGDLLDRALLTAVFEENKI   68 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCC-------CCHHHhhhc-----cCceEEeccccHHHHHHHHHhcCC
Confidence            57999999999999999999999999999998541       122222211     16899999999999999997  48


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+||....  +.++|. ++++.|+.+|.+|+++|++.+ +++|||.||+.+|+.+  ...|++|+.+.        
T Consensus        69 daViHFAa~~~VgESv~~Pl-~Yy~NNv~gTl~Ll~am~~~g-v~~~vFSStAavYG~p--~~~PI~E~~~~--------  136 (329)
T COG1087          69 DAVVHFAASISVGESVQNPL-KYYDNNVVGTLNLIEAMLQTG-VKKFIFSSTAAVYGEP--TTSPISETSPL--------  136 (329)
T ss_pred             CEEEECccccccchhhhCHH-HHHhhchHhHHHHHHHHHHhC-CCEEEEecchhhcCCC--CCcccCCCCCC--------
Confidence            999999998776  556776 999999999999999999999 9999999999987655  34799999986        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCC-------CCCccHHHHHHHHhcCccccc-------c
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICP-------KFAGSVRSSLALILGNREEYG-------F  227 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~-------~  227 (285)
                       .|.+|||.||.+.|++++++++.++++++++|..++.|-.+.+       ..+..++...+...|+...+.       .
T Consensus       137 -~p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T  215 (329)
T COG1087         137 -APINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDT  215 (329)
T ss_pred             -CCCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCC
Confidence             4678899999999999999999999999999999998854332       244566666666666654222       1


Q ss_pred             ---ccCcceeeHHHHHHHHHHhhcCCCCC---ceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          228 ---LLNTSMVHVDDVARAHIFLLEYPDAK---GRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 ---~~~~~~i~~~D~a~~~~~~~~~~~~~---~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                         ...|||||+.|+|.+.+.+++.-..+   .+||++ |..+|+.|+++.+.+..|+
T Consensus       216 ~DGT~iRDYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~  273 (329)
T COG1087         216 KDGTCIRDYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGR  273 (329)
T ss_pred             CCCCeeeeeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCC
Confidence               33899999999999999998753322   368875 5799999999999999985

>PLN02214 cinnamoyl-CoA reductase

Probab=100.00  E-value=1.6e-40  Score=284.73  Aligned_cols=264  Identities=39%  Similarity=0.670  Sum_probs=202.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|||||||||||++++++|+++|++|++++|+..     .. ....+..+.....++.++.+|++|.+.+.++++++
T Consensus         9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~-----~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (342)
T PLN02214          9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPD-----DP-KNTHLRELEGGKERLILCKADLQDYEALKAAIDGC   82 (342)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCch-----hh-hHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcC
Confidence            4678999999999999999999999999999999761     10 11111222111236888999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC--CCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+...   .++ ...++.|+.++.+++++|++.+ +++||++||..++++...  ...+++|++|...+.   +
T Consensus        83 d~Vih~A~~~~---~~~-~~~~~~nv~gt~~ll~aa~~~~-v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~---~  154 (342)
T PLN02214         83 DGVFHTASPVT---DDP-EQMVEPAVNGAKFVINAAAEAK-VKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDF---C  154 (342)
T ss_pred             CEEEEecCCCC---CCH-HHHHHHHHHHHHHHHHHHHhcC-CCEEEEeccceeeeccCCCCCCcccCcccCCChhh---c
Confidence            99999999753   244 4889999999999999999988 899999999754443222  123578887643221   1


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVAR  241 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  241 (285)
                      ..+.+.|+.||.++|.+++.+++++|++++++||++||||+........+..+.....+....+ .+..++|||++|+|+
T Consensus       155 ~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~i~V~Dva~  233 (342)
T PLN02214        155 KNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTY-ANLTQAYVDVRDVAL  233 (342)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccC-CCCCcCeeEHHHHHH
Confidence            2345689999999999999998888999999999999999865433333333333344443333 356789999999999


Q ss_pred             HHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          242 AHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      +++.+++++..++.||++++..++.|+++.+++.+|..++|
T Consensus       234 a~~~al~~~~~~g~yn~~~~~~~~~el~~~i~~~~~~~~~~  274 (342)
T PLN02214        234 AHVLVYEAPSASGRYLLAESARHRGEVVEILAKLFPEYPLP  274 (342)
T ss_pred             HHHHHHhCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence            99999998766778998877899999999999999865443

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=1.8e-40  Score=282.91  Aligned_cols=272  Identities=40%  Similarity=0.664  Sum_probs=205.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+|+|||||||||||++++++|+++|++|+++.|+.     ...+....+........+++++.+|++|++.+.+++
T Consensus         1 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   75 (322)
T PLN02986          1 MNGGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDL-----TDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAI   75 (322)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCC-----cchHHHHHHHhccCCCCceEEEecCCCCcchHHHHH
Confidence            554568999999999999999999999999999999976     111111111111111247899999999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC---CCcccccCCCCchhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK---DVDMMDETFWSDVDY  157 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~e~~~~~~~~  157 (285)
                      +++|+|||+|+.......++....++.|+.++.++++++++...+++||++||.+++.+...   ...+++|++|..+..
T Consensus        76 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~  155 (322)
T PLN02986         76 EGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSL  155 (322)
T ss_pred             hCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHH
Confidence            99999999999865543444446789999999999999988633899999999986543221   234578887754322


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHH
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVD  237 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  237 (285)
                      .   ..+.+.|+.||.++|.+++.++++++++++++||+++|||............+.....+.. .+ ....++|+|++
T Consensus       156 ~---~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~-~~-~~~~~~~v~v~  230 (322)
T PLN02986        156 C---RETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKN-LF-NNRFYRFVDVR  230 (322)
T ss_pred             h---hccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCC-CC-CCcCcceeEHH
Confidence            1   1234679999999999999999888999999999999999765432222222233333332 22 24567999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      |+|++++.+++++..++.||++++.+|+.|+++.+.+.+|...+|
T Consensus       231 Dva~a~~~al~~~~~~~~yni~~~~~s~~e~~~~i~~~~~~~~~~  275 (322)
T PLN02986        231 DVALAHIKALETPSANGRYIIDGPIMSVNDIIDILRELFPDLCIA  275 (322)
T ss_pred             HHHHHHHHHhcCcccCCcEEEecCCCCHHHHHHHHHHHCCCCCCC
Confidence            999999999998776678998888899999999999999865444

>PLN00198 anthocyanidin reductase; Provisional

Probab=100.00  E-value=2.5e-40  Score=283.82  Aligned_cols=270  Identities=44%  Similarity=0.722  Sum_probs=200.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+||||||+||||++|+++|+++|++|+++.|+..     .......+..+.. ..++.++.+|++|.+.+.++++++
T Consensus         8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~   81 (338)
T PLN00198          8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPE-----NQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIAGC   81 (338)
T ss_pred             CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCC-----CHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHhcC
Confidence            4689999999999999999999999999999998761     1111111111111 126889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC--CCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+.......++...++++|+.++.++++++++.+.+++||++||.++|+....  ...+++|+.+.........
T Consensus        82 d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~  161 (338)
T PLN00198         82 DLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSE  161 (338)
T ss_pred             CEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhc
Confidence            99999999765433445446789999999999999988643889999999988864421  2345666654332222222


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc-------ccCccee
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF-------LLNTSMV  234 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i  234 (285)
                      .+|.++|+.||.++|.+++.+++.++++++++||++||||+.....+..+..+.....+....+..       ++.++|+
T Consensus       162 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i  241 (338)
T PLN00198        162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISIT  241 (338)
T ss_pred             CCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCccee
Confidence            346678999999999999999988899999999999999986543444333323333333221111       2347999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~  279 (285)
                      |++|+|++++.+++.....+.|++++..+++.|+++.+.+.++..
T Consensus       242 ~V~D~a~a~~~~~~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~~  286 (338)
T PLN00198        242 HVEDVCRAHIFLAEKESASGRYICCAANTSVPELAKFLIKRYPQY  286 (338)
T ss_pred             EHHHHHHHHHHHhhCcCcCCcEEEecCCCCHHHHHHHHHHHCCCC
Confidence            999999999999987655567887888899999999999988753

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=6.2e-40  Score=279.73  Aligned_cols=268  Identities=41%  Similarity=0.668  Sum_probs=199.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..     .......+.......++++++.+|++|++.+.++++++
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPN-----DPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGC   77 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCC-----chhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCC
Confidence            4689999999999999999999999999999999761     11111112111111247899999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceee-ec-cCC-CCcccccCCCCchhhhh
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAV-FY-NDK-DVDMMDETFWSDVDYIR  159 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~-~~-~~~-~~~~~~e~~~~~~~~~~  159 (285)
                      |+|||+|+.......++...++++|+.++.++++++++. + +++||++||.+++ ++ .+. ...+++|+.+..+... 
T Consensus        78 d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~-~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~-  155 (322)
T PLN02662         78 EGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPS-VKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFC-  155 (322)
T ss_pred             CEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHh-
Confidence            999999998655434443478899999999999999887 6 8999999998753 22 211 2345777765432211 


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV  239 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  239 (285)
                        ....+.|+.+|.++|.+++.++++++++++++||+++|||+...........+...+.+.. .+ ++..++|||++|+
T Consensus       156 --~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~i~v~Dv  231 (322)
T PLN02662        156 --EESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQ-TF-PNASYRWVDVRDV  231 (322)
T ss_pred             --hcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCc-cC-CCCCcCeEEHHHH
Confidence              1123579999999999999998888999999999999999754432222222333333322 22 2567899999999


Q ss_pred             HHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      |++++.+++++...+.||+++..+|+.|+++.+.+.++..++|
T Consensus       232 a~a~~~~~~~~~~~~~~~~~g~~~s~~e~~~~i~~~~~~~~~~  274 (322)
T PLN02662        232 ANAHIQAFEIPSASGRYCLVERVVHYSEVVKILHELYPTLQLP  274 (322)
T ss_pred             HHHHHHHhcCcCcCCcEEEeCCCCCHHHHHHHHHHHCCCCCCC
Confidence            9999999998766678888788899999999999988765443

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=3e-40  Score=261.88  Aligned_cols=255  Identities=20%  Similarity=0.180  Sum_probs=209.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      |++|||||.||||+++++.++++..  +|+.++.-.   ..   .....+..+ ...++..|+++|++|.+.+.++++  
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLT---YA---gn~~~l~~~-~~~~~~~fv~~DI~D~~~v~~~~~~~   73 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLT---YA---GNLENLADV-EDSPRYRFVQGDICDRELVDRLFKEY   73 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEeccc---cc---CCHHHHHhh-hcCCCceEEeccccCHHHHHHHHHhc
Confidence            5799999999999999999998754  466666522   11   112222222 123589999999999999999998  


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|+|+||-.+.  +...| ..++++|+.||.+|++++++....-||+++||.-||+........++|++|.      
T Consensus        74 ~~D~VvhfAAESHVDRSI~~P-~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~------  146 (340)
T COG1088          74 QPDAVVHFAAESHVDRSIDGP-APFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPY------  146 (340)
T ss_pred             CCCeEEEechhccccccccCh-hhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCC------
Confidence            59999999998887  44566 4999999999999999999997234999999999987776666689999987      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHH-HHHHHHhcCcccccc--ccCcceeeH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR-SSLALILGNREEYGF--LLNTSMVHV  236 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~~  236 (285)
                         .|.+||++||+.++.+++++.+.+|++++|.|+++-|||.+.+-  .+++ .+...+.|.+.++-+  .+.|||+|+
T Consensus       147 ---~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~V  221 (340)
T COG1088         147 ---NPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLYV  221 (340)
T ss_pred             ---CCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCceecCCcceeeeEEe
Confidence               46789999999999999999999999999999999999976442  2333 345677788766554  668999999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          237 DDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       237 ~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      +|=|+++..+++++..+.+||+++ ...+.-|+++.|.+.+++.
T Consensus       222 eDh~~ai~~Vl~kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~  265 (340)
T COG1088         222 EDHCRAIDLVLTKGKIGETYNIGGGNERTNLEVVKTICELLGKD  265 (340)
T ss_pred             HhHHHHHHHHHhcCcCCceEEeCCCccchHHHHHHHHHHHhCcc
Confidence            999999999999998888999766 5789999999999999863

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=100.00  E-value=2.6e-39  Score=276.10  Aligned_cols=269  Identities=39%  Similarity=0.682  Sum_probs=202.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+|+||||||+||||++++++|+++|++|++++|+..     .......+........+++++.+|++|.+.+.+++
T Consensus         1 ~~~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   75 (325)
T PLN02989          1 MADGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPK-----DRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI   75 (325)
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCc-----chhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH
Confidence            5656799999999999999999999999999999988862     11111111111111247889999999999999999


Q ss_pred             cCCCEEEEecccCCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC---CCcccccCCCCchh
Q 023244           81 AGCTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK---DVDMMDETFWSDVD  156 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~e~~~~~~~  156 (285)
                      +++|+|||+|+..... ..+.....+++|+.++.++++++.+....++||++||..++++...   ...+++|+++..+.
T Consensus        76 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~  155 (325)
T PLN02989         76 DGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPS  155 (325)
T ss_pred             cCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchh
Confidence            9999999999975432 1223358899999999999999988633789999999987765421   23467888775432


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeH
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHV  236 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  236 (285)
                      ..   ..+.++|+.||.++|.+++.+++.++++++++||+++|||+...........+.....+.. .+. ...++|+|+
T Consensus       156 ~~---~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~-~~~-~~~r~~i~v  230 (325)
T PLN02989        156 FA---EERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKN-PFN-TTHHRFVDV  230 (325)
T ss_pred             Hh---cccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCC-CCC-CcCcCeeEH
Confidence            21   1224679999999999999998888999999999999999865432222222333333332 222 345799999


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCC
Q 023244          237 DDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       237 ~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~  279 (285)
                      +|+|++++.+++++...+.||++++.+|+.|+++.+.+.+|..
T Consensus       231 ~Dva~a~~~~l~~~~~~~~~ni~~~~~s~~ei~~~i~~~~~~~  273 (325)
T PLN02989        231 RDVALAHVKALETPSANGRYIIDGPVVTIKDIENVLREFFPDL  273 (325)
T ss_pred             HHHHHHHHHHhcCcccCceEEEecCCCCHHHHHHHHHHHCCCC
Confidence            9999999999987766678998888999999999999998743

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=100.00  E-value=7.2e-40  Score=281.60  Aligned_cols=257  Identities=18%  Similarity=0.153  Sum_probs=194.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|||||||||||++|+++|+++|++|++++|....    ........ ..... ...++.++.+|++|.+.+..+++
T Consensus        14 ~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         14 APKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTG----YQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCc----chhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            35899999999999999999999999999999986510    00001111 01100 11368899999999999999999


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+|+....  ...++. .++++|+.++.+++++|++.+ +++|||+||.++|+...  ..+..|+++.      
T Consensus        90 ~~d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nll~~~~~~~-~~~~v~~SS~~vyg~~~--~~~~~e~~~~------  159 (348)
T PRK15181         90 NVDYVLHQAALGSVPRSLKDPI-ATNSANIDGFLNMLTAARDAH-VSSFTYAASSSTYGDHP--DLPKIEERIG------  159 (348)
T ss_pred             CCCEEEECccccCchhhhhCHH-HHHHHHHHHHHHHHHHHHHcC-CCeEEEeechHhhCCCC--CCCCCCCCCC------
Confidence            99999999997654  234554 789999999999999999998 99999999998875432  3344555432      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHH-HHhcCcccccc--ccCccee
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLA-LILGNREEYGF--LLNTSMV  234 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i  234 (285)
                         .|.++|+.||.++|.+++.+.+.++++++++||+++|||++...  ....+..+.. ...+....+..  ...++|+
T Consensus       160 ---~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i  236 (348)
T PRK15181        160 ---RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFC  236 (348)
T ss_pred             ---CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeE
Confidence               35578999999999999998878899999999999999976432  2234444443 34444433332  5579999


Q ss_pred             eHHHHHHHHHHhhcCCC---CCceEEEec-cccCHHHHHHHHHhhCC
Q 023244          235 HVDDVARAHIFLLEYPD---AKGRYICSS-HTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~---~~~~~~~~~-~~~s~~e~~~~i~~~~~  277 (285)
                      |++|+|++++.++..+.   .+++||+++ +.+|+.|+++.+.+.++
T Consensus       237 ~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~  283 (348)
T PRK15181        237 YIENVIQANLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLN  283 (348)
T ss_pred             EHHHHHHHHHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhC
Confidence            99999999998776432   356899755 68999999999998776

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=8.5e-39  Score=275.76  Aligned_cols=266  Identities=41%  Similarity=0.734  Sum_probs=197.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ..|+||||||+||||++++++|+++|++|++++|+.        ..... ..... ...+++++.+|++|.+.+.+++++
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~   79 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDP--------AKSLHLLSKWK-EGDRLRLFRADLQEEGSFDEAVKG   79 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHhhc-cCCeEEEEECCCCCHHHHHHHHcC
Confidence            568999999999999999999999999999999876        22221 11211 124688999999999999999999


Q ss_pred             CCEEEEecccCCCC----CCChH----HHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC---CcccccCC
Q 023244           83 CTGVLHVATPVDFE----DKEPE----EVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD---VDMMDETF  151 (285)
Q Consensus        83 ~d~vih~a~~~~~~----~~~~~----~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~---~~~~~e~~  151 (285)
                      +|+|||+|+.....    ..++.    ...++.|+.++.+++++|++.+.+++||++||.++|+.....   ..+++|+.
T Consensus        80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~  159 (353)
T PLN02896         80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETC  159 (353)
T ss_pred             CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCccc
Confidence            99999999986532    11222    134455679999999999887447899999999887643221   13567764


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc----
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF----  227 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----  227 (285)
                      +...+......++.++|+.||.++|.++..+++.++++++++||++||||+.....+..+..+...+.+....+..    
T Consensus       160 ~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  239 (353)
T PLN02896        160 QTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAV  239 (353)
T ss_pred             CCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccccccc
Confidence            3322211112234467999999999999999988899999999999999987655554444444333343322211    


Q ss_pred             ---ccCcceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          228 ---LLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 ---~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                         .+.++|||++|+|++++.+++.+...+.|++++..+++.|+++.+.+.++.
T Consensus       240 ~~~~~~~dfi~v~Dva~a~~~~l~~~~~~~~~~~~~~~~s~~el~~~i~~~~~~  293 (353)
T PLN02896        240 NSRMGSIALVHIEDICDAHIFLMEQTKAEGRYICCVDSYDMSELINHLSKEYPC  293 (353)
T ss_pred             ccccCceeEEeHHHHHHHHHHHHhCCCcCccEEecCCCCCHHHHHHHHHHhCCC
Confidence               124699999999999999998765566788888899999999999998874

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=100.00  E-value=7.7e-38  Score=259.53  Aligned_cols=250  Identities=30%  Similarity=0.340  Sum_probs=186.8

Q ss_pred             EEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCEE
Q 023244            9 CVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGV   86 (285)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   86 (285)
                      |||||+||||++|+++|+++|  ++|.++++...     . .....+...    +...++.+|++|++++.++++++|+|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~-----~-~~~~~~~~~----~~~~~~~~Di~d~~~l~~a~~g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPP-----P-KFLKDLQKS----GVKEYIQGDITDPESLEEALEGVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccc-----c-ccchhhhcc----cceeEEEeccccHHHHHHHhcCCceE
Confidence            699999999999999999999  78999998761     1 111112222    23348999999999999999999999


Q ss_pred             EEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCc--ccccCCCCchhhhhhcCCC
Q 023244           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~--~~~e~~~~~~~~~~~~~~~  164 (285)
                      ||+|++.......+.+.++++|+.||++++++|++.+ +++|||+||.+++........  ..+|+.+..       ..+
T Consensus        71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~-------~~~  142 (280)
T PF01073_consen   71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYP-------SSP  142 (280)
T ss_pred             EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcCcceeEeccCCCCcccCCcCCccc-------ccc
Confidence            9999988775545556899999999999999999998 999999999998876322222  235555432       225


Q ss_pred             CchhHhhHHHHHHHHHHHHH---Hc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc-cccc-cccCcceeeHH
Q 023244          165 GKSYAISKTLTERAALEFAE---EH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR-EEYG-FLLNTSMVHVD  237 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~---~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~~~  237 (285)
                      .+.|+.||.++|+++.+...   +.  .+.+++|||+.||||+.....+.......   .+.. ..+. .....+|+|++
T Consensus       143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~---~g~~~~~~g~~~~~~~~vyV~  219 (280)
T PF01073_consen  143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVR---SGLFLFQIGDGNNLFDFVYVE  219 (280)
T ss_pred             cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHH---hcccceeecCCCceECcEeHH
Confidence            67899999999999988764   22  49999999999999986654443333222   1211 1122 24568999999


Q ss_pred             HHHHHHHHhhcC---C----CCCc-eEEEec-cccC-HHHHHHHHHhhCCCC
Q 023244          238 DVARAHIFLLEY---P----DAKG-RYICSS-HTLT-IQEMAEFLSAKYPEY  279 (285)
Q Consensus       238 D~a~~~~~~~~~---~----~~~~-~~~~~~-~~~s-~~e~~~~i~~~~~~~  279 (285)
                      |+|.+.+.+.+.   +    ...| .|++++ ++.. +.|+.+.+.+.+|..
T Consensus       220 NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~  271 (280)
T PF01073_consen  220 NVAHAHVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYP  271 (280)
T ss_pred             HHHHHHHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCC
Confidence            999999887642   2    2234 677765 5777 999999999999863

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02427 UDP-apiose/xylose synthase

Probab=100.00  E-value=1.8e-37  Score=270.56  Aligned_cols=262  Identities=17%  Similarity=0.208  Sum_probs=191.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCC--CCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..|+|||||||||||++|+++|+++ |++|++++|+.        +....+....  ....+++++.+|++|.+.+.+++
T Consensus        13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~--------~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~   84 (386)
T PLN02427         13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYN--------DKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLI   84 (386)
T ss_pred             cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCc--------hhhhhhhccccccCCCCeEEEEcCCCChHHHHHHh
Confidence            3578999999999999999999998 59999999875        2222222111  11247999999999999999999


Q ss_pred             cCCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh-
Q 023244           81 AGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY-  157 (285)
Q Consensus        81 ~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~-  157 (285)
                      +++|+|||+|+....  ...++. ..+..|+.++.+++++|++.+  ++|||+||.++|+...  ..+++|+.+...++ 
T Consensus        85 ~~~d~ViHlAa~~~~~~~~~~~~-~~~~~n~~gt~~ll~aa~~~~--~r~v~~SS~~vYg~~~--~~~~~e~~p~~~~~~  159 (386)
T PLN02427         85 KMADLTINLAAICTPADYNTRPL-DTIYSNFIDALPVVKYCSENN--KRLIHFSTCEVYGKTI--GSFLPKDHPLRQDPA  159 (386)
T ss_pred             hcCCEEEEcccccChhhhhhChH-HHHHHHHHHHHHHHHHHHhcC--CEEEEEeeeeeeCCCc--CCCCCcccccccccc
Confidence            999999999997554  223443 567789999999999998876  7999999999875432  12334443322110 


Q ss_pred             ------------hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCC---------CCCccHHHHHH
Q 023244          158 ------------IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICP---------KFAGSVRSSLA  216 (285)
Q Consensus       158 ------------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~---------~~~~~~~~~~~  216 (285)
                                  ..+...+.+.|+.||.++|.++..+++.++++++++||++||||+...         ..+..+..+..
T Consensus       160 ~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~  239 (386)
T PLN02427        160 FYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSN  239 (386)
T ss_pred             cccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHH
Confidence                        011112346799999999999999887789999999999999997531         11223333333


Q ss_pred             H-HhcCcccccc--ccCcceeeHHHHHHHHHHhhcCCC--CCceEEEec--cccCHHHHHHHHHhhCCC
Q 023244          217 L-ILGNREEYGF--LLNTSMVHVDDVARAHIFLLEYPD--AKGRYICSS--HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       217 ~-~~~~~~~~~~--~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~--~~~s~~e~~~~i~~~~~~  278 (285)
                      . ..+.+..+..  ...++|+|++|+|++++.+++++.  .+++||+++  +.+|+.|+++.+.+.+|.
T Consensus       240 ~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~  308 (386)
T PLN02427        240 NLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK  308 (386)
T ss_pred             HHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence            3 3343332222  456899999999999999998763  345799775  389999999999998874

>PLN02583 cinnamoyl-CoA reductase

Probab=100.00  E-value=5.3e-37  Score=258.24  Aligned_cols=263  Identities=27%  Similarity=0.480  Sum_probs=198.0

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ..+|+|||||||||||++++++|+++|++|++++|+.     ...+....+..+.....++.++.+|++|.+.+.+++.+
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~-----~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~   78 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN-----GETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKG   78 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc-----hhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcC
Confidence            3568899999999999999999999999999999964     11111122222221234688999999999999999999


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeecc-C--CCCcccccCCCCchhhhh
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN-D--KDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~-~--~~~~~~~e~~~~~~~~~~  159 (285)
                      +|.|+|+++.......++ +.++++|+.++.++++++.+...+++||++||..++.+. .  ....+++|++|.......
T Consensus        79 ~d~v~~~~~~~~~~~~~~-~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~  157 (297)
T PLN02583         79 CSGLFCCFDPPSDYPSYD-EKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCR  157 (297)
T ss_pred             CCEEEEeCccCCcccccH-HHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHh
Confidence            999999876544322233 488999999999999999886337999999999876432 1  123467888775444322


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV  239 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~  239 (285)
                         .+...|+.||.++|.+++.+++..+++++++||++||||+......        .+.+....+ ..+.++|||++|+
T Consensus       158 ---~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~~--------~~~~~~~~~-~~~~~~~v~V~Dv  225 (297)
T PLN02583        158 ---KFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHNP--------YLKGAAQMY-ENGVLVTVDVNFL  225 (297)
T ss_pred             ---hcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCchh--------hhcCCcccC-cccCcceEEHHHH
Confidence               1223699999999999999987789999999999999997543211        111111111 2445689999999


Q ss_pred             HHHHHHhhcCCCCCceEEEeccccC-HHHHHHHHHhhCCCCCCCC
Q 023244          240 ARAHIFLLEYPDAKGRYICSSHTLT-IQEMAEFLSAKYPEYPIPT  283 (285)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~~~~~~s-~~e~~~~i~~~~~~~~~~~  283 (285)
                      |++++.+++.+...+.|+++++..+ +.++++++.+.+|..++|.
T Consensus       226 a~a~~~al~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  270 (297)
T PLN02583        226 VDAHIRAFEDVSSYGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPP  270 (297)
T ss_pred             HHHHHHHhcCcccCCcEEEecCCCccHHHHHHHHHHhCCCCCCCC
Confidence            9999999998877789998887654 6789999999999887764

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=100.00  E-value=1.9e-37  Score=266.83  Aligned_cols=254  Identities=20%  Similarity=0.256  Sum_probs=190.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC-ChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~   82 (285)
                      ||+|||||||||||++|+++|++. |++|++++|+.        .....+..    ..+++++.+|++ +.+.+.+++++
T Consensus         1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~--------~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~~   68 (347)
T PRK11908          1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQT--------DRLGDLVN----HPRMHFFEGDITINKEWIEYHVKK   68 (347)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcH--------HHHHHhcc----CCCeEEEeCCCCCCHHHHHHHHcC
Confidence            368999999999999999999986 69999999865        22111111    236899999998 67788888899


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCC-Cchhhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW-SDVDYIR  159 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~-~~~~~~~  159 (285)
                      +|+|||+|+....  ...++. ..+++|+.++.+++++|++.+  ++|||+||..+|+...  ..+++|+++ ...   .
T Consensus        69 ~d~ViH~aa~~~~~~~~~~p~-~~~~~n~~~~~~ll~aa~~~~--~~~v~~SS~~vyg~~~--~~~~~ee~~~~~~---~  140 (347)
T PRK11908         69 CDVILPLVAIATPATYVKQPL-RVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMCP--DEEFDPEASPLVY---G  140 (347)
T ss_pred             CCEEEECcccCChHHhhcCcH-HHHHHHHHHHHHHHHHHHhcC--CeEEEEecceeeccCC--CcCcCcccccccc---C
Confidence            9999999997553  234554 788999999999999999877  6999999998875432  234555442 110   1


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC------CCccHHHHHH-HHhcCccccc--cccC
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSLA-LILGNREEYG--FLLN  230 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~------~~~~~~~~~~-~~~~~~~~~~--~~~~  230 (285)
                      +...|.+.|+.+|.++|.+++.++..++++++++||+++|||+....      ....+..+.. ...+.+..+.  ..+.
T Consensus       141 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~  220 (347)
T PRK11908        141 PINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQK  220 (347)
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCcee
Confidence            11235568999999999999999888899999999999999975431      1223333333 3344443332  2568


Q ss_pred             cceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPD---AKGRYICSS-H-TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~i~~~~~~  278 (285)
                      ++|||++|+|++++.+++++.   .+++||+++ + .+|+.|+++.+.+.++.
T Consensus       221 r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~  273 (347)
T PRK11908        221 RAFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAE  273 (347)
T ss_pred             eccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcC
Confidence            899999999999999998753   356899876 3 69999999999987764

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=100.00  E-value=2.6e-37  Score=266.96  Aligned_cols=256  Identities=18%  Similarity=0.178  Sum_probs=191.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      ||+|||||||||||+++++.|+++|++++++.++..    . ......+.... ...++.++.+|++|.+.+.+++++  
T Consensus         1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~----~-~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   74 (355)
T PRK10217          1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLT----Y-AGNLMSLAPVA-QSERFAFEKVDICDRAELARVFTEHQ   74 (355)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCc----c-ccchhhhhhcc-cCCceEEEECCCcChHHHHHHHhhcC
Confidence            368999999999999999999999987665443320    0 01111111111 123678889999999999999984  


Q ss_pred             CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhc--------CCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKS--------GTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                      +|+|||+||.....  ..++ ..++++|+.++.++++++++.        ..+++||++||.++|+.......+++|+++
T Consensus        75 ~D~Vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~  153 (355)
T PRK10217         75 PDCVMHLAAESHVDRSIDGP-AAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTP  153 (355)
T ss_pred             CCEEEECCcccCcchhhhCh-HHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCC
Confidence            89999999986542  2344 589999999999999999863        126799999999877544333446777765


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHH-HHHHhcCccccc--ccc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSS-LALILGNREEYG--FLL  229 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~  229 (285)
                      .         .|.+.|+.||.++|.+++.++++++++++++||+++|||+...  ...+..+ .....+....+.  ++.
T Consensus       154 ~---------~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~  222 (355)
T PRK10217        154 Y---------APSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQ  222 (355)
T ss_pred             C---------CCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCc--ccHHHHHHHHHhcCCCceEeCCCCe
Confidence            3         3567899999999999999988889999999999999998632  1233333 333444443332  366


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+|+++..+++....+++||+++ +.+|+.|+++.+++.+++
T Consensus       223 ~~~~i~v~D~a~a~~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  272 (355)
T PRK10217        223 IRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEE  272 (355)
T ss_pred             eeCcCcHHHHHHHHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcc
Confidence            8999999999999999998765567899765 689999999999998764

>PLN02572 UDP-sulfoquinovose synthase

Probab=100.00  E-value=6.8e-37  Score=269.43  Aligned_cols=268  Identities=13%  Similarity=0.133  Sum_probs=188.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcccc---Cc---------cchhhhhcCCCCCCCEEEEecCCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR---NS---------KDLSFLKNLPGASERLRIFHADLS   71 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~---------~~~~~~~~~~~~~~~~~~~~~Dl~   71 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|........   ..         +....+...  ...+++++.+|++
T Consensus        46 ~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~~v~~Dl~  123 (442)
T PLN02572         46 KKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEV--SGKEIELYVGDIC  123 (442)
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHh--hCCcceEEECCCC
Confidence            568999999999999999999999999999987532100000   00         000000011  1236889999999


Q ss_pred             ChhhHHHHhcC--CCEEEEecccCCCC--CCCh--HHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCC
Q 023244           72 HPDGFDAAIAG--CTGVLHVATPVDFE--DKEP--EEVITQRAINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        72 d~~~~~~~~~~--~d~vih~a~~~~~~--~~~~--~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~  144 (285)
                      |.+.+.+++++  +|+|||+|+.....  ..++  ....+++|+.++.+++++|++.+ ++ +||++||..+|+...   
T Consensus       124 d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g-v~~~~V~~SS~~vYG~~~---  199 (442)
T PLN02572        124 DFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA-PDCHLVKLGTMGEYGTPN---  199 (442)
T ss_pred             CHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC-CCccEEEEecceecCCCC---
Confidence            99999999984  89999999874431  1222  23667899999999999999988 65 899999999876431   


Q ss_pred             cccccCCCC-----chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC------------
Q 023244          145 DMMDETFWS-----DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF------------  207 (285)
Q Consensus       145 ~~~~e~~~~-----~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~------------  207 (285)
                      .+++|....     ..+....+..|.++|+.||.++|.+++.+++.+|++++++||++||||++....            
T Consensus       200 ~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~  279 (442)
T PLN02572        200 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD  279 (442)
T ss_pred             CCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence            122222100     000000012356789999999999999999888999999999999999854310            


Q ss_pred             ---CccHHHHH-HHHhcCccccc--cccCcceeeHHHHHHHHHHhhcCCCCC---ceEEEeccccCHHHHHHHHHhh---
Q 023244          208 ---AGSVRSSL-ALILGNREEYG--FLLNTSMVHVDDVARAHIFLLEYPDAK---GRYICSSHTLTIQEMAEFLSAK---  275 (285)
Q Consensus       208 ---~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~---~~~~~~~~~~s~~e~~~~i~~~---  275 (285)
                         ...+..+. ....+....+.  ....|+|+|++|+|++++.++++....   .+||++++.+|+.|+++.+.+.   
T Consensus       280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs~~~si~el~~~i~~~~~~  359 (442)
T PLN02572        280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFTEQFSVNELAKLVTKAGEK  359 (442)
T ss_pred             cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCCCceeHHHHHHHHHHHHHh
Confidence               11222222 33334443332  256789999999999999999865332   3688877889999999999998   


Q ss_pred             CC
Q 023244          276 YP  277 (285)
Q Consensus       276 ~~  277 (285)
                      +|
T Consensus       360 ~g  361 (442)
T PLN02572        360 LG  361 (442)
T ss_pred             hC
Confidence            66

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=100.00  E-value=2.1e-36  Score=260.46  Aligned_cols=254  Identities=19%  Similarity=0.159  Sum_probs=190.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +|+|||||||||||+++++.|+++|++|++++|+..     .  ......... ...++.++.+|++|.+.+.+++++  
T Consensus         4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~-----~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~   75 (349)
T TIGR02622         4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPP-----T--SPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEFK   75 (349)
T ss_pred             CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCc-----c--chhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhcC
Confidence            589999999999999999999999999999998762     1  111111111 123577889999999999999875  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|+|||+|+....  ...++ ...+++|+.++.++++++++.+.+++||++||..+|+.. ....+++|+++.       
T Consensus        76 ~d~vih~A~~~~~~~~~~~~-~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~-~~~~~~~e~~~~-------  146 (349)
T TIGR02622        76 PEIVFHLAAQPLVRKSYADP-LETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRND-EWVWGYRETDPL-------  146 (349)
T ss_pred             CCEEEECCcccccccchhCH-HHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCC-CCCCCCccCCCC-------
Confidence            6999999996543  23345 488999999999999999876546899999999876432 223356666543       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHc-------CCcEEEeccCceecCCCCCCCCccHHHHHHHH-hcCccccc-cccCc
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEH-------GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-LGNREEYG-FLLNT  231 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~-------~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~  231 (285)
                        .|.++|+.||.++|.+++.+++.+       +++++++||+++|||+.... ...+..+.... .+....+. ....+
T Consensus       147 --~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~~~~~~~~~~~~g~~~~~~~g~~~r  223 (349)
T TIGR02622       147 --GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAE-DRLIPDVIRAFSSNKIVIIRNPDATR  223 (349)
T ss_pred             --CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchh-hhhhHHHHHHHhcCCCeEECCCCccc
Confidence              356789999999999999887654       89999999999999975321 22334444433 34333333 36789


Q ss_pred             ceeeHHHHHHHHHHhhcCC-----CCCceEEEec---cccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYP-----DAKGRYICSS---HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~-----~~~~~~~~~~---~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|+|++++.+++..     ..++.||+++   +..++.++++.+.+.++.
T Consensus       224 d~i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~  278 (349)
T TIGR02622       224 PWQHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG  278 (349)
T ss_pred             ceeeHHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence            9999999999999887642     2246899874   589999999999987653

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=100.00  E-value=7.4e-36  Score=258.17  Aligned_cols=253  Identities=19%  Similarity=0.147  Sum_probs=188.5

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ..+|+|||||||||||++|++.|+++||+|++++|...        .  .....   ....+++.+|++|.+.+..++++
T Consensus        19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~--------~--~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~   85 (370)
T PLN02695         19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKN--------E--HMSED---MFCHEFHLVDLRVMENCLKVTKG   85 (370)
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccc--------c--ccccc---cccceEEECCCCCHHHHHHHHhC
Confidence            45789999999999999999999999999999998651        0  00010   11356788999999999988889


Q ss_pred             CCEEEEecccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC--CcccccCCCCchhh
Q 023244           83 CTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD--VDMMDETFWSDVDY  157 (285)
Q Consensus        83 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~e~~~~~~~~  157 (285)
                      +|+|||+|+....   ...++ ...+..|+.++.+++++|++.+ +++|||+||..+|+.....  ..++.|++..    
T Consensus        86 ~D~Vih~Aa~~~~~~~~~~~~-~~~~~~N~~~t~nll~aa~~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~----  159 (370)
T PLN02695         86 VDHVFNLAADMGGMGFIQSNH-SVIMYNNTMISFNMLEAARING-VKRFFYASSACIYPEFKQLETNVSLKESDAW----  159 (370)
T ss_pred             CCEEEEcccccCCccccccCc-hhhHHHHHHHHHHHHHHHHHhC-CCEEEEeCchhhcCCccccCcCCCcCcccCC----
Confidence            9999999987542   12233 3567889999999999999988 8999999999887543211  1234454311    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC--CccHHHHHHH-Hhc-Cccccc--cccCc
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLAL-ILG-NREEYG--FLLNT  231 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~~~~-~~~-~~~~~~--~~~~~  231 (285)
                         +..|.++|+.+|.++|.++..+++.++++++++||+++|||+.....  ......+... ... ....+.  .+..+
T Consensus       160 ---p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r  236 (370)
T PLN02695        160 ---PAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTR  236 (370)
T ss_pred             ---CCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEE
Confidence               12356789999999999999988888999999999999999753221  1122233322 222 233232  25688


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|++++++.++++. ..+.||+++ +.+|++|+++.+.+..|.
T Consensus       237 ~~i~v~D~a~ai~~~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~  283 (370)
T PLN02695        237 SFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEIALSFENK  283 (370)
T ss_pred             eEEeHHHHHHHHHHHHhcc-CCCceEecCCCceeHHHHHHHHHHHhCC
Confidence            9999999999999988764 456788765 689999999999988774

>PLN02206 UDP-glucuronate decarboxylase

Probab=100.00  E-value=7.4e-36  Score=262.21  Aligned_cols=252  Identities=20%  Similarity=0.223  Sum_probs=186.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +.|+|||||||||||++|+++|+++|++|++++|...       ......... ....+++++.+|+.++.     +.++
T Consensus       118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~-------~~~~~~~~~-~~~~~~~~i~~D~~~~~-----l~~~  184 (442)
T PLN02206        118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFT-------GRKENVMHH-FSNPNFELIRHDVVEPI-----LLEV  184 (442)
T ss_pred             CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCc-------cchhhhhhh-ccCCceEEEECCccChh-----hcCC
Confidence            4589999999999999999999999999999987541       011111100 11236788899987753     4579


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++ ..++++|+.++.+|+++|++.+ + +|||+||..+|+..  ...+.+|+.+...++    
T Consensus       185 D~ViHlAa~~~~~~~~~~p-~~~~~~Nv~gt~nLleaa~~~g-~-r~V~~SS~~VYg~~--~~~p~~E~~~~~~~P----  255 (442)
T PLN02206        185 DQIYHLACPASPVHYKFNP-VKTIKTNVVGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP--LQHPQVETYWGNVNP----  255 (442)
T ss_pred             CEEEEeeeecchhhhhcCH-HHHHHHHHHHHHHHHHHHHHhC-C-EEEEECChHHhCCC--CCCCCCccccccCCC----
Confidence            999999997653  22345 4889999999999999999988 4 89999999987543  234566665322111    


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCcccccc--ccCcceeeHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYGF--LLNTSMVHVDD  238 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~D  238 (285)
                      ..+.+.|+.+|.++|.++..+++.++++++++||+++|||+........+..+.. ...+....+..  +..++|+|++|
T Consensus       256 ~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~D  335 (442)
T PLN02206        256 IGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSD  335 (442)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHH
Confidence            1235679999999999999998888999999999999999754322233443333 33444433332  45789999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|++++.++++. ..+.||++ ++.+|+.|+++.+.+.++.
T Consensus       336 va~ai~~a~e~~-~~g~yNIgs~~~~sl~Elae~i~~~~g~  375 (442)
T PLN02206        336 LVEGLMRLMEGE-HVGPFNLGNPGEFTMLELAKVVQETIDP  375 (442)
T ss_pred             HHHHHHHHHhcC-CCceEEEcCCCceeHHHHHHHHHHHhCC
Confidence            999999999765 45689876 4789999999999998864

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=6e-36  Score=262.34  Aligned_cols=252  Identities=21%  Similarity=0.258  Sum_probs=187.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +.|+|||||||||||++|+++|+++|++|++++|...       .......... ...+++++.+|+.+..     +.++
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~-------~~~~~~~~~~-~~~~~~~~~~Di~~~~-----~~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFT-------GRKENLVHLF-GNPRFELIRHDVVEPI-----LLEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCC-------ccHhHhhhhc-cCCceEEEECcccccc-----ccCC
Confidence            3479999999999999999999999999999998541       0111111110 1236788899987653     4579


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++ ..++++|+.++.+|+++|++.+ . +||++||.++|+..  ...+++|+.+...++    
T Consensus       186 D~ViHlAa~~~~~~~~~~p-~~~~~~Nv~gT~nLleaa~~~g-~-r~V~~SS~~VYg~~--~~~p~~E~~~~~~~p----  256 (436)
T PLN02166        186 DQIYHLACPASPVHYKYNP-VKTIKTNVMGTLNMLGLAKRVG-A-RFLLTSTSEVYGDP--LEHPQKETYWGNVNP----  256 (436)
T ss_pred             CEEEECceeccchhhccCH-HHHHHHHHHHHHHHHHHHHHhC-C-EEEEECcHHHhCCC--CCCCCCccccccCCC----
Confidence            999999997653  22345 4889999999999999999988 4 89999999987543  234566764322111    


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCcccccc--ccCcceeeHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYGF--LLNTSMVHVDD  238 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~D  238 (285)
                      ..+.+.|+.+|.++|.+++.+++.++++++++||+++|||++.......+..+.. ...+....+..  +..++|+|++|
T Consensus       257 ~~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~D  336 (436)
T PLN02166        257 IGERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSD  336 (436)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHH
Confidence            1245679999999999999998888999999999999999865332334444433 33344433322  45799999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+++..+++.. ..++||++ ++.+|+.|+++.+.+.++.
T Consensus       337 va~ai~~~~~~~-~~giyNIgs~~~~Si~ela~~I~~~~g~  376 (436)
T PLN02166        337 LVDGLVALMEGE-HVGPFNLGNPGEFTMLELAEVVKETIDS  376 (436)
T ss_pred             HHHHHHHHHhcC-CCceEEeCCCCcEeHHHHHHHHHHHhCC
Confidence            999999999754 45789875 4689999999999998874

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=100.00  E-value=8.8e-36  Score=275.08  Aligned_cols=256  Identities=20%  Similarity=0.277  Sum_probs=192.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh-HHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~   81 (285)
                      .+|+|||||||||||++|+++|+++ |++|++++|.+        .....+..    ..+++++.+|++|... ++++++
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~--------~~~~~~~~----~~~~~~~~gDl~d~~~~l~~~l~  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGS--------DAISRFLG----HPRFHFVEGDISIHSEWIEYHIK  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCc--------hhhhhhcC----CCceEEEeccccCcHHHHHHHhc
Confidence            4689999999999999999999986 79999999976        11111111    2368899999998765 577788


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+||....  ...++. ..+++|+.++.+++++|++.+  ++|||+||..+|+..  ...+++|+++...  ..
T Consensus       382 ~~D~ViHlAa~~~~~~~~~~~~-~~~~~Nv~~t~~ll~a~~~~~--~~~V~~SS~~vyg~~--~~~~~~E~~~~~~--~~  454 (660)
T PRK08125        382 KCDVVLPLVAIATPIEYTRNPL-RVFELDFEENLKIIRYCVKYN--KRIIFPSTSEVYGMC--TDKYFDEDTSNLI--VG  454 (660)
T ss_pred             CCCEEEECccccCchhhccCHH-HHHHhhHHHHHHHHHHHHhcC--CeEEEEcchhhcCCC--CCCCcCccccccc--cC
Confidence            99999999997654  234453 788999999999999999987  799999999887543  2346777765311  11


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC------CCccHHHHHHH-HhcCccccc--cccC
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSLAL-ILGNREEYG--FLLN  230 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~------~~~~~~~~~~~-~~~~~~~~~--~~~~  230 (285)
                      +...+.+.|+.||.++|.+++.+++.++++++++||+++|||+....      ....+..+... ..+....+.  ....
T Consensus       455 p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~  534 (660)
T PRK08125        455 PINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQK  534 (660)
T ss_pred             CCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCcee
Confidence            11234568999999999999999888899999999999999975431      11223333333 334333332  2568


Q ss_pred             cceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPD---AKGRYICSS-H-TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~i~~~~~~  278 (285)
                      ++|+|++|+|++++.+++++.   .+++||+++ + .+|++|+++.+.+.+|.
T Consensus       535 rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~  587 (660)
T PRK08125        535 RCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEK  587 (660)
T ss_pred             eceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhcc
Confidence            999999999999999998753   245799765 3 69999999999998874

>PLN02686 cinnamoyl-CoA reductase

Probab=100.00  E-value=2.4e-35  Score=254.76  Aligned_cols=259  Identities=29%  Similarity=0.447  Sum_probs=190.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC------CCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG------ASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~Dl~d~~~~~   77 (285)
                      ++|+||||||+||||+++++.|+++|++|+++.|+.        +....+..+..      ...++.++.+|++|.+.+.
T Consensus        52 ~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~--------~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~  123 (367)
T PLN02686         52 EARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQ--------EDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLH  123 (367)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHH
Confidence            468999999999999999999999999999988875        22222221100      0125788999999999999


Q ss_pred             HHhcCCCEEEEecccCCCCCC-ChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccce--eeeccCCC--CcccccCC
Q 023244           78 AAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNA--AVFYNDKD--VDMMDETF  151 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~-~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~--~~~~~~~~--~~~~~e~~  151 (285)
                      ++++++|.|||+|+..+.... .......+.|+.++.++++++++. + +++|||+||..  +|+.....  ...++|+.
T Consensus       124 ~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~-v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~  202 (367)
T PLN02686        124 EAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTES-VRKCVFTSSLLACVWRQNYPHDLPPVIDEES  202 (367)
T ss_pred             HHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCC-ccEEEEeccHHHhcccccCCCCCCcccCCCC
Confidence            999999999999998654221 111255788999999999999986 5 99999999974  34321111  13467766


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT  231 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                      +...+.   +..+.++|+.||.++|.+++.+++.+|++++++||++||||+........+   .....+. ..+..++.+
T Consensus       203 ~~~~~~---~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~---~~~~~g~-~~~~g~g~~  275 (367)
T PLN02686        203 WSDESF---CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTAT---IAYLKGA-QEMLADGLL  275 (367)
T ss_pred             CCChhh---cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhH---HHHhcCC-CccCCCCCc
Confidence            543221   123456799999999999999988889999999999999997543222111   2223332 223235667


Q ss_pred             ceeeHHHHHHHHHHhhcCC---CCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYP---DAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|+|++++.+++..   ..+++|+++++.+++.|+++.+.+.+|.
T Consensus       276 ~~v~V~Dva~A~~~al~~~~~~~~~~~yi~~g~~~s~~e~~~~i~~~~g~  325 (367)
T PLN02686        276 ATADVERLAEAHVCVYEAMGNKTAFGRYICFDHVVSREDEAEELARQIGL  325 (367)
T ss_pred             CeEEHHHHHHHHHHHHhccCCCCCCCcEEEeCCCccHHHHHHHHHHHcCC
Confidence            8999999999999999852   3456787888899999999999999974

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=2.4e-35  Score=253.34  Aligned_cols=256  Identities=20%  Similarity=0.195  Sum_probs=191.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cC-CCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL-PGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      |+|||||||||||++|+++|+++|++|++++|++...   .......+. .. .....+++++.+|++|.+.+.+++++ 
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSF---NTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCccc---chhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC
Confidence            5899999999999999999999999999999976100   001111111 00 00123688999999999999999985 


Q ss_pred             -CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           83 -CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTV---KRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        83 -~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                       +|+|||+|+.....  ...+ ...+++|+.++.+++++|++.+ +   ++|||+||.++|+...  ..+++|+.+.   
T Consensus        78 ~~d~ViH~Aa~~~~~~~~~~~-~~~~~~n~~gt~~ll~a~~~~~-~~~~~~~v~~SS~~vyg~~~--~~~~~E~~~~---  150 (343)
T TIGR01472        78 KPTEIYNLAAQSHVKVSFEIP-EYTADVDGIGTLRLLEAVRTLG-LIKSVKFYQASTSELYGKVQ--EIPQNETTPF---  150 (343)
T ss_pred             CCCEEEECCcccccchhhhCh-HHHHHHHHHHHHHHHHHHHHhC-CCcCeeEEEeccHHhhCCCC--CCCCCCCCCC---
Confidence             69999999986542  2233 3777889999999999999877 4   3899999999875432  3356777653   


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-CCccHHHHHHH-HhcCcc-cc-c-cccCc
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLAL-ILGNRE-EY-G-FLLNT  231 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-~~~~~~~~~~~-~~~~~~-~~-~-~~~~~  231 (285)
                            .|.++|+.||.++|.+++.+++.+++++++.|+.++|||+.... ....+..+... ..+... .+ . .+..+
T Consensus       151 ------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  224 (343)
T TIGR01472       151 ------YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKR  224 (343)
T ss_pred             ------CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCcccc
Confidence                  35678999999999999999888899999999999999974332 22233333332 234322 22 2 25689


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|+|++++.+++++. .+.||++ ++.+|+.|+++.+.+.+|.
T Consensus       225 d~i~V~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~  271 (343)
T TIGR01472       225 DWGHAKDYVEAMWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGK  271 (343)
T ss_pred             CceeHHHHHHHHHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCC
Confidence            99999999999999998653 4688865 5789999999999998884

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=6e-35  Score=248.08  Aligned_cols=247  Identities=30%  Similarity=0.378  Sum_probs=194.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC-CE
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC-TG   85 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-d~   85 (285)
                      +|||||||||||++|+++|+++|++|++++|..        .......      ..+.++.+|++|.+...+.++.. |+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~d~   67 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLR--------DGLDPLL------SGVEFVVLDLTDRDLVDELAKGVPDA   67 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCC--------ccccccc------cccceeeecccchHHHHHHHhcCCCE
Confidence            599999999999999999999999999999976        1111111      36788999999998888888887 99


Q ss_pred             EEEecccCCCCCCC--hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCC-CCchhhhhhcC
Q 023244           86 VLHVATPVDFEDKE--PEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF-WSDVDYIRKLD  162 (285)
Q Consensus        86 vih~a~~~~~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~-~~~~~~~~~~~  162 (285)
                      |||+|+........  ....+++.|+.++.+++++|++.+ +++|||.||..+++.. ....+++|+. +.         
T Consensus        68 vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~-~~~~v~~ss~~~~~~~-~~~~~~~E~~~~~---------  136 (314)
T COG0451          68 VIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAG-VKRFVFASSVSVVYGD-PPPLPIDEDLGPP---------  136 (314)
T ss_pred             EEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCCCceECCC-CCCCCcccccCCC---------
Confidence            99999987763222  123689999999999999999977 9999998887766655 4444777773 32         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCc-cHHH-HHHHHhcCc-ccccc--ccCcceeeHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-SVRS-SLALILGNR-EEYGF--LLNTSMVHVD  237 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~-~~~~-~~~~~~~~~-~~~~~--~~~~~~i~~~  237 (285)
                      .|.++|+.+|.++|..+..+.+.++++++++||+.+|||+....... .... +.....+.+ ..+..  ...++|+|++
T Consensus       137 ~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  216 (314)
T COG0451         137 RPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVD  216 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHH
Confidence            33447999999999999999887899999999999999987765443 3322 222334443 23322  4457899999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEecc--ccCHHHHHHHHHhhCCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICSSH--TLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~i~~~~~~~  279 (285)
                      |++++++.+++++... .||++++  ..++.|+++.+.+.++..
T Consensus       217 D~a~~~~~~~~~~~~~-~~ni~~~~~~~~~~e~~~~~~~~~~~~  259 (314)
T COG0451         217 DVADALLLALENPDGG-VFNIGSGTAEITVRELAEAVAEAVGSK  259 (314)
T ss_pred             HHHHHHHHHHhCCCCc-EEEeCCCCCcEEHHHHHHHHHHHhCCC
Confidence            9999999999988766 8887764  799999999999988864

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=100.00  E-value=1.5e-34  Score=247.07  Aligned_cols=249  Identities=35%  Similarity=0.469  Sum_probs=192.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|+||||+||||+++++.|+++|++|++++|++        +....+.     ..+++++.+|++|.+++.++++++|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~D~~~~~~l~~~~~~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPT--------SDRRNLE-----GLDVEIVEGDLRDPASLRKAVAGCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecC--------ccccccc-----cCCceEEEeeCCCHHHHHHHHhCCCE
Confidence            4799999999999999999999999999999976        1111111     12688899999999999999999999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      |||+|+.......++ ...++.|+.++.++++++++.+ +++||++||..+|+.. ....+++|+.+...      ....
T Consensus        68 vi~~a~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~-~~~~~~~e~~~~~~------~~~~  138 (328)
T TIGR03466        68 LFHVAADYRLWAPDP-EEMYAANVEGTRNLLRAALEAG-VERVVYTSSVATLGVR-GDGTPADETTPSSL------DDMI  138 (328)
T ss_pred             EEEeceecccCCCCH-HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEechhhcCcC-CCCCCcCccCCCCc------cccc
Confidence            999998765443444 4889999999999999999988 8999999999877543 23346677765321      1123


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF  245 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  245 (285)
                      ..|+.+|.++|.+++.++.+++++++++||+.+|||+...... ....+.....+....+ .+..++|+|++|+|+++..
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~a~~~  216 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAY-VDTGLNLVHVDDVAEGHLL  216 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCcee-eCCCcceEEHHHHHHHHHH
Confidence            5799999999999999988789999999999999997543211 1112222222222222 2445789999999999999


Q ss_pred             hhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          246 LLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       246 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++++..+..|+++++.+|+.|+++.+.+.+|.
T Consensus       217 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~  249 (328)
T TIGR03466       217 ALERGRIGERYILGGENLTLKQILDKLAEITGR  249 (328)
T ss_pred             HHhCCCCCceEEecCCCcCHHHHHHHHHHHhCC
Confidence            998765555688888899999999999998885

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=100.00  E-value=1.1e-34  Score=250.40  Aligned_cols=254  Identities=20%  Similarity=0.194  Sum_probs=187.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      |+|||||||||||++|+++|+++|++ |+++++...      ......+..+. ...+++++.+|++|.+++.+++++  
T Consensus         1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   73 (352)
T PRK10084          1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTY------AGNLESLADVS-DSERYVFEHADICDRAELDRIFAQHQ   73 (352)
T ss_pred             CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCc------cchHHHHHhcc-cCCceEEEEecCCCHHHHHHHHHhcC
Confidence            47999999999999999999999876 555554320      01111111111 123678899999999999999874  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhc--------CCccEEEEeccceeeeccCCC--------C
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKS--------GTVKRVVYTSSNAAVFYNDKD--------V  144 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~~~~--------~  144 (285)
                      +|+|||+|+....  ....+ +.++++|+.++.+++++|++.        +.+++||++||.++|+.....        .
T Consensus        74 ~d~vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (352)
T PRK10084         74 PDAVMHLAAESHVDRSITGP-AAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEEL  152 (352)
T ss_pred             CCEEEECCcccCCcchhcCc-hhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccC
Confidence            8999999997653  22334 588999999999999999874        126799999999887543111        1


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHH-HHHHhcCcc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSS-LALILGNRE  223 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~  223 (285)
                      .+++|+++.         .|.+.|+.||.++|.+++.+++.++++++++||+.||||+...  ...+..+ .....+...
T Consensus       153 ~~~~E~~~~---------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~  221 (352)
T PRK10084        153 PLFTETTAY---------APSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPL  221 (352)
T ss_pred             CCccccCCC---------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCc--cchHHHHHHHHhcCCCe
Confidence            235565543         3567899999999999999988889999999999999997532  1233333 333334333


Q ss_pred             ccc--cccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          224 EYG--FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       224 ~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .+.  .+..++|+|++|+|+++..+++.+..++.||+++ +.+|+.|+++.+++.++.
T Consensus       222 ~~~~~g~~~~~~v~v~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~  279 (352)
T PRK10084        222 PIYGKGDQIRDWLYVEDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDE  279 (352)
T ss_pred             EEeCCCCeEEeeEEHHHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence            332  3668999999999999999998765567899765 688999999999988874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=100.00  E-value=9.5e-35  Score=269.46  Aligned_cols=256  Identities=20%  Similarity=0.252  Sum_probs=192.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-   80 (285)
                      ..|+|||||||||||++|++.|+++  +++|++++|...     . .....+... ....+++++.+|++|.+.+..++ 
T Consensus         5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~-----~-~~~~~l~~~-~~~~~v~~~~~Dl~d~~~~~~~~~   77 (668)
T PLN02260          5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDY-----C-SNLKNLNPS-KSSPNFKFVKGDIASADLVNYLLI   77 (668)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCc-----c-chhhhhhhc-ccCCCeEEEECCCCChHHHHHHHh
Confidence            3589999999999999999999987  688998887530     0 111111111 11247899999999998888766 


Q ss_pred             -cCCCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCC-cccccCCCCchh
Q 023244           81 -AGCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDV-DMMDETFWSDVD  156 (285)
Q Consensus        81 -~~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~-~~~~e~~~~~~~  156 (285)
                       .++|+|||+|+.....  ..++ ..++++|+.++.+|++++++.+.+++|||+||..+|+...... ...+|+++.   
T Consensus        78 ~~~~D~ViHlAa~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~---  153 (668)
T PLN02260         78 TEGIDTIMHFAAQTHVDNSFGNS-FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQL---  153 (668)
T ss_pred             hcCCCEEEECCCccCchhhhhCH-HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCC---
Confidence             4699999999987652  2334 4788999999999999999887689999999999875442211 122444432   


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCcccccc--ccCcce
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYGF--LLNTSM  233 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~  233 (285)
                            .|.++|+.+|.++|.++..+++.++++++++||++||||+....  ..+..+... ..+....+..  +..++|
T Consensus       154 ------~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~  225 (668)
T PLN02260        154 ------LPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE--KLIPKFILLAMQGKPLPIHGDGSNVRSY  225 (668)
T ss_pred             ------CCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc--cHHHHHHHHHhCCCCeEEecCCCceEee
Confidence                  34578999999999999999888899999999999999975432  233333333 3333333322  557899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|++|+|+++..+++....+++||+++ +.+|+.|+++.+++.+|.
T Consensus       226 ihV~Dva~a~~~~l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~  271 (668)
T PLN02260        226 LYCEDVAEAFEVVLHKGEVGHVYNIGTKKERRVIDVAKDICKLFGL  271 (668)
T ss_pred             EEHHHHHHHHHHHHhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCC
Confidence            999999999999998766678999765 689999999999999885

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=100.00  E-value=8.1e-35  Score=246.66  Aligned_cols=239  Identities=19%  Similarity=0.239  Sum_probs=172.8

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hh-HHHHhc--
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DG-FDAAIA--   81 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~-~~~~~~--   81 (285)
                      |||||||||||++|+++|+++|++++++.|+..       .... .         ..+..+|+.|.   ++ +..+++  
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~-------~~~~-~---------~~~~~~~~~d~~~~~~~~~~~~~~~   64 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK-------DGTK-F---------VNLVDLDIADYMDKEDFLAQIMAGD   64 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCC-------cchH-H---------HhhhhhhhhhhhhHHHHHHHHhccc
Confidence            899999999999999999999998777776541       0000 0         01223455443   33 233332  


Q ss_pred             ---CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           82 ---GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        82 ---~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                         ++|+|||+||..+....++ ...++.|+.++.+|+++|++.+ + +||++||..+|+..  ...+.+|+.+.     
T Consensus        65 ~~~~~d~Vih~A~~~~~~~~~~-~~~~~~n~~~t~~ll~~~~~~~-~-~~i~~SS~~vyg~~--~~~~~~E~~~~-----  134 (308)
T PRK11150         65 DFGDIEAIFHEGACSSTTEWDG-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TDDFIEEREYE-----  134 (308)
T ss_pred             ccCCccEEEECceecCCcCCCh-HHHHHHHHHHHHHHHHHHHHcC-C-cEEEEcchHHhCcC--CCCCCccCCCC-----
Confidence               5899999999755433344 3678999999999999999988 5 79999999987543  22345666542     


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHH-HhcCccc-ccc--ccCcc
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLAL-ILGNREE-YGF--LLNTS  232 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~-~~~~~~~-~~~--~~~~~  232 (285)
                          .|.++|+.+|.++|.+++.++...+++++++||+++|||+....  .......+... ..+.... +..  ...++
T Consensus       135 ----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~  210 (308)
T PRK11150        135 ----KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRD  210 (308)
T ss_pred             ----CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeee
Confidence                35578999999999999999877899999999999999976432  22223233332 3333222 222  34689


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++|+|++++.+++.. .+++||++ ++.+|+.|+++.+.+.++.
T Consensus       211 ~i~v~D~a~a~~~~~~~~-~~~~yni~~~~~~s~~el~~~i~~~~~~  256 (308)
T PRK11150        211 FVYVGDVAAVNLWFWENG-VSGIFNCGTGRAESFQAVADAVLAYHKK  256 (308)
T ss_pred             eeeHHHHHHHHHHHHhcC-CCCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence            999999999999998864 45789975 4679999999999998864

>PLN02240 UDP-glucose 4-epimerase

Probab=100.00  E-value=2.2e-34  Score=248.44  Aligned_cols=261  Identities=21%  Similarity=0.253  Sum_probs=191.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|+|+|||||||||++|+++|+++|++|++++|...    ........+.... ....++.++.+|++|.+.+..+
T Consensus         1 ~~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~   76 (352)
T PLN02240          1 MSLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDN----SSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKV   76 (352)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCc----chHHHHHHHHHhhcccCccceEEecCcCCHHHHHHH
Confidence            7777899999999999999999999999999999987541    0001111111111 1123688899999999999998


Q ss_pred             hc--CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           80 IA--GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        80 ~~--~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                      ++  ++|+|||+|+....  ...++ ...++.|+.++.++++++++.+ +++||++||..+|+..  ...+++|+++.  
T Consensus        77 ~~~~~~d~vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~vyg~~--~~~~~~E~~~~--  150 (352)
T PLN02240         77 FASTRFDAVIHFAGLKAVGESVAKP-LLYYDNNLVGTINLLEVMAKHG-CKKLVFSSSATVYGQP--EEVPCTEEFPL--  150 (352)
T ss_pred             HHhCCCCEEEEccccCCccccccCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCC--CCCCCCCCCCC--
Confidence            86  58999999997543  22344 4889999999999999999888 8999999998766432  34567887754  


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHH-cCCcEEEeccCceecCCCCCC-------CC-ccHHHHHHHHhcCcccc-
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK-------FA-GSVRSSLALILGNREEY-  225 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~i~~~i~Rp~~v~g~~~~~~-------~~-~~~~~~~~~~~~~~~~~-  225 (285)
                             .+.++|+.+|.++|.+++.++.. .+++++++|++++||++....       .. ..+..+.....+....+ 
T Consensus       151 -------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (352)
T PLN02240        151 -------SATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELT  223 (352)
T ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceE
Confidence                   34578999999999999988754 579999999999999754211       11 12233333333322111 


Q ss_pred             ---------ccccCcceeeHHHHHHHHHHhhcCC----CC-CceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          226 ---------GFLLNTSMVHVDDVARAHIFLLEYP----DA-KGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 ---------~~~~~~~~i~~~D~a~~~~~~~~~~----~~-~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                               .....++|+|++|+|++++.+++..    .. +++||++ ++.+|++|+++.+.+.++.
T Consensus       224 ~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~  291 (352)
T PLN02240        224 VFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGK  291 (352)
T ss_pred             EeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCC
Confidence                     1255789999999999998888642    22 3589865 5789999999999998874

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=100.00  E-value=3.8e-34  Score=245.74  Aligned_cols=257  Identities=18%  Similarity=0.185  Sum_probs=192.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|++...   .......+.. ......++.++.+|++|.+.+..+++.
T Consensus         5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNF---NTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccc---cccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999875100   0011111111 111123688999999999999998874


Q ss_pred             --CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCcc-----EEEEeccceeeeccCCCCcccccCCCC
Q 023244           83 --CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVK-----RVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        83 --~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                        +|+|||+|+..+..  ..++ ...+++|+.++.++++++++.+ ++     +||++||.++|+...   .+++|+++.
T Consensus        82 ~~~d~Vih~A~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~~~-~~~~~~~~~v~~Ss~~vyg~~~---~~~~E~~~~  156 (340)
T PLN02653         82 IKPDEVYNLAAQSHVAVSFEMP-DYTADVVATGALRLLEAVRLHG-QETGRQIKYYQAGSSEMYGSTP---PPQSETTPF  156 (340)
T ss_pred             cCCCEEEECCcccchhhhhhCh-hHHHHHHHHHHHHHHHHHHHhc-cccccceeEEEeccHHHhCCCC---CCCCCCCCC
Confidence              79999999986542  2344 4778999999999999999887 54     899999998775432   267777654


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-CCccHHHHHHHH-hcCccc-c-c-cc
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLALI-LGNREE-Y-G-FL  228 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-~~~~~~~~~~~~-~~~~~~-~-~-~~  228 (285)
                               .|.++|+.||.++|.+++.+++.++++++..|+.++|||+.... ....+..+...+ .+.... + . .+
T Consensus       157 ---------~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  227 (340)
T PLN02653        157 ---------HPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLD  227 (340)
T ss_pred             ---------CCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCc
Confidence                     35678999999999999999988899999999999999964332 222232222222 333322 2 2 25


Q ss_pred             cCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          229 LNTSMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      ..++|+|++|+|++++.++++.. .+.||++ ++.+|+.|+++.+.+.+|.
T Consensus       228 ~~rd~i~v~D~a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~  277 (340)
T PLN02653        228 ASRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGL  277 (340)
T ss_pred             ceecceeHHHHHHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCC
Confidence            68999999999999999998753 4678865 5789999999999998874

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=100.00  E-value=7.9e-35  Score=237.42  Aligned_cols=227  Identities=27%  Similarity=0.333  Sum_probs=180.9

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--CCE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CTG   85 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~   85 (285)
                      |||||||||||++++++|+++|++|+.+.|+.        .........    .++.++.+|+.|.+.++++++.  +|+
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~--------~~~~~~~~~----~~~~~~~~dl~~~~~~~~~~~~~~~d~   68 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSS--------NSESFEEKK----LNVEFVIGDLTDKEQLEKLLEKANIDV   68 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCS--------TGGHHHHHH----TTEEEEESETTSHHHHHHHHHHHTESE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccc--------ccccccccc----ceEEEEEeeccccccccccccccCceE
Confidence            79999999999999999999999999999877        222111111    1789999999999999999986  499


Q ss_pred             EEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           86 VLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        86 vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |||+|+....  ....+ ...++.|+.++.++++++++.+ +++||++||..+|+..  ...+++|+.+.         .
T Consensus        69 vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~sS~~~y~~~--~~~~~~e~~~~---------~  135 (236)
T PF01370_consen   69 VIHLAAFSSNPESFEDP-EEIIEANVQGTRNLLEAAREAG-VKRFIFLSSASVYGDP--DGEPIDEDSPI---------N  135 (236)
T ss_dssp             EEEEBSSSSHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT-TSEEEEEEEGGGGTSS--SSSSBETTSGC---------C
T ss_pred             EEEeecccccccccccc-cccccccccccccccccccccc-cccccccccccccccc--ccccccccccc---------c
Confidence            9999998632  12233 4889999999999999999999 7999999998876544  45567887764         3


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCC-CCCCCCccHHHHHHH-HhcCccccc--cccCcceeeHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF-ICPKFAGSVRSSLAL-ILGNREEYG--FLLNTSMVHVDDV  239 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~D~  239 (285)
                      +.++|+.+|..+|.+++.+.++++++++++||+.+|||. ........+..+... ..+.+..+.  .+..++|+|++|+
T Consensus       136 ~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~  215 (236)
T PF01370_consen  136 PLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDL  215 (236)
T ss_dssp             HSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHH
Confidence            457799999999999999998889999999999999998 222334455544444 445543333  3668999999999


Q ss_pred             HHHHHHhhcCCC-CCceEEEe
Q 023244          240 ARAHIFLLEYPD-AKGRYICS  259 (285)
Q Consensus       240 a~~~~~~~~~~~-~~~~~~~~  259 (285)
                      |++++.+++++. .+++||++
T Consensus       216 a~~~~~~~~~~~~~~~~yNig  236 (236)
T PF01370_consen  216 AEAIVAALENPKAAGGIYNIG  236 (236)
T ss_dssp             HHHHHHHHHHSCTTTEEEEES
T ss_pred             HHHHHHHHhCCCCCCCEEEeC
Confidence            999999999988 67789874

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=5.1e-35  Score=230.29  Aligned_cols=252  Identities=19%  Similarity=0.209  Sum_probs=199.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +.++|+||||.||||++||..|+.+||+|++++.-.        .........-....+++.+.-|+..+     ++..+
T Consensus        26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~f--------tg~k~n~~~~~~~~~fel~~hdv~~p-----l~~ev   92 (350)
T KOG1429|consen   26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYF--------TGRKENLEHWIGHPNFELIRHDVVEP-----LLKEV   92 (350)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEeccc--------ccchhhcchhccCcceeEEEeechhH-----HHHHh
Confidence            468999999999999999999999999999999754        11111111111234677777777655     77789


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |.|+|+|++.+.  ...++. +++.+|+.++.+.+-.|++.+  +||++.||+.+|+.  +...+..|+-|....+.   
T Consensus        93 D~IyhLAapasp~~y~~npv-ktIktN~igtln~lglakrv~--aR~l~aSTseVYgd--p~~hpq~e~ywg~vnpi---  164 (350)
T KOG1429|consen   93 DQIYHLAAPASPPHYKYNPV-KTIKTNVIGTLNMLGLAKRVG--ARFLLASTSEVYGD--PLVHPQVETYWGNVNPI---  164 (350)
T ss_pred             hhhhhhccCCCCcccccCcc-ceeeecchhhHHHHHHHHHhC--ceEEEeecccccCC--cccCCCccccccccCcC---
Confidence            999999998776  334564 899999999999999999998  89999999998766  35667777777655443   


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHH-hcCcccccc--ccCcceeeHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-LGNREEYGF--LLNTSMVHVDD  238 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~i~~~D  238 (285)
                       .++..|...|..+|.++.++.+..|+.+.|.|+.+.|||.++-.....+..|..+. .+.+.....  .+.|+|.|++|
T Consensus       165 -gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD  243 (350)
T KOG1429|consen  165 -GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSD  243 (350)
T ss_pred             -CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHH
Confidence             35667999999999999999999999999999999999988877777777776554 444433332  66899999999


Q ss_pred             HHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDAKGRYIC-SSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++++++.+++++... .+|+ +++.+|+.|+++++.+..+.
T Consensus       244 ~Vegll~Lm~s~~~~-pvNiGnp~e~Tm~elAemv~~~~~~  283 (350)
T KOG1429|consen  244 LVEGLLRLMESDYRG-PVNIGNPGEFTMLELAEMVKELIGP  283 (350)
T ss_pred             HHHHHHHHhcCCCcC-CcccCCccceeHHHHHHHHHHHcCC
Confidence            999999999987554 4665 55799999999999998854

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=100.00  E-value=1.1e-33  Score=240.70  Aligned_cols=252  Identities=20%  Similarity=0.194  Sum_probs=189.3

Q ss_pred             eEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +|+||||||+||++++++|++.|  ++|++++|...     . .....+.... ...++.++.+|++|++++.+++++  
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~-----~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~   73 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTY-----A-GNLENLADLE-DNPRYRFVKGDIGDRELVSRLFTEHQ   73 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCc-----c-hhhhhhhhhc-cCCCcEEEEcCCcCHHHHHHHHhhcC
Confidence            58999999999999999999887  78988876430     0 1111111111 123678899999999999999987  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|+|||+|+....  ...++ +.++++|+.++.++++++++.+...++|++||..+|+... ...+++|+++.       
T Consensus        74 ~d~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~-~~~~~~e~~~~-------  144 (317)
T TIGR01181        74 PDAVVHFAAESHVDRSISGP-AAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLE-KGDAFTETTPL-------  144 (317)
T ss_pred             CCEEEEcccccCchhhhhCH-HHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCC-CCCCcCCCCCC-------
Confidence            8999999997653  22334 4789999999999999999875224899999998775442 22256676653       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccc--cccCcceeeHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYG--FLLNTSMVHVD  237 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~  237 (285)
                        .+.+.|+.+|..+|.+++.++++.+++++++||+.+|||.....  ..+..+... ..+....+.  .+..++|+|++
T Consensus       145 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (317)
T TIGR01181       145 --APSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVE  220 (317)
T ss_pred             --CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence              34567999999999999999888899999999999999975432  233333333 333333322  24578999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|+++..++++...+++||++ ++.+++.|+++.+.+.+|.
T Consensus       221 D~a~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~i~~~~~~  262 (317)
T TIGR01181       221 DHCRAIYLVLEKGRVGETYNIGGGNERTNLEVVETILELLGK  262 (317)
T ss_pred             HHHHHHHHHHcCCCCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence            9999999999876666789875 4689999999999999885

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=100.00  E-value=7.8e-34  Score=241.67  Aligned_cols=233  Identities=20%  Similarity=0.222  Sum_probs=179.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+||||||+||||++++++|+++|  ++|++++|+.        .....+.... ...++.++.+|++|.+.+.++++
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~--------~~~~~~~~~~-~~~~~~~v~~Dl~d~~~l~~~~~   73 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDE--------LKQWEMQQKF-PAPCLRFFIGDVRDKERLTRALR   73 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCCh--------hHHHHHHHHh-CCCcEEEEEccCCCHHHHHHHHh
Confidence            36899999999999999999999886  7899998876        2221111111 11368899999999999999999


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+||....  ...++ ..++++|+.++.++++++++.+ +++||++||....                      
T Consensus        74 ~iD~Vih~Ag~~~~~~~~~~~-~~~~~~Nv~g~~~ll~aa~~~~-~~~iV~~SS~~~~----------------------  129 (324)
T TIGR03589        74 GVDYVVHAAALKQVPAAEYNP-FECIRTNINGAQNVIDAAIDNG-VKRVVALSTDKAA----------------------  129 (324)
T ss_pred             cCCEEEECcccCCCchhhcCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC----------------------
Confidence            99999999997543  23344 4889999999999999999988 8899999996421                      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHH---HcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc--ccc-ccccCcce
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR--EEY-GFLLNTSM  233 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~  233 (285)
                         .|.++|+.||.++|.+++.++.   ..|++++++|||++|||+.     ..+..+........  .++ .....++|
T Consensus       130 ---~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~-----~~i~~~~~~~~~~~~~~~i~~~~~~r~~  201 (324)
T TIGR03589       130 ---NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRG-----SVVPFFKSLKEEGVTELPITDPRMTRFW  201 (324)
T ss_pred             ---CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCC-----CcHHHHHHHHHhCCCCeeeCCCCceEee
Confidence               1346799999999999987543   4689999999999999863     23444444433322  222 23557899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCC
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  277 (285)
                      +|++|+|++++.++++...+.+|+.++..+++.|+++.+.+..+
T Consensus       202 i~v~D~a~a~~~al~~~~~~~~~~~~~~~~sv~el~~~i~~~~~  245 (324)
T TIGR03589       202 ITLEQGVNFVLKSLERMLGGEIFVPKIPSMKITDLAEAMAPECP  245 (324)
T ss_pred             EEHHHHHHHHHHHHhhCCCCCEEccCCCcEEHHHHHHHHHhhCC
Confidence            99999999999999875434467666678999999999998654

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=100.00  E-value=5.5e-34  Score=240.05  Aligned_cols=223  Identities=19%  Similarity=0.108  Sum_probs=170.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+||||||+||||++|+++|+++| +|++++|..                        ..+.+|++|.+.+.++++  ++
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~------------------------~~~~~Dl~d~~~~~~~~~~~~~   55 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS------------------------TDYCGDFSNPEGVAETVRKIRP   55 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc------------------------ccccCCCCCHHHHHHHHHhcCC
Confidence            479999999999999999999999 798888865                        123589999999999987  48


Q ss_pred             CEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+.....  ..++ +..+++|+.++.+|+++|++.+ . +|||+||..+|++.  ...+++|+++.        
T Consensus        56 D~Vih~Aa~~~~~~~~~~~-~~~~~~N~~~~~~l~~aa~~~g-~-~~v~~Ss~~Vy~~~--~~~p~~E~~~~--------  122 (299)
T PRK09987         56 DVIVNAAAHTAVDKAESEP-EFAQLLNATSVEAIAKAANEVG-A-WVVHYSTDYVFPGT--GDIPWQETDAT--------  122 (299)
T ss_pred             CEEEECCccCCcchhhcCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEccceEECCC--CCCCcCCCCCC--------
Confidence            9999999987653  3344 4778999999999999999998 4 89999999987543  23467887753        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHh-cCccccccc----cCcceeeH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNREEYGFL----LNTSMVHV  236 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~i~~  236 (285)
                       .|.++|+.||.++|.++..++    .+.+++||+++|||+..    .++..+..... +....+..+    ..+.+.+.
T Consensus       123 -~P~~~Yg~sK~~~E~~~~~~~----~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~  193 (299)
T PRK09987        123 -APLNVYGETKLAGEKALQEHC----AKHLIFRTSWVYAGKGN----NFAKTMLRLAKEREELSVINDQFGAPTGAELLA  193 (299)
T ss_pred             -CCCCHHHHHHHHHHHHHHHhC----CCEEEEecceecCCCCC----CHHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHH
Confidence             456789999999999987654    46799999999999643    23444444333 333222222    23355667


Q ss_pred             HHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhh
Q 023244          237 DDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAK  275 (285)
Q Consensus       237 ~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~  275 (285)
                      +|++.++..++..+...|+||++ ++.+|+.|+++.+.+.
T Consensus       194 d~~~~~~~~~~~~~~~~giyni~~~~~~s~~e~~~~i~~~  233 (299)
T PRK09987        194 DCTAHAIRVALNKPEVAGLYHLVASGTTTWHDYAALVFEE  233 (299)
T ss_pred             HHHHHHHHHhhccCCCCCeEEeeCCCCccHHHHHHHHHHH
Confidence            77888888777655455799875 5689999999999774

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=100.00  E-value=6.9e-34  Score=240.79  Aligned_cols=235  Identities=19%  Similarity=0.196  Sum_probs=178.3

Q ss_pred             EEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CCCEE
Q 023244            9 CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCTGV   86 (285)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v   86 (285)
                      ||||||||||++|++.|++.|++|+++.+..                           .+|++|.+.+.++++  ++|+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------------------~~Dl~~~~~l~~~~~~~~~d~V   53 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------------------ELDLTRQADVEAFFAKEKPTYV   53 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------------------cCCCCCHHHHHHHHhccCCCEE
Confidence            6999999999999999999999887664432                           389999999999887  47999


Q ss_pred             EEecccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           87 LHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        87 ih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      ||+|+..+.   ...++ ..+++.|+.++.+|+++|++.+ +++||++||..+|+..  ...+++|+++...    +..+
T Consensus        54 ih~A~~~~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~-~~~~i~~SS~~vyg~~--~~~~~~E~~~~~~----~~~p  125 (306)
T PLN02725         54 ILAAAKVGGIHANMTYP-ADFIRENLQIQTNVIDAAYRHG-VKKLLFLGSSCIYPKF--APQPIPETALLTG----PPEP  125 (306)
T ss_pred             EEeeeeecccchhhhCc-HHHHHHHhHHHHHHHHHHHHcC-CCeEEEeCceeecCCC--CCCCCCHHHhccC----CCCC
Confidence            999998543   22344 3789999999999999999988 8999999999876543  3456777764210    1112


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHH----HHHHH-HhcCcccc-c--cccCcce
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVR----SSLAL-ILGNREEY-G--FLLNTSM  233 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~----~~~~~-~~~~~~~~-~--~~~~~~~  233 (285)
                      ....|+.||.++|.+++.+++.++++++++||+.+|||+....  ....+.    .+... ..+.+..+ .  ....++|
T Consensus       126 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~  205 (306)
T PLN02725        126 TNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREF  205 (306)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecc
Confidence            2235999999999999998888899999999999999975321  112222    22222 22333222 1  2557899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|++|++++++.+++.....+.||++ +..+|+.|+++.+.+.++.
T Consensus       206 i~v~Dv~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~  251 (306)
T PLN02725        206 LHVDDLADAVVFLMRRYSGAEHVNVGSGDEVTIKELAELVKEVVGF  251 (306)
T ss_pred             ccHHHHHHHHHHHHhccccCcceEeCCCCcccHHHHHHHHHHHhCC
Confidence            99999999999999876555678876 4689999999999998874

>PLN02996 fatty acyl-CoA reductase

Probab=100.00  E-value=2.6e-33  Score=249.16  Aligned_cols=266  Identities=20%  Similarity=0.270  Sum_probs=186.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhh--------------cCCC-----CCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLK--------------NLPG-----ASE   61 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~--------------~~~~-----~~~   61 (285)
                      .+|+|||||||||||++|++.|+..+.   +|+++.|..     ........+.              ..+.     ...
T Consensus        10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~-----~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996         10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAS-----DAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCC-----CCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            468999999999999999999987643   689999976     2111111111              0110     025


Q ss_pred             CEEEEecCCCC-------hhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           62 RLRIFHADLSH-------PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        62 ~~~~~~~Dl~d-------~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      +++++.+|+++       .+.++++++++|+|||+||..+.. .++ +..+++|+.++.+++++|++.+.+++|||+||.
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~~-~~~-~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~  162 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNFD-ERY-DVALGINTLGALNVLNFAKKCVKVKMLLHVSTA  162 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHhCCCEEEECccccCCc-CCH-HHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeee
Confidence            89999999984       445677888999999999988763 344 589999999999999999987448999999999


Q ss_pred             eeeeccCCCCcccccCCCC-----------ch---------------------hhh---------h--hcCCCCchhHhh
Q 023244          135 AAVFYNDKDVDMMDETFWS-----------DV---------------------DYI---------R--KLDSWGKSYAIS  171 (285)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~-----------~~---------------------~~~---------~--~~~~~~~~Y~~s  171 (285)
                      .+|+....   .+.|....           +.                     ...         .  ....+.+.|+.|
T Consensus       163 ~vyG~~~~---~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~T  239 (491)
T PLN02996        163 YVCGEKSG---LILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFT  239 (491)
T ss_pred             EEecCCCc---eeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhh
Confidence            98765321   11111111           00                     000         0  023355789999


Q ss_pred             HHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHH------HH-HHHHhcCccccc--cccCcceeeHHHHHHH
Q 023244          172 KTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR------SS-LALILGNREEYG--FLLNTSMVHVDDVARA  242 (285)
Q Consensus       172 K~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~------~~-~~~~~~~~~~~~--~~~~~~~i~~~D~a~~  242 (285)
                      |+++|.++.+++  .+++++++||++|+||...+ .+.++.      .+ .....+....+.  ++..+|++|++|+|++
T Consensus       240 K~~aE~lv~~~~--~~lpv~i~RP~~V~G~~~~p-~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a  316 (491)
T PLN02996        240 KAMGEMLLGNFK--ENLPLVIIRPTMITSTYKEP-FPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNA  316 (491)
T ss_pred             HHHHHHHHHHhc--CCCCEEEECCCEeccCCcCC-CCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHH
Confidence            999999998865  38999999999999997654 222221      11 112223322232  2568999999999999


Q ss_pred             HHHhhcCC----CCCceEEEe-c--cccCHHHHHHHHHhhCCCCCCC
Q 023244          243 HIFLLEYP----DAKGRYICS-S--HTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       243 ~~~~~~~~----~~~~~~~~~-~--~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      ++.++...    ....+||++ +  .++|+.++++.+.+.++..|..
T Consensus       317 ~l~a~~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~~  363 (491)
T PLN02996        317 MIVAMAAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPWI  363 (491)
T ss_pred             HHHHHHHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCCc
Confidence            99998753    123479875 4  4799999999999988776653

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=100.00  E-value=5e-33  Score=238.74  Aligned_cols=255  Identities=18%  Similarity=0.208  Sum_probs=186.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+|||||||||||++|++.|+++|++|++++|...    ........+...  ...++.++.+|++|.+.+..+++  ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~~~   74 (338)
T PRK10675          1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCN----SKRSVLPVIERL--GGKHPTFVEGDIRNEALLTEILHDHAI   74 (338)
T ss_pred             CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCC----chHhHHHHHHHh--cCCCceEEEccCCCHHHHHHHHhcCCC
Confidence            47999999999999999999999999999987541    000111111111  12356788999999999998886  58


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ....+ ...+++|+.++.++++++++.+ +++||++||..+|+..  ...+++|+++.        
T Consensus        75 d~vvh~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~yg~~--~~~~~~E~~~~--------  142 (338)
T PRK10675         75 DTVIHFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAMRAAN-VKNLIFSSSATVYGDQ--PKIPYVESFPT--------  142 (338)
T ss_pred             CEEEECCccccccchhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhhCCC--CCCccccccCC--------
Confidence            999999987653  22233 4789999999999999999988 8999999999876432  33567777753        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCC--------CccHHHHHHHHhcCcccc-------
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKF--------AGSVRSSLALILGNREEY-------  225 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~--------~~~~~~~~~~~~~~~~~~-------  225 (285)
                      ..|.+.|+.+|.++|.+++.+++.. +++++++|++++|||......        ...+..+.....+....+       
T Consensus       143 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (338)
T PRK10675        143 GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcC
Confidence            1345789999999999999987654 899999999999997532111        112233333333322111       


Q ss_pred             ---ccccCcceeeHHHHHHHHHHhhcCC--CC-CceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          226 ---GFLLNTSMVHVDDVARAHIFLLEYP--DA-KGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 ---~~~~~~~~i~~~D~a~~~~~~~~~~--~~-~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                         ...+.++|+|++|+|++++.+++..  .. +++||++ ++.+|+.|+++.+.+.+|.
T Consensus       223 ~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  282 (338)
T PRK10675        223 PTEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGK  282 (338)
T ss_pred             CCCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCC
Confidence               1245689999999999999998752  22 3579876 5689999999999998875

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=100.00  E-value=1.2e-32  Score=231.22  Aligned_cols=224  Identities=21%  Similarity=0.175  Sum_probs=176.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--CC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d   84 (285)
                      +|||||||||||++++++|+++|++|++++|+.                            +|+.|.+.+..++++  +|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~----------------------------~d~~~~~~~~~~~~~~~~d   52 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ----------------------------LDLTDPEALERLLRAIRPD   52 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc----------------------------cCCCCHHHHHHHHHhCCCC
Confidence            589999999999999999999999999998853                            799999999999986  49


Q ss_pred             EEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           85 GVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        85 ~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|||+|+.....  ...+ ...+++|+.++.++++++++.+ . +||++||.++|+..  ...+++|+++.         
T Consensus        53 ~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~Ss~~vy~~~--~~~~~~E~~~~---------  118 (287)
T TIGR01214        53 AVVNTAAYTDVDGAESDP-EKAFAVNALAPQNLARAAARHG-A-RLVHISTDYVFDGE--GKRPYREDDAT---------  118 (287)
T ss_pred             EEEECCccccccccccCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeeeeecCC--CCCCCCCCCCC---------
Confidence            999999976542  2233 4788999999999999999887 4 89999999877542  34567777653         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHh-cCccccccccCcceeeHHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNREEYGFLLNTSMVHVDDVAR  241 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a~  241 (285)
                      .+.+.|+.+|..+|.+++.+    +++++++||+.+|||+...   .+...+..... +.......+..++|+|++|+|+
T Consensus       119 ~~~~~Y~~~K~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~  191 (287)
T TIGR01214       119 NPLNVYGQSKLAGEQAIRAA----GPNALIVRTSWLYGGGGGR---NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLAR  191 (287)
T ss_pred             CCcchhhHHHHHHHHHHHHh----CCCeEEEEeeecccCCCCC---CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHH
Confidence            34568999999999988754    6899999999999997422   22332333222 2223333356789999999999


Q ss_pred             HHHHhhcCC-CCCceEEEe-ccccCHHHHHHHHHhhCCCC
Q 023244          242 AHIFLLEYP-DAKGRYICS-SHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       242 ~~~~~~~~~-~~~~~~~~~-~~~~s~~e~~~~i~~~~~~~  279 (285)
                      ++..+++.+ ..+++||++ ++.+|+.|+++.+.+.+|..
T Consensus       192 a~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~  231 (287)
T TIGR01214       192 VIAALLQRLARARGVYHLANSGQCSWYEFAQAIFEEAGAD  231 (287)
T ss_pred             HHHHHHhhccCCCCeEEEECCCCcCHHHHHHHHHHHhCcc
Confidence            999999876 356789865 57899999999999998853

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.8e-33  Score=221.61  Aligned_cols=253  Identities=23%  Similarity=0.265  Sum_probs=196.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++++||||.||||++.+..+...  .++.+.++.=..     ... ...+++. ...++.+++.+|+.+...+..++. 
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~-----~s~-~~~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~   78 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDY-----CSN-LKNLEPV-RNSPNYKFVEGDIADADLVLYLFET   78 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccc-----ccc-cchhhhh-ccCCCceEeeccccchHHHHhhhcc
Confidence            478999999999999999999875  455555543210     001 2222222 235689999999999998888886 


Q ss_pred             -CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                       .+|.|||+|+..+.  +..++. .+.+.|+.++..|+++++..|++++|||+||..||+.+... ....|.+.+     
T Consensus        79 ~~id~vihfaa~t~vd~s~~~~~-~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~-~~~~E~s~~-----  151 (331)
T KOG0747|consen   79 EEIDTVIHFAAQTHVDRSFGDSF-EFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDED-AVVGEASLL-----  151 (331)
T ss_pred             CchhhhhhhHhhhhhhhhcCchH-HHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccc-ccccccccC-----
Confidence             48999999999886  344555 88899999999999999999889999999999998777432 222255543     


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCcccccc--ccCcceee
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYGF--LLNTSMVH  235 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~  235 (285)
                          .|.++|+++|+++|.+++++.+.++++++++|.++||||++..-  ..++.|.. +..+...++..  ...++|+|
T Consensus       152 ----nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~--klipkFi~l~~~~~~~~i~g~g~~~rs~l~  225 (331)
T KOG0747|consen  152 ----NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE--KLIPKFIKLAMRGKEYPIHGDGLQTRSYLY  225 (331)
T ss_pred             ----CCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChH--HHhHHHHHHHHhCCCcceecCcccceeeEe
Confidence                46789999999999999999999999999999999999987652  23333333 44455556665  34789999


Q ss_pred             HHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCC
Q 023244          236 VDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       236 ~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~  277 (285)
                      ++|+++++..+++++..+.+||++. .+.+..|+++.+.+.+.
T Consensus       226 veD~~ea~~~v~~Kg~~geIYNIgtd~e~~~~~l~k~i~eli~  268 (331)
T KOG0747|consen  226 VEDVSEAFKAVLEKGELGEIYNIGTDDEMRVIDLAKDICELFE  268 (331)
T ss_pred             HHHHHHHHHHHHhcCCccceeeccCcchhhHHHHHHHHHHHHH
Confidence            9999999999999977788999654 68999999888887554

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.3e-32  Score=220.76  Aligned_cols=220  Identities=23%  Similarity=0.184  Sum_probs=183.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--CC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d   84 (285)
                      +|||||++|++|++|++.|. .+++|++++|..                            .|++|++.+.+++++  +|
T Consensus         2 ~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------~Ditd~~~v~~~i~~~~PD   52 (281)
T COG1091           2 KILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------LDITDPDAVLEVIRETRPD   52 (281)
T ss_pred             cEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------ccccChHHHHHHHHhhCCC
Confidence            49999999999999999997 668999999976                            999999999999974  89


Q ss_pred             EEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|||+|++...  .+.++ +..+.+|..++.+++++|++.|  .++||+||..|+.+.  ...++.|+++.         
T Consensus        53 vVIn~AAyt~vD~aE~~~-e~A~~vNa~~~~~lA~aa~~~g--a~lVhiSTDyVFDG~--~~~~Y~E~D~~---------  118 (281)
T COG1091          53 VVINAAAYTAVDKAESEP-ELAFAVNATGAENLARAAAEVG--ARLVHISTDYVFDGE--KGGPYKETDTP---------  118 (281)
T ss_pred             EEEECccccccccccCCH-HHHHHhHHHHHHHHHHHHHHhC--CeEEEeecceEecCC--CCCCCCCCCCC---------
Confidence            99999999887  34444 5999999999999999999999  799999999987555  34678888874         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc-cccccCcceeeHHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE-YGFLLNTSMVHVDDVAR  241 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~D~a~  241 (285)
                      .|.+.||+||.+.|..+++.    +-+..|+|.+++||...    .+++..+.+........ ...++..+++++.|+|.
T Consensus       119 ~P~nvYG~sKl~GE~~v~~~----~~~~~I~Rtswv~g~~g----~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~  190 (281)
T COG1091         119 NPLNVYGRSKLAGEEAVRAA----GPRHLILRTSWVYGEYG----NNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLAD  190 (281)
T ss_pred             CChhhhhHHHHHHHHHHHHh----CCCEEEEEeeeeecCCC----CCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHH
Confidence            56788999999999999764    46789999999999753    33555555544444333 33378889999999999


Q ss_pred             HHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCC
Q 023244          242 AHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~  277 (285)
                      ++..++.....+++|++++ +..||.|+++.+.+..+
T Consensus       191 ~i~~ll~~~~~~~~yH~~~~g~~Swydfa~~I~~~~~  227 (281)
T COG1091         191 AILELLEKEKEGGVYHLVNSGECSWYEFAKAIFEEAG  227 (281)
T ss_pred             HHHHHHhccccCcEEEEeCCCcccHHHHHHHHHHHhC
Confidence            9999999887778998766 56799999999999886

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=100.00  E-value=4.9e-32  Score=230.26  Aligned_cols=242  Identities=19%  Similarity=0.184  Sum_probs=178.3

Q ss_pred             EEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc----C
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----G   82 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~   82 (285)
                      |||||||||||+++++.|+++|+ +|++++|..        ... .+...     ....+..|+++.+.++.+.+    +
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~--------~~~-~~~~~-----~~~~~~~d~~~~~~~~~~~~~~~~~   66 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR--------DGH-KFLNL-----ADLVIADYIDKEDFLDRLEKGAFGK   66 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC--------Cch-hhhhh-----hheeeeccCcchhHHHHHHhhccCC
Confidence            69999999999999999999997 788887754        111 11111     11345678888888877764    6


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|+|||+|+.......++ ...+++|+.++.+++++|++.+ + +||++||..+|+..   ..+++|+++.        .
T Consensus        67 ~D~vvh~A~~~~~~~~~~-~~~~~~n~~~~~~ll~~~~~~~-~-~~v~~SS~~vy~~~---~~~~~e~~~~--------~  132 (314)
T TIGR02197        67 IEAIFHQGACSDTTETDG-EYMMENNYQYSKRLLDWCAEKG-I-PFIYASSAATYGDG---EAGFREGREL--------E  132 (314)
T ss_pred             CCEEEECccccCccccch-HHHHHHHHHHHHHHHHHHHHhC-C-cEEEEccHHhcCCC---CCCcccccCc--------C
Confidence            999999999866544455 4788999999999999999988 5 89999999877543   2234554432        1


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHH--cCCcEEEeccCceecCCCCCC--CCccHHHHHHH-HhcCcccc--------cccc
Q 023244          163 SWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK--FAGSVRSSLAL-ILGNREEY--------GFLL  229 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~--~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~-~~~~~~~~--------~~~~  229 (285)
                      .|.+.|+.+|..+|.+++++...  .+++++++||+.+|||+....  ....+..+... ..+....+        ..+.
T Consensus       133 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (314)
T TIGR02197       133 RPLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQ  212 (314)
T ss_pred             CCCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCc
Confidence            35678999999999999875422  368999999999999975422  22333333332 33332222        1245


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+++++..++.. ...++||+++ +++|+.|+++.+.+.+|.
T Consensus       213 ~~~~i~v~D~a~~i~~~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~  261 (314)
T TIGR02197       213 LRDFVYVKDVVDVNLWLLEN-GVSGIFNLGTGRARSFNDLADAVFKALGK  261 (314)
T ss_pred             eeeeEEHHHHHHHHHHHHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCC
Confidence            68999999999999999987 4567899755 689999999999998875

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=6.3e-33  Score=223.53  Aligned_cols=258  Identities=20%  Similarity=0.245  Sum_probs=201.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      .++||||||.||||+|.+-+|+++|++|++++.=..    ...........+.....++.++++|++|.+.++++|+.  
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n----~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~   77 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNN----SYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVK   77 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccc----cchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcC
Confidence            478999999999999999999999999999986331    11233333444433457899999999999999999984  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|.|+|+|+....  +.++|. .++..|+.|+.+|++.+++.+ ++++|+.||+.+|+..  ...|++|+++..      
T Consensus        78 fd~V~Hfa~~~~vgeS~~~p~-~Y~~nNi~gtlnlLe~~~~~~-~~~~V~sssatvYG~p--~~ip~te~~~t~------  147 (343)
T KOG1371|consen   78 FDAVMHFAALAAVGESMENPL-SYYHNNIAGTLNLLEVMKAHN-VKALVFSSSATVYGLP--TKVPITEEDPTD------  147 (343)
T ss_pred             CceEEeehhhhccchhhhCch-hheehhhhhHHHHHHHHHHcC-CceEEEecceeeecCc--ceeeccCcCCCC------
Confidence            8999999998665  566775 999999999999999999999 9999999999987655  348899998753      


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-------CC-ccHHHHHH---------HHhcCcc
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------FA-GSVRSSLA---------LILGNRE  223 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-------~~-~~~~~~~~---------~~~~~~~  223 (285)
                        .|.++|+.+|.+.|.++.++...+++.++.+|..+++|...++.       .+ +.++...+         ...+.+.
T Consensus       148 --~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~  225 (343)
T KOG1371|consen  148 --QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDY  225 (343)
T ss_pred             --CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcc
Confidence              36788999999999999999988899999999999999322211       11 12211111         1112222


Q ss_pred             ccc-cccCcceeeHHHHHHHHHHhhcCCCC---CceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          224 EYG-FLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       224 ~~~-~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      ... .+..+++||+-|.|...+.++.+...   .++||++ +...++.+|+..++++.|.
T Consensus       226 ~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~  285 (343)
T KOG1371|consen  226 TTIDGTIVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGV  285 (343)
T ss_pred             cccCCCeeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcC
Confidence            222 26689999999999999999987654   2478865 5688999999999998885

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=100.00  E-value=5.7e-33  Score=231.76  Aligned_cols=223  Identities=24%  Similarity=0.223  Sum_probs=166.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   83 (285)
                      ||||||||+|+||++|.+.|.++|++|+++.|..                            .|++|.+.+.+++++  +
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~----------------------------~dl~d~~~~~~~~~~~~p   52 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRSD----------------------------LDLTDPEAVAKLLEAFKP   52 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC----------------------------S-TTSHHHHHHHHHHH--
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh----------------------------cCCCCHHHHHHHHHHhCC
Confidence            6899999999999999999999999999997754                            899999999999874  8


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+||..+.  .+.++ +..+++|+.++.+|+++|.+.+  .++||+||..||.+.  ...+++|+++.        
T Consensus        53 d~Vin~aa~~~~~~ce~~p-~~a~~iN~~~~~~la~~~~~~~--~~li~~STd~VFdG~--~~~~y~E~d~~--------  119 (286)
T PF04321_consen   53 DVVINCAAYTNVDACEKNP-EEAYAINVDATKNLAEACKERG--ARLIHISTDYVFDGD--KGGPYTEDDPP--------  119 (286)
T ss_dssp             SEEEE------HHHHHHSH-HHHHHHHTHHHHHHHHHHHHCT---EEEEEEEGGGS-SS--TSSSB-TTS----------
T ss_pred             CeEeccceeecHHhhhhCh-hhhHHHhhHHHHHHHHHHHHcC--CcEEEeeccEEEcCC--cccccccCCCC--------
Confidence            999999998765  33455 4899999999999999999998  699999999988655  45568888764        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc-cccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR-EEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~D~a  240 (285)
                       .|.+.||.+|.++|..+++..    -...|+|++++||+.    ...++..+........ .....+..+++++++|+|
T Consensus       120 -~P~~~YG~~K~~~E~~v~~~~----~~~~IlR~~~~~g~~----~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA  190 (286)
T PF04321_consen  120 -NPLNVYGRSKLEGEQAVRAAC----PNALILRTSWVYGPS----GRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLA  190 (286)
T ss_dssp             ---SSHHHHHHHHHHHHHHHH-----SSEEEEEE-SEESSS----SSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHhc----CCEEEEecceecccC----CCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHH
Confidence             467889999999999998743    379999999999993    2245555555544333 333347788999999999


Q ss_pred             HHHHHhhcCCCC----CceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPDA----KGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~~----~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++..++++...    .|+||++ ++.+|+.|+++.+++.++.
T Consensus       191 ~~i~~l~~~~~~~~~~~Giyh~~~~~~~S~~e~~~~i~~~~~~  233 (286)
T PF04321_consen  191 RVILELIEKNLSGASPWGIYHLSGPERVSRYEFAEAIAKILGL  233 (286)
T ss_dssp             HHHHHHHHHHHH-GGG-EEEE---BS-EEHHHHHHHHHHHHTH
T ss_pred             HHHHHHHHhcccccccceeEEEecCcccCHHHHHHHHHHHhCC
Confidence            999999987543    6899865 5789999999999998864

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.6e-31  Score=230.26  Aligned_cols=235  Identities=19%  Similarity=0.217  Sum_probs=194.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhh-cCCC--CCCCEEEEecCCCChhhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .+|+||||||+|-||+.+|+++++.+. ++++++|+.        .+.-.+. ++..  ...++.++-+|+.|.+.+.++
T Consensus       249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E--------~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~  320 (588)
T COG1086         249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDE--------YKLYLIDMELREKFPELKLRFYIGDVRDRDRVERA  320 (588)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCch--------HHHHHHHHHHHhhCCCcceEEEecccccHHHHHHH
Confidence            479999999999999999999999875 677888876        2221111 1111  145889999999999999999


Q ss_pred             hcC--CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           80 IAG--CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        80 ~~~--~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                      +++  +|+|+|+||..+.  -+.+|. +.+++|+.||.|++++|.+++ +++||.+||..++                  
T Consensus       321 ~~~~kvd~VfHAAA~KHVPl~E~nP~-Eai~tNV~GT~nv~~aa~~~~-V~~~V~iSTDKAV------------------  380 (588)
T COG1086         321 MEGHKVDIVFHAAALKHVPLVEYNPE-EAIKTNVLGTENVAEAAIKNG-VKKFVLISTDKAV------------------  380 (588)
T ss_pred             HhcCCCceEEEhhhhccCcchhcCHH-HHHHHhhHhHHHHHHHHHHhC-CCEEEEEecCccc------------------
Confidence            998  9999999999886  466775 999999999999999999999 9999999999875                  


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc-cc-cccC
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE-YG-FLLN  230 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~  230 (285)
                             .|.+.||.||+++|.++..+.++.   +-+++++|+|||.|..     ...++.|...+..+++. +. ++-.
T Consensus       381 -------~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-----GSViPlFk~QI~~GgplTvTdp~mt  448 (588)
T COG1086         381 -------NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-----GSVIPLFKKQIAEGGPLTVTDPDMT  448 (588)
T ss_pred             -------CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-----CCCHHHHHHHHHcCCCccccCCCce
Confidence                   345789999999999999988643   3899999999999973     34677777776655532 22 3667


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |=|+.+.|+++.++.+......+.+|... |+++++.|+++.|.+..|.
T Consensus       449 RyfMTI~EAv~LVlqA~a~~~gGeifvldMGepvkI~dLAk~mi~l~g~  497 (588)
T COG1086         449 RFFMTIPEAVQLVLQAGAIAKGGEIFVLDMGEPVKIIDLAKAMIELAGQ  497 (588)
T ss_pred             eEEEEHHHHHHHHHHHHhhcCCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence            88999999999999999988777789876 6899999999999998874

>CHL00194 ycf39 Ycf39; Provisional

Probab=100.00  E-value=1.4e-31  Score=227.51  Aligned_cols=220  Identities=18%  Similarity=0.217  Sum_probs=168.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|+|||||||+|++++++|+++||+|++++|+.        +....+..     .+++++.+|++|++.+.++++++|+
T Consensus         1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~--------~~~~~l~~-----~~v~~v~~Dl~d~~~l~~al~g~d~   67 (317)
T CHL00194          1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNL--------RKASFLKE-----WGAELVYGDLSLPETLPPSFKGVTA   67 (317)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCh--------HHhhhHhh-----cCCEEEECCCCCHHHHHHHHCCCCE
Confidence            4799999999999999999999999999999986        22222221     2688999999999999999999999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      |||+++...   .++ ..+.++|+.++.+++++|++.+ +++||++||..+..+                        +.
T Consensus        68 Vi~~~~~~~---~~~-~~~~~~~~~~~~~l~~aa~~~g-vkr~I~~Ss~~~~~~------------------------~~  118 (317)
T CHL00194         68 IIDASTSRP---SDL-YNAKQIDWDGKLALIEAAKAAK-IKRFIFFSILNAEQY------------------------PY  118 (317)
T ss_pred             EEECCCCCC---CCc-cchhhhhHHHHHHHHHHHHHcC-CCEEEEecccccccc------------------------CC
Confidence            999876432   223 2677889999999999999999 999999999643211                        12


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-cccCcceeeHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~~  244 (285)
                      .+|..+|..+|.+++    ..+++++++||+.+|+.....    .   ......+.+..+. ....++|||++|+|+++.
T Consensus       119 ~~~~~~K~~~e~~l~----~~~l~~tilRp~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  187 (317)
T CHL00194        119 IPLMKLKSDIEQKLK----KSGIPYTIFRLAGFFQGLISQ----Y---AIPILEKQPIWITNESTPISYIDTQDAAKFCL  187 (317)
T ss_pred             ChHHHHHHHHHHHHH----HcCCCeEEEeecHHhhhhhhh----h---hhhhccCCceEecCCCCccCccCHHHHHHHHH
Confidence            358999999998874    468999999999888642111    0   0011112222222 255679999999999999


Q ss_pred             HhhcCCCC-CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          245 FLLEYPDA-KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       245 ~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .+++++.. +++||+++ +.+|++|+++.+.+..|+
T Consensus       188 ~~l~~~~~~~~~~ni~g~~~~s~~el~~~~~~~~g~  223 (317)
T CHL00194        188 KSLSLPETKNKTFPLVGPKSWNSSEIISLCEQLSGQ  223 (317)
T ss_pred             HHhcCccccCcEEEecCCCccCHHHHHHHHHHHhCC
Confidence            99987654 45788755 689999999999999886

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=100.00  E-value=2.2e-32  Score=222.11  Aligned_cols=230  Identities=17%  Similarity=0.181  Sum_probs=169.9

Q ss_pred             EEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhh-cCC--CCCCCE----EEEecCCCChhhHHHH
Q 023244            8 VCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERL----RIFHADLSHPDGFDAA   79 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~-~~~--~~~~~~----~~~~~Dl~d~~~~~~~   79 (285)
                      ||||||+|.||+.||++|++.+ .++++++|+.        ...-.+. ++.  ....++    .++.+|++|.+.+.++
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E--------~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~   72 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDE--------NKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRI   72 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-H--------HHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHH
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCCh--------hHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHH
Confidence            7999999999999999999987 4799999986        2222222 120  012234    3458999999999999


Q ss_pred             hc--CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           80 IA--GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        80 ~~--~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                      ++  ++|+|+|+||+.+.  .+.+|. +.+++|+.||+|++++|.+++ +++||++||..++                  
T Consensus        73 ~~~~~pdiVfHaAA~KhVpl~E~~p~-eav~tNv~GT~nv~~aa~~~~-v~~~v~ISTDKAv------------------  132 (293)
T PF02719_consen   73 FEEYKPDIVFHAAALKHVPLMEDNPF-EAVKTNVLGTQNVAEAAIEHG-VERFVFISTDKAV------------------  132 (293)
T ss_dssp             TT--T-SEEEE------HHHHCCCHH-HHHHHHCHHHHHHHHHHHHTT--SEEEEEEECGCS------------------
T ss_pred             HhhcCCCEEEEChhcCCCChHHhCHH-HHHHHHHHHHHHHHHHHHHcC-CCEEEEccccccC------------------
Confidence            98  79999999999876  466775 999999999999999999999 9999999998874                  


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc-cc-cccC
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE-YG-FLLN  230 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~  230 (285)
                             .|.+.||+||+.+|.++..+....   +.+++++|+|||+|..     ...++.|...+..+++. +. ++-.
T Consensus       133 -------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTvT~p~mt  200 (293)
T PF02719_consen  133 -------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTVTDPDMT  200 (293)
T ss_dssp             -------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEECETT-E
T ss_pred             -------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCcceeCCCCcE
Confidence                   345889999999999999987654   5799999999999962     24677777776655533 32 3667


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  277 (285)
                      |=|+.++++++.++.+......+.+|+.. |+++++.|+++.+.+..|
T Consensus       201 Rffmti~EAv~Lvl~a~~~~~~geifvl~mg~~v~I~dlA~~~i~~~g  248 (293)
T PF02719_consen  201 RFFMTIEEAVQLVLQAAALAKGGEIFVLDMGEPVKILDLAEAMIELSG  248 (293)
T ss_dssp             EEEE-HHHHHHHHHHHHHH--TTEEEEE---TCEECCCHHHHHHHHTT
T ss_pred             EEEecHHHHHHHHHHHHhhCCCCcEEEecCCCCcCHHHHHHHHHhhcc
Confidence            88999999999999999877667788765 589999999999999887

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=100.00  E-value=1.2e-30  Score=222.89  Aligned_cols=251  Identities=23%  Similarity=0.258  Sum_probs=185.6

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d   84 (285)
                      +||||||||+||+.++++|+++|++|++++|...       .....+..... ..+++++.+|+++.+.+.++++  ++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~d   72 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSN-------GSPEALKRGER-ITRVTFVEGDLRDRELLDRLFEEHKID   72 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCc-------cchhhhhhhcc-ccceEEEECCCCCHHHHHHHHHhCCCc
Confidence            5899999999999999999999999998876431       11111111111 1157788999999999999886  589


Q ss_pred             EEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           85 GVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        85 ~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|||+|+.....  ..++ ...++.|+.++.++++++.+.+ ++++|++||..+|+..  ...+++|+++.         
T Consensus        73 ~vv~~ag~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~ss~~~~g~~--~~~~~~e~~~~---------  139 (328)
T TIGR01179        73 AVIHFAGLIAVGESVQDP-LKYYRNNVVNTLNLLEAMQQTG-VKKFIFSSSAAVYGEP--SSIPISEDSPL---------  139 (328)
T ss_pred             EEEECccccCcchhhcCc-hhhhhhhHHHHHHHHHHHHhcC-CCEEEEecchhhcCCC--CCCCccccCCC---------
Confidence            999999976442  2233 3778999999999999999888 8899999998866432  23357777653         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHH-cCCcEEEeccCceecCCCCCC-------CCccHHHHHHHHhcCcc--c-----cc-
Q 023244          163 SWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK-------FAGSVRSSLALILGNRE--E-----YG-  226 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~-~~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~--~-----~~-  226 (285)
                      .+.+.|+.+|.++|.+++.++++ .+++++++||+.+|||.....       ....+..+.....+...  .     ++ 
T Consensus       140 ~~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (328)
T TIGR01179       140 GPINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPT  219 (328)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccC
Confidence            24567999999999999998876 799999999999999864321       12223333333322111  1     11 


Q ss_pred             --cccCcceeeHHHHHHHHHHhhcCC---CCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          227 --FLLNTSMVHVDDVARAHIFLLEYP---DAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       227 --~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                        ....++|||++|+++++..++...   ..++.||++ ++.+|+.|+++.+++.+|.
T Consensus       220 ~~g~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~  277 (328)
T TIGR01179       220 PDGTCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGV  277 (328)
T ss_pred             CCCceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCC
Confidence              134679999999999999998752   234689875 5689999999999999885

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-30  Score=241.12  Aligned_cols=251  Identities=22%  Similarity=0.205  Sum_probs=179.2

Q ss_pred             CeEEEecCCchhHHHHHHHHH--HcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh------hhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLL--DHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP------DGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------~~~~   77 (285)
                      |+|||||||||||++|+++|+  +.|++|++++|+.     .. .....+... ....+++++.+|++|+      +.+.
T Consensus         1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~-----~~-~~~~~~~~~-~~~~~v~~~~~Dl~~~~~~~~~~~~~   73 (657)
T PRK07201          1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQ-----SL-SRLEALAAY-WGADRVVPLVGDLTEPGLGLSEADIA   73 (657)
T ss_pred             CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcc-----hH-HHHHHHHHh-cCCCcEEEEecccCCccCCcCHHHHH
Confidence            479999999999999999999  4789999999965     11 111111110 0114789999999984      3455


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                      ++ +++|+|||+|+..+... .. ....++|+.++.+++++|++.+ +++|||+||..+++...   ...+|+++...  
T Consensus        74 ~l-~~~D~Vih~Aa~~~~~~-~~-~~~~~~nv~gt~~ll~~a~~~~-~~~~v~~SS~~v~g~~~---~~~~e~~~~~~--  144 (657)
T PRK07201         74 EL-GDIDHVVHLAAIYDLTA-DE-EAQRAANVDGTRNVVELAERLQ-AATFHHVSSIAVAGDYE---GVFREDDFDEG--  144 (657)
T ss_pred             Hh-cCCCEEEECceeecCCC-CH-HHHHHHHhHHHHHHHHHHHhcC-CCeEEEEeccccccCcc---Cccccccchhh--
Confidence            55 78999999999876532 23 4788999999999999999988 89999999998875432   23444443110  


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCc-----cHHHHHHHHhcCcc--cc--ccc
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-----SVRSSLALILGNRE--EY--GFL  228 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~-----~~~~~~~~~~~~~~--~~--~~~  228 (285)
                          ..+.++|+.+|+++|.++.+   ..+++++++||++||||...+....     .+..........+.  ..  ...
T Consensus       145 ----~~~~~~Y~~sK~~~E~~~~~---~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        145 ----QGLPTPYHRTKFEAEKLVRE---ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             ----cCCCCchHHHHHHHHHHHHH---cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence                12346799999999999865   3589999999999999865432211     11111122211111  11  124


Q ss_pred             cCcceeeHHHHHHHHHHhhcCCCC-CceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          229 LNTSMVHVDDVARAHIFLLEYPDA-KGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      +.++++|++|+++++..+++.+.. +.+||+++ +.+++.|+++.+.+.+|..
T Consensus       218 ~~~~~v~vddva~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~  270 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAP  270 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCC
Confidence            567999999999999999886554 44788765 7899999999999998764

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.97  E-value=1.1e-29  Score=220.18  Aligned_cols=256  Identities=21%  Similarity=0.248  Sum_probs=178.5

Q ss_pred             eEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhh----hhcC--CC--CC-CCEEEEecCCCCh--
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSF----LKNL--PG--AS-ERLRIFHADLSHP--   73 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~----~~~~--~~--~~-~~~~~~~~Dl~d~--   73 (285)
                      +|+|||||||||++|+++|+++|  ++|+++.|+.     ........    +...  ..  .. .+++++.+|++++  
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~   75 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAA-----SEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRL   75 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccC-----CHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccC
Confidence            58999999999999999999998  6799999976     11111111    1110  00  01 4799999999864  


Q ss_pred             ----hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCccccc
Q 023244           74 ----DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        74 ----~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                          +.+.++.+++|+|||+|+..+..  .+...+.+.|+.++.++++++.+.+ .++||++||.+++.....  .+..|
T Consensus        76 gl~~~~~~~~~~~~d~vih~a~~~~~~--~~~~~~~~~nv~g~~~ll~~a~~~~-~~~~v~iSS~~v~~~~~~--~~~~~  150 (367)
T TIGR01746        76 GLSDAEWERLAENVDTIVHNGALVNWV--YPYSELRAANVLGTREVLRLAASGR-AKPLHYVSTISVLAAIDL--STVTE  150 (367)
T ss_pred             CcCHHHHHHHHhhCCEEEeCCcEeccC--CcHHHHhhhhhHHHHHHHHHHhhCC-CceEEEEccccccCCcCC--CCccc
Confidence                45677778899999999987653  2345788899999999999999887 788999999998754321  12233


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC--ccHHHHHHH-HhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSVRSSLAL-ILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~-~~~~~~~~~  226 (285)
                      +++...    ....+.+.|+.+|+++|.++..+.+ .|++++++|||.++|+.......  ..+..+... ......+..
T Consensus       151 ~~~~~~----~~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~  225 (367)
T TIGR01746       151 DDAIVT----PPPGLAGGYAQSKWVAELLVREASD-RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDS  225 (367)
T ss_pred             cccccc----cccccCCChHHHHHHHHHHHHHHHh-cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCC
Confidence            332211    0112346799999999999988764 49999999999999974333211  122222221 111111111


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ....++|+|++|++++++.++..+..   +++||+++ +.+++.|+++.+.+ .|.
T Consensus       226 ~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~  280 (367)
T TIGR01746       226 PELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGY  280 (367)
T ss_pred             CccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCC
Confidence            12356899999999999999987654   56788655 78999999999998 553

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02778 3,5-epimerase/4-reductase

Probab=99.97  E-value=4.7e-29  Score=209.62  Aligned_cols=220  Identities=17%  Similarity=0.186  Sum_probs=157.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +.|+||||||+||||++|++.|+++|++|+...                               .|+.|.+.+...++  
T Consensus         8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-------------------------------~~~~~~~~v~~~l~~~   56 (298)
T PLN02778          8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-------------------------------GRLENRASLEADIDAV   56 (298)
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEec-------------------------------CccCCHHHHHHHHHhc
Confidence            457999999999999999999999999986432                               23334445555554  


Q ss_pred             CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC----CCcccccCCC
Q 023244           82 GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----DVDMMDETFW  152 (285)
Q Consensus        82 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----~~~~~~e~~~  152 (285)
                      ++|+|||+||.....     ..++ ..++++|+.++.+|+++|++.+ ++ ++++||.++|++...    ...+++|+++
T Consensus        57 ~~D~ViH~Aa~~~~~~~~~~~~~p-~~~~~~Nv~gt~~ll~aa~~~g-v~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~  133 (298)
T PLN02778         57 KPTHVFNAAGVTGRPNVDWCESHK-VETIRANVVGTLTLADVCRERG-LV-LTNYATGCIFEYDDAHPLGSGIGFKEEDT  133 (298)
T ss_pred             CCCEEEECCcccCCCCchhhhhCH-HHHHHHHHHHHHHHHHHHHHhC-CC-EEEEecceEeCCCCCCCcccCCCCCcCCC
Confidence            589999999987531     2344 4899999999999999999998 75 566777777755321    1224666654


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .        .++.++|+.||.++|.++..+++     ..++|+..++|++...     ...+...+......+.  ...+
T Consensus       134 p--------~~~~s~Yg~sK~~~E~~~~~y~~-----~~~lr~~~~~~~~~~~-----~~~fi~~~~~~~~~~~--~~~s  193 (298)
T PLN02778        134 P--------NFTGSFYSKTKAMVEELLKNYEN-----VCTLRVRMPISSDLSN-----PRNFITKITRYEKVVN--IPNS  193 (298)
T ss_pred             C--------CCCCCchHHHHHHHHHHHHHhhc-----cEEeeecccCCccccc-----HHHHHHHHHcCCCeeE--cCCC
Confidence            2        23457899999999999988653     5688888777764211     1112233332222111  1237


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++|++++++.+++... .|+||++ ++.+|+.|+++.+++.++.
T Consensus       194 ~~yv~D~v~al~~~l~~~~-~g~yNigs~~~iS~~el~~~i~~~~~~  239 (298)
T PLN02778        194 MTILDELLPISIEMAKRNL-TGIYNFTNPGVVSHNEILEMYRDYIDP  239 (298)
T ss_pred             CEEHHHHHHHHHHHHhCCC-CCeEEeCCCCcccHHHHHHHHHHHhCC
Confidence            9999999999999997653 4799975 5689999999999999884

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.97  E-value=1.6e-29  Score=211.20  Aligned_cols=254  Identities=23%  Similarity=0.276  Sum_probs=185.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++.+++||||+||+|++|+++|.+.+  .+|.+++..+..+....+    ....   ....++++.+|++|...+...++
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e----~~~~---~~~~v~~~~~D~~~~~~i~~a~~   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAE----LTGF---RSGRVTVILGDLLDANSISNAFQ   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchh----hhcc---cCCceeEEecchhhhhhhhhhcc
Confidence            46789999999999999999999987  789999987621111111    0000   23589999999999999999999


Q ss_pred             CCCEEEEecccCCC-CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           82 GCTGVLHVATPVDF-EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        82 ~~d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      ++ .|+|+|+.... ...+..+..+++|+.||.+++++|++.+ ++++||+||..|+.+... ...-+|+.+..      
T Consensus        76 ~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~-v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p------  146 (361)
T KOG1430|consen   76 GA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELG-VKRLIYTSSAYVVFGGEP-IINGDESLPYP------  146 (361)
T ss_pred             Cc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhC-CCEEEEecCceEEeCCee-cccCCCCCCCc------
Confidence            99 88888876554 2232235899999999999999999999 999999999999877644 34456666543      


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc---cccCcceeeHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG---FLLNTSMVHVD  237 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~  237 (285)
                       ..+.++|+.||..+|.++++.+...++..+++||..||||++....+....    .+......+.   ....-+|++++
T Consensus       147 -~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~----~~~~g~~~f~~g~~~~~~~~~~~~  221 (361)
T KOG1430|consen  147 -LKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVE----ALKNGGFLFKIGDGENLNDFTYGE  221 (361)
T ss_pred             -cccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHH----HHHccCceEEeeccccccceEEec
Confidence             234468999999999999997654569999999999999996654433332    2222222211   14567899999


Q ss_pred             HHHHHHHHhhc-----CCCCCc-eEEEec-cccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLE-----YPDAKG-RYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~-----~~~~~~-~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .++.+.+.+..     .+...| .|++++ .++...+++..+.+.+|.
T Consensus       222 Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~  269 (361)
T KOG1430|consen  222 NVAWAHILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGY  269 (361)
T ss_pred             hhHHHHHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCC
Confidence            88887766653     233445 466654 577666666688888874

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.97  E-value=2.3e-29  Score=218.69  Aligned_cols=230  Identities=14%  Similarity=0.051  Sum_probs=169.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+|+|||||||||++++++|+++|++|++++|+..     ................+++++.+|++|++.+.++++  
T Consensus        59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~-----~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~  133 (390)
T PLN02657         59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKS-----GIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE  133 (390)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechh-----hccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh
Confidence            4679999999999999999999999999999999761     100000000000112368899999999999999987  


Q ss_pred             --CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 --GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 --~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                        ++|+||||++.....   . ...+++|+.++.++++++++.+ +++||++||.+++.                     
T Consensus       134 ~~~~D~Vi~~aa~~~~~---~-~~~~~vn~~~~~~ll~aa~~~g-v~r~V~iSS~~v~~---------------------  187 (390)
T PLN02657        134 GDPVDVVVSCLASRTGG---V-KDSWKIDYQATKNSLDAGREVG-AKHFVLLSAICVQK---------------------  187 (390)
T ss_pred             CCCCcEEEECCccCCCC---C-ccchhhHHHHHHHHHHHHHHcC-CCEEEEEeeccccC---------------------
Confidence              589999998853321   1 2456789999999999999998 89999999987531                     


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc--C-cceeeH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL--N-TSMVHV  236 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~i~~  236 (285)
                          +...|..+|...|..+..  ...+++++++||+.+||+..     ..   +.....+.+..+..++  . .++||+
T Consensus       188 ----p~~~~~~sK~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~-----~~---~~~~~~g~~~~~~GdG~~~~~~~I~v  253 (390)
T PLN02657        188 ----PLLEFQRAKLKFEAELQA--LDSDFTYSIVRPTAFFKSLG-----GQ---VEIVKDGGPYVMFGDGKLCACKPISE  253 (390)
T ss_pred             ----cchHHHHHHHHHHHHHHh--ccCCCCEEEEccHHHhcccH-----HH---HHhhccCCceEEecCCcccccCceeH
Confidence                124589999999998765  34689999999999997521     11   1112223332222232  2 257999


Q ss_pred             HHHHHHHHHhhcCCCC-CceEEEec--cccCHHHHHHHHHhhCCC
Q 023244          237 DDVARAHIFLLEYPDA-KGRYICSS--HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       237 ~D~a~~~~~~~~~~~~-~~~~~~~~--~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|.++..++.++.. +.+|++++  +.+|++|+++.+.+.+|+
T Consensus       254 ~DlA~~i~~~~~~~~~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~  298 (390)
T PLN02657        254 ADLASFIADCVLDESKINKVLPIGGPGKALTPLEQGEMLFRILGK  298 (390)
T ss_pred             HHHHHHHHHHHhCccccCCEEEcCCCCcccCHHHHHHHHHHHhCC
Confidence            9999999999976543 45788764  489999999999999986

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.97  E-value=7.1e-29  Score=208.67  Aligned_cols=236  Identities=22%  Similarity=0.184  Sum_probs=161.5

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCEEE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVL   87 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   87 (285)
                      |||||||||||++++++|+++|++|++++|+..        ........     .+    .|+.. ....+.+.++|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~-----~~----~~~~~-~~~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPP--------AGANTKWE-----GY----KPWAP-LAESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCC--------CCCcccce-----ee----ecccc-cchhhhcCCCCEEE
Confidence            699999999999999999999999999999872        11110000     11    12222 34455667899999


Q ss_pred             EecccCCCC--C-CChHHHHHHHHHHHHHHHHHHHHhcCCcc--EEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           88 HVATPVDFE--D-KEPEEVITQRAINGTLGILKSCLKSGTVK--RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        88 h~a~~~~~~--~-~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      |+|+.....  . .+....++++|+.++.++++++++.+ ++  .||+.||..+|+.  ....+++|+++.         
T Consensus        63 h~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~~i~~S~~~~yg~--~~~~~~~E~~~~---------  130 (292)
T TIGR01777        63 NLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAE-QKPKVFISASAVGYYGT--SEDRVFTEEDSP---------  130 (292)
T ss_pred             ECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcC-CCceEEEEeeeEEEeCC--CCCCCcCcccCC---------
Confidence            999975431  1 12234778899999999999999988 53  4555665554432  234467777632         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-cccCcceeeHHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLLNTSMVHVDDVAR  241 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~  241 (285)
                      .+.+.|+..+...|..+..+. +.+++++++||+.+|||... ........ .....+  ..+. .+..++|+|++|+|+
T Consensus       131 ~~~~~~~~~~~~~e~~~~~~~-~~~~~~~ilR~~~v~G~~~~-~~~~~~~~-~~~~~~--~~~g~~~~~~~~i~v~Dva~  205 (292)
T TIGR01777       131 AGDDFLAELCRDWEEAAQAAE-DLGTRVVLLRTGIVLGPKGG-ALAKMLPP-FRLGLG--GPLGSGRQWFSWIHIEDLVQ  205 (292)
T ss_pred             CCCChHHHHHHHHHHHhhhch-hcCCceEEEeeeeEECCCcc-hhHHHHHH-HhcCcc--cccCCCCcccccEeHHHHHH
Confidence            123446666666677665443 46899999999999999632 11111111 111111  1122 256789999999999


Q ss_pred             HHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++..+++++...++||++ ++.+|+.|+++.+.+.+|.
T Consensus       206 ~i~~~l~~~~~~g~~~~~~~~~~s~~di~~~i~~~~g~  243 (292)
T TIGR01777       206 LILFALENASISGPVNATAPEPVRNKEFAKALARALHR  243 (292)
T ss_pred             HHHHHhcCcccCCceEecCCCccCHHHHHHHHHHHhCC
Confidence            999999887667889875 4789999999999998875

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.97  E-value=6.3e-30  Score=209.86  Aligned_cols=223  Identities=26%  Similarity=0.340  Sum_probs=129.9

Q ss_pred             EecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhh-cCCC----------CCCCEEEEecCCCCh---
Q 023244           10 VTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLK-NLPG----------ASERLRIFHADLSHP---   73 (285)
Q Consensus        10 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~-~~~~----------~~~~~~~~~~Dl~d~---   73 (285)
                      |||||||+|++|+++|++++.  +|+++.|..     ........+. .+..          ..++++++.+|++++   
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~-----~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lG   75 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRAS-----SSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLG   75 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SS-----SHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCc-----ccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccC
Confidence            799999999999999999876  899999976     2112222221 1110          146999999999986   


Q ss_pred             ---hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           74 ---DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        74 ---~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                         +.+.++.+++|+|||+||..+...  +.+...+.|+.|++++++.|.+.+ .++|+|+||..+.... .  ..+.|.
T Consensus        76 L~~~~~~~L~~~v~~IiH~Aa~v~~~~--~~~~~~~~NV~gt~~ll~la~~~~-~~~~~~iSTa~v~~~~-~--~~~~~~  149 (249)
T PF07993_consen   76 LSDEDYQELAEEVDVIIHCAASVNFNA--PYSELRAVNVDGTRNLLRLAAQGK-RKRFHYISTAYVAGSR-P--GTIEEK  149 (249)
T ss_dssp             --HHHHHHHHHH--EEEE--SS-SBS---S--EEHHHHHHHHHHHHHHHTSSS----EEEEEEGGGTTS--T--TT--SS
T ss_pred             CChHHhhccccccceeeecchhhhhcc--cchhhhhhHHHHHHHHHHHHHhcc-CcceEEeccccccCCC-C--Cccccc
Confidence               467778889999999999988843  334688999999999999999776 5699999994332222 1  111111


Q ss_pred             CC-CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC--c-cHHHHHHHHh-cCcccc
Q 023244          151 FW-SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--G-SVRSSLALIL-GNREEY  225 (285)
Q Consensus       151 ~~-~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~--~-~~~~~~~~~~-~~~~~~  225 (285)
                      .. ...........+.++|.+||+++|.++.+++++.|++++|+|||.|+|....+...  . ....+..... +.-+..
T Consensus       150 ~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~  229 (249)
T PF07993_consen  150 VYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDL  229 (249)
T ss_dssp             S-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-
T ss_pred             ccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccc
Confidence            00 00001112234567899999999999999998779999999999999954333322  2 2222332222 222222


Q ss_pred             cc--ccCcceeeHHHHHHHH
Q 023244          226 GF--LLNTSMVHVDDVARAH  243 (285)
Q Consensus       226 ~~--~~~~~~i~~~D~a~~~  243 (285)
                      ..  +...+++++|.+|++|
T Consensus       230 ~~~~~~~~d~vPVD~va~aI  249 (249)
T PF07993_consen  230 PGDPDARLDLVPVDYVARAI  249 (249)
T ss_dssp             SB---TT--EEEHHHHHHHH
T ss_pred             cCCCCceEeEECHHHHHhhC
Confidence            22  4468999999999986

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN00016 RNA-binding protein; Provisional

Probab=99.96  E-value=1.1e-28  Score=214.48  Aligned_cols=232  Identities=19%  Similarity=0.194  Sum_probs=163.5

Q ss_pred             CCCeEEEe----cCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            4 GKGRVCVT----GGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVt----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ++|+||||    |||||||++|+++|+++||+|++++|+..............+.++.  ..+++++.+|+.|   +.++
T Consensus        51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS--SAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh--hcCceEEEecHHH---HHhh
Confidence            46789999    9999999999999999999999999986210000000000011110  1258899999987   4444


Q ss_pred             h--cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           80 I--AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        80 ~--~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                      +  .++|+|||+++.      +         ..++.+++++|++.| +++|||+||..+|+..  ...+..|+++.    
T Consensus       126 ~~~~~~d~Vi~~~~~------~---------~~~~~~ll~aa~~~g-vkr~V~~SS~~vyg~~--~~~p~~E~~~~----  183 (378)
T PLN00016        126 VAGAGFDVVYDNNGK------D---------LDEVEPVADWAKSPG-LKQFLFCSSAGVYKKS--DEPPHVEGDAV----  183 (378)
T ss_pred             hccCCccEEEeCCCC------C---------HHHHHHHHHHHHHcC-CCEEEEEccHhhcCCC--CCCCCCCCCcC----
Confidence            4  468999998652      1         345788999999998 9999999999877543  23345565542    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCcccccc--ccCccee
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYGF--LLNTSMV  234 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~i  234 (285)
                              .++. +|..+|.+++    +.+++++++||+++|||+....   ....+... ..+....+..  ...++|+
T Consensus       184 --------~p~~-sK~~~E~~l~----~~~l~~~ilRp~~vyG~~~~~~---~~~~~~~~~~~~~~i~~~g~g~~~~~~i  247 (378)
T PLN00016        184 --------KPKA-GHLEVEAYLQ----KLGVNWTSFRPQYIYGPGNNKD---CEEWFFDRLVRGRPVPIPGSGIQLTQLG  247 (378)
T ss_pred             --------CCcc-hHHHHHHHHH----HcCCCeEEEeceeEECCCCCCc---hHHHHHHHHHcCCceeecCCCCeeecee
Confidence                    1122 8999998774    4589999999999999975432   22222222 2333333332  5568999


Q ss_pred             eHHHHHHHHHHhhcCCCC-CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYPDA-KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|+|+++..+++++.. +++||+++ +.+|+.|+++.+.+.+|.
T Consensus       248 ~v~Dva~ai~~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~  293 (378)
T PLN00016        248 HVKDLASMFALVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGF  293 (378)
T ss_pred             cHHHHHHHHHHHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCC
Confidence            999999999999988643 46788765 689999999999998885

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.96  E-value=5.8e-28  Score=216.68  Aligned_cols=266  Identities=18%  Similarity=0.223  Sum_probs=180.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhh-c-------------CCC-----CCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLK-N-------------LPG-----ASE   61 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~-~-------------~~~-----~~~   61 (285)
                      .+|+|||||||||||++|++.|++.+.   +|+++.|..     ........+. +             .+.     ...
T Consensus       118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k-----~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~  192 (605)
T PLN02503        118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAK-----DKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLS  192 (605)
T ss_pred             cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecC-----CchhHHHHHHHHHhhhhhHHHHHHhcCccccccccc
Confidence            468999999999999999999998654   689999965     1111111211 1             010     135


Q ss_pred             CEEEEecCCCCh------hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           62 RLRIFHADLSHP------DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        62 ~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ++.++.+|++++      +..+.+.+++|+|||+|+..+.. .+ .+..+++|+.++.+++++|++.+.+++|||+||+.
T Consensus       193 Ki~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~-~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTay  270 (605)
T PLN02503        193 KLVPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ER-YDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAY  270 (605)
T ss_pred             cEEEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cC-HHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCce
Confidence            799999999987      45666777899999999988763 23 35889999999999999999875578999999998


Q ss_pred             eeeccCCCCcccccCCCC----------------------ch------------------hhh----------hhcCCCC
Q 023244          136 AVFYNDKDVDMMDETFWS----------------------DV------------------DYI----------RKLDSWG  165 (285)
Q Consensus       136 ~~~~~~~~~~~~~e~~~~----------------------~~------------------~~~----------~~~~~~~  165 (285)
                      +++...   +.+.|....                      +.                  +..          ..+..++
T Consensus       271 VyG~~~---G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~p  347 (605)
T PLN02503        271 VNGQRQ---GRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQ  347 (605)
T ss_pred             eecCCC---CeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCC
Confidence            875542   122232221                      00                  000          0124567


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCC---CCCc---cHHHHHHHHhcCccccc--cccCcceeeHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICP---KFAG---SVRSSLALILGNREEYG--FLLNTSMVHVD  237 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~---~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~i~~~  237 (285)
                      +.|..||+++|.++++..  .++|++|+||+.|.+-...+   +..+   ..........|.-..+.  .+...|+|++|
T Consensus       348 NtYt~TK~lAE~lV~~~~--~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD  425 (605)
T PLN02503        348 DTYVFTKAMGEMVINSMR--GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPAD  425 (605)
T ss_pred             ChHHHHHHHHHHHHHHhc--CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeec
Confidence            899999999999998654  47999999999994422111   1111   11111111122212122  26688999999


Q ss_pred             HHHHHHHHhhcC-C----CCCceEEEe-c--cccCHHHHHHHHHhhCCCCCC
Q 023244          238 DVARAHIFLLEY-P----DAKGRYICS-S--HTLTIQEMAEFLSAKYPEYPI  281 (285)
Q Consensus       238 D~a~~~~~~~~~-~----~~~~~~~~~-~--~~~s~~e~~~~i~~~~~~~~~  281 (285)
                      .++++++.++.. .    ....+||++ +  .++++.++.+.+.+.+...|+
T Consensus       426 ~vvna~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P~  477 (605)
T PLN02503        426 MVVNATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSPY  477 (605)
T ss_pred             HHHHHHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCCc
Confidence            999999998432 1    124579875 4  589999999999987655443

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.96  E-value=2.6e-28  Score=192.82  Aligned_cols=237  Identities=26%  Similarity=0.309  Sum_probs=158.2

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-CCCEE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-GCTGV   86 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~v   86 (285)
                      |+|||||||||++|+..|.+.||+|++++|++.        ....         +...   .+...+.+..... ++|+|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~--------~~~~---------~~~~---~v~~~~~~~~~~~~~~Dav   60 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPP--------KASQ---------NLHP---NVTLWEGLADALTLGIDAV   60 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCc--------chhh---------hcCc---cccccchhhhcccCCCCEE
Confidence            689999999999999999999999999999981        1111         1111   1112233444444 69999


Q ss_pred             EEecccCCCC---CCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           87 LHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        87 ih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      ||+||..-..   ..+..+...+.-+..|..|.+++.+... .+.+|.-|  ++-+|.......++|+.+...++....+
T Consensus        61 INLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaS--AvGyYG~~~~~~~tE~~~~g~~Fla~lc  138 (297)
T COG1090          61 INLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISAS--AVGYYGHSGDRVVTEESPPGDDFLAQLC  138 (297)
T ss_pred             EECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecc--eEEEecCCCceeeecCCCCCCChHHHHH
Confidence            9999974432   2233457788889999999999987652 33344333  3333344567788888765433332221


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHH---HHHhcCccccccccCcceeeHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL---ALILGNREEYGFLLNTSMVHVDDV  239 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~D~  239 (285)
                      .          .=|..... ++..|.+++++|.|+|.++.- +........+.   ....|.+     .++++|||++|+
T Consensus       139 ~----------~WE~~a~~-a~~~gtRvvllRtGvVLs~~G-GaL~~m~~~fk~glGG~~GsG-----rQ~~SWIhieD~  201 (297)
T COG1090         139 Q----------DWEEEALQ-AQQLGTRVVLLRTGVVLSPDG-GALGKMLPLFKLGLGGKLGSG-----RQWFSWIHIEDL  201 (297)
T ss_pred             H----------HHHHHHhh-hhhcCceEEEEEEEEEecCCC-cchhhhcchhhhccCCccCCC-----CceeeeeeHHHH
Confidence            1          11222222 234589999999999999731 11111222111   1222333     556799999999


Q ss_pred             HHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHhhCCC---CCCCC
Q 023244          240 ARAHIFLLEYPDAKGRYIC-SSHTLTIQEMAEFLSAKYPE---YPIPT  283 (285)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~---~~~~~  283 (285)
                      ++++.+++++....|.||+ ++.+++..+|.+.+++.+++   .++|.
T Consensus       202 v~~I~fll~~~~lsGp~N~taP~PV~~~~F~~al~r~l~RP~~~~vP~  249 (297)
T COG1090         202 VNAILFLLENEQLSGPFNLTAPNPVRNKEFAHALGRALHRPAILPVPS  249 (297)
T ss_pred             HHHHHHHHhCcCCCCcccccCCCcCcHHHHHHHHHHHhCCCccccCcH
Confidence            9999999999989999995 56899999999999999885   44553

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.96  E-value=7.6e-28  Score=190.05  Aligned_cols=258  Identities=19%  Similarity=0.177  Sum_probs=198.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCC-CCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA-SERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+.||||-||+-|++|++.|+++|++|.++.|+..   ..+.... ++...+.. +.+++++.+|++|...+.++++ 
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss---~~n~~ri-~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~   76 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSS---SFNTPRI-HLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE   76 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccc---cCCcccc-eeccccccCCceeEEEeccccchHHHHHHHHh
Confidence            3589999999999999999999999999999999751   1222222 33333332 4569999999999999999997 


Q ss_pred             -CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                       ++|-|+|+||+...  +.++|. .+.+++..|+.+|+++++..+. -.||...||.--|+..  ...+..|++|.    
T Consensus        77 v~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v--~~~pq~E~TPF----  149 (345)
T COG1089          77 VQPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLV--QEIPQKETTPF----  149 (345)
T ss_pred             cCchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCc--ccCccccCCCC----
Confidence             48999999999776  677775 8999999999999999999873 3578888877655433  56788888875    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-CCccHHHHHH-HHhcCccccc---cccCcc
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLA-LILGNREEYG---FLLNTS  232 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-~~~~~~~~~~-~~~~~~~~~~---~~~~~~  232 (285)
                           .|.+||+.+|..+-.+...+.+.+|+-.+.=+..|--+|..... .++.+..... ...|....+.   .++.||
T Consensus       150 -----yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRD  224 (345)
T COG1089         150 -----YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRD  224 (345)
T ss_pred             -----CCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEecccccccc
Confidence                 57899999999999999999988999888777777666653322 2222222222 2333332222   288999


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  277 (285)
                      |-|+.|.++++..+++.+.+....+.+++..|++|+++...+..|
T Consensus       225 WG~A~DYVe~mwlmLQq~~PddyViATg~t~sVrefv~~Af~~~g  269 (345)
T COG1089         225 WGHAKDYVEAMWLMLQQEEPDDYVIATGETHSVREFVELAFEMVG  269 (345)
T ss_pred             ccchHHHHHHHHHHHccCCCCceEEecCceeeHHHHHHHHHHHcC
Confidence            999999999999999987654444578899999999999988777

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.96  E-value=3.3e-28  Score=201.05  Aligned_cols=187  Identities=21%  Similarity=0.272  Sum_probs=141.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhc-CC-------CCCCCEEEEecCCCCh---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKN-LP-------GASERLRIFHADLSHP---   73 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~Dl~d~---   73 (285)
                      +++|+||||||+|++|+.+|+.+- .+|++++|..     ..+.....+.. ..       ...++++++.+|+..+   
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~-----s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lG   75 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQ-----SDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLG   75 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecC-----CHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCC
Confidence            479999999999999999999874 5999999976     22222222222 11       1357899999999854   


Q ss_pred             ---hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           74 ---DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        74 ---~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                         .+++++.+.+|.|||+||..+.-  .|..+....|+.||..+++.|.... .|.|+|+||+++...........+++
T Consensus        76 L~~~~~~~La~~vD~I~H~gA~Vn~v--~pYs~L~~~NVlGT~evlrLa~~gk-~Kp~~yVSsisv~~~~~~~~~~~~~~  152 (382)
T COG3320          76 LSERTWQELAENVDLIIHNAALVNHV--FPYSELRGANVLGTAEVLRLAATGK-PKPLHYVSSISVGETEYYSNFTVDFD  152 (382)
T ss_pred             CCHHHHHHHhhhcceEEecchhhccc--CcHHHhcCcchHhHHHHHHHHhcCC-CceeEEEeeeeeccccccCCCccccc
Confidence               57888889999999999998863  4556889999999999999998766 88999999999864443322222222


Q ss_pred             --CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCC
Q 023244          151 --FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICP  205 (285)
Q Consensus       151 --~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~  205 (285)
                        ++.    ...-..+.++|++|||.+|.++++.... |++++|+|||.|.|+...+
T Consensus       153 ~~~~~----~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG  204 (382)
T COG3320         153 EISPT----RNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTG  204 (382)
T ss_pred             ccccc----ccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccC
Confidence              111    1112345678999999999999998854 9999999999999987643

>PRK05865 hypothetical protein; Provisional

Probab=99.96  E-value=4.8e-27  Score=217.17  Aligned_cols=198  Identities=24%  Similarity=0.278  Sum_probs=154.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|+|||||||||++++++|+++|++|++++|+..        ..     .   ..++.++.+|++|.+.+.++++++|+
T Consensus         1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~--------~~-----~---~~~v~~v~gDL~D~~~l~~al~~vD~   64 (854)
T PRK05865          1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRP--------DS-----W---PSSADFIAADIRDATAVESAMTGADV   64 (854)
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCch--------hh-----c---ccCceEEEeeCCCHHHHHHHHhCCCE
Confidence            47999999999999999999999999999999751        00     1   12578899999999999999999999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      |||+|+....        .+++|+.++.++++++++.+ +++||++||.+                              
T Consensus        65 VVHlAa~~~~--------~~~vNv~GT~nLLeAa~~~g-vkr~V~iSS~~------------------------------  105 (854)
T PRK05865         65 VAHCAWVRGR--------NDHINIDGTANVLKAMAETG-TGRIVFTSSGH------------------------------  105 (854)
T ss_pred             EEECCCcccc--------hHHHHHHHHHHHHHHHHHcC-CCeEEEECCcH------------------------------
Confidence            9999985322        46889999999999999988 89999999842                              


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc--ccCcceeeHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF--LLNTSMVHVDDVARAH  243 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~D~a~~~  243 (285)
                            |.++|.++.    .++++++++||+++|||+..    .++.    ...........  ...++|+|++|+|+++
T Consensus       106 ------K~aaE~ll~----~~gl~~vILRp~~VYGP~~~----~~i~----~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai  167 (854)
T PRK05865        106 ------QPRVEQMLA----DCGLEWVAVRCALIFGRNVD----NWVQ----RLFALPVLPAGYADRVVQVVHSDDAQRLL  167 (854)
T ss_pred             ------HHHHHHHHH----HcCCCEEEEEeceEeCCChH----HHHH----HHhcCceeccCCCCceEeeeeHHHHHHHH
Confidence                  777787764    46899999999999999621    1111    11111111111  3356899999999999


Q ss_pred             HHhhcCCC-CCceEEEe-ccccCHHHHHHHHHhhC
Q 023244          244 IFLLEYPD-AKGRYICS-SHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       244 ~~~~~~~~-~~~~~~~~-~~~~s~~e~~~~i~~~~  276 (285)
                      ..++++.. .+++||++ ++.+|+.|+++.+.+..
T Consensus       168 ~~aL~~~~~~ggvyNIgsg~~~Si~EIae~l~~~~  202 (854)
T PRK05865        168 VRALLDTVIDSGPVNLAAPGELTFRRIAAALGRPM  202 (854)
T ss_pred             HHHHhCCCcCCCeEEEECCCcccHHHHHHHHhhhh
Confidence            99986543 45789865 56899999999998743

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=99.96  E-value=1.2e-27  Score=182.80  Aligned_cols=238  Identities=22%  Similarity=0.250  Sum_probs=183.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+|||||++|.+|++|.+.+..+|.  +=+++.-+.                           .+|+++.++.+.+|+ 
T Consensus         1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------------d~DLt~~a~t~~lF~~   53 (315)
T KOG1431|consen    1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------------DADLTNLADTRALFES   53 (315)
T ss_pred             CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------------cccccchHHHHHHHhc
Confidence            36899999999999999999988876  333333332                           389999999999997 


Q ss_pred             -CCCEEEEecccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           82 -GCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        82 -~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                       ++..|||+|+...-   ....+. ++++.|+...-|++..|-+.| +++++++.|++.|  +.....|++|+...    
T Consensus        54 ekPthVIhlAAmVGGlf~N~~ynl-dF~r~Nl~indNVlhsa~e~g-v~K~vsclStCIf--Pdkt~yPIdEtmvh----  125 (315)
T KOG1431|consen   54 EKPTHVIHLAAMVGGLFHNNTYNL-DFIRKNLQINDNVLHSAHEHG-VKKVVSCLSTCIF--PDKTSYPIDETMVH----  125 (315)
T ss_pred             cCCceeeehHhhhcchhhcCCCch-HHHhhcceechhHHHHHHHhc-hhhhhhhcceeec--CCCCCCCCCHHHhc----
Confidence             48999999998664   344554 899999999999999999999 9999999999875  33456788887753    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC------CccHHHHHHHHhcCccccc--c--
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF------AGSVRSSLALILGNREEYG--F--  227 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~------~~~~~~~~~~~~~~~~~~~--~--  227 (285)
                      .+|+.+....|+.+|+++...-+.+.+++|..++.+-|+++|||.+..+.      +..+..+..+...+...+.  +  
T Consensus       126 ~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG  205 (315)
T KOG1431|consen  126 NGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSG  205 (315)
T ss_pred             cCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCC
Confidence            34445556689999999999999999999999999999999999765442      2333333333333332222  1  


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCCCceEEE-ecc--ccCHHHHHHHHHhhCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDAKGRYIC-SSH--TLTIQEMAEFLSAKYP  277 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~-~~~--~~s~~e~~~~i~~~~~  277 (285)
                      ...|+|+|.+|+|+++++++.+-..-...++ +++  .+|++|+++.+.+.++
T Consensus       206 ~PlRqFiys~DLA~l~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~  258 (315)
T KOG1431|consen  206 SPLRQFIYSDDLADLFIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVD  258 (315)
T ss_pred             ChHHHHhhHhHHHHHHHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhC
Confidence            4478999999999999999986554444554 444  8999999999999774

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.2e-26  Score=193.65  Aligned_cols=232  Identities=18%  Similarity=0.142  Sum_probs=165.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      .|++|||||+|+||++++++|+++|++|+++.|+.        +....+...  ...++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRP--------DALDDLKAR--YGDRLWVLQLDVTDSAAVRAVVDRAF   71 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHh--ccCceEEEEccCCCHHHHHHHHHHHH
Confidence            47899999999999999999999999999999976        333332221  12368899999999998887764   


Q ss_pred             ----CCCEEEEecccCCCCC-----CChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+||......     .+..+..+++|+.++.++++++    ++.+ .++||++||..+....        
T Consensus        72 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--------  142 (276)
T PRK06482         72 AALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAY--------  142 (276)
T ss_pred             HHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCC--------
Confidence                3799999999865421     1223478889999999999997    4445 6899999997643221        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCce---ecCCCCCC--C---Cc-cHHHHHH
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMV---VGPFICPK--F---AG-SVRSSLA  216 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v---~g~~~~~~--~---~~-~~~~~~~  216 (285)
                                    ++...|+.||++.|.+++.++++   +|++++++|||.+   ||++....  .   .. ....+..
T Consensus       143 --------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  208 (276)
T PRK06482        143 --------------PGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRR  208 (276)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHH
Confidence                          23467999999999999988866   5899999999998   44432211  0   00 1111222


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhC
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKY  276 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~  276 (285)
                      .+.....       .-+.+++|++++++.++..+.....||+++ ...++.++++.+.+.+
T Consensus       209 ~~~~~~~-------~~~~d~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  262 (276)
T PRK06482        209 ALADGSF-------AIPGDPQKMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAAL  262 (276)
T ss_pred             HHhhccC-------CCCCCHHHHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHH
Confidence            2222211       124689999999999998765556788765 5677777777666544

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.95  E-value=1.8e-26  Score=191.07  Aligned_cols=223  Identities=17%  Similarity=0.192  Sum_probs=156.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|++|||||||+||+++++.|+++|++|++++|++.       +...........+.++.++.+|++|.+.+.+++++ 
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQD-------GANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKV   78 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChH-------HHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHH
Confidence            3588999999999999999999999999999999761       11112222222234678899999999988877653 


Q ss_pred             ------CCEEEEecccCCCC-----CCChHHHHHHHHHHH----HHHHHHHH-HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAING----TLGILKSC-LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            +|+|||+|+.....     ..+..+..+++|+.+    +..+++++ ++.+ .++||++||.......      
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~------  151 (262)
T PRK13394         79 AERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEAS------  151 (262)
T ss_pred             HHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCC------
Confidence                  79999999975431     112235778899999    66677777 5555 7899999997644221      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc-------HHHHHH
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS-------VRSSLA  216 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~-------~~~~~~  216 (285)
                                      ++...|+.+|...+.+++.++.+   .+++++++|||.+++|.........       ......
T Consensus       152 ----------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~  215 (262)
T PRK13394        152 ----------------PLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVK  215 (262)
T ss_pred             ----------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHH
Confidence                            23456999999999999888766   4899999999999998533221110       011111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .+.+..     ...++|++++|+++++++++.....  .| .|+++++
T Consensus       216 ~~~~~~-----~~~~~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g  258 (262)
T PRK13394        216 KVMLGK-----TVDGVFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHG  258 (262)
T ss_pred             HHHhcC-----CCCCCCCCHHHHHHHHHHHcCccccCCcCCEEeeCCc
Confidence            111111     2235899999999999999976432  24 4666654

>PRK12320 hypothetical protein; Provisional

Probab=99.95  E-value=9.9e-26  Score=204.51  Aligned_cols=204  Identities=18%  Similarity=0.202  Sum_probs=150.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+||||||+||||++|+++|+++|++|++++|.+        ..      .  ...+++++.+|++|+. +.++++++|+
T Consensus         1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~--------~~------~--~~~~ve~v~~Dl~d~~-l~~al~~~D~   63 (699)
T PRK12320          1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHP--------HD------A--LDPRVDYVCASLRNPV-LQELAGEADA   63 (699)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCh--------hh------c--ccCCceEEEccCCCHH-HHHHhcCCCE
Confidence            4799999999999999999999999999999875        11      0  1136789999999985 7788889999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      |||+|+....       ....+|+.++.|++++|++.+ + ++||+||..   +.+                        
T Consensus        64 VIHLAa~~~~-------~~~~vNv~Gt~nLleAA~~~G-v-RiV~~SS~~---G~~------------------------  107 (699)
T PRK12320         64 VIHLAPVDTS-------APGGVGITGLAHVANAAARAG-A-RLLFVSQAA---GRP------------------------  107 (699)
T ss_pred             EEEcCccCcc-------chhhHHHHHHHHHHHHHHHcC-C-eEEEEECCC---CCC------------------------
Confidence            9999986322       122579999999999999998 5 799999862   110                        


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF  245 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  245 (285)
                      ..|.    .+|.++.    .++++++++|++++|||.........+..+...... ..      ...+||++|++++++.
T Consensus       108 ~~~~----~aE~ll~----~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~-~~------pI~vIyVdDvv~alv~  172 (699)
T PRK12320        108 ELYR----QAETLVS----TGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVS-AR------PIRVLHLDDLVRFLVL  172 (699)
T ss_pred             cccc----HHHHHHH----hcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHc-CC------ceEEEEHHHHHHHHHH
Confidence            0132    3566653    356999999999999996543322333333322211 11      2246899999999999


Q ss_pred             hhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          246 LLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       246 ~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++.. ..|+||++ ++.+|+.|+++.+....+.
T Consensus       173 al~~~-~~GiyNIG~~~~~Si~el~~~i~~~~p~  205 (699)
T PRK12320        173 ALNTD-RNGVVDLATPDTTNVVTAWRLLRSVDPH  205 (699)
T ss_pred             HHhCC-CCCEEEEeCCCeeEHHHHHHHHHHhCCC
Confidence            99864 35689865 5789999999999887543

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.2e-25  Score=186.12  Aligned_cols=225  Identities=18%  Similarity=0.090  Sum_probs=156.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+|+||||+|+||++++++|+++|++|++++|++        +....+...  ...++..+.+|++|.+++.++++  
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~l~~~--~~~~~~~~~~D~~d~~~~~~~~~~~   72 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE--------AARADFEAL--HPDRALARLLDVTDFDAIDAVVADA   72 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH--------HHHHHHHhh--cCCCeeEEEccCCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999987        333333222  12367888999999998888776  


Q ss_pred             -----CCCEEEEecccCCCC--C---CChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE--D---KEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~--~---~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....  .   .+..+..+++|+.++.++++++.    +.+ .+++|++||..+..+.       
T Consensus        73 ~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~-------  144 (277)
T PRK06180         73 EATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITM-------  144 (277)
T ss_pred             HHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCC-------
Confidence                 379999999985431  1   12234678999999999999854    334 5799999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC---ccHHHHHHHHhcC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA---GSVRSSLALILGN  221 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~---~~~~~~~~~~~~~  221 (285)
                                     ++...|+.+|.+.|.+++.++.+   +|++++++|||.+.++.......   .....+.......
T Consensus       145 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  209 (277)
T PRK06180        145 ---------------PGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPI  209 (277)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHH
Confidence                           23467999999999999888765   48999999999998874322111   1111111000000


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  261 (285)
                      ...........+..++|+|++++.+++.+.....|..+..
T Consensus       210 ~~~~~~~~~~~~~~~~dva~~~~~~l~~~~~~~~~~~g~~  249 (277)
T PRK06180        210 RQAREAKSGKQPGDPAKAAQAILAAVESDEPPLHLLLGSD  249 (277)
T ss_pred             HHHHHhhccCCCCCHHHHHHHHHHHHcCCCCCeeEeccHH
Confidence            0000001123567899999999999988766555655544

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.5e-25  Score=185.56  Aligned_cols=233  Identities=16%  Similarity=0.104  Sum_probs=167.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+|+||||+|+||++++++|+++|++|++++|+.        +....+...  ....+.++.+|++|.+++.++++   
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDT--------ATLADLAEK--YGDRLLPLALDVTDRAAVFAAVETAV   72 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHh--ccCCeeEEEccCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999999999976        332222221  12367888999999998877765   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+||.....     ..+..+..+++|+.++..+++.+    ++.+ .+++|++||..++.+.        
T Consensus        73 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~--------  143 (275)
T PRK08263         73 EHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAF--------  143 (275)
T ss_pred             HHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCC--------
Confidence                469999999986541     11233588999999988877775    4455 6799999998765433        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC--ccHHHHHH--HHhcC
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA--GSVRSSLA--LILGN  221 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~--~~~~~  221 (285)
                                    +....|+.+|.+.+.+++.++.+   +|++++++|||.+.++.......  ........  .....
T Consensus       144 --------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~  209 (275)
T PRK08263        144 --------------PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE  209 (275)
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH
Confidence                          22356999999999999888765   58999999999998875421110  01110000  00000


Q ss_pred             ccccccccCcce-eeHHHHHHHHHHhhcCCCCCceEEEec--cccCHHHHHHHHHhh
Q 023244          222 REEYGFLLNTSM-VHVDDVARAHIFLLEYPDAKGRYICSS--HTLTIQEMAEFLSAK  275 (285)
Q Consensus       222 ~~~~~~~~~~~~-i~~~D~a~~~~~~~~~~~~~~~~~~~~--~~~s~~e~~~~i~~~  275 (285)
                      .     .....+ ++++|++++++.+++.+...+.|+.+.  ..+++.++.+.+.+.
T Consensus       210 ~-----~~~~~~~~~p~dva~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (275)
T PRK08263        210 Q-----WSERSVDGDPEAAAEALLKLVDAENPPLRLFLGSGVLDLAKADYERRLATW  261 (275)
T ss_pred             H-----HHhccCCCCHHHHHHHHHHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHH
Confidence            0     112245 899999999999999887777665433  578889999988874

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.94  E-value=3.3e-25  Score=221.34  Aligned_cols=258  Identities=20%  Similarity=0.201  Sum_probs=179.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC----CeEEEEecCCCCccccCccchhhhhc--------CCCCCCCEEEEecCCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKN--------LPGASERLRIFHADLSH   72 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d   72 (285)
                      .++|+|||||||+|++++++|++++    ++|+++.|..     ........+..        ......+++++.+|+++
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~ 1045 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAK-----SEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSK 1045 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcC-----ChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCC
Confidence            4789999999999999999999876    7899999975     11111111111        00112378999999975


Q ss_pred             h------hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC----
Q 023244           73 P------DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----  142 (285)
Q Consensus        73 ~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----  142 (285)
                      +      +.+.++.+++|+|||+|+..+..  .+...+...|+.++.+++++|++.+ +++|+|+||.++++....    
T Consensus      1046 ~~lgl~~~~~~~l~~~~d~iiH~Aa~~~~~--~~~~~~~~~nv~gt~~ll~~a~~~~-~~~~v~vSS~~v~~~~~~~~~~ 1122 (1389)
T TIGR03443      1046 EKFGLSDEKWSDLTNEVDVIIHNGALVHWV--YPYSKLRDANVIGTINVLNLCAEGK-AKQFSFVSSTSALDTEYYVNLS 1122 (1389)
T ss_pred             ccCCcCHHHHHHHHhcCCEEEECCcEecCc--cCHHHHHHhHHHHHHHHHHHHHhCC-CceEEEEeCeeecCcccccchh
Confidence            4      56777778899999999987753  3344666789999999999999877 889999999998743210    


Q ss_pred             ------CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC--CccHHHH
Q 023244          143 ------DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSS  214 (285)
Q Consensus       143 ------~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~  214 (285)
                            ....+.|+.+....    ...+.++|+.||+++|.++..+++ .|++++++|||+|||+...+..  ..++..+
T Consensus      1123 ~~~~~~~~~~~~e~~~~~~~----~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~ 1197 (1389)
T TIGR03443      1123 DELVQAGGAGIPESDDLMGS----SKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRM 1197 (1389)
T ss_pred             hhhhhccCCCCCcccccccc----cccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHH
Confidence                  01123343322111    112346799999999999988764 5999999999999998654432  2223333


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-cccCHHHHHHHHHhh
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSS-HTLTIQEMAEFLSAK  275 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~-~~~s~~e~~~~i~~~  275 (285)
                      .......+........++|++++|++++++.++.++..   ..+||+++ ..+++.++++.+.+.
T Consensus      1198 ~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443      1198 LKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred             HHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence            32221111111124468999999999999999876532   23688765 588999999999764

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.94  E-value=4.5e-25  Score=181.16  Aligned_cols=218  Identities=18%  Similarity=0.149  Sum_probs=155.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+||||||||+||++|+++|+++|++|+++.|+..       +....+. .......++.++.+|++|.+.+.++++ 
T Consensus         5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   77 (249)
T PRK12825          5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE-------EAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAA   77 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH-------HHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHH
Confidence            3578999999999999999999999999988777651       1111111 111123468899999999998887764 


Q ss_pred             ------CCCEEEEecccCCCCC-----CChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            ++|+|||+||......     .+.....+++|+.++.++++.+    ++.+ .+++|++||..++.+.      
T Consensus        78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~------  150 (249)
T PRK12825         78 AVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGW------  150 (249)
T ss_pred             HHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCC------
Confidence                  4799999999654421     2223577899999999998887    3455 7899999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      .....|+.+|.+.+.+++.++++   .+++++++|||.++|+..........   ...  ....
T Consensus       151 ----------------~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~---~~~--~~~~  209 (249)
T PRK12825        151 ----------------PGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAR---EAK--DAET  209 (249)
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhH---Hhh--hccC
Confidence                            22356999999999998888765   58999999999999986433211111   111  0011


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      +     ...+++++|+++++.+++.....  .| +|++.++
T Consensus       210 ~-----~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~i~~g  245 (249)
T PRK12825        210 P-----LGRSGTPEDIARAVAFLCSDASDYITGQVIEVTGG  245 (249)
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            1     22589999999999999976532  34 5666543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.94  E-value=8.7e-25  Score=182.17  Aligned_cols=219  Identities=17%  Similarity=0.169  Sum_probs=152.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +.... .........++.++.+|++|.+++.++++  
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRV--------EKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQA   81 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999875        21111 11111122368888999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.....+++|+.++.++++.+.+    .+ .++||++||...+...       
T Consensus        82 ~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~-------  153 (274)
T PRK07775         82 EEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQR-------  153 (274)
T ss_pred             HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC-------
Confidence                 469999999976531     1122346689999999999888653    33 5689999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.|.+++.++++.   |++++++|||.+.++............+......    
T Consensus       154 ---------------~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~----  214 (274)
T PRK07775        154 ---------------PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK----  214 (274)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH----
Confidence                           223569999999999999988764   8999999999987653211111111111111110    


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYIC  258 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  258 (285)
                      +.....+.+++++|+|+++++++.++....+||+
T Consensus       215 ~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~~  248 (274)
T PRK07775        215 WGQARHDYFLRASDLARAITFVAETPRGAHVVNM  248 (274)
T ss_pred             hcccccccccCHHHHHHHHHHHhcCCCCCCeeEE
Confidence            0011134699999999999999987654445664

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.94  E-value=5.1e-25  Score=181.17  Aligned_cols=222  Identities=20%  Similarity=0.132  Sum_probs=157.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+|+||||+|++|++++++|+++|++|++++|+..       +.......+.....++.++.+|++|.+++.++++  
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGD-------DAAATAELVEAAGGKARARQVDVRDRAALKAAVAAG   77 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-------HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            3578999999999999999999999999999999861       1111111121223358899999999998888875  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+++.....     ..+.....++.|+.++.++++++.    +.+ .++||++||...+...       
T Consensus        78 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-------  149 (251)
T PRK12826         78 VEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVG-------  149 (251)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccC-------
Confidence                 579999999876541     112235778999999999998874    344 6899999998654111       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                    .++...|+.+|.+++.+++.++.+   .+++++++|||+++||..........   ..... ...+
T Consensus       150 --------------~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~---~~~~~-~~~~  211 (251)
T PRK12826        150 --------------YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQW---AEAIA-AAIP  211 (251)
T ss_pred             --------------CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHH---HHHHH-hcCC
Confidence                          123456999999999999888765   48999999999999986433222111   11111 1112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEecccc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSSHTL  263 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~~~~  263 (285)
                      +.     .+++++|+|.++..++.....   +..+++.++..
T Consensus       212 ~~-----~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~  248 (251)
T PRK12826        212 LG-----RLGEPEDIAAAVLFLASDEARYITGQTLPVDGGAT  248 (251)
T ss_pred             CC-----CCcCHHHHHHHHHHHhCccccCcCCcEEEECCCcc
Confidence            22     689999999999998876432   33567766543

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.94  E-value=7.6e-25  Score=203.46  Aligned_cols=219  Identities=16%  Similarity=0.147  Sum_probs=157.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +.|+||||||+||||++|++.|.++|++|..                               ..+|++|.+.+...++  
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-------------------------------~~~~l~d~~~v~~~i~~~  427 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-------------------------------GKGRLEDRSSLLADIRNV  427 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe-------------------------------eccccccHHHHHHHHHhh
Confidence            4578999999999999999999999988631                               0145778888877776  


Q ss_pred             CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccC----CCCcccccCCC
Q 023244           82 GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND----KDVDMMDETFW  152 (285)
Q Consensus        82 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~----~~~~~~~e~~~  152 (285)
                      ++|+|||+||..+.     .+.++ ...+++|+.++.+|+++|++.+ + ++|++||..+|.+..    ....+++|+++
T Consensus       428 ~pd~Vih~Aa~~~~~~~~~~~~~~-~~~~~~N~~gt~~l~~a~~~~g-~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~  504 (668)
T PLN02260        428 KPTHVFNAAGVTGRPNVDWCESHK-VETIRANVVGTLTLADVCRENG-L-LMMNFATGCIFEYDAKHPEGSGIGFKEEDK  504 (668)
T ss_pred             CCCEEEECCcccCCCCCChHHhCH-HHHHHHHhHHHHHHHHHHHHcC-C-eEEEEcccceecCCcccccccCCCCCcCCC
Confidence            58999999998642     12344 4889999999999999999998 6 577888888775532    12236777653


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                      .        .++.++|+.||.++|.++..+.     +..++|+.++|++.... ..+++..+..    ....+..  ..+
T Consensus       505 ~--------~~~~~~Yg~sK~~~E~~~~~~~-----~~~~~r~~~~~~~~~~~-~~nfv~~~~~----~~~~~~v--p~~  564 (668)
T PLN02260        505 P--------NFTGSFYSKTKAMVEELLREYD-----NVCTLRVRMPISSDLSN-PRNFITKISR----YNKVVNI--PNS  564 (668)
T ss_pred             C--------CCCCChhhHHHHHHHHHHHhhh-----hheEEEEEEecccCCCC-ccHHHHHHhc----cceeecc--CCC
Confidence            2        2345789999999999998764     35788888888643221 1123322222    1111111  235


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~  277 (285)
                      ..+++|++.+++.+++. ..+|+||+++ +.+|+.|+++.+.+..+
T Consensus       565 ~~~~~~~~~~~~~l~~~-~~~giyni~~~~~~s~~e~a~~i~~~~~  609 (668)
T PLN02260        565 MTVLDELLPISIEMAKR-NLRGIWNFTNPGVVSHNEILEMYKDYID  609 (668)
T ss_pred             ceehhhHHHHHHHHHHh-CCCceEEecCCCcCcHHHHHHHHHHhcC
Confidence            78888899888888874 3468999765 57999999999999774

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.94  E-value=7e-25  Score=181.15  Aligned_cols=221  Identities=16%  Similarity=0.182  Sum_probs=153.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||||+||++++++|+++|++|++++|++        +... ...++.....++.++.+|++|.+++.++++  
T Consensus         4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   75 (258)
T PRK12429          4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLND--------EAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYA   75 (258)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            57999999999999999999999999999999987        2221 112221223478899999999998888776  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHH----HHHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLG----ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+|+.....     ..+..+..+++|+.++.+    +++++++.+ .++||++||...+.+.       
T Consensus        76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~-------  147 (258)
T PRK12429         76 VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGS-------  147 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCC-------
Confidence                 479999999975541     112234677889888544    455555556 7899999998765432       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc-------HHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS-------VRSSLAL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~-------~~~~~~~  217 (285)
                                     ++...|+.+|.+.+.+.+.++.+   .+++++++|||.+++|.........       .......
T Consensus       148 ---------------~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  212 (258)
T PRK12429        148 ---------------AGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLED  212 (258)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHH
Confidence                           23467999999999988887665   3799999999999998643221110       0000000


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .....     ...++|++++|+|+++.+++.....  .| .|+++++
T Consensus       213 ~~~~~-----~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g  254 (258)
T PRK12429        213 VLLPL-----VPQKRFTTVEEIADYALFLASFAAKGVTGQAWVVDGG  254 (258)
T ss_pred             HHhcc-----CCccccCCHHHHHHHHHHHcCccccCccCCeEEeCCC
Confidence            11111     1235799999999999999976432  34 4566654

>PRK09135 pteridine reductase; Provisional

Probab=99.93  E-value=1.9e-24  Score=177.59  Aligned_cols=220  Identities=16%  Similarity=0.130  Sum_probs=150.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++++||||||+|+||++++++|+++|++|++++|+.+       +....+. .+.. ....+.++.+|++|.+.+..+++
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   77 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSA-------AEADALAAELNALRPGSAAALQADLLDPDALPELVA   77 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4578999999999999999999999999999998651       1111111 1111 12358889999999998888776


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                             .+|+|||+||.....     ..+..+.++++|+.++.++++++.+.  .....++++|+....          
T Consensus        78 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------  147 (249)
T PRK09135         78 ACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAE----------  147 (249)
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhc----------
Confidence                   379999999974421     11223578999999999999998653  112466666653321          


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                         .+         .++...|+.||.++|.+++.+++++  +++++++||+.++||..........   ........ ++
T Consensus       148 ---~~---------~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~---~~~~~~~~-~~  211 (249)
T PRK09135        148 ---RP---------LKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEA---RQAILART-PL  211 (249)
T ss_pred             ---CC---------CCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHH---HHHHHhcC-Cc
Confidence               00         1345679999999999999998775  6999999999999997543222211   11111111 12


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  261 (285)
                      .     .+.+++|+|+++.+++....  .+.+|+++++
T Consensus       212 ~-----~~~~~~d~a~~~~~~~~~~~~~~g~~~~i~~g  244 (249)
T PRK09135        212 K-----RIGTPEDIAEAVRFLLADASFITGQILAVDGG  244 (249)
T ss_pred             C-----CCcCHHHHHHHHHHHcCccccccCcEEEECCC
Confidence            1     34568999999977775432  2346787654

>PRK06182 short chain dehydrogenase; Validated

Probab=99.93  E-value=2.4e-24  Score=179.48  Aligned_cols=215  Identities=18%  Similarity=0.146  Sum_probs=152.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +....+..     .+++++.+|++|.++++++++   
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~--------~~l~~~~~-----~~~~~~~~Dv~~~~~~~~~~~~~~   69 (273)
T PRK06182          3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRV--------DKMEDLAS-----LGVHPLSLDVTDEASIKAAVDTII   69 (273)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHh-----CCCeEEEeeCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999987        33333322     257889999999999888876   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHH----HHHHHHHHhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGT----LGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~----~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          ++|+|||+||.....     ..+..+..+++|+.++    ..+++.+++.+ .+++|++||.....+.        
T Consensus        70 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~--------  140 (273)
T PRK06182         70 AEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYT--------  140 (273)
T ss_pred             HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCC--------
Confidence                589999999975531     1122357889999885    45555666666 6799999997643222        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC--------CccHHHH---
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF--------AGSVRSS---  214 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~--------~~~~~~~---  214 (285)
                                    +....|+.+|.+.+.+.+.++.+   .|++++++|||.+.+|......        .......   
T Consensus       141 --------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  206 (273)
T PRK06182        141 --------------PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQA  206 (273)
T ss_pred             --------------CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHH
Confidence                          22346999999999988777644   4899999999999987532100        0000000   


Q ss_pred             -HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 023244          215 -LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       215 -~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  261 (285)
                       ...+ ...     .....+.+++|+|+++++++........|+++..
T Consensus       207 ~~~~~-~~~-----~~~~~~~~~~~vA~~i~~~~~~~~~~~~~~~g~~  248 (273)
T PRK06182        207 VAASM-RST-----YGSGRLSDPSVIADAISKAVTARRPKTRYAVGFG  248 (273)
T ss_pred             HHHHH-HHh-----hccccCCCHHHHHHHHHHHHhCCCCCceeecCcc
Confidence             0001 000     1123678999999999999987655556776544

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2e-24  Score=177.76  Aligned_cols=222  Identities=17%  Similarity=0.166  Sum_probs=155.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|+++||||+|+||++++++|+++|++|+++.|+.        +.... ..... .+.++.++.+|++|.+++.++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~   71 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDA--------EAAERVAAAIA-AGGRAFARQGDVGSAEAVEAL   71 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCH--------HHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHH
Confidence            555678999999999999999999999999999999976        22211 11111 234688999999999988887


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+++.....     ..+..+..+++|+.++.++.+.+    ++.+ .++||++||....++.   
T Consensus        72 ~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~---  147 (252)
T PRK06138         72 VDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGG---  147 (252)
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCC---
Confidence            65       579999999975431     11223467899999987776665    4445 6899999998765432   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc--HHHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS--VRSSLALI  218 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~--~~~~~~~~  218 (285)
                                         +....|+.+|.+.+.+++.++.+.   |++++++|||.++++.........  ........
T Consensus       148 -------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~  208 (252)
T PRK06138        148 -------------------RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREAL  208 (252)
T ss_pred             -------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHH
Confidence                               234569999999999999987665   899999999999988533221111  01111111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEec
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSS  260 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~  260 (285)
                       ....+     ...|++++|+++++++++.++..  .|. +.+.+
T Consensus       209 -~~~~~-----~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  247 (252)
T PRK06138        209 -RARHP-----MNRFGTAEEVAQAALFLASDESSFATGTTLVVDG  247 (252)
T ss_pred             -HhcCC-----CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence             11111     12488999999999999987543  244 44544

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-24  Score=177.16  Aligned_cols=230  Identities=21%  Similarity=0.139  Sum_probs=162.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||||+||+.++++|+++|++|++++|++        +....+ ..+  ...++.++.+|++|.+++..+++  
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~--------~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   71 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDA--------AALAAFADAL--GDARFVPVACDLTDAASLAAALANA   71 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999976        222222 222  12368889999999998887775  


Q ss_pred             -----CCCEEEEecccCCCC---C--CChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE---D--KEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~---~--~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||++|.....   .  .+.....+++|+.++.++++++.    +.+ .+++|++||.......       
T Consensus        72 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  143 (257)
T PRK07074         72 AAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAAL-------  143 (257)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCCC-------
Confidence                 379999999875431   1  12223557799999988888874    334 5789999996532111       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                      ....|+.+|.+.+.+++.++.++   |++++++|||.++++..................  ..+
T Consensus       144 ----------------~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~  205 (257)
T PRK07074        144 ----------------GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKK--WYP  205 (257)
T ss_pred             ----------------CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHh--cCC
Confidence                            11359999999999999988664   799999999999987532211111111111111  111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec-cccCHHHHHHHHHhh
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSS-HTLTIQEMAEFLSAK  275 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~-~~~s~~e~~~~i~~~  275 (285)
                           .++|++++|+++++.+++....  ..|. +++.+ ...+.+|+.+.+...
T Consensus       206 -----~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~  255 (257)
T PRK07074        206 -----LQDFATPDDVANAVLFLASPAARAITGVCLPVDGGLTAGNREMARTLTLE  255 (257)
T ss_pred             -----CCCCCCHHHHHHHHHHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence                 3489999999999999996532  2354 45555 567799999988654

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.5e-24  Score=181.32  Aligned_cols=224  Identities=15%  Similarity=0.093  Sum_probs=155.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-C--CCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-L--PGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +|+++||||||++|+++++.|+++|++|++++|+.        +....+.. .  .....++.++.+|++|++++.. ++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~   73 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNP--------EKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQ   73 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HH
Confidence            57899999999999999999999999999999976        22222111 1  1113478899999999988766 43


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+|+.....     ..+..+..+++|+.++.++++.+    ++.+ .++||++||.....+.     
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~-----  147 (280)
T PRK06914         74 LVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGF-----  147 (280)
T ss_pred             HHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCC-----
Confidence                   369999999875531     11223467889999988888875    4455 6899999997654332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHH---HcCCcEEEeccCceecCCCCCCCC---------ccHHH
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFICPKFA---------GSVRS  213 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~i~~~i~Rp~~v~g~~~~~~~~---------~~~~~  213 (285)
                                       ++...|+.+|...+.+++.++.   ..|++++++|||.++++.......         .....
T Consensus       148 -----------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  210 (280)
T PRK06914        148 -----------------PGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKE  210 (280)
T ss_pred             -----------------CCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHH
Confidence                             2345799999999999888763   358999999999999884321110         00011


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccC
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLT  264 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s  264 (285)
                      ....+....    ......+++++|+|+++++++.++.....|++++ ..++
T Consensus       211 ~~~~~~~~~----~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~  258 (280)
T PRK06914        211 YMKKIQKHI----NSGSDTFGNPIDVANLIVEIAESKRPKLRYPIGKGVKLM  258 (280)
T ss_pred             HHHHHHHHH----hhhhhccCCHHHHHHHHHHHHcCCCCCcccccCCchHHH
Confidence            111111000    0112367999999999999999887665677654 4444

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.93  E-value=1.9e-24  Score=178.25  Aligned_cols=221  Identities=18%  Similarity=0.201  Sum_probs=152.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+.        +....+.. ......++.++.+|+.|.+++..+++  
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGE--------AGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAA   72 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999976        22222211 11112468889999999996665543  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+|+.....     .....+.+++.|+.++..+++.+    ++.+ .+++|++||...+.+.       
T Consensus        73 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~-------  144 (255)
T TIGR01963        73 AAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVAS-------  144 (255)
T ss_pred             HHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCC-------
Confidence                 479999999975531     11223467889999988887776    4455 7899999997654332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc-------HHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS-------VRSSLAL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~-------~~~~~~~  217 (285)
                                     +....|+.+|.+.+.+++.++.+   .+++++++||+.+++|.........       .......
T Consensus       145 ---------------~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (255)
T TIGR01963       145 ---------------PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIRE  209 (255)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHH
Confidence                           12356999999999998877655   3899999999999998522110000       0000000


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ...     .....+++++++|+|+++++++....  ..| .|+++++
T Consensus       210 ~~~-----~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~g~~~~~~~g  251 (255)
T TIGR01963       210 VML-----PGQPTKRFVTVDEVAETALFLASDAAAGITGQAIVLDGG  251 (255)
T ss_pred             HHH-----ccCccccCcCHHHHHHHHHHHcCccccCccceEEEEcCc
Confidence            000     11234589999999999999997642  234 4677654

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.93  E-value=9e-25  Score=179.51  Aligned_cols=226  Identities=18%  Similarity=0.154  Sum_probs=154.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+..       +....+ ..+...+.++.++.+|++|++++..+++  
T Consensus         6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (248)
T PRK07806          6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKA-------PRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTA   78 (248)
T ss_pred             CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCch-------HhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            589999999999999999999999999999998651       111111 1111113467889999999998887765  


Q ss_pred             -----CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           82 -----GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                           ++|+|||+|+.......++ ...+++|+.++.++++++.+.- ..+++|++||........      .+..    
T Consensus        79 ~~~~~~~d~vi~~ag~~~~~~~~~-~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~------~~~~----  147 (248)
T PRK07806         79 REEFGGLDALVLNASGGMESGMDE-DYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPT------VKTM----  147 (248)
T ss_pred             HHhCCCCcEEEECCCCCCCCCCCc-ceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCcc------ccCC----
Confidence                 4799999998654333334 3778899999999999998652 135899999965321110      0111    


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcc
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS  232 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                             +...+|+.||.+.|.+++.++.+   .++++++++|+.+-++.............   ......+     ...
T Consensus       148 -------~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~  212 (248)
T PRK07806        148 -------PEYEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGA---IEARREA-----AGK  212 (248)
T ss_pred             -------ccccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHH---HHHHHhh-----hcc
Confidence                   12357999999999999998765   47999999999887763221100000000   0000111     237


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCc-eEEEecccc
Q 023244          233 MVHVDDVARAHIFLLEYPDAKG-RYICSSHTL  263 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~~~  263 (285)
                      +++++|+|+++.++++.....| .|++++...
T Consensus       213 ~~~~~dva~~~~~l~~~~~~~g~~~~i~~~~~  244 (248)
T PRK07806        213 LYTVSEFAAEVARAVTAPVPSGHIEYVGGADY  244 (248)
T ss_pred             cCCHHHHHHHHHHHhhccccCccEEEecCccc
Confidence            9999999999999999765555 477766543

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.93  E-value=6.3e-24  Score=175.72  Aligned_cols=219  Identities=20%  Similarity=0.126  Sum_probs=148.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        .......++...+.++.++.+|++|.+++.++++  
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE--------LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAA   78 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch--------HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHH
Confidence            358999999999999999999999999999999875        1111112221223467889999999988777665  


Q ss_pred             -----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                           .+|++||+||....      ...+.....+++|+.++..+++.    +++.+ .++||++||...++.       
T Consensus        79 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~-------  150 (260)
T PRK12823         79 VEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRGI-------  150 (260)
T ss_pred             HHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccCC-------
Confidence                 47999999985321      11222347788998887755544    44455 579999999865311       


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCC--------C-CCccHHHH
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP--------K-FAGSVRSS  214 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~--------~-~~~~~~~~  214 (285)
                                       +..+|+.||.+.+.+++.++.++   |+++++++||++++|....        . .......+
T Consensus       151 -----------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (260)
T PRK12823        151 -----------------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQI  213 (260)
T ss_pred             -----------------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHH
Confidence                             12359999999999999988775   8999999999999974110        0 00111111


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ....... .++.     .+.+++|+|+++.+++.....  .| .++++++
T Consensus       214 ~~~~~~~-~~~~-----~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  257 (260)
T PRK12823        214 VDQTLDS-SLMK-----RYGTIDEQVAAILFLASDEASYITGTVLPVGGG  257 (260)
T ss_pred             HHHHhcc-CCcc-----cCCCHHHHHHHHHHHcCcccccccCcEEeecCC
Confidence            1111111 1222     467899999999999975432  34 4566554

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.93  E-value=2.5e-24  Score=168.76  Aligned_cols=183  Identities=31%  Similarity=0.373  Sum_probs=139.6

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCEEE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVL   87 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   87 (285)
                      |+|+||||++|+.++++|+++|++|+++.|++        ++...       ..+++++.+|+.|++.+.+.++++|+||
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~--------~~~~~-------~~~~~~~~~d~~d~~~~~~al~~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSP--------SKAED-------SPGVEIIQGDLFDPDSVKAALKGADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSG--------GGHHH-------CTTEEEEESCTTCHHHHHHHHTTSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCc--------hhccc-------ccccccceeeehhhhhhhhhhhhcchhh
Confidence            79999999999999999999999999999988        33322       3489999999999999999999999999


Q ss_pred             EecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCch
Q 023244           88 HVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS  167 (285)
Q Consensus        88 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~  167 (285)
                      |+++....            ....++++++++++.+ ++++|++||.+++......  ...+..           +....
T Consensus        66 ~~~~~~~~------------~~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~--~~~~~~-----------~~~~~  119 (183)
T PF13460_consen   66 HAAGPPPK------------DVDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGL--FSDEDK-----------PIFPE  119 (183)
T ss_dssp             ECCHSTTT------------HHHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSE--EEGGTC-----------GGGHH
T ss_pred             hhhhhhcc------------cccccccccccccccc-cccceeeeccccCCCCCcc--cccccc-----------cchhh
Confidence            99974333            1667889999999998 9999999999865432111  111111           11245


Q ss_pred             hHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhh
Q 023244          168 YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLL  247 (285)
Q Consensus       168 Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~  247 (285)
                      |...|..+|.+++    +.+++++++||+.+||+.....  .....            ......++|+.+|+|.+++.++
T Consensus       120 ~~~~~~~~e~~~~----~~~~~~~ivrp~~~~~~~~~~~--~~~~~------------~~~~~~~~i~~~DvA~~~~~~l  181 (183)
T PF13460_consen  120 YARDKREAEEALR----ESGLNWTIVRPGWIYGNPSRSY--RLIKE------------GGPQGVNFISREDVAKAIVEAL  181 (183)
T ss_dssp             HHHHHHHHHHHHH----HSTSEEEEEEESEEEBTTSSSE--EEESS------------TSTTSHCEEEHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHH----hcCCCEEEEECcEeEeCCCcce--eEEec------------cCCCCcCcCCHHHHHHHHHHHh
Confidence            8899998888774    4589999999999999863311  11100            1123448999999999999988


Q ss_pred             cC
Q 023244          248 EY  249 (285)
Q Consensus       248 ~~  249 (285)
                      ++
T Consensus       182 ~~  183 (183)
T PF13460_consen  182 EN  183 (183)
T ss_dssp             H-
T ss_pred             CC
Confidence            64

...

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.93  E-value=3.7e-24  Score=175.47  Aligned_cols=220  Identities=20%  Similarity=0.176  Sum_probs=155.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |.+++|+|+||||+|+||++++++|+++|++|++++|++        ..... .......+.++.++.+|++|++++.++
T Consensus         1 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (246)
T PRK05653          1 MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNE--------EAAEALAAELRAAGGEARVLVFDVSDEAAVRAL   72 (246)
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCh--------hHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence            655568999999999999999999999999999999986        22111 122222234788999999999988777


Q ss_pred             hcC-------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           80 IAG-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +++       +|+|||++|.....     ..+.....++.|+.+..++++++.    +.+ .++||++||.....+.   
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~---  148 (246)
T PRK05653         73 IEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGN---  148 (246)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCC---
Confidence            653       59999999875441     112234678899999999988885    345 6899999997654221   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         .+...|+.+|.+.+.+++.++++   .+++++++||+.++++....    .......... 
T Consensus       149 -------------------~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~----~~~~~~~~~~-  204 (246)
T PRK05653        149 -------------------PGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEG----LPEEVKAEIL-  204 (246)
T ss_pred             -------------------CCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhh----hhHHHHHHHH-
Confidence                               23456999999999998888765   37999999999999986422    1111111111 


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ...+     ...+++++|+++++.+++.....  .| .|+++++
T Consensus       205 ~~~~-----~~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  243 (246)
T PRK05653        205 KEIP-----LGRLGQPEEVANAVAFLASDAASYITGQVIPVNGG  243 (246)
T ss_pred             hcCC-----CCCCcCHHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence            1111     23689999999999999975332  34 4566554

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.93  E-value=1e-23  Score=165.10  Aligned_cols=208  Identities=17%  Similarity=0.193  Sum_probs=153.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ..|.++|||||+.||.++++.|++.|++|++..|+.        ++...+...... ..+..+..|++|+++++.+++  
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~--------drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~   75 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARRE--------ERLEALADEIGA-GAALALALDVTDRAAVEAAIEAL   75 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH--------HHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHH
Confidence            357899999999999999999999999999999988        555555432211 478899999999988666554  


Q ss_pred             -----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                           ++|++||+||....      +.++| +.++++|+.|..+...++    .+++ -+++|++||.++.+..      
T Consensus        76 ~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw-~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y------  147 (246)
T COG4221          76 PEEFGRIDILVNNAGLALGDPLDEADLDDW-DRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPY------  147 (246)
T ss_pred             HHhhCcccEEEecCCCCcCChhhhCCHHHH-HHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccC------
Confidence                 48999999997553      22344 599999999988877765    4454 5699999999865443      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC-CCccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~-~~~~~~~~~~~~~~~~  222 (285)
                                      +..+.|+.+|++...+...+.++.   +++++.+-||.+-+...... ...-.........   
T Consensus       148 ----------------~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~---  208 (246)
T COG4221         148 ----------------PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYK---  208 (246)
T ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhc---
Confidence                            344679999999998888887664   79999999999955422211 1111111111111   


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCCCc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG  254 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  254 (285)
                             ...++..+|+|+.+.++++.|..-.
T Consensus       209 -------~~~~l~p~dIA~~V~~~~~~P~~vn  233 (246)
T COG4221         209 -------GGTALTPEDIAEAVLFAATQPQHVN  233 (246)
T ss_pred             -------cCCCCCHHHHHHHHHHHHhCCCccc
Confidence                   1268999999999999999886543

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.93  E-value=2.9e-24  Score=177.46  Aligned_cols=222  Identities=15%  Similarity=0.151  Sum_probs=156.6

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|+++||||+|+||+++++.|+++|++|++++|+.        +....+...  ...++.++.+|++|.+++.++++ 
T Consensus         4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   73 (257)
T PRK07067          4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKP--------ARARLAALE--IGPAAIAVSLDVTRQDSIDRIVAA   73 (257)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHH
Confidence            4568999999999999999999999999999999977        222222211  12358889999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+|+.....     ..+..+..+++|+.++.++++++.+.    +...+||++||.....+.      
T Consensus        74 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------  147 (257)
T PRK07067         74 AVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE------  147 (257)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC------
Confidence                  479999999975431     11233578999999999999998643    113589999997543222      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC------ccHHHHHHH
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA------GSVRSSLAL  217 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~------~~~~~~~~~  217 (285)
                                      ++...|+.||.+.+.+++.++.+   .|+++++++||.++++.......      .........
T Consensus       148 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  211 (257)
T PRK07067        148 ----------------ALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKR  211 (257)
T ss_pred             ----------------CCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHH
Confidence                            23467999999999999888775   58999999999999975321100      000000111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~~  261 (285)
                      ..+...+     .+++++++|+|+++.+++.....   +..++++++
T Consensus       212 ~~~~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg  253 (257)
T PRK07067        212 LVGEAVP-----LGRMGVPDDLTGMALFLASADADYIVAQTYNVDGG  253 (257)
T ss_pred             HHhhcCC-----CCCccCHHHHHHHHHHHhCcccccccCcEEeecCC
Confidence            1122222     34899999999999999986532   345776654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.9e-24  Score=177.91  Aligned_cols=235  Identities=21%  Similarity=0.205  Sum_probs=163.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+++||||+|+||+++++.|+++|++|++++|+.        +.... ...+..  ...++.++.+|++|.+++.+++
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNP--------DKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAV   77 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHH
Confidence            458999999999999999999999999999999976        22111 111111  1246888999999999888877


Q ss_pred             c-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG---TVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+|+....      ...+....++++|+.++.++++++.+..   ..++||++||..++...    
T Consensus        78 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~----  153 (276)
T PRK05875         78 DAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH----  153 (276)
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC----
Confidence            6       57999999986432      1112234778899999999988765431   14689999998754221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.+|.+.|.+++.++.+.   +++++++|||.+.++........  ........ .
T Consensus       154 ------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~-~  212 (276)
T PRK05875        154 ------------------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITES--PELSADYR-A  212 (276)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccC--HHHHHHHH-c
Confidence                              234679999999999999988765   69999999999988753221111  11111111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEec-ccc----CHHHHHHHHHhhC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSS-HTL----TIQEMAEFLSAKY  276 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~-~~~----s~~e~~~~i~~~~  276 (285)
                      ..++     ..+++++|+|+++.+++..+..   +.++++++ ..+    +..|+++.+....
T Consensus       213 ~~~~-----~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~  270 (276)
T PRK05875        213 CTPL-----PRVGEVEDVANLAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGAD  270 (276)
T ss_pred             CCCC-----CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHH
Confidence            1112     2578899999999999987543   33567654 443    6777777666543

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=3.8e-24  Score=176.60  Aligned_cols=220  Identities=19%  Similarity=0.166  Sum_probs=153.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+..      ...............++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDD------EELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQ   75 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCch------hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999998651      01111111111123468899999999988777665   


Q ss_pred             ----CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhc----CC-----ccEEEEeccceeeeccC
Q 023244           82 ----GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS----GT-----VKRVVYTSSNAAVFYND  141 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~-----~~~~v~~SS~~~~~~~~  141 (285)
                          .+|+|||+||.....       ..+..+..+++|+.++.++++++.+.    ..     .++||++||..+..+. 
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-  154 (256)
T PRK12745         76 AAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS-  154 (256)
T ss_pred             HhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC-
Confidence                479999999975421       11233578999999999998887542    11     4679999998765433 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           ++...|+.+|.+.|.+++.++.+   +|++++++|||.+.++......    .......
T Consensus       155 ---------------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~  209 (256)
T PRK12745        155 ---------------------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT----AKYDALI  209 (256)
T ss_pred             ---------------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc----hhHHhhh
Confidence                                 22356999999999999988865   5899999999999987543211    1111111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .....+.     ..|.+++|+++++.+++.....  .| .|+++++
T Consensus       210 ~~~~~~~-----~~~~~~~d~a~~i~~l~~~~~~~~~G~~~~i~gg  250 (256)
T PRK12745        210 AKGLVPM-----PRWGEPEDVARAVAALASGDLPYSTGQAIHVDGG  250 (256)
T ss_pred             hhcCCCc-----CCCcCHHHHHHHHHHHhCCcccccCCCEEEECCC
Confidence            1111122     3688999999999998865422  24 5676654

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=5.4e-24  Score=175.64  Aligned_cols=219  Identities=18%  Similarity=0.172  Sum_probs=154.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +.... ...+...+.++.++.+|++|.+++++++++
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDP--------AKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA   80 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999976        22211 111211233588899999999988888753


Q ss_pred             -------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           83 -------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 -------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             +|+|||+||.....     ..+..+..+++|+.++.++++++.+.    + .+++|++||.......      
T Consensus        81 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~------  153 (255)
T PRK07523         81 FEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALAR------  153 (255)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCC------
Confidence                   79999999975431     12223577889999999999988653    3 6799999997643221      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.+|.+.+.+++.++.+   +|++++++|||.+.++........  ......+. ...
T Consensus       154 ----------------~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~--~~~~~~~~-~~~  214 (255)
T PRK07523        154 ----------------PGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVAD--PEFSAWLE-KRT  214 (255)
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccC--HHHHHHHH-hcC
Confidence                            23457999999999999888764   489999999999998853221111  11111111 111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      +.     ..+..++|+|.++.+++.....  .| .+++.++
T Consensus       215 ~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~i~~~gg  250 (255)
T PRK07523        215 PA-----GRWGKVEELVGACVFLASDASSFVNGHVLYVDGG  250 (255)
T ss_pred             CC-----CCCcCHHHHHHHHHHHcCchhcCccCcEEEECCC
Confidence            22     2688999999999999975432  34 4555543

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.3e-24  Score=173.96  Aligned_cols=216  Identities=17%  Similarity=0.144  Sum_probs=153.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+ ........++.++.+|++|.+++.++++ 
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   76 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINA--------EGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADA   76 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        221111 1111112367788999999998877665 


Q ss_pred             ------CCCEEEEecccCCC--------CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||....        ...+..+.++++|+.++.++++++.+.   ...++||++||..++..     
T Consensus        77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-----  151 (250)
T PRK07774         77 TVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWLY-----  151 (250)
T ss_pred             HHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccCC-----
Confidence                  47999999997532        111223477899999999998888753   11579999999876421     


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                          .+.|+.||++.|.+++.+++++   ++++++++||.+.++......+..  .......+.
T Consensus       152 --------------------~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~--~~~~~~~~~  209 (250)
T PRK07774        152 --------------------SNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKE--FVADMVKGI  209 (250)
T ss_pred             --------------------ccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHH--HHHHHHhcC
Confidence                                2459999999999999998774   799999999999887643322111  111111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKGRYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~  261 (285)
                        ++.     .+.+++|+|++++.++....   .+..|+++++
T Consensus       210 --~~~-----~~~~~~d~a~~~~~~~~~~~~~~~g~~~~v~~g  245 (250)
T PRK07774        210 --PLS-----RMGTPEDLVGMCLFLLSDEASWITGQIFNVDGG  245 (250)
T ss_pred             --CCC-----CCcCHHHHHHHHHHHhChhhhCcCCCEEEECCC
Confidence              111     36789999999999987642   2335776554

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.93  E-value=3.8e-24  Score=176.02  Aligned_cols=228  Identities=18%  Similarity=0.201  Sum_probs=155.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHh-c
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAI-A   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~-~   81 (285)
                      .+|+|+||||||+||+.++++|+++|++|+++.|+.        +.....  .+ ...+++++.+|++|. +.+.+.+ .
T Consensus        16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~--~~-~~~~~~~~~~Dl~d~~~~l~~~~~~   84 (251)
T PLN00141         16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDV--------DKAKTS--LP-QDPSLQIVRADVTEGSDKLVEAIGD   84 (251)
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCH--------HHHHHh--cc-cCCceEEEEeeCCCCHHHHHHHhhc
Confidence            468999999999999999999999999999999986        222111  11 123688999999984 6677777 6


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+|||+++.....  ++. ..++.|..++.++++++++.+ +++||++||.++|+...  ..+..+..    .   . 
T Consensus        85 ~~d~vi~~~g~~~~~--~~~-~~~~~n~~~~~~ll~a~~~~~-~~~iV~iSS~~v~g~~~--~~~~~~~~----~---~-  150 (251)
T PLN00141         85 DSDAVICATGFRRSF--DPF-APWKVDNFGTVNLVEACRKAG-VTRFILVSSILVNGAAM--GQILNPAY----I---F-  150 (251)
T ss_pred             CCCEEEECCCCCcCC--CCC-CceeeehHHHHHHHHHHHHcC-CCEEEEEccccccCCCc--ccccCcch----h---H-
Confidence            899999998864321  121 335678899999999999888 89999999998754321  11111100    0   0 


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVAR  241 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  241 (285)
                      ..+...|..+|..+|.+++    ..|++++++||++++++......   .      .....     .....+|+.+|+|+
T Consensus       151 ~~~~~~~~~~k~~~e~~l~----~~gi~~~iirpg~~~~~~~~~~~---~------~~~~~-----~~~~~~i~~~dvA~  212 (251)
T PLN00141        151 LNLFGLTLVAKLQAEKYIR----KSGINYTIVRPGGLTNDPPTGNI---V------MEPED-----TLYEGSISRDQVAE  212 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHH----hcCCcEEEEECCCccCCCCCceE---E------ECCCC-----ccccCcccHHHHHH
Confidence            0111234567888887664    35899999999999986422110   0      00000     01125799999999


Q ss_pred             HHHHhhcCCCCC-ceEE-Eec---cccCHHHHHHHHHh
Q 023244          242 AHIFLLEYPDAK-GRYI-CSS---HTLTIQEMAEFLSA  274 (285)
Q Consensus       242 ~~~~~~~~~~~~-~~~~-~~~---~~~s~~e~~~~i~~  274 (285)
                      ++..++.++... .++. ++.   ...+++++...+++
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (251)
T PLN00141        213 VAVEALLCPESSYKVVEIVARADAPKRSYKDLFASIKQ  250 (251)
T ss_pred             HHHHHhcChhhcCcEEEEecCCCCCchhHHHHHHHhhc
Confidence            999999887653 4453 332   25789999888765

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1e-23  Score=173.79  Aligned_cols=219  Identities=18%  Similarity=0.184  Sum_probs=152.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +++|+||||||+||++++++|+++|++|+++ .|+.        +.. .........+.++.++.+|++|.+++.++++ 
T Consensus         6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~   77 (254)
T PRK12746          6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNK--------QAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQ   77 (254)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHH
Confidence            4799999999999999999999999999876 4544        111 1111221123468889999999998887765 


Q ss_pred             ------------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCC
Q 023244           82 ------------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 ------------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (285)
                                  .+|+|||+||.....     ..+.....+++|+.++.++++.+.+. ...+++|++||..++...   
T Consensus        78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~---  154 (254)
T PRK12746         78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGF---  154 (254)
T ss_pred             HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCC---
Confidence                        479999999975441     11223567889999999999998764 214689999998764322   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.+|.+.|.+++.++.+   .++++++++||.+++|.........  .+... ..
T Consensus       155 -------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~--~~~~~-~~  212 (254)
T PRK12746        155 -------------------TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDP--EIRNF-AT  212 (254)
T ss_pred             -------------------CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccCh--hHHHH-HH
Confidence                               23456999999999998888765   4799999999999988543211110  01111 11


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKGRYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~  261 (285)
                      ....+     ..+++++|+++++.+++..+.   .+..|+++++
T Consensus       213 ~~~~~-----~~~~~~~dva~~~~~l~~~~~~~~~g~~~~i~~~  251 (254)
T PRK12746        213 NSSVF-----GRIGQVEDIADAVAFLASSDSRWVTGQIIDVSGG  251 (254)
T ss_pred             hcCCc-----CCCCCHHHHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence            11122     267899999999998887643   2346776554

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=7.9e-24  Score=174.13  Aligned_cols=222  Identities=18%  Similarity=0.141  Sum_probs=155.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |...+|+++||||||+||++++++|+++|++|++++|++        +.... ...+.. ..++.++.+|++|.+++.++
T Consensus         1 ~~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~   71 (251)
T PRK07231          1 MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNE--------EAAERVAAEILA-GGRAIAVAADVSDEADVEAA   71 (251)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHH
Confidence            555678999999999999999999999999999999987        22222 122211 34688999999999999887


Q ss_pred             hc-------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCC
Q 023244           80 IA-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      ++       .+|+|||+|+.....      ..+..+..+++|+.++.++.+.+.+    .+ .++||++||..++...  
T Consensus        72 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~--  148 (251)
T PRK07231         72 VAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPR--  148 (251)
T ss_pred             HHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCC--
Confidence            75       469999999874321      1122357889999988777776654    44 6899999998765332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          ++...|+.+|...+.+++.++.++   ++++++++||.+.++..................
T Consensus       149 --------------------~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~  208 (251)
T PRK07231        149 --------------------PGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFL  208 (251)
T ss_pred             --------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHh
Confidence                                234579999999999888887653   899999999999876533211110011111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCC--CceE-EEec
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRY-ICSS  260 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~  260 (285)
                      . ..+     ...+++++|+|.++++++.....  .|.+ .+.+
T Consensus       209 ~-~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~g  246 (251)
T PRK07231        209 A-TIP-----LGRLGTPEDIANAALFLASDEASWITGVTLVVDG  246 (251)
T ss_pred             c-CCC-----CCCCcCHHHHHHHHHHHhCccccCCCCCeEEECC
Confidence            1 111     23689999999999999975432  3554 4544

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.9e-24  Score=176.86  Aligned_cols=219  Identities=16%  Similarity=0.110  Sum_probs=153.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+ .+++|+||||||+||++++++|+++|++|++++|+.        +...       ...+++++.+|++|++++.+++
T Consensus         1 m~-~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~--------~~~~-------~~~~~~~~~~D~~d~~~~~~~~   64 (270)
T PRK06179          1 MS-NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNP--------ARAA-------PIPGVELLELDVTDDASVQAAV   64 (270)
T ss_pred             CC-CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCh--------hhcc-------ccCCCeeEEeecCCHHHHHHHH
Confidence            54 357899999999999999999999999999999986        1111       1136788999999999988887


Q ss_pred             cC-------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 AG-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      ++       +|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .++||++||..++...    
T Consensus        65 ~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~----  139 (270)
T PRK06179         65 DEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPA----  139 (270)
T ss_pred             HHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCC----
Confidence            63       69999999985531     11223588999999988888875    4555 7899999997654322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC--ccHHHHHHHHh
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA--GSVRSSLALIL  219 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~~~  219 (285)
                                        +....|+.+|...+.+++.++.+   .|+++++++||.+.++.......  ...........
T Consensus       140 ------------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~  201 (270)
T PRK06179        140 ------------------PYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERA  201 (270)
T ss_pred             ------------------CCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHH
Confidence                              23457999999999998887655   48999999999998875432211  01111000000


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS  259 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  259 (285)
                      ...... .........++|+|+.++.++..+.....|..+
T Consensus       202 ~~~~~~-~~~~~~~~~~~~va~~~~~~~~~~~~~~~~~~~  240 (270)
T PRK06179        202 VVSKAV-AKAVKKADAPEVVADTVVKAALGPWPKMRYTAG  240 (270)
T ss_pred             HHHHHH-HhccccCCCHHHHHHHHHHHHcCCCCCeeEecC
Confidence            000000 001124578899999999999876555556554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=6.4e-24  Score=174.80  Aligned_cols=225  Identities=16%  Similarity=0.054  Sum_probs=154.3

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ..+++||||||+|+||++++++|+++|++|+++.|+..      .............+.++.++.+|+++.+++.++++ 
T Consensus         4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (252)
T PRK06077          4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRA------EEMNETLKMVKENGGEGIGVLADVSTREGCETLAKA   77 (252)
T ss_pred             CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCh------HHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHH
Confidence            34689999999999999999999999999988776531      11111112111122357788999999998877765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|+|||+||.....     .....+..+++|+.+..++++++.+. ...++||++||..++...         
T Consensus        78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  148 (252)
T PRK06077         78 TIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPA---------  148 (252)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCC---------
Confidence                  479999999974431     11122477899999999999888754 213689999998765322         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                   ++...|+.+|...|.+++.+++++  ++++.+++||.+.++...... ...............    
T Consensus       149 -------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~----  210 (252)
T PRK06077        149 -------------YGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLF-KVLGMSEKEFAEKFT----  210 (252)
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhh-hcccccHHHHHHhcC----
Confidence                         345679999999999999988775  699999999999887421110 000000000111111    


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCC-CceEEEecc
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDA-KGRYICSSH  261 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~~~~  261 (285)
                       ....+++++|+|+++++++..+.. +..|+++++
T Consensus       211 -~~~~~~~~~dva~~~~~~~~~~~~~g~~~~i~~g  244 (252)
T PRK06077        211 -LMGKILDPEEVAEFVAAILKIESITGQVFVLDSG  244 (252)
T ss_pred             -cCCCCCCHHHHHHHHHHHhCccccCCCeEEecCC
Confidence             123789999999999999976544 446776654

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.92  E-value=9.4e-24  Score=173.34  Aligned_cols=220  Identities=13%  Similarity=0.120  Sum_probs=153.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+++||||+|+||++++++|+++|++|+++.++.+      ........++...+.++.++.+|++|.+++.+++++ 
T Consensus         5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (247)
T PRK12935          5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSK------EAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEA   78 (247)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcH------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            3589999999999999999999999999987665431      111111222222234688999999999988887764 


Q ss_pred             ------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcccc
Q 023244           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            +|+|||+|+.....     ..+..+..+++|+.++.++++++...   ...+++|++||..+..+.        
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  150 (247)
T PRK12935         79 VNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG--------  150 (247)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC--------
Confidence                  69999999985541     11233578899999999999888642   115699999997654332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    ++...|+.+|.+.+.+++.++.+.   ++++++++||.+.++.... .+.   ........ ..  
T Consensus       151 --------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~-~~~---~~~~~~~~-~~--  209 (247)
T PRK12935        151 --------------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAE-VPE---EVRQKIVA-KI--  209 (247)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhh-ccH---HHHHHHHH-hC--
Confidence                          233569999999998888877664   8999999999998764221 111   11111111 11  


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  261 (285)
                         ..+.+++++|++++++++++...  .+..|+++++
T Consensus       210 ---~~~~~~~~edva~~~~~~~~~~~~~~g~~~~i~~g  244 (247)
T PRK12935        210 ---PKKRFGQADEIAKGVVYLCRDGAYITGQQLNINGG  244 (247)
T ss_pred             ---CCCCCcCHHHHHHHHHHHcCcccCccCCEEEeCCC
Confidence               12378999999999999997542  3346776654

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=175.50  Aligned_cols=217  Identities=21%  Similarity=0.240  Sum_probs=151.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |. ++|+|+||||+|+||++++++|+++|++|++++|+.        +....+...     +++++.+|++|.++++.++
T Consensus         1 m~-~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~--------~~~~~l~~~-----~~~~~~~Dl~d~~~~~~~~   66 (277)
T PRK05993          1 MD-MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKE--------EDVAALEAE-----GLEAFQLDYAEPESIAALV   66 (277)
T ss_pred             CC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHC-----CceEEEccCCCHHHHHHHH
Confidence            44 467899999999999999999999999999999987        333333322     5788899999998877766


Q ss_pred             c--------CCCEEEEecccCCCC-----CCChHHHHHHHHHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCC
Q 023244           81 A--------GCTGVLHVATPVDFE-----DKEPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~--------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +        .+|+|||+||.....     ..+..+..+++|+.+    ++.+++.+++.+ .++||++||..++...   
T Consensus        67 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~---  142 (277)
T PRK05993         67 AQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPM---  142 (277)
T ss_pred             HHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCC---
Confidence            4        369999999875541     112234788999998    666777777776 7899999997653221   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHH--------
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVR--------  212 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~--------  212 (285)
                                         ++...|+.||++.|.+++.++.+   .|+++++++||.+.++...........        
T Consensus       143 -------------------~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~  203 (277)
T PRK05993        143 -------------------KYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSV  203 (277)
T ss_pred             -------------------CccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccch
Confidence                               23467999999999998887644   589999999999987743211000000        


Q ss_pred             ---HHH---HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 023244          213 ---SSL---ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS  259 (285)
Q Consensus       213 ---~~~---~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  259 (285)
                         .+.   .......     ......+.++++|+.++.++.++.....|..+
T Consensus       204 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~i~~a~~~~~~~~~~~~~  251 (277)
T PRK05993        204 HRAAYQQQMARLEGGG-----SKSRFKLGPEAVYAVLLHALTAPRPRPHYRVT  251 (277)
T ss_pred             hHHHHHHHHHHHHhhh-----hccccCCCHHHHHHHHHHHHcCCCCCCeeeeC
Confidence               000   0000000     00112468999999999999877655455443

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.92  E-value=4.7e-24  Score=178.80  Aligned_cols=204  Identities=21%  Similarity=0.189  Sum_probs=147.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh------
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI------   80 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------   80 (285)
                      +|+||||||++|++++++|+++|++|++++|++        +...        ..+++.+.+|+.|++.+..++      
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~--------~~~~--------~~~~~~~~~d~~d~~~l~~a~~~~~~~   64 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSS--------SSSA--------GPNEKHVKFDWLDEDTWDNPFSSDDGM   64 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCC--------cccc--------CCCCccccccCCCHHHHHHHHhcccCc
Confidence            489999999999999999999999999999987        1111        125667789999999999998      


Q ss_pred             cC-CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           81 AG-CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        81 ~~-~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++ +|.|+|+++....    .        .....+++++|++.| +++||++||..+....                   
T Consensus        65 ~g~~d~v~~~~~~~~~----~--------~~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~-------------------  112 (285)
T TIGR03649        65 EPEISAVYLVAPPIPD----L--------APPMIKFIDFARSKG-VRRFVLLSASIIEKGG-------------------  112 (285)
T ss_pred             CCceeEEEEeCCCCCC----h--------hHHHHHHHHHHHHcC-CCEEEEeeccccCCCC-------------------
Confidence            56 8999999864221    1        123468899999999 9999999986542110                   


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc-c-cccCcceeeHH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY-G-FLLNTSMVHVD  237 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~~~  237 (285)
                                ..+...|.+++.   ..|++++++||+.++++......   .    ..+......+ . .++.++|++++
T Consensus       113 ----------~~~~~~~~~l~~---~~gi~~tilRp~~f~~~~~~~~~---~----~~~~~~~~~~~~~g~~~~~~v~~~  172 (285)
T TIGR03649       113 ----------PAMGQVHAHLDS---LGGVEYTVLRPTWFMENFSEEFH---V----EAIRKENKIYSATGDGKIPFVSAD  172 (285)
T ss_pred             ----------chHHHHHHHHHh---ccCCCEEEEeccHHhhhhccccc---c----cccccCCeEEecCCCCccCcccHH
Confidence                      012223444432   14899999999999865421110   0    1111212112 1 36678999999


Q ss_pred             HHHHHHHHhhcCCCC-CceEEE-eccccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLEYPDA-KGRYIC-SSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~~~~~-~~~~~~-~~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|+++..++.++.. ++.|++ +++.+|+.|+++.+.+.+|+
T Consensus       173 Dva~~~~~~l~~~~~~~~~~~l~g~~~~s~~eia~~l~~~~g~  215 (285)
T TIGR03649       173 DIARVAYRALTDKVAPNTDYVVLGPELLTYDDVAEILSRVLGR  215 (285)
T ss_pred             HHHHHHHHHhcCCCcCCCeEEeeCCccCCHHHHHHHHHHHhCC
Confidence            999999999987654 456775 55899999999999999987

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=8.4e-24  Score=186.79  Aligned_cols=231  Identities=17%  Similarity=0.142  Sum_probs=159.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CC-------C--CCCCEEEEecCCCCh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LP-------G--ASERLRIFHADLSHP   73 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-------~--~~~~~~~~~~Dl~d~   73 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+.        +....+.. +.       .  ...++.++.+|++|.
T Consensus        79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~--------ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~  150 (576)
T PLN03209         79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSA--------QRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP  150 (576)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHhhhhccccccccccCceEEEEecCCCH
Confidence            467899999999999999999999999999999987        22222111 10       0  123688999999999


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      +++.+.+.++|+|||++|.......++ ...+++|+.++.++++++++.+ +++||++||.++.....      .... .
T Consensus       151 esI~~aLggiDiVVn~AG~~~~~v~d~-~~~~~VN~~Gt~nLl~Aa~~ag-VgRIV~VSSiga~~~g~------p~~~-~  221 (576)
T PLN03209        151 DQIGPALGNASVVICCIGASEKEVFDV-TGPYRIDYLATKNLVDAATVAK-VNHFILVTSLGTNKVGF------PAAI-L  221 (576)
T ss_pred             HHHHHHhcCCCEEEEccccccccccch-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEEccchhcccCc------cccc-h
Confidence            999999999999999998754322233 3678899999999999999888 89999999986531110      0000 0


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcce
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM  233 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                               .....|...|..+|..+.    ..|+++++||||.++++.........+.     .......+     ..+
T Consensus       222 ---------~sk~~~~~~KraaE~~L~----~sGIrvTIVRPG~L~tp~d~~~~t~~v~-----~~~~d~~~-----gr~  278 (576)
T PLN03209        222 ---------NLFWGVLCWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNLT-----LSEEDTLF-----GGQ  278 (576)
T ss_pred             ---------hhHHHHHHHHHHHHHHHH----HcCCCEEEEECCeecCCcccccccccee-----eccccccC-----CCc
Confidence                     122457788888888764    4699999999999998743211110000     00011111     246


Q ss_pred             eeHHHHHHHHHHhhcCCC-CCc-eEEEec-c---ccCHHHHHHHHHh
Q 023244          234 VHVDDVARAHIFLLEYPD-AKG-RYICSS-H---TLTIQEMAEFLSA  274 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~-~~~-~~~~~~-~---~~s~~e~~~~i~~  274 (285)
                      +..+|+|+++++++.++. ..+ +|.+.+ .   ..++.++++.+-.
T Consensus       279 isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~~~~~~~ip~  325 (576)
T PLN03209        279 VSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPMEELLAKIPS  325 (576)
T ss_pred             cCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCHHHHHHhccc
Confidence            899999999999998664 334 454433 2   2566666665544

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=174.09  Aligned_cols=231  Identities=21%  Similarity=0.238  Sum_probs=158.1

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +.++|++|||||+|+||++++++|+++|++|++++|+.        +......++...+.++.++.+|+++.+++.++++
T Consensus         4 ~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   75 (258)
T PRK08628          4 NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSA--------PDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVE   75 (258)
T ss_pred             CcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCCh--------hhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            44568999999999999999999999999999999977        2222222222223478899999999998888775


Q ss_pred             -------CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 -------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                             .+|+|||+||.....    ..+..+..++.|+.+..++.+.+.+.  ...++||++||..+..+.        
T Consensus        76 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------  147 (258)
T PRK08628         76 QTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQ--------  147 (258)
T ss_pred             HHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCC--------
Confidence                   479999999964321    11334578899999999988887542  114689999998765332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc--HHHHHHHHhcCcc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS--VRSSLALILGNRE  223 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~  223 (285)
                                    ++...|+.||...+.+++.++.+   .+++++.++||.+++|.........  ........... .
T Consensus       148 --------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~  212 (258)
T PRK08628        148 --------------GGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAK-I  212 (258)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhc-C
Confidence                          23456999999999999998765   4899999999999998532111000  00001111111 1


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEeccccCHHH
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSHTLTIQE  267 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~~~s~~e  267 (285)
                      ++    ...++.++|+|+++.+++....  ..|. +.+.++...+++
T Consensus       213 ~~----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~gg~~~~~~  255 (258)
T PRK08628        213 PL----GHRMTTAEEIADTAVFLLSERSSHTTGQWLFVDGGYVHLDR  255 (258)
T ss_pred             Cc----cccCCCHHHHHHHHHHHhChhhccccCceEEecCCcccccc
Confidence            11    0157889999999999997642  3343 455555444433

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.6e-23  Score=174.40  Aligned_cols=216  Identities=17%  Similarity=0.102  Sum_probs=146.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+++||||+|+||++++++|+++|++|++.+|+.+       .......++...+.++.++.+|++|.+++.++++. 
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~-------~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKP-------GLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEA   77 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH-------HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999998761       11111222222234678899999999988887753 


Q ss_pred             ------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            +|+|||+||.....     ..+..+..+++|+.++.++.+++.    +.+..+++|++||..++.+.       
T Consensus        78 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~-------  150 (275)
T PRK05876         78 FRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPN-------  150 (275)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCC-------
Confidence                  69999999975431     112234778999999999888874    33324689999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++...........  ..........
T Consensus       151 ---------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~~  213 (275)
T PRK05876        151 ---------------AGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGA--ACAQSSTTGS  213 (275)
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCc--cccccccccc
Confidence                           34467999999755555555544   489999999999988743221000000  0000000000


Q ss_pred             cc-cccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YG-FLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~-~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .. ....+++++++|+|+.++.++.++
T Consensus       214 ~~~~~~~~~~~~~~dva~~~~~ai~~~  240 (275)
T PRK05876        214 PGPLPLQDDNLGVDDIAQLTADAILAN  240 (275)
T ss_pred             cccccccccCCCHHHHHHHHHHHHHcC
Confidence            00 122457899999999999999754

>PRK06128 oxidoreductase; Provisional

Probab=99.92  E-value=2.8e-23  Score=175.29  Aligned_cols=222  Identities=11%  Similarity=0.095  Sum_probs=155.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|++|||||+|+||+++++.|+++|++|++..++..     ..........+...+.++.++.+|++|.+++.++++   
T Consensus        55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEE-----EQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcc-----hHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999988877541     101111111111123467889999999988877765   


Q ss_pred             ----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 ----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 ----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                          .+|+|||+||....      ...+.++..+++|+.++.++++++.+. ..-++||++||..++...          
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~----------  199 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS----------  199 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC----------
Confidence                47999999997432      112234588999999999999998754 113699999998765332          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  +....|+.||.+.+.+++.++.+   .|+++++++||.+.+|......  ........ .+...++  
T Consensus       200 ------------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~--~~~~~~~~-~~~~~p~--  262 (300)
T PRK06128        200 ------------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGG--QPPEKIPD-FGSETPM--  262 (300)
T ss_pred             ------------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCC--CCHHHHHH-HhcCCCC--
Confidence                        22346999999999999988876   4899999999999998643211  01111111 1122222  


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                         ..+..++|+|.++++++.....  .| .++++++
T Consensus       263 ---~r~~~p~dva~~~~~l~s~~~~~~~G~~~~v~gg  296 (300)
T PRK06128        263 ---KRPGQPVEMAPLYVLLASQESSYVTGEVFGVTGG  296 (300)
T ss_pred             ---CCCcCHHHHHHHHHHHhCccccCccCcEEeeCCC
Confidence               2678999999999999875432  24 4666554

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-23  Score=174.12  Aligned_cols=213  Identities=18%  Similarity=0.161  Sum_probs=150.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |-.++|+|+||||||+||++++++|+++|++|++++|++        +.... ..++.....++.++.+|++|.+++..+
T Consensus         1 ~~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (258)
T PRK07890          1 MLLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTA--------ERLDEVAAEIDDLGRRALAVPTDITDEDQCANL   72 (258)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHHhCCceEEEecCCCCHHHHHHH
Confidence            344578999999999999999999999999999999976        22211 122211234688999999999988776


Q ss_pred             hc-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCC
Q 023244           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      ++       .+|+|||+|+....      ...+.....+++|+.++..+++++.+.  +..++||++||.....+.    
T Consensus        73 ~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~----  148 (258)
T PRK07890         73 VALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQ----  148 (258)
T ss_pred             HHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCC----
Confidence            64       47999999987432      112233588999999999999998753  113589999998654222    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc-------cHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG-------SVRSS  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~-------~~~~~  214 (285)
                                        ++...|+.+|.+.+.+++.++.+.   +++++++|||.+++|........       .....
T Consensus       149 ------------------~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~  210 (258)
T PRK07890        149 ------------------PKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQI  210 (258)
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHH
Confidence                              234569999999999999988664   89999999999999853221100       00111


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      ...... ..+     ...+.+++|+++++.+++..
T Consensus       211 ~~~~~~-~~~-----~~~~~~~~dva~a~~~l~~~  239 (258)
T PRK07890        211 YAETAA-NSD-----LKRLPTDDEVASAVLFLASD  239 (258)
T ss_pred             HHHHhh-cCC-----ccccCCHHHHHHHHHHHcCH
Confidence            111111 111     12578999999999999974

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.92  E-value=4.6e-23  Score=169.14  Aligned_cols=223  Identities=17%  Similarity=0.167  Sum_probs=152.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+|+++||||||+||++++++|+++|++|+++.|+..     . ..............++.++.+|+++.+.+.+++
T Consensus         1 ~~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (248)
T PRK05557          1 MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE-----A-GAEALVAEIGALGGKALAVQGDVSDAESVERAV   74 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch-----h-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            5556789999999999999999999999999988888761     0 011111111122347888999999999887776


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCc
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +       .+|+|||+|+.....     ..+.....++.|+.++.++++++...   ...++||++||....++.     
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~-----  149 (248)
T PRK05557         75 DEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGN-----  149 (248)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCC-----
Confidence            5       479999999975531     11223467889999999998888653   125789999998654332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|.+.+.+++.++++   .+++++++|||.+.++......    .......... 
T Consensus       150 -----------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~----~~~~~~~~~~-  207 (248)
T PRK05557        150 -----------------PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALP----EDVKEAILAQ-  207 (248)
T ss_pred             -----------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccC----hHHHHHHHhc-
Confidence                             12356999999999888877654   3799999999998765432211    1111111111 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP--DAKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~-~~~~~~~  261 (285)
                      .+     ...+++++|+++++.+++...  ...| .+++.++
T Consensus       208 ~~-----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~i~~~  244 (248)
T PRK05557        208 IP-----LGRLGQPEEIASAVAFLASDEAAYITGQTLHVNGG  244 (248)
T ss_pred             CC-----CCCCcCHHHHHHHHHHHcCcccCCccccEEEecCC
Confidence            11     125789999999999988652  2234 4566543

>PRK05717 oxidoreductase; Validated

Probab=99.92  E-value=4.9e-23  Score=169.90  Aligned_cols=205  Identities=17%  Similarity=0.096  Sum_probs=147.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||+++++.|+++|++|++++|+.        ..... ....   ..++.++.+|++|.+++.++++ 
T Consensus         9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~--------~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   77 (255)
T PRK05717          9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDR--------ERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAE   77 (255)
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHH
Confidence            458999999999999999999999999999998875        22221 1222   2367889999999988766554 


Q ss_pred             ------CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....       ..+..+..+++|+.++.++++++.+.  ...+++|++||...+.+.      
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~------  151 (255)
T PRK05717         78 VLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSE------  151 (255)
T ss_pred             HHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCC------
Confidence                  379999999975431       11223478999999999999998642  113689999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                      +....|+.+|.+.+.+++.+++++  ++++++++||.+.++.......   .......... .+
T Consensus       152 ----------------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~---~~~~~~~~~~-~~  211 (255)
T PRK05717        152 ----------------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRA---EPLSEADHAQ-HP  211 (255)
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccc---hHHHHHHhhc-CC
Confidence                            123569999999999999998875  5999999999999975322111   1111111111 11


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                           ...+.+++|++.++.+++...
T Consensus       212 -----~~~~~~~~~va~~~~~l~~~~  232 (255)
T PRK05717        212 -----AGRVGTVEDVAAMVAWLLSRQ  232 (255)
T ss_pred             -----CCCCcCHHHHHHHHHHHcCch
Confidence                 125789999999999998654

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=99.92  E-value=2e-23  Score=179.20  Aligned_cols=264  Identities=22%  Similarity=0.307  Sum_probs=182.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC---CeEEEEecCCCCccccCccchhhhh-------------cCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLK-------------NLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~   67 (285)
                      .+|+|+|||||||+|.-+++.|+...   .+++++.|..     ...+...++.             ..+...+++..+.
T Consensus        11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k-----~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~   85 (467)
T KOG1221|consen   11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAK-----KGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA   85 (467)
T ss_pred             CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecC-----CCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence            46899999999999999999999763   2678888865     2222222221             2223347899999


Q ss_pred             cCCCCh------hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccC
Q 023244           68 ADLSHP------DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        68 ~Dl~d~------~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ||++++      .+++.+.+++|+|||+||...++  ++.+....+|..|++++++.|++....+-+||+||+.+.  ..
T Consensus        86 GDi~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd--e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n--~~  161 (467)
T KOG1221|consen   86 GDISEPDLGISESDLRTLADEVNIVIHSAATVRFD--EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSN--CN  161 (467)
T ss_pred             ccccCcccCCChHHHHHHHhcCCEEEEeeeeeccc--hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhhee--cc
Confidence            999876      45667778899999999998885  455688899999999999999999779999999998754  21


Q ss_pred             CCCcccccCCC-----------------Cchhhh-----hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCcee
Q 023244          142 KDVDMMDETFW-----------------SDVDYI-----RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVV  199 (285)
Q Consensus       142 ~~~~~~~e~~~-----------------~~~~~~-----~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~  199 (285)
                        ...+.|...                 .+.+..     .-...+++.|.-+|+++|.++...+  .++|.+|+||+.|.
T Consensus       162 --~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~  237 (467)
T KOG1221|consen  162 --VGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIIT  237 (467)
T ss_pred             --cccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCcee
Confidence              111111111                 111111     1123467889999999999998865  47999999999998


Q ss_pred             cCCCCCCCCccHHH-------HHHHHhcCccccc--cccCcceeeHHHHHHHHHHhhcC--CCC----CceEEEec---c
Q 023244          200 GPFICPKFAGSVRS-------SLALILGNREEYG--FLLNTSMVHVDDVARAHIFLLEY--PDA----KGRYICSS---H  261 (285)
Q Consensus       200 g~~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~i~~~D~a~~~~~~~~~--~~~----~~~~~~~~---~  261 (285)
                      .....+. +++...       +...-+|.-..+.  .++..++|++|.++++++.+...  ...    ..+||+++   .
T Consensus       238 st~~EP~-pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~N  316 (467)
T KOG1221|consen  238 STYKEPF-PGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDN  316 (467)
T ss_pred             ccccCCC-CCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccC
Confidence            7654432 222211       1111122222222  26788999999999999876621  111    23788654   3


Q ss_pred             ccCHHHHHHHHHhhCCCCCC
Q 023244          262 TLTIQEMAEFLSAKYPEYPI  281 (285)
Q Consensus       262 ~~s~~e~~~~i~~~~~~~~~  281 (285)
                      +++|.++.+...+...+.|+
T Consensus       317 p~t~~~~~e~~~~~~~~~Pl  336 (467)
T KOG1221|consen  317 PVTWGDFIELALRYFEKIPL  336 (467)
T ss_pred             cccHHHHHHHHHHhcccCCc
Confidence            79999999999998765443

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.5e-23  Score=171.60  Aligned_cols=219  Identities=22%  Similarity=0.229  Sum_probs=150.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +....+. ....  .++.++.+|++|++.+.++++ 
T Consensus        10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   79 (264)
T PRK12829         10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSE--------AALAATAARLPG--AKVTATVADVADPAQVERVFDT   79 (264)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhc--CceEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        2222222 1211  157889999999998877765 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCc-cEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTV-KRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~  144 (285)
                            ++|+|||+|+....      ...+..+..+++|+.++.++++++.+    .+ . ++|+++||.....+.    
T Consensus        80 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~~vv~~ss~~~~~~~----  154 (264)
T PRK12829         80 AVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASG-HGGVIIALSSVAGRLGY----  154 (264)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCeEEEEecccccccCC----
Confidence                  57999999997622      11122358899999999998888743    33 3 678888886543222    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc-------cHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG-------SVRSS  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~-------~~~~~  214 (285)
                                        +....|+.+|.+.|.+++.++++.   +++++++|||.++||........       .....
T Consensus       155 ------------------~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~  216 (264)
T PRK12829        155 ------------------PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEM  216 (264)
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHH
Confidence                              123469999999999998887654   89999999999999863221110       00000


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP--DAKG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~~~-~~~~~~~  261 (285)
                      ..... ..     .....+++++|+|+++..++...  ...| .|+++++
T Consensus       217 ~~~~~-~~-----~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g  260 (264)
T PRK12829        217 EQEYL-EK-----ISLGRMVEPEDIAATALFLASPAARYITGQAISVDGN  260 (264)
T ss_pred             HHHHH-hc-----CCCCCCCCHHHHHHHHHHHcCccccCccCcEEEeCCC
Confidence            00000 00     11236899999999999988642  2234 4566553

>PLN02253 xanthoxin dehydrogenase

Probab=99.92  E-value=7.3e-23  Score=171.18  Aligned_cols=222  Identities=18%  Similarity=0.124  Sum_probs=152.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++. ...++.++.+|++|.+++.++++ 
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~--------~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   87 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQD--------DLGQNVCDSLG-GEPNVCFFHCDVTVEDDVSRAVDF   87 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHhc-CCCceEEEEeecCCHHHHHHHHHH
Confidence            357899999999999999999999999999999875        22211 12221 13468899999999998888776 


Q ss_pred             ------CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||.....       ..+..+.++++|+.++.++++++.+.   ...+++|++||.....+.     
T Consensus        88 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-----  162 (280)
T PLN02253         88 TVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGG-----  162 (280)
T ss_pred             HHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccC-----
Confidence                  489999999975321       11223588999999999988877542   114689999987754332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc------cHHHHHH
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG------SVRSSLA  216 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~------~~~~~~~  216 (285)
                                       +....|+.+|.+.|.+++.++.+.   |+++++++||.+.++......+.      .+..+..
T Consensus       163 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~  225 (280)
T PLN02253        163 -----------------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRA  225 (280)
T ss_pred             -----------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHH
Confidence                             122469999999999999988774   79999999999988743211111      1111111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .... ...+    ....++++|+|+++.+++.....  .| .+.+.++
T Consensus       226 ~~~~-~~~l----~~~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG  268 (280)
T PLN02253        226 FAGK-NANL----KGVELTVDDVANAVLFLASDEARYISGLNLMIDGG  268 (280)
T ss_pred             Hhhc-CCCC----cCCCCCHHHHHHHHHhhcCcccccccCcEEEECCc
Confidence            1111 1111    12357899999999999875432  34 3455543

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.92  E-value=7.2e-23  Score=171.78  Aligned_cols=220  Identities=15%  Similarity=0.126  Sum_probs=155.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +....+ ..+...+.++.++.+|++|.+.+.++++ 
T Consensus        45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~  117 (290)
T PRK06701         45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH-------EDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEE  117 (290)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-------hHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            4579999999999999999999999999999998751       111111 1111123468889999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+|+.....      ..+.....+++|+.++.++++++.+. ...+++|++||..++.+.        
T Consensus       118 i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~--------  189 (290)
T PRK06701        118 TVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN--------  189 (290)
T ss_pred             HHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC--------
Confidence                  479999999975321      11223578999999999999998764 213689999998765433        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.+|.+.+.+++.++.++   |++++.++||.++++.......   ....... ....+ 
T Consensus       190 --------------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~---~~~~~~~-~~~~~-  250 (290)
T PRK06701        190 --------------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD---EEKVSQF-GSNTP-  250 (290)
T ss_pred             --------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC---HHHHHHH-HhcCC-
Confidence                          122459999999999999998774   8999999999999875332111   1111111 11112 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       251 ----~~~~~~~~dva~~~~~ll~~~~~~~~G~~i~idgg  285 (290)
T PRK06701        251 ----MQRPGQPEELAPAYVFLASPDSSYITGQMLHVNGG  285 (290)
T ss_pred             ----cCCCcCHHHHHHHHHHHcCcccCCccCcEEEeCCC
Confidence                2368999999999999998643  234 3455443

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.9e-23  Score=169.43  Aligned_cols=215  Identities=20%  Similarity=0.249  Sum_probs=153.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||+++++.|+++|++|++++|+.        +....+....    +..++.+|++|.+.+.++++   
T Consensus         9 ~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~   76 (245)
T PRK07060          9 GKSVLVTGASSGIGRACAVALAQRGARVVAAARNA--------AALDRLAGET----GCEPLRLDVGDDAAIRAALAAAG   76 (245)
T ss_pred             CCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh----CCeEEEecCCCHHHHHHHHHHhC
Confidence            47999999999999999999999999999999976        3333322211    35678899999998888876   


Q ss_pred             CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           82 GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        82 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                      .+|+|||+|+.....     ..+..+..++.|+.++.++++++.+.    +..++||++||...+++.            
T Consensus        77 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------  144 (245)
T PRK07060         77 AFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------  144 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------
Confidence            379999999975431     11223467889999999999888653    213689999998765433            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL  229 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                +....|+.+|.+.|.+++.++.+   .+++++.+|||.++++...........  .......      ..
T Consensus       145 ----------~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~--~~~~~~~------~~  206 (245)
T PRK07060        145 ----------PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQK--SGPMLAA------IP  206 (245)
T ss_pred             ----------CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHH--HHHHHhc------CC
Confidence                      22356999999999999988865   379999999999999864321111111  0111111      11


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      ...|++++|+++++.+++..+..  .|. +++.++
T Consensus       207 ~~~~~~~~d~a~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK07060        207 LGRFAEVDDVAAPILFLLSDAASMVSGVSLPVDGG  241 (245)
T ss_pred             CCCCCCHHHHHHHHHHHcCcccCCccCcEEeECCC
Confidence            23689999999999999976532  344 455543

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.92  E-value=4.4e-23  Score=169.66  Aligned_cols=221  Identities=19%  Similarity=0.198  Sum_probs=153.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +....+. +......++.++.+|++|.++++++++ 
T Consensus         2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   73 (250)
T TIGR03206         2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNR--------EAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAA   73 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            368999999999999999999999999999999876        2222211 111123468899999999998888765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+++.....     ..+..+..+++|+.++.++++++.    +.+ .+++|++||..++...      
T Consensus        74 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~------  146 (250)
T TIGR03206        74 AEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGS------  146 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCC------
Confidence                  479999999874331     112224679999999999888775    344 6799999998765433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc--cHHHHHHHHhcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG--SVRSSLALILGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~--~~~~~~~~~~~~  221 (285)
                                      +....|+.+|++.+.+++.++.+.   +++++++|||.++++........  ........+...
T Consensus       147 ----------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (250)
T TIGR03206       147 ----------------SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRA  210 (250)
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhc
Confidence                            223569999999999888887664   89999999999998853221100  000111111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                       .+.     ..+..++|+|+++.+++.....  .| .++++++
T Consensus       211 -~~~-----~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~g  247 (250)
T TIGR03206       211 -IPL-----GRLGQPDDLPGAILFFSSDDASFITGQVLSVSGG  247 (250)
T ss_pred             -CCc-----cCCcCHHHHHHHHHHHcCcccCCCcCcEEEeCCC
Confidence             111     1467899999999999876432  24 4555543

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.92  E-value=5e-23  Score=169.11  Aligned_cols=218  Identities=17%  Similarity=0.144  Sum_probs=154.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|+|+||||+|+||++++++|+++|++|++++|+..      .+....+...   ..++.++.+|+++.+++..++
T Consensus         1 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~   71 (248)
T TIGR01832         1 FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP------SETQQQVEAL---GRRFLSLTADLSDIEAIKALV   71 (248)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH------HHHHHHHHhc---CCceEEEECCCCCHHHHHHHH
Confidence            3446789999999999999999999999999999998651      1112222222   346889999999999887766


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|++||+||.....     ..+..+..+++|+.++.++++++.+.    +..+++|++||..++.+.    
T Consensus        72 ~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----  147 (248)
T TIGR01832        72 DSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG----  147 (248)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC----
Confidence            4       479999999985431     11233577899999999999887542    214689999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.+|.+.+.+++.+++++   |+++++++||.+.++........ ... .......
T Consensus       148 ------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~-~~~~~~~  207 (248)
T TIGR01832       148 ------------------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRAD-EDR-NAAILER  207 (248)
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccC-hHH-HHHHHhc
Confidence                              123469999999999999998874   89999999999988753221111 000 0111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--CceEE
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRYI  257 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~  257 (285)
                       .+     ...|+.++|+|+++++++.....  .|.++
T Consensus       208 -~~-----~~~~~~~~dva~~~~~l~s~~~~~~~G~~i  239 (248)
T TIGR01832       208 -IP-----AGRWGTPDDIGGPAVFLASSASDYVNGYTL  239 (248)
T ss_pred             -CC-----CCCCcCHHHHHHHHHHHcCccccCcCCcEE
Confidence             11     23789999999999999975432  35543

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.91  E-value=3.7e-23  Score=171.02  Aligned_cols=219  Identities=12%  Similarity=0.082  Sum_probs=150.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC--CCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG--ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +|+|+||||+|+||++++++|+++|++|++++|+.        .....+. .+..  ...++.++.+|++|.+++..+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   73 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINS--------EKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSR   73 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHH
Confidence            57899999999999999999999999999999876        2211111 1100  11368899999999988877664


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+...++|++||.....+.     
T Consensus        74 ~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~-----  148 (259)
T PRK12384         74 GVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGS-----  148 (259)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCC-----
Confidence                   469999999875431     1122357789999998877777654    2313589999997643222     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHH-----
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-----  217 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-----  217 (285)
                                       +....|+.||++.+.+++.++.+   .|++++++|||.++++.....   .+..+...     
T Consensus       149 -----------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~---~~~~~~~~~~~~~  208 (259)
T PRK12384        149 -----------------KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQS---LLPQYAKKLGIKP  208 (259)
T ss_pred             -----------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhh---hhHHHHHhcCCCh
Confidence                             12356999999998888888754   589999999999887643221   11111100     


Q ss_pred             -----HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          218 -----ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       218 -----~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                           ......     ..+.+++++|++.++++++.+...  .| .|+++++
T Consensus       209 ~~~~~~~~~~~-----~~~~~~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g  255 (259)
T PRK12384        209 DEVEQYYIDKV-----PLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGG  255 (259)
T ss_pred             HHHHHHHHHhC-----cccCCCCHHHHHHHHHHHcCcccccccCceEEEcCC
Confidence                 001111     234789999999999999875432  24 4777654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.91  E-value=5.9e-23  Score=168.88  Aligned_cols=219  Identities=17%  Similarity=0.132  Sum_probs=150.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||+|+||++++++|+++|++|+++ .|+.        ..... .++....+.++.++.+|++|++++..+++ 
T Consensus         4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   75 (250)
T PRK08063          4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSR--------KAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQ   75 (250)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            5799999999999999999999999998774 5654        11111 11111123468889999999998888776 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+|+.....     ..+.....+++|+.++.++++++.+.   ...++||++||.......       
T Consensus        76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-------  148 (250)
T PRK08063         76 IDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYL-------  148 (250)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCC-------
Confidence                  379999999875431     11222356789999999988887653   125699999997654221       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.|.+++.++.+   .|+++++++||.+.++..... ..... ........ .+
T Consensus       149 ---------------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~-~~~~~-~~~~~~~~-~~  210 (250)
T PRK08063        149 ---------------ENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHF-PNREE-LLEDARAK-TP  210 (250)
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhc-cCchH-HHHHHhcC-CC
Confidence                           23457999999999999988765   489999999999987653221 11111 11111111 11


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .     ..+++++|+|+++.+++.++..  .| .+++.++
T Consensus       211 ~-----~~~~~~~dva~~~~~~~~~~~~~~~g~~~~~~gg  245 (250)
T PRK08063        211 A-----GRMVEPEDVANAVLFLCSPEADMIRGQTIIVDGG  245 (250)
T ss_pred             C-----CCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            1     2579999999999999976532  34 4555554

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.91  E-value=8.5e-23  Score=167.76  Aligned_cols=208  Identities=19%  Similarity=0.172  Sum_probs=148.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|...    .+.+....+ .+......++.++.+|++|.+.+.++++ 
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (249)
T PRK12827          5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPM----RGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDA   80 (249)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccc----ccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            4589999999999999999999999999999887541    111111111 1121223478899999999998887764 


Q ss_pred             ------CCCEEEEecccCCC---C--CCChHHHHHHHHHHHHHHHHHHHH-----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCL-----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|.|||+||....   .  ..+.....+++|+.++.++++++.     +.+ .+++|++||...+.+.     
T Consensus        81 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----  154 (249)
T PRK12827         81 GVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGN-----  154 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCC-----
Confidence                  47999999998653   1  112234778999999999999987     334 6799999998765432     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.+|.+.+.+++.++.+   .+++++++|||.+.++.......  ....   ...  
T Consensus       155 -----------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~--~~~~---~~~--  210 (249)
T PRK12827        155 -----------------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP--TEHL---LNP--  210 (249)
T ss_pred             -----------------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch--HHHH---Hhh--
Confidence                             23456999999999998888765   38999999999999985433211  0111   111  


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .++     ..+.+++|+++++.+++...
T Consensus       211 ~~~-----~~~~~~~~va~~~~~l~~~~  233 (249)
T PRK12827        211 VPV-----QRLGEPDEVAALVAFLVSDA  233 (249)
T ss_pred             CCC-----cCCcCHHHHHHHHHHHcCcc
Confidence            111     13568999999999999654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.4e-23  Score=170.38  Aligned_cols=195  Identities=18%  Similarity=0.169  Sum_probs=144.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      +|+|+||||||+||++++++|+++|++|++++|+.        +....+ .+..... ++.++.+|++|.+++.++++. 
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~   72 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRT--------DALQAFAARLPKAA-RVSVYAADVRDADALAAAAADF   72 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHH
Confidence            47999999999999999999999999999999976        222222 2222212 788999999999988887653 


Q ss_pred             ------CCEEEEecccCCCC---C-C--ChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           83 ------CTGVLHVATPVDFE---D-K--EPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 ------~d~vih~a~~~~~~---~-~--~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            +|++||+||.....   . .  +..+..+++|+.++.++++    ++++.+ .++||++||...+.+.      
T Consensus        73 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~------  145 (257)
T PRK07024         73 IAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGL------  145 (257)
T ss_pred             HHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC------
Confidence                  69999999975431   1 1  2235789999999988776    445555 6799999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.||.+.+.+++.++.+   .|++++++|||.+.++.....               ..
T Consensus       146 ----------------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---------------~~  194 (257)
T PRK07024        146 ----------------PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN---------------PY  194 (257)
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC---------------CC
Confidence                            22346999999999999887644   489999999999988742110               00


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ..+     .++.++|+++.+..++.++.
T Consensus       195 ~~~-----~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        195 PMP-----FLMDADRFAARAARAIARGR  217 (257)
T ss_pred             CCC-----CccCHHHHHHHHHHHHhCCC
Confidence            001     24689999999999998653

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.7e-23  Score=166.07  Aligned_cols=204  Identities=20%  Similarity=0.164  Sum_probs=144.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||+++++.|+++ ++|++++|+.        +....+...   ...++++.+|++|.+++.++++   
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~--------~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   70 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPA--------ERLDELAAE---LPGATPFPVDLTDPEAIAAAVEQLG   70 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCH--------HHHHHHHHH---hccceEEecCCCCHHHHHHHHHhcC
Confidence            578999999999999999999999 9999999976        222222211   1257889999999999999887   


Q ss_pred             CCCEEEEecccCCCCC-----CChHHHHHHHHHHHHH----HHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           82 GCTGVLHVATPVDFED-----KEPEEVITQRAINGTL----GILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~~~----~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                      ++|+|||+++......     .+.....++.|+.+..    ++++++++.+  +++|++||..++...            
T Consensus        71 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--~~~v~~ss~~~~~~~------------  136 (227)
T PRK08219         71 RLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAH--GHVVFINSGAGLRAN------------  136 (227)
T ss_pred             CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC--CeEEEEcchHhcCcC------------
Confidence            4899999999754321     1122456888888844    4455455444  799999998765332            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-C-CcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-G-LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~-i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                                ++...|+.+|...+.+++.++.+. + +++..++||.+.++.....        .. ..+..  +   ..
T Consensus       137 ----------~~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~--------~~-~~~~~--~---~~  192 (227)
T PRK08219        137 ----------PGWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGL--------VA-QEGGE--Y---DP  192 (227)
T ss_pred             ----------CCCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhh--------hh-hhccc--c---CC
Confidence                      223569999999999888876543 5 8999999998766532110        00 01111  1   12


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEE
Q 023244          231 TSMVHVDDVARAHIFLLEYPDAKGRYIC  258 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~  258 (285)
                      ..+++++|++++++++++.+..+.++++
T Consensus       193 ~~~~~~~dva~~~~~~l~~~~~~~~~~~  220 (227)
T PRK08219        193 ERYLRPETVAKAVRFAVDAPPDAHITEV  220 (227)
T ss_pred             CCCCCHHHHHHHHHHHHcCCCCCccceE
Confidence            3689999999999999987755455654

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.5e-23  Score=167.39  Aligned_cols=208  Identities=22%  Similarity=0.236  Sum_probs=149.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||||+||+.++++|+++|++|++++|+..       +....+.++.  ...+.++.+|+.|.+++.++++  
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   76 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAA-------PLSQTLPGVP--ADALRIGGIDLVDPQAARRAVDEV   76 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChH-------hHHHHHHHHh--hcCceEEEeecCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999761       1111122221  1256778899999998887775  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+++.....     ..+.....++.|+.++.++++++.+    .+ .+++|++||...+...       
T Consensus        77 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  148 (239)
T PRK12828         77 NRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAG-------  148 (239)
T ss_pred             HHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCC-------
Confidence                 479999999875431     1122246688999999998888753    34 7899999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.+.+++.+++.   .+++++++|||.++++......+             .  
T Consensus       149 ---------------~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~-------------~--  198 (239)
T PRK12828        149 ---------------PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMP-------------D--  198 (239)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCC-------------c--
Confidence                           22356999999999888877654   48999999999999874211100             0  


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                         .....|++++|+|.++.+++.+...  .|. +++.++
T Consensus       199 ---~~~~~~~~~~dva~~~~~~l~~~~~~~~g~~~~~~g~  235 (239)
T PRK12828        199 ---ADFSRWVTPEQIAAVIAFLLSDEAQAITGASIPVDGG  235 (239)
T ss_pred             ---hhhhcCCCHHHHHHHHHHHhCcccccccceEEEecCC
Confidence               0112489999999999999986532  354 455543

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.6e-22  Score=166.90  Aligned_cols=218  Identities=17%  Similarity=0.136  Sum_probs=148.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||+++++.|+++|++|+++.++..       +....+...     ++.++.+|++|.+++.++++  
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~l~~~-----~~~~~~~Dl~~~~~~~~~~~~~   73 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE-------NEAKELREK-----GVFTIKCDVGNRDQVKKSKEVV   73 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH-------HHHHHHHhC-----CCeEEEecCCCHHHHHHHHHHH
Confidence            3589999999999999999999999999998877541       222223221     47788999999998888765  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||....     ...+..+..+++|+.++..+    ++.+++.+ .+++|++||..++...       
T Consensus        74 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~-------  145 (255)
T PRK06463         74 EKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTA-------  145 (255)
T ss_pred             HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCC-------
Confidence                 47999999987542     11222357889999996555    44444444 5799999998764321       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC-CccHHHHHHHHhcCcc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-AGSVRSSLALILGNRE  223 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~  223 (285)
                                    .+....|+.||.+.+.+++.++.+   .|+++++++||.+-.+...... ............. ..
T Consensus       146 --------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~  210 (255)
T PRK06463        146 --------------AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRN-KT  210 (255)
T ss_pred             --------------CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHh-CC
Confidence                          022356999999999999998866   4899999999999776432111 1111111111111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      ++     ..+..++|+++++++++.....  .|. +.+.++
T Consensus       211 ~~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~~~~dgg  246 (255)
T PRK06463        211 VL-----KTTGKPEDIANIVLFLASDDARYITGQVIVADGG  246 (255)
T ss_pred             Cc-----CCCcCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            22     2578899999999999975432  343 455554

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.91  E-value=7.1e-23  Score=168.20  Aligned_cols=219  Identities=16%  Similarity=0.149  Sum_probs=149.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +++++||||+|+||++++++|+++|++|+++.++.+       +.... ...+...+.++.++.+|++|.+++.++++  
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNR-------DAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAV   74 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCH-------HHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHH
Confidence            468999999999999999999999999887765431       11111 11111123367889999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCC
Q 023244           82 -----GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                           .+|+|||+|+.....      ..+..+..+++|+.++.++++++.+.      +..+++|++||..+..+.+   
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---  151 (248)
T PRK06123         75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP---  151 (248)
T ss_pred             HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC---
Confidence                 479999999975431      11223478999999999988887543      1124799999987654331   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .....|+.+|.+.|.+++.++.+.   |++++++||+.++||......   .......... 
T Consensus       152 ------------------~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~---~~~~~~~~~~-  209 (248)
T PRK06123        152 ------------------GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG---EPGRVDRVKA-  209 (248)
T ss_pred             ------------------CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC---CHHHHHHHHh-
Confidence                              011349999999999999888764   899999999999998533211   1111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSS  260 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~  260 (285)
                      ..++.     .+.+++|+++++.+++....  ..| .|++.+
T Consensus       210 ~~p~~-----~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~g  246 (248)
T PRK06123        210 GIPMG-----RGGTAEEVARAILWLLSDEASYTTGTFIDVSG  246 (248)
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHhCccccCccCCEEeecC
Confidence            11222     34689999999999987543  233 466544

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.91  E-value=6.8e-23  Score=168.74  Aligned_cols=202  Identities=15%  Similarity=0.095  Sum_probs=147.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      .+|++|||||+|+||+.++++|+++|++|++++|+.             ..   ....++.++.+|++|.+++.+++++ 
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-------------~~---~~~~~~~~~~~D~~~~~~~~~~~~~~   70 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-------------LT---QEDYPFATFVLDVSDAAAVAQVCQRL   70 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-------------hh---hcCCceEEEEecCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999865             00   1123678899999999988887763 


Q ss_pred             ------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            +|+|||+++.....     ..+.....+++|+.++.++++++.+    .+ .+++|++||.......       
T Consensus        71 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~-------  142 (252)
T PRK08220         71 LAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPR-------  142 (252)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCC-------
Confidence                  79999999976541     1123357899999999999988753    33 5689999997643221       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc------HHHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS------VRSSLALI  218 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~------~~~~~~~~  218 (285)
                                     ++...|+.+|.+.+.+++.++.+   +|+++++++||.++++.........      ........
T Consensus       143 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (252)
T PRK08220        143 ---------------IGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQF  207 (252)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHH
Confidence                           23456999999999999888876   5899999999999998532211100      00000111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      . ...+     ...+++++|+|+++++++...
T Consensus       208 ~-~~~~-----~~~~~~~~dva~~~~~l~~~~  233 (252)
T PRK08220        208 K-LGIP-----LGKIARPQEIANAVLFLASDL  233 (252)
T ss_pred             h-hcCC-----CcccCCHHHHHHHHHHHhcch
Confidence            1 1111     236899999999999999754

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=99.91  E-value=2.4e-23  Score=164.71  Aligned_cols=227  Identities=19%  Similarity=0.172  Sum_probs=171.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +-.+-|.|||||+|+++|.+|.+.|.+|++..|..+       ..-.+++-.. .-..+-++..|+.|++++++.++...
T Consensus        61 GiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~-------~~~r~lkvmG-dLGQvl~~~fd~~DedSIr~vvk~sN  132 (391)
T KOG2865|consen   61 GIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDE-------YDPRHLKVMG-DLGQVLFMKFDLRDEDSIRAVVKHSN  132 (391)
T ss_pred             ceEEEEecccccccHHHHHHHhhcCCeEEEeccCCc-------cchhheeecc-cccceeeeccCCCCHHHHHHHHHhCc
Confidence            346789999999999999999999999999999662       2333333221 22478899999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+.|---.  .... .+.++|+.+...|++.|++.| +.|||++|+..+-.                        ..
T Consensus       133 VVINLIGrd~e--Tknf-~f~Dvn~~~aerlAricke~G-VerfIhvS~Lganv------------------------~s  184 (391)
T KOG2865|consen  133 VVINLIGRDYE--TKNF-SFEDVNVHIAERLARICKEAG-VERFIHVSCLGANV------------------------KS  184 (391)
T ss_pred             EEEEeeccccc--cCCc-ccccccchHHHHHHHHHHhhC-hhheeehhhccccc------------------------cC
Confidence            99999985322  1222 778899999999999999999 99999999876310                        12


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHh--cCcccccc--ccCcceeeHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL--GNREEYGF--LLNTSMVHVDDVA  240 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~i~~~D~a  240 (285)
                      .+-|-.+|.+.|..+++.-    =..+|+||+.+||..+     +++..+.....  +--+.+..  ......+++-|+|
T Consensus       185 ~Sr~LrsK~~gE~aVrdaf----PeAtIirPa~iyG~eD-----rfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVa  255 (391)
T KOG2865|consen  185 PSRMLRSKAAGEEAVRDAF----PEATIIRPADIYGTED-----RFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVA  255 (391)
T ss_pred             hHHHHHhhhhhHHHHHhhC----Ccceeechhhhcccch-----hHHHHHHHHHHhcCceeeecCCcceeeccEEEehHH
Confidence            2559999999999998754    3479999999999742     23322222111  11122221  3456889999999


Q ss_pred             HHHHHhhcCCCCCc-eEE-EeccccCHHHHHHHHHhhC
Q 023244          241 RAHIFLLEYPDAKG-RYI-CSSHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       241 ~~~~~~~~~~~~~~-~~~-~~~~~~s~~e~~~~i~~~~  276 (285)
                      .+++.++.++++.| +|- ++++.+.+.|+++.|.+..
T Consensus       256 a~IvnAvkDp~s~Gktye~vGP~~yql~eLvd~my~~~  293 (391)
T KOG2865|consen  256 AAIVNAVKDPDSMGKTYEFVGPDRYQLSELVDIMYDMA  293 (391)
T ss_pred             HHHHHhccCccccCceeeecCCchhhHHHHHHHHHHHH
Confidence            99999999998877 575 6678899999888877643

>PRK06194 hypothetical protein; Provisional

Probab=99.91  E-value=4.3e-23  Score=173.18  Aligned_cols=168  Identities=13%  Similarity=0.050  Sum_probs=125.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +... ...++...+.++.++.+|++|.+++.++++ 
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~   76 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQ--------DALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADA   76 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999976        2221 112221123468889999999999988876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCC-----ccEEEEeccceeeeccC
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGT-----VKRVVYTSSNAAVFYND  141 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~-----~~~~v~~SS~~~~~~~~  141 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.+++++    +.+.+.     .+++|++||..++... 
T Consensus        77 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-  155 (287)
T PRK06194         77 ALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAP-  155 (287)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC-
Confidence                  379999999986541     1122346789999999987777    444441     1589999998765432 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecC
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGP  201 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~  201 (285)
                                           ++...|+.+|.+.+.+++.++.++     ++++..+.||.+.++
T Consensus       156 ---------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~  199 (287)
T PRK06194        156 ---------------------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTG  199 (287)
T ss_pred             ---------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCc
Confidence                                 223569999999999999887764     377888889888665

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-22  Score=166.00  Aligned_cols=223  Identities=17%  Similarity=0.202  Sum_probs=153.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+++||||+|+||++++++|+++|++|+++.|+.+      .......+.+...+.++.++.+|++|.+++.+++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   74 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSA------AAADELVAEIEAAGGRAIAVQADVADAAAVTRLF   74 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCH------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence            6667789999999999999999999999999988877641      0111111112122347889999999999888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccc
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      +       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+. ...+++|++||.......       
T Consensus        75 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-------  147 (245)
T PRK12937         75 DAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPL-------  147 (245)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCC-------
Confidence            6       479999999975431     11223577899999999999888654 223689999987643221       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.+.+++.++.++   ++++++++||.+.++.......  .. ....+... .+
T Consensus       148 ---------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~--~~-~~~~~~~~-~~  208 (245)
T PRK12937        148 ---------------PGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKS--AE-QIDQLAGL-AP  208 (245)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCC--HH-HHHHHHhc-CC
Confidence                           234679999999999998887653   7999999999988764221111  11 11111111 12


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEec
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSS  260 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~  260 (285)
                      +.     .+.+++|+++.+.+++..+..  .|. +++++
T Consensus       209 ~~-----~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~  242 (245)
T PRK12937        209 LE-----RLGTPEEIAAAVAFLAGPDGAWVNGQVLRVNG  242 (245)
T ss_pred             CC-----CCCCHHHHHHHHHHHcCccccCccccEEEeCC
Confidence            21     467899999999999975432  243 45543

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=1.7e-22  Score=166.01  Aligned_cols=203  Identities=19%  Similarity=0.248  Sum_probs=143.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc----
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   81 (285)
                      |+|+||||||+||.++++.|+++|++|++++|++        +....+...  .+.++.++.+|++|.+++.++++    
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dl~~~~~i~~~~~~~~~   70 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ--------ERLQELKDE--LGDNLYIAQLDVRNRAAIEEMLASLPA   70 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHH--hccceEEEEecCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999986        333332221  12368889999999988877664    


Q ss_pred             ---CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ---GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                         ++|+|||+||....      ...+..+.++++|+.++..+++.+    ++.+ .+++|++||.......        
T Consensus        71 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~--------  141 (248)
T PRK10538         71 EWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY--------  141 (248)
T ss_pred             HcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCC--------
Confidence               58999999986421      112233578899999966665554    4445 6799999997653221        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC-CCccHHHHHHHHhcCccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGNREE  224 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~  224 (285)
                                    ++...|+.+|.+.+.+.+.++.+.   ++++++++||.+.|+..... ...........       
T Consensus       142 --------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~-------  200 (248)
T PRK10538        142 --------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKT-------  200 (248)
T ss_pred             --------------CCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhh-------
Confidence                          233579999999999998888664   79999999999986642211 11111000000       


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      +   ....++.++|+|+++++++..+.
T Consensus       201 ~---~~~~~~~~~dvA~~~~~l~~~~~  224 (248)
T PRK10538        201 Y---QNTVALTPEDVSEAVWWVATLPA  224 (248)
T ss_pred             c---cccCCCCHHHHHHHHHHHhcCCC
Confidence            0   01146799999999999997654

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.3e-22  Score=165.83  Aligned_cols=215  Identities=19%  Similarity=0.169  Sum_probs=153.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        ..........  ..++..+.+|+++.+++.++++  
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~   83 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSE--------DVAEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAV   83 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhh--CCceEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999976        2222222221  2356789999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+....++++|+.++.++++++.+.    + .++||++||.....+.       
T Consensus        84 ~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  155 (255)
T PRK06841         84 ISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVAL-------  155 (255)
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCC-------
Confidence                 469999999975431     11223468899999999999987643    4 5799999998654332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|.+.+.+++.++.++   |++++.++||.+.++..........   .... ....+
T Consensus       156 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~---~~~~-~~~~~  216 (255)
T PRK06841        156 ---------------ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEK---GERA-KKLIP  216 (255)
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhH---HHHH-HhcCC
Confidence                           223469999999999998888764   8999999999998874322111100   0111 11112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--CceE-EEec
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRY-ICSS  260 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~  260 (285)
                      .     ..+.+++|+++.+++++.....  .|.+ .+++
T Consensus       217 ~-----~~~~~~~~va~~~~~l~~~~~~~~~G~~i~~dg  250 (255)
T PRK06841        217 A-----GRFAYPEEIAAAALFLASDAAAMITGENLVIDG  250 (255)
T ss_pred             C-----CCCcCHHHHHHHHHHHcCccccCccCCEEEECC
Confidence            2     2689999999999999976432  3543 4544

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=165.82  Aligned_cols=209  Identities=20%  Similarity=0.171  Sum_probs=147.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .+.   +.++.++.+|++|.+++..+++ 
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   73 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDP--------ASLEAARAEL---GESALVIRADAGDVAAQKALAQA   73 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999875        222222 122   2367888999999887766554 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.+. ....++|++||....++.         
T Consensus        74 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~---------  144 (249)
T PRK06500         74 LAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGM---------  144 (249)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCC---------
Confidence                  479999999975431     11223578999999999999999753 113578888886544332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC--CCccHHHHHHHHhcCccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNREE  224 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~  224 (285)
                                   +....|+.+|.+.|.+++.++.+.   |++++++|||.+++|.....  ............... .+
T Consensus       145 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~-~~  210 (249)
T PRK06500        145 -------------PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQAL-VP  210 (249)
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhc-CC
Confidence                         223579999999999998887654   89999999999999843211  111111111211111 12


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      +.     .+..++|+|+++.+++....
T Consensus       211 ~~-----~~~~~~~va~~~~~l~~~~~  232 (249)
T PRK06500        211 LG-----RFGTPEEIAKAVLYLASDES  232 (249)
T ss_pred             CC-----CCcCHHHHHHHHHHHcCccc
Confidence            22     46789999999999987543

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=2e-22  Score=166.07  Aligned_cols=209  Identities=16%  Similarity=0.146  Sum_probs=147.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+|+||||+|+||+++++.|+++|++|+++.++..       +....+...  ...++.++.+|++|++++.+++
T Consensus         1 ~~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~-------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~   71 (253)
T PRK08642          1 MQISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE-------DAAEALADE--LGDRAIALQADVTDREQVQAMF   71 (253)
T ss_pred             CCCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH-------HHHHHHHHH--hCCceEEEEcCCCCHHHHHHHH
Confidence            5666789999999999999999999999999988766431       222222111  1236888999999999888777


Q ss_pred             cC--------CCEEEEecccCC---------CC--CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceee
Q 023244           81 AG--------CTGVLHVATPVD---------FE--DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAV  137 (285)
Q Consensus        81 ~~--------~d~vih~a~~~~---------~~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~  137 (285)
                      ++        +|++||+|+...         ..  ..+.....+++|+.++.++++++.+    .+ .+++|++||....
T Consensus        72 ~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~  150 (253)
T PRK08642         72 ATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQ  150 (253)
T ss_pred             HHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCcccc
Confidence            53        899999998531         10  1122347799999999999998853    33 5799999986432


Q ss_pred             eccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHH
Q 023244          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSS  214 (285)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~  214 (285)
                      ..                      ..+...|+.+|.+.|.+++.+++++   |++++.++||.+..+.......   ...
T Consensus       151 ~~----------------------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~---~~~  205 (253)
T PRK08642        151 NP----------------------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP---DEV  205 (253)
T ss_pred             CC----------------------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC---HHH
Confidence            11                      1234579999999999999998774   7999999999998763222111   111


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..... ...++     ..+.+++|+++++.+++...
T Consensus       206 ~~~~~-~~~~~-----~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        206 FDLIA-ATTPL-----RKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             HHHHH-hcCCc-----CCCCCHHHHHHHHHHHcCch
Confidence            11111 12222     26899999999999999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2e-22  Score=165.71  Aligned_cols=207  Identities=21%  Similarity=0.220  Sum_probs=148.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++.....++.++.+|++|.+++.++++  
T Consensus         7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   78 (250)
T PRK12939          7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLA--------AEARELAAALEAAGGRAHAIAADLADPASVQRFFDAA   78 (250)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999999999998876        22221 12221223478899999999998887774  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccceeeeccCCCCcccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                           .+|+|||+++.....     .....+..++.|+.++.++++++.+.-   ..+++|++||...+.+.        
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  150 (250)
T PRK12939         79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA--------  150 (250)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC--------
Confidence                 479999999975431     112235778899999999988875431   14599999997654332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.+|.+.+.+++.++.+   .++++++++||.+.++........   ........ ..+ 
T Consensus       151 --------------~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~-~~~-  211 (250)
T PRK12939        151 --------------PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPAD---ERHAYYLK-GRA-  211 (250)
T ss_pred             --------------CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCCh---HHHHHHHh-cCC-
Confidence                          12346999999999999888765   479999999999987753221110   11111111 112 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                          ...+++++|+|+++++++...
T Consensus       212 ----~~~~~~~~dva~~~~~l~~~~  232 (250)
T PRK12939        212 ----LERLQVPDDVAGAVLFLLSDA  232 (250)
T ss_pred             ----CCCCCCHHHHHHHHHHHhCcc
Confidence                236899999999999999764

>PRK08264 short chain dehydrogenase; Validated

Probab=99.91  E-value=2e-22  Score=164.58  Aligned_cols=165  Identities=18%  Similarity=0.157  Sum_probs=129.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++++|+||||||+||++++++|+++|+ +|++++|+.        +....      ...++.++.+|++|.+++.++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~--------~~~~~------~~~~~~~~~~D~~~~~~~~~~   67 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDP--------ESVTD------LGPRVVPLQLDVTDPASVAAA   67 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecCh--------hhhhh------cCCceEEEEecCCCHHHHHHH
Confidence            344568999999999999999999999998 999999987        22111      234788999999999999888


Q ss_pred             hcC---CCEEEEeccc-CCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           80 IAG---CTGVLHVATP-VDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        80 ~~~---~d~vih~a~~-~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                      ++.   +|+|||+|+. ...     ...+.....+++|+.++.++++++.+    .+ .+++|++||...+.+.      
T Consensus        68 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~------  140 (238)
T PRK08264         68 AEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNF------  140 (238)
T ss_pred             HHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCC------
Confidence            874   7999999997 222     11222357788999999999998653    34 6789999998764322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~  202 (285)
                                      ++...|+.+|.+.|.+.+.++.+.   +++++++||+.+.++.
T Consensus       141 ----------------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~  183 (238)
T PRK08264        141 ----------------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM  183 (238)
T ss_pred             ----------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence                            234579999999999998887664   8999999999998764

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.91  E-value=1.8e-22  Score=166.44  Aligned_cols=209  Identities=11%  Similarity=0.073  Sum_probs=149.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++.....++.++.+|++|.+.+.++++ 
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   79 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITA--------ERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEH   79 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22221 12221223467788999999998887764 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+|+....     ...+.++..+++|+.++..+++++.+.   ...++||++||.....+.       
T Consensus        80 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-------  152 (254)
T PRK08085         80 IEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGR-------  152 (254)
T ss_pred             HHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCC-------
Confidence                  37999999997432     112233578999999998888877642   125799999997643222       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.+.+++.++.++   |+++++++||.+.++........  ......... ..+
T Consensus       153 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~--~~~~~~~~~-~~p  214 (254)
T PRK08085        153 ---------------DTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVED--EAFTAWLCK-RTP  214 (254)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccC--HHHHHHHHh-cCC
Confidence                           233569999999999999988764   89999999999998753321111  111111111 122


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +     ..+..++|+++++.+++...
T Consensus       215 ~-----~~~~~~~~va~~~~~l~~~~  235 (254)
T PRK08085        215 A-----ARWGDPQELIGAAVFLSSKA  235 (254)
T ss_pred             C-----CCCcCHHHHHHHHHHHhCcc
Confidence            2     26889999999999999754

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.2e-22  Score=164.65  Aligned_cols=218  Identities=16%  Similarity=0.144  Sum_probs=150.9

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +.++|++|||||+|+||++++++|+++|++|+++.+...       +.... .......+.++.++.+|++|.+++.+++
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   78 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSR-------DEAEALAAEIRALGRRAVALQADLADEAEVRALV   78 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            345689999999999999999999999999988876531       11111 1111112346888999999999888877


Q ss_pred             cC-------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccceeeeccCCCCc
Q 023244           81 AG-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        81 ~~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      ++       +|+|||+||.....     ..+..+.++++|+.++.++++++.+..   .-+++|++||...+...     
T Consensus        79 ~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~-----  153 (258)
T PRK09134         79 ARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLN-----  153 (258)
T ss_pred             HHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCC-----
Confidence            53       69999999875431     122335789999999999999876542   13588888876433211     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                       +....|+.+|.+.|.+.+.++++.  ++++++++||.+.++...     ....+.......  
T Consensus       154 -----------------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~-----~~~~~~~~~~~~--  209 (258)
T PRK09134        154 -----------------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ-----SPEDFARQHAAT--  209 (258)
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCccc-----ChHHHHHHHhcC--
Confidence                             223469999999999999988764  499999999998764311     111122211111  


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEec
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSS  260 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~  260 (285)
                      ...     ...+++|+|++++++++.+...|. +++++
T Consensus       210 ~~~-----~~~~~~d~a~~~~~~~~~~~~~g~~~~i~g  242 (258)
T PRK09134        210 PLG-----RGSTPEEIAAAVRYLLDAPSVTGQMIAVDG  242 (258)
T ss_pred             CCC-----CCcCHHHHHHHHHHHhcCCCcCCCEEEECC
Confidence            111     458899999999999987665564 55554

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.4e-22  Score=165.65  Aligned_cols=213  Identities=18%  Similarity=0.140  Sum_probs=147.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|+++||||+|+||.+++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|+++++++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   73 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQ--------AELDQLVAEIRAEGGEAVALAGDVRDEAYAKAL   73 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHH
Confidence            334568999999999999999999999999999999976        222221 12212234688899999999988877


Q ss_pred             hc-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCC
Q 023244           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      ++       .+|++||+||....      ...+..+..+++|+.+...+.++    +++.+ .+++|++||..++...  
T Consensus        74 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~--  150 (254)
T PRK07478         74 VALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAG--  150 (254)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccC--
Confidence            75       47999999997532      11122357899999877776554    44444 5789999997654211  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                         .+....|+.||.+.+.+++.++.+.   |+++++++||.+.++...... .. ........
T Consensus       151 -------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~-~~~~~~~~  209 (254)
T PRK07478        151 -------------------FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMG-DT-PEALAFVA  209 (254)
T ss_pred             -------------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCccccccc-CC-HHHHHHHH
Confidence                               1234569999999999999888764   799999999999877422111 11 11111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      . ..+.     ..+..++|+|+.+++++....
T Consensus       210 ~-~~~~-----~~~~~~~~va~~~~~l~s~~~  235 (254)
T PRK07478        210 G-LHAL-----KRMAQPEEIAQAALFLASDAA  235 (254)
T ss_pred             h-cCCC-----CCCcCHHHHHHHHHHHcCchh
Confidence            1 1111     257889999999999997543

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=165.46  Aligned_cols=208  Identities=16%  Similarity=0.203  Sum_probs=147.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+||||||+|+||..++++|+++|++|+++.|+.     ...+....+..   .+.++.++.+|+++.+++.++++  
T Consensus        14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~D~~~~~~i~~~~~~~   85 (258)
T PRK06935         14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-----NWDETRRLIEK---EGRKVTFVQVDLTKPESAEKVVKEA   85 (258)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-----HHHHHHHHHHh---cCCceEEEEcCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999998864     11111122222   23468899999999998888776  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+|+.....     ..+..+..+++|+.+...+.+++.    +.+ .+++|++||..++.+.       
T Consensus        86 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  157 (258)
T PRK06935         86 LEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGG-------  157 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCC-------
Confidence                 479999999975431     122335788999999877776654    444 5799999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|.+.+.+++.++++.   |+++++++||.+.++........  ......... ..+
T Consensus       158 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~--~~~~~~~~~-~~~  219 (258)
T PRK06935        158 ---------------KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRAD--KNRNDEILK-RIP  219 (258)
T ss_pred             ---------------CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccC--hHHHHHHHh-cCC
Confidence                           223469999999999999988764   79999999999988743221111  000111111 111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                           ...+..++|++..+.+++...
T Consensus       220 -----~~~~~~~~dva~~~~~l~s~~  240 (258)
T PRK06935        220 -----AGRWGEPDDLMGAAVFLASRA  240 (258)
T ss_pred             -----CCCCCCHHHHHHHHHHHcChh
Confidence                 126889999999999999754

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.5e-22  Score=167.79  Aligned_cols=207  Identities=18%  Similarity=0.173  Sum_probs=147.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +++||||||+|+||+++++.|+++|++|++++|+.        .... ....+...+.++.++.+|++|.+.+.++++  
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   72 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNE--------TRLASLAQELADHGGEALVVPTDVSDAEACERLIEAA   72 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            36899999999999999999999999999999976        2211 111122223478889999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 -----GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                           .+|+|||+|+.....      ..+.....+++|+.++.++++.+...  ...+++|++||..++.+.        
T Consensus        73 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  144 (263)
T PRK06181         73 VARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGV--------  144 (263)
T ss_pred             HHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCC--------
Confidence                 479999999875542      11123467899999999999988532  114789999998765332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    ++...|+.+|.+.+.+++.++.+   .++++++++||.+.++........         .+.....
T Consensus       145 --------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~---------~~~~~~~  201 (263)
T PRK06181        145 --------------PTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDG---------DGKPLGK  201 (263)
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccc---------ccccccc
Confidence                          23457999999999998887654   489999999999988743221100         0000000


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ......++++++|+|+++..+++..
T Consensus       202 ~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        202 SPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             ccccccCCCCHHHHHHHHHHHhhCC
Confidence            0112237899999999999999853

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.90  E-value=2e-22  Score=162.35  Aligned_cols=204  Identities=21%  Similarity=0.264  Sum_probs=151.1

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +++++++|||||+.||..++++|+++|++|+++.|+.        ++...+. ++.. .+-.+.++.+|+++++++.++.
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~--------~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~   75 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARRE--------DKLEALAKELEDKTGVEVEVIPADLSDPEALERLE   75 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH--------HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHH
Confidence            3568999999999999999999999999999999988        4444433 2222 2346788999999999888876


Q ss_pred             c-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|++|||||...+     ...+...+++++|+.+...|..+    +.+++ -+++|.++|..++.+.    
T Consensus        76 ~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~----  150 (265)
T COG0300          76 DELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPT----  150 (265)
T ss_pred             HHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC----
Confidence            4       48999999998665     22334468999999986666555    45555 6799999999876443    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||+..-.+.+.++.+   .|++++.+.||.+.+++....             +.
T Consensus       151 ------------------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-------------~~  199 (265)
T COG0300         151 ------------------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-------------GS  199 (265)
T ss_pred             ------------------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-------------cc
Confidence                              34568999998766666666555   489999999999998753210             00


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      . .......+-++.++|+|+..+..+.+.+
T Consensus       200 ~-~~~~~~~~~~~~~~~va~~~~~~l~~~k  228 (265)
T COG0300         200 D-VYLLSPGELVLSPEDVAEAALKALEKGK  228 (265)
T ss_pred             c-cccccchhhccCHHHHHHHHHHHHhcCC
Confidence            0 0000112358999999999999998754

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.90  E-value=4.7e-22  Score=163.76  Aligned_cols=221  Identities=16%  Similarity=0.162  Sum_probs=152.7

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..++|+++||||+|+||.+++++|+++|++|++++|+.        +... ..+++.....++.++.+|++|.+++.+++
T Consensus         5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   76 (252)
T PRK07035          5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKL--------DGCQAVADAIVAAGGKAEALACHIGEMEQIDALF   76 (252)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            34568999999999999999999999999999999976        2221 12222122346788899999998887766


Q ss_pred             c-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|+|||+|+....      ...+..+..+++|+.+...+++++.    +.+ .+++|++||.....+.   
T Consensus        77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---  152 (252)
T PRK07035         77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPG---  152 (252)
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCC---
Confidence            5       37999999986421      1122234789999999888877763    334 6799999997654222   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||++.+.+++.++.++   |++++.+.||.+.++........ ...+ .... 
T Consensus       153 -------------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~-~~~~-~~~~-  210 (252)
T PRK07035        153 -------------------DFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKN-DAIL-KQAL-  210 (252)
T ss_pred             -------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCC-HHHH-HHHH-
Confidence                               234569999999999999988764   79999999999987643322111 1111 1111 


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      ...+.     ..+..++|+|+.+.+++.....  .|. +.+.++
T Consensus       211 ~~~~~-----~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~dgg  249 (252)
T PRK07035        211 AHIPL-----RRHAEPSEMAGAVLYLASDASSYTTGECLNVDGG  249 (252)
T ss_pred             ccCCC-----CCcCCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence            11122     2578899999999999976532  343 445544

>PRK07985 oxidoreductase; Provisional

Probab=99.90  E-value=2.8e-22  Score=168.53  Aligned_cols=211  Identities=14%  Similarity=0.098  Sum_probs=147.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|+++.|+..      .+....+.+. ...+.++.++.+|++|.+++.++++  
T Consensus        49 ~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~  122 (294)
T PRK07985         49 DRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVE------EEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA  122 (294)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcc------hhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            479999999999999999999999999998876541      1111122111 1123467889999999988777664  


Q ss_pred             -----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                           .+|++||+|+....      ...+.++..+++|+.++..+++++.+. ...++||++||..++...         
T Consensus       123 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~---------  193 (294)
T PRK07985        123 HKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS---------  193 (294)
T ss_pred             HHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC---------
Confidence                 36999999986421      112223588999999999999998753 113689999998765332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.+|.+.+.+++.++.+   .|+++++++||++.+|....... . ....... ....+. 
T Consensus       194 -------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~-~-~~~~~~~-~~~~~~-  256 (294)
T PRK07985        194 -------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQ-T-QDKIPQF-GQQTPM-  256 (294)
T ss_pred             -------------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCC-C-HHHHHHH-hccCCC-
Confidence                         22346999999999999888876   48999999999999985321100 0 1111111 111122 


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                          ..+..++|+|.++.+++....
T Consensus       257 ----~r~~~pedva~~~~fL~s~~~  277 (294)
T PRK07985        257 ----KRAGQPAELAPVYVYLASQES  277 (294)
T ss_pred             ----CCCCCHHHHHHHHHhhhChhc
Confidence                257889999999999997543

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.1e-22  Score=166.78  Aligned_cols=198  Identities=20%  Similarity=0.090  Sum_probs=145.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|+++||||||+||+.++++|+++|++|++++|+.        +....+. .+    .++.++.+|++|++++.++
T Consensus         1 ~~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   68 (273)
T PRK07825          1 DDLRGKVVAITGGARGIGLATARALAALGARVAIGDLDE--------ALAKETAAEL----GLVVGGPLDVTDPASFAAF   68 (273)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh----ccceEEEccCCCHHHHHHH
Confidence            565678999999999999999999999999999999976        3332222 22    1477889999999987766


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|++||+||.....     ..+.....+++|+.++.++.+.+.    +.+ .++||++||.....+.   
T Consensus        69 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---  144 (273)
T PRK07825         69 LDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPV---  144 (273)
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCC---
Confidence            64       369999999975431     122335788999998888776654    455 6799999998764332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         +....|+.||...+.+.+.++.+   .|+++++++||.+.++.....            ..
T Consensus       145 -------------------~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~------------~~  193 (273)
T PRK07825        145 -------------------PGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT------------GG  193 (273)
T ss_pred             -------------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc------------cc
Confidence                               23456999999888877776655   489999999999876532110            00


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                             .....+++++|+|+.++.++.++..
T Consensus       194 -------~~~~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        194 -------AKGFKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             -------ccCCCCCCHHHHHHHHHHHHhCCCC
Confidence                   0112578999999999999987643

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.8e-22  Score=162.46  Aligned_cols=215  Identities=16%  Similarity=0.122  Sum_probs=152.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+++||||+|+||+++++.|+++|++|++++|+..        .    .   ....++.++.+|++|.+++.+++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~--------~----~---~~~~~~~~~~~D~~~~~~~~~~~   66 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP--------E----T---VDGRPAEFHAADVRDPDQVAALV   66 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh--------h----h---hcCCceEEEEccCCCHHHHHHHH
Confidence            4445789999999999999999999999999999999761        1    0   11236888999999999888877


Q ss_pred             cC-------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 023244           81 AG-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +.       +|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+..+++|++||.....+.    
T Consensus        67 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~----  142 (252)
T PRK07856         67 DAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS----  142 (252)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC----
Confidence            53       59999999864321     1122357899999999999998764    2224689999998754322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                        +....|+.+|.+.+.+++.++.++  .++++.++||.+.++........ ... ..... ..
T Consensus       143 ------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~-~~~~~-~~  201 (252)
T PRK07856        143 ------------------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGD-AEG-IAAVA-AT  201 (252)
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccC-HHH-HHHHh-hc
Confidence                              234569999999999999998775  38999999999988743211110 011 11111 11


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSS  260 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  260 (285)
                      .+.     ..+..++|+|..+.+++....  ..|.. .+.+
T Consensus       202 ~~~-----~~~~~p~~va~~~~~L~~~~~~~i~G~~i~vdg  237 (252)
T PRK07856        202 VPL-----GRLATPADIAWACLFLASDLASYVSGANLEVHG  237 (252)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHcCcccCCccCCEEEECC
Confidence            122     256789999999999997543  24543 4444

>PRK08643 acetoin reductase; Validated

Probab=99.90  E-value=4.7e-22  Score=164.12  Aligned_cols=210  Identities=18%  Similarity=0.161  Sum_probs=145.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||+++++.|+++|++|++++|+.        +.... ..++.....++.++.+|++|++.+.++++  
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   73 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNE--------ETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQV   73 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence            57999999999999999999999999999999976        22211 11221123467889999999998877765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+..+..+++|+.++..+++.+.+    .+...++|++||.....+.       
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-------  146 (256)
T PRK08643         74 VDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-------  146 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC-------
Confidence                 479999999875431     1122357889999998877666643    2323689999998754332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC-------ccHHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA-------GSVRSSLAL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~~~~  217 (285)
                                     +....|+.+|.+.+.+++.++.+   .|++++.++||.+.+|.......       .........
T Consensus       147 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  211 (256)
T PRK08643        147 ---------------PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQ  211 (256)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHH
Confidence                           22356999999999988888765   48999999999998874221000       000000011


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .... .+     ...+..++|+|.++.+++...
T Consensus       212 ~~~~-~~-----~~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        212 FAKD-IT-----LGRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             Hhcc-CC-----CCCCcCHHHHHHHHHHHhCcc
Confidence            1111 11     125778999999999999654

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=3.5e-22  Score=163.24  Aligned_cols=198  Identities=20%  Similarity=0.177  Sum_probs=146.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +++++||||+|+||.+++++|+++|++|++++|+.        +.... ..++...+.++.++.+|+++++++.++++  
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   78 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTE--------ENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQL   78 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999976        22111 11111123478889999999998888776  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+++.....     ..+..+..+++|+.++.++.+++.+    .+ .+++|++||...+++.       
T Consensus        79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-------  150 (239)
T PRK07666         79 KNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGA-------  150 (239)
T ss_pred             HHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCC-------
Confidence                 589999999875431     1122347789999999998888763    34 6789999998765433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.+.+++.++.+   .|++++++|||.+.++.....          .....   
T Consensus       151 ---------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~----------~~~~~---  202 (239)
T PRK07666        151 ---------------AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL----------GLTDG---  202 (239)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc----------ccccc---
Confidence                           23356999999999988877655   489999999999988742111          00001   


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                          ....++..+|+|+++..++..+
T Consensus       203 ----~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        203 ----NPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             ----CCCCCCCHHHHHHHHHHHHhCC
Confidence                1124688999999999999875

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.4e-22  Score=163.39  Aligned_cols=210  Identities=14%  Similarity=0.119  Sum_probs=143.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||++++++|+++|++|++..++..      .+......++...+..+..+..|+++.+++..+++   
T Consensus         4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   77 (252)
T PRK12747          4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK------EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLD   77 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCH------HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHH
Confidence            689999999999999999999999999988754320      01111111121123457788899999876554332   


Q ss_pred             ----------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCc
Q 023244           82 ----------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ----------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                                .+|+|||+||.....     ..+.++.++++|+.++..+++++.+. ....+||++||.......     
T Consensus        78 ~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----  152 (252)
T PRK12747         78 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL-----  152 (252)
T ss_pred             HHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCC-----
Confidence                      489999999974321     11223578889999999999887654 113699999998764322     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||++.+.+++.++.++   |++++++.||.+.++..........  . .......
T Consensus       153 -----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~--~-~~~~~~~  212 (252)
T PRK12747        153 -----------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPM--M-KQYATTI  212 (252)
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHH--H-HHHHHhc
Confidence                             223569999999999999887764   8999999999999885322111111  0 1111111


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .+     ...+.+++|+|+++.+++...
T Consensus       213 ~~-----~~~~~~~~dva~~~~~l~s~~  235 (252)
T PRK12747        213 SA-----FNRLGEVEDIADTAAFLASPD  235 (252)
T ss_pred             Cc-----ccCCCCHHHHHHHHHHHcCcc
Confidence            11     226889999999999998654

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3e-22  Score=165.69  Aligned_cols=211  Identities=15%  Similarity=0.092  Sum_probs=148.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++..  ...++.++.+|++|.+++.+++
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   77 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDA--------ALAERAAAAIARDVAGARVLAVPADVTDAASVAAAV   77 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHH
Confidence            358999999999999999999999999999999976        22221 111111  2346888999999999888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|++||+||.....     ..+.++..+++|+.++..+++++.+    .+ .+++|++||.......    
T Consensus        78 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  152 (260)
T PRK07063         78 AAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKII----  152 (260)
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCC----
Confidence            5       479999999975331     1223357889999999888888653    33 5799999998654322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc--cHHHHHHHHh
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG--SVRSSLALIL  219 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~--~~~~~~~~~~  219 (285)
                                        +....|+.+|.+.+.+.+.++.++   |++++.++||.+-++........  ..........
T Consensus       153 ------------------~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  214 (260)
T PRK07063        153 ------------------PGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETL  214 (260)
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHH
Confidence                              233569999999999999988764   79999999999987643211000  0000011111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                       ...++     ..+..++|+|.++++++....
T Consensus       215 -~~~~~-----~r~~~~~~va~~~~fl~s~~~  240 (260)
T PRK07063        215 -ALQPM-----KRIGRPEEVAMTAVFLASDEA  240 (260)
T ss_pred             -hcCCC-----CCCCCHHHHHHHHHHHcCccc
Confidence             11122     257789999999999997543

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=4e-22  Score=164.82  Aligned_cols=221  Identities=15%  Similarity=0.120  Sum_probs=152.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +.... .........++.++.+|++|+++++++++ 
T Consensus        11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~   82 (259)
T PRK08213         11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKA--------EELEEAAAHLEALGIDALWIAADVADEADIERLAEE   82 (259)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22211 11111123467889999999998876654 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+|+....     ...+..+..+++|+.++.++++++.+.    +..++||++||...+++....   
T Consensus        83 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~---  159 (259)
T PRK08213         83 TLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPE---  159 (259)
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCcc---
Confidence                  47999999987432     111223477889999999999987654    226799999998765433110   


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     ..+...|+.+|++.|.+++.+++++   |+++++++|+.+-++.....    ........... .
T Consensus       160 ---------------~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~-~  219 (259)
T PRK08213        160 ---------------VMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGT----LERLGEDLLAH-T  219 (259)
T ss_pred             ---------------ccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhh----hHHHHHHHHhc-C
Confidence                           0123569999999999999988764   79999999999977643221    11111222111 1


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSS  260 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  260 (285)
                      ++.     .+...+|++..+.+++....  ..|. +++.+
T Consensus       220 ~~~-----~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~  254 (259)
T PRK08213        220 PLG-----RLGDDEDLKGAALLLASDASKHITGQILAVDG  254 (259)
T ss_pred             CCC-----CCcCHHHHHHHHHHHhCccccCccCCEEEECC
Confidence            221     46789999999999986543  2344 34444

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.90  E-value=5.9e-22  Score=162.42  Aligned_cols=218  Identities=17%  Similarity=0.166  Sum_probs=150.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+..      ...............++.++.+|++|.+.+.++++   
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   75 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGN------DCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIE   75 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcH------HHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            468999999999999999999999999999999851      11111112222223468899999999998877765   


Q ss_pred             ----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+++....     ...+..+.+++.|+.++.++.++    +++.+ .++||++||...+.+.        
T Consensus        76 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~--------  146 (245)
T PRK12824         76 EEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQ--------  146 (245)
T ss_pred             HHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCC--------
Confidence                37999999997543     11222357889999998887554    45555 6799999998755322        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.+|.+.+.+++.++.+   .++++++++||.+.++.......    ......... .++
T Consensus       147 --------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~----~~~~~~~~~-~~~  207 (245)
T PRK12824        147 --------------FGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGP----EVLQSIVNQ-IPM  207 (245)
T ss_pred             --------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCH----HHHHHHHhc-CCC
Confidence                          22356999999999888887754   48999999999998875332111    111111111 122


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~~  261 (285)
                           ..+..++|+++++.+++.....   +..++++++
T Consensus       208 -----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12824        208 -----KRLGTPEEIAAAVAFLVSEAAGFITGETISINGG  241 (245)
T ss_pred             -----CCCCCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence                 2577899999999999865322   234555543

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.3e-22  Score=163.42  Aligned_cols=220  Identities=15%  Similarity=0.120  Sum_probs=151.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||||+||++++++|+++|++|++++|+.        +....+.+.  .+.++.++.+|++|.+++.++++  
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDA--------DNGAAVAAS--LGERARFIATDITDDAAIERAVATV   74 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCeeEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999986        222222211  12368899999999998887765  


Q ss_pred             -----CCCEEEEecccCCC----CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 -----GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 -----~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                           .+|++||+|+....    ...+.++..+++|+.++..+++++.+.  ...+++|++||.....+.          
T Consensus        75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~----------  144 (261)
T PRK08265         75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ----------  144 (261)
T ss_pred             HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC----------
Confidence                 46999999997432    112223578899999999888876542  124789999998765332          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  +....|+.+|...+.+++.++.+.   |+++++++||.+.++............ .........++  
T Consensus       145 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~-~~~~~~~~~p~--  209 (261)
T PRK08265        145 ------------TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAK-ADRVAAPFHLL--  209 (261)
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhH-HHHhhcccCCC--
Confidence                        223569999999999998888664   799999999998876422111000000 01111111111  


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                         ..+..++|+|+++.+++.....  .|. +.+.++
T Consensus       210 ---~r~~~p~dva~~~~~l~s~~~~~~tG~~i~vdgg  243 (261)
T PRK08265        210 ---GRVGDPEEVAQVVAFLCSDAASFVTGADYAVDGG  243 (261)
T ss_pred             ---CCccCHHHHHHHHHHHcCccccCccCcEEEECCC
Confidence               2567899999999999975432  343 445444

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.90  E-value=3.4e-22  Score=163.47  Aligned_cols=202  Identities=19%  Similarity=0.215  Sum_probs=146.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||+.++++|+++|++|++++|+.        +....+ ........++.++.+|++|.+++..+++ 
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   76 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQ--------DALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAE   76 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999976        222211 1111123478889999999998877765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++.+    ++.+ .+++|++||...+.+.      
T Consensus        77 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~------  149 (241)
T PRK07454         77 LLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAF------  149 (241)
T ss_pred             HHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCC------
Confidence                  379999999975431     11223577889999888877765    3344 5799999998765322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.+|.+.+.+.+.++.+   .|++++++|||.+-+|......  ..           .
T Consensus       150 ----------------~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~--~~-----------~  200 (241)
T PRK07454        150 ----------------PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET--VQ-----------A  200 (241)
T ss_pred             ----------------CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc--cc-----------c
Confidence                            23457999999999998887644   4899999999999877421100  00           0


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                      .+   ....++..+|+|+++++++..+..
T Consensus       201 ~~---~~~~~~~~~~va~~~~~l~~~~~~  226 (241)
T PRK07454        201 DF---DRSAMLSPEQVAQTILHLAQLPPS  226 (241)
T ss_pred             cc---ccccCCCHHHHHHHHHHHHcCCcc
Confidence            00   011468999999999999987643

>PRK12743 oxidoreductase; Provisional

Probab=99.90  E-value=4.2e-22  Score=164.40  Aligned_cols=218  Identities=15%  Similarity=0.100  Sum_probs=150.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|+++.++..       +.... ..++...+.++.++.+|++|+++++.+++  
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE-------EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL   74 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence            579999999999999999999999999998876541       11111 11221223478899999999988777665  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||++|.....     ..+..+..+++|+.+...+++++.+.    ++-+++|++||.......       
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-------  147 (256)
T PRK12743         75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPL-------  147 (256)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCC-------
Confidence                 379999999975531     11223578999999999999887643    223689999997543221       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.+.+++.++.++   |++++.++||.+.++..... ....  .....  ...+
T Consensus       148 ---------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~-~~~~--~~~~~--~~~~  207 (256)
T PRK12743        148 ---------------PGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD-DSDV--KPDSR--PGIP  207 (256)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc-ChHH--HHHHH--hcCC
Confidence                           234579999999999998887653   79999999999998753221 1100  01111  1111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  261 (285)
                      +.     .+.+++|++.++.+++....  ..|.+ .+.++
T Consensus       208 ~~-----~~~~~~dva~~~~~l~~~~~~~~~G~~~~~dgg  242 (256)
T PRK12743        208 LG-----RPGDTHEIASLVAWLCSEGASYTTGQSLIVDGG  242 (256)
T ss_pred             CC-----CCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            21     46789999999999987543  23543 45444

>PRK06398 aldose dehydrogenase; Validated

Probab=99.90  E-value=1.4e-21  Score=161.43  Aligned_cols=200  Identities=17%  Similarity=0.151  Sum_probs=145.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+..        .          ..++.++.+|++|++++.++++  
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~--------~----------~~~~~~~~~D~~~~~~i~~~~~~~   66 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP--------S----------YNDVDYFKVDVSNKEQVIKGIDYV   66 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcc--------c----------cCceEEEEccCCCHHHHHHHHHHH
Confidence            4589999999999999999999999999999999761        0          1257889999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++..+++++.+    .+ .+++|++||...+...       
T Consensus        67 ~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  138 (258)
T PRK06398         67 ISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVT-------  138 (258)
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCC-------
Confidence                 479999999975431     1122357789999999888887653    33 5799999998764322       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCC-------CccHHHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKF-------AGSVRSSLALI  218 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~-------~~~~~~~~~~~  218 (285)
                                     ++...|+.+|.+.+.+.+.++.++  ++++++++||.+.++......       ...........
T Consensus       139 ---------------~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  203 (258)
T PRK06398        139 ---------------RNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREW  203 (258)
T ss_pred             ---------------CCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhh
Confidence                           234579999999999999998775  499999999999876422110       00000000000


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                       +...+     ...+..++|+|+++.+++...
T Consensus       204 -~~~~~-----~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        204 -GEMHP-----MKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             -hhcCC-----cCCCcCHHHHHHHHHHHcCcc
Confidence             11111     225788999999999999754

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7.2e-22  Score=162.86  Aligned_cols=211  Identities=18%  Similarity=0.186  Sum_probs=147.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+..     . ........+...+.++.++.+|++|.+++.++++. 
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~-----~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~   80 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTD-----D-GLAETAEHIEAAGRRAIQIAADVTSKADLRAAVART   80 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcc-----h-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999998751     0 11111112211234678899999999888877653 


Q ss_pred             ------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            +|+|||+||.....     ..+..+..+++|+.++..+++++.    +.+ .+++|++||.......+.     
T Consensus        81 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~-----  154 (254)
T PRK06114         81 EAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRG-----  154 (254)
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCC-----
Confidence                  69999999975431     122335788999999988777653    333 579999999875433210     


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     .+...|+.+|++.+.+++.++.+   .|+++++++||.+.++.....  ..... ..... ...+
T Consensus       155 ---------------~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~--~~~~~-~~~~~-~~~p  215 (254)
T PRK06114        155 ---------------LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP--EMVHQ-TKLFE-EQTP  215 (254)
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc--cchHH-HHHHH-hcCC
Confidence                           11246999999999999888765   489999999999988753221  11111 11111 1112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +.     .+..++|++..+++++...
T Consensus       216 ~~-----r~~~~~dva~~~~~l~s~~  236 (254)
T PRK06114        216 MQ-----RMAKVDEMVGPAVFLLSDA  236 (254)
T ss_pred             CC-----CCcCHHHHHHHHHHHcCcc
Confidence            22     5778999999999999754

>PRK08017 oxidoreductase; Provisional

Probab=99.90  E-value=6.8e-22  Score=163.13  Aligned_cols=205  Identities=20%  Similarity=0.190  Sum_probs=142.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+|+||||||+||+++++.|+++|++|++++|+.        ++.+.+...     +++.+.+|++|.+++..+++   
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~i~   68 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKP--------DDVARMNSL-----GFTGILLDLDDPESVERAADEVI   68 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHhHHHHhC-----CCeEEEeecCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999976        333333222     46788999999887766553   


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|.+||++|.....     ..+..+..++.|+.++.++    ++.+++.+ .+++|++||..+..+.       
T Consensus        69 ~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~-------  140 (256)
T PRK08017         69 ALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLIST-------  140 (256)
T ss_pred             HhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCC-------
Confidence                 358999999865431     1122347889999988775    56666666 6899999997543221       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHH---HcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE---EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~---~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|...|.+.+.++.   ..+++++++|||.+.++.........        ......
T Consensus       141 ---------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~--------~~~~~~  197 (256)
T PRK08017        141 ---------------PGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQ--------SDKPVE  197 (256)
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchh--------hccchh
Confidence                           2345699999999998776543   35899999999988765321100000        000000


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDAK  253 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  253 (285)
                      .+....+.+++++|+++++..+++++...
T Consensus       198 ~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        198 NPGIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             hhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            00111246799999999999999876544

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.90  E-value=6e-22  Score=163.49  Aligned_cols=215  Identities=15%  Similarity=0.138  Sum_probs=152.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||+.++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.+++.++++ 
T Consensus        10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   81 (256)
T PRK06124         10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNA--------ATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFAR   81 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22221 11121223468899999999998887765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+++.....     ..+..+..+++|+.++.++.+.+.+    .+ .+++|++||..+..+.      
T Consensus        82 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~------  154 (256)
T PRK06124         82 IDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVAR------  154 (256)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCC------
Confidence                  359999999975431     1122357789999999998866643    44 6799999998654332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.+|.+.+.+++.++.+.   +++++.++||.+.++........  ......... ..
T Consensus       155 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~--~~~~~~~~~-~~  215 (256)
T PRK06124        155 ----------------AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAAD--PAVGPWLAQ-RT  215 (256)
T ss_pred             ----------------CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccC--hHHHHHHHh-cC
Confidence                            223569999999999988877653   79999999999998853221111  111111111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--CceEE
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRYI  257 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~  257 (285)
                      +.     ..+++++|++.++++++.....  .|.++
T Consensus       216 ~~-----~~~~~~~~~a~~~~~l~~~~~~~~~G~~i  246 (256)
T PRK06124        216 PL-----GRWGRPEEIAGAAVFLASPAASYVNGHVL  246 (256)
T ss_pred             CC-----CCCCCHHHHHHHHHHHcCcccCCcCCCEE
Confidence            22     2689999999999999986533  35543

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.2e-21  Score=163.32  Aligned_cols=214  Identities=14%  Similarity=0.122  Sum_probs=147.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      ||+++||||||+||++++++|+++|++|++++|+.        +....+...     ++.++.+|++|.+++.++++   
T Consensus         1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~-----~~~~~~~Dl~~~~~~~~~~~~~~   67 (274)
T PRK05693          1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKA--------EDVEALAAA-----GFTAVQLDVNDGAALARLAEELE   67 (274)
T ss_pred             CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCeEEEeeCCCHHHHHHHHHHHH
Confidence            36899999999999999999999999999999986        333322221     46788999999988877764   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                          .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.   + .+++|++||.......         
T Consensus        68 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  137 (274)
T PRK05693         68 AEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS-RGLVVNIGSVSGVLVT---------  137 (274)
T ss_pred             HhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCEEEEECCccccCCC---------
Confidence                479999999975431     11223578899999999988887432   3 4689999997654322         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC----------ccHHHHHH
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA----------GSVRSSLA  216 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~----------~~~~~~~~  216 (285)
                                   +....|+.+|.+.+.+.+.++.+   .|+++++++||.+.++.......          ........
T Consensus       138 -------------~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (274)
T PRK05693        138 -------------PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREH  204 (274)
T ss_pred             -------------CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHH
Confidence                         23356999999999988877765   58999999999998764322100          00110000


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS  259 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  259 (285)
                      ......     ...-....++|+|+.++.+++++.....+..+
T Consensus       205 ~~~~~~-----~~~~~~~~~~~~a~~i~~~~~~~~~~~~~~~g  242 (274)
T PRK05693        205 IQARAR-----ASQDNPTPAAEFARQLLAAVQQSPRPRLVRLG  242 (274)
T ss_pred             HHHHHH-----hccCCCCCHHHHHHHHHHHHhCCCCCceEEec
Confidence            000000     00013468999999999999876554444443

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.6e-22  Score=161.68  Aligned_cols=193  Identities=19%  Similarity=0.199  Sum_probs=145.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +++++||||||+||++++++|+++|++|++++|+.        +....+...   ..++.++.+|++|.+++.+++++  
T Consensus         1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   69 (240)
T PRK06101          1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ--------SVLDELHTQ---SANIFTLAFDVTDHPGTKAALSQLP   69 (240)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHh---cCCCeEEEeeCCCHHHHHHHHHhcc
Confidence            36899999999999999999999999999999976        333333221   23678899999999999998875  


Q ss_pred             --CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCCc
Q 023244           83 --CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (285)
Q Consensus        83 --~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (285)
                        +|.+||+||.....     ..+..+.++++|+.++.++++++... .+.+++|++||.....+.              
T Consensus        70 ~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~--------------  135 (240)
T PRK06101         70 FIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELAL--------------  135 (240)
T ss_pred             cCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCC--------------
Confidence              58999999864321     11223478999999999999998763 113689999987643322              


Q ss_pred             hhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCc
Q 023244          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT  231 (285)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                              +....|+.+|.+.+.+.+.++.+   .|++++++|||.++++.....               ....+     
T Consensus       136 --------~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~---------------~~~~~-----  187 (240)
T PRK06101        136 --------PRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN---------------TFAMP-----  187 (240)
T ss_pred             --------CCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC---------------CCCCC-----
Confidence                    22356999999999998887743   589999999999998753211               00011     


Q ss_pred             ceeeHHHHHHHHHHhhcCC
Q 023244          232 SMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+..+|+|+.++..++..
T Consensus       188 ~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        188 MIITVEQASQEIRAQLARG  206 (240)
T ss_pred             cccCHHHHHHHHHHHHhcC
Confidence            2478999999999999864

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.90  E-value=9.7e-22  Score=167.56  Aligned_cols=191  Identities=19%  Similarity=0.141  Sum_probs=129.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+++||||+|+||.+++++|+++|++|++++|+.        +.... ..++.....++.++.+|++|.+++.++++.
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   76 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNL--------KKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDD   76 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHH
Confidence            568899999999999999999999999999999976        22221 222212234688999999999988887753


Q ss_pred             -------CCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHh----cCC-ccEEEEeccceeeeccCCCC
Q 023244           83 -------CTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----SGT-VKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        83 -------~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~~v~~SS~~~~~~~~~~~  144 (285)
                             +|+|||+||.....      ..+..+.++++|+.++.++++++.+    .+. .++||++||...++......
T Consensus        77 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~  156 (322)
T PRK07453         77 FRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGK  156 (322)
T ss_pred             HHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCc
Confidence                   89999999974321      1123358899999999998887754    221 35999999987643211100


Q ss_pred             ccc----ccCCCC--chhh-------hhhcCCCCchhHhhHHHHHHHHHHHHHHc----CCcEEEeccCceecCC
Q 023244          145 DMM----DETFWS--DVDY-------IRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPF  202 (285)
Q Consensus       145 ~~~----~e~~~~--~~~~-------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~i~~~i~Rp~~v~g~~  202 (285)
                      .+.    +.++..  ....       ......+...|+.||.+.+.+.+.+++++    |++++++|||+|++..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~  231 (322)
T PRK07453        157 IPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP  231 (322)
T ss_pred             cCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence            000    000000  0000       00011345679999999988888887764    7999999999998643

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.90  E-value=9.1e-22  Score=162.34  Aligned_cols=218  Identities=13%  Similarity=0.080  Sum_probs=152.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+|+||||+|+||+++++.|+++|++|++++|+.        +....+ .++.....++.++.+|++|.+++.++++ 
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~   81 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA--------DAANHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999998876        222211 1111123467888999999998877654 


Q ss_pred             ------CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|++||+|+.....    ..+..+..+++|+.++.++++++..    .+ .+++|++||..+..+.       
T Consensus        82 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------  153 (255)
T PRK06113         82 ALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN-------  153 (255)
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC-------
Confidence                  369999999975431    1122346689999999999999863    23 4699999997653221       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.+|.+.+.+++.++.+   .|++++++.||.+.++.......   ......... ..+
T Consensus       154 ---------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~---~~~~~~~~~-~~~  214 (255)
T PRK06113        154 ---------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQ-HTP  214 (255)
T ss_pred             ---------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccC---HHHHHHHHh-cCC
Confidence                           23456999999999999988765   37999999999998875332111   111111111 112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      +.     .+..++|+++++.+++.....  .| .+++.++
T Consensus       215 ~~-----~~~~~~d~a~~~~~l~~~~~~~~~G~~i~~~gg  249 (255)
T PRK06113        215 IR-----RLGQPQDIANAALFLCSPAASWVSGQILTVSGG  249 (255)
T ss_pred             CC-----CCcCHHHHHHHHHHHcCccccCccCCEEEECCC
Confidence            22     578999999999999975432  34 4555554

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=7.8e-22  Score=161.84  Aligned_cols=219  Identities=16%  Similarity=0.134  Sum_probs=152.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |..++|+|+||||||+||+++++.|+++|++|+++ .|+.        +.... ...+...+.++.++.+|++|++++.+
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINE--------EAAQELLEEIKEEGGDAIAVKADVSSEEDVEN   72 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            55667899999999999999999999999999998 8865        22211 11111123468899999999998877


Q ss_pred             Hhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCC
Q 023244           79 AIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      +++       .+|+|||++|.....     ..+..+..+++|+.+..++++.+..    .+ .+++|++||...+.+.  
T Consensus        73 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~--  149 (247)
T PRK05565         73 LVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGA--  149 (247)
T ss_pred             HHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCC--
Confidence            765       589999999976421     1222357889999998888877754    33 5789999998765443  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          +....|+.+|.+.+.+++.++.+   .|++++++|||.+.++..........    ....
T Consensus       150 --------------------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~----~~~~  205 (247)
T PRK05565        150 --------------------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDK----EGLA  205 (247)
T ss_pred             --------------------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHH----HHHH
Confidence                                22346999999888888777665   38999999999997764322111111    1000


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEec
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSS  260 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~  260 (285)
                      . ...     ...+..++|++..+.+++....  ..|.+ .+.+
T Consensus       206 ~-~~~-----~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~~  243 (247)
T PRK05565        206 E-EIP-----LGRLGKPEEIAKVVLFLASDDASYITGQIITVDG  243 (247)
T ss_pred             h-cCC-----CCCCCCHHHHHHHHHHHcCCccCCccCcEEEecC
Confidence            0 111     1257899999999999997643  23544 4444

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=1.6e-21  Score=158.88  Aligned_cols=203  Identities=17%  Similarity=0.147  Sum_probs=146.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~   79 (285)
                      |..++|+++||||+|+||++++++|+++|++|++++|+..        ..        ...++.++.+|+++. +.+.+.
T Consensus         1 ~~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~--------~~--------~~~~~~~~~~D~~~~~~~~~~~   64 (235)
T PRK06550          1 QEFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK--------PD--------LSGNFHFLQLDLSDDLEPLFDW   64 (235)
T ss_pred             CCCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcc--------cc--------cCCcEEEEECChHHHHHHHHHh
Confidence            5666789999999999999999999999999999998761        10        123678899999997 444444


Q ss_pred             hcCCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccccc
Q 023244           80 IAGCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                      +..+|+|||+|+....      ...+..+..+++|+.++.++++++..    .+ .+++|++||...+.+.         
T Consensus        65 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------  134 (235)
T PRK06550         65 VPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAG---------  134 (235)
T ss_pred             hCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC---------
Confidence            4568999999996421      11223357899999999999888754    23 4689999998764332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.+|...+.+.+.++.++   |+++++++||.+.++........  ......... ..+  
T Consensus       135 -------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~-~~~--  196 (235)
T PRK06550        135 -------------GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP--GGLADWVAR-ETP--  196 (235)
T ss_pred             -------------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc--hHHHHHHhc-cCC--
Confidence                         223469999999999988888765   89999999999988754322211  111111111 112  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                         ...+...+|+|+++++++...
T Consensus       197 ---~~~~~~~~~~a~~~~~l~s~~  217 (235)
T PRK06550        197 ---IKRWAEPEEVAELTLFLASGK  217 (235)
T ss_pred             ---cCCCCCHHHHHHHHHHHcChh
Confidence               225789999999999999654

>PRK06196 oxidoreductase; Provisional

Probab=99.90  E-value=9.5e-22  Score=167.07  Aligned_cols=220  Identities=15%  Similarity=0.045  Sum_probs=145.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+|+||||||+||++++++|+++|++|++++|+.        +.... ..++    .++.++.+|++|.++++++++ 
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~--------~~~~~~~~~l----~~v~~~~~Dl~d~~~v~~~~~~   92 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRP--------DVAREALAGI----DGVEVVMLDLADLESVRAFAER   92 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh----hhCeEEEccCCCHHHHHHHHHH
Confidence            357999999999999999999999999999999986        22222 2222    147789999999998887764 


Q ss_pred             ------CCCEEEEecccCCCC---CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||.....   ..+..+..+++|+.++..+.+.    +++.+ .+++|++||........... ...
T Consensus        93 ~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~-~~~  170 (315)
T PRK06196         93 FLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWD-DPH  170 (315)
T ss_pred             HHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCcc-ccC
Confidence                  479999999975431   1222357899999996665554    44444 57999999975432211100 000


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                      ...+         .++...|+.||.+.+.+.+.++++   .|+++++++||.+.+|............ .........++
T Consensus       171 ~~~~---------~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~-~~~~~~~~~~~  240 (315)
T PRK06196        171 FTRG---------YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVA-LGWVDEHGNPI  240 (315)
T ss_pred             ccCC---------CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhh-hhhhhhhhhhh
Confidence            0010         123457999999999998888765   4799999999999998543211100000 00000000111


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .    ..+..++|.|..+++++..+.
T Consensus       241 ~----~~~~~~~~~a~~~~~l~~~~~  262 (315)
T PRK06196        241 D----PGFKTPAQGAATQVWAATSPQ  262 (315)
T ss_pred             h----hhcCCHhHHHHHHHHHhcCCc
Confidence            0    035678999999999997643

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.89  E-value=5.2e-22  Score=162.92  Aligned_cols=209  Identities=17%  Similarity=0.151  Sum_probs=141.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEe-cCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      |++++||||+|+||+.++++|+++|++|+++. |+.       ........++...+.++.++.+|++|.+++.+++++ 
T Consensus         1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~   73 (247)
T PRK09730          1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL-------HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAI   73 (247)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHH
Confidence            36899999999999999999999999998754 443       011111112211234688899999999988887763 


Q ss_pred             ------CCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCC
Q 023244           83 ------CTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        83 ------~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            +|+|||+++.....      ..+.....+++|+.++..+++++...      +..++||++||...+.+.+   
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~---  150 (247)
T PRK09730         74 DQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAP---  150 (247)
T ss_pred             HHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCC---
Confidence                  58999999975321      11223478999999998877765442      1135799999986553321   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .....|+.+|...+.+++.++.+   .+++++++|||.++||......  ............
T Consensus       151 ------------------~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~  210 (247)
T PRK09730        151 ------------------GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNI  210 (247)
T ss_pred             ------------------CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC--CHHHHHHHHhcC
Confidence                              11235999999999988887755   3899999999999998643221  111111111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                        ++.     ...+++|+++++.+++...
T Consensus       211 --~~~-----~~~~~~dva~~~~~~~~~~  232 (247)
T PRK09730        211 --PMQ-----RGGQPEEVAQAIVWLLSDK  232 (247)
T ss_pred             --CCC-----CCcCHHHHHHHHHhhcChh
Confidence              111     2458999999999999754

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.89  E-value=8.4e-22  Score=161.86  Aligned_cols=210  Identities=18%  Similarity=0.169  Sum_probs=142.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+|+||||+|+||+.+++.|+++|++|+++.++.+       +... ....+.....++.++.+|++|.+++.++++  
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   74 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDA-------AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAV   74 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHH
Confidence            579999999999999999999999999987764431       2111 111111123478899999999988877664  


Q ss_pred             -----CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc-C-----CccEEEEeccceeeeccCCCC
Q 023244           82 -----GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS-G-----TVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~-~-----~~~~~v~~SS~~~~~~~~~~~  144 (285)
                           .+|+|||+||.....      ..+.....+++|+.++..+++++.+. .     +-.+||++||.....+..   
T Consensus        75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~---  151 (248)
T PRK06947         75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSP---  151 (248)
T ss_pred             HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCC---
Confidence                 479999999975321      11223467899999998887654432 1     124699999977543321   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .....|+.||.+.+.+++.++++.   |++++++|||.+.+|.....  ..... ... .+.
T Consensus       152 ------------------~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~--~~~~~-~~~-~~~  209 (248)
T PRK06947        152 ------------------NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG--GQPGR-AAR-LGA  209 (248)
T ss_pred             ------------------CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc--CCHHH-HHH-Hhh
Confidence                              112359999999999998888764   79999999999998853221  01111 111 111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ..+..     .+..++|+++.+++++.++.
T Consensus       210 ~~~~~-----~~~~~e~va~~~~~l~~~~~  234 (248)
T PRK06947        210 QTPLG-----RAGEADEVAETIVWLLSDAA  234 (248)
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHcCccc
Confidence            11111     35789999999999998654

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.89  E-value=6.3e-22  Score=162.85  Aligned_cols=208  Identities=14%  Similarity=0.134  Sum_probs=147.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||+.++++|+++|++|++++|+..      .+....+...   +.++.++.+|++|.+++.++++  
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~------~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~   77 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA------PETQAQVEAL---GRKFHFITADLIQQKDIDSIVSQA   77 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH------HHHHHHHHHc---CCeEEEEEeCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999888641      1111222222   3468889999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||.....     ..+.++..+++|+.++..+.+++.+    .+..+++|++||...+.+.       
T Consensus        78 ~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------  150 (251)
T PRK12481         78 VEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG-------  150 (251)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC-------
Confidence                 379999999975431     1223357889999998888777643    2223699999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.||.+.+.+++.++.+   +|++++.++||.+-++..... ... ......... ..+
T Consensus       151 ---------------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~-~~~-~~~~~~~~~-~~p  212 (251)
T PRK12481        151 ---------------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAAL-RAD-TARNEAILE-RIP  212 (251)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhc-ccC-hHHHHHHHh-cCC
Confidence                           12346999999999999888875   489999999999987642211 100 000111111 112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..     .+..++|+|.++.+++...
T Consensus       213 ~~-----~~~~peeva~~~~~L~s~~  233 (251)
T PRK12481        213 AS-----RWGTPDDLAGPAIFLSSSA  233 (251)
T ss_pred             CC-----CCcCHHHHHHHHHHHhCcc
Confidence            22     5789999999999999754

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.9e-22  Score=163.47  Aligned_cols=206  Identities=16%  Similarity=0.092  Sum_probs=145.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+|+||||||+||++++++|+++|++|++++|+.        +... ...++...+.++.++.+|++|.+++.++++   
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~   72 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNE--------EGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACE   72 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999876        2222 222222224478889999999988887765   


Q ss_pred             ----CCCEEEEecccCCCC--CC---ChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE--DK---EPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~--~~---~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+||.....  ..   +..+.++++|+.++.++.+.    +++.+ .+++|++||..++.+.        
T Consensus        73 ~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~--------  143 (270)
T PRK05650         73 EKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQG--------  143 (270)
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCC--------
Confidence                489999999976531  11   22346788998877776655    45555 6899999998754332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.+|.+.+.+.+.++.+.   |+++++++||.+.++......... ..........    
T Consensus       144 --------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~----  204 (270)
T PRK05650        144 --------------PAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPN-PAMKAQVGKL----  204 (270)
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCc-hhHHHHHHHH----
Confidence                          233569999999888888887763   899999999999887533211111 1000000000    


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                         ....+++++|+|+.++.++++.
T Consensus       205 ---~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        205 ---LEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             ---hhcCCCCHHHHHHHHHHHHhCC
Confidence               0114689999999999999864

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.89  E-value=1.3e-21  Score=163.50  Aligned_cols=209  Identities=16%  Similarity=0.156  Sum_probs=146.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.+++..+++ 
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   80 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQ--------EKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQ   80 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence            358999999999999999999999999999999976        22221 11221123468889999999988877664 


Q ss_pred             ------CCCEEEEecccCCCC--------------------CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEe
Q 023244           82 ------GCTGVLHVATPVDFE--------------------DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYT  131 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~--------------------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~  131 (285)
                            .+|+|||+|+.....                    ..+.....+++|+.++..+++++    ++.+ .+++|++
T Consensus        81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~i  159 (278)
T PRK08277         81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINI  159 (278)
T ss_pred             HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEE
Confidence                  579999999964321                    11223577889999887665554    4444 5799999


Q ss_pred             ccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC
Q 023244          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA  208 (285)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~  208 (285)
                      ||..++...                      ++...|+.+|.+.+.+++.++.++   |+++++++||.+.++.......
T Consensus       160 sS~~~~~~~----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~  217 (278)
T PRK08277        160 SSMNAFTPL----------------------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLF  217 (278)
T ss_pred             ccchhcCCC----------------------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhc
Confidence            998765322                      234569999999999999988775   7999999999999885322110


Q ss_pred             ---ccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          209 ---GSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       209 ---~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                         ............ ..+.     ..+..++|+|+++++++..
T Consensus       218 ~~~~~~~~~~~~~~~-~~p~-----~r~~~~~dva~~~~~l~s~  255 (278)
T PRK08277        218 NEDGSLTERANKILA-HTPM-----GRFGKPEELLGTLLWLADE  255 (278)
T ss_pred             cccccchhHHHHHhc-cCCc-----cCCCCHHHHHHHHHHHcCc
Confidence               000011111111 1122     2578899999999999876

>PRK08589 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.2e-21  Score=163.17  Aligned_cols=223  Identities=14%  Similarity=0.109  Sum_probs=150.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||+|+||+++++.|+++|++|++++|+.        +......++.....++.++.+|++|.+++.++++  
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   76 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAE--------AVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI   76 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH--------HHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence            368999999999999999999999999999999874        2222222222223468899999999988877765  


Q ss_pred             -----CCCEEEEecccCCC--C----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 -----GCTGVLHVATPVDF--E----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 -----~~d~vih~a~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                           .+|++||+||....  .    ..+..+..+++|+.+...+.+++.+.  ..-+++|++||...+...        
T Consensus        77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  148 (272)
T PRK08589         77 KEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAAD--------  148 (272)
T ss_pred             HHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCC--------
Confidence                 36999999997532  1    11223577889999887776665432  112699999998754322        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh---cCc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL---GNR  222 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~---~~~  222 (285)
                                    +....|+.||.+.+.+++.++.++   |++++++.||.|.++..................   ...
T Consensus       149 --------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  214 (272)
T PRK08589        149 --------------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWM  214 (272)
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhcc
Confidence                          223569999999999999988764   799999999999887432211100000000000   001


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .+.     ..+..++|+++++.+++....  ..|. +.+.++
T Consensus       215 ~~~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~i~vdgg  251 (272)
T PRK08589        215 TPL-----GRLGKPEEVAKLVVFLASDDSSFITGETIRIDGG  251 (272)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHcCchhcCcCCCEEEECCC
Confidence            111     246789999999999997543  2344 344444

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.9e-22  Score=163.10  Aligned_cols=209  Identities=14%  Similarity=0.110  Sum_probs=148.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||.+++++|+++|++|++++|+.        +....+ ..+.....++.++.+|+++.+++.++++ 
T Consensus         9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (263)
T PRK07814          9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTE--------SQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ   80 (263)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        222221 1111123468889999999998877765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+|+.....     ..+..+.++++|+.++.++.+++.+.    ...+++|++||.....+.      
T Consensus        81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  154 (263)
T PRK07814         81 AVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAG------  154 (263)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCC------
Confidence                  579999999864321     11223588999999999999998641    225789999997653222      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                      ++...|+.+|.+.+.+++.++.+.  +++++.++||.+.++........  ..+.....+. .+
T Consensus       155 ----------------~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~-~~  215 (263)
T PRK07814        155 ----------------RGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAAN--DELRAPMEKA-TP  215 (263)
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCC--HHHHHHHHhc-CC
Confidence                            234579999999999999988764  58999999999977642211000  1111111111 11


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .     ..+..++|+|+++++++...
T Consensus       216 ~-----~~~~~~~~va~~~~~l~~~~  236 (263)
T PRK07814        216 L-----RRLGDPEDIAAAAVYLASPA  236 (263)
T ss_pred             C-----CCCcCHHHHHHHHHHHcCcc
Confidence            1     24678999999999999753

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=161.12  Aligned_cols=220  Identities=16%  Similarity=0.113  Sum_probs=152.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +... ....+...+.++.++.+|++|.+++.+++++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~   77 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDA--------AGGEETVALIREAGGEALFVACDVTRDAEVKALVEQ   77 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            458999999999999999999999999999999986        2211 1112222234788999999999988887653


Q ss_pred             -------CCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           83 -------CTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        83 -------~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             +|+|||+|+.....      ..+..+..+++|+.++..+++++    .+.+ .+++|++||..++.+.     
T Consensus        78 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~-----  151 (253)
T PRK06172         78 TIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAA-----  151 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCC-----
Confidence                   59999999974321      11223477889999987776654    3344 5789999998765432     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|.+.+.+++.++.++   |+++++++||.+-++......... ......... .
T Consensus       152 -----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~-~~~~~~~~~-~  212 (253)
T PRK06172        152 -----------------PKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEAD-PRKAEFAAA-M  212 (253)
T ss_pred             -----------------CCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccC-hHHHHHHhc-c
Confidence                             234569999999999999988775   799999999999877532211100 111111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  261 (285)
                      .++     ..+..++|++..+.+++....  ..|.+ .+.++
T Consensus       213 ~~~-----~~~~~p~~ia~~~~~l~~~~~~~~~G~~i~~dgg  249 (253)
T PRK06172        213 HPV-----GRIGKVEEVASAVLYLCSDGASFTTGHALMVDGG  249 (253)
T ss_pred             CCC-----CCccCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            112     256789999999999997543  34544 45544

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-21  Score=160.21  Aligned_cols=209  Identities=14%  Similarity=0.158  Sum_probs=147.3

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++..+.+|++|.+++.++++
T Consensus         7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   78 (253)
T PRK05867          7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHL--------DALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLD   78 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999976        222221 1222223468889999999998887765


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||.....     ..+.++..+++|+.++..+.+++...    +...++|++||........    
T Consensus        79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~----  154 (253)
T PRK05867         79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINV----  154 (253)
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCC----
Confidence                   579999999975431     12223577899999999988887532    2135799999875421110    


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      ......|+.+|.+.+.+++.+++++   |+++++++||.+-++..... .   . ...... ..
T Consensus       155 ----------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~-~---~-~~~~~~-~~  212 (253)
T PRK05867        155 ----------------PQQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY-T---E-YQPLWE-PK  212 (253)
T ss_pred             ----------------CCCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc-h---H-HHHHHH-hc
Confidence                            0112469999999999999988764   89999999999988753221 1   1 111111 11


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .+.     ..+..++|+|+++.+++...
T Consensus       213 ~~~-----~r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        213 IPL-----GRLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             CCC-----CCCcCHHHHHHHHHHHcCcc
Confidence            122     25789999999999999754

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.89  E-value=9.2e-22  Score=168.09  Aligned_cols=202  Identities=16%  Similarity=0.112  Sum_probs=143.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+|+||||||+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++  
T Consensus         8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~--------~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~   79 (334)
T PRK07109          8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGE--------EGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRA   79 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999976        22221 11121223478889999999998888765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+|+.....     ..+..+..+++|+.+..++    ++.+++.+ .++||++||..++...       
T Consensus        80 ~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~-------  151 (334)
T PRK07109         80 EEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSI-------  151 (334)
T ss_pred             HHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCC-------
Confidence                 479999999975431     1122346788887776654    44455554 5799999998865332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                     +....|+.+|.+.+.+.+.++.+.     ++++++++||.+.+|....        .........
T Consensus       152 ---------------~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~--------~~~~~~~~~  208 (334)
T PRK07109        152 ---------------PLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW--------ARSRLPVEP  208 (334)
T ss_pred             ---------------CcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh--------hhhhccccc
Confidence                           234579999999988887776552     6999999999998774211        001111111


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .+     ...+..++|+|+++++++.++
T Consensus       209 ~~-----~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        209 QP-----VPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             cC-----CCCCCCHHHHHHHHHHHHhCC
Confidence            11     124678999999999999875

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-21  Score=162.52  Aligned_cols=202  Identities=18%  Similarity=0.149  Sum_probs=145.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      ||++|||||||+||++++++|+++|++|++++|+.        +....+.... .+.++.++.+|++|.+++.++++   
T Consensus         1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~   71 (260)
T PRK08267          1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINE--------AGLAALAAEL-GAGNAWTGALDVTDRAAWDAALADFA   71 (260)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHh-cCCceEEEEecCCCHHHHHHHHHHHH
Confidence            46899999999999999999999999999999987        3333222211 13478899999999988887765   


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+..+.++++|+.++.++++++.+    .+ .+++|++||....++.       
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------  143 (260)
T PRK08267         72 AATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQ-------  143 (260)
T ss_pred             HHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCC-------
Confidence                 359999999986531     1122357899999999999888743    33 5799999998765443       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.||.+.+.+.+.++.+   .++++++++||.+.++...........   .....    
T Consensus       144 ---------------~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~---~~~~~----  201 (260)
T PRK08267        144 ---------------PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA---GSTKR----  201 (260)
T ss_pred             ---------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh---hhHhh----
Confidence                           12356999999999999888765   379999999999977642220000000   00000    


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                           ....+..+|++.+++.+++.+
T Consensus       202 -----~~~~~~~~~va~~~~~~~~~~  222 (260)
T PRK08267        202 -----LGVRLTPEDVAEAVWAAVQHP  222 (260)
T ss_pred             -----ccCCCCHHHHHHHHHHHHhCC
Confidence                 012467799999999999754

>PRK09186 flagellin modification protein A; Provisional

Probab=99.89  E-value=1.5e-21  Score=161.06  Aligned_cols=222  Identities=18%  Similarity=0.165  Sum_probs=147.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCC--CCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP--GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+|+||||||+||+++++.|+++|++|++++|+.        +.... ..++.  .....+.++.+|++|++++.+++
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDK--------EALNELLESLGKEFKSKKLSLVELDITDQESLEEFL   74 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCh--------HHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHH
Confidence            368999999999999999999999999999999876        22211 11111  11235667799999999888887


Q ss_pred             cC-------CCEEEEecccCCC--------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccC
Q 023244           81 AG-------CTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        81 ~~-------~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++       +|+|||+|+....        ...+.....+++|+.+...+++++    ++.+ .++||++||..++....
T Consensus        75 ~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~  153 (256)
T PRK09186         75 SKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPK  153 (256)
T ss_pred             HHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhcccc
Confidence            63       7999999975321        111223467888887776655554    4455 67999999976543221


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                         ....++.+.         .....|+.||...+.+.+.++.+   .++++++++||.++++..     ..   +....
T Consensus       154 ---~~~~~~~~~---------~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~-----~~---~~~~~  213 (256)
T PRK09186        154 ---FEIYEGTSM---------TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP-----EA---FLNAY  213 (256)
T ss_pred             ---chhcccccc---------CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC-----HH---HHHHH
Confidence               111122211         11236999999999999888776   479999999999876531     11   11111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCCC--CceE-EEec
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRY-ICSS  260 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~  260 (285)
                      .... .     ...+++++|+|+++++++.+...  .|.+ .+.+
T Consensus       214 ~~~~-~-----~~~~~~~~dva~~~~~l~~~~~~~~~g~~~~~~~  252 (256)
T PRK09186        214 KKCC-N-----GKGMLDPDDICGTLVFLLSDQSKYITGQNIIVDD  252 (256)
T ss_pred             HhcC-C-----ccCCCCHHHhhhhHhheeccccccccCceEEecC
Confidence            1111 1     12589999999999999975532  3544 4444

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.89  E-value=1.5e-21  Score=159.92  Aligned_cols=215  Identities=20%  Similarity=0.178  Sum_probs=148.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|+.|++..|+.        +....+...  ...++.++.+|++|.++++++++  
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   74 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV--------EKLEALAAE--LGERVKIFPANLSDRDEVKALGQKA   74 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHH--hCCceEEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999988888765        222222111  12368889999999998887754  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+|+.....     .....+..+++|+.++.++++++.+    .+ .++||++||....++.       
T Consensus        75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  146 (245)
T PRK12936         75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGN-------  146 (245)
T ss_pred             HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCC-------
Confidence                 479999999975431     1122357889999999888887643    33 6799999998655433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|...+.+++.++.+   .++++++++||.+.++.... ..   ......... ..+
T Consensus       147 ---------------~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~-~~---~~~~~~~~~-~~~  206 (245)
T PRK12936        147 ---------------PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGK-LN---DKQKEAIMG-AIP  206 (245)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcc-cC---hHHHHHHhc-CCC
Confidence                           12345999999888888777655   37999999999887653221 11   110111111 111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                           ...+.+++|+++++.+++.....  .| .+++.++
T Consensus       207 -----~~~~~~~~~ia~~~~~l~~~~~~~~~G~~~~~~~g  241 (245)
T PRK12936        207 -----MKRMGTGAEVASAVAYLASSEAAYVTGQTIHVNGG  241 (245)
T ss_pred             -----CCCCcCHHHHHHHHHHHcCccccCcCCCEEEECCC
Confidence                 22467899999999998865432  34 4565554

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.1e-21  Score=158.90  Aligned_cols=215  Identities=20%  Similarity=0.208  Sum_probs=147.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+..        .     .   ...++.++.+|++|.+++.++++  
T Consensus         8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~--------~-----~---~~~~~~~~~~D~~~~~~~~~~~~~~   71 (260)
T PRK06523          8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRP--------D-----D---LPEGVEFVAADLTTAEGCAAVARAV   71 (260)
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChh--------h-----h---cCCceeEEecCCCCHHHHHHHHHHH
Confidence            3589999999999999999999999999999999761        1     0   12367889999999988776653  


Q ss_pred             -----CCCEEEEecccCCC-------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -----GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                           .+|+|||+||....       ...+..+..+++|+.++.++.+++    ++.+ .+++|++||...+...     
T Consensus        72 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~-----  145 (260)
T PRK06523         72 LERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPL-----  145 (260)
T ss_pred             HHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCC-----
Confidence                 47999999996421       112233578899999987776654    4444 5789999997654221     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc-------cHHHHH
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG-------SVRSSL  215 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~-------~~~~~~  215 (285)
                                      ..+...|+.+|.+.+.+++.++.++   |+++++++||.+.+|........       ......
T Consensus       146 ----------------~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  209 (260)
T PRK06523        146 ----------------PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAK  209 (260)
T ss_pred             ----------------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHH
Confidence                            0134569999999999998888664   79999999999998853211000       000000


Q ss_pred             HHHh--cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          216 ALIL--GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       216 ~~~~--~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+.  ....+.     ..+..++|+|.++.+++....  ..| .+.+.++
T Consensus       210 ~~~~~~~~~~p~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg  255 (260)
T PRK06523        210 QIIMDSLGGIPL-----GRPAEPEEVAELIAFLASDRAASITGTEYVIDGG  255 (260)
T ss_pred             HHHHHHhccCcc-----CCCCCHHHHHHHHHHHhCcccccccCceEEecCC
Confidence            0000  011111     246789999999999997542  234 4555553

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.3e-21  Score=158.94  Aligned_cols=214  Identities=20%  Similarity=0.155  Sum_probs=151.1

Q ss_pred             EEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC---CC
Q 023244            9 CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG---CT   84 (285)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d   84 (285)
                      +||||+|+||+.++++|+++|++|++++|+.        +..... .++. ...+++++.+|++|.+++.++++.   +|
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~id   71 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSR--------DRLAAAARALG-GGAPVRTAALDITDEAAVDAFFAEAGPFD   71 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHh-cCCceEEEEccCCCHHHHHHHHHhcCCCC
Confidence            6999999999999999999999999999976        222221 1111 134688899999999999998874   79


Q ss_pred             EEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           85 GVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        85 ~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++||+++.....     ..+..+.++++|+.++.+++++....+ .+++|++||..++...                   
T Consensus        72 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~g~iv~~ss~~~~~~~-------------------  131 (230)
T PRK07041         72 HVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAP-GGSLTFVSGFAAVRPS-------------------  131 (230)
T ss_pred             EEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcC-CeEEEEECchhhcCCC-------------------
Confidence            999999975431     122345889999999999999655444 6899999998765332                   


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDD  238 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  238 (285)
                         ++...|+.+|.+.+.+++.++.+. +++++.++||.+.++................... ..+.     ..+..++|
T Consensus       132 ---~~~~~Y~~sK~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~d  202 (230)
T PRK07041        132 ---ASGVLQGAINAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAE-RLPA-----RRVGQPED  202 (230)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHh-cCCC-----CCCcCHHH
Confidence               334679999999999999988775 6899999999987764221111111111111111 1111     13567899


Q ss_pred             HHHHHHHhhcCCCCCc-eEEEec
Q 023244          239 VARAHIFLLEYPDAKG-RYICSS  260 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~-~~~~~~  260 (285)
                      +|+++.+++.++...| .|++.+
T Consensus       203 va~~~~~l~~~~~~~G~~~~v~g  225 (230)
T PRK07041        203 VANAILFLAANGFTTGSTVLVDG  225 (230)
T ss_pred             HHHHHHHHhcCCCcCCcEEEeCC
Confidence            9999999998654444 466654

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.1e-21  Score=162.07  Aligned_cols=213  Identities=18%  Similarity=0.165  Sum_probs=142.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc-C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA-G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-~   82 (285)
                      +|+||||||||+||++++++|+++|++|++++|+.        .....+.+ ......++.++.+|++|.+++..++. .
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIA--------PQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWD   73 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCC
Confidence            57899999999999999999999999999999976        22222111 11123368889999999999988887 7


Q ss_pred             CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           83 CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        83 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      +|+|||+|+.....     ..+..+..+++|+.++.++.+.    +++.+ .++||++||..+....             
T Consensus        74 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~-------------  139 (257)
T PRK09291         74 VDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITG-------------  139 (257)
T ss_pred             CCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCC-------------
Confidence            99999999975431     1122346788898887766554    44555 5899999997643222             


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-ccc
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLL  229 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  229 (285)
                               +....|+.+|.+.|.+++.++.+   .|++++++|||.+..+................  ....... ...
T Consensus       140 ---------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  208 (257)
T PRK09291        140 ---------PFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPA--RNFTDPEDLAF  208 (257)
T ss_pred             ---------CCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchh--hHHHhhhhhhc
Confidence                     22356999999999988877654   58999999999986543211100000000000  0000000 011


Q ss_pred             CcceeeHHHHHHHHHHhhcCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ...++..+|++..+..++..+
T Consensus       209 ~~~~~~~~~~~~~~~~~l~~~  229 (257)
T PRK09291        209 PLEQFDPQEMIDAMVEVIPAD  229 (257)
T ss_pred             cccCCCHHHHHHHHHHHhcCC
Confidence            235688999999999988754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.89  E-value=2.6e-21  Score=160.55  Aligned_cols=210  Identities=14%  Similarity=0.117  Sum_probs=148.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.        +... ........+.++.++.+|++|.++++++++.
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   80 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQ--------ELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQ   80 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            458899999999999999999999999999998876        2221 1112211234688899999999988887753


Q ss_pred             -------CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           83 -------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 -------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             +|+|||+||....     ...+.....+++|+.+...+.+++.+    .+ .++||++||.....+.      
T Consensus        81 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  153 (265)
T PRK07097         81 IEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGR------  153 (265)
T ss_pred             HHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCC------
Confidence                   7999999998653     12223357788999998877777643    34 6799999997644322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC----ccHHHHHHHHh
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA----GSVRSSLALIL  219 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~----~~~~~~~~~~~  219 (285)
                                      ++...|+.+|.+.+.+++.+++++   |++++.++||.+.++.......    .....+.....
T Consensus       154 ----------------~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (265)
T PRK07097        154 ----------------ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFII  217 (265)
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHH
Confidence                            234569999999999999998775   8999999999999875322100    00000111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .. .+     ...+..++|+|..+.+++...
T Consensus       218 ~~-~~-----~~~~~~~~dva~~~~~l~~~~  242 (265)
T PRK07097        218 AK-TP-----AARWGDPEDLAGPAVFLASDA  242 (265)
T ss_pred             hc-CC-----ccCCcCHHHHHHHHHHHhCcc
Confidence            11 11     125788999999999999764

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.8e-21  Score=160.69  Aligned_cols=228  Identities=13%  Similarity=0.141  Sum_probs=147.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||.++++.|+++|++|+++.++..    ...+.... .+.+...+.++.++.+|++|.+++.++++ 
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSA----ASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD   82 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCc----cchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence            3589999999999999999999999999887776541    11111111 11111123468889999999998887765 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|++||+||....     ...+..+..+++|+.++..+++++.+. ...+++++++|..+....         
T Consensus        83 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~---------  153 (257)
T PRK12744         83 AKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT---------  153 (257)
T ss_pred             HHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC---------
Confidence                  47999999997432     111223578999999999999988654 113567766333222111         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.||++.|.+++.++.+.   |+++++++||.+.++...+............ .....+  
T Consensus       154 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~--  217 (257)
T PRK12744        154 -------------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKT-AAALSP--  217 (257)
T ss_pred             -------------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccc-cccccc--
Confidence                         123569999999999999998775   6999999999998874322111000000000 000001  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC-CCc-eEEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD-AKG-RYICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~-~~~-~~~~~~~  261 (285)
                       .....+.+++|+|.++.+++.... ..| .+++.++
T Consensus       218 -~~~~~~~~~~dva~~~~~l~~~~~~~~g~~~~~~gg  253 (257)
T PRK12744        218 -FSKTGLTDIEDIVPFIRFLVTDGWWITGQTILINGG  253 (257)
T ss_pred             -cccCCCCCHHHHHHHHHHhhcccceeecceEeecCC
Confidence             112358899999999999998532 123 4555543

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.89  E-value=3.4e-21  Score=158.73  Aligned_cols=209  Identities=17%  Similarity=0.138  Sum_probs=148.5

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|+++||||+|+||++++++|+++|++|+++++..      ..+....+...   +.++..+.+|++|.+++.++++ 
T Consensus         8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~------~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~   78 (253)
T PRK08993          8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE------PTETIEQVTAL---GRRFLSLTADLRKIDGIPALLER   78 (253)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc------hHHHHHHHHhc---CCeEEEEECCCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999887754      11222223222   3367889999999988888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||.....     ..+.++..+++|+.++.++++++.+.    ++-+++|++||..++...      
T Consensus        79 ~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  152 (253)
T PRK08993         79 AVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG------  152 (253)
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC------
Confidence                  379999999975431     11234588999999999888887542    223689999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.+|.+.+.+.+.++.+   .|++++.++||.+.++........  ......... ..
T Consensus       153 ----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~--~~~~~~~~~-~~  213 (253)
T PRK08993        153 ----------------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRAD--EQRSAEILD-RI  213 (253)
T ss_pred             ----------------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccc--hHHHHHHHh-cC
Confidence                            12246999999999999888876   489999999999988743211110  000111111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +.     ..+..++|+|..+.+++...
T Consensus       214 p~-----~r~~~p~eva~~~~~l~s~~  235 (253)
T PRK08993        214 PA-----GRWGLPSDLMGPVVFLASSA  235 (253)
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCcc
Confidence            22     25888999999999999754

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.89  E-value=1.8e-21  Score=160.23  Aligned_cols=220  Identities=15%  Similarity=0.176  Sum_probs=150.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |...+++++||||+|+||+.+++.|+++|++|++++|+.        .+... ..+....+.++.++.+|++|.++++++
T Consensus         1 ~~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (253)
T PRK08217          1 MDLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQ--------EKLEEAVAECGALGTEVRGYAANVTDEEDVEAT   72 (253)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence            555678999999999999999999999999999999876        22211 111111234688899999999887776


Q ss_pred             hc-------CCCEEEEecccCCCC--------------CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccc
Q 023244           80 IA-------GCTGVLHVATPVDFE--------------DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSN  134 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~  134 (285)
                      ++       .+|+|||+||.....              ..+.....+++|+.++..+.+.+.    +.....++|++||.
T Consensus        73 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~  152 (253)
T PRK08217         73 FAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI  152 (253)
T ss_pred             HHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc
Confidence            65       369999999964321              112234678899999887765543    33223579999987


Q ss_pred             eeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccH
Q 023244          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSV  211 (285)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~  211 (285)
                      ..+ +.                      ++...|+.+|.+.+.+++.++.+   .+++++.++||.+.++......    
T Consensus       153 ~~~-~~----------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~----  205 (253)
T PRK08217        153 ARA-GN----------------------MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMK----  205 (253)
T ss_pred             ccc-CC----------------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC----
Confidence            543 21                      22356999999999999888765   4899999999999887542211    


Q ss_pred             HHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 023244          212 RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSH  261 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  261 (285)
                      ......... ..++     ..+.+++|+|+++.+++......| +++++++
T Consensus       206 ~~~~~~~~~-~~~~-----~~~~~~~~~a~~~~~l~~~~~~~g~~~~~~gg  250 (253)
T PRK08217        206 PEALERLEK-MIPV-----GRLGEPEEIAHTVRFIIENDYVTGRVLEIDGG  250 (253)
T ss_pred             HHHHHHHHh-cCCc-----CCCcCHHHHHHHHHHHHcCCCcCCcEEEeCCC
Confidence            111111111 1122     257899999999999997644344 4665553

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.4e-21  Score=160.10  Aligned_cols=215  Identities=14%  Similarity=0.144  Sum_probs=150.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +....+. .+.....++.++.+|+++.+++.++++ 
T Consensus         8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   79 (258)
T PRK06949          8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRV--------ERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH   79 (258)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        2322221 111113468889999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----C-------CccEEEEeccceeeec
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----G-------TVKRVVYTSSNAAVFY  139 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-------~~~~~v~~SS~~~~~~  139 (285)
                            .+|++||+|+.....     ..+..+.++++|+.++.++++++...    .       ..+++|++||..++..
T Consensus        80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~  159 (258)
T PRK06949         80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV  159 (258)
T ss_pred             HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence                  479999999975431     11223578899999999888876532    1       0258999999875422


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~  216 (285)
                      .                      +...+|+.+|.+.+.+++.++.+   .++++++++||.+++|........  .. ..
T Consensus       160 ~----------------------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~-~~  214 (258)
T PRK06949        160 L----------------------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWET--EQ-GQ  214 (258)
T ss_pred             C----------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccCh--HH-HH
Confidence            1                      23457999999999999888766   489999999999999864321111  10 11


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYI  257 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  257 (285)
                      ..... .+     ...+...+|+++.+.+++....  ..|.+.
T Consensus       215 ~~~~~-~~-----~~~~~~p~~~~~~~~~l~~~~~~~~~G~~i  251 (258)
T PRK06949        215 KLVSM-LP-----RKRVGKPEDLDGLLLLLAADESQFINGAII  251 (258)
T ss_pred             HHHhc-CC-----CCCCcCHHHHHHHHHHHhChhhcCCCCcEE
Confidence            11111 11     1257889999999999987533  245443

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.89  E-value=8.8e-21  Score=154.41  Aligned_cols=197  Identities=19%  Similarity=0.174  Sum_probs=140.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+|+||||+|+||++++++|+++|++|++++|+..        .     ..     ...++.+|++|.+++.++++   
T Consensus         3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~--------~-----~~-----~~~~~~~D~~~~~~~~~~~~~~~   64 (234)
T PRK07577          3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAI--------D-----DF-----PGELFACDLADIEQTAATLAQIN   64 (234)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcc--------c-----cc-----CceEEEeeCCCHHHHHHHHHHHH
Confidence            578999999999999999999999999999999872        1     01     12467899999998887775   


Q ss_pred             ---CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                         ++|+|||+++.....     ..+.....++.|+.++.++.+++    ++.+ .+++|++||...++ .         
T Consensus        65 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~-~---------  133 (234)
T PRK07577         65 EIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRAIFG-A---------  133 (234)
T ss_pred             HhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccccccC-C---------
Confidence               479999999986542     11223467889999987776665    3445 67999999986432 1         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.+|...+.+++.++.+   .|++++++|||.+.++......+.. .......... .+. 
T Consensus       134 -------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~-~~~~~~~~~~-~~~-  197 (234)
T PRK07577        134 -------------LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVG-SEEEKRVLAS-IPM-  197 (234)
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccc-hhHHHHHhhc-CCC-
Confidence                         12356999999999998887755   3899999999999887532211111 1111111111 111 


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                          ..+..++|+|.++.+++..+
T Consensus       198 ----~~~~~~~~~a~~~~~l~~~~  217 (234)
T PRK07577        198 ----RRLGTPEEVAAAIAFLLSDD  217 (234)
T ss_pred             ----CCCcCHHHHHHHHHHHhCcc
Confidence                13568899999999999765

>PRK12742 oxidoreductase; Provisional

Probab=99.89  E-value=5.5e-21  Score=155.92  Aligned_cols=203  Identities=14%  Similarity=0.085  Sum_probs=143.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+||||||+|+||++++++|+++|++|+++.++.+       +....+ .+.     ++.++.+|++|.+.+.+.++.
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~l~~~~-----~~~~~~~D~~~~~~~~~~~~~   72 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK-------DAAERLAQET-----GATAVQTDSADRDAVIDVVRK   72 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCH-------HHHHHHHHHh-----CCeEEecCCCCHHHHHHHHHH
Confidence            3589999999999999999999999999988776431       222222 121     356788999999888777753


Q ss_pred             ---CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           83 ---CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        83 ---~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                         +|++||+||.....     ..+..+..+++|+.++..++..+.+. ...+++|++||.......             
T Consensus        73 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-------------  139 (237)
T PRK12742         73 SGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP-------------  139 (237)
T ss_pred             hCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC-------------
Confidence               79999999875431     11233588999999999987766554 224699999997542111             


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                              .++...|+.+|.+.|.+++.++.++   |+++++++||.+.++......  ..   ...... ..++     
T Consensus       140 --------~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~---~~~~~~-~~~~-----  200 (237)
T PRK12742        140 --------VAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG--PM---KDMMHS-FMAI-----  200 (237)
T ss_pred             --------CCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc--HH---HHHHHh-cCCC-----
Confidence                    1234569999999999998887663   799999999999887532211  01   111111 1112     


Q ss_pred             cceeeHHHHHHHHHHhhcCC
Q 023244          231 TSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+..++|+++++.+++...
T Consensus       201 ~~~~~p~~~a~~~~~l~s~~  220 (237)
T PRK12742        201 KRHGRPEEVAGMVAWLAGPE  220 (237)
T ss_pred             CCCCCHHHHHHHHHHHcCcc
Confidence            25789999999999999754

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.3e-21  Score=158.14  Aligned_cols=198  Identities=20%  Similarity=0.223  Sum_probs=144.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++++|+||||||+||++++++|+++|++|++++|++        +.... ..++... .+++++.+|++|.+++.+.++ 
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~   75 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQ--------KELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDA   75 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCH--------HHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999976        22222 2222111 468899999999998877775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+++.....     ..+.....+++|+.++.++++++.+.  ...+++|++||.......        
T Consensus        76 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------  147 (237)
T PRK07326         76 IVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFF--------  147 (237)
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCC--------
Confidence                  589999999875431     11223477899999999988887643  125789999997653221        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    .....|+.+|++.+.+.+.++.+   .|++++++|||.+.++...... .           ..  .
T Consensus       148 --------------~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~-~-----------~~--~  199 (237)
T PRK07326        148 --------------AGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP-S-----------EK--D  199 (237)
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc-c-----------hh--h
Confidence                          12356999999999888887644   4899999999999876421110 0           00  0


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                           ...+..+|+++++.+++..+.
T Consensus       200 -----~~~~~~~d~a~~~~~~l~~~~  220 (237)
T PRK07326        200 -----AWKIQPEDIAQLVLDLLKMPP  220 (237)
T ss_pred             -----hccCCHHHHHHHHHHHHhCCc
Confidence                 023789999999999998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.89  E-value=2e-21  Score=159.41  Aligned_cols=207  Identities=15%  Similarity=0.174  Sum_probs=143.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||||+||+.++++|+++|++|+++.+..      .......+.+....+.++..+.+|++|.+++.++++   
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPN------SPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVK   76 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCC------hHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            57899999999999999999999999988865432      012222233222223467788999999988877765   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+|+.....     ..+..+.++++|+.++..+.+++    ++.+ .+++|++||.....+.        
T Consensus        77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~--------  147 (246)
T PRK12938         77 AEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ--------  147 (246)
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCC--------
Confidence                479999999975431     11223578899999977766654    3444 6799999997643222        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    ++...|+.+|.+.+.+++.++++   .|+++++++||.+.+|......    .......... .+ 
T Consensus       148 --------------~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~----~~~~~~~~~~-~~-  207 (246)
T PRK12938        148 --------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR----PDVLEKIVAT-IP-  207 (246)
T ss_pred             --------------CCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC----hHHHHHHHhc-CC-
Confidence                          23456999999998888887765   4799999999999887532211    1111111111 11 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                          ...+..++|++.++.+++...
T Consensus       208 ----~~~~~~~~~v~~~~~~l~~~~  228 (246)
T PRK12938        208 ----VRRLGSPDEIGSIVAWLASEE  228 (246)
T ss_pred             ----ccCCcCHHHHHHHHHHHcCcc
Confidence                124678999999999998654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.9e-21  Score=160.02  Aligned_cols=211  Identities=19%  Similarity=0.165  Sum_probs=146.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        ............+.++.++.+|+++.++++++++  
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   76 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISP--------EIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRA   76 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            358999999999999999999999999999999875        2212212111123467889999999998888765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .+++|++||.......       
T Consensus        77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~-------  148 (263)
T PRK08226         77 KEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVA-------  148 (263)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccC-------
Confidence                 469999999975431     1122346789999999998888654    23 5689999996542111       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----CCccHHHHHHHHhc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----FAGSVRSSLALILG  220 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----~~~~~~~~~~~~~~  220 (285)
                                    .+....|+.+|...+.+++.++.++   +++++.++||.+.++.....    .+.........+..
T Consensus       149 --------------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  214 (263)
T PRK08226        149 --------------DPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAK  214 (263)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhc
Confidence                          0223569999999999999888764   79999999999988742211    00111111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                       ..++     ..+..++|+|+++.+++...
T Consensus       215 -~~p~-----~~~~~~~~va~~~~~l~~~~  238 (263)
T PRK08226        215 -AIPL-----RRLADPLEVGELAAFLASDE  238 (263)
T ss_pred             -cCCC-----CCCCCHHHHHHHHHHHcCch
Confidence             1122     25679999999999998643

>PRK08324 short chain dehydrogenase; Validated

Probab=99.89  E-value=1.6e-21  Score=180.96  Aligned_cols=223  Identities=22%  Similarity=0.168  Sum_probs=154.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|++|||||+|+||+.+++.|+++|++|++++|+.        +..... ..+... .++.++.+|++|.+++.++++  
T Consensus       422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~--------~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~  492 (681)
T PRK08324        422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDE--------EAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEA  492 (681)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCH--------HHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHH
Confidence            58999999999999999999999999999999987        222221 112111 478889999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           ++|+|||+||.....     ..+.....+++|+.++.++++++.    +.+..++||++||..++.+.       
T Consensus       493 ~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~-------  565 (681)
T PRK08324        493 ALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG-------  565 (681)
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC-------
Confidence                 479999999975431     112235788999999999977664    33412799999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCcee-cCCCCCCCCccHHHHHHHHhcCcc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVV-GPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     +....|+.+|.+.+.+++.++.+.   |+++++++|+.+| ++...........   ....+...
T Consensus       566 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~---~~~~g~~~  627 (681)
T PRK08324        566 ---------------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEAR---AAAYGLSE  627 (681)
T ss_pred             ---------------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhh---hhhccCCh
Confidence                           234579999999999999988765   6999999999998 5543221100000   00000000


Q ss_pred             -----ccc-cccCcceeeHHHHHHHHHHhhc--CCCCCc-eEEEecc
Q 023244          224 -----EYG-FLLNTSMVHVDDVARAHIFLLE--YPDAKG-RYICSSH  261 (285)
Q Consensus       224 -----~~~-~~~~~~~i~~~D~a~~~~~~~~--~~~~~~-~~~~~~~  261 (285)
                           .+. ....+.+++++|+|+++.+++.  .....| +++++++
T Consensus       628 ~~~~~~~~~~~~l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG  674 (681)
T PRK08324        628 EELEEFYRARNLLKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGG  674 (681)
T ss_pred             HHHHHHHHhcCCcCCccCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence                 011 1224579999999999999984  333344 5676554

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.89  E-value=3.2e-21  Score=158.40  Aligned_cols=195  Identities=16%  Similarity=0.145  Sum_probs=144.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCC--CCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|++        +....+. .+.  ..+.++.++.+|++|.+++.++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   73 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRT--------DRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFA   73 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHH
Confidence            57899999999999999999999999999999986        2222211 111  113468889999999988877665


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||.....     ..+.....+++|+.+..++++++.    +.+ .+++|++||.....+.+    
T Consensus        74 ~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  148 (248)
T PRK08251         74 EFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLP----  148 (248)
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCC----
Confidence                   479999999975542     112224678999999988888764    344 67999999977543321    


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       .+...|+.||.+.+.+++.++.++   ++++++++||.+.++.....             +. 
T Consensus       149 -----------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~-------------~~-  197 (248)
T PRK08251        149 -----------------GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA-------------KS-  197 (248)
T ss_pred             -----------------CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc-------------cc-
Confidence                             123569999999999988887664   79999999999987642110             00 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                             ....++.+|.|+.++.++++.
T Consensus       198 -------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        198 -------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             -------CCccCCHHHHHHHHHHHHhcC
Confidence                   013588999999999999854

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.88  E-value=5.4e-21  Score=157.82  Aligned_cols=225  Identities=16%  Similarity=0.114  Sum_probs=150.5

Q ss_pred             CCCCCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCcccc----CccchhhhhcCCCCCCCEEEEecCCCChh
Q 023244            1 MEEGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHR----NSKDLSFLKNLPGASERLRIFHADLSHPD   74 (285)
Q Consensus         1 M~~~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   74 (285)
                      |..++|+|+||||||  .||..++++|+++|++|++++|++.....+    ..+...........+.++.++.+|+++.+
T Consensus         1 ~~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          1 LPLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            566678999999995  799999999999999999999873110000    00111111111122346889999999998


Q ss_pred             hHHHHhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeec
Q 023244           75 GFDAAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFY  139 (285)
Q Consensus        75 ~~~~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~  139 (285)
                      ++..+++       .+|+|||+|+.....     ..+..+..+++|+.++.++++++...   ...+++|++||..++.+
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            8777664       369999999975431     11123477899999999999987643   11468999999765432


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~  216 (285)
                      .                      +....|+.+|++.+.+++.++.+   .+++++.++||.+.++.....       ...
T Consensus       161 ~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~-------~~~  211 (256)
T PRK12748        161 M----------------------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEE-------LKH  211 (256)
T ss_pred             C----------------------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChh-------HHH
Confidence            2                      12356999999999999888766   389999999999877642211       111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSS  260 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  260 (285)
                      ..... .+     ...+..++|+++.+.+++....  ..|. +++.+
T Consensus       212 ~~~~~-~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  252 (256)
T PRK12748        212 HLVPK-FP-----QGRVGEPVDAARLIAFLVSEEAKWITGQVIHSEG  252 (256)
T ss_pred             hhhcc-CC-----CCCCcCHHHHHHHHHHHhCcccccccCCEEEecC
Confidence            11111 11     1135678999999999887533  2344 45544

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4e-21  Score=159.27  Aligned_cols=209  Identities=17%  Similarity=0.129  Sum_probs=144.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +..... .++.....++.++.+|++|.+++.+++++
T Consensus         8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~   79 (264)
T PRK07576          8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQ--------EKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQ   79 (264)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence            457999999999999999999999999999999976        222111 11111123677889999999988877653


Q ss_pred             -------CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           83 -------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        83 -------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                             +|+|||+|+....     ...+.....+++|+.++.++++++.+.  ...+++|++||..+....        
T Consensus        80 ~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~--------  151 (264)
T PRK07576         80 IADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPM--------  151 (264)
T ss_pred             HHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCC--------
Confidence                   6999999985432     112223477889999999999887643  113699999997654221        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecC-CCCCCCCccHHHHHHHHhcCccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP-FICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~-~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                    +....|+.+|.+.+.+++.++.+   .|+++++++||.+.+. ......+..  ........ ..+
T Consensus       152 --------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~--~~~~~~~~-~~~  214 (264)
T PRK07576        152 --------------PMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSP--ELQAAVAQ-SVP  214 (264)
T ss_pred             --------------CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCH--HHHHHHHh-cCC
Confidence                          23457999999999999988766   3799999999998752 211111110  11111111 111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +     ..+..++|+|+++++++...
T Consensus       215 ~-----~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        215 L-----KRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             C-----CCCCCHHHHHHHHHHHcChh
Confidence            2     25788999999999999753

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.88  E-value=2.4e-21  Score=158.15  Aligned_cols=216  Identities=17%  Similarity=0.168  Sum_probs=149.0

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-----
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-----   82 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----   82 (285)
                      |+|||++|+||++++++|+++|++|++++|+..      .............+.++.++.+|++|.+++++++++     
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSE------EGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEEL   74 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCch------hHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999988651      011111111212233688999999999988887653     


Q ss_pred             --CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           83 --CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        83 --~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                        +|+|||++|.....     .....+..++.|+.++.++++.+.+.   ...++||++||...+++.            
T Consensus        75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~------------  142 (239)
T TIGR01830        75 GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGN------------  142 (239)
T ss_pred             CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCC------------
Confidence              69999999975431     11223578899999999999988653   125699999997655443            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL  229 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                +....|+.+|.+.+.+++.++++   .|++++++|||.+.++.... ...   ......... .++    
T Consensus       143 ----------~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~-~~~---~~~~~~~~~-~~~----  203 (239)
T TIGR01830       143 ----------AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDK-LSE---KVKKKILSQ-IPL----  203 (239)
T ss_pred             ----------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhh-cCh---HHHHHHHhc-CCc----
Confidence                      22356999999999888887765   48999999999987653221 111   111111111 111    


Q ss_pred             CcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          230 NTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       ..+.+++|++.+++.++....  ..| +|+++++
T Consensus       204 -~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       204 -GRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             -CCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence             247899999999999985432  234 5676554

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.1e-21  Score=159.37  Aligned_cols=223  Identities=17%  Similarity=0.227  Sum_probs=149.3

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..++|+++||||+|+||++++++|+++|++|++++|+................++...+.++.++.+|+++.+++..+++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            34568999999999999999999999999999999976210000000001111111123468889999999998887765


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.   ..-.++|++||.......      
T Consensus        83 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~------  156 (273)
T PRK08278         83 KAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPK------  156 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhcccc------
Confidence                   579999999975431     11223578889999999999998643   113689999985421100      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCc-eecCCCCCCCCccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSM-VVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~-v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                           +         .++...|+.||.+.|.+++.++.++   +++++.+.|+. +.++....            ..+..
T Consensus       157 -----~---------~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~------------~~~~~  210 (273)
T PRK08278        157 -----W---------FAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN------------LLGGD  210 (273)
T ss_pred             -----c---------cCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh------------ccccc
Confidence                 0         0234679999999999999988775   79999999984 44431100            01111


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCceEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~~~  261 (285)
                      ...     ..+..++|+|+.+++++....  ..|.+...++
T Consensus       211 ~~~-----~~~~~p~~va~~~~~l~~~~~~~~~G~~~~~~~  246 (273)
T PRK08278        211 EAM-----RRSRTPEIMADAAYEILSRPAREFTGNFLIDEE  246 (273)
T ss_pred             ccc-----cccCCHHHHHHHHHHHhcCccccceeEEEeccc
Confidence            111     246899999999999997643  3455555443

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.88  E-value=5.5e-21  Score=160.94  Aligned_cols=210  Identities=21%  Similarity=0.128  Sum_probs=148.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||..+++.|+++|++|++++|+.        +....+ .++. ....+..+.+|++|.+++.++++ 
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~l~~~~~~l~-~~~~~~~~~~Dv~d~~~v~~~~~~   78 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE--------AELAALAAELG-GDDRVLTVVADVTDLAAMQAAAEE   78 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhc-CCCcEEEEEecCCCHHHHHHHHHH
Confidence            358999999999999999999999999999999976        332222 2222 12356667799999988877764 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.  ...++||++||...+...        
T Consensus        79 ~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--------  150 (296)
T PRK05872         79 AVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA--------  150 (296)
T ss_pred             HHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC--------
Confidence                  479999999975431     11223578999999999999887542  113689999998765332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.||...+.+.+.++.+   .|++++++.||.+.++........ ...........+.+.
T Consensus       151 --------------~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~-~~~~~~~~~~~~~p~  215 (296)
T PRK05872        151 --------------PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD-LPAFRELRARLPWPL  215 (296)
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc-chhHHHHHhhCCCcc
Confidence                          23457999999999999888755   489999999999988743221111 011111111111122


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                           ..++.++|+++.+.+++.+.
T Consensus       216 -----~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        216 -----RRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             -----cCCCCHHHHHHHHHHHHhcC
Confidence                 25789999999999999865

>PRK08339 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.3e-21  Score=159.61  Aligned_cols=210  Identities=13%  Similarity=0.084  Sum_probs=144.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+|.||++++++|+++|++|++++|+.        +....+ .++.. .+.++.++.+|++|.++++++++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~   78 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNE--------ENLKKAREKIKSESNVDVSYIVADLTKREDLERTVK   78 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            468899999999999999999999999999999976        222211 11111 13468899999999998888776


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||.....     ..+.++..+++|+.+...+.++    +++.+ .+++|++||.....+.      
T Consensus        79 ~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~------  151 (263)
T PRK08339         79 ELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPI------  151 (263)
T ss_pred             HHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCC------
Confidence                  379999999874321     1122357888998876655544    44454 5799999998754222      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC-------ccHHHHHH
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA-------GSVRSSLA  216 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~~~  216 (285)
                                      +....|+.+|.+.+.+.+.++.+.   |++++.+.||.+.++.......       ........
T Consensus       152 ----------------~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  215 (263)
T PRK08339        152 ----------------PNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQ  215 (263)
T ss_pred             ----------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHH
Confidence                            223569999999999998888774   7999999999998763211000       00001111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .. ....+.     ..+..++|+|.++.+++...
T Consensus       216 ~~-~~~~p~-----~r~~~p~dva~~v~fL~s~~  243 (263)
T PRK08339        216 EY-AKPIPL-----GRLGEPEEIGYLVAFLASDL  243 (263)
T ss_pred             HH-hccCCc-----ccCcCHHHHHHHHHHHhcch
Confidence            11 111122     25788999999999999754

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.4e-21  Score=161.84  Aligned_cols=198  Identities=18%  Similarity=0.163  Sum_probs=143.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +....+. .......++.++.+|++|.+++.++++ 
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~--------~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  110 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARRE--------DLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVAD  110 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            458899999999999999999999999999999986        2222211 111113367889999999998888876 


Q ss_pred             ------CCCEEEEecccCCCCC-----C--ChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDFED-----K--EPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~~-----~--~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||......     .  +..+..+++|+.+..++++++.    +.+ .+++|++||.+++...    
T Consensus       111 ~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  185 (293)
T PRK05866        111 VEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEA----  185 (293)
T ss_pred             HHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC----
Confidence                  5899999999754310     1  1224678999999888777653    455 6799999997543211    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                       .+....|+.+|++.+.+++.++.+.   |+++++++||.+-++......           ...
T Consensus       186 -----------------~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~-----------~~~  237 (293)
T PRK05866        186 -----------------SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTK-----------AYD  237 (293)
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccc-----------ccc
Confidence                             0223569999999999988887664   899999999998776422100           000


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                              ....+.++++|+.++.+++++
T Consensus       238 --------~~~~~~pe~vA~~~~~~~~~~  258 (293)
T PRK05866        238 --------GLPALTADEAAEWMVTAARTR  258 (293)
T ss_pred             --------CCCCCCHHHHHHHHHHHHhcC
Confidence                    013478999999999999864

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.88  E-value=3.1e-21  Score=158.01  Aligned_cols=195  Identities=15%  Similarity=0.120  Sum_probs=143.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCC-CCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP-GASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ||+|+||||||+||.++++.|+++|++|++++|+.        +.... .++.. ....++.++.+|++|.+++.++++.
T Consensus         1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~   72 (243)
T PRK07102          1 MKKILIIGATSDIARACARRYAAAGARLYLAARDV--------ERLERLADDLRARGAVAVSTHELDILDTASHAAFLDS   72 (243)
T ss_pred             CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCH--------HHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHH
Confidence            46899999999999999999999999999999986        22211 11111 1234788999999999988887763


Q ss_pred             ----CCEEEEecccCCCC---CCC--hHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccccc
Q 023244           83 ----CTGVLHVATPVDFE---DKE--PEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        83 ----~d~vih~a~~~~~~---~~~--~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                          +|.|||++|.....   ..+  .....+++|+.++.++++++.+    .+ .+++|++||.....+.         
T Consensus        73 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---------  142 (243)
T PRK07102         73 LPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGR---------  142 (243)
T ss_pred             HhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCC---------
Confidence                69999999875431   111  1236788999999999888764    34 6799999997643221         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.+|...+.+.+.++.+   .|+++++++||.++++.....             ..+    
T Consensus       143 -------------~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~~----  192 (243)
T PRK07102        143 -------------ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KLP----  192 (243)
T ss_pred             -------------CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CCC----
Confidence                         12346999999999998888654   489999999999998732110             000    


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                         ...++.++|+++.++.++.++
T Consensus       193 ---~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        193 ---GPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             ---ccccCCHHHHHHHHHHHHhCC
Confidence               013578999999999999864

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.88  E-value=2.5e-21  Score=164.73  Aligned_cols=204  Identities=15%  Similarity=0.131  Sum_probs=145.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||||+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.++++++++ 
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~--------~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~   77 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDE--------EALQAVAEECRALGAEVLVVPTDVTDADQVKALATQ   77 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        222221 2221223467888999999998888774 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||.....     ..+..+..+++|+.++.++.+++    ++.+ ..++|++||...+...      
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~------  150 (330)
T PRK06139         78 AASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQ------  150 (330)
T ss_pred             HHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCC------
Confidence                  479999999975431     11223478999999988877665    3444 5789999998754332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      +....|+.||.+.+.+.+.++.+    .+++++.+.||.+.+|.......         ..+..
T Consensus       151 ----------------p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~---------~~~~~  205 (330)
T PRK06139        151 ----------------PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGAN---------YTGRR  205 (330)
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccc---------ccccc
Confidence                            23457999999877777776655    37999999999999885322100         00100


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .    .....+++++|+|++++.+++++.
T Consensus       206 ~----~~~~~~~~pe~vA~~il~~~~~~~  230 (330)
T PRK06139        206 L----TPPPPVYDPRRVAKAVVRLADRPR  230 (330)
T ss_pred             c----cCCCCCCCHHHHHHHHHHHHhCCC
Confidence            0    011246799999999999998764

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.6e-21  Score=157.21  Aligned_cols=205  Identities=18%  Similarity=0.147  Sum_probs=141.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+|+||||+|+||.+++++|+++|++|++++|+.        ..... ..+.     ...++.+|++|.++++++++ 
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~   72 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDP--------EAGKAAADEV-----GGLFVPTDVTDEDAVNALFDT   72 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHc-----CCcEEEeeCCCHHHHHHHHHH
Confidence            368999999999999999999999999999999976        22221 1222     12578899999998888776 


Q ss_pred             ------CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||.....       ..+..+..+++|+.++..+++.+.    +.+ .+++|++||.....+..   
T Consensus        73 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~---  148 (255)
T PRK06057         73 AAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSA---  148 (255)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCC---
Confidence                  469999999875321       112235788999999887777654    344 56899999865433220   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .+...|+.+|++.+.+.+.++.+   .|++++++|||.+.+|..................  
T Consensus       149 ------------------~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~--  208 (255)
T PRK06057        149 ------------------TSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLV--  208 (255)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHh--
Confidence                              12346999998777777665543   3899999999999988533221111111111111  


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+     ...+.+++|+++++.+++...
T Consensus       209 ~~~-----~~~~~~~~~~a~~~~~l~~~~  232 (255)
T PRK06057        209 HVP-----MGRFAEPEEIAAAVAFLASDD  232 (255)
T ss_pred             cCC-----CCCCcCHHHHHHHHHHHhCcc
Confidence            111     126899999999999988654

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.88  E-value=6.7e-21  Score=156.85  Aligned_cols=197  Identities=13%  Similarity=0.106  Sum_probs=139.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhh-hhcCCC-CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSF-LKNLPG-ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..|+|+||||||+||++++++|+++| ++|++++|+..       ..... .+++.. ...+++++.+|++|.+++.+++
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~-------~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~   79 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDD-------PRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVI   79 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcc-------hhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHH
Confidence            35789999999999999999999985 89999999871       11111 111211 1236889999999988766555


Q ss_pred             c------CCCEEEEecccCCCC---CCCh--HHHHHHHHHHHHHH----HHHHHHhcCCccEEEEeccceeeeccCCCCc
Q 023244           81 A------GCTGVLHVATPVDFE---DKEP--EEVITQRAINGTLG----ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        81 ~------~~d~vih~a~~~~~~---~~~~--~~~~~~~n~~~~~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +      .+|++||++|.....   ..++  ..+.+++|+.++..    +++.+++.+ .++||++||..+....     
T Consensus        80 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~-----  153 (253)
T PRK07904         80 DAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVR-----  153 (253)
T ss_pred             HHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCC-----
Confidence            4      589999999886431   1111  12468999988776    566666666 6899999998643211     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||++...+.+.++.+   .++++++++||.+.++.....              ..
T Consensus       154 -----------------~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~--------------~~  202 (253)
T PRK07904        154 -----------------RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA--------------KE  202 (253)
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC--------------CC
Confidence                             22346999999988777666544   589999999999988632110              00


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .  +     ..+..+|+|+.++..+.++.
T Consensus       203 ~--~-----~~~~~~~~A~~i~~~~~~~~  224 (253)
T PRK07904        203 A--P-----LTVDKEDVAKLAVTAVAKGK  224 (253)
T ss_pred             C--C-----CCCCHHHHHHHHHHHHHcCC
Confidence            0  0     24789999999999998653

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=99.88  E-value=8.7e-22  Score=152.84  Aligned_cols=256  Identities=19%  Similarity=0.166  Sum_probs=184.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +|..||||-||.=|++|++.|+.+|++|.++.|++   +.-+..+..++-.-|.  .+....++.+|++|...+.+++..
T Consensus        28 rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRs---SsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~  104 (376)
T KOG1372|consen   28 RKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRS---SSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST  104 (376)
T ss_pred             ceEEEEecccCCCchHHHHHHHhCCceeeEEEeec---cccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc
Confidence            46799999999999999999999999999999876   1123334444433333  356788999999999999999874


Q ss_pred             --CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           83 --CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        83 --~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                        ++-|+|+|++.+.  +.+-+ +.+-++...|+..|+++++.++  +.-||-..||..-|+  .-...|..|.+|.   
T Consensus       105 ikPtEiYnLaAQSHVkvSFdlp-eYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyG--kv~e~PQsE~TPF---  178 (376)
T KOG1372|consen  105 IKPTEVYNLAAQSHVKVSFDLP-EYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYG--KVQEIPQSETTPF---  178 (376)
T ss_pred             cCchhhhhhhhhcceEEEeecc-cceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcc--cccCCCcccCCCC---
Confidence              7999999999776  33444 3667778889999999999986  122566666665443  2345677888874   


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccH-----HHHHHHHhcCccccc---cc
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSV-----RSSLALILGNREEYG---FL  228 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~  228 (285)
                            .|+++|+.+|..+-.++..+...+++-.+-   |.+|-...+.....++     ....+...+....+.   .+
T Consensus       179 ------yPRSPYa~aKmy~~WivvNyREAYnmfAcN---GILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~  249 (376)
T KOG1372|consen  179 ------YPRSPYAAAKMYGYWIVVNYREAYNMFACN---GILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLS  249 (376)
T ss_pred             ------CCCChhHHhhhhheEEEEEhHHhhcceeec---cEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchh
Confidence                  578999999999988888877777764443   4444322111111121     112222233333332   27


Q ss_pred             cCcceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          229 LNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +.|||-|..|.+++++.++++..+....+.+++..|++|+++..-..+|+
T Consensus       250 a~RDWGhA~dYVEAMW~mLQ~d~PdDfViATge~hsVrEF~~~aF~~ig~  299 (376)
T KOG1372|consen  250 ALRDWGHAGDYVEAMWLMLQQDSPDDFVIATGEQHSVREFCNLAFAEIGE  299 (376)
T ss_pred             hhcccchhHHHHHHHHHHHhcCCCCceEEecCCcccHHHHHHHHHHhhCc
Confidence            78999999999999999999887766667889999999999987776664

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.88  E-value=4.2e-21  Score=159.07  Aligned_cols=205  Identities=23%  Similarity=0.210  Sum_probs=147.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++++++||||+|+||+.++++|+++|++|++++|+.        +....+ .++ ....++.++.+|++|.+++..+
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~   71 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNA--------EKLEALAARL-PYPGRHRWVVADLTSEAGREAV   71 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHH-hcCCceEEEEccCCCHHHHHHH
Confidence            565678999999999999999999999999999999976        222222 222 1234788999999999988777


Q ss_pred             hc------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCc
Q 023244           80 IA------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        80 ~~------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      ++      .+|+|||+||.....     ..+.....+++|+.++.++++.+.+.   ...+++|++||.....+.     
T Consensus        72 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  146 (263)
T PRK09072         72 LARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGY-----  146 (263)
T ss_pred             HHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCC-----
Confidence            65      479999999975431     11223577889999999998887542   114689999987654322     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|.+.+.+++.++.++   +++++++.||.+.++......        .....  
T Consensus       147 -----------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~--------~~~~~--  199 (263)
T PRK09072        147 -----------------PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV--------QALNR--  199 (263)
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc--------ccccc--
Confidence                             223569999999998888887663   799999999998775321100        00000  


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                           .....+..++|+|+.+++++++..
T Consensus       200 -----~~~~~~~~~~~va~~i~~~~~~~~  223 (263)
T PRK09072        200 -----ALGNAMDDPEDVAAAVLQAIEKER  223 (263)
T ss_pred             -----cccCCCCCHHHHHHHHHHHHhCCC
Confidence                 001146789999999999998753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.88  E-value=2.3e-21  Score=160.55  Aligned_cols=212  Identities=21%  Similarity=0.223  Sum_probs=148.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+++||||||+||++++++|+++|++|++++|+.        +....+...  ...++.++.+|++|.+++.+++
T Consensus         1 m~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~   70 (262)
T TIGR03325         1 MRLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSA--------AGLQELEAA--HGDAVVGVEGDVRSLDDHKEAV   70 (262)
T ss_pred             CCcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhh--cCCceEEEEeccCCHHHHHHHH
Confidence            665678999999999999999999999999999999876        333333221  1236888999999998777766


Q ss_pred             c-------CCCEEEEecccCCC-------CCC---ChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccC
Q 023244           81 A-------GCTGVLHVATPVDF-------EDK---EPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~-------~~~---~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~  141 (285)
                      +       .+|++||+||....       +.+   +.++..+++|+.++..+++++.+.  ...+++|++||...+... 
T Consensus        71 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~-  149 (262)
T TIGR03325        71 ARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPN-  149 (262)
T ss_pred             HHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCC-
Confidence            4       47999999986431       111   123478999999999999988653  112579999987654322 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCC-C--Cc-cHHH--
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPK-F--AG-SVRS--  213 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~-~--~~-~~~~--  213 (285)
                                           +....|+.+|.+.+.+++.++.++  .++++.+.||.+.++..... .  .. ....  
T Consensus       150 ---------------------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~  208 (262)
T TIGR03325       150 ---------------------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVP  208 (262)
T ss_pred             ---------------------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccc
Confidence                                 223469999999999999998875  38999999999988743211 0  00 0000  


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ...... ...+.     ..+..++|+|+++.+++...
T Consensus       209 ~~~~~~-~~~p~-----~r~~~p~eva~~~~~l~s~~  239 (262)
T TIGR03325       209 LGDMLK-SVLPI-----GRMPDAEEYTGAYVFFATRG  239 (262)
T ss_pred             hhhhhh-hcCCC-----CCCCChHHhhhheeeeecCC
Confidence            001111 11122     26788999999999998753

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK09242 tropinone reductase; Provisional

Probab=99.88  E-value=1.5e-20  Score=155.31  Aligned_cols=208  Identities=15%  Similarity=0.151  Sum_probs=148.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+++||||+|+||+.++++|+++|++|++++|+.        +....+ .++..  .+.++.++.+|+++.+++.+++
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDA--------DALAQARDELAEEFPEREVHGLAADVSDDEDRRAIL   79 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            468999999999999999999999999999999976        222111 11111  1347888999999998877766


Q ss_pred             c-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||....     ...+..+..+++|+.++.++++++.+    .+ .+++|++||..++...    
T Consensus        80 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~----  154 (257)
T PRK09242         80 DWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHV----  154 (257)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCC----
Confidence            4       46999999997432     11222357899999999999888743    34 5799999998754332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.+|.+.+.+++.++.+.   |++++.++||.+.++........  ......... 
T Consensus       155 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~--~~~~~~~~~-  213 (257)
T PRK09242        155 ------------------RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSD--PDYYEQVIE-  213 (257)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCC--hHHHHHHHh-
Confidence                              233569999999999999887653   89999999999998864322111  111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..++     ..+...+|++.++.+++...
T Consensus       214 ~~~~-----~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        214 RTPM-----RRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence            1112     14678899999999999653

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.88  E-value=1.3e-20  Score=153.71  Aligned_cols=210  Identities=17%  Similarity=0.144  Sum_probs=145.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|++|||||+|+||++++++|+++|++|++++|++.       +....+...     ++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~   69 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHY-------PAIDGLRQA-----GAQCIQADFSTNAGIMAFIDELK   69 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch-------hHHHHHHHc-----CCEEEEcCCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999999761       112222222     36788999999988777664   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----C-CccEEEEeccceeeeccCCCCccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                          .+|++||+||.....     ..+..+..+++|+.++..+.+.+.+.    + ..+++|++||.....+.       
T Consensus        70 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-------  142 (236)
T PRK06483         70 QHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS-------  142 (236)
T ss_pred             hhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-------
Confidence                379999999974321     12334588899999988777666542    1 13589999987543211       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                     +....|+.||...+.+++.++.++  ++++++++||.+..+...   ...   ........ .++
T Consensus       143 ---------------~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~---~~~---~~~~~~~~-~~~  200 (236)
T PRK06483        143 ---------------DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD---DAA---YRQKALAK-SLL  200 (236)
T ss_pred             ---------------CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC---CHH---HHHHHhcc-Ccc
Confidence                           223569999999999999998875  599999999998543211   011   11111111 122


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEec
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSS  260 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~  260 (285)
                      .     .+..++|+++++.+++...-..|. +.+.+
T Consensus       201 ~-----~~~~~~~va~~~~~l~~~~~~~G~~i~vdg  231 (236)
T PRK06483        201 K-----IEPGEEEIIDLVDYLLTSCYVTGRSLPVDG  231 (236)
T ss_pred             c-----cCCCHHHHHHHHHHHhcCCCcCCcEEEeCc
Confidence            2     356799999999999975444454 33443

>PRK07069 short chain dehydrogenase; Validated

Probab=99.88  E-value=3.8e-21  Score=158.18  Aligned_cols=208  Identities=18%  Similarity=0.158  Sum_probs=143.2

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCC--CCCEEEEecCCCChhhHHHHhc--
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGA--SERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +++||||+|+||+++++.|+++|++|++++|+..       +....+. .+...  ...+..+.+|++|.+++.++++  
T Consensus         1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   73 (251)
T PRK07069          1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDA-------AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQA   73 (251)
T ss_pred             CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcc-------hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHH
Confidence            4899999999999999999999999999999731       2222221 11111  1234567899999998877765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHH----HHHHHHHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAIN----GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+|+.....     ..+.....+++|+.    +++.+++++++.+ .++||++||..++...       
T Consensus        74 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~-------  145 (251)
T PRK07069         74 ADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAE-------  145 (251)
T ss_pred             HHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCC-------
Confidence                 469999999976541     11223467888887    7778888888776 7899999998765433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccH-HHHHHHHhcC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSV-RSSLALILGN  221 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~-~~~~~~~~~~  221 (285)
                                     +....|+.+|.+.+.+++.++.+.     +++++.++||.+.+|.......... ........ .
T Consensus       146 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~  209 (251)
T PRK07069        146 ---------------PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLA-R  209 (251)
T ss_pred             ---------------CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHh-c
Confidence                           233569999999999998887663     4899999999999885432111000 00001111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+.     ..+.+++|+++++++++..+
T Consensus       210 ~~~~-----~~~~~~~~va~~~~~l~~~~  233 (251)
T PRK07069        210 GVPL-----GRLGEPDDVAHAVLYLASDE  233 (251)
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHcCcc
Confidence            1111     25678999999999987654

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-20  Score=158.82  Aligned_cols=185  Identities=16%  Similarity=0.055  Sum_probs=126.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+..    ...+....+... ....++.++.+|++|.+++.++++  
T Consensus        15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~----~~~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLD----KGKAAAARITAA-TPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHh-CCCCceEEEECCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999761    000111112211 113468889999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC---CCChHHHHHHHHHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 -----GCTGVLHVATPVDFE---DKEPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                           .+|+|||+||.....   ..+..+..+++|+.+    +..+++.+++.+ .++||++||...+.+..........
T Consensus        90 ~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~  168 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFDDLQW  168 (306)
T ss_pred             HhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCccccCc
Confidence                 479999999975431   122235788999998    556666666655 5799999998754322111111111


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEe--ccCceecCCC
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTL--IPSMVVGPFI  203 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~--Rp~~v~g~~~  203 (285)
                      +.+         .++...|+.||.+.+.+.+.++++.   +++++++  .||.|.++..
T Consensus       169 ~~~---------~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~  218 (306)
T PRK06197        169 ERR---------YNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELA  218 (306)
T ss_pred             ccC---------CCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCccc
Confidence            110         1234679999999999999888764   6666554  7999988753

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.87  E-value=2.2e-20  Score=154.56  Aligned_cols=222  Identities=17%  Similarity=0.109  Sum_probs=152.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|+||||+|+||+.++++|+++|++ |++++|+.        +... ....+...+.++.++.+|+++++++.++++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   76 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNA--------EKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVA   76 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCH--------HHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence            3578999999999999999999999998 99999876        2111 111111223467889999999998887765


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+++.....     ..+..+..+++|+.+..++++++.+.    +..+++|++||..++.+.     
T Consensus        77 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~-----  151 (260)
T PRK06198         77 AADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ-----  151 (260)
T ss_pred             HHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC-----
Confidence                   479999999975431     12223467899999999998887542    213589999998765432     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCC---CCCccHHHHHHHHh
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP---KFAGSVRSSLALIL  219 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~---~~~~~~~~~~~~~~  219 (285)
                                       +....|+.+|...|.+++.++.+.   +++++.++||.++++....   ..............
T Consensus       152 -----------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~  214 (260)
T PRK06198        152 -----------------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAA  214 (260)
T ss_pred             -----------------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHh
Confidence                             223569999999999999887664   6999999999999875321   00011111111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      . ..+     ...+++++|+++++.+++.....  .| .+...++
T Consensus       215 ~-~~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~~~  253 (260)
T PRK06198        215 A-TQP-----FGRLLDPDEVARAVAFLLSDESGLMTGSVIDFDQS  253 (260)
T ss_pred             c-cCC-----ccCCcCHHHHHHHHHHHcChhhCCccCceEeECCc
Confidence            1 111     22578999999999999865432  34 3445443

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.87  E-value=2.9e-20  Score=153.03  Aligned_cols=207  Identities=15%  Similarity=0.120  Sum_probs=146.0

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||+  +.||+.++++|+++|++|++.+|+.        +....+.+..  ..++.++.+|++|+++++++++
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~--------~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~   75 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND--------RMKKSLQKLV--DEEDLLVECDVASDESIERAFA   75 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch--------HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHH
Confidence            45899999999  7999999999999999999998864        2222233321  2367889999999988877764


Q ss_pred             -------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|++||+||....         ...+.++..+++|+.+...+.+++.+. .+-+++|++||.......    
T Consensus        76 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~----  151 (252)
T PRK06079         76 TIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAI----  151 (252)
T ss_pred             HHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccC----
Confidence                   37999999997531         111223577889999998888887653 113689999987643211    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||...+.+.+.++.++   |++++.|.||.|-++.......  .......... 
T Consensus       152 ------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~--~~~~~~~~~~-  210 (252)
T PRK06079        152 ------------------PNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKG--HKDLLKESDS-  210 (252)
T ss_pred             ------------------CcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCC--hHHHHHHHHh-
Confidence                              223569999999999998888763   8999999999998874322111  0111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+..     .+..++|+|+++.+++...
T Consensus       211 ~~p~~-----r~~~pedva~~~~~l~s~~  234 (252)
T PRK06079        211 RTVDG-----VGVTIEEVGNTAAFLLSDL  234 (252)
T ss_pred             cCccc-----CCCCHHHHHHHHHHHhCcc
Confidence            11222     5789999999999999754

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.87  E-value=2.3e-20  Score=154.49  Aligned_cols=216  Identities=15%  Similarity=0.098  Sum_probs=145.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|+.|+++.|+..       +... ...++...+.++.++.+|++|.+++.++++ 
T Consensus         6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~   78 (261)
T PRK08936          6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDE-------EEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQT   78 (261)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Confidence            4689999999999999999999999999998888541       1111 111111123467889999999998887765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+|+.....     ..+..+..+++|+.++..+++    .+++.+..+++|++||.......      
T Consensus        79 ~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~------  152 (261)
T PRK08936         79 AVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPW------  152 (261)
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCC------
Confidence                  379999999975431     112234778999887765544    44554424689999997543221      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.+|.+.+.+.+.++.++   |+++++++||.+.+|..........  ...... ...
T Consensus       153 ----------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~-~~~  213 (261)
T PRK08936        153 ----------------PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPK--QRADVE-SMI  213 (261)
T ss_pred             ----------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHH--HHHHHH-hcC
Confidence                            234579999988888887776554   8999999999998885332211111  111111 111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY  256 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  256 (285)
                      ++     ..+..++|+++.+.+++....  ..|.+
T Consensus       214 ~~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~  243 (261)
T PRK08936        214 PM-----GYIGKPEEIAAVAAWLASSEASYVTGIT  243 (261)
T ss_pred             CC-----CCCcCHHHHHHHHHHHcCcccCCccCcE
Confidence            22     257889999999999987543  34543

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.87  E-value=1.2e-20  Score=156.52  Aligned_cols=206  Identities=17%  Similarity=0.154  Sum_probs=144.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ..+|+++||||+|+||++++++|+++|++|++++|+..        ..        ...++.++.+|++|.+++.++++ 
T Consensus         7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~--------~~--------~~~~~~~~~~D~~~~~~~~~~~~~   70 (266)
T PRK06171          7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG--------DG--------QHENYQFVPTDVSSAEEVNHTVAE   70 (266)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcc--------cc--------ccCceEEEEccCCCHHHHHHHHHH
Confidence            34689999999999999999999999999999998761        11        11267889999999998887765 


Q ss_pred             ------CCCEEEEecccCCCC--------------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeee
Q 023244           82 ------GCTGVLHVATPVDFE--------------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVF  138 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~--------------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~  138 (285)
                            .+|+|||+||.....              ..+..+..+++|+.++..+++++.+.   ....++|++||...+.
T Consensus        71 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  150 (266)
T PRK06171         71 IIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLE  150 (266)
T ss_pred             HHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccC
Confidence                  369999999964320              11223578899999999998887643   1146899999987543


Q ss_pred             ccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCcee-cCCCCCCCCc-----
Q 023244          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVV-GPFICPKFAG-----  209 (285)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~-g~~~~~~~~~-----  209 (285)
                      +.                      +....|+.+|.+.+.+++.++.++   |+++++++||.+. .+........     
T Consensus       151 ~~----------------------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~  208 (266)
T PRK06171        151 GS----------------------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYT  208 (266)
T ss_pred             CC----------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccc
Confidence            32                      223569999999999998888763   8999999999985 3321110000     


Q ss_pred             ---cHHHHHHHHhc-CccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          210 ---SVRSSLALILG-NREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       210 ---~~~~~~~~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                         ........... ...++     ..+..++|+|.++.+++....
T Consensus       209 ~~~~~~~~~~~~~~~~~~p~-----~r~~~~~eva~~~~fl~s~~~  249 (266)
T PRK06171        209 RGITVEQLRAGYTKTSTIPL-----GRSGKLSEVADLVCYLLSDRA  249 (266)
T ss_pred             cCCCHHHHHhhhcccccccC-----CCCCCHHHhhhheeeeecccc
Confidence               00111111111 01122     257889999999999997543

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.5e-20  Score=154.77  Aligned_cols=209  Identities=16%  Similarity=0.147  Sum_probs=144.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +....+. .......++.++.+|++|++.++++++  
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTK--------EKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI   72 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            47899999999999999999999999999999976        2222211 111112478899999999988877664  


Q ss_pred             -----CCCEEEEecccCCC---C--CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||....   .  ..+.++..+++|+.++.++++++.+.    +..+++|++||...+...       
T Consensus        73 ~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------  145 (252)
T PRK07677         73 DEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG-------  145 (252)
T ss_pred             HHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC-------
Confidence                 46999999985332   1  11223578999999999999988432    223689999997543211       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     +....|+.+|.+.+.+.+.++.++    |++++.++||.+.++......... ......... ..
T Consensus       146 ---------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~-~~~~~~~~~-~~  208 (252)
T PRK07677        146 ---------------PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWES-EEAAKRTIQ-SV  208 (252)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCC-HHHHHHHhc-cC
Confidence                           123469999999999998887663    799999999999854321111001 111111111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ++.     .+...+|++.++.+++...
T Consensus       209 ~~~-----~~~~~~~va~~~~~l~~~~  230 (252)
T PRK07677        209 PLG-----RLGTPEEIAGLAYFLLSDE  230 (252)
T ss_pred             CCC-----CCCCHHHHHHHHHHHcCcc
Confidence            222     5789999999999998754

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.87  E-value=1.6e-20  Score=155.68  Aligned_cols=209  Identities=18%  Similarity=0.168  Sum_probs=146.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+...  ...++.++.+|++|.+++.++++  
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   74 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSA--------EKLASLRQR--FGDHVLVVEGDVTSYADNQRAVDQT   74 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCcceEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999976        333222221  12367889999999988877765  


Q ss_pred             -----CCCEEEEecccCCC-------CCCC---hHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCC
Q 023244           82 -----GCTGVLHVATPVDF-------EDKE---PEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-------~~~~---~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                           .+|++||+||....       +.++   .++..+++|+.++..+++++.+.  ...+++|++||...+.+.    
T Consensus        75 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----  150 (263)
T PRK06200         75 VDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPG----  150 (263)
T ss_pred             HHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCC----
Confidence                 47999999997532       1111   12466789999988888877542  113689999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCC-------ccHHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFA-------GSVRSSL  215 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~~  215 (285)
                                        ++...|+.||.+.+.+++.++.++  +++++.+.||.+.++.......       .......
T Consensus       151 ------------------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~  212 (263)
T PRK06200        151 ------------------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLA  212 (263)
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchh
Confidence                              223469999999999999988775  5999999999998774321100       0000011


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ... ....++     ..+..++|+++++.+++...
T Consensus       213 ~~~-~~~~p~-----~r~~~~~eva~~~~fl~s~~  241 (263)
T PRK06200        213 DMI-AAITPL-----QFAPQPEDHTGPYVLLASRR  241 (263)
T ss_pred             HHh-hcCCCC-----CCCCCHHHHhhhhhheeccc
Confidence            111 111122     26889999999999999754

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.87  E-value=4.7e-20  Score=152.96  Aligned_cols=211  Identities=18%  Similarity=0.108  Sum_probs=142.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++..  ...++..+.+|++|.+++.+++
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   78 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDE--------ERLASAEARLREKFPGARLLAARCDVLDEADVAAFA   78 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHH
Confidence            358999999999999999999999999999999986        22211 111111  1236788999999999887766


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.+...+++|+.+...+.+.+    ++.+ .+++|++||.....+.    
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  153 (265)
T PRK07062         79 AAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPE----  153 (265)
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCC----
Confidence            4       369999999975431     11223477888888766665554    4444 5799999998754322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC------ccHHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA------GSVRSSL  215 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~------~~~~~~~  215 (285)
                                        +....|+.+|.+.+.+.+.++.+   .|++++.++||.+.++.......      .......
T Consensus       154 ------------------~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~  215 (265)
T PRK07062        154 ------------------PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWT  215 (265)
T ss_pred             ------------------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHH
Confidence                              22356999999988888877765   48999999999998764211100      0001111


Q ss_pred             HHHh-cCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          216 ALIL-GNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       216 ~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .... ....+.     ..+..++|+|.++.+++...
T Consensus       216 ~~~~~~~~~p~-----~r~~~p~~va~~~~~L~s~~  246 (265)
T PRK07062        216 AALARKKGIPL-----GRLGRPDEAARALFFLASPL  246 (265)
T ss_pred             HHHhhcCCCCc-----CCCCCHHHHHHHHHHHhCch
Confidence            1110 111122     25788999999999998753

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.87  E-value=1.4e-20  Score=153.62  Aligned_cols=205  Identities=20%  Similarity=0.222  Sum_probs=144.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|+|+||||+|+||+++++.|+++|++|++++|+.        +....+ +... ...++.++.+|+++.+++.++
T Consensus         1 ~~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~   71 (238)
T PRK05786          1 MRLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNE--------NKLKRMKKTLS-KYGNIHYVVGDVSSTESARNV   71 (238)
T ss_pred             CCcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHH-hcCCeEEEECCCCCHHHHHHH
Confidence            555678999999999999999999999999999999976        333222 1111 113688899999999988776


Q ss_pred             hcC-------CCEEEEecccCCCC---CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc
Q 023244           80 IAG-------CTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        80 ~~~-------~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                      +++       +|.+||+++.....   ..+..+..++.|+.+...+++.+.+. .+..++|++||.......        
T Consensus        72 ~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~--------  143 (238)
T PRK05786         72 IEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA--------  143 (238)
T ss_pred             HHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC--------
Confidence            653       59999999864321   11222466789999988888777653 113689999987542211        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                   .++...|+.+|.+.+.+++.++.+.   +++++++||++++++.....      . ....   .   
T Consensus       144 -------------~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~------~-~~~~---~---  197 (238)
T PRK05786        144 -------------SPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER------N-WKKL---R---  197 (238)
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh------h-hhhh---c---
Confidence                         1223569999999998888877654   89999999999998742110      0 0000   0   


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                        .....++..+|+++.+.+++..+
T Consensus       198 --~~~~~~~~~~~va~~~~~~~~~~  220 (238)
T PRK05786        198 --KLGDDMAPPEDFAKVIIWLLTDE  220 (238)
T ss_pred             --cccCCCCCHHHHHHHHHHHhccc
Confidence              00114688899999999999754

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.87  E-value=1.8e-20  Score=154.28  Aligned_cols=214  Identities=19%  Similarity=0.127  Sum_probs=141.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC-   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   83 (285)
                      ||+++||||+|+||+.++++|+++|++|++++|+..       +....+..  ....+++++.+|++|.++++.+++.+ 
T Consensus         1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~-------~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~   71 (251)
T PRK06924          1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTEN-------KELTKLAE--QYNSNLTFHSLDLQDVHELETNFNEIL   71 (251)
T ss_pred             CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCch-------HHHHHHHh--ccCCceEEEEecCCCHHHHHHHHHHHH
Confidence            368999999999999999999999999999998751       11111111  11347889999999999888877532 


Q ss_pred             ----------CEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 023244           84 ----------TGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        84 ----------d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                                .++||+||....      ...+.....+++|+.+...+++.+    ++.+..++||++||..+....   
T Consensus        72 ~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---  148 (251)
T PRK06924         72 SSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPY---  148 (251)
T ss_pred             HhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCC---
Confidence                      278999987532      111223466778888866555544    333324689999997643221   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCC---CCccHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPK---FAGSVRSSL  215 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~---~~~~~~~~~  215 (285)
                                         ++...|+.+|.+.+.+++.++.+     .+++++.++||.+-++.....   .........
T Consensus       149 -------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~  209 (251)
T PRK06924        149 -------------------FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLD  209 (251)
T ss_pred             -------------------CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHH
Confidence                               23467999999999999888765     369999999999877642110   000000000


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcC-CCCCceE
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY-PDAKGRY  256 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~-~~~~~~~  256 (285)
                      .....  ..     ...+..++|+|+.+++++.. ....|.+
T Consensus       210 ~~~~~--~~-----~~~~~~~~dva~~~~~l~~~~~~~~G~~  244 (251)
T PRK06924        210 RFITL--KE-----EGKLLSPEYVAKALRNLLETEDFPNGEV  244 (251)
T ss_pred             HHHHH--hh-----cCCcCCHHHHHHHHHHHHhcccCCCCCE
Confidence            00000  00     11478999999999999986 3334543

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.87  E-value=2.9e-20  Score=152.09  Aligned_cols=205  Identities=19%  Similarity=0.213  Sum_probs=140.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |++|||||+|+||++++++|+++|++|+++.|..+       +... ...+......++.++.+|++|++++.++++   
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   73 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE-------ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVE   73 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999988320       1111 111111123478899999999988777664   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+||.....     ..+.....++.|+.++..+++.    +++.+ .+++|++||.....+.        
T Consensus        74 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~--------  144 (242)
T TIGR01829        74 AELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQ--------  144 (242)
T ss_pred             HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC--------
Confidence                379999999875431     1122347788999987775555    44455 6799999997543222        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    .....|+.+|.+.+.+++.++++   .+++++.++||.+.+|..........    ..... ..++
T Consensus       145 --------------~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~----~~~~~-~~~~  205 (242)
T TIGR01829       145 --------------FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVL----NSIVA-QIPV  205 (242)
T ss_pred             --------------CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHH----HHHHh-cCCC
Confidence                          12356999999888888877655   38999999999999875322111111    11111 1112


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .     .+...+|++.++.+++.++
T Consensus       206 ~-----~~~~~~~~a~~~~~l~~~~  225 (242)
T TIGR01829       206 G-----RLGRPEEIAAAVAFLASEE  225 (242)
T ss_pred             C-----CCcCHHHHHHHHHHHcCch
Confidence            1     4677899999998888654

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.86  E-value=1.7e-20  Score=153.67  Aligned_cols=205  Identities=21%  Similarity=0.141  Sum_probs=138.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      ||+++||||||+||+.++++|+++|++|++++|+..        ... ..   ..+.++.++.+|++|.++++++++   
T Consensus         1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~--------~~~-~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   68 (243)
T PRK07023          1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRH--------PSL-AA---AAGERLAEVELDLSDAAAAAAWLAGDL   68 (243)
T ss_pred             CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcc--------hhh-hh---ccCCeEEEEEeccCCHHHHHHHHHHHH
Confidence            358999999999999999999999999999999761        110 11   113468889999999988877442   


Q ss_pred             --------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCC
Q 023244           82 --------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 --------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                              .+|++||+|+.....      ..+..+..+++|+.+...+.+.+.+    .+ .+++|++||..++.+.   
T Consensus        69 ~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~---  144 (243)
T PRK07023         69 LAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAY---  144 (243)
T ss_pred             HHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCC---
Confidence                    368999999975431      1122357788999997766665543    33 5799999998754322   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH--cCCcEEEeccCceecCCCCCC---CCccHHHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK---FAGSVRSSLALI  218 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~i~~~i~Rp~~v~g~~~~~~---~~~~~~~~~~~~  218 (285)
                                         ++...|+.+|.+.|.+++.++.+  .++++++++||.+-++.....   .......... .
T Consensus       145 -------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~-~  204 (243)
T PRK07023        145 -------------------AGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRER-F  204 (243)
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHH-H
Confidence                               23467999999999999988865  489999999999876531100   0000000000 0


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ...      .....++..+|+|..++..+..+.
T Consensus       205 ~~~------~~~~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        205 REL------KASGALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHh------hhcCCCCCHHHHHHHHHHHHhccc
Confidence            000      001246889999997766665543

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=3.3e-20  Score=154.18  Aligned_cols=220  Identities=15%  Similarity=0.081  Sum_probs=147.0

Q ss_pred             CCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||++  .||+.++++|+++|++|++.+|+.     ...+....+.+.  .+ ....+.+|++|.++++++++
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~-----~~~~~~~~~~~~--~g-~~~~~~~Dv~d~~~v~~~~~   77 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGE-----ALGKRVKPLAES--LG-SDFVLPCDVEDIASVDAVFE   77 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCch-----HHHHHHHHHHHh--cC-CceEEeCCCCCHHHHHHHHH
Confidence            458899999997  999999999999999999988864     111112222111  11 23468899999998887765


Q ss_pred             -------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|++||+||....         ...+.++..+++|+.++.++++++... ..-+++|++||.......    
T Consensus        78 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~----  153 (271)
T PRK06505         78 ALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVM----  153 (271)
T ss_pred             HHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccC----
Confidence                   37999999997531         112223577889999998888776542 112689999997653221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||++.+.+.+.++.++   |++++.|.||.+.++.... .... ........ .
T Consensus       154 ------------------~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~-~~~~-~~~~~~~~-~  212 (271)
T PRK06505        154 ------------------PNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAG-IGDA-RAIFSYQQ-R  212 (271)
T ss_pred             ------------------CccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCcccccccc-Ccch-HHHHHHHh-h
Confidence                              233569999999999998888774   7999999999998864221 1110 00111111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--CceE-EEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRY-ICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~~  261 (285)
                      ..++.     .+..++|+|+++++++.....  .|.. .+.++
T Consensus       213 ~~p~~-----r~~~peeva~~~~fL~s~~~~~itG~~i~vdgG  250 (271)
T PRK06505        213 NSPLR-----RTVTIDEVGGSALYLLSDLSSGVTGEIHFVDSG  250 (271)
T ss_pred             cCCcc-----ccCCHHHHHHHHHHHhCccccccCceEEeecCC
Confidence            11222     467899999999999975432  3543 44443

>TIGR02415 23BDH acetoin reductases

Probab=99.86  E-value=2.2e-20  Score=153.98  Aligned_cols=219  Identities=19%  Similarity=0.182  Sum_probs=148.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+++||||+|+||.+++++|+++|++|+++.|+.        +.. .....+...+.++.++.+|++|++++.++++   
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   72 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNE--------ETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAA   72 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999999875        222 1112221223468889999999998877764   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+|+.....     .....+..+++|+.++..+++++.+    .+..+++|++||.....+.        
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------  144 (254)
T TIGR02415        73 EKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN--------  144 (254)
T ss_pred             HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC--------
Confidence                369999999875431     1122347899999998877666543    3323689999997654332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc-------cHHHHHHHH
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG-------SVRSSLALI  218 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~-------~~~~~~~~~  218 (285)
                                    +....|+.+|.+.+.+++.++.++   ++++++++||.+.++........       .........
T Consensus       145 --------------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~  210 (254)
T TIGR02415       145 --------------PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEF  210 (254)
T ss_pred             --------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHH
Confidence                          223569999999999998887664   79999999999977642110000       000000000


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCCC--CceEE-Eec
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRYI-CSS  260 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~-~~~  260 (285)
                      . ...+     ...+.+++|+++++.+++.....  .|.++ +.+
T Consensus       211 ~-~~~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~  249 (254)
T TIGR02415       211 S-SEIA-----LGRPSEPEDVAGLVSFLASEDSDYITGQSILVDG  249 (254)
T ss_pred             H-hhCC-----CCCCCCHHHHHHHHHhhcccccCCccCcEEEecC
Confidence            0 0011     12578999999999999987543  35544 443

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.86  E-value=1.9e-21  Score=158.21  Aligned_cols=219  Identities=24%  Similarity=0.284  Sum_probs=150.5

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCEEE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVL   87 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi   87 (285)
                      |+|+||||.+|+.+++.|++.+++|.++.|+.      +.+....+...     +++++.+|+.|.+.+.++++++|+||
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~------~~~~~~~l~~~-----g~~vv~~d~~~~~~l~~al~g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDP------SSDRAQQLQAL-----GAEVVEADYDDPESLVAALKGVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSS------HHHHHHHHHHT-----TTEEEES-TT-HHHHHHHHTTCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEecc------chhhhhhhhcc-----cceEeecccCCHHHHHHHHcCCceEE
Confidence            79999999999999999999999999999987      11233344444     66888999999999999999999999


Q ss_pred             EecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCch
Q 023244           88 HVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS  167 (285)
Q Consensus        88 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~  167 (285)
                      .+.+....   ..        .....+++++|++.| +++||+.|....+  .        +...         ..|..+
T Consensus        70 ~~~~~~~~---~~--------~~~~~~li~Aa~~ag-Vk~~v~ss~~~~~--~--------~~~~---------~~p~~~  118 (233)
T PF05368_consen   70 SVTPPSHP---SE--------LEQQKNLIDAAKAAG-VKHFVPSSFGADY--D--------ESSG---------SEPEIP  118 (233)
T ss_dssp             EESSCSCC---CH--------HHHHHHHHHHHHHHT--SEEEESEESSGT--T--------TTTT---------STTHHH
T ss_pred             eecCcchh---hh--------hhhhhhHHHhhhccc-cceEEEEEecccc--c--------cccc---------ccccch
Confidence            88775441   11        334568999999999 9999975543321  0        0000         012234


Q ss_pred             hHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc--ccccc--ccCccee-eHHHHHHH
Q 023244          168 YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR--EEYGF--LLNTSMV-HVDDVARA  242 (285)
Q Consensus       168 Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~i-~~~D~a~~  242 (285)
                      +-..|...|..+++    .+++++++|||.++.......    ..  ........  ..+..  +....++ +.+|++++
T Consensus       119 ~~~~k~~ie~~l~~----~~i~~t~i~~g~f~e~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~  188 (233)
T PF05368_consen  119 HFDQKAEIEEYLRE----SGIPYTIIRPGFFMENLLPPF----AP--VVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRA  188 (233)
T ss_dssp             HHHHHHHHHHHHHH----CTSEBEEEEE-EEHHHHHTTT----HH--TTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHH
T ss_pred             hhhhhhhhhhhhhh----ccccceeccccchhhhhhhhh----cc--cccccccceEEEEccCCCccccccccHHHHHHH
Confidence            55678888887754    489999999999875421110    00  00011111  12222  3334564 99999999


Q ss_pred             HHHhhcCCCCC--ce-EEEeccccCHHHHHHHHHhhCCC
Q 023244          243 HIFLLEYPDAK--GR-YICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       243 ~~~~~~~~~~~--~~-~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +..++.++...  +. +.++++.+|..|+++.+++.+|+
T Consensus       189 va~il~~p~~~~~~~~~~~~~~~~t~~eia~~~s~~~G~  227 (233)
T PF05368_consen  189 VAAILLDPEKHNNGKTIFLAGETLTYNEIAAILSKVLGK  227 (233)
T ss_dssp             HHHHHHSGGGTTEEEEEEEGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHcChHHhcCCEEEEeCCCCCCHHHHHHHHHHHHCC
Confidence            99999987654  44 45777899999999999999986

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=99.86  E-value=7.6e-21  Score=146.69  Aligned_cols=250  Identities=16%  Similarity=0.127  Sum_probs=182.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCe-EEEEec-CCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYS-VTTTVR-SELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~-V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ...+|||||+-|.+|..++..|..+ |.+ |++-+- +++          .   ..   -..-.++..|+.|...+++++
T Consensus        43 ~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp----------~---~V---~~~GPyIy~DILD~K~L~eIV  106 (366)
T KOG2774|consen   43 KAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPP----------A---NV---TDVGPYIYLDILDQKSLEEIV  106 (366)
T ss_pred             CCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCc----------h---hh---cccCCchhhhhhccccHHHhh
Confidence            3468999999999999999999765 654 444332 221          0   00   112346779999999999998


Q ss_pred             c--CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           81 A--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        81 ~--~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                      -  .+|++||+.+..+.-.+.......++|+.|..|+++.++++. . ++..-||+++++...+. .+...         
T Consensus       107 Vn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~k-L-~iFVPSTIGAFGPtSPR-NPTPd---------  174 (366)
T KOG2774|consen  107 VNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHK-L-KVFVPSTIGAFGPTSPR-NPTPD---------  174 (366)
T ss_pred             cccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcC-e-eEeecccccccCCCCCC-CCCCC---------
Confidence            4  489999999887653333334788999999999999999987 4 66778888877655321 11111         


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHHHhcCc--cccccccCccee
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNR--EEYGFLLNTSMV  234 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~i  234 (285)
                      -.++.|++.||.||..+|.+-..+..++|+.+-++|++.+......+.  ..-....+..++..+.  ..++++....++
T Consensus       175 ltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmm  254 (366)
T KOG2774|consen  175 LTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMM  254 (366)
T ss_pred             eeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCcee
Confidence            123467899999999999999888888999999999888776433322  2223444444443333  456678899999


Q ss_pred             eHHHHHHHHHHhhcCCCC---CceEEEeccccCHHHHHHHHHhhCCCCCC
Q 023244          235 HVDDVARAHIFLLEYPDA---KGRYICSSHTLTIQEMAEFLSAKYPEYPI  281 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~---~~~~~~~~~~~s~~e~~~~i~~~~~~~~~  281 (285)
                      |.+|+.++++.++..+..   ..+||+++-++|-.|++..+.+..+-+.+
T Consensus       255 y~~dc~~~~~~~~~a~~~~lkrr~ynvt~~sftpee~~~~~~~~~p~~~i  304 (366)
T KOG2774|consen  255 YDTDCMASVIQLLAADSQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEI  304 (366)
T ss_pred             ehHHHHHHHHHHHhCCHHHhhhheeeeceeccCHHHHHHHHHhhCCCcee
Confidence            999999999999986643   24699999999999999999998876443

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.86  E-value=3.5e-20  Score=153.25  Aligned_cols=208  Identities=18%  Similarity=0.099  Sum_probs=139.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+++||||+|.||+.++++|+++|++|++++|+.        +.... ..++.. ..++.++.+|++|.++++++++   
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~-~~~~~~~~~Dv~d~~~~~~~~~~~~   71 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNE--------ENLEKALKELKE-YGEVYAVKADLSDKDDLKNLVKEAW   71 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHh-cCCceEEEcCCCCHHHHHHHHHHHH
Confidence            4799999999999999999999999999999976        22221 122211 1267889999999998887774   


Q ss_pred             ----CCCEEEEecccCCC-----CCC--ChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ----GCTGVLHVATPVDF-----EDK--EPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~--~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                          .+|+|||+||....     .+.  +.....+.+|+.+...+..    .+.+....++||++||..+....      
T Consensus        72 ~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~------  145 (259)
T PRK08340         72 ELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPM------  145 (259)
T ss_pred             HhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCC------
Confidence                47999999997431     111  1123456677776554443    33322225799999998754221      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc-------cHHH-HH
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG-------SVRS-SL  215 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~-------~~~~-~~  215 (285)
                                      ++...|+.+|...+.+.+.++.++   |++++.+.||.+-+|........       .... ..
T Consensus       146 ----------------~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~  209 (259)
T PRK08340        146 ----------------PPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWE  209 (259)
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHH
Confidence                            234579999999999999998775   79999999999987743211000       0000 00


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..... ..+.     ..+..++|+|+++.+++...
T Consensus       210 ~~~~~-~~p~-----~r~~~p~dva~~~~fL~s~~  238 (259)
T PRK08340        210 REVLE-RTPL-----KRTGRWEELGSLIAFLLSEN  238 (259)
T ss_pred             HHHhc-cCCc-----cCCCCHHHHHHHHHHHcCcc
Confidence            11111 1112     25788999999999999754

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.86  E-value=3.7e-20  Score=154.01  Aligned_cols=211  Identities=15%  Similarity=0.143  Sum_probs=144.7

Q ss_pred             CCCCCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHH
Q 023244            1 MEEGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         1 M~~~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |...+|+++||||+  +.||+.+++.|+++|++|++.+|+.     ...+....+ .+.   +.. ..+.+|++|.++++
T Consensus         1 ~~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~-----~~~~~~~~~~~~~---~~~-~~~~~Dv~d~~~v~   71 (274)
T PRK08415          1 MIMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNE-----ALKKRVEPIAQEL---GSD-YVYELDVSKPEHFK   71 (274)
T ss_pred             CccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCH-----HHHHHHHHHHHhc---CCc-eEEEecCCCHHHHH
Confidence            66668999999997  7999999999999999999998874     111122222 122   123 57889999999888


Q ss_pred             HHhc-------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeecc
Q 023244           78 AAIA-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~  140 (285)
                      ++++       .+|++||+||....         ...+.++..+++|+.+...+.+++.+. ..-+++|++||.....+.
T Consensus        72 ~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~  151 (274)
T PRK08415         72 SLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYV  151 (274)
T ss_pred             HHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCC
Confidence            7765       36999999997431         111223578999999998888876643 113689999997543211


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            +....|+.||++.+.+.+.++.+   .|++++.+.||.+.++.... .... ..... 
T Consensus       152 ----------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~-~~~~~-  206 (274)
T PRK08415        152 ----------------------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASG-IGDF-RMILK-  206 (274)
T ss_pred             ----------------------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhc-cchh-hHHhh-
Confidence                                  22356999999999999888876   47999999999998763211 1100 00000 


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ......+.     ..+..++|+|.++++++...
T Consensus       207 ~~~~~~pl-----~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        207 WNEINAPL-----KKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             hhhhhCch-----hccCCHHHHHHHHHHHhhhh
Confidence            00011122     25788999999999999753

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.86  E-value=5e-20  Score=152.39  Aligned_cols=209  Identities=14%  Similarity=0.110  Sum_probs=141.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+++||++++++|+++|++|+++.|+..       +.... ..++. ..+.++.++.+|++|+++++++++
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   79 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNV-------EEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFK   79 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence            4689999999999999999999999999988876431       12111 11111 113478899999999988887765


Q ss_pred             -------CCCEEEEecccCCC---------C--CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeec
Q 023244           82 -------GCTGVLHVATPVDF---------E--DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFY  139 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~--~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~  139 (285)
                             .+|++||+|+....         .  ..+.....+++|+.+...+.+.+    ++.+ .++||++||.....+
T Consensus        80 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~  158 (260)
T PRK08416         80 KIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVY  158 (260)
T ss_pred             HHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccC
Confidence                   37999999986421         0  11223467778887766655544    3333 469999999764322


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~  216 (285)
                      .                      +....|+.||++.+.+++.++.++   |++++++.||.+.++.... ..... ....
T Consensus       159 ~----------------------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~-~~~~~-~~~~  214 (260)
T PRK08416        159 I----------------------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKA-FTNYE-EVKA  214 (260)
T ss_pred             C----------------------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhh-ccCCH-HHHH
Confidence            2                      223469999999999999998875   8999999999997764221 11111 1111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..... .+.     ..+..++|+|.++++++...
T Consensus       215 ~~~~~-~~~-----~r~~~p~~va~~~~~l~~~~  242 (260)
T PRK08416        215 KTEEL-SPL-----NRMGQPEDLAGACLFLCSEK  242 (260)
T ss_pred             HHHhc-CCC-----CCCCCHHHHHHHHHHHcChh
Confidence            11111 112     25789999999999998654

>PRK06484 short chain dehydrogenase; Validated

Probab=99.86  E-value=5e-20  Score=167.02  Aligned_cols=219  Identities=17%  Similarity=0.169  Sum_probs=153.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||.+++++|+++|++|++++|+.        +....+.+.  ...++..+.+|++|.+++.++++  
T Consensus       268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~  337 (520)
T PRK06484        268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDA--------EGAKKLAEA--LGDEHLSVQADITDEAAVESAFAQI  337 (520)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCceeEEEccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999976        333322221  12356778999999998887775  


Q ss_pred             -----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                           .+|++||+||....      ...+.++..+++|+.++.++.+++... ...++||++||.....+.         
T Consensus       338 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  408 (520)
T PRK06484        338 QARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL---------  408 (520)
T ss_pred             HHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC---------
Confidence                 37999999997532      111223578999999999998887654 224699999998765332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   ++...|+.+|+..+.+++.++.+.   |+++++++||.+.++............. ..... ..+..
T Consensus       409 -------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~-~~~~~-~~~~~  473 (520)
T PRK06484        409 -------------PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADF-DSIRR-RIPLG  473 (520)
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHH-HHHHh-cCCCC
Confidence                         234579999999999999888764   7999999999998875322110000001 11111 11121


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                           .+..++|+|+++++++....  ..|. +.+.++
T Consensus       474 -----~~~~~~dia~~~~~l~s~~~~~~~G~~i~vdgg  506 (520)
T PRK06484        474 -----RLGDPEEVAEAIAFLASPAASYVNGATLTVDGG  506 (520)
T ss_pred             -----CCcCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence                 46889999999999997543  2344 445544

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.86  E-value=9.3e-20  Score=168.52  Aligned_cols=222  Identities=19%  Similarity=0.173  Sum_probs=149.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCC--CCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP--GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +..... ..+.  ....++..+.+|++|.+++.+++
T Consensus       413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~--------~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~  484 (676)
T TIGR02632       413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNL--------EAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAF  484 (676)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHH
Confidence            358999999999999999999999999999999976        222211 1111  11235778899999999888887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       ++|+|||+||.....     ..+.....+++|+.+...+.+.+    ++.+..+++|++||..++.+.    
T Consensus       485 ~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~----  560 (676)
T TIGR02632       485 ADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG----  560 (676)
T ss_pred             HHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC----
Confidence            6       479999999975431     11223477888988877665444    333323589999997755333    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCcee-cCCCCCCCCc--c-------H
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVV-GPFICPKFAG--S-------V  211 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~-g~~~~~~~~~--~-------~  211 (285)
                                        +....|+.||.+.+.+++.++.+.   |++++.++|+.|+ |.+.......  .       .
T Consensus       561 ------------------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~  622 (676)
T TIGR02632       561 ------------------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPA  622 (676)
T ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCCh
Confidence                              234579999999999999988763   7999999999997 3332211000  0       0


Q ss_pred             HHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          212 RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..... ......+     ...+++++|+|+++.+++....  ..| +++++++
T Consensus       623 ~~~~~-~~~~r~~-----l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG  669 (676)
T TIGR02632       623 DELEE-HYAKRTL-----LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGG  669 (676)
T ss_pred             HHHHH-HHHhcCC-----cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence            00000 0111112     2367999999999999986432  234 4556554

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.1e-19  Score=150.56  Aligned_cols=207  Identities=21%  Similarity=0.179  Sum_probs=145.4

Q ss_pred             CCeEEEecCCc-hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            5 KGRVCVTGGTG-FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +|+++||||+| .||+.+++.|+++|++|++++|+.        +.... ...+..  ...++.++.+|+++.+++.+++
T Consensus        17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   88 (262)
T PRK07831         17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHE--------RRLGETADELAAELGLGRVEAVVCDVTSEAQVDALI   88 (262)
T ss_pred             CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHH
Confidence            58999999997 799999999999999999998876        22211 111111  1236888999999998888776


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.....+++|+.+...+++++.+.    +...++|++||.......    
T Consensus        89 ~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~----  164 (262)
T PRK07831         89 DAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQ----  164 (262)
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC----
Confidence            5       479999999974321     11223477889999998888876542    113689999887543221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.+|.+.+.+++.++.+   +|+++++++||.+.+|.......   ......... 
T Consensus       165 ------------------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~---~~~~~~~~~-  222 (262)
T PRK07831        165 ------------------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTS---AELLDELAA-  222 (262)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccC---HHHHHHHHh-
Confidence                              23356999999999999999876   48999999999999885322111   111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..++.     .+..++|+|+++++++...
T Consensus       223 ~~~~~-----r~~~p~~va~~~~~l~s~~  246 (262)
T PRK07831        223 REAFG-----RAAEPWEVANVIAFLASDY  246 (262)
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHcCch
Confidence            11222     5788999999999999764

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=1e-19  Score=150.52  Aligned_cols=208  Identities=16%  Similarity=0.119  Sum_probs=140.9

Q ss_pred             CCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||  ++.||+++++.|+++|++|++..|..     ...+....+..   .......+.+|++|.++++++++ 
T Consensus         6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~   77 (261)
T PRK08690          6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-----KLEERVRKMAA---ELDSELVFRCDVASDDEINQVFAD   77 (261)
T ss_pred             CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-----HHHHHHHHHHh---ccCCceEEECCCCCHHHHHHHHHH
Confidence            579999997  67999999999999999999887754     11122222221   11234578999999998888764 


Q ss_pred             ------CCCEEEEecccCCCC-------C---CChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCC
Q 023244           82 ------GCTGVLHVATPVDFE-------D---KEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-------~---~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~  143 (285)
                            .+|++||+||.....       .   .+.++..+++|+.+...+.+++...  ..-+++|++||.......   
T Consensus        78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~---  154 (261)
T PRK08690         78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAI---  154 (261)
T ss_pred             HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCC---
Confidence                  379999999985421       1   1123466788998887777765432  113689999987654222   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         +....|+.+|.+.+.+.+.++.+   .|++++.+.||.+.++.... .... .........
T Consensus       155 -------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~-~~~~-~~~~~~~~~  213 (261)
T PRK08690        155 -------------------PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASG-IADF-GKLLGHVAA  213 (261)
T ss_pred             -------------------CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhc-CCch-HHHHHHHhh
Confidence                               23456999999999988887755   48999999999998764221 1110 111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                       ..++.     .+..++|+|+++.+++...
T Consensus       214 -~~p~~-----r~~~peevA~~v~~l~s~~  237 (261)
T PRK08690        214 -HNPLR-----RNVTIEEVGNTAAFLLSDL  237 (261)
T ss_pred             -cCCCC-----CCCCHHHHHHHHHHHhCcc
Confidence             12222     5789999999999999854

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1.2e-19  Score=148.28  Aligned_cols=196  Identities=15%  Similarity=0.144  Sum_probs=137.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCC-CCCCCEEEEecCCCCh--hhHHHHh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHP--DGFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~--~~~~~~~   80 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++. .....+.++.+|+++.  +++.+++
T Consensus         6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (239)
T PRK08703          6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQ--------KKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFA   77 (239)
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCh--------HHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHH
Confidence            58999999999999999999999999999999987        222211 1111 1123466788998753  3444433


Q ss_pred             --------cCCCEEEEecccCCC----CC--CChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCC
Q 023244           81 --------AGCTGVLHVATPVDF----ED--KEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        81 --------~~~d~vih~a~~~~~----~~--~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (285)
                              ..+|+|||+||....    ..  .+.....+++|+.++.++++++.+    .+ ..++|++||.....+.  
T Consensus        78 ~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~--  154 (239)
T PRK08703         78 ATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPK--  154 (239)
T ss_pred             HHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCC--
Confidence                    347999999996432    11  112246789999998888887754    23 5799999986543211  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc----CCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                          +....|+.||++.+.+++.++.++    ++++++++||.|++|......+          
T Consensus       155 --------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~----------  204 (239)
T PRK08703        155 --------------------AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHP----------  204 (239)
T ss_pred             --------------------CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCC----------
Confidence                                223469999999999999988775    5999999999999985322111          


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                       +.  .     ...+...+|++..+.+++..
T Consensus       205 -~~--~-----~~~~~~~~~~~~~~~~~~~~  227 (239)
T PRK08703        205 -GE--A-----KSERKSYGDVLPAFVWWASA  227 (239)
T ss_pred             -CC--C-----ccccCCHHHHHHHHHHHhCc
Confidence             00  0     11457899999999999974

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.85  E-value=8.4e-20  Score=152.04  Aligned_cols=207  Identities=18%  Similarity=0.192  Sum_probs=140.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCC-CCCCEEEEecCCCChhhHHHHhc--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPG-ASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      |+++||||||+||.+++++|+++|++|++++|+.        +... ...++.. ....+.++.+|++|.+++.++++  
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   72 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDA--------DGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADI   72 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHH
Confidence            4799999999999999999999999999999876        2211 1112111 12235567899999988777664  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||++|.....     ..+..+..+++|+.++.++++++..    .+..+++|++||.....+.       
T Consensus        73 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~-------  145 (272)
T PRK07832         73 HAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVAL-------  145 (272)
T ss_pred             HHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCC-------
Confidence                 379999999975431     1122357899999999999998643    2224699999997643222       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC----ccHHHHHHHHhc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA----GSVRSSLALILG  220 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~----~~~~~~~~~~~~  220 (285)
                                     +....|+.+|.+.+.+.+.++.+   .++++++++||.+.++.......    ......... ..
T Consensus       146 ---------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~  209 (272)
T PRK07832        146 ---------------PWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKW-VD  209 (272)
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHH-HH
Confidence                           23356999999888777666644   58999999999999875322100    000000000 00


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .       .....+.++|+|..+++++.++
T Consensus       210 ~-------~~~~~~~~~~vA~~~~~~~~~~  232 (272)
T PRK07832        210 R-------FRGHAVTPEKAAEKILAGVEKN  232 (272)
T ss_pred             h-------cccCCCCHHHHHHHHHHHHhcC
Confidence            0       0114689999999999999643

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.85  E-value=1.2e-19  Score=149.85  Aligned_cols=212  Identities=12%  Similarity=0.038  Sum_probs=144.2

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+  +.||++++++|+++|++|++..|+..     .......+.++......+.++.+|++|.+++.++++
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   79 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDE-----KGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFE   79 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcc-----cchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHH
Confidence            56899999986  79999999999999999988877541     111111222221112246688999999998887765


Q ss_pred             -------CCCEEEEecccCCC-------C--CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF-------E--DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-------~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|++||+||....       .  ..+.++..+++|+.++..+.+++.+. ..-+++|++||.......    
T Consensus        80 ~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----  155 (258)
T PRK07370         80 TIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAI----  155 (258)
T ss_pred             HHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCC----
Confidence                   37999999997531       1  12233578899999988888876542 113689999997643211    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.++   |++++++.||.+.++.... ...... ....... 
T Consensus       156 ------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~-~~~~~~-~~~~~~~-  214 (258)
T PRK07370        156 ------------------PNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSA-VGGILD-MIHHVEE-  214 (258)
T ss_pred             ------------------cccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhc-cccchh-hhhhhhh-
Confidence                              223569999999999999998774   7999999999998764211 111001 1111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..++     ..+...+|++.++.+++...
T Consensus       215 ~~p~-----~r~~~~~dva~~~~fl~s~~  238 (258)
T PRK07370        215 KAPL-----RRTVTQTEVGNTAAFLLSDL  238 (258)
T ss_pred             cCCc-----CcCCCHHHHHHHHHHHhChh
Confidence            1122     25788999999999999754

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=2.1e-19  Score=148.45  Aligned_cols=210  Identities=15%  Similarity=0.042  Sum_probs=143.3

Q ss_pred             CCCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..+|+++||||+  +.||.+++++|+++|++|++++|+.     ...+....+.+.   ...+.++.+|++|.+++++++
T Consensus         8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~-----~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~   79 (258)
T PRK07533          8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLND-----KARPYVEPLAEE---LDAPIFLPLDVREPGQLEAVF   79 (258)
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCh-----hhHHHHHHHHHh---hccceEEecCcCCHHHHHHHH
Confidence            346899999998  5999999999999999999999875     111111222111   123457889999999888776


Q ss_pred             c-------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|++||+||....         ...+.++..+++|+.+...+.+++... ..-.++|++||.......   
T Consensus        80 ~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~---  156 (258)
T PRK07533         80 ARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVV---  156 (258)
T ss_pred             HHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCC---
Confidence            4       36999999997431         111223588999999999988876543 112589999986542111   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         +....|+.||++.+.+.+.++.+.   |++++.+.||.+.++.... ...... .......
T Consensus       157 -------------------~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~-~~~~~~-~~~~~~~  215 (258)
T PRK07533        157 -------------------ENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASG-IDDFDA-LLEDAAE  215 (258)
T ss_pred             -------------------ccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhc-cCCcHH-HHHHHHh
Confidence                               223569999999999998887763   7999999999998764221 111111 1111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                       ..+.     ..+..++|+|.++++++...
T Consensus       216 -~~p~-----~r~~~p~dva~~~~~L~s~~  239 (258)
T PRK07533        216 -RAPL-----RRLVDIDDVGAVAAFLASDA  239 (258)
T ss_pred             -cCCc-----CCCCCHHHHHHHHHHHhChh
Confidence             1122     25789999999999999753

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.85  E-value=8.8e-20  Score=149.02  Aligned_cols=203  Identities=17%  Similarity=0.198  Sum_probs=142.7

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc------
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA------   81 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   81 (285)
                      |+||||+|+||.+++++|+++|++|++++|+..      ........++.....++.++.+|++|.+++.++++      
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   74 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGR------SDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEH   74 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCH------HHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            689999999999999999999999999887641      01111122222223478899999999998877765      


Q ss_pred             -CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH-----hcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 -GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL-----KSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 -~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                       ..|.+||++|.....     ..+....++++|+.++.++++++.     +.+ .+++|++||.....+.          
T Consensus        75 ~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~----------  143 (239)
T TIGR01831        75 GAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGN----------  143 (239)
T ss_pred             CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCC----------
Confidence             369999999975431     122235789999999999988752     233 5789999998765443          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  +....|+.+|.+.+.+.+.++.+   .|++++.++||.+.++..... .   ........  ..++  
T Consensus       144 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~--~~~~--  203 (239)
T TIGR01831       144 ------------RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEV-E---HDLDEALK--TVPM--  203 (239)
T ss_pred             ------------CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhh-h---HHHHHHHh--cCCC--
Confidence                        22346999999998888887765   389999999999988753221 1   11111111  1122  


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                         ..+...+|+++.+.+++...
T Consensus       204 ---~~~~~~~~va~~~~~l~~~~  223 (239)
T TIGR01831       204 ---NRMGQPAEVASLAGFLMSDG  223 (239)
T ss_pred             ---CCCCCHHHHHHHHHHHcCch
Confidence               25778999999999999754

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.85  E-value=1e-19  Score=151.69  Aligned_cols=229  Identities=19%  Similarity=0.185  Sum_probs=145.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      |+|+++|||| |+||++++++|. +|++|++++|+.        +... ...++...+.++.++.+|++|.+++.++++ 
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~   70 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNE--------ENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAAT   70 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHH
Confidence            3578999998 699999999996 799999999976        2221 112222123468889999999998887775 


Q ss_pred             -----CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccC-C--CCcc---ccc
Q 023244           82 -----GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYND-K--DVDM---MDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~-~--~~~~---~~e  149 (285)
                           .+|+|||+||.... ..++ +.++++|+.++.++++++.+. ..-+++|++||........ .  ....   ++.
T Consensus        71 ~~~~g~id~li~nAG~~~~-~~~~-~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  148 (275)
T PRK06940         71 AQTLGPVTGLVHTAGVSPS-QASP-EAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPT  148 (275)
T ss_pred             HHhcCCCCEEEECCCcCCc-hhhH-HHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccc
Confidence                 37999999997543 2334 589999999999999988654 1124678888876543210 0  0000   000


Q ss_pred             CCCCchhhhhh--cCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          150 TFWSDVDYIRK--LDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       150 ~~~~~~~~~~~--~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                      ..........+  ..++...|+.||++.+.+.+.++.++   |++++.+.||.+.++................... ..+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~p  227 (275)
T PRK06940        149 EELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFA-KSP  227 (275)
T ss_pred             ccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhh-hCC
Confidence            00000000000  00134579999999999988887664   7999999999998874321111110001111111 112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +     ..+..++|+|.++.+++...
T Consensus       228 ~-----~r~~~peeia~~~~fL~s~~  248 (275)
T PRK06940        228 A-----GRPGTPDEIAALAEFLMGPR  248 (275)
T ss_pred             c-----ccCCCHHHHHHHHHHHcCcc
Confidence            2     25789999999999999643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=1.1e-19  Score=153.69  Aligned_cols=231  Identities=16%  Similarity=0.140  Sum_probs=154.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++.++...      ........++...+.++.++.+|++|.+++.++++  
T Consensus        11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~------~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792         11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASA------LDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCch------hHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999887541      01111112221223478889999999988887765  


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----C------CccEEEEeccceeeeccCC
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----G------TVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~------~~~~~v~~SS~~~~~~~~~  142 (285)
                          .+|+|||+||.....     ..+..+..+++|+.++.++++++...    .      .-+++|++||.....+.  
T Consensus        85 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--  162 (306)
T PRK07792         85 VGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP--  162 (306)
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC--
Confidence                479999999986531     11223578899999999998876421    0      02589999998754332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          +....|+.+|.+.+.+++.++.+   +|++++++.|+. ..+..........    ... 
T Consensus       163 --------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~~~~----~~~-  216 (306)
T PRK07792        163 --------------------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFGDAP----DVE-  216 (306)
T ss_pred             --------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhccccc----hhh-
Confidence                                12346999999999999888765   589999999983 2221100000000    000 


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEe-------------------ccccCHHHHHHHHHhhC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICS-------------------SHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~-------------------~~~~s~~e~~~~i~~~~  276 (285)
                              .....++.++|++.++.+++....  ..| ++.+.                   +..++..|+.+.+.+.+
T Consensus       217 --------~~~~~~~~pe~va~~v~~L~s~~~~~~tG~~~~v~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (306)
T PRK07792        217 --------AGGIDPLSPEHVVPLVQFLASPAAAEVNGQVFIVYGPMVTLVAAPVVERRFDADGDAWDPGELSATLRDYF  287 (306)
T ss_pred             --------hhccCCCCHHHHHHHHHHHcCccccCCCCCEEEEcCCeEEEEeeeeecceecCCCCCCCHHHHHHHHHHHh
Confidence                    011245689999999999886432  122 22221                   13478888888888874

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=4.2e-19  Score=146.53  Aligned_cols=211  Identities=14%  Similarity=0.074  Sum_probs=143.6

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||+  +.||.+++++|+++|++|++++|+.     ...+....+.+.. ...++.++.+|++|.++++++++
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~-----~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~   79 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGE-----RLEKEVRELADTL-EGQESLLLPCDVTSDEEITACFE   79 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcc-----cchHHHHHHHHHc-CCCceEEEecCCCCHHHHHHHHH
Confidence            46899999997  8999999999999999999988764     1112222222111 12468889999999998877764


Q ss_pred             -------CCCEEEEecccCCC-------C--CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF-------E--DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-------~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|++||+||....       .  ..+.+...+++|+.+...+.+++.+. .+-.++|++||.......    
T Consensus        80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~----  155 (257)
T PRK08594         80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVV----  155 (257)
T ss_pred             HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCC----
Confidence                   37999999986531       1  11122467889999988877776543 113689999997653221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.++   |++++.+.||.+.++.... ..... ....... .
T Consensus       156 ------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~~-~~~~~~~-~  214 (257)
T PRK08594        156 ------------------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKG-VGGFN-SILKEIE-E  214 (257)
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhh-hcccc-HHHHHHh-h
Confidence                              223569999999999998888764   7999999999998763211 00000 0011111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+.     ..+..++|+|+.+++++...
T Consensus       215 ~~p~-----~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        215 RAPL-----RRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             cCCc-----cccCCHHHHHHHHHHHcCcc
Confidence            1111     25788999999999999754

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2e-19  Score=142.86  Aligned_cols=186  Identities=19%  Similarity=0.143  Sum_probs=138.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---G   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~   82 (285)
                      |+++||||+|+||.++++.|+++ ++|++++|+.                      .  .+.+|++|.++++++++   .
T Consensus         1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~----------------------~--~~~~D~~~~~~~~~~~~~~~~   55 (199)
T PRK07578          1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSS----------------------G--DVQVDITDPASIRALFEKVGK   55 (199)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC----------------------C--ceEecCCChHHHHHHHHhcCC
Confidence            47999999999999999999998 9999999976                      1  35789999999988876   5


Q ss_pred             CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           83 CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        83 ~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                      +|+|||+||.....     ..+.....+++|+.++.++.+++.+. ....+++++||.....+.                
T Consensus        56 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~----------------  119 (199)
T PRK07578         56 VDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI----------------  119 (199)
T ss_pred             CCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC----------------
Confidence            89999999974431     11223577899999999999987653 113689999987643221                


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHH--cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCccee
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMV  234 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  234 (285)
                            +....|+.+|.+.+.+.+.++.+  .|++++.++||.+-.+...         ....       ++   ...++
T Consensus       120 ------~~~~~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~---------~~~~-------~~---~~~~~  174 (199)
T PRK07578        120 ------PGGASAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEK---------YGPF-------FP---GFEPV  174 (199)
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhh---------hhhc-------CC---CCCCC
Confidence                  23356999999999999988876  4899999999998654210         0000       01   11478


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEE
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYI  257 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~  257 (285)
                      .++|+|+.+..++.....+.+++
T Consensus       175 ~~~~~a~~~~~~~~~~~~g~~~~  197 (199)
T PRK07578        175 PAARVALAYVRSVEGAQTGEVYK  197 (199)
T ss_pred             CHHHHHHHHHHHhccceeeEEec
Confidence            99999999999998654444444

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.85  E-value=2.2e-19  Score=144.99  Aligned_cols=189  Identities=15%  Similarity=0.126  Sum_probs=140.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      ||+++||||+|+||++++++|+++|++|++++|+.        +....+...     +++++.+|++|.+.++++++   
T Consensus         1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~--------~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~   67 (222)
T PRK06953          1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDA--------AALAALQAL-----GAEALALDVADPASVAGLAWKLD   67 (222)
T ss_pred             CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCH--------HHHHHHHhc-----cceEEEecCCCHHHHHHHHHHhc
Confidence            36899999999999999999999999999999976        333333322     45688999999998888643   


Q ss_pred             --CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 --GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 --~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                        .+|+|||+++.....       ..+..+..++.|+.++.++++++.+.  ....++|++||.....+...        
T Consensus        68 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~--------  139 (222)
T PRK06953         68 GEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT--------  139 (222)
T ss_pred             CCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--------
Confidence              379999999986321       11223588999999999999988752  11357999998765433210        


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL  229 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                 ..+...|+.+|...+.+++.++.++ +++++.++||.+..+....                .       
T Consensus       140 -----------~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~~----------------~-------  185 (222)
T PRK06953        140 -----------GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGGA----------------Q-------  185 (222)
T ss_pred             -----------CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCCC----------------C-------
Confidence                       0112359999999999999888765 7999999999998874210                0       


Q ss_pred             CcceeeHHHHHHHHHHhhcCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~  250 (285)
                        ..+..++.++.+..++...
T Consensus       186 --~~~~~~~~~~~~~~~~~~~  204 (222)
T PRK06953        186 --AALDPAQSVAGMRRVIAQA  204 (222)
T ss_pred             --CCCCHHHHHHHHHHHHHhc
Confidence              2467788888888887654

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=2e-19  Score=149.53  Aligned_cols=219  Identities=13%  Similarity=0.051  Sum_probs=147.5

Q ss_pred             CCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||+  +.||.+++++|+++|++|+++.|+.     ...+....+.+.   ......+.+|++|.++++++++ 
T Consensus        10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~-----~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~   81 (272)
T PRK08159         10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGD-----ALKKRVEPLAAE---LGAFVAGHCDVTDEASIDAVFET   81 (272)
T ss_pred             CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCch-----HHHHHHHHHHHh---cCCceEEecCCCCHHHHHHHHHH
Confidence            5899999997  8999999999999999999887753     111222222211   1234568899999998888765 


Q ss_pred             ------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|++||+||....         ...+.++..+++|+.++..+++++.+. ..-+++|++||.......     
T Consensus        82 ~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~-----  156 (272)
T PRK08159         82 LEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVM-----  156 (272)
T ss_pred             HHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCC-----
Confidence                  37999999997531         111234588999999999999887653 113689999986543111     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||++.+.+.+.++.++   |++++++.||.+.++.... .... ..... .....
T Consensus       157 -----------------p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~-~~~~~-~~~~~  216 (272)
T PRK08159        157 -----------------PHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASG-IGDF-RYILK-WNEYN  216 (272)
T ss_pred             -----------------CcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhc-CCcc-hHHHH-HHHhC
Confidence                             233569999999999998888764   7999999999998753211 1111 00001 11111


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  261 (285)
                      .++.     .+..++|+|+++++++....  ..|.. .+.++
T Consensus       217 ~p~~-----r~~~peevA~~~~~L~s~~~~~itG~~i~vdgG  253 (272)
T PRK08159        217 APLR-----RTVTIEEVGDSALYLLSDLSRGVTGEVHHVDSG  253 (272)
T ss_pred             Cccc-----ccCCHHHHHHHHHHHhCccccCccceEEEECCC
Confidence            1222     56889999999999997543  24544 34444

>PRK05855 short chain dehydrogenase; Validated

Probab=99.85  E-value=1.1e-19  Score=167.03  Aligned_cols=215  Identities=18%  Similarity=0.100  Sum_probs=147.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .++++|||||||+||++++++|+++|++|++++|+.        +....+ ..+...+.++.++.+|++|++++.++++.
T Consensus       314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  385 (582)
T PRK05855        314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDE--------AAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW  385 (582)
T ss_pred             CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999976        222221 11111234688999999999988887753


Q ss_pred             -------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           83 -------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 -------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             +|+|||+||.....     ..+..+..+++|+.++.++.+++.    +.+..++||++||.+++.+.      
T Consensus       386 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~------  459 (582)
T PRK05855        386 VRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS------  459 (582)
T ss_pred             HHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC------
Confidence                   79999999985431     122335788899999998888754    33323699999998875433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC-CccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-AGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~~~~~~~  222 (285)
                                      +....|+.||++.+.+.+.++.+   .|+++++++||.|-++...... ...............
T Consensus       460 ----------------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  523 (582)
T PRK05855        460 ----------------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRA  523 (582)
T ss_pred             ----------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhh
Confidence                            23467999999999888887765   4899999999999876432210 000000000000000


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ...   .....+..+|+|+.+++++.++.
T Consensus       524 ~~~---~~~~~~~p~~va~~~~~~~~~~~  549 (582)
T PRK05855        524 DKL---YQRRGYGPEKVAKAIVDAVKRNK  549 (582)
T ss_pred             hhh---ccccCCCHHHHHHHHHHHHHcCC
Confidence            000   00123578999999999998654

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.85  E-value=4.5e-19  Score=146.32  Aligned_cols=211  Identities=15%  Similarity=0.088  Sum_probs=141.8

Q ss_pred             CCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccc---cCcc-chhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEH---RNSK-DLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .+|+++||||||  .||++++++|+++|++|+++.|.......   ...+ ......+....+.++.++.+|++|.+++.
T Consensus         5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~   84 (256)
T PRK12859          5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK   84 (256)
T ss_pred             CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            368999999995  89999999999999999987653210000   0001 11111122222347888999999999888


Q ss_pred             HHhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccC
Q 023244           78 AAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++++       .+|+|||+||.....     ..+..+..+++|+.+...+.+++    ++.+ .++||++||..+.... 
T Consensus        85 ~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-  162 (256)
T PRK12859         85 ELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQFQGPM-  162 (256)
T ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEcccccCCCC-
Confidence            7764       369999999975431     11223577999999888775444    3333 4699999998653221 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           ++...|+.+|.+.+.+.+.++.+   .|++++.++||.+.++....    ..   ....
T Consensus       163 ---------------------~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~----~~---~~~~  214 (256)
T PRK12859        163 ---------------------VGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTE----EI---KQGL  214 (256)
T ss_pred             ---------------------CCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCH----HH---HHHH
Confidence                                 23467999999999999888766   48999999999997764211    11   1111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .. ..++     ..+..++|+|+++.+++...
T Consensus       215 ~~-~~~~-----~~~~~~~d~a~~~~~l~s~~  240 (256)
T PRK12859        215 LP-MFPF-----GRIGEPKDAARLIKFLASEE  240 (256)
T ss_pred             Hh-cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence            11 1112     14678999999999998653

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.85  E-value=8.7e-20  Score=149.82  Aligned_cols=198  Identities=23%  Similarity=0.249  Sum_probs=139.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC-CCCCEEEEecCCC--ChhhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG-ASERLRIFHADLS--HPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~--d~~~~~~~   79 (285)
                      .+|+|+||||+|+||.+++++|++.|++|++++|+.        +.... ..++.. ...++.++.+|++  +.+++.++
T Consensus        11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~   82 (247)
T PRK08945         11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTE--------EKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQL   82 (247)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCH--------HHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHH
Confidence            468999999999999999999999999999999986        22211 122211 1235677788886  55544444


Q ss_pred             hc-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCC
Q 023244           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      ++       .+|+|||+|+....      ...+..+..+++|+.++.++++++.    +.+ .++||++||.....+.  
T Consensus        83 ~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~--  159 (247)
T PRK08945         83 ADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGR--  159 (247)
T ss_pred             HHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCC--
Confidence            32       47999999987432      1112235789999999888888774    344 6899999997654222  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          +....|+.||.+.+.+++.++.++   ++++++++||.+-++......+.          
T Consensus       160 --------------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~----------  209 (247)
T PRK08945        160 --------------------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPG----------  209 (247)
T ss_pred             --------------------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCc----------
Confidence                                223469999999999999887765   68999999999876532111000          


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                       ..       ...+...+|+++.+.+++...
T Consensus       210 -~~-------~~~~~~~~~~~~~~~~~~~~~  232 (247)
T PRK08945        210 -ED-------PQKLKTPEDIMPLYLYLMGDD  232 (247)
T ss_pred             -cc-------ccCCCCHHHHHHHHHHHhCcc
Confidence             00       114688899999999988644

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=4.6e-19  Score=146.54  Aligned_cols=208  Identities=13%  Similarity=0.025  Sum_probs=141.3

Q ss_pred             CCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||++  .||.++++.|+++|++|++.+|+.     ...+....+....  + ...++.+|++|+++++++++ 
T Consensus         8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-----~~~~~~~~l~~~~--g-~~~~~~~Dv~~~~~v~~~~~~   79 (260)
T PRK06603          8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-----VLEKRVKPLAEEI--G-CNFVSELDVTNPKSISNLFDD   79 (260)
T ss_pred             CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-----HHHHHHHHHHHhc--C-CceEEEccCCCHHHHHHHHHH
Confidence            57899999997  899999999999999999888764     1111222221111  1 22457899999998888775 


Q ss_pred             ------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|++||+|+....         ...+.+...+++|+.+...+++++.+. ..-+++|++||.......     
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~-----  154 (260)
T PRK06603         80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVI-----  154 (260)
T ss_pred             HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCC-----
Confidence                  37999999986431         011233578999999999988876432 113689999997643211     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||++.+.+.+.++.+   .|++++++.||.+.++.... ...... ....... .
T Consensus       155 -----------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~-~~~~~~-~~~~~~~-~  214 (260)
T PRK06603        155 -----------------PNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSA-IGDFST-MLKSHAA-T  214 (260)
T ss_pred             -----------------CcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhc-CCCcHH-HHHHHHh-c
Confidence                             22356999999999999888876   47999999999998763211 111111 1111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .++     ..+..++|+|+++.+++...
T Consensus       215 ~p~-----~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        215 APL-----KRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             CCc-----CCCCCHHHHHHHHHHHhCcc
Confidence            122     25788999999999999754

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.84  E-value=2.5e-19  Score=148.11  Aligned_cols=210  Identities=15%  Similarity=0.112  Sum_probs=144.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||+|.||+.+++.|+++|++|++++|+.        +....+ .++.. ...++.++.+|++|.+++.++++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDA--------DALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA   77 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence            468999999999999999999999999999999976        222221 11111 13468889999999998888775


Q ss_pred             ---CCCEEEEecccCCC---C--CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ---GCTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ---~~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                         .+|++||+||....   .  ..+..+..+++|+.+...+.+++.    +.+ .+++|++||.....+.         
T Consensus        78 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~---------  147 (259)
T PRK06125         78 EAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPD---------  147 (259)
T ss_pred             HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCC---------
Confidence               48999999987532   1  112235778999999888877763    333 4689999987543211         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCc----c--HHHHHHHHhc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAG----S--VRSSLALILG  220 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~----~--~~~~~~~~~~  220 (285)
                                   +....|+.+|.+.+.+.+.++.+   .|++++.++||.+.++........    .  ......... 
T Consensus       148 -------------~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-  213 (259)
T PRK06125        148 -------------ADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELL-  213 (259)
T ss_pred             -------------CCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHh-
Confidence                         22356999999999999888765   389999999999987732110000    0  000000110 


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ...++     ..+..++|+|+++.+++...
T Consensus       214 ~~~~~-----~~~~~~~~va~~~~~l~~~~  238 (259)
T PRK06125        214 AGLPL-----GRPATPEEVADLVAFLASPR  238 (259)
T ss_pred             ccCCc-----CCCcCHHHHHHHHHHHcCch
Confidence            11111     25789999999999998643

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.84  E-value=5.8e-19  Score=145.89  Aligned_cols=208  Identities=15%  Similarity=0.103  Sum_probs=141.3

Q ss_pred             CCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||++  .||+++++.|+++|++|++.+|+.        +.....+++....+.+.++.+|++|+++++.+++ 
T Consensus         6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~   77 (262)
T PRK07984          6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND--------KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAE   77 (262)
T ss_pred             CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch--------hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHH
Confidence            57899999985  999999999999999999888764        1112222221112346678899999998888774 


Q ss_pred             ------CCCEEEEecccCCCC----------CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDFE----------DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|++||+||.....          ..+.++..+++|+.+...+.+++... ..-.++|++||.......    
T Consensus        78 ~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~----  153 (262)
T PRK07984         78 LGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI----  153 (262)
T ss_pred             HHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCC----
Confidence                  369999999974321          01122467889999888887776532 112689999987642111    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.+.   |++++++.||.+..+.... .... ......... 
T Consensus       154 ------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~~-~~~~~~~~~-  212 (262)
T PRK07984        154 ------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASG-IKDF-RKMLAHCEA-  212 (262)
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhc-CCch-HHHHHHHHH-
Confidence                              223469999999999999998764   7999999999998753211 1111 111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..+.     ..+..++|++..+++++...
T Consensus       213 ~~p~-----~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        213 VTPI-----RRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             cCCC-----cCCCCHHHHHHHHHHHcCcc
Confidence            1122     25789999999999999754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.84  E-value=7.8e-20  Score=148.46  Aligned_cols=169  Identities=18%  Similarity=0.175  Sum_probs=125.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|.|+|||||+.||.++|.+|+++|.+++.+.|..     ...+.. +.+.+..... ++.++++|++|.++..+.++ 
T Consensus        11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~-----rrl~~v~~~l~~~~~~~-~v~~~~~Dvs~~~~~~~~~~~   84 (282)
T KOG1205|consen   11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRA-----RRLERVAEELRKLGSLE-KVLVLQLDVSDEESVKKFVEW   84 (282)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhh-----hhHHHHHHHHHHhCCcC-ccEEEeCccCCHHHHHHHHHH
Confidence            578999999999999999999999999988888876     222222 3333332222 69999999999998887764 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            ++|++|||||+...     .........+++|+.|+..+.+++    ++.+ -++||.+||..+....      
T Consensus        85 ~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~------  157 (282)
T KOG1205|consen   85 AIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPL------  157 (282)
T ss_pred             HHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCC------
Confidence                  57999999998654     122333568999999877766665    4554 5899999999875444      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC-----CcEEEeccCceecCC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG-----LDLVTLIPSMVVGPF  202 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-----i~~~i~Rp~~v~g~~  202 (285)
                                      |....|.+||++.+.+...+.++..     +.+ ++-||.|-+..
T Consensus       158 ----------------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~  201 (282)
T KOG1205|consen  158 ----------------PFRSIYSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEF  201 (282)
T ss_pred             ----------------CcccccchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecc
Confidence                            2334799999999999998888852     222 58899986653

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.84  E-value=7.8e-19  Score=147.15  Aligned_cols=223  Identities=15%  Similarity=0.118  Sum_probs=146.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCC-ccccC-ccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELD-PEHRN-SKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||++.||+.++++|+++|++|++++|+... ..... ........++...+.++.++.+|++|.+++.++++
T Consensus         5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   84 (286)
T PRK07791          5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD   84 (286)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence            46899999999999999999999999999998875310 00000 11111122222223467888999999988777664


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cC-----CccEEEEeccceeeecc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SG-----TVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-----~~~~~v~~SS~~~~~~~  140 (285)
                             .+|++||+||....     ...+.++..+++|+.++..+++++..    ..     ..++||++||.....+.
T Consensus        85 ~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~  164 (286)
T PRK07791         85 AAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGS  164 (286)
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCC
Confidence                   36999999997542     11223358899999999888877642    21     02589999998754332


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            +....|+.||.+.+.+.+.++.+   .|++++.|.|| +..+...    ....   . 
T Consensus       165 ----------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~----~~~~---~-  213 (286)
T PRK07791        165 ----------------------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTE----TVFA---E-  213 (286)
T ss_pred             ----------------------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcch----hhHH---H-
Confidence                                  22356999999999998888776   48999999998 5443210    0111   1 


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  261 (285)
                      ..... .   .....+..++|+|.++++++....  ..|.+ .+.++
T Consensus       214 ~~~~~-~---~~~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG  256 (286)
T PRK07791        214 MMAKP-E---EGEFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGG  256 (286)
T ss_pred             HHhcC-c---ccccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCC
Confidence            11111 0   111246789999999999996532  34544 45444

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.83  E-value=1.7e-19  Score=153.03  Aligned_cols=229  Identities=18%  Similarity=0.126  Sum_probs=148.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||||+||.+++++|+++|++|++++|+..    ...+....+... ..+.++.++.+|++|.++++++++  
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~----~~~~~~~~l~~~-~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRA----KGEAAVAAIRTA-VPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHh-CCCCceEEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999761    001111112111 113368899999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHHh---cCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 -----GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCLK---SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~---~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                           .+|++||+||.....    ..+..+..+++|+.+...+.+.+..   .+ ..++|++||.....+.. ....+.+
T Consensus        88 ~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~-~~~~~~~  165 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAI-NWDDLNW  165 (313)
T ss_pred             HHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCc-Ccccccc
Confidence                 379999999986431    2234468899999998777766642   23 36899999987543321 1111222


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCC--C----ccHHHHHHHH
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKF--A----GSVRSSLALI  218 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~--~----~~~~~~~~~~  218 (285)
                      +..         ..+...|+.||.+.+.+.++++++     .|++++++.||.+.++......  .    ..+..+...+
T Consensus       166 ~~~---------~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  236 (313)
T PRK05854        166 ERS---------YAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSL  236 (313)
T ss_pred             ccc---------CcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHH
Confidence            111         123457999999999999988764     3799999999999876432110  0    0111111111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCCC-CceE
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA-KGRY  256 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~  256 (285)
                      ....        .-+-.+++.|...++++..+.. .|.|
T Consensus       237 ~~~~--------~~~~~~~~ga~~~l~~a~~~~~~~g~~  267 (313)
T PRK05854        237 SARG--------FLVGTVESAILPALYAATSPDAEGGAF  267 (313)
T ss_pred             hhcc--------cccCCHHHHHHHhhheeeCCCCCCCcE
Confidence            1100        0134677888888888876543 3444

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.83  E-value=6.7e-19  Score=145.55  Aligned_cols=208  Identities=15%  Similarity=0.094  Sum_probs=141.4

Q ss_pred             CCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||  ++.||.+++++|+++|++|++++|..     ...+....+.+..   .....+.+|++|+++++++++ 
T Consensus         6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~   77 (260)
T PRK06997          6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGD-----RFKDRITEFAAEF---GSDLVFPCDVASDEQIDALFAS   77 (260)
T ss_pred             CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccch-----HHHHHHHHHHHhc---CCcceeeccCCCHHHHHHHHHH
Confidence            588999996  67999999999999999999887643     1112222222111   123467899999998888775 


Q ss_pred             ------CCCEEEEecccCCC----------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|++||+||....          ...+.++..+++|+.+...+.+++.+. ..-+++|++||.......    
T Consensus        78 ~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~----  153 (260)
T PRK06997         78 LGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVV----  153 (260)
T ss_pred             HHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCC----
Confidence                  37999999997532          011223477899999998888887653 113689999987643211    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||++.+.+.+.++.+.   |++++.+.||.+.++.... ... .......... 
T Consensus       154 ------------------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~-~~~-~~~~~~~~~~-  212 (260)
T PRK06997        154 ------------------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASG-IKD-FGKILDFVES-  212 (260)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcc-ccc-hhhHHHHHHh-
Confidence                              223569999999999999888763   7999999999998753221 111 0111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..++.     .+..++|+++++.+++...
T Consensus       213 ~~p~~-----r~~~pedva~~~~~l~s~~  236 (260)
T PRK06997        213 NAPLR-----RNVTIEEVGNVAAFLLSDL  236 (260)
T ss_pred             cCccc-----ccCCHHHHHHHHHHHhCcc
Confidence            11222     5789999999999999754

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.83  E-value=9e-20  Score=150.53  Aligned_cols=207  Identities=16%  Similarity=0.106  Sum_probs=139.4

Q ss_pred             eEEEecCCchhHHHHHHHHHH----cCCeEEEEecCCCCccccCccchhhh-hcCCC--CCCCEEEEecCCCChhhHHHH
Q 023244            7 RVCVTGGTGFIASWLIMRLLD----HGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .++||||+++||.+++++|++    .|++|++++|+.        +....+ .++..  ...++.++.+|++|.++++++
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~   73 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARND--------EALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQL   73 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCH--------HHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHH
Confidence            589999999999999999997    799999999976        222211 11111  123688899999999988877


Q ss_pred             hcC-----------CCEEEEecccCCC-----C---CCChHHHHHHHHHHHHHHHHHHHHhc-----CCccEEEEeccce
Q 023244           80 IAG-----------CTGVLHVATPVDF-----E---DKEPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTSSNA  135 (285)
Q Consensus        80 ~~~-----------~d~vih~a~~~~~-----~---~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~  135 (285)
                      ++.           .|+|||+||....     .   ..+..+..+++|+.++..+.+.+.+.     +..+++|++||..
T Consensus        74 ~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~  153 (256)
T TIGR01500        74 LKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLC  153 (256)
T ss_pred             HHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHH
Confidence            642           1589999997432     1   11233578999999987777665432     2135899999986


Q ss_pred             eeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc-cH
Q 023244          136 AVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG-SV  211 (285)
Q Consensus       136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~-~~  211 (285)
                      .....                      +....|+.||.+.+.+.+.++.+.   |++++.+.||.+-++........ .-
T Consensus       154 ~~~~~----------------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~  211 (256)
T TIGR01500       154 AIQPF----------------------KGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVD  211 (256)
T ss_pred             hCCCC----------------------CCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCC
Confidence            54222                      234579999999999999988774   79999999999977632110000 00


Q ss_pred             HHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          212 RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      ......... ..+     ...+..++|+|..+++++.+
T Consensus       212 ~~~~~~~~~-~~~-----~~~~~~p~eva~~~~~l~~~  243 (256)
T TIGR01500       212 PDMRKGLQE-LKA-----KGKLVDPKVSAQKLLSLLEK  243 (256)
T ss_pred             hhHHHHHHH-HHh-----cCCCCCHHHHHHHHHHHHhc
Confidence            000000000 001     11478999999999999963

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.83  E-value=1.1e-18  Score=145.00  Aligned_cols=205  Identities=17%  Similarity=0.113  Sum_probs=136.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC-CCCCEEEEecCCCChhhH----HHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG-ASERLRIFHADLSHPDGF----DAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~----~~~   79 (285)
                      +.++||||+|+||++++++|+++|++|+++.|+.+       +.... ..++.. ...++.++.+|++|.+.+    +++
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~   74 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA-------AAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAI   74 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH-------HHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHH
Confidence            57999999999999999999999999999876531       12211 122211 123566789999998744    333


Q ss_pred             h-------cCCCEEEEecccCCC------CCCC----------hHHHHHHHHHHHHHHHHHHHHhcC---------CccE
Q 023244           80 I-------AGCTGVLHVATPVDF------EDKE----------PEEVITQRAINGTLGILKSCLKSG---------TVKR  127 (285)
Q Consensus        80 ~-------~~~d~vih~a~~~~~------~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~  127 (285)
                      +       ..+|+|||+||....      +..+          .....+++|+.++..+.+++.+..         ...+
T Consensus        75 ~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~  154 (267)
T TIGR02685        75 IDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLS  154 (267)
T ss_pred             HHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeE
Confidence            3       248999999997432      1111          134779999999999888764321         1246


Q ss_pred             EEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCC
Q 023244          128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFIC  204 (285)
Q Consensus       128 ~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~  204 (285)
                      +|++||.......                      ++...|+.||.+.+.+++.++.+   .|+++++++||.+..|...
T Consensus       155 iv~~~s~~~~~~~----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~  212 (267)
T TIGR02685       155 IVNLCDAMTDQPL----------------------LGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM  212 (267)
T ss_pred             EEEehhhhccCCC----------------------cccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc
Confidence            8888876532111                      23457999999999999998877   4899999999998765321


Q ss_pred             CCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          205 PKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                         ....   ...... ..++    ...+..++|+++++++++..+
T Consensus       213 ---~~~~---~~~~~~-~~~~----~~~~~~~~~va~~~~~l~~~~  247 (267)
T TIGR02685       213 ---PFEV---QEDYRR-KVPL----GQREASAEQIADVVIFLVSPK  247 (267)
T ss_pred             ---chhH---HHHHHH-hCCC----CcCCCCHHHHHHHHHHHhCcc
Confidence               1111   111111 1111    013579999999999999764

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.83  E-value=3.9e-19  Score=165.58  Aligned_cols=197  Identities=17%  Similarity=0.155  Sum_probs=145.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||||+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.++++++++ 
T Consensus       370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~  441 (657)
T PRK07201        370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNG--------EALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD  441 (657)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            357999999999999999999999999999999976        222221 1111123478899999999998888776 


Q ss_pred             ------CCCEEEEecccCCC-----CC--CChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF-----ED--KEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~--~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|++||+||....     ..  .+..+..+++|+.++.++.+++    ++.+ .++||++||..++...    
T Consensus       442 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  516 (657)
T PRK07201        442 ILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNA----  516 (657)
T ss_pred             HHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCC----
Confidence                  47999999997432     11  1223578999999988876665    4445 6799999998765432    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+++.++.++   |+++++++||.|.++...+..             .
T Consensus       517 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~-------------~  565 (657)
T PRK07201        517 ------------------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTK-------------R  565 (657)
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCccc-------------c
Confidence                              233569999999999998887664   899999999999887532210             0


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                         +.   ....+.++++|+.++..+...
T Consensus       566 ---~~---~~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        566 ---YN---NVPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             ---cc---CCCCCCHHHHHHHHHHHHHhC
Confidence               00   013578899999999887643

>PRK05599 hypothetical protein; Provisional

Probab=99.82  E-value=2.1e-18  Score=141.50  Aligned_cols=202  Identities=16%  Similarity=0.116  Sum_probs=138.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCC-CCCEEEEecCCCChhhHHHHhc--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGA-SERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      |+++||||++.||..++++|+ +|++|++++|+.        +....+ .++... ...+.++.+|++|.++++++++  
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   71 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRP--------EAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQT   71 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCH--------HHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHH
Confidence            579999999999999999998 599999999976        222221 122111 2347889999999988877654  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||.....     .........++|+.+...++.    .+.+.+.-+++|++||.....+.       
T Consensus        72 ~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-------  144 (246)
T PRK05599         72 QELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR-------  144 (246)
T ss_pred             HHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC-------
Confidence                 379999999985431     111123556778777665544    44443223689999998654222       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|...+.+.+.++.+.   |++++.+.||.+.++.....              .+..
T Consensus       145 ---------------~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~--------------~~~~  195 (246)
T PRK05599        145 ---------------RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM--------------KPAP  195 (246)
T ss_pred             ---------------cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC--------------CCCC
Confidence                           223569999999999998888763   79999999999987632110              0000


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS  259 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  259 (285)
                             -...++|+|+.+++++.+......+...
T Consensus       196 -------~~~~pe~~a~~~~~~~~~~~~~~~~~~~  223 (246)
T PRK05599        196 -------MSVYPRDVAAAVVSAITSSKRSTTLWIP  223 (246)
T ss_pred             -------CCCCHHHHHHHHHHHHhcCCCCceEEeC
Confidence                   1257899999999999876443444443

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.82  E-value=5.2e-19  Score=143.14  Aligned_cols=167  Identities=18%  Similarity=0.178  Sum_probs=123.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      ||+++||||+|+||++++++|+++|++|++++|++        +....+.+.    .++.++.+|++|.+++.++++   
T Consensus         1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~~~~   68 (225)
T PRK08177          1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGP--------QQDTALQAL----PGVHIEKLDMNDPASLDQLLQRLQ   68 (225)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCC--------cchHHHHhc----cccceEEcCCCCHHHHHHHHHHhh
Confidence            36899999999999999999999999999999987        222223222    256778899999988877776   


Q ss_pred             --CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 --GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 --~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                        .+|+|||+||.....       ..+.....+++|+.++..+.+++.+.  .....++++||.........        
T Consensus        69 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~--------  140 (225)
T PRK08177         69 GQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPD--------  140 (225)
T ss_pred             cCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCC--------
Confidence              479999999875321       11223467788999998888887643  11357888888542211100        


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCC
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~  202 (285)
                                 ......|+.+|.+.+.+++.++.++   +++++.++||.+-++.
T Consensus       141 -----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~  184 (225)
T PRK08177        141 -----------GGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM  184 (225)
T ss_pred             -----------CCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence                       0123459999999999999887664   6999999999998774

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.82  E-value=1e-18  Score=148.39  Aligned_cols=195  Identities=19%  Similarity=0.238  Sum_probs=136.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC--CCCCEEEEecCCCC--hhhHHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSH--PDGFDAA   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d--~~~~~~~   79 (285)
                      ++.++||||||+||++++++|+++|++|++++|+.        +....+ .++..  ...++..+.+|+++  .+.++++
T Consensus        53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~--------~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l  124 (320)
T PLN02780         53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNP--------DKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRI  124 (320)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHH
Confidence            57999999999999999999999999999999987        222221 11111  12357778899985  2333333


Q ss_pred             ---hcC--CCEEEEecccCCC-----C--CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           80 ---IAG--CTGVLHVATPVDF-----E--DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ---~~~--~d~vih~a~~~~~-----~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                         +.+  +|++||+||....     .  ..+..+..+++|+.++..+.+++.    +.+ .+++|++||..++....  
T Consensus       125 ~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~--  201 (320)
T PLN02780        125 KETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPS--  201 (320)
T ss_pred             HHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCC--
Confidence               333  5699999997532     1  112234789999999988888764    344 57999999987642110  


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                        .+....|+.||.+.+.+.+.++.+.   |++++++.||.+-++.....              
T Consensus       202 ------------------~p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--------------  249 (320)
T PLN02780        202 ------------------DPLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--------------  249 (320)
T ss_pred             ------------------CccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--------------
Confidence                              0224579999999999998888774   79999999999987642110              


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      .. .      .-...++++|+.++..+..
T Consensus       250 ~~-~------~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        250 RS-S------FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             CC-C------CCCCCHHHHHHHHHHHhCC
Confidence            00 0      0135789999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=99.82  E-value=1.2e-18  Score=158.02  Aligned_cols=210  Identities=17%  Similarity=0.153  Sum_probs=147.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|+++||||+++||.++++.|+++|++|++++|+.        +....+ .+.   +.++.++.+|++|++++.++
T Consensus         1 ~~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~   69 (520)
T PRK06484          1 SKAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNV--------ERARERADSL---GPDHHALAMDVSDEAQIREG   69 (520)
T ss_pred             CCCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---CCceeEEEeccCCHHHHHHH
Confidence            445678999999999999999999999999999999976        222222 222   23677899999999988877


Q ss_pred             hc-------CCCEEEEecccCCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccC
Q 023244           80 IA-------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++       .+|++||+||....       ...+..+..+++|+.++..+++++.+.    +...++|++||....... 
T Consensus        70 ~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~-  148 (520)
T PRK06484         70 FEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL-  148 (520)
T ss_pred             HHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCC-
Confidence            65       37999999987321       111223588999999999988887643    312499999998764332 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           +....|+.+|...+.+.+.++.+.   +++++.++||.+.++............. ...
T Consensus       149 ---------------------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~-~~~  206 (520)
T PRK06484        149 ---------------------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDP-SAV  206 (520)
T ss_pred             ---------------------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhh-HHH
Confidence                                 223569999999999998888764   7999999999997764322111000000 000


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      . ...+.     ..+..++|++.++.+++...
T Consensus       207 ~-~~~~~-----~~~~~~~~va~~v~~l~~~~  232 (520)
T PRK06484        207 R-SRIPL-----GRLGRPEEIAEAVFFLASDQ  232 (520)
T ss_pred             H-hcCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence            0 00111     14678999999999988753

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=99.82  E-value=2.6e-18  Score=127.88  Aligned_cols=202  Identities=17%  Similarity=0.181  Sum_probs=147.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |||.|+||||.+|+.|++++.++||+|++++|++        .+....       +.+..++.|+.|++.+.+.+.+.|+
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~--------~K~~~~-------~~~~i~q~Difd~~~~a~~l~g~Da   65 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNA--------SKLAAR-------QGVTILQKDIFDLTSLASDLAGHDA   65 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeCh--------Hhcccc-------ccceeecccccChhhhHhhhcCCce
Confidence            5899999999999999999999999999999998        222211       3678899999999999999999999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      ||..-+....   .+.+.    .......|++.++..+ +.|++.++.++..+-.+. ...++-..           -|.
T Consensus        66 VIsA~~~~~~---~~~~~----~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g-~rLvD~p~-----------fP~  125 (211)
T COG2910          66 VISAFGAGAS---DNDEL----HSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEG-TRLVDTPD-----------FPA  125 (211)
T ss_pred             EEEeccCCCC---ChhHH----HHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCC-ceeecCCC-----------Cch
Confidence            9987665432   11112    2344677888888888 999999998887655433 22232222           234


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF  245 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~  245 (285)
                      ..|..++..+|. +..+..+.++.|+.+.|+..+-|+.......         .++...+.....-++|+..|.|.+++.
T Consensus       126 ey~~~A~~~ae~-L~~Lr~~~~l~WTfvSPaa~f~PGerTg~yr---------lggD~ll~n~~G~SrIS~aDYAiA~lD  195 (211)
T COG2910         126 EYKPEALAQAEF-LDSLRAEKSLDWTFVSPAAFFEPGERTGNYR---------LGGDQLLVNAKGESRISYADYAIAVLD  195 (211)
T ss_pred             hHHHHHHHHHHH-HHHHhhccCcceEEeCcHHhcCCccccCceE---------eccceEEEcCCCceeeeHHHHHHHHHH
Confidence            557888888884 3455556679999999999999976554211         222222222334489999999999999


Q ss_pred             hhcCCCC
Q 023244          246 LLEYPDA  252 (285)
Q Consensus       246 ~~~~~~~  252 (285)
                      .++++..
T Consensus       196 e~E~~~h  202 (211)
T COG2910         196 ELEKPQH  202 (211)
T ss_pred             HHhcccc
Confidence            9998764

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.82  E-value=2.1e-18  Score=153.62  Aligned_cols=215  Identities=18%  Similarity=0.126  Sum_probs=146.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++++++||||+|+||..++++|+++|++|++++|..      ..+....+ .+.     +...+.+|++|.+++.++++ 
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~------~~~~l~~~~~~~-----~~~~~~~Dv~~~~~~~~~~~~  277 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPA------AGEALAAVANRV-----GGTALALDITAPDAPARIAEH  277 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCc------cHHHHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHH
Confidence            357999999999999999999999999999998854      11111111 222     34578899999988877765 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+|+.....     ..+..+..+++|+.++.++.+++....   +.++||++||...+.+.       
T Consensus       278 ~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~-------  350 (450)
T PRK08261        278 LAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN-------  350 (450)
T ss_pred             HHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-------
Confidence                  479999999976431     122335788999999999999987632   13689999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|...+.+++.++.+   .|++++++.||.+-.+.... .+........    ....
T Consensus       351 ---------------~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~-~~~~~~~~~~----~~~~  410 (450)
T PRK08261        351 ---------------RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAA-IPFATREAGR----RMNS  410 (450)
T ss_pred             ---------------CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhc-cchhHHHHHh----hcCC
Confidence                           22356999999888887777655   48999999999986543211 1111111000    0011


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                           .......+|+++++.+++.....  .|. +.+.++
T Consensus       411 -----l~~~~~p~dva~~~~~l~s~~~~~itG~~i~v~g~  445 (450)
T PRK08261        411 -----LQQGGLPVDVAETIAWLASPASGGVTGNVVRVCGQ  445 (450)
T ss_pred             -----cCCCCCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence                 11345678999999999864332  344 445444

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.81  E-value=4.2e-18  Score=140.50  Aligned_cols=219  Identities=16%  Similarity=0.065  Sum_probs=145.0

Q ss_pred             CCCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+++||||  ++.||.+++++|+++|++|++++|+.      +.+....+. +.   ..++.++.+|++|.+++++++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~------~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~   76 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGR------ALRLTERIAKRL---PEPAPVLELDVTNEEHLASLA   76 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCcc------chhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHH
Confidence            4589999999  89999999999999999999998754      112222222 22   125678899999999888776


Q ss_pred             c-------CCCEEEEecccCCC-------CCC--ChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF-------EDK--EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~-------~~~--~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|++||+||....       .+.  +.....+++|+.+...+.+++... .+-+++|++|+.... .    
T Consensus        77 ~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~~-~----  151 (256)
T PRK07889         77 DRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDATV-A----  151 (256)
T ss_pred             HHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecccc-c----
Confidence            4       37999999997531       111  222467899999988888776543 112588888764311 0    


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                        .+....|+.||+..+.+.+.++.+   .|++++.+.||.+.++.... .... ........ 
T Consensus       152 ------------------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~-~~~~-~~~~~~~~-  210 (256)
T PRK07889        152 ------------------WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKA-IPGF-ELLEEGWD-  210 (256)
T ss_pred             ------------------CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhc-ccCc-HHHHHHHH-
Confidence                              022345999999999988888776   48999999999998864221 1111 11111111 


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--CceE-EEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRY-ICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~-~~~~~  261 (285)
                      ...++    .+.+..++|+|+.+++++.....  .|.+ .+.++
T Consensus       211 ~~~p~----~~~~~~p~evA~~v~~l~s~~~~~~tG~~i~vdgg  250 (256)
T PRK07889        211 ERAPL----GWDVKDPTPVARAVVALLSDWFPATTGEIVHVDGG  250 (256)
T ss_pred             hcCcc----ccccCCHHHHHHHHHHHhCcccccccceEEEEcCc
Confidence            11111    11468899999999999975432  4543 44443

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.81  E-value=4.1e-18  Score=144.57  Aligned_cols=238  Identities=16%  Similarity=0.115  Sum_probs=146.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      |+|+++|||||+.||.+++++|+++| ++|++++|+.        +... ...++.....++.++.+|++|.++++++++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   73 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDF--------LKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQ   73 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHH
Confidence            46799999999999999999999999 9999999976        2221 122222223467888999999988777664


Q ss_pred             -------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHH----hcC-CccEEEEeccceeeeccCC-
Q 023244           82 -------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCL----KSG-TVKRVVYTSSNAAVFYNDK-  142 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~~v~~SS~~~~~~~~~-  142 (285)
                             .+|++||+||.....      ..+..+..+++|+.+...+.+++.    +.+ ..++||++||...+..... 
T Consensus        74 ~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~  153 (314)
T TIGR01289        74 QFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAG  153 (314)
T ss_pred             HHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCC
Confidence                   379999999974321      112345789999999877766543    332 1369999999876432100 


Q ss_pred             CC-cccccCC-------CCchh--hhhhcCCCCchhHhhHHHHHHHHHHHHHH----cCCcEEEeccCcee-cCCCCCCC
Q 023244          143 DV-DMMDETF-------WSDVD--YIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVV-GPFICPKF  207 (285)
Q Consensus       143 ~~-~~~~e~~-------~~~~~--~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~v~-g~~~~~~~  207 (285)
                      .. ...+..+       +....  .......+...|+.||.+...+.+.++++    .|++++.++||.|. ++......
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~  233 (314)
T TIGR01289       154 NVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHV  233 (314)
T ss_pred             cCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccccc
Confidence            00 0000000       00000  00000123457999999988888887765    37999999999995 44322111


Q ss_pred             CccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceEE
Q 023244          208 AGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYI  257 (285)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~  257 (285)
                       ...........  ...     ...+..+++.|+.++.++....  .+|.|.
T Consensus       234 -~~~~~~~~~~~--~~~-----~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~  277 (314)
T TIGR01289       234 -PLFRTLFPPFQ--KYI-----TKGYVSEEEAGERLAQVVSDPKLKKSGVYW  277 (314)
T ss_pred             -HHHHHHHHHHH--HHH-----hccccchhhhhhhhHHhhcCcccCCCceee
Confidence             11111000000  000     0136789999999999887543  345554

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.81  E-value=1.3e-18  Score=140.55  Aligned_cols=185  Identities=15%  Similarity=0.093  Sum_probs=136.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc----
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----   81 (285)
                      |+++||||+|+||+++++.|+++|++|++++|+.        ++...+.+..    ++.++.+|++|.++++++++    
T Consensus         1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~--------~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~~   68 (223)
T PRK05884          1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR--------DDLEVAAKEL----DVDAIVCDNTDPASLEEARGLFPH   68 (223)
T ss_pred             CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc----cCcEEecCCCCHHHHHHHHHHHhh
Confidence            3699999999999999999999999999999976        3332222111    35678899999998888775    


Q ss_pred             CCCEEEEecccCCC-------C---CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 GCTGVLHVATPVDF-------E---DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 ~~d~vih~a~~~~~-------~---~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                      .+|++||+|+....       .   ..+.+...+++|+.++.++++++.+. ..-+++|++||...              
T Consensus        69 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--------------  134 (223)
T PRK05884         69 HLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP--------------  134 (223)
T ss_pred             cCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------------
Confidence            47999999974210       0   11234588999999999999987653 11368999998641              


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  +....|+.||++.+.+.+.++.+   .|++++.+.||.+.++...            .....      
T Consensus       135 ------------~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~------------~~~~~------  184 (223)
T PRK05884        135 ------------PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYD------------GLSRT------  184 (223)
T ss_pred             ------------CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhh------------hccCC------
Confidence                        11246999999999999888776   4799999999999765210            00000      


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                          ....++|+++.+.+++...
T Consensus       185 ----p~~~~~~ia~~~~~l~s~~  203 (223)
T PRK05884        185 ----PPPVAAEIARLALFLTTPA  203 (223)
T ss_pred             ----CCCCHHHHHHHHHHHcCch
Confidence                1127899999999998754

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.80  E-value=5.2e-18  Score=136.70  Aligned_cols=200  Identities=13%  Similarity=0.102  Sum_probs=146.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .++.||||||++.+|+.++.+|+++|..+.+.+.+..    ...+..+.....    .+++.+.+|++|++++.++.+  
T Consensus        37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~----~~~etv~~~~~~----g~~~~y~cdis~~eei~~~a~~V  108 (300)
T KOG1201|consen   37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQ----GNEETVKEIRKI----GEAKAYTCDISDREEIYRLAKKV  108 (300)
T ss_pred             cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEecccc----chHHHHHHHHhc----CceeEEEecCCCHHHHHHHHHHH
Confidence            4679999999999999999999999998888888762    122222223222    278999999999998888765  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHH----HHHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLG----ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||+...     ..++..+..+++|+.+...    ++..+.+.. -+++|.++|..+..+.       
T Consensus       109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~-------  180 (300)
T KOG1201|consen  109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGP-------  180 (300)
T ss_pred             HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCC-------
Confidence                 47999999998664     2334457889999887555    555555555 6799999999876554       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH------cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE------HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                     +....|..||.++....+.+..+      .|++.+.+.|+.+-......                
T Consensus       181 ---------------~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~----------------  229 (300)
T KOG1201|consen  181 ---------------AGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDG----------------  229 (300)
T ss_pred             ---------------ccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCC----------------
Confidence                           33456999999887777666544      26999999999986443211                


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                      ..++  ...+..+.++.+|+.++.++.....
T Consensus       230 ~~~~--~~l~P~L~p~~va~~Iv~ai~~n~~  258 (300)
T KOG1201|consen  230 ATPF--PTLAPLLEPEYVAKRIVEAILTNQA  258 (300)
T ss_pred             CCCC--ccccCCCCHHHHHHHHHHHHHcCCc
Confidence            0011  1233678999999999999986544

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.80  E-value=7.1e-18  Score=137.87  Aligned_cols=187  Identities=15%  Similarity=0.094  Sum_probs=127.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+++||||+|+||+++++.|+++|++|++++|+..       +.......     .....+.+|++|.+++.+.+..+
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~-------~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~i   80 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKI-------NNSESNDE-----SPNEWIKWECGKEESLDKQLASL   80 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCch-------hhhhhhcc-----CCCeEEEeeCCCHHHHHHhcCCC
Confidence            3589999999999999999999999999999998751       11111111     12256789999999999888889


Q ss_pred             CEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           84 TGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        84 d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                      |++||+||.....  ..+.....+++|+.++.++++++.+.      +....++..||......                
T Consensus        81 DilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~----------------  144 (245)
T PRK12367         81 DVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP----------------  144 (245)
T ss_pred             CEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC----------------
Confidence            9999999975432  12233588999999999999886542      11223444454332211                


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHH---HHHHH---HcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAA---LEFAE---EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL  229 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~---~~~~~---~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                             +....|+.||++.+.+.   .+++.   ..++.+..+.||.+.++..                    .     
T Consensus       145 -------~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~--------------------~-----  192 (245)
T PRK12367        145 -------ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN--------------------P-----  192 (245)
T ss_pred             -------CCCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC--------------------c-----
Confidence                   11245999999875433   22222   2478888888887644320                    0     


Q ss_pred             CcceeeHHHHHHHHHHhhcCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                       ...+.++|+|+.++.++.+..
T Consensus       193 -~~~~~~~~vA~~i~~~~~~~~  213 (245)
T PRK12367        193 -IGIMSADFVAKQILDQANLGL  213 (245)
T ss_pred             -cCCCCHHHHHHHHHHHHhcCC
Confidence             025789999999999997654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.80  E-value=1.8e-17  Score=135.07  Aligned_cols=205  Identities=13%  Similarity=0.088  Sum_probs=139.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      |+|+||||||+||++++++|+++|  +.|.+..|+..        ..     .  ...++.++++|++|.++++++.+  
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~--------~~-----~--~~~~~~~~~~Dls~~~~~~~~~~~~   65 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHK--------PD-----F--QHDNVQWHALDVTDEAEIKQLSEQF   65 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCc--------cc-----c--ccCceEEEEecCCCHHHHHHHHHhc
Confidence            589999999999999999999985  45655566541        00     1  12478889999999988777654  


Q ss_pred             -CCCEEEEecccCCCC-----------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcc
Q 023244           82 -GCTGVLHVATPVDFE-----------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -~~d~vih~a~~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                       .+|+|||+||.....           ..+.....+++|+.+...+.+.+...   +..++++++||.......      
T Consensus        66 ~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~------  139 (235)
T PRK09009         66 TQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD------  139 (235)
T ss_pred             CCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc------
Confidence             589999999986421           01123467889998888777776542   114689999874321110      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                         ..          .++...|+.+|++.+.+++.++.+     .+++++.+.||.+.++.....        .     .
T Consensus       140 ---~~----------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~--------~-----~  193 (235)
T PRK09009        140 ---NR----------LGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF--------Q-----Q  193 (235)
T ss_pred             ---CC----------CCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch--------h-----h
Confidence               00          022346999999999999988865     378999999999988753210        0     0


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCceEE-Eeccc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYI-CSSHT  262 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~-~~~~~  262 (285)
                      ..+     ...++..+|+|+.+.+++....  ..|.+. +.++.
T Consensus       194 ~~~-----~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~~g~~  232 (235)
T PRK09009        194 NVP-----KGKLFTPEYVAQCLLGIIANATPAQSGSFLAYDGET  232 (235)
T ss_pred             ccc-----cCCCCCHHHHHHHHHHHHHcCChhhCCcEEeeCCcC
Confidence            111     1246899999999999998753  245443 44443

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.80  E-value=1.5e-17  Score=136.88  Aligned_cols=219  Identities=19%  Similarity=0.170  Sum_probs=150.1

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ..+|+++|||++..||+++|++|++.|.+|++.+|+.+    ...+....+........++..+.+|+++.++.+++++ 
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEE----RLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999871    0001111122222224578899999999877666653 


Q ss_pred             -------CCCEEEEecccCCC------CCCChHHHHHHHHHHH-HHHHHHHHHhc---CCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAING-TLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~-~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             ..|++||+||....      ...+.++..+++|+.| ...+..++...   +.-..++++||........   
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~---  158 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGP---  158 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC---
Confidence                   47999999998553      1233346889999995 55555555432   2256899999987543331   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC-ccHHHHHHH-Hh
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA-GSVRSSLAL-IL  219 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~-~~~~~~~~~-~~  219 (285)
                                        .+...|+.+|.+.+.+.+.++.++   |++++++-||.|.++....... .....+... ..
T Consensus       159 ------------------~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~  220 (270)
T KOG0725|consen  159 ------------------GSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDS  220 (270)
T ss_pred             ------------------CCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhcc
Confidence                              111569999999999999988774   8999999999999986211111 111122221 01


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ....+..     .+..++|++..+.+++....
T Consensus       221 ~~~~p~g-----r~g~~~eva~~~~fla~~~a  247 (270)
T KOG0725|consen  221 KGAVPLG-----RVGTPEEVAEAAAFLASDDA  247 (270)
T ss_pred             ccccccC-----CccCHHHHHHhHHhhcCccc
Confidence            1222333     78999999999999997653

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.80  E-value=1.2e-17  Score=144.39  Aligned_cols=188  Identities=13%  Similarity=0.093  Sum_probs=127.6

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+++||||||+||++++++|+++|++|++++|+.        +... ....   ....+..+.+|++|.+++.+.+.
T Consensus       176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~--------~~l~~~~~~---~~~~v~~v~~Dvsd~~~v~~~l~  244 (406)
T PRK07424        176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNS--------DKITLEING---EDLPVKTLHWQVGQEAALAELLE  244 (406)
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhh---cCCCeEEEEeeCCCHHHHHHHhC
Confidence            3568999999999999999999999999999999876        2211 1111   11246778899999999999999


Q ss_pred             CCCEEEEecccCCCCCC--ChHHHHHHHHHHHHHHHHHHHHhc----CC--c-cEEEEeccceeeeccCCCCcccccCCC
Q 023244           82 GCTGVLHVATPVDFEDK--EPEEVITQRAINGTLGILKSCLKS----GT--V-KRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~--~~~~~~~~~n~~~~~~l~~~~~~~----~~--~-~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                      ++|++||+||.......  +..+..+++|+.++.++++++.+.    +.  . ..+|++|+.. . ..            
T Consensus       245 ~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~-~~------------  310 (406)
T PRK07424        245 KVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-V-NP------------  310 (406)
T ss_pred             CCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-c-cC------------
Confidence            99999999987543222  223588999999999999887532    20  1 2345555421 1 10            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS  232 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
                                +....|+.||.+.+.+..-...+.++.+..+.||.+..+.                 .   +      ..
T Consensus       311 ----------~~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~-----------------~---~------~~  354 (406)
T PRK07424        311 ----------AFSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNL-----------------N---P------IG  354 (406)
T ss_pred             ----------CCchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCC-----------------C---c------CC
Confidence                      1124599999999887533222345555555554432210                 0   0      12


Q ss_pred             eeeHHHHHHHHHHhhcCCC
Q 023244          233 MVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~  251 (285)
                      .+.++|+|+.++++++++.
T Consensus       355 ~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        355 VMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             CCCHHHHHHHHHHHHHCCC
Confidence            4789999999999998654

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.79  E-value=8.4e-18  Score=136.02  Aligned_cols=168  Identities=10%  Similarity=0.053  Sum_probs=120.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+..+|+++||||++.||..++++|+++|++|+++.|+.        +.... .++....+.++..+.+|++|+++++++
T Consensus         1 ~~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~--------~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~   72 (227)
T PRK08862          1 MDIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQ--------SALKDTYEQCSALTDNVYSFQLKDFSQESIRHL   72 (227)
T ss_pred             CCCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHH
Confidence            666678999999999999999999999999999999976        22221 111111233577888999999888776


Q ss_pred             hc--------CCCEEEEecccCCC----CCC--ChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccC
Q 023244           80 IA--------GCTGVLHVATPVDF----EDK--EPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        80 ~~--------~~d~vih~a~~~~~----~~~--~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++        .+|++||+||....    .+.  +.....+++|+.+...+++.    +++.+..+.+|++||....    
T Consensus        73 ~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~----  148 (227)
T PRK08862         73 FDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH----  148 (227)
T ss_pred             HHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC----
Confidence            53        47999999975322    111  12234567777776655444    4443324689999985421    


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecC
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP  201 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~  201 (285)
                                           ++...|+.+|...+.+.+.++.+   +|++++.+.||.+-++
T Consensus       149 ---------------------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~  190 (227)
T PRK08862        149 ---------------------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSAN  190 (227)
T ss_pred             ---------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCC
Confidence                                 11245999999999988888776   4899999999999876

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.79  E-value=1.5e-17  Score=140.38  Aligned_cols=221  Identities=18%  Similarity=0.086  Sum_probs=139.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc--cCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+++||||++.||.+++++|++.|++|++++|+......  ...+....+ ..+...+.++.++.+|++|.+++++++
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            35899999999999999999999999999999997411000  001111111 111112335778899999998888776


Q ss_pred             c-------CCCEEEEec-ccC------CC-C--CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeec
Q 023244           81 A-------GCTGVLHVA-TPV------DF-E--DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFY  139 (285)
Q Consensus        81 ~-------~~d~vih~a-~~~------~~-~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~  139 (285)
                      +       .+|++||+| +..      .. .  ..+.....+++|+.+...+.+++.+    .+ -.+||++||......
T Consensus        87 ~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~~~~~~  165 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDGTAEYN  165 (305)
T ss_pred             HHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCcccccc
Confidence            5       379999999 642      11 0  1122246778898888777766543    33 368999999653211


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~  216 (285)
                      ...                   .+....|+.||.+...+.+.++.++   |++++.|.||.+-++.........-.....
T Consensus       166 ~~~-------------------~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~  226 (305)
T PRK08303        166 ATH-------------------YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRD  226 (305)
T ss_pred             CcC-------------------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhh
Confidence            100                   0123469999999999988887764   799999999999776311000000000000


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .. . ..+.    ...+..++|+|.++++++..+
T Consensus       227 ~~-~-~~p~----~~~~~~peevA~~v~fL~s~~  254 (305)
T PRK08303        227 AL-A-KEPH----FAISETPRYVGRAVAALAADP  254 (305)
T ss_pred             hh-c-cccc----cccCCCHHHHHHHHHHHHcCc
Confidence            00 0 0010    113457999999999999765

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.78  E-value=6.3e-18  Score=131.34  Aligned_cols=166  Identities=20%  Similarity=0.217  Sum_probs=121.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      ++++||||+|+||.+++++|+++|. .|+++.|+..    ........+.++...+.++.++.+|+++.+++.++++.  
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   76 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGP----DAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIP   76 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCC----CCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999986 6788888652    11111111122212234678899999999888777653  


Q ss_pred             -----CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           83 -----CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        83 -----~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                           +|.|||+++.....     ..+..+..++.|+.++.++++++++.+ .+++|++||.....+.            
T Consensus        77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~ii~~ss~~~~~~~------------  143 (180)
T smart00822       77 ARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLP-LDFFVLFSSVAGVLGN------------  143 (180)
T ss_pred             HHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCC-cceEEEEccHHHhcCC------------
Confidence                 59999999975431     112235789999999999999997766 7899999998654332            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCcee
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVV  199 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~  199 (285)
                                +....|+.+|...+.+++.+. ..+++++.+.||.+-
T Consensus       144 ----------~~~~~y~~sk~~~~~~~~~~~-~~~~~~~~~~~g~~~  179 (180)
T smart00822      144 ----------PGQANYAAANAFLDALAAHRR-ARGLPATSINWGAWA  179 (180)
T ss_pred             ----------CCchhhHHHHHHHHHHHHHHH-hcCCceEEEeecccc
Confidence                      123569999999999996655 569999999998764

It uses NADPH to reduce the keto group to a hydroxy group.

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=1.1e-16  Score=133.35  Aligned_cols=217  Identities=24%  Similarity=0.216  Sum_probs=157.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+||||||||++|++++++|+++|++|.++.|++        +....+.      ..+.+..+|+.++..+...+++.|.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~--------~~~~~~~------~~v~~~~~d~~~~~~l~~a~~G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNP--------EAAAALA------GGVEVVLGDLRDPKSLVAGAKGVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCH--------HHHHhhc------CCcEEEEeccCCHhHHHHHhccccE
Confidence            4799999999999999999999999999999998        4444333      3889999999999999999999999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      ++++.+... ... +   ..........+..+.+. .+ +++++++|...+..                        ...
T Consensus        67 ~~~i~~~~~-~~~-~---~~~~~~~~~~~~a~~a~-~~-~~~~~~~s~~~~~~------------------------~~~  115 (275)
T COG0702          67 VLLISGLLD-GSD-A---FRAVQVTAVVRAAEAAG-AG-VKHGVSLSVLGADA------------------------ASP  115 (275)
T ss_pred             EEEEecccc-ccc-c---hhHHHHHHHHHHHHHhc-CC-ceEEEEeccCCCCC------------------------CCc
Confidence            999988665 322 1   12222333344444444 33 68899988765421                        112


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC-ccccccccCcceeeHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN-REEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      ..|..+|..+|.++.+    .|++++++|+..+|......    .   ........ +.........+++..+|++..+.
T Consensus       116 ~~~~~~~~~~e~~l~~----sg~~~t~lr~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~  184 (275)
T COG0702         116 SALARAKAAVEAALRS----SGIPYTTLRRAAFYLGAGAA----F---IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALA  184 (275)
T ss_pred             cHHHHHHHHHHHHHHh----cCCCeEEEecCeeeeccchh----H---HHHHHhhCCceecCCCCceeeeEHHHHHHHHH
Confidence            5699999999999864    58999999977776643211    1   11112222 22222244678999999999999


Q ss_pred             HhhcCCCCC-ceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          245 FLLEYPDAK-GRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       245 ~~~~~~~~~-~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ..+..+... ..|.+.+ +..+..++...+....++
T Consensus       185 ~~l~~~~~~~~~~~l~g~~~~~~~~~~~~l~~~~gr  220 (275)
T COG0702         185 AALDAPATAGRTYELAGPEALTLAELASGLDYTIGR  220 (275)
T ss_pred             HHhcCCcccCcEEEccCCceecHHHHHHHHHHHhCC
Confidence            999877544 4577655 689999999999998876

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=99.77  E-value=2.4e-17  Score=123.79  Aligned_cols=204  Identities=18%  Similarity=0.210  Sum_probs=144.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      .|..+||||+..||+++++.|++.|++|.+.+++.     .  ........++.. ..-..+.+|+++.++++.+++   
T Consensus        14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~-----~--~A~ata~~L~g~-~~h~aF~~DVS~a~~v~~~l~e~~   85 (256)
T KOG1200|consen   14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDS-----A--AAEATAGDLGGY-GDHSAFSCDVSKAHDVQNTLEEME   85 (256)
T ss_pred             cceeEEecCCchHHHHHHHHHHhcCcEEEEeecch-----h--hHHHHHhhcCCC-CccceeeeccCcHHHHHHHHHHHH
Confidence            47899999999999999999999999999999987     1  222223333322 244567899999988777665   


Q ss_pred             ----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc-----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                          .+++++||||+...      ..++| ++.+.+|+.|+..+.+++.+.     +..-++|++||+-.--+.      
T Consensus        86 k~~g~psvlVncAGItrD~~Llrmkq~qw-d~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN------  158 (256)
T KOG1200|consen   86 KSLGTPSVLVNCAGITRDGLLLRMKQEQW-DSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGN------  158 (256)
T ss_pred             HhcCCCcEEEEcCccccccceeeccHHHH-HHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhccccc------
Confidence                37999999999765      34455 589999999988887776543     223489999998543232      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHH----HHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKT----LTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~----~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      -....|+++|.    ....+.++++ +.+|+++.+-||.|-.|....-.+..+    ..+.+. 
T Consensus       159 ----------------~GQtnYAAsK~GvIgftktaArEla-~knIrvN~VlPGFI~tpMT~~mp~~v~----~ki~~~-  216 (256)
T KOG1200|consen  159 ----------------FGQTNYAASKGGVIGFTKTAARELA-RKNIRVNVVLPGFIATPMTEAMPPKVL----DKILGM-  216 (256)
T ss_pred             ----------------ccchhhhhhcCceeeeeHHHHHHHh-hcCceEeEeccccccChhhhhcCHHHH----HHHHcc-
Confidence                            23355998885    4555666666 358999999999999986433222222    222222 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .+..     .+-..+|+|..++++....
T Consensus       217 iPmg-----r~G~~EevA~~V~fLAS~~  239 (256)
T KOG1200|consen  217 IPMG-----RLGEAEEVANLVLFLASDA  239 (256)
T ss_pred             CCcc-----ccCCHHHHHHHHHHHhccc
Confidence            2222     6889999999999999543

>PLN00015 protochlorophyllide reductase

Probab=99.77  E-value=5.9e-17  Score=137.23  Aligned_cols=232  Identities=15%  Similarity=0.117  Sum_probs=140.5

Q ss_pred             EEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-----
Q 023244            9 CVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-----   81 (285)
Q Consensus         9 lVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   81 (285)
                      +|||||+.||.+++++|+++| ++|++++|+.        +... ...++.....++.++.+|++|.++++++++     
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   72 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDF--------LKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRS   72 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhc
Confidence            699999999999999999999 9999999876        2222 222222223468888999999998877764     


Q ss_pred             --CCCEEEEecccCCC--C----CCChHHHHHHHHHHHHHHHHHHHHh----cCC-ccEEEEeccceeeeccC-CCCcc-
Q 023244           82 --GCTGVLHVATPVDF--E----DKEPEEVITQRAINGTLGILKSCLK----SGT-VKRVVYTSSNAAVFYND-KDVDM-  146 (285)
Q Consensus        82 --~~d~vih~a~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~-~~~~v~~SS~~~~~~~~-~~~~~-  146 (285)
                        .+|++||+||....  .    ..+..+..+++|+.++..+.+++.+    .+. .+++|++||........ ....+ 
T Consensus        73 ~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~  152 (308)
T PLN00015         73 GRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPK  152 (308)
T ss_pred             CCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCc
Confidence              37999999997432  1    1223458899999997777666433    221 36999999986532100 00000 


Q ss_pred             --cc------c--CCCCchhhh-hhcCCCCchhHhhHHHHHHHHHHHHHH----cCCcEEEeccCceec-CCCCCCCCcc
Q 023244          147 --MD------E--TFWSDVDYI-RKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVG-PFICPKFAGS  210 (285)
Q Consensus       147 --~~------e--~~~~~~~~~-~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~v~g-~~~~~~~~~~  210 (285)
                        +.      +  .+....... .....+...|+.||.+.+...+.++++    .|++++++.||.|.. +...... ..
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~-~~  231 (308)
T PLN00015        153 ANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHI-PL  231 (308)
T ss_pred             cchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccccc-HH
Confidence              00      0  000000000 000123457999999977777777765    379999999999953 3322111 11


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceE
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY  256 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~  256 (285)
                      .......+.  ....     ..+..+++.|..+++++....  ..|.|
T Consensus       232 ~~~~~~~~~--~~~~-----~~~~~pe~~a~~~~~l~~~~~~~~~G~~  272 (308)
T PLN00015        232 FRLLFPPFQ--KYIT-----KGYVSEEEAGKRLAQVVSDPSLTKSGVY  272 (308)
T ss_pred             HHHHHHHHH--HHHh-----cccccHHHhhhhhhhhccccccCCCccc
Confidence            110000000  0001     135789999999999887543  34555

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.76  E-value=6.3e-18  Score=130.33  Aligned_cols=152  Identities=24%  Similarity=0.234  Sum_probs=117.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+++||||+|.||..++++|+++| +.|+++.|+.     ..........++.....++.++.+|+++.++++++++   
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~-----~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   75 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSE-----DSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVI   75 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSC-----HHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecc-----cccccccccccccccccccccccccccccccccccccccc
Confidence            689999999999999999999995 5778888871     0112222222222234689999999999998888775   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                          ..|++||+||.....     ..+..+..+++|+.+...+.+++..++ .+++|++||.....+.            
T Consensus        76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~------------  142 (167)
T PF00106_consen   76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQG-GGKIVNISSIAGVRGS------------  142 (167)
T ss_dssp             HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHT-TEEEEEEEEGGGTSSS------------
T ss_pred             cccccccccccccccccccccccccchhhhhccccccceeeeeeehheecc-ccceEEecchhhccCC------------
Confidence                369999999987741     123346889999999999999998855 7899999998765433            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEE  185 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  185 (285)
                                +....|+.+|.+.+.+++.++++
T Consensus       143 ----------~~~~~Y~askaal~~~~~~la~e  165 (167)
T PF00106_consen  143 ----------PGMSAYSASKAALRGLTQSLAAE  165 (167)
T ss_dssp             ----------TTBHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----------CCChhHHHHHHHHHHHHHHHHHh
Confidence                      34568999999999999998876

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.75  E-value=3.5e-16  Score=131.09  Aligned_cols=215  Identities=11%  Similarity=-0.000  Sum_probs=137.8

Q ss_pred             CCCCCCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh--------cCCCC--CCCEEEEec
Q 023244            1 MEEGKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK--------NLPGA--SERLRIFHA   68 (285)
Q Consensus         1 M~~~~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~   68 (285)
                      |..++|+++||||  |..||.++++.|++.|.+|++ .|+.+    ..+.....+.        .....  ......+.+
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~----~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVP----ALNIFETSLRRGKFDESRKLPDGSLMEITKVYPL   79 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcc----hhhHHHHhhhccccchhhhcccccccCcCeeeec
Confidence            3446899999999  899999999999999999988 65431    0000000000        01100  112456788


Q ss_pred             CC--CChh------------------hHHHHhc-------CCCEEEEecccCC----C---CCCChHHHHHHHHHHHHHH
Q 023244           69 DL--SHPD------------------GFDAAIA-------GCTGVLHVATPVD----F---EDKEPEEVITQRAINGTLG  114 (285)
Q Consensus        69 Dl--~d~~------------------~~~~~~~-------~~d~vih~a~~~~----~---~~~~~~~~~~~~n~~~~~~  114 (285)
                      |+  ++.+                  +++++++       .+|++|||||...    .   ...+.+...+++|+.+...
T Consensus        80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~  159 (303)
T PLN02730         80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS  159 (303)
T ss_pred             ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence            88  3333                  5555554       3799999996422    1   1122345889999999988


Q ss_pred             HHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC-chhHhhHHHHHHHHHHHHHHc----CC
Q 023244          115 ILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG-KSYAISKTLTERAALEFAEEH----GL  188 (285)
Q Consensus       115 l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~~----~i  188 (285)
                      +.+++.+. ..-.++|++||..+....                      +.. ..|+.||.+.+.+.+.++.+.    |+
T Consensus       160 l~~~~~p~m~~~G~II~isS~a~~~~~----------------------p~~~~~Y~asKaAl~~l~~~la~El~~~~gI  217 (303)
T PLN02730        160 LLQHFGPIMNPGGASISLTYIASERII----------------------PGYGGGMSSAKAALESDTRVLAFEAGRKYKI  217 (303)
T ss_pred             HHHHHHHHHhcCCEEEEEechhhcCCC----------------------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCe
Confidence            88876553 112699999997653222                      112 369999999999999888763    69


Q ss_pred             cEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          189 DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       189 ~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +++.|.||.+.++.... .... ........ ...++     ..+..++|++.++++++...
T Consensus       218 rVn~V~PG~v~T~~~~~-~~~~-~~~~~~~~-~~~pl-----~r~~~peevA~~~~fLaS~~  271 (303)
T PLN02730        218 RVNTISAGPLGSRAAKA-IGFI-DDMIEYSY-ANAPL-----QKELTADEVGNAAAFLASPL  271 (303)
T ss_pred             EEEEEeeCCccCchhhc-cccc-HHHHHHHH-hcCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence            99999999998875322 1111 11111111 11111     14678999999999999754

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.73  E-value=3.4e-16  Score=130.88  Aligned_cols=222  Identities=18%  Similarity=0.084  Sum_probs=150.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+++++|||||+.||.+++++|+.+|.+|+...|+..    ...+....+.. .....++.++++|+++.+++.+..+  
T Consensus        34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~----~~~~~~~~i~~-~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEE----RGEEAKEQIQK-GKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHH----HHHHHHHHHHh-cCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            4579999999999999999999999999999999861    11122222222 2345688899999999988887765  


Q ss_pred             -----CCCEEEEecccCCCC---CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 -----GCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                           ..|++||+||++...   ..+..+..+.+|..|...|.+.+    ++.. ..|+|++||... ...........|
T Consensus       109 ~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~-~~~~~~~~l~~~  186 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILG-GGKIDLKDLSGE  186 (314)
T ss_pred             HhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccc-cCccchhhccch
Confidence                 359999999987752   33455789999998877766554    4444 379999999874 111111111222


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      ....        -.....|+.||.+......++++..  |+.+..+.||.+.++.... .......+...+...      
T Consensus       187 ~~~~--------~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r-~~~~~~~l~~~l~~~------  251 (314)
T KOG1208|consen  187 KAKL--------YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR-VNLLLRLLAKKLSWP------  251 (314)
T ss_pred             hccC--------ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec-chHHHHHHHHHHHHH------
Confidence            2100        0111249999999998888888775  6999999999999875433 222222222222111      


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                          -+-..+.-|+...+++.+++
T Consensus       252 ----~~ks~~~ga~t~~~~a~~p~  271 (314)
T KOG1208|consen  252 ----LTKSPEQGAATTCYAALSPE  271 (314)
T ss_pred             ----hccCHHHHhhheehhccCcc
Confidence                11356777888888888874

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.72  E-value=1.7e-16  Score=122.39  Aligned_cols=218  Identities=20%  Similarity=0.131  Sum_probs=150.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC--CCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+-.+|++++||+.|.||..++++|+.+|..+.++..+.        +..+....+.  .+..++.|+++|+++..+++.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~--------En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~   72 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSE--------ENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEA   72 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhh--------hCHHHHHHHhccCCCceEEEEEeccccHHHHHH
Confidence            556789999999999999999999999999999888877        2233333332  235688999999999988888


Q ss_pred             HhcC-------CCEEEEecccCCCCCCChHHHHHHHHHHH----HHHHHHHHHhc--CCccEEEEeccceeeeccCCCCc
Q 023244           79 AIAG-------CTGVLHVATPVDFEDKEPEEVITQRAING----TLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        79 ~~~~-------~d~vih~a~~~~~~~~~~~~~~~~~n~~~----~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +++.       +|++||.||+.+.  .++ +.++.+|+.|    |...++++.+.  |+.+-+|.+||.....+.     
T Consensus        73 ~f~ki~~~fg~iDIlINgAGi~~d--kd~-e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~-----  144 (261)
T KOG4169|consen   73 AFDKILATFGTIDILINGAGILDD--KDW-ERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPM-----  144 (261)
T ss_pred             HHHHHHHHhCceEEEEcccccccc--hhH-HHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCcc-----
Confidence            8763       6999999999875  355 5888888764    56677887665  356789999997654332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHH-----HHHHcCCcEEEeccCceecCCCC-----CCCCccHHHHH
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE-----FAEEHGLDLVTLIPSMVVGPFIC-----PKFAGSVRSSL  215 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~-----~~~~~~i~~~i~Rp~~v~g~~~~-----~~~~~~~~~~~  215 (285)
                                       +-...|++||+-.=...++     +-++.|+++..+.||.+-..-..     ......-..+.
T Consensus       145 -----------------p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~  207 (261)
T KOG4169|consen  145 -----------------PVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIK  207 (261)
T ss_pred             -----------------ccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHH
Confidence                             2235699999743322222     22356999999999998543111     11111111222


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  261 (285)
                      ..+...          .-....+++..++.+++.+..+.+|.++..
T Consensus       208 ~~l~~~----------~~q~~~~~a~~~v~aiE~~~NGaiw~v~~g  243 (261)
T KOG4169|consen  208 EALERA----------PKQSPACCAINIVNAIEYPKNGAIWKVDSG  243 (261)
T ss_pred             HHHHHc----------ccCCHHHHHHHHHHHHhhccCCcEEEEecC
Confidence            222222          234667999999999999766667876543

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.71  E-value=1.3e-17  Score=123.00  Aligned_cols=207  Identities=18%  Similarity=0.162  Sum_probs=150.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .++.|++||+.-.||+.++..|++.|..|+++.|++        .....+. +-+   ..+.++.+|+.+-+.+.+++-.
T Consensus         6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~--------a~L~sLV~e~p---~~I~Pi~~Dls~wea~~~~l~~   74 (245)
T KOG1207|consen    6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE--------ANLLSLVKETP---SLIIPIVGDLSAWEALFKLLVP   74 (245)
T ss_pred             cceEEEeecccccccHHHHHHHHhcCCEEEEEecCH--------HHHHHHHhhCC---cceeeeEecccHHHHHHHhhcc
Confidence            468999999999999999999999999999999988        3333322 222   2489999999998888887754


Q ss_pred             ---CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           83 ---CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        83 ---~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                         +|.++|+||..-.     -.++..+..|++|+++..++.+...    .++..+.+|.+||.+....-          
T Consensus        75 v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~----------  144 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPL----------  144 (245)
T ss_pred             cCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhccccc----------
Confidence               5999999987443     1223345778899998888777743    33334579999998864322          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC---CcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG---LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~---i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  ...+.|..+|.+.+.+.+.++.+.|   |++..+.|..|+...-..++...-+  ... .-...++. 
T Consensus       145 ------------~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K--~k~-mL~riPl~-  208 (245)
T KOG1207|consen  145 ------------DNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDK--KKK-MLDRIPLK-  208 (245)
T ss_pred             ------------CCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchh--ccc-hhhhCchh-
Confidence                        2346799999999999999988864   9999999999987643332221111  011 11112333 


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                          .|..++++++++.+++.+..
T Consensus       209 ----rFaEV~eVVnA~lfLLSd~s  228 (245)
T KOG1207|consen  209 ----RFAEVDEVVNAVLFLLSDNS  228 (245)
T ss_pred             ----hhhHHHHHHhhheeeeecCc
Confidence                79999999999999998664

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=99.68  E-value=3.3e-16  Score=128.12  Aligned_cols=210  Identities=20%  Similarity=0.183  Sum_probs=141.3

Q ss_pred             cCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-------
Q 023244           12 GGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-------   81 (285)
Q Consensus        12 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   81 (285)
                      |++  +.||+.++++|+++|++|++++|+..    ...+....+. +.     ...++.+|++|.++++++++       
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~----~~~~~~~~l~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~~~~   71 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEE----KLADALEELAKEY-----GAEVIQCDLSDEESVEALFDEAVERFG   71 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHH----HHHHHHHHHHHHT-----TSEEEESCTTSHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChH----HHHHHHHHHHHHc-----CCceEeecCcchHHHHHHHHHHHhhcC
Confidence            666  99999999999999999999999871    0001122222 22     23369999999998888754       


Q ss_pred             -CCCEEEEecccCCC----C-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 -GCTGVLHVATPVDF----E-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 -~~d~vih~a~~~~~----~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                       .+|++||+++....    .     ..+.+...+++|+.+...+++++.+. .+-+++|++||.......          
T Consensus        72 g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~----------  141 (241)
T PF13561_consen   72 GRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM----------  141 (241)
T ss_dssp             SSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS----------
T ss_pred             CCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC----------
Confidence             46999999987553    1     11233578889999988888887543 113689999988643222          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                  +....|+.+|.+.+.+++.++.+    +||++++|.||.+.++.... ... ...+..... ...++.
T Consensus       142 ------------~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~-~~~-~~~~~~~~~-~~~pl~  206 (241)
T PF13561_consen  142 ------------PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTER-IPG-NEEFLEELK-KRIPLG  206 (241)
T ss_dssp             ------------TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHH-HHT-HHHHHHHHH-HHSTTS
T ss_pred             ------------ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhc-ccc-ccchhhhhh-hhhccC
Confidence                        23457999999999888887765    47999999999998763111 000 111111111 112332


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCceEE-Eec
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKGRYI-CSS  260 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~-~~~  260 (285)
                           .+..++|+|.++.+++....  -.|..+ +.+
T Consensus       207 -----r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  207 -----RLGTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             -----SHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             -----CCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence                 67899999999999998653  346544 443

...

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.67  E-value=5.7e-15  Score=113.97  Aligned_cols=206  Identities=15%  Similarity=0.135  Sum_probs=139.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEe-cCCCCccccCccc-hhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTV-RSELDPEHRNSKD-LSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+.|+||||+..||-.|+++|++. |.++++-. |++        ++ ...+......++++++++.|+++.+++..+++
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~--------e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~   74 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDP--------EKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQ   74 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCCh--------HHhhHHHHHhhccCCceEEEEEecccHHHHHHHHH
Confidence            567999999999999999999975 66665554 445        33 33333332346799999999999887777765


Q ss_pred             ---------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcC----------CccEEEEec
Q 023244           82 ---------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSG----------TVKRVVYTS  132 (285)
Q Consensus        82 ---------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~----------~~~~~v~~S  132 (285)
                               +.+++|++||....      ..+..+-..+++|..+...+.+++    ++..          ....+|++|
T Consensus        75 ~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinis  154 (249)
T KOG1611|consen   75 EVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINIS  154 (249)
T ss_pred             HHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEee
Confidence                     35999999998553      122223588999988776665543    3222          022799999


Q ss_pred             cceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc
Q 023244          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG  209 (285)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~  209 (285)
                      |.+.--+..                   ...+...|..||.+.-...+.++-+.   ++-++.+.||+|-+..-.     
T Consensus       155 S~~~s~~~~-------------------~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg-----  210 (249)
T KOG1611|consen  155 SSAGSIGGF-------------------RPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGG-----  210 (249)
T ss_pred             ccccccCCC-------------------CCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCC-----
Confidence            987531110                   01345679999999998888877553   688889999999875311     


Q ss_pred             cHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC--CC-CceEEEeccc
Q 023244          210 SVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP--DA-KGRYICSSHT  262 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~--~~-~~~~~~~~~~  262 (285)
                                 ..         ..+.+++.+..++..+.+-  .. ++.|+-.+..
T Consensus       211 -----------~~---------a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~  246 (249)
T KOG1611|consen  211 -----------KK---------AALTVEESTSKLLASINKLKNEHNGGFFNRDGTP  246 (249)
T ss_pred             -----------CC---------cccchhhhHHHHHHHHHhcCcccCcceEccCCCc
Confidence                       11         4577888888888777642  23 3455654433

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.67  E-value=3.1e-15  Score=122.30  Aligned_cols=199  Identities=17%  Similarity=0.125  Sum_probs=131.1

Q ss_pred             HHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc----CCCEEEEecccCCCC
Q 023244           21 LIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA----GCTGVLHVATPVDFE   96 (285)
Q Consensus        21 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~vih~a~~~~~~   96 (285)
                      ++++|+++|++|++++|+..        ...          ...++.+|++|.+++.++++    ++|+|||+||.... 
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~--------~~~----------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~-   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREP--------GMT----------LDGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPGT-   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcc--------hhh----------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCC-
Confidence            47889999999999999871        111          12457899999999988886    48999999997533 


Q ss_pred             CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccC----CCCch--hhh-hhcCCCCchh
Q 023244           97 DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET----FWSDV--DYI-RKLDSWGKSY  168 (285)
Q Consensus        97 ~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~----~~~~~--~~~-~~~~~~~~~Y  168 (285)
                       .. .+..+++|+.++..+++++.+. ...++||++||..++....  ..+..+.    .....  ... ..+.++..+|
T Consensus        62 -~~-~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 -AP-VELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQ--RLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             -CC-HHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhcccc--chHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence             23 4589999999999999998764 1136999999998764221  1111111    00000  000 0112345789


Q ss_pred             HhhHHHHHHHHHHHH-HH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          169 AISKTLTERAALEFA-EE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       169 ~~sK~~~E~~~~~~~-~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      +.||.+.+.+.+.++ .+   .|+++++++||.+.++............   .......+     ...+..++|+|++++
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~pe~va~~~~  209 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQE---RVDSDAKR-----MGRPATADEQAAVLV  209 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhH---hhhhcccc-----cCCCCCHHHHHHHHH
Confidence            999999999988887 43   4899999999999988532211000000   00001111     124678999999999


Q ss_pred             HhhcCC
Q 023244          245 FLLEYP  250 (285)
Q Consensus       245 ~~~~~~  250 (285)
                      +++...
T Consensus       210 ~l~s~~  215 (241)
T PRK12428        210 FLCSDA  215 (241)
T ss_pred             HHcChh
Confidence            998643

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.66  E-value=6.4e-15  Score=119.48  Aligned_cols=165  Identities=22%  Similarity=0.241  Sum_probs=123.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ..|-|+|||+-...|..||++|.++|+.|++-...+        +..+.+..... +++..-++.|++++++++++.+  
T Consensus        28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~--------~gae~L~~~~~-s~rl~t~~LDVT~~esi~~a~~~V   98 (322)
T KOG1610|consen   28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTE--------EGAESLRGETK-SPRLRTLQLDVTKPESVKEAAQWV   98 (322)
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecC--------chHHHHhhhhc-CCcceeEeeccCCHHHHHHHHHHH
Confidence            467899999999999999999999999999988665        33333322211 4577888999999999888865  


Q ss_pred             -------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             +.-.||||||+....      ..+.....+++|+.|+..+..+    .++..  +|+|++||..+-..     
T Consensus        99 ~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar--GRvVnvsS~~GR~~-----  171 (322)
T KOG1610|consen   99 KKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR--GRVVNVSSVLGRVA-----  171 (322)
T ss_pred             HHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc--CeEEEecccccCcc-----
Confidence                   236899999975441      2233457889999887665555    45555  79999999874211     


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP  201 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~  201 (285)
                                       .+...+|..||++.|.....+.++   +|+++.++-||.+-.+
T Consensus       172 -----------------~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~  214 (322)
T KOG1610|consen  172 -----------------LPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN  214 (322)
T ss_pred             -----------------CcccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence                             134567999999999888777666   5999999999955443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.66  E-value=2.4e-15  Score=117.30  Aligned_cols=164  Identities=18%  Similarity=0.237  Sum_probs=117.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC---
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG---   82 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   82 (285)
                      +++||||+|.||..+++.|++++. +++++.|+..    ...+....+.++...+.++.++.+|++|++++.++++.   
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~----~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~   77 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGA----PSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQ   77 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGG----GSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHT
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCC----ccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHh
Confidence            689999999999999999999974 7999999830    22233334444433456899999999999999999864   


Q ss_pred             ----CCEEEEecccCCC---C--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           83 ----CTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        83 ----~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                          ++.|||+|+....   .  ..+.....+...+.++.+|.++..... ++.||.+||.+...+.             
T Consensus        78 ~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~-l~~~i~~SSis~~~G~-------------  143 (181)
T PF08659_consen   78 RFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRP-LDFFILFSSISSLLGG-------------  143 (181)
T ss_dssp             TSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEHHHHTT--------------
T ss_pred             ccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCC-CCeEEEECChhHhccC-------------
Confidence                4889999998654   1  122235667788999999999998876 8999999999876554             


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCce
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMV  198 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v  198 (285)
                               +....|+.+....+.+..... ..|.++..|..+..
T Consensus       144 ---------~gq~~YaaAN~~lda~a~~~~-~~g~~~~sI~wg~W  178 (181)
T PF08659_consen  144 ---------PGQSAYAAANAFLDALARQRR-SRGLPAVSINWGAW  178 (181)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHHHH-HTTSEEEEEEE-EB
T ss_pred             ---------cchHhHHHHHHHHHHHHHHHH-hCCCCEEEEEcccc
Confidence                     344679999999998887655 46899888876654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.66  E-value=5.3e-15  Score=112.32  Aligned_cols=168  Identities=17%  Similarity=0.193  Sum_probs=123.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+.+||||||+..||..|+++|.+.|.+|++.+|+.        ++....+.   ..+.+.-..+|+.|.++.++++
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e--------~~L~e~~~---~~p~~~t~v~Dv~d~~~~~~lv   69 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNE--------ERLAEAKA---ENPEIHTEVCDVADRDSRRELV   69 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH--------HHHHHHHh---cCcchheeeecccchhhHHHHH
Confidence            666778999999999999999999999999999999987        34333322   2347778889999998777776


Q ss_pred             c-------CCCEEEEecccCCC---C-CC---ChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF---E-DK---EPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~---~-~~---~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       +.+++|||||+...   . .+   +..+.-..+|+.++..|..+.-.+   .+-..+|.+||.-++.+.   
T Consensus        70 ewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm---  146 (245)
T COG3967          70 EWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPM---  146 (245)
T ss_pred             HHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcc---
Confidence            5       35999999998554   1 11   111355778999888877765433   125689999998765333   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecC
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGP  201 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~  201 (285)
                                         .....|..+|++...+...+...   .+++++=+-|+.|-.+
T Consensus       147 -------------------~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         147 -------------------ASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             -------------------cccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence                               11235999999888766655433   4799999999999875

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.66  E-value=1.2e-14  Score=121.77  Aligned_cols=217  Identities=7%  Similarity=-0.052  Sum_probs=128.5

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccc---cCccchhhhh--------------cCCCCCCCEE
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEH---RNSKDLSFLK--------------NLPGASERLR   64 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~--------------~~~~~~~~~~   64 (285)
                      .+|+++||||+  ..||++++++|+++|++|++.++.+.-...   ....+.....              .....-....
T Consensus         7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~   86 (299)
T PRK06300          7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE   86 (299)
T ss_pred             CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence            57899999995  999999999999999999987643100000   0000000000              0000000111


Q ss_pred             EEecCCCC--------hhhHHHHhc-------CCCEEEEecccCC----C---CCCChHHHHHHHHHHHHHHHHHHHHhc
Q 023244           65 IFHADLSH--------PDGFDAAIA-------GCTGVLHVATPVD----F---EDKEPEEVITQRAINGTLGILKSCLKS  122 (285)
Q Consensus        65 ~~~~Dl~d--------~~~~~~~~~-------~~d~vih~a~~~~----~---~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (285)
                      -+..|+++        .++++++++       .+|++||+||...    .   ...+.++..+++|+.+..++.+++.+.
T Consensus        87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~  166 (299)
T PRK06300         87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI  166 (299)
T ss_pred             EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            12222222        112444433       4799999997532    1   111223588899999999988887653


Q ss_pred             -CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCc-hhHhhHHHHHHHHHHHHHHc----CCcEEEeccC
Q 023244          123 -GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK-SYAISKTLTERAALEFAEEH----GLDLVTLIPS  196 (285)
Q Consensus       123 -~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~----~i~~~i~Rp~  196 (285)
                       ..-+++|++||.......                      +... .|+.||...+.+.+.++.+.    |++++.|.||
T Consensus       167 m~~~G~ii~iss~~~~~~~----------------------p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG  224 (299)
T PRK06300        167 MNPGGSTISLTYLASMRAV----------------------PGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAG  224 (299)
T ss_pred             hhcCCeEEEEeehhhcCcC----------------------CCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeC
Confidence             112579999987653222                      1122 69999999999998888763    7999999999


Q ss_pred             ceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          197 MVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       197 ~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .+.++.... .... ......... ..+.     ..+..++|++.++.+++...
T Consensus       225 ~v~T~~~~~-~~~~-~~~~~~~~~-~~p~-----~r~~~peevA~~v~~L~s~~  270 (299)
T PRK06300        225 PLASRAGKA-IGFI-ERMVDYYQD-WAPL-----PEPMEAEQVGAAAAFLVSPL  270 (299)
T ss_pred             CccChhhhc-cccc-HHHHHHHHh-cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence            998774221 1000 011111111 1111     14678999999999998753

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.65  E-value=4.3e-15  Score=122.22  Aligned_cols=173  Identities=20%  Similarity=0.197  Sum_probs=124.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCC-CCEEEEecCCCC-hhhHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGAS-ERLRIFHADLSH-PDGFD   77 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~Dl~d-~~~~~   77 (285)
                      |..++|+|+||||++.||..+++.|+++|+.|+++.|...     .. ....+.. ..... ..+.+...|+++ .++++
T Consensus         1 ~~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~   74 (251)
T COG1028           1 MDLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSE-----EE-AAEALAAAIKEAGGGRAAAVAADVSDDEESVE   74 (251)
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCc-----hh-hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHH
Confidence            4456789999999999999999999999999998888761     00 1111111 11111 367778899998 87776


Q ss_pred             HHhc-------CCCEEEEecccCC----C--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCC
Q 023244           78 AAIA-------GCTGVLHVATPVD----F--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~----~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      .+++       .+|++||+||...    .  ...+..+..+++|+.+...+.+.+...-..+++|++||.... ..    
T Consensus        75 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~----  149 (251)
T COG1028          75 ALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GG----  149 (251)
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CC----
Confidence            6654       3799999999853    2  122344688999999988888855443211299999998765 33    


Q ss_pred             cccccCCCCchhhhhhcCCC-CchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCC
Q 023244          145 DMMDETFWSDVDYIRKLDSW-GKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPF  202 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~-~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~  202 (285)
                                        ++ ...|+.||++.+.+.+.++.+   .|++++.+.||.+..+.
T Consensus       150 ------------------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~  193 (251)
T COG1028         150 ------------------PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPM  193 (251)
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcc
Confidence                              12 256999999999888888755   58999999999766553

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.63  E-value=1.3e-14  Score=117.44  Aligned_cols=206  Identities=19%  Similarity=0.164  Sum_probs=146.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC---CCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG---ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+|||++..+|..++.++..+|++|+++.|+.        ++...+...-+   ....+.+..+|+.|.+++...+++
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~--------~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~  105 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSG--------KKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEE  105 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccH--------HHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhh
Confidence            5899999999999999999999999999999987        44433332211   223367888999999888777753


Q ss_pred             -------CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           83 -------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 -------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             +|.+|||||..-.     ......+..+++|..++.|+++++...    ....+|+.+||..+..+-      
T Consensus       106 l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i------  179 (331)
T KOG1210|consen  106 LRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGI------  179 (331)
T ss_pred             hhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCc------
Confidence                   6999999987443     122334688999999999998887543    224489999998764333      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      .+.+.|+.+|.+...+...+.++   +++.++..-|+.+..|+...- +..-+.....+     
T Consensus       180 ----------------~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~E-n~tkP~~t~ii-----  237 (331)
T KOG1210|consen  180 ----------------YGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERE-NKTKPEETKII-----  237 (331)
T ss_pred             ----------------ccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccc-cccCchheeee-----
Confidence                            34567999998777777666655   589999999999998864321 00000001111     


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                          .+.-+.+..+++|.+++.=+.+.+
T Consensus       238 ----~g~ss~~~~e~~a~~~~~~~~rg~  261 (331)
T KOG1210|consen  238 ----EGGSSVIKCEEMAKAIVKGMKRGN  261 (331)
T ss_pred             ----cCCCCCcCHHHHHHHHHhHHhhcC
Confidence                333466899999999888776553

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=99.60  E-value=1.7e-14  Score=106.82  Aligned_cols=163  Identities=18%  Similarity=0.126  Sum_probs=122.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|..+|.||||-.|+.|++++++.+  .+|+++.|+.+              --+....++.....|....+++.+.++
T Consensus        17 q~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~--------------~d~at~k~v~q~~vDf~Kl~~~a~~~q   82 (238)
T KOG4039|consen   17 QNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRREL--------------PDPATDKVVAQVEVDFSKLSQLATNEQ   82 (238)
T ss_pred             hccceEEEeccccccHHHHHHHHhcccceeEEEEEeccC--------------CCccccceeeeEEechHHHHHHHhhhc
Confidence            46899999999999999999999887  48999999741              112224467778899999999999899


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+.+.+-|.......  .+.++++.-.-...+++++++.| +++|+.+||..+..                       
T Consensus        83 g~dV~FcaLgTTRgkaG--adgfykvDhDyvl~~A~~AKe~G-ck~fvLvSS~GAd~-----------------------  136 (238)
T KOG4039|consen   83 GPDVLFCALGTTRGKAG--ADGFYKVDHDYVLQLAQAAKEKG-CKTFVLVSSAGADP-----------------------  136 (238)
T ss_pred             CCceEEEeecccccccc--cCceEeechHHHHHHHHHHHhCC-CeEEEEEeccCCCc-----------------------
Confidence            99999999887665211  12444444555667889999999 99999999987521                       


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCcc
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGS  210 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~  210 (285)
                       ..+..|-..|...|.-+.++-   --+++|+|||.+.|.........+
T Consensus       137 -sSrFlY~k~KGEvE~~v~eL~---F~~~~i~RPG~ll~~R~esr~gef  181 (238)
T KOG4039|consen  137 -SSRFLYMKMKGEVERDVIELD---FKHIIILRPGPLLGERTESRQGEF  181 (238)
T ss_pred             -ccceeeeeccchhhhhhhhcc---ccEEEEecCcceecccccccccch
Confidence             123569999999998775532   347899999999997655544333

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.60  E-value=2.4e-14  Score=146.27  Aligned_cols=176  Identities=19%  Similarity=0.195  Sum_probs=131.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCcccc-------------------------------------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHR-------------------------------------   45 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~-------------------------------------   45 (285)
                      +++++|||||++.||..++++|+++ |.+|++++|+.......                                     
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            3579999999999999999999988 68999999983100000                                     


Q ss_pred             ---CccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc------CCCEEEEecccCCC-----CCCChHHHHHHHHHHH
Q 023244           46 ---NSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA------GCTGVLHVATPVDF-----EDKEPEEVITQRAING  111 (285)
Q Consensus        46 ---~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~  111 (285)
                         ..+....+..+...+.++.++.+|++|.+++.++++      .+|.|||+||....     ...+.++..+++|+.|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G 2155 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDG 2155 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHH
Confidence               000001111122234578899999999998888775      37999999997543     1223345889999999


Q ss_pred             HHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcE
Q 023244          112 TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDL  190 (285)
Q Consensus       112 ~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~  190 (285)
                      +.++++++.... .++||++||..++.+.                      +....|+.+|...+.+.+.++.+. ++++
T Consensus      2156 ~~~Ll~al~~~~-~~~IV~~SSvag~~G~----------------------~gqs~YaaAkaaL~~la~~la~~~~~irV 2212 (2582)
T TIGR02813      2156 LLSLLAALNAEN-IKLLALFSSAAGFYGN----------------------TGQSDYAMSNDILNKAALQLKALNPSAKV 2212 (2582)
T ss_pred             HHHHHHHHHHhC-CCeEEEEechhhcCCC----------------------CCcHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence            999999998765 6789999998876443                      234569999999999888888765 6899


Q ss_pred             EEeccCceecCC
Q 023244          191 VTLIPSMVVGPF  202 (285)
Q Consensus       191 ~i~Rp~~v~g~~  202 (285)
                      +.+.||.+-|+.
T Consensus      2213 ~sI~wG~wdtgm 2224 (2582)
T TIGR02813      2213 MSFNWGPWDGGM 2224 (2582)
T ss_pred             EEEECCeecCCc
Confidence            999999997754

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.59  E-value=1.2e-14  Score=110.96  Aligned_cols=166  Identities=20%  Similarity=0.193  Sum_probs=124.4

Q ss_pred             CCCeEEEecC-CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGG-TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ..|+|||||+ +|.||.+|+++|.+.|+.|++..|+.        +.-..+..    ..++..++.|+++++.+.+... 
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~--------e~M~~L~~----~~gl~~~kLDV~~~~~V~~v~~e   73 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRL--------EPMAQLAI----QFGLKPYKLDVSKPEEVVTVSGE   73 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEcccc--------chHhhHHH----hhCCeeEEeccCChHHHHHHHHH
Confidence            4578999886 58999999999999999999999987        22222221    1268889999999987776543 


Q ss_pred             -------CCCEEEEecccCC-C----CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -------GCTGVLHVATPVD-F----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -------~~d~vih~a~~~~-~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                             ..|+++|+||..- .    ......+..+++|+.|..++.++..+.  ...+++|+++|..++...       
T Consensus        74 vr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf-------  146 (289)
T KOG1209|consen   74 VRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF-------  146 (289)
T ss_pred             HhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc-------
Confidence                   2599999998722 2    122333688999999888877776543  114699999999876444       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFI  203 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~  203 (285)
                                     ++...|.+||++.-.+.+.+.-+   +|++++.+-+|.|-..-.
T Consensus       147 ---------------pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia  190 (289)
T KOG1209|consen  147 ---------------PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATDIA  190 (289)
T ss_pred             ---------------chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecccc
Confidence                           56678999999988888776544   489999999999876543

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=99.58  E-value=5.2e-14  Score=108.68  Aligned_cols=207  Identities=19%  Similarity=0.134  Sum_probs=146.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCEE
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGV   86 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v   86 (285)
                      +.++.|+.||.|+++|+...+.+++|-.+.|+.        . ...+.   .....+.++.+|.....-+.....++..+
T Consensus        54 ~tlvlggnpfsgs~vlk~A~~vv~svgilsen~--------~-k~~l~---sw~~~vswh~gnsfssn~~k~~l~g~t~v  121 (283)
T KOG4288|consen   54 WTLVLGGNPFSGSEVLKNATNVVHSVGILSENE--------N-KQTLS---SWPTYVSWHRGNSFSSNPNKLKLSGPTFV  121 (283)
T ss_pred             HHhhhcCCCcchHHHHHHHHhhceeeeEeeccc--------C-cchhh---CCCcccchhhccccccCcchhhhcCCccc
Confidence            578999999999999999999999999999986        1 11111   12346778888877666555566677888


Q ss_pred             EEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCc
Q 023244           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK  166 (285)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~  166 (285)
                      +-+++...-    . ..+.++|-....+-.+++++.+ +++|+|||... ++..+                    -.+ .
T Consensus       122 ~e~~ggfgn----~-~~m~~ing~ani~a~kaa~~~g-v~~fvyISa~d-~~~~~--------------------~i~-r  173 (283)
T KOG4288|consen  122 YEMMGGFGN----I-ILMDRINGTANINAVKAAAKAG-VPRFVYISAHD-FGLPP--------------------LIP-R  173 (283)
T ss_pred             HHHhcCccc----h-HHHHHhccHhhHHHHHHHHHcC-CceEEEEEhhh-cCCCC--------------------ccc-h
Confidence            877764333    2 4777888888888999999999 99999999654 32221                    012 3


Q ss_pred             hhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccH-------HHHHHHHhcCc--cccccccCcceeeHH
Q 023244          167 SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSV-------RSSLALILGNR--EEYGFLLNTSMVHVD  237 (285)
Q Consensus       167 ~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~~~i~~~  237 (285)
                      .|-.+|+.+|.-+..   .++.+-+++|||.+||...-..+...+       .+.........  .++........+.++
T Consensus       174 GY~~gKR~AE~Ell~---~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve  250 (283)
T KOG4288|consen  174 GYIEGKREAEAELLK---KFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVE  250 (283)
T ss_pred             hhhccchHHHHHHHH---hcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHH
Confidence            699999999986655   567999999999999974333322222       22222222111  222235567899999


Q ss_pred             HHHHHHHHhhcCCCCCceE
Q 023244          238 DVARAHIFLLEYPDAKGRY  256 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~  256 (285)
                      ++|.+.+.++++++..|++
T Consensus       251 ~VA~aal~ai~dp~f~Gvv  269 (283)
T KOG4288|consen  251 SVALAALKAIEDPDFKGVV  269 (283)
T ss_pred             HHHHHHHHhccCCCcCcee
Confidence            9999999999999876653

>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]

Probab=99.55  E-value=3.8e-14  Score=109.17  Aligned_cols=237  Identities=15%  Similarity=0.115  Sum_probs=145.4

Q ss_pred             CCCeEEEecCCchhHHHHHH-----HHHHcC----CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh
Q 023244            4 GKGRVCVTGGTGFIASWLIM-----RLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD   74 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~-----~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   74 (285)
                      +.+..+.-+++|+|+..|..     ++-+.+    |+|++++|++     ..              .++++...|..-..
T Consensus        11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~p-----g~--------------~ritw~el~~~Gip   71 (315)
T KOG3019|consen   11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSP-----GK--------------ARITWPELDFPGIP   71 (315)
T ss_pred             ccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCC-----CC--------------cccccchhcCCCCc
Confidence            44678889999999998887     554444    8999999988     10              13333333322111


Q ss_pred             hHHHHhcCCCEEEEecccCCC-CCCCh----HHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           75 GFDAAIAGCTGVLHVATPVDF-EDKEP----EEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~-~~~~~----~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            -.++.++++++.... ....|    .++.....+..+..|++++.... ..+.+|.+|..++|..+  ....++
T Consensus        72 ------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS--~s~eY~  143 (315)
T KOG3019|consen   72 ------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPS--ESQEYS  143 (315)
T ss_pred             ------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccc--cccccc
Confidence                  134555555554222 11122    12333444556888999988764 35579999988765333  345566


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHH-HHHHHhcCccccc-
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRS-SLALILGNREEYG-  226 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~-~~~~~~~~~~~~~-  226 (285)
                      |+++-         ...+ |- |....|.--.+.-.....+++++|.|.|.|.+-.     .+.+ ..-...+-+-++. 
T Consensus       144 e~~~~---------qgfd-~~-srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGG-----a~~~M~lpF~~g~GGPlGs  207 (315)
T KOG3019|consen  144 EKIVH---------QGFD-IL-SRLCLEWEGAALKANKDVRVALIRIGVVLGKGGG-----ALAMMILPFQMGAGGPLGS  207 (315)
T ss_pred             ccccc---------CChH-HH-HHHHHHHHHHhhccCcceeEEEEEEeEEEecCCc-----chhhhhhhhhhccCCcCCC
Confidence            66642         1122 22 2221121111111122589999999999997521     1111 1111222222232 


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHhhCCC---CCCCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPDAKGRYI-CSSHTLTIQEMAEFLSAKYPE---YPIPT  283 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~---~~~~~  283 (285)
                      .++.+.|||++|++..+-++++++...|+.| +.++..+..|+.+.+...+++   +++|+
T Consensus       208 G~Q~fpWIHv~DL~~li~~ale~~~v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~  268 (315)
T KOG3019|consen  208 GQQWFPWIHVDDLVNLIYEALENPSVKGVINGVAPNPVRNGEFCQQLGSALSRPSWLPVPD  268 (315)
T ss_pred             CCeeeeeeehHHHHHHHHHHHhcCCCCceecccCCCccchHHHHHHHHHHhCCCcccCCcH
Confidence            3778899999999999999999998889988 567899999999999999986   55553

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.53  E-value=6.3e-13  Score=113.16  Aligned_cols=212  Identities=21%  Similarity=0.136  Sum_probs=127.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh-HHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~   82 (285)
                      ..++|+|+||||.+|+.+++.|+++|+.|.++.|+.        .+...+............+..|.....+ +..+.+.
T Consensus        78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~--------~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~  149 (411)
T KOG1203|consen   78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDE--------QKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEA  149 (411)
T ss_pred             CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccCh--------hhhhhhhcccccccccceeeeccccccchhhhhhhh
Confidence            357899999999999999999999999999999987        3332222222222344555555544433 3333332


Q ss_pred             ----CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           83 ----CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        83 ----~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                          ..+++-+++-....+ +. ..-+++-..|++|++++|+..| ++|+|++||++.-.....  .+...         
T Consensus       150 ~~~~~~~v~~~~ggrp~~e-d~-~~p~~VD~~g~knlvdA~~~aG-vk~~vlv~si~~~~~~~~--~~~~~---------  215 (411)
T KOG1203|consen  150 VPKGVVIVIKGAGGRPEEE-DI-VTPEKVDYEGTKNLVDACKKAG-VKRVVLVGSIGGTKFNQP--PNILL---------  215 (411)
T ss_pred             ccccceeEEecccCCCCcc-cC-CCcceecHHHHHHHHHHHHHhC-CceEEEEEeecCcccCCC--chhhh---------
Confidence                235555554333221 01 1223455779999999999999 999999998764322210  00000         


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHH
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDD  238 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D  238 (285)
                           ....+-.+|..+|..+.    +.|++++||||+...-+...... ...       ......+..++.--.+.-.|
T Consensus       216 -----~~~~~~~~k~~~e~~~~----~Sgl~ytiIR~g~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~i~r~~  278 (411)
T KOG1203|consen  216 -----LNGLVLKAKLKAEKFLQ----DSGLPYTIIRPGGLEQDTGGQRE-VVV-------DDEKELLTVDGGAYSISRLD  278 (411)
T ss_pred             -----hhhhhhHHHHhHHHHHH----hcCCCcEEEeccccccCCCCcce-ecc-------cCccccccccccceeeehhh
Confidence                 01234478888887774    56999999999998653211110 000       00001111111112688889


Q ss_pred             HHHHHHHhhcCCCCCc
Q 023244          239 VARAHIFLLEYPDAKG  254 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~  254 (285)
                      +|+..+.++.+.....
T Consensus       279 vael~~~all~~~~~~  294 (411)
T KOG1203|consen  279 VAELVAKALLNEAATF  294 (411)
T ss_pred             HHHHHHHHHhhhhhcc
Confidence            9999999998776544

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.49  E-value=4e-13  Score=103.88  Aligned_cols=212  Identities=16%  Similarity=0.086  Sum_probs=138.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC-CCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +++.+|+||+|..||..++..+.+.+.+.....+...     ...    ++.+.- .+.......+|++....+..+++ 
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~-----~a~----~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~   75 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARL-----LAE----LEGLKVAYGDDFVHVVGDITEEQLLGALREA   75 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcc-----ccc----ccceEEEecCCcceechHHHHHHHHHHHHhh
Confidence            4577999999999999999988888776555544330     011    111100 11233344566666554444443 


Q ss_pred             ------CCCEEEEecccCCC--------CCCChHHHHHHHHHHHHHHHHHHHHhc--CC--ccEEEEeccceeeeccCCC
Q 023244           82 ------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKS--GT--VKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 ------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~--~~~~v~~SS~~~~~~~~~~  143 (285)
                            +-|.|||+||....        .+.+.+..+++.|+.+...|...+.+.  +.  .+.+|++||.+...+-   
T Consensus        76 ~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~---  152 (253)
T KOG1204|consen   76 PRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPF---  152 (253)
T ss_pred             hhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccc---
Confidence                  25999999997553        123344699999999988887776543  21  3789999998865433   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-c-CCcEEEeccCceecCCCCC-----CCCccHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-H-GLDLVTLIPSMVVGPFICP-----KFAGSVRSSLA  216 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~-~i~~~i~Rp~~v~g~~~~~-----~~~~~~~~~~~  216 (285)
                                         +.+..|+.+|++-+.+++.++.+ + ++++..++||.+-++..-.     .+......+.+
T Consensus       153 -------------------~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~  213 (253)
T KOG1204|consen  153 -------------------SSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFK  213 (253)
T ss_pred             -------------------cHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHH
Confidence                               23457999999999999998855 3 8999999999998763211     11111222222


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCC-CCCce
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP-DAKGR  255 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~~  255 (285)
                      .++..+         ..+...+.|..+..++++. ...|.
T Consensus       214 el~~~~---------~ll~~~~~a~~l~~L~e~~~f~sG~  244 (253)
T KOG1204|consen  214 ELKESG---------QLLDPQVTAKVLAKLLEKGDFVSGQ  244 (253)
T ss_pred             HHHhcC---------CcCChhhHHHHHHHHHHhcCccccc
Confidence            233333         5788889999999999876 33444

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.47  E-value=4.5e-13  Score=108.77  Aligned_cols=169  Identities=17%  Similarity=0.153  Sum_probs=121.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCC-CCCEEEEecCCCChhh----HHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGA-SERLRIFHADLSHPDG----FDA   78 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~Dl~d~~~----~~~   78 (285)
                      ++-.+|||||..||.+.+++|+++|.+|+++.|+.        +++.... ++.+. .-.+..+..|.++.+.    +.+
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~--------~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~  120 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQ--------EKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLE  120 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHH
Confidence            46799999999999999999999999999999998        4444433 22211 2357788899987664    444


Q ss_pred             HhcC--CCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCc
Q 023244           79 AIAG--CTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        79 ~~~~--~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      .+.+  +-++|||+|+....       ........+.+|+.++..+.+.    +.+.+ -+-+|++||.+...+.     
T Consensus       121 ~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~-----  194 (312)
T KOG1014|consen  121 KLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPT-----  194 (312)
T ss_pred             HhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccC-----
Confidence            4554  56899999987631       1112245566777775555444    44444 6789999998764332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCC
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~  204 (285)
                                       +....|+.||...+.+...+..++   ||.+-.+-|..|-++...
T Consensus       195 -----------------p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~  239 (312)
T KOG1014|consen  195 -----------------PLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAK  239 (312)
T ss_pred             -----------------hhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccccc
Confidence                             334679999998888877777665   899999999999887543

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.39  E-value=8.1e-13  Score=97.71  Aligned_cols=210  Identities=22%  Similarity=0.229  Sum_probs=144.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++-..+|||+.+.+|...++.|+++|..|.+++...       .+.....+++   +.++.|...|++..+++...+.  
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~-------skg~~vakel---g~~~vf~padvtsekdv~aala~a   77 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQ-------SKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKA   77 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCc-------ccchHHHHHh---CCceEEeccccCcHHHHHHHHHHH
Confidence            345789999999999999999999999999998754       1333334444   4589999999999988888775  


Q ss_pred             -----CCCEEEEecccCCC------C-----CCChHHHHHHHHHHHHHHHHHHHHh---------cCCccEEEEecccee
Q 023244           82 -----GCTGVLHVATPVDF------E-----DKEPEEVITQRAINGTLGILKSCLK---------SGTVKRVVYTSSNAA  136 (285)
Q Consensus        82 -----~~d~vih~a~~~~~------~-----~~~~~~~~~~~n~~~~~~l~~~~~~---------~~~~~~~v~~SS~~~  136 (285)
                           ..|+.+||||+...      .     .-+..+..+++|+.||.|+++....         .|.-.-+|...|..+
T Consensus        78 k~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaa  157 (260)
T KOG1199|consen   78 KAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAA  157 (260)
T ss_pred             HhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeee
Confidence                 36999999997432      0     1122246677899999999877532         122335777777766


Q ss_pred             eeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHH----HHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHH
Q 023244          137 VFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTE----RAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVR  212 (285)
Q Consensus       137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E----~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~  212 (285)
                      +.++                      .....|+.||...-    -+.++++ ..||+++.+-||.+-.|.... .+..+.
T Consensus       158 fdgq----------------------~gqaaysaskgaivgmtlpiardla-~~gir~~tiapglf~tpllss-lpekv~  213 (260)
T KOG1199|consen  158 FDGQ----------------------TGQAAYSASKGAIVGMTLPIARDLA-GDGIRFNTIAPGLFDTPLLSS-LPEKVK  213 (260)
T ss_pred             ecCc----------------------cchhhhhcccCceEeeechhhhhcc-cCceEEEeecccccCChhhhh-hhHHHH
Confidence            5444                      23457999996433    3445544 348999999999987774222 233333


Q ss_pred             HHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce
Q 023244          213 SSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR  255 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  255 (285)
                      .|+.    ...+++.    ..-+..+.+..+-..++++-.+|-
T Consensus       214 ~fla----~~ipfps----rlg~p~eyahlvqaiienp~lnge  248 (260)
T KOG1199|consen  214 SFLA----QLIPFPS----RLGHPHEYAHLVQAIIENPYLNGE  248 (260)
T ss_pred             HHHH----HhCCCch----hcCChHHHHHHHHHHHhCcccCCe
Confidence            3332    3333331    467888899999999999876663

>PTZ00325 malate dehydrogenase; Provisional

Probab=99.36  E-value=9.6e-12  Score=104.54  Aligned_cols=176  Identities=15%  Similarity=0.038  Sum_probs=120.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +|+||+|+|++|.+|+.++..|+.++  .++.+++++.      .......+...   ...  ....+.+|+.++.+.++
T Consensus         7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~------~~g~a~Dl~~~---~~~--~~v~~~td~~~~~~~l~   75 (321)
T PTZ00325          7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG------APGVAADLSHI---DTP--AKVTGYADGELWEKALR   75 (321)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC------Ccccccchhhc---CcC--ceEEEecCCCchHHHhC
Confidence            56799999999999999999998654  6899999843      01111111111   111  23456666666667788


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+||++||........+ ...+..|+..++++++++++++ ++++|+++|..+.....-....+.+...         
T Consensus        76 gaDvVVitaG~~~~~~~tR-~dll~~N~~i~~~i~~~i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~sg---------  144 (321)
T PTZ00325         76 GADLVLICAGVPRKPGMTR-DDLFNTNAPIVRDLVAAVASSA-PKAIVGIVSNPVNSTVPIAAETLKKAGV---------  144 (321)
T ss_pred             CCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHHHHHHHHhhhhhccC---------
Confidence            9999999999866544455 4889999999999999999999 9999999998753222100000011111         


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCC
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~  202 (285)
                      -++...||.+-..+-++-...++..++...-++ +.|+|..
T Consensus       145 ~p~~~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeH  184 (321)
T PTZ00325        145 YDPRKLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGH  184 (321)
T ss_pred             CChhheeechhHHHHHHHHHHHHHhCcChhheE-EEEEeec
Confidence            134456887756666677777777888888887 7777753

>PRK06720 hypothetical protein; Provisional

Probab=99.32  E-value=3.1e-11  Score=92.66  Aligned_cols=126  Identities=13%  Similarity=0.103  Sum_probs=81.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||+.+++.|++.|++|++++|+.+       .......++...+....++.+|+++.+++.++++  
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~-------~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~   87 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQE-------SGQATVEEITNLGGEALFVSYDMEKQGDWQRVISIT   87 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHH-------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999998761       1111112211123357788999999988777653  


Q ss_pred             -----CCCEEEEecccCCCC---CCChHHHHHHHHHHH----HHHHHHHHHhcC------CccEEEEecccee
Q 023244           82 -----GCTGVLHVATPVDFE---DKEPEEVITQRAING----TLGILKSCLKSG------TVKRVVYTSSNAA  136 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~----~~~l~~~~~~~~------~~~~~v~~SS~~~  136 (285)
                           .+|++||+||.....   +...+......|+.+    ++.+.....+++      ..+||-.+||.++
T Consensus        88 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (169)
T PRK06720         88 LNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ  160 (169)
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence                 489999999975531   111111222333333    333333333332      2567888888764

>PLN00106 malate dehydrogenase

Probab=99.27  E-value=6e-11  Score=99.85  Aligned_cols=174  Identities=15%  Similarity=0.030  Sum_probs=119.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+||+|||++|.+|+.++..|+.++  .++.+++.+.     ......    ++.+.....  ...++.+.+++.+.+++
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-----~~g~a~----Dl~~~~~~~--~i~~~~~~~d~~~~l~~   86 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-----TPGVAA----DVSHINTPA--QVRGFLGDDQLGDALKG   86 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-----CCeeEc----hhhhCCcCc--eEEEEeCCCCHHHHcCC
Confidence            4689999999999999999998765  4788888865     111111    111111111  22354455567788899


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|+|||+||......... .+.+..|...++++++.+++.+ ...+|+++|.-+....+--...+.....         .
T Consensus        87 aDiVVitAG~~~~~g~~R-~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~---------~  155 (323)
T PLN00106         87 ADLVIIPAGVPRKPGMTR-DDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGV---------Y  155 (323)
T ss_pred             CCEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCC---------C
Confidence            999999999877655555 4889999999999999999999 8899999987653100000000011111         1


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                      ++...||.++...+++-..+++..|++...+.- .|+|.
T Consensus       156 p~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~-~ViGe  193 (323)
T PLN00106        156 DPKKLFGVTTLDVVRANTFVAEKKGLDPADVDV-PVVGG  193 (323)
T ss_pred             CcceEEEEecchHHHHHHHHHHHhCCChhheEE-EEEEe
Confidence            345679999999999999999889998888754 44553

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.24  E-value=1.1e-10  Score=91.78  Aligned_cols=182  Identities=15%  Similarity=0.118  Sum_probs=123.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-----eEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-----SVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      ++|.++|||+++.+|-.||..|++...     .+++..|+.+    +.++....+++. +...-.++++..|+++..++.
T Consensus         2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~----kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~   77 (341)
T KOG1478|consen    2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMS----KAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVF   77 (341)
T ss_pred             CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChh----HHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHH
Confidence            467899999999999999999998643     4666677761    122222334433 333457889999999987766


Q ss_pred             HHhc-------CCCEEEEecccCCCCC--------------------------------CChHHHHHHHHHHHHHHHHHH
Q 023244           78 AAIA-------GCTGVLHVATPVDFED--------------------------------KEPEEVITQRAINGTLGILKS  118 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~~--------------------------------~~~~~~~~~~n~~~~~~l~~~  118 (285)
                      ++.+       ..|.|+-+||+...+.                                .+.....++.||.|...+++.
T Consensus        78 ~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~  157 (341)
T KOG1478|consen   78 RASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRE  157 (341)
T ss_pred             HHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhh
Confidence            6644       4699999999765422                                233567889999998888877


Q ss_pred             HHhc---CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEE
Q 023244          119 CLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVT  192 (285)
Q Consensus       119 ~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i  192 (285)
                      +...   +...++|++||..+-..      .++-++     ..  +.....+|..||++.+.+..++-+..   |+...+
T Consensus       158 l~pll~~~~~~~lvwtSS~~a~kk------~lsleD-----~q--~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyv  224 (341)
T KOG1478|consen  158 LEPLLCHSDNPQLVWTSSRMARKK------NLSLED-----FQ--HSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYV  224 (341)
T ss_pred             hhhHhhcCCCCeEEEEeecccccc------cCCHHH-----Hh--hhcCCCCcchhHHHHHHHHHHHhccccccchhhhc
Confidence            6543   32448999999864211      111111     00  12345679999999998877765442   677778


Q ss_pred             eccCceecCC
Q 023244          193 LIPSMVVGPF  202 (285)
Q Consensus       193 ~Rp~~v~g~~  202 (285)
                      +-||......
T Consensus       225 v~pg~~tt~~  234 (341)
T KOG1478|consen  225 VQPGIFTTNS  234 (341)
T ss_pred             ccCceeecch
Confidence            8888876554

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.20  E-value=1.3e-10  Score=89.84  Aligned_cols=102  Identities=20%  Similarity=0.250  Sum_probs=75.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      |+++|||||||+|. +++.|+++|++|++++|++        +....+.. .+. ..++.++.+|++|.+++.+++++  
T Consensus         1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~--------~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l   70 (177)
T PRK08309          1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARRE--------VKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTI   70 (177)
T ss_pred             CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCH--------HHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHH
Confidence            47999999998876 9999999999999999976        33333222 221 34788889999999988887753  


Q ss_pred             -----CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc----EEEEeccce
Q 023244           83 -----CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK----RVVYTSSNA  135 (285)
Q Consensus        83 -----~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~----~~v~~SS~~  135 (285)
                           +|.+|+.+-                 +.++.++.++|++.+ ++    +|+++=...
T Consensus        71 ~~~g~id~lv~~vh-----------------~~~~~~~~~~~~~~g-v~~~~~~~~h~~gs~  114 (177)
T PRK08309         71 EKNGPFDLAVAWIH-----------------SSAKDALSVVCRELD-GSSETYRLFHVLGSA  114 (177)
T ss_pred             HHcCCCeEEEEecc-----------------ccchhhHHHHHHHHc-cCCCCceEEEEeCCc
Confidence                 466665432                 345678999999999 88    888775443

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=99.08  E-value=1.9e-09  Score=91.44  Aligned_cols=118  Identities=14%  Similarity=-0.019  Sum_probs=80.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-------CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-------YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .+|+||||+|++|+.++..|+..+       .++.+++++..     .........++.+   .......|+....++.+
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~-----~~~~~g~~~Dl~d---~~~~~~~~~~~~~~~~~   74 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPA-----LKALEGVVMELQD---CAFPLLKSVVATTDPEE   74 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCc-----cccccceeeehhh---ccccccCCceecCCHHH
Confidence            579999999999999999998744       58999998651     0000000001100   01122235555567778


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  132 (285)
                      .++++|+|||+||.......+. ...++.|+...+.+.+.++++. +-..+|.+|
T Consensus        75 ~l~~aDiVI~tAG~~~~~~~~R-~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvs  128 (325)
T cd01336          75 AFKDVDVAILVGAMPRKEGMER-KDLLKANVKIFKEQGEALDKYAKKNVKVLVVG  128 (325)
T ss_pred             HhCCCCEEEEeCCcCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEec
Confidence            8899999999999877654454 4889999999999999998884 234455555

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.06  E-value=9.6e-09  Score=87.45  Aligned_cols=173  Identities=16%  Similarity=0.069  Sum_probs=106.2

Q ss_pred             CCCeEEEecCCchhHHH--HHHHHHHcCCeEEEEecCCCCccccCccc--------hhhhh-cCCCCCCCEEEEecCCCC
Q 023244            4 GKGRVCVTGGTGFIASW--LIMRLLDHGYSVTTTVRSELDPEHRNSKD--------LSFLK-NLPGASERLRIFHADLSH   72 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~Dl~d   72 (285)
                      .+|++||||+++.+|.+  +++.| +.|.+|+++++...    ....+        ...+. .....+..+..+.+|+++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~----~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss  114 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKP----GTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFS  114 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcc----hhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCC
Confidence            35899999999999999  89999 99999998885331    00000        01111 111112356778999999


Q ss_pred             hhhHHHHhc-------CCCEEEEecccCCCCC-------------------------------------CChHHHHHHHH
Q 023244           73 PDGFDAAIA-------GCTGVLHVATPVDFED-------------------------------------KEPEEVITQRA  108 (285)
Q Consensus        73 ~~~~~~~~~-------~~d~vih~a~~~~~~~-------------------------------------~~~~~~~~~~n  108 (285)
                      .+.++++++       ++|+|||++|......                                     ....+....+.
T Consensus       115 ~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~  194 (398)
T PRK13656        115 DEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVK  194 (398)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHH
Confidence            988877765       4799999999763311                                     11111223345


Q ss_pred             HHHHHHHHHHHHh---cC---CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHH
Q 023244          109 INGTLGILKSCLK---SG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF  182 (285)
Q Consensus       109 ~~~~~~l~~~~~~---~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  182 (285)
                      ++|......++..   .+   .-.++|-+|...    .        |.++.        .-.....|.+|...|..++.+
T Consensus       195 vMggedw~~Wi~al~~a~lla~g~~~va~TY~G----~--------~~t~p--------~Y~~g~mG~AKa~LE~~~r~L  254 (398)
T PRK13656        195 VMGGEDWELWIDALDEAGVLAEGAKTVAYSYIG----P--------ELTHP--------IYWDGTIGKAKKDLDRTALAL  254 (398)
T ss_pred             hhccchHHHHHHHHHhcccccCCcEEEEEecCC----c--------ceeec--------ccCCchHHHHHHHHHHHHHHH
Confidence            6666443333322   21   124555554322    1        11110        001135799999999999888


Q ss_pred             HHHc---CCcEEEeccCceecC
Q 023244          183 AEEH---GLDLVTLIPSMVVGP  201 (285)
Q Consensus       183 ~~~~---~i~~~i~Rp~~v~g~  201 (285)
                      +.+.   |+++.++.++.+-+.
T Consensus       255 a~~L~~~giran~i~~g~~~T~  276 (398)
T PRK13656        255 NEKLAAKGGDAYVSVLKAVVTQ  276 (398)
T ss_pred             HHHhhhcCCEEEEEecCcccch
Confidence            7664   789999999998765

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.06  E-value=3.6e-08  Score=76.86  Aligned_cols=210  Identities=13%  Similarity=0.104  Sum_probs=131.7

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++||+|-.  ..|+..+++.|.++|.++.......        +..+..+++........++++|+++.++++.+|+
T Consensus         5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e--------~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~   76 (259)
T COG0623           5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE--------RLEKRVEELAEELGSDLVLPCDVTNDESIDALFA   76 (259)
T ss_pred             CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH--------HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHH
Confidence            57999999964  5799999999999999998888766        3444444443322345678999999999888886


Q ss_pred             -------CCCEEEEecccCCCC---------CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             ..|.++|+.|....+         ..+.....+++-..+...+.++++.. .+-..+|-++    |.+...- 
T Consensus        77 ~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLt----Ylgs~r~-  151 (259)
T COG0623          77 TIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLT----YLGSERV-  151 (259)
T ss_pred             HHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEE----eccceee-
Confidence                   369999999875531         11112233333334444455555543 1124455433    2222100 


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                       -|.++..|.+|+..|.-++.++.+.   |+|++.+..|.+-+--... +..+... ... ...
T Consensus       152 -----------------vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasg-I~~f~~~-l~~-~e~  211 (259)
T COG0623         152 -----------------VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASG-IGDFRKM-LKE-NEA  211 (259)
T ss_pred             -----------------cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhc-cccHHHH-HHH-HHh
Confidence                             1345789999999999998888775   6899999888874321111 1112111 111 122


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ..++     +.-+.++|+.....+++..-.
T Consensus       212 ~aPl-----~r~vt~eeVG~tA~fLlSdLs  236 (259)
T COG0623         212 NAPL-----RRNVTIEEVGNTAAFLLSDLS  236 (259)
T ss_pred             hCCc-----cCCCCHHHhhhhHHHHhcchh
Confidence            2233     367889999999999997643

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=98.98  E-value=1.6e-08  Score=85.47  Aligned_cols=175  Identities=13%  Similarity=0.005  Sum_probs=113.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGF   76 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~   76 (285)
                      .+||.|+||+|.+|+.++..|+..|.       ++.+++......  ........+.... ....++++. .      ..
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~--~a~g~a~Dl~~~~~~~~~~~~i~-~------~~   72 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALK--ALEGVAMELEDCAFPLLAEIVIT-D------DP   72 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCccc--ccceeehhhhhccccccCceEEe-c------Cc
Confidence            46899999999999999999988764       688888754100  0001111111110 000122221 1      12


Q ss_pred             HHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                      .+.++++|+||.+||.......+.. +.++.|+...+.+.+.+++.++ -..+|.+|-. +-.-    .....+...   
T Consensus        73 ~~~~~daDivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNP-vD~~----t~~~~k~sg---  143 (322)
T cd01338          73 NVAFKDADWALLVGAKPRGPGMERA-DLLKANGKIFTAQGKALNDVASRDVKVLVVGNP-CNTN----ALIAMKNAP---  143 (322)
T ss_pred             HHHhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCc-HHHH----HHHHHHHcC---
Confidence            3456789999999998766555554 8899999999999999999873 4556666521 1000    000000000   


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCC
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~  202 (285)
                          . -++...||.++..++++...+++..+++...+|..+|||+.
T Consensus       144 ----~-~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         144 ----D-IPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             ----C-CChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence                0 13345799999999999999999999999999999999985

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.97  E-value=4e-09  Score=90.09  Aligned_cols=77  Identities=23%  Similarity=0.303  Sum_probs=65.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ||+|+|.|| |++|+.+++.|++++ .+|++.+|+.        ++...+....  .++++..+.|+.|.+++.+++++.
T Consensus         1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~--------~~~~~i~~~~--~~~v~~~~vD~~d~~al~~li~~~   69 (389)
T COG1748           1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSK--------EKCARIAELI--GGKVEALQVDAADVDALVALIKDF   69 (389)
T ss_pred             CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCH--------HHHHHHHhhc--cccceeEEecccChHHHHHHHhcC
Confidence            478999999 999999999999998 8999999997        4444443331  238999999999999999999999


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+|||++.+
T Consensus        70 d~VIn~~p~   78 (389)
T COG1748          70 DLVINAAPP   78 (389)
T ss_pred             CEEEEeCCc
Confidence            999999875

>PRK09620 hypothetical protein; Provisional

Probab=98.88  E-value=6.5e-09  Score=83.52  Aligned_cols=82  Identities=18%  Similarity=0.216  Sum_probs=57.7

Q ss_pred             CCCeEEEecCC----------------chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGT----------------GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+||||+|.                ||+|++||++|+.+|++|+++++...       ....   ..+ ....+..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~-------~~~~---~~~-~~~~~~~V~   70 (229)
T PRK09620          2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFA-------EKPN---DIN-NQLELHPFE   70 (229)
T ss_pred             CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCc-------CCCc---ccC-CceeEEEEe
Confidence            47899999885                99999999999999999999986430       0000   000 012344556


Q ss_pred             cCCCChhhHHHHhc--CCCEEEEecccCCCC
Q 023244           68 ADLSHPDGFDAAIA--GCTGVLHVATPVDFE   96 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~--~~d~vih~a~~~~~~   96 (285)
                      .|....+.+.++++  ++|+|||+||..++.
T Consensus        71 s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         71 GIIDLQDKMKSIITHEKVDAVIMAAAGSDWV  101 (229)
T ss_pred             cHHHHHHHHHHHhcccCCCEEEECcccccee
Confidence            64444467788785  589999999997763

>PRK05086 malate dehydrogenase; Provisional

Probab=98.86  E-value=5.6e-08  Score=82.06  Aligned_cols=118  Identities=14%  Similarity=0.053  Sum_probs=82.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHH-c--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLD-H--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||+|+||||.+|++++..|.. .  ++++.+++|++        .......++.+. .....+.+  .+.+++.+.+++
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~--------~~~g~alDl~~~-~~~~~i~~--~~~~d~~~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP--------VTPGVAVDLSHI-PTAVKIKG--FSGEDPTPALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC--------CCcceehhhhcC-CCCceEEE--eCCCCHHHHcCC
Confidence            5899999999999999998854 2  46788888865        111110111111 11112222  223455566688


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  136 (285)
                      +|+||.++|......... ...+..|....+++++++++.+ .+++|.+.|.=+
T Consensus        70 ~DiVIitaG~~~~~~~~R-~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~  121 (312)
T PRK05086         70 ADVVLISAGVARKPGMDR-SDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPV  121 (312)
T ss_pred             CCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCch
Confidence            999999999876654455 4889999999999999999998 888988887643

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.84  E-value=2.4e-08  Score=80.57  Aligned_cols=92  Identities=13%  Similarity=0.163  Sum_probs=58.0

Q ss_pred             CCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC--hhhHHHHhcCCCEEEEec
Q 023244           13 GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAIAGCTGVLHVA   90 (285)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~~d~vih~a   90 (285)
                      +||++|++|+++|+++|++|+++.|..        ...      +....++.++..+..+  .+.+.+.++++|+|||+|
T Consensus        24 SSG~iG~aLA~~L~~~G~~V~li~r~~--------~~~------~~~~~~v~~i~v~s~~~m~~~l~~~~~~~DivIh~A   89 (229)
T PRK06732         24 STGQLGKIIAETFLAAGHEVTLVTTKT--------AVK------PEPHPNLSIIEIENVDDLLETLEPLVKDHDVLIHSM   89 (229)
T ss_pred             cchHHHHHHHHHHHhCCCEEEEEECcc--------ccc------CCCCCCeEEEEEecHHHHHHHHHHHhcCCCEEEeCC
Confidence            489999999999999999999998754        100      0001255665544322  245666677899999999


Q ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 023244           91 TPVDFEDKEPEEVITQRAINGTLGILKSCLK  121 (285)
Q Consensus        91 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  121 (285)
                      |..++...   ...-..+...+.++.+++++
T Consensus        90 Avsd~~~~---~~~~~~~~~~~~~v~~~~~~  117 (229)
T PRK06732         90 AVSDYTPV---YMTDLEEVSASDNLNEFLTK  117 (229)
T ss_pred             ccCCceeh---hhhhhhhhhhhhhhhhhhcc
Confidence            98764211   11122334445566666654

>cd00704 MDH Malate dehydrogenase

Probab=98.82  E-value=7.8e-08  Score=81.44  Aligned_cols=106  Identities=12%  Similarity=0.018  Sum_probs=76.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh------
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP------   73 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~------   73 (285)
                      ||.||||+|.+|+.++..|+..+.       ++.+++++..      .             +..+....|+.|.      
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~------~-------------~~~~g~~~Dl~d~~~~~~~   62 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPA------M-------------KALEGVVMELQDCAFPLLK   62 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCc------c-------------CccceeeeehhhhcccccC
Confidence            799999999999999999987652       4888888651      0             0112223333332      


Q ss_pred             -----hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEec
Q 023244           74 -----DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTS  132 (285)
Q Consensus        74 -----~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  132 (285)
                           ....+.++++|+|||+||......+... +.+..|+...+.+.+.+++.+ +-..+|.+|
T Consensus        63 ~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~-dll~~N~~i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          63 GVVITTDPEEAFKDVDVAILVGAFPRKPGMERA-DLLRKNAKIFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             CcEEecChHHHhCCCCEEEEeCCCCCCcCCcHH-HHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence                 3456778899999999998776555554 889999999999999999984 444555554

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=98.69  E-value=3.8e-07  Score=77.33  Aligned_cols=162  Identities=15%  Similarity=0.038  Sum_probs=97.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh-----
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD-----   74 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-----   74 (285)
                      +|.|+||+|.+|+.++..|...+.       ++.++++.+.     . +             ..+....|+.|..     
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~-----~-~-------------~a~g~~~Dl~d~~~~~~~   61 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPA-----M-K-------------VLEGVVMELMDCAFPLLD   61 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCc-----c-c-------------ccceeEeehhcccchhcC
Confidence            589999999999999999987542       5888888651     0 0             1122233443332     


Q ss_pred             ------hHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccc
Q 023244           75 ------GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        75 ------~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            ...+.++++|+|||+||.......+. ...++.|+...+.+.+.+++.+ +-..+|.+|- -+..-.    ...
T Consensus        62 ~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr-~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsN-PvDv~t----~v~  135 (324)
T TIGR01758        62 GVVPTHDPAVAFTDVDVAILVGAFPRKEGMER-RDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGN-PANTNA----LVL  135 (324)
T ss_pred             ceeccCChHHHhCCCCEEEEcCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCC-cHHHHH----HHH
Confidence                  33566788999999999876644445 4889999999999999999984 3445555552 110000    000


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                      .+..       +. .++...=..+....-++-..+++..+++..-++-+.|+|.
T Consensus       136 ~~~s-------g~-~~~~vig~gt~LDs~R~r~~la~~l~v~~~~V~~~~V~Ge  181 (324)
T TIGR01758       136 SNYA-------PS-IPPKNFSALTRLDHNRALAQVAERAGVPVSDVKNVIIWGN  181 (324)
T ss_pred             HHHc-------CC-CCcceEEEeeehHHHHHHHHHHHHhCCChhhceEeEEEEC
Confidence            0000       00 0111112223334455555566667887777766677775

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.60  E-value=3.7e-07  Score=79.93  Aligned_cols=76  Identities=24%  Similarity=0.429  Sum_probs=58.1

Q ss_pred             EEEecCCchhHHHHHHHHHHcC-C-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHG-Y-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|.|| |++|+.+++.|++++ + +|++.+|+.        ++...+.+.. ...++..+..|+.|.+++.++++++|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~--------~~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP--------EKAERLAEKL-LGDRVEAVQVDVNDPESLAELLRGCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH--------HHHHHHHT---TTTTEEEEE--TTTHHHHHHHHTTSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH--------HHHHHHHhhc-cccceeEEEEecCCHHHHHHHHhcCCE
Confidence            799999 999999999999886 4 899999987        4444433210 235899999999999999999999999


Q ss_pred             EEEecccC
Q 023244           86 VLHVATPV   93 (285)
Q Consensus        86 vih~a~~~   93 (285)
                      |||++++.
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999864

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.57  E-value=1.5e-07  Score=74.22  Aligned_cols=81  Identities=20%  Similarity=0.109  Sum_probs=60.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++++|+||+|.+|+.+++.|++.|++|++++|+.        ++...+.+......+......|..+.+++.+.++++
T Consensus        27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~--------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (194)
T cd01078          27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL--------ERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGA   98 (194)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcC
Confidence            457999999999999999999999999999999876        333222211000113445567888988888999999


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+||++...
T Consensus        99 diVi~at~~  107 (194)
T cd01078          99 DVVFAAGAA  107 (194)
T ss_pred             CEEEECCCC
Confidence            999987653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=98.54  E-value=5.7e-07  Score=73.44  Aligned_cols=94  Identities=16%  Similarity=0.190  Sum_probs=67.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+|||+||||. |+.|++.|.+.|++|++..++.        .....+...     ....+..+..|.+++.+.++  ++
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~--------~~~~~~~~~-----g~~~v~~g~l~~~~l~~~l~~~~i   66 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTS--------EGKHLYPIH-----QALTVHTGALDPQELREFLKRHSI   66 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccC--------Ccccccccc-----CCceEEECCCCHHHHHHHHHhcCC
Confidence            57999999999 9999999999999999999987        222222221     22345566777788888886  48


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEE
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV  128 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~  128 (285)
                      |+||+.+.++.              ...+.++.++|++.+ +..+
T Consensus        67 ~~VIDAtHPfA--------------~~is~~a~~a~~~~~-ipyl   96 (256)
T TIGR00715        67 DILVDATHPFA--------------AQITTNATAVCKELG-IPYV   96 (256)
T ss_pred             CEEEEcCCHHH--------------HHHHHHHHHHHHHhC-CcEE
Confidence            99999765322              134567788888887 5433

This enzyme was found to be a monomer by gel filtration.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=98.49  E-value=1.4e-06  Score=64.88  Aligned_cols=115  Identities=16%  Similarity=0.081  Sum_probs=76.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCC-CCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGAS-ERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||.|+||+|.+|+.++..|...+  .++.+++++..    ........+....... .+.....   .+.+    .+++
T Consensus         1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~----~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~----~~~~   69 (141)
T PF00056_consen    1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINED----KAEGEALDLSHASAPLPSPVRITS---GDYE----ALKD   69 (141)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHH----HHHHHHHHHHHHHHGSTEEEEEEE---SSGG----GGTT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcc----cceeeehhhhhhhhhccccccccc---cccc----cccc
Confidence            589999999999999999999876  48999998751    0001111111111111 1222222   2222    3468


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||-+||......... .+.++.|....+.+.+.+++.++-..++.+|
T Consensus        70 aDivvitag~~~~~g~sR-~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   70 ADIVVITAGVPRKPGMSR-LDLLEANAKIVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             ESEEEETTSTSSSTTSSH-HHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred             ccEEEEeccccccccccH-HHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence            999999999876655555 4889999999999999999998444555554

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.44  E-value=7.4e-07  Score=77.53  Aligned_cols=74  Identities=19%  Similarity=0.190  Sum_probs=58.0

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+|+||||                ||.+|.+++++|..+|++|++++++.        ..     ..+   ..  +..
T Consensus       187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~--------~~-----~~~---~~--~~~  248 (399)
T PRK05579        187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPV--------NL-----PTP---AG--VKR  248 (399)
T ss_pred             CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCc--------cc-----cCC---CC--cEE
Confidence            4689999999                89999999999999999999998865        10     011   11  235


Q ss_pred             cCCCChhhHHHHhc----CCCEEEEecccCCC
Q 023244           68 ADLSHPDGFDAAIA----GCTGVLHVATPVDF   95 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~----~~d~vih~a~~~~~   95 (285)
                      .|+++.+++.+.++    .+|++||+||+.++
T Consensus       249 ~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        249 IDVESAQEMLDAVLAALPQADIFIMAAAVADY  280 (399)
T ss_pred             EccCCHHHHHHHHHHhcCCCCEEEEccccccc
Confidence            79999887777664    58999999998766

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.44  E-value=6.2e-07  Score=74.39  Aligned_cols=80  Identities=23%  Similarity=0.418  Sum_probs=63.3

Q ss_pred             eEEEecCCchhHHHHHHHHHH----cCCeEEEEecCCCCccccCccchh-hhhcCCC-----CCCCEEEEecCCCChhhH
Q 023244            7 RVCVTGGTGFIASWLIMRLLD----HGYSVTTTVRSELDPEHRNSKDLS-FLKNLPG-----ASERLRIFHADLSHPDGF   76 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~Dl~d~~~~   76 (285)
                      -++|.|||||.|.++++++.+    .+...-+..|+.        ++.. -++....     ..+.+ ++.+|..|++++
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~--------~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl   77 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNE--------KKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASL   77 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCH--------HHHHHHHHHHhhccCCCcccce-EEEecCCCHHHH
Confidence            489999999999999999998    677888888987        3332 2222211     13344 889999999999


Q ss_pred             HHHhcCCCEEEEecccCCC
Q 023244           77 DAAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~   95 (285)
                      .++.+++-+|+||+|+...
T Consensus        78 ~emak~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   78 DEMAKQARVIVNCVGPYRF   96 (423)
T ss_pred             HHHHhhhEEEEecccccee
Confidence            9999999999999998765

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.43  E-value=6.3e-07  Score=75.86  Aligned_cols=73  Identities=23%  Similarity=0.204  Sum_probs=52.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-C-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-G-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|+||||+|+||+.+|++|+++ | .+++++.|+.        .+...+...        +..+|+.   .+.+.+.
T Consensus       154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~--------~rl~~La~e--------l~~~~i~---~l~~~l~  214 (340)
T PRK14982        154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ--------ERLQELQAE--------LGGGKIL---SLEEALP  214 (340)
T ss_pred             CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH--------HHHHHHHHH--------hccccHH---hHHHHHc
Confidence            4689999999999999999999864 5 5888888876        233322211        1123333   3667888


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      ++|+|||+++....
T Consensus       215 ~aDiVv~~ts~~~~  228 (340)
T PRK14982        215 EADIVVWVASMPKG  228 (340)
T ss_pred             cCCEEEECCcCCcC
Confidence            99999999987554

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=98.39  E-value=1.5e-05  Score=67.54  Aligned_cols=119  Identities=13%  Similarity=0.150  Sum_probs=79.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |.+..+||.|+|+ |.+|+.++..|+..|.  ++.+++++..    ........+........++.....   +   ++ 
T Consensus         2 ~~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~----~~~g~~~Dl~~~~~~~~~~~i~~~---~---~~-   69 (315)
T PRK00066          2 MKKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKE----KAEGDAMDLSHAVPFTSPTKIYAG---D---YS-   69 (315)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCc----hhHHHHHHHHhhccccCCeEEEeC---C---HH-
Confidence            4456789999998 9999999999998885  7899998651    000111112221111123333322   2   32 


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      .++++|+||-.||.......+. ...++.|....+.+++.+++.+.-..+|.+|
T Consensus        70 ~~~~adivIitag~~~k~g~~R-~dll~~N~~i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         70 DCKDADLVVITAGAPQKPGETR-LDLVEKNLKIFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             HhCCCCEEEEecCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            3679999999999876654555 4889999999999999999987334555444

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=98.34  E-value=7.5e-06  Score=69.22  Aligned_cols=121  Identities=14%  Similarity=0.127  Sum_probs=76.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |||.|+|+||++|+.++..|+..|+  +|++++|...... ......+....+........+   ..+  .+.+ .++++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~-l~~~~~dl~d~~~~~~~~~~i---~~~--~d~~-~l~~a   73 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEK-LKGLRLDIYDALAAAGIDAEI---KIS--SDLS-DVAGS   73 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccc-cccccchhhhchhccCCCcEE---EEC--CCHH-HhCCC
Confidence            5899999999999999999999886  5999998430000 000000111111011111111   111  1233 37899


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      |+||-+++......... ...++.|....+.+++.+.+.++-..+|.+++.
T Consensus        74 DiViitag~p~~~~~~r-~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~np  123 (309)
T cd05294          74 DIVIITAGVPRKEGMSR-LDLAKKNAKIVKKYAKQIAEFAPDTKILVVTNP  123 (309)
T ss_pred             CEEEEecCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            99999999765543333 378889999999999999888644567777653

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK05442 malate dehydrogenase; Provisional

Probab=98.28  E-value=2e-05  Score=66.95  Aligned_cols=177  Identities=15%  Similarity=0.022  Sum_probs=100.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSH   72 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d   72 (285)
                      |.. ++||.|+||+|.+|+.++..|+..+.       ++.+++..+...  ........+.... ....++.+.      
T Consensus         1 ~~~-~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~--~~~g~a~Dl~~~~~~~~~~~~i~------   71 (326)
T PRK05442          1 MKA-PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALK--ALEGVVMELDDCAFPLLAGVVIT------   71 (326)
T ss_pred             CCC-CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCccc--ccceeehhhhhhhhhhcCCcEEe------
Confidence            553 56899999999999999999987653       688888754100  0001111111110 000122211      


Q ss_pred             hhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCC
Q 023244           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                       ....+.++++|+||-+||.......+. .+.++.|..-.+.+.+.+++.. +-..+|.+|- -+-.-.    ....+..
T Consensus        72 -~~~y~~~~daDiVVitaG~~~k~g~tR-~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN-PvDv~t----~v~~k~s  144 (326)
T PRK05442         72 -DDPNVAFKDADVALLVGARPRGPGMER-KDLLEANGAIFTAQGKALNEVAARDVKVLVVGN-PANTNA----LIAMKNA  144 (326)
T ss_pred             -cChHHHhCCCCEEEEeCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC-chHHHH----HHHHHHc
Confidence             122345678999999999866555555 4889999999999999999865 3445555552 110000    0000000


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                      +       . -++....|.+-...-++-..+++..+++..-++...|+|.
T Consensus       145 ~-------g-~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~vV~Ge  186 (326)
T PRK05442        145 P-------D-LPAENFTAMTRLDHNRALSQLAAKAGVPVADIKKMTVWGN  186 (326)
T ss_pred             C-------C-CCHHHEEeeeHHHHHHHHHHHHHHhCcChHHeEEeEEEEC
Confidence            0       0 0111234444445555656666667887777766666664

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.24  E-value=3.1e-06  Score=68.20  Aligned_cols=64  Identities=14%  Similarity=0.135  Sum_probs=46.0

Q ss_pred             CCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-------CCCE
Q 023244           13 GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-------GCTG   85 (285)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   85 (285)
                      +||+||+++++.|+++|++|+++++..        ..    ...       ....+|+.+.++..++++       .+|+
T Consensus        23 SSGgIG~AIA~~la~~Ga~Vvlv~~~~--------~l----~~~-------~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        23 STGHLGKIITETFLSAGHEVTLVTTKR--------AL----KPE-------PHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             cccHHHHHHHHHHHHCCCEEEEEcChh--------hc----ccc-------cCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            489999999999999999999987632        00    000       013478888776665543       4799


Q ss_pred             EEEecccCCC
Q 023244           86 VLHVATPVDF   95 (285)
Q Consensus        86 vih~a~~~~~   95 (285)
                      +||+||...+
T Consensus        84 LVnnAgv~d~   93 (227)
T TIGR02114        84 LIHSMAVSDY   93 (227)
T ss_pred             EEECCEeccc
Confidence            9999997654

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=98.24  E-value=2.6e-05  Score=66.11  Aligned_cols=171  Identities=15%  Similarity=0.029  Sum_probs=99.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhhhcCCCC----CCCEEEEecCCCCh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLPGA----SERLRIFHADLSHP   73 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d~   73 (285)
                      ..||.|+||+|.+|+.++..|+..+.       ++.+++....     .........++.+.    ..++++.       
T Consensus         3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~-----~~~a~g~a~Dl~~~~~~~~~~~~i~-------   70 (323)
T TIGR01759         3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPA-----MKALEGVAMELEDCAFPLLAGVVAT-------   70 (323)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCc-----ccccchHHHHHhhccccccCCcEEe-------
Confidence            45899999999999999999988773       7888887540     00111111111110    0111111       


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCcccccCCC
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                      ....+.++++|+||..||......++.. +.++.|+...+.+.+.+++.++ -..++.+| .-+..-.    ....+..+
T Consensus        71 ~~~~~~~~daDvVVitAG~~~k~g~tR~-dll~~Na~i~~~i~~~i~~~~~~~~iiivvs-NPvDv~t----~v~~k~s~  144 (323)
T TIGR01759        71 TDPEEAFKDVDAALLVGAFPRKPGMERA-DLLSKNGKIFKEQGKALNKVAKKDVKVLVVG-NPANTNA----LIASKNAP  144 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC-CcHHHHH----HHHHHHcC
Confidence            1233456789999999998766555554 8999999999999999999983 33444444 2110000    00000000


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                             . -++....|.+....-++-..+++..+++..-++-..|+|.
T Consensus       145 -------g-~p~~rViG~t~LDs~R~r~~la~~l~v~~~~V~~~~V~Ge  185 (323)
T TIGR01759       145 -------D-IPPKNFSAMTRLDHNRAKYQLAAKAGVPVSDVKNVIIWGN  185 (323)
T ss_pred             -------C-CCHHHEEEeeHHHHHHHHHHHHHHhCcChHHeEEeEEEec
Confidence                   0 0112234444455555555566667887777766667775

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.22  E-value=3.7e-06  Score=70.44  Aligned_cols=85  Identities=13%  Similarity=0.060  Sum_probs=59.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++|+|| |.+|+.++..|++.|.+ |++++|+.     ...++... .+++......+.....|+++.+++.+.++
T Consensus       125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~-----~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~  198 (289)
T PRK12548        125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD-----DFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA  198 (289)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc-----hHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc
Confidence            3578999999 89999999999999985 99999975     10011111 12221112344556788888888888888


Q ss_pred             CCCEEEEecccCC
Q 023244           82 GCTGVLHVATPVD   94 (285)
Q Consensus        82 ~~d~vih~a~~~~   94 (285)
                      .+|+|||+-....
T Consensus       199 ~~DilINaTp~Gm  211 (289)
T PRK12548        199 SSDILVNATLVGM  211 (289)
T ss_pred             cCCEEEEeCCCCC
Confidence            8999999876543

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=98.21  E-value=2.7e-05  Score=65.52  Aligned_cols=174  Identities=15%  Similarity=0.063  Sum_probs=99.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |||.|+|++|.+|+.++..|+.++  .++.+++.+.     ..... -.+....   ....+....  ..+++.+.++++
T Consensus         1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~-----a~g~a-lDL~~~~---~~~~i~~~~--~~~~~y~~~~da   69 (310)
T cd01337           1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVN-----TPGVA-ADLSHIN---TPAKVTGYL--GPEELKKALKGA   69 (310)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCc-----cceee-hHhHhCC---CcceEEEec--CCCchHHhcCCC
Confidence            489999999999999999998877  4788888752     11111 1111111   111111110  112244567899


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+||-+||.......+.. +.++.|....+.+.+.+++.++-..+|.+|=..-..     ...+++..+..     ..-+
T Consensus        70 DivvitaG~~~k~g~tR~-dll~~N~~i~~~i~~~i~~~~p~a~vivvtNPvDv~-----~~i~t~~~~~~-----s~~p  138 (310)
T cd01337          70 DVVVIPAGVPRKPGMTRD-DLFNINAGIVRDLATAVAKACPKALILIISNPVNST-----VPIAAEVLKKA-----GVYD  138 (310)
T ss_pred             CEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEccCchhhH-----HHHHHHHHHHh-----cCCC
Confidence            999999998766555554 899999999999999999988444455444321000     00000000000     0001


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCC
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~  202 (285)
                      +....|.+-.-.-++-...++..+++..-++ +.|+|..
T Consensus       139 ~~rviG~~~LDs~R~~~~la~~l~v~~~~V~-~~v~GeH  176 (310)
T cd01337         139 PKRLFGVTTLDVVRANTFVAELLGLDPAKVN-VPVIGGH  176 (310)
T ss_pred             HHHEEeeechHHHHHHHHHHHHhCcCHHHEE-EEEEecC
Confidence            1122333333445555566666777766676 7777754

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.21  E-value=0.00076  Score=50.15  Aligned_cols=187  Identities=16%  Similarity=0.166  Sum_probs=107.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC--Ch-h----hHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS--HP-D----GFDA   78 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~--d~-~----~~~~   78 (285)
                      .+|+|-|+-|-+|+.+++.+..++|.|.-++...      + ++          .+.-.++..|-+  +. +    ++-+
T Consensus         4 grVivYGGkGALGSacv~~FkannywV~siDl~e------N-e~----------Ad~sI~V~~~~swtEQe~~v~~~vg~   66 (236)
T KOG4022|consen    4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSE------N-EQ----------ADSSILVDGNKSWTEQEQSVLEQVGS   66 (236)
T ss_pred             ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecc------c-cc----------ccceEEecCCcchhHHHHHHHHHHHH
Confidence            5899999999999999999999999998888765      0 00          011222333322  11 1    1222


Q ss_pred             Hhc--CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCccccc
Q 023244           79 AIA--GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        79 ~~~--~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                      .+.  ++|.|++.||-..-.       ..+. +.+++..+...-.-...+.++=+..-++.+..+....+.         
T Consensus        67 sL~gekvDav~CVAGGWAGGnAksKdl~KNa-DLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~g---------  136 (236)
T KOG4022|consen   67 SLQGEKVDAVFCVAGGWAGGNAKSKDLVKNA-DLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGG---------  136 (236)
T ss_pred             hhcccccceEEEeeccccCCCcchhhhhhch-hhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCC---------
Confidence            232  479999999754331       1122 234444333332222233322113345555444432222         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCc----EEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLD----LVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~----~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                  .|.-..||.+|.+...+...++.+. |+|    ...+-|-.+-.|..+..++..             .
T Consensus       137 ------------TPgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~A-------------D  191 (236)
T KOG4022|consen  137 ------------TPGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNA-------------D  191 (236)
T ss_pred             ------------CCcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCC-------------c
Confidence                        1334579999999999999988653 554    334445555566544443321             1


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      +     -+|.+...+++.++.....
T Consensus       192 f-----ssWTPL~fi~e~flkWtt~  211 (236)
T KOG4022|consen  192 F-----SSWTPLSFISEHFLKWTTE  211 (236)
T ss_pred             c-----cCcccHHHHHHHHHHHhcc
Confidence            1     2688888888888877753

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=98.19  E-value=6e-06  Score=71.54  Aligned_cols=101  Identities=17%  Similarity=0.216  Sum_probs=62.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH-Hhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-AIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~   81 (285)
                      ++|+|.|.||||++|+.|++.|.++ +.++..+.++.        +.-+.+...     ...+...|+.+.+.++. .++
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~--------saG~~i~~~-----~~~l~~~~~~~~~~~~~~~~~  103 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR--------KAGQSFGSV-----FPHLITQDLPNLVAVKDADFS  103 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh--------hcCCCchhh-----CccccCccccceecCCHHHhc
Confidence            4579999999999999999999988 67999988754        111111110     11112234433322222 247


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceee
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  137 (285)
                      ++|+||-+.+.          .       ....++..+ +.+  .++|-+|+.+-.
T Consensus       104 ~~DvVf~Alp~----------~-------~s~~i~~~~-~~g--~~VIDlSs~fRl  139 (381)
T PLN02968        104 DVDAVFCCLPH----------G-------TTQEIIKAL-PKD--LKIVDLSADFRL  139 (381)
T ss_pred             CCCEEEEcCCH----------H-------HHHHHHHHH-hCC--CEEEEcCchhcc
Confidence            89999976542          1       334556665 345  789999997643

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=98.16  E-value=7.2e-06  Score=66.01  Aligned_cols=74  Identities=16%  Similarity=0.211  Sum_probs=59.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      |+++|.|+ |-+|+.+|+.|.+.|++|+++++++        +........   ......+.+|-+|++.|+++ ++++|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~--------~~~~~~~~~---~~~~~~v~gd~t~~~~L~~agi~~aD   68 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDE--------ERVEEFLAD---ELDTHVVIGDATDEDVLEEAGIDDAD   68 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCH--------HHHHHHhhh---hcceEEEEecCCCHHHHHhcCCCcCC
Confidence            57999998 9999999999999999999999988        443332210   12678899999999999998 77899


Q ss_pred             EEEEecc
Q 023244           85 GVLHVAT   91 (285)
Q Consensus        85 ~vih~a~   91 (285)
                      +++-.-+
T Consensus        69 ~vva~t~   75 (225)
T COG0569          69 AVVAATG   75 (225)
T ss_pred             EEEEeeC
Confidence            9995533

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=98.09  E-value=2.7e-05  Score=65.93  Aligned_cols=114  Identities=13%  Similarity=0.111  Sum_probs=76.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCC-CCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +||.|+|+ |.+|+.++..|+..|  +++++++++..    ........+..... .........   .+   .+ .+++
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~----~~~~~a~dL~~~~~~~~~~~~i~~---~~---~~-~l~~   68 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEE----KAEGEALDLEDALAFLPSPVKIKA---GD---YS-DCKD   68 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc----hhhHhHhhHHHHhhccCCCeEEEc---CC---HH-HhCC
Confidence            47999997 999999999999988  68999999761    00111111111100 011222222   12   22 3578


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||.+++.......+.. ..++.|..-.+.+.+.+++.++-..++.+|
T Consensus        69 aDIVIitag~~~~~g~~R~-dll~~N~~i~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          69 ADIVVITAGAPQKPGETRL-DLLEKNAKIMKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             CCEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence            9999999998766544554 889999999999999999988444555555

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=98.08  E-value=8.2e-05  Score=62.77  Aligned_cols=114  Identities=14%  Similarity=0.098  Sum_probs=75.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||.|+|++|.+|+.++..|+..+.  ++.++++++     .. ...-.+....   ....+....  +.+++.+.++++|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-----a~-g~a~DL~~~~---~~~~i~~~~--~~~~~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-----AA-GVAADLSHIP---TAASVKGFS--GEEGLENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-----Cc-EEEchhhcCC---cCceEEEec--CCCchHHHcCCCC
Confidence            589999999999999999988764  788888754     11 1111111111   111221101  1122445678999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +||-+||.......+.. +.++.|..-.+.+.+.+++.++-..+|.+|
T Consensus        70 ivvitaG~~~~~g~~R~-dll~~N~~I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        70 VVVIPAGVPRKPGMTRD-DLFNVNAGIVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             EEEEeCCCCCCCCccHH-HHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence            99999998766555554 889999999999999999988344455444

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=98.02  E-value=0.00021  Score=59.75  Aligned_cols=117  Identities=17%  Similarity=0.072  Sum_probs=77.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +||.|+|| |++|+.++..|+.++  .++.+++....    ........+.........-..+.+| .+    .+.++++
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~----~~~G~a~DL~~~~~~~~~~~~i~~~-~~----y~~~~~a   70 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEE----KAEGVALDLSHAAAPLGSDVKITGD-GD----YEDLKGA   70 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccc----cccchhcchhhcchhccCceEEecC-CC----hhhhcCC
Confidence            58999999 999999999998775  48889988741    0001111111111111111222222 11    2345789


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      |+|+-.||.......... +.++.|..-...+.+.+.+.+ .+-++.+-|.
T Consensus        71 DiVvitAG~prKpGmtR~-DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtN  119 (313)
T COG0039          71 DIVVITAGVPRKPGMTRL-DLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTN  119 (313)
T ss_pred             CEEEEeCCCCCCCCCCHH-HHHHhhHHHHHHHHHHHHhhC-CCeEEEEecC
Confidence            999999998887666664 899999999999999999998 4455554443

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.01  E-value=2.6e-05  Score=60.55  Aligned_cols=77  Identities=17%  Similarity=0.279  Sum_probs=48.2

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+||||+|                ||-.|..|++++..+|++|+.+....        .       .+ ....+..+.
T Consensus         2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~--------~-------~~-~p~~~~~i~   65 (185)
T PF04127_consen    2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS--------S-------LP-PPPGVKVIR   65 (185)
T ss_dssp             TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT--------S------------TTEEEEE
T ss_pred             CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc--------c-------cc-ccccceEEE
Confidence            4688999976                79999999999999999999998764        0       00 012565555


Q ss_pred             cCCCC--hhhHHHHhcCCCEEEEecccCCCC
Q 023244           68 ADLSH--PDGFDAAIAGCTGVLHVATPVDFE   96 (285)
Q Consensus        68 ~Dl~d--~~~~~~~~~~~d~vih~a~~~~~~   96 (285)
                      ..-.+  .+.+.+.+++.|++||+||+.++.
T Consensus        66 v~sa~em~~~~~~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   66 VESAEEMLEAVKELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             -SSHHHHHHHHHHHGGGGSEEEE-SB--SEE
T ss_pred             ecchhhhhhhhccccCcceeEEEecchhhee
Confidence            43221  134455556789999999998874

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PRK06223 malate dehydrogenase; Reviewed

Probab=97.99  E-value=6.9e-05  Score=63.54  Aligned_cols=115  Identities=11%  Similarity=0.046  Sum_probs=73.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccc-hhhhhcCCCC-CCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKD-LSFLKNLPGA-SERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ||||.|+|+ |.+|+.++..|+..|. +|++++++.+     ..+. ...+.+.... .....     ++...+++ .++
T Consensus         2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~-----~~~~~~~dl~~~~~~~~~~~~-----i~~~~d~~-~~~   69 (307)
T PRK06223          2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEG-----VPQGKALDIAEAAPVEGFDTK-----ITGTNDYE-DIA   69 (307)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCc-----hhHHHHHHHHhhhhhcCCCcE-----EEeCCCHH-HHC
Confidence            469999999 9999999999998765 9999999762     1110 0011111000 00111     11111233 367


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++|+||.+++......... .+.+..|+.-.+.+++.+.+..+-..+|..|
T Consensus        70 ~aDiVii~~~~p~~~~~~r-~~~~~~n~~i~~~i~~~i~~~~~~~~viv~t  119 (307)
T PRK06223         70 GSDVVVITAGVPRKPGMSR-DDLLGINAKIMKDVAEGIKKYAPDAIVIVVT  119 (307)
T ss_pred             CCCEEEECCCCCCCcCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            8999999998765543343 3777889999999999998887334455554

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=97.99  E-value=2.4e-05  Score=67.95  Aligned_cols=102  Identities=19%  Similarity=0.138  Sum_probs=68.2

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+|+||||                ||.+|..++++|..+|++|+++.+...        .     ..+   ..+  ..
T Consensus       184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~--------~-----~~~---~~~--~~  245 (390)
T TIGR00521       184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVS--------L-----LTP---PGV--KS  245 (390)
T ss_pred             CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCc--------c-----CCC---CCc--EE
Confidence            4689999999                467999999999999999999887651        0     011   122  45


Q ss_pred             cCCCChhhH-HHHh----cCCCEEEEecccCCCCCCCh----HH---HHHHHHHHHHHHHHHHHHhcC
Q 023244           68 ADLSHPDGF-DAAI----AGCTGVLHVATPVDFEDKEP----EE---VITQRAINGTLGILKSCLKSG  123 (285)
Q Consensus        68 ~Dl~d~~~~-~~~~----~~~d~vih~a~~~~~~~~~~----~~---~~~~~n~~~~~~l~~~~~~~~  123 (285)
                      .|+++.+++ +.++    ...|++|++||..++.....    ..   ..+..|+..+..+++.+++..
T Consensus       246 ~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~  313 (390)
T TIGR00521       246 IKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIK  313 (390)
T ss_pred             EEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhC
Confidence            788888777 4444    35799999999977621110    00   112345556666777777654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>PLN02602 lactate dehydrogenase

Probab=97.99  E-value=0.00025  Score=60.81  Aligned_cols=115  Identities=14%  Similarity=0.124  Sum_probs=75.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +||.|+|+ |.+|+.++..|+..+.  ++.+++.+..    ........+...........+...  .|   ++ .++++
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~----~~~g~a~DL~~~~~~~~~~~i~~~--~d---y~-~~~da  106 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPD----KLRGEMLDLQHAAAFLPRTKILAS--TD---YA-VTAGS  106 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCc----hhhHHHHHHHhhhhcCCCCEEEeC--CC---HH-HhCCC
Confidence            69999997 9999999999988764  7888888651    001111112221111112222211  12   33 26799


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |+||-+||.......+.. +.+..|+.-.+.+.+.+++.++-..+|.+|
T Consensus       107 DiVVitAG~~~k~g~tR~-dll~~N~~I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        107 DLCIVTAGARQIPGESRL-NLLQRNVALFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CEEEECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999998665544554 888999999999999999987444555555

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=97.96  E-value=0.00037  Score=59.00  Aligned_cols=114  Identities=17%  Similarity=0.165  Sum_probs=74.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |+|.|.|+ |.+|+.++..|+..|  .+|.+++++..    ........+...............   |   + +.++++
T Consensus         1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~----~~~g~a~dl~~~~~~~~~~~i~~~---d---~-~~l~~a   68 (308)
T cd05292           1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKA----KAEGEAMDLAHGTPFVKPVRIYAG---D---Y-ADCKGA   68 (308)
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCch----hhhhHHHHHHccccccCCeEEeeC---C---H-HHhCCC
Confidence            47999998 999999999999988  58999998761    000111112221111112222222   2   2 236789


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |+||-+++.......+.. .....|+...+.+.+.+++.++-..++..+
T Consensus        69 DiViita~~~~~~~~~r~-dl~~~n~~i~~~~~~~l~~~~~~giiiv~t  116 (308)
T cd05292          69 DVVVITAGANQKPGETRL-DLLKRNVAIFKEIIPQILKYAPDAILLVVT  116 (308)
T ss_pred             CEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999997665444444 788899999999999999887334455443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.96  E-value=2e-05  Score=74.77  Aligned_cols=168  Identities=15%  Similarity=0.204  Sum_probs=110.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeE-EEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSV-TTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V-~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ..|.++|+||-|..|-+|+++|.++|..- ++..|+..    +..........-...+-.+.+-.-|++..+.-.+++++
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGi----rtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~ 1842 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGI----RTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEE 1842 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccc----hhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHH
Confidence            35789999999999999999999999754 44556541    11111111111111122444445788888888888864


Q ss_pred             ------CCEEEEecccCCC---CCCCh--HHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccC
Q 023244           83 ------CTGVLHVATPVDF---EDKEP--EEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        83 ------~d~vih~a~~~~~---~~~~~--~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                            +--|+|+|+....   ....+  .++.-+.-+.+|.||=+..++.. ..+.||.+||.+ .+..          
T Consensus      1843 s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvs-cGRG---------- 1911 (2376)
T KOG1202|consen 1843 SNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVS-CGRG---------- 1911 (2376)
T ss_pred             hhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeec-ccCC----------
Confidence                  4678999987665   22222  12222334557888877777654 478899999987 4433          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCce
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMV  198 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v  198 (285)
                                 +...+-||.+..++|+++.... ..|+|-+.+--|.|
T Consensus      1912 -----------N~GQtNYG~aNS~MERiceqRr-~~GfPG~AiQWGAI 1947 (2376)
T KOG1202|consen 1912 -----------NAGQTNYGLANSAMERICEQRR-HEGFPGTAIQWGAI 1947 (2376)
T ss_pred             -----------CCcccccchhhHHHHHHHHHhh-hcCCCcceeeeecc
Confidence                       2344669999999999997754 56888888877765

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=97.96  E-value=0.00043  Score=58.89  Aligned_cols=118  Identities=14%  Similarity=0.097  Sum_probs=74.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +++||.|+|| |.+|+.++..|+..|. +|.+++.++...   .....+.............+...  .|   + +.+++
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~---~~~~ld~~~~~~~~~~~~~I~~~--~d---~-~~l~~   74 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIP---QGKALDISHSNVIAGSNSKVIGT--NN---Y-EDIAG   74 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchh---hHHHHHHHhhhhccCCCeEEEEC--CC---H-HHhCC
Confidence            3468999996 9999999999998885 888889877210   00011111111111112222211  12   3 24579


Q ss_pred             CCEEEEecccCCCCCC-----ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDK-----EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||.+++.......     +. ...+..|+.-.+.+++.+.+.++...+|..|
T Consensus        75 aDiVI~tag~~~~~~~~~~~~~r-~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~s  128 (321)
T PTZ00082         75 SDVVIVTAGLTKRPGKSDKEWNR-DDLLPLNAKIMDEVAEGIKKYCPNAFVIVIT  128 (321)
T ss_pred             CCEEEECCCCCCCCCCCcCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            9999999987654332     33 4678889999999999999887333566555

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=97.95  E-value=0.00019  Score=51.91  Aligned_cols=99  Identities=22%  Similarity=0.305  Sum_probs=55.3

Q ss_pred             eEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      ||.|+||||++|+.|++.|.++- .++..+..+..    ...+........+  ........-+ .+.+.+    +++|+
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~----~~g~~~~~~~~~~--~~~~~~~~~~-~~~~~~----~~~Dv   69 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR----SAGKPLSEVFPHP--KGFEDLSVED-ADPEEL----SDVDV   69 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT----TTTSBHHHTTGGG--TTTEEEBEEE-TSGHHH----TTESE
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc----ccCCeeehhcccc--ccccceeEee-cchhHh----hcCCE
Confidence            68999999999999999999863 46666655440    1112222211100  0111111122 333323    78999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ||.+.+.                 .....+.+.+.+.|  .++|=.|+..
T Consensus        70 vf~a~~~-----------------~~~~~~~~~~~~~g--~~ViD~s~~~  100 (121)
T PF01118_consen   70 VFLALPH-----------------GASKELAPKLLKAG--IKVIDLSGDF  100 (121)
T ss_dssp             EEE-SCH-----------------HHHHHHHHHHHHTT--SEEEESSSTT
T ss_pred             EEecCch-----------------hHHHHHHHHHhhCC--cEEEeCCHHH
Confidence            9988551                 11234555666677  4788777653

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.95  E-value=5.8e-05  Score=62.50  Aligned_cols=115  Identities=15%  Similarity=0.004  Sum_probs=76.6

Q ss_pred             EEEecCCchhHHHHHHHHHHcC----CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |.|+||+|.+|..++..|+..|    .++.+++++..    ........+.......     ....++-.+++.+.++++
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~----~l~~~~~dl~~~~~~~-----~~~~i~~~~d~~~~~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEE----KLKGVAMDLQDAVEPL-----ADIKVSITDDPYEAFKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcc----cchHHHHHHHHhhhhc-----cCcEEEECCchHHHhCCC
Confidence            5799999999999999999888    68999998761    0111111122221110     011222122345667899


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |+||-.++.......... .....|+...+.+++.+++.++-..+|..|
T Consensus        72 DiVv~t~~~~~~~g~~r~-~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t  119 (263)
T cd00650          72 DVVIITAGVGRKPGMGRL-DLLKRNVPIVKEIGDNIEKYSPDAWIIVVS  119 (263)
T ss_pred             CEEEECCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            999999998776555553 778889999999999999887444555543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.93  E-value=1.7e-05  Score=65.50  Aligned_cols=79  Identities=19%  Similarity=0.221  Sum_probs=60.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ..-++|-|||||.|..++++|..+|.+-.+-.|+.        .+...+....  ++..  -.+++-++..+++++.+++
T Consensus         6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~--------~kl~~l~~~L--G~~~--~~~p~~~p~~~~~~~~~~~   73 (382)
T COG3268           6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS--------AKLDALRASL--GPEA--AVFPLGVPAALEAMASRTQ   73 (382)
T ss_pred             ceeEEEEccccchhHHHHHHHHHcCCchhhccCCH--------HHHHHHHHhc--Cccc--cccCCCCHHHHHHHHhcce
Confidence            35699999999999999999999999887778887        4555444321  1222  3345555889999999999


Q ss_pred             EEEEecccCCC
Q 023244           85 GVLHVATPVDF   95 (285)
Q Consensus        85 ~vih~a~~~~~   95 (285)
                      +|+||+|+...
T Consensus        74 VVlncvGPyt~   84 (382)
T COG3268          74 VVLNCVGPYTR   84 (382)
T ss_pred             EEEeccccccc
Confidence            99999998665

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.93  E-value=0.00012  Score=62.29  Aligned_cols=116  Identities=15%  Similarity=0.088  Sum_probs=75.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccch-hhhhcCCC-CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDL-SFLKNLPG-ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +.+||.|+|| |.+|+.++..|+..| .++.+++.+..     ..+.. -.+..... ......+ .    ...+++ .+
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~-----~~~g~~lDl~~~~~~~~~~~~i-~----~~~d~~-~l   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKG-----VPQGKALDLKHFSTLVGSNINI-L----GTNNYE-DI   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCc-----cchhHHHHHhhhccccCCCeEE-E----eCCCHH-Hh
Confidence            3579999998 999999999998888 68888888761     11100 00111100 0111111 1    112344 55


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +++|+||.+++......... .+.+..|..-.+.+++.+.+..+-..+|.+|
T Consensus        72 ~~ADiVVitag~~~~~g~~r-~dll~~n~~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         72 KDSDVVVITAGVQRKEEMTR-EDLLTINGKIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             CCCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            89999999998766544444 4788899999999999999887333466554

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.89  E-value=5e-05  Score=66.68  Aligned_cols=168  Identities=13%  Similarity=0.015  Sum_probs=99.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-------CC--eEEEEecCCCCccccCccchhhhhcCCCC----CCCEEEEecCCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-------GY--SVTTTVRSELDPEHRNSKDLSFLKNLPGA----SERLRIFHADLSH   72 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~d   72 (285)
                      -||.|+|++|.+|++++..|+..       +.  ++.+++++..       .......++.+.    ..++.+...   +
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~-------~a~G~amDL~daa~~~~~~v~i~~~---~  170 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQ-------ALEGVAMELEDSLYPLLREVSIGID---P  170 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcc-------hhHHHHHHHHHhhhhhcCceEEecC---C
Confidence            48999999999999999999887       54  7888887661       111111122110    112222221   2


Q ss_pred             hhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHh-cCCccEEEEeccceeeeccCCCCcccccCC
Q 023244           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK-SGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                          .+.++++|+||-.||.......+.. +.++.|+...+.+.+.+.+ .++-..+|.+|-..-.     ......+..
T Consensus       171 ----ye~~kdaDiVVitAG~prkpG~tR~-dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPvDv-----~t~v~~k~s  240 (444)
T PLN00112        171 ----YEVFQDAEWALLIGAKPRGPGMERA-DLLDINGQIFAEQGKALNEVASRNVKVIVVGNPCNT-----NALICLKNA  240 (444)
T ss_pred             ----HHHhCcCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcHHH-----HHHHHHHHc
Confidence                2345789999999998766555554 8899999999999999999 5644556655521100     000000000


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                      .        ..+....-..+....-++-..++++.+++..-+.-..|.|.
T Consensus       241 g--------~~~~rViGtgT~LDsaR~r~~LA~~l~V~~~~V~~~~V~Ge  282 (444)
T PLN00112        241 P--------NIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGN  282 (444)
T ss_pred             C--------CCCcceEEeeccHHHHHHHHHHHHHhCcCHHHcccceEEec
Confidence            0        00111222233344445555566667888777777777775

>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.89  E-value=0.00011  Score=62.77  Aligned_cols=98  Identities=15%  Similarity=0.159  Sum_probs=57.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCe---EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYS---VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |+ +|++|.|+||||++|+.|++.|.+++|.   +..+....        +.-+.+. .   . .   ...++.+.+.. 
T Consensus         1 m~-~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~--------~aG~~l~-~---~-~---~~l~~~~~~~~-   62 (336)
T PRK05671          1 MS-QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSE--------SAGHSVP-F---A-G---KNLRVREVDSF-   62 (336)
T ss_pred             CC-CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcc--------cCCCeec-c---C-C---cceEEeeCChH-
Confidence            65 3579999999999999999999977663   33332221        0000010 1   0 1   12333333322 


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  136 (285)
                      + ++++|+|+-+.+.          .       ....+++.+.+.|  .++|=.|+..-
T Consensus        63 ~-~~~vD~vFla~p~----------~-------~s~~~v~~~~~~G--~~VIDlS~~fR  101 (336)
T PRK05671         63 D-FSQVQLAFFAAGA----------A-------VSRSFAEKARAAG--CSVIDLSGALP  101 (336)
T ss_pred             H-hcCCCEEEEcCCH----------H-------HHHHHHHHHHHCC--CeEEECchhhc
Confidence            2 4689999976541          0       1123666676777  57888888753

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=97.89  E-value=0.00041  Score=58.70  Aligned_cols=116  Identities=16%  Similarity=0.128  Sum_probs=75.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+||.|+|+ |.+|+.++..|+..|  .++.+++.+..    ........+...........+...  .|   ++. +++
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~----~~~g~a~Dl~~~~~~~~~~~v~~~--~d---y~~-~~~   71 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVED----KLKGEAMDLQHGSAFLKNPKIEAD--KD---YSV-TAN   71 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc----HHHHHHHHHHHhhccCCCCEEEEC--CC---HHH-hCC
Confidence            569999997 999999999998876  47888887651    001111112221111111122221  12   333 679


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||-+||......... ...++.|..-.+.+.+.+++.++-..+|.+|
T Consensus        72 adivvitaG~~~k~g~~R-~dll~~N~~i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          72 SKVVIVTAGARQNEGESR-LDLVQRNVDIFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence            999999999866544445 4889999999999999999987444555555

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.88  E-value=0.00013  Score=62.54  Aligned_cols=94  Identities=17%  Similarity=0.127  Sum_probs=56.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +++|+|.||||++|+.|++.|.+++|   ++.++.+..        +..+.+. .    ........|+.+.     .++
T Consensus         1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~--------~~g~~l~-~----~g~~i~v~d~~~~-----~~~   62 (334)
T PRK14874          1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR--------SAGKELS-F----KGKELKVEDLTTF-----DFS   62 (334)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc--------cCCCeee-e----CCceeEEeeCCHH-----HHc
Confidence            36899999999999999999999776   457776654        1111111 1    0123333455432     235


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ++|+||-+.+..                 .+..+++.+.+.|  .++|=.|+..
T Consensus        63 ~vDvVf~A~g~g-----------------~s~~~~~~~~~~G--~~VIDlS~~~   97 (334)
T PRK14874         63 GVDIALFSAGGS-----------------VSKKYAPKAAAAG--AVVIDNSSAF   97 (334)
T ss_pred             CCCEEEECCChH-----------------HHHHHHHHHHhCC--CEEEECCchh
Confidence            899999776521                 1123444454566  3777777754

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=97.87  E-value=0.00018  Score=60.72  Aligned_cols=116  Identities=15%  Similarity=0.120  Sum_probs=72.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |||.|.|+ |++|+.++..|+..|+ +|++++...     ...+ ...+ +..... ........++-..++++ ++++|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~-----~l~~-g~a~-d~~~~~-~~~~~~~~i~~t~d~~~-~~~aD   71 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVE-----GIPQ-GKAL-DMYEAS-PVGGFDTKVTGTNNYAD-TANSD   71 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCC-----ChhH-HHHH-hhhhhh-hccCCCcEEEecCCHHH-hCCCC
Confidence            58999998 9999999999999876 899999865     1111 0111 110000 00000011111122333 57899


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +||-+++.......... +.+..|....+.+++.+.+..+-..+|.+|
T Consensus        72 iVIitag~p~~~~~sR~-~l~~~N~~iv~~i~~~I~~~~p~~~iIv~t  118 (305)
T TIGR01763        72 IVVITAGLPRKPGMSRE-DLLSMNAGIVREVTGRIMEHSPNPIIVVVS  118 (305)
T ss_pred             EEEEcCCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999997655444443 788899999999999998887334455544

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=97.87  E-value=7.2e-05  Score=72.13  Aligned_cols=77  Identities=16%  Similarity=0.064  Sum_probs=59.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCe-------------EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYS-------------VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD   69 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   69 (285)
                      .+|+|+|.|| |++|+..++.|++. +.+             |++.+++.        +..+.+.+.   .++++.+..|
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~--------~~a~~la~~---~~~~~~v~lD  635 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL--------KDAKETVEG---IENAEAVQLD  635 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH--------HHHHHHHHh---cCCCceEEee
Confidence            4689999998 99999999999875 333             66667665        333333322   1256788999


Q ss_pred             CCChhhHHHHhcCCCEEEEeccc
Q 023244           70 LSHPDGFDAAIAGCTGVLHVATP   92 (285)
Q Consensus        70 l~d~~~~~~~~~~~d~vih~a~~   92 (285)
                      +.|.+++.++++++|+||.+...
T Consensus       636 v~D~e~L~~~v~~~DaVIsalP~  658 (1042)
T PLN02819        636 VSDSESLLKYVSQVDVVISLLPA  658 (1042)
T ss_pred             cCCHHHHHHhhcCCCEEEECCCc
Confidence            99999999999999999998865

>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated

Probab=97.84  E-value=0.00012  Score=62.89  Aligned_cols=100  Identities=19%  Similarity=0.227  Sum_probs=59.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEE-ecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF-HADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~   82 (285)
                      |++|+|+||||++|+.+++.|.+. +++++++.++.        +....+.+..   +++... ..++.+.+..  .+++
T Consensus         2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~--------~~g~~l~~~~---~~~~~~~~~~~~~~~~~--~~~~   68 (343)
T PRK00436          2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRS--------SAGKPLSDVH---PHLRGLVDLVLEPLDPE--ILAG   68 (343)
T ss_pred             CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECcc--------ccCcchHHhC---cccccccCceeecCCHH--HhcC
Confidence            579999999999999999999876 67887776643        1111111100   011111 1233333332  3467


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  136 (285)
                      +|+|+-+...       .          ....++..+.+.|  +++|=.|+..-
T Consensus        69 vD~Vf~alP~-------~----------~~~~~v~~a~~aG--~~VID~S~~fR  103 (343)
T PRK00436         69 ADVVFLALPH-------G----------VSMDLAPQLLEAG--VKVIDLSADFR  103 (343)
T ss_pred             CCEEEECCCc-------H----------HHHHHHHHHHhCC--CEEEECCcccC
Confidence            9999876442       0          1124455565666  78998888754

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=97.83  E-value=0.00055  Score=57.80  Aligned_cols=111  Identities=14%  Similarity=0.061  Sum_probs=74.7

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCC----CC-CCEEEEecCCCChhhHHHH
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPG----AS-ERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ||.|.|+ |.+|+.++..|+.++.  ++.+++.+..       .......++.+    .. .++.+..+|       .+.
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~-------~a~g~a~DL~~~~~~~~~~~~~i~~~~-------y~~   65 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEG-------VAEGEALDFHHATALTYSTNTKIRAGD-------YDD   65 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc-------hhhHHHHHHHhhhccCCCCCEEEEECC-------HHH
Confidence            5899999 9999999999988774  7888888651       11111122211    11 234444333       234


Q ss_pred             hcCCCEEEEecccCCCCCCCh-HHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           80 IAGCTGVLHVATPVDFEDKEP-EEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      ++++|+||-.||......... ..+.++.|..-.+.+.+.+++.+ ..-++.+-|
T Consensus        66 ~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvs  119 (307)
T cd05290          66 CADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVT-KEAVIILIT  119 (307)
T ss_pred             hCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEec
Confidence            678999999999866543331 13889999999999999999998 444444443

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]

Probab=97.83  E-value=0.00024  Score=57.45  Aligned_cols=116  Identities=16%  Similarity=0.070  Sum_probs=75.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeE---EEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSV---TTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V---~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+-||.|.||.|.||+.|...| +....|   .+.+-...   -.-.....++      +.+.  .....+-+++++.++
T Consensus        27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~---~GVaaDlSHI------~T~s--~V~g~~g~~~L~~al   94 (345)
T KOG1494|consen   27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANT---PGVAADLSHI------NTNS--SVVGFTGADGLENAL   94 (345)
T ss_pred             CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccC---Cccccccccc------CCCC--ceeccCChhHHHHHh
Confidence            3468999999999999988766 444332   23332210   0000111111      1111  122333456899999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +++|+|+--||..+...... ++.|++|..-.+.|..++.++.+...+.+||
T Consensus        95 ~~advVvIPAGVPRKPGMTR-DDLFn~NAgIv~~l~~aia~~cP~A~i~vIs  145 (345)
T KOG1494|consen   95 KGADVVVIPAGVPRKPGMTR-DDLFNINAGIVKTLAAAIAKCCPNALILVIS  145 (345)
T ss_pred             cCCCEEEecCCCCCCCCCcH-HHhhhcchHHHHHHHHHHHhhCccceeEeec
Confidence            99999999999988765555 3899999999999999999987344444444

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=97.82  E-value=0.00031  Score=50.26  Aligned_cols=70  Identities=20%  Similarity=0.303  Sum_probs=54.6

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCCEE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCTGV   86 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~v   86 (285)
                      |+|.|. |-+|..+++.|.+.+.+|+++++++        +....+.+.     .+.++.+|.+|++.++++ +++++.|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~--------~~~~~~~~~-----~~~~i~gd~~~~~~l~~a~i~~a~~v   66 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP--------ERVEELREE-----GVEVIYGDATDPEVLERAGIEKADAV   66 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSH--------HHHHHHHHT-----TSEEEES-TTSHHHHHHTTGGCESEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc--------HHHHHHHhc-----ccccccccchhhhHHhhcCccccCEE
Confidence            688988 7899999999999777999999987        455555444     578999999999999886 4568888


Q ss_pred             EEecc
Q 023244           87 LHVAT   91 (285)
Q Consensus        87 ih~a~   91 (285)
                      +-+..
T Consensus        67 v~~~~   71 (116)
T PF02254_consen   67 VILTD   71 (116)
T ss_dssp             EEESS
T ss_pred             EEccC
Confidence            86543

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.82  E-value=6.6e-05  Score=67.24  Aligned_cols=72  Identities=21%  Similarity=0.223  Sum_probs=58.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      |+|+|+|+ |.+|+.+++.|.++|++|+++++++        +....+.+.    ..+.++.+|.++...+.++ ++++|
T Consensus         1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~--------~~~~~~~~~----~~~~~~~gd~~~~~~l~~~~~~~a~   67 (453)
T PRK09496          1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE--------ERLRRLQDR----LDVRTVVGNGSSPDVLREAGAEDAD   67 (453)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH--------HHHHHHHhh----cCEEEEEeCCCCHHHHHHcCCCcCC
Confidence            47999998 9999999999999999999999987        444443321    2678889999999999888 77899


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      .||-+.
T Consensus        68 ~vi~~~   73 (453)
T PRK09496         68 LLIAVT   73 (453)
T ss_pred             EEEEec
Confidence            888664

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.76  E-value=7.4e-05  Score=66.90  Aligned_cols=79  Identities=22%  Similarity=0.135  Sum_probs=55.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+|+|+|+++ +|..+++.|++.|++|++.+++...   ...+....+...     ++.++..|..+     +..
T Consensus         1 ~~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~---~~~~~~~~l~~~-----~~~~~~~~~~~-----~~~   66 (450)
T PRK14106          1 MELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED---QLKEALEELGEL-----GIELVLGEYPE-----EFL   66 (450)
T ss_pred             CCcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHHHHhc-----CCEEEeCCcch-----hHh
Confidence            544578999999977 9999999999999999999886410   000111222222     46677788776     234


Q ss_pred             cCCCEEEEecccC
Q 023244           81 AGCTGVLHVATPV   93 (285)
Q Consensus        81 ~~~d~vih~a~~~   93 (285)
                      .++|+||++++..
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            5799999998863

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.76  E-value=0.00035  Score=59.80  Aligned_cols=114  Identities=15%  Similarity=0.207  Sum_probs=71.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCC--ccccC-----c------cch----hhhhcCCCCCCCEEE
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD--PEHRN-----S------KDL----SFLKNLPGASERLRI   65 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~~~-----~------~~~----~~~~~~~~~~~~~~~   65 (285)
                      +.++|+|.|+ |.+|+++++.|+..|. ++++++++...  +....     .      .+.    ..+.++ +..-++..
T Consensus        23 ~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i-np~v~v~~  100 (339)
T PRK07688         23 REKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI-NSDVRVEA  100 (339)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH-CCCcEEEE
Confidence            3568999999 9999999999999997 89999886310  00000     0      111    122222 11224555


Q ss_pred             EecCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeee
Q 023244           66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVF  138 (285)
Q Consensus        66 ~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~  138 (285)
                      +..+++. +.+.+++++.|+||.+..       +.         ..-..+.++|.+.+  .++|+.|+...++
T Consensus       101 ~~~~~~~-~~~~~~~~~~DlVid~~D-------n~---------~~r~~ln~~~~~~~--iP~i~~~~~g~~G  154 (339)
T PRK07688        101 IVQDVTA-EELEELVTGVDLIIDATD-------NF---------ETRFIVNDAAQKYG--IPWIYGACVGSYG  154 (339)
T ss_pred             EeccCCH-HHHHHHHcCCCEEEEcCC-------CH---------HHHHHHHHHHHHhC--CCEEEEeeeeeee
Confidence            6667653 556778889999997632       21         12235667788877  6788887766443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.76  E-value=8.9e-05  Score=54.74  Aligned_cols=77  Identities=17%  Similarity=0.122  Sum_probs=54.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+++++|.|+ |..|+.++..|.+.|.+ |+++.|+.        ++...+.+.- ....+.++..     +++.+.+.+
T Consensus        11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~--------~ra~~l~~~~-~~~~~~~~~~-----~~~~~~~~~   75 (135)
T PF01488_consen   11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTP--------ERAEALAEEF-GGVNIEAIPL-----EDLEEALQE   75 (135)
T ss_dssp             TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSH--------HHHHHHHHHH-TGCSEEEEEG-----GGHCHHHHT
T ss_pred             CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCH--------HHHHHHHHHc-CccccceeeH-----HHHHHHHhh
Confidence            5689999998 88999999999999975 99999987        4444433221 1123444443     345567788


Q ss_pred             CCEEEEecccCCC
Q 023244           83 CTGVLHVATPVDF   95 (285)
Q Consensus        83 ~d~vih~a~~~~~   95 (285)
                      +|+||++.+....
T Consensus        76 ~DivI~aT~~~~~   88 (135)
T PF01488_consen   76 ADIVINATPSGMP   88 (135)
T ss_dssp             ESEEEE-SSTTST
T ss_pred             CCeEEEecCCCCc
Confidence            9999998775544

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=97.76  E-value=0.0009  Score=49.38  Aligned_cols=111  Identities=14%  Similarity=0.174  Sum_probs=69.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCc-------c----ccCccchhhhhcC---CCCCCCEEEEecC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP-------E----HRNSKDLSFLKNL---PGASERLRIFHAD   69 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~-------~----~~~~~~~~~~~~~---~~~~~~~~~~~~D   69 (285)
                      .++|+|.|+ |.+|+.+++.|+..|. ++++++.+....       .    .-...+...+++.   ..+.-+++.+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            468999998 9999999999999997 788888643110       0    0011111111110   0123456667777


Q ss_pred             CCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           70 LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        70 l~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      + +.+...++++++|+||.+..       +.         ..-..+.+.+++.+  .++|+.++..
T Consensus        81 ~-~~~~~~~~~~~~d~vi~~~d-------~~---------~~~~~l~~~~~~~~--~p~i~~~~~g  127 (135)
T PF00899_consen   81 I-DEENIEELLKDYDIVIDCVD-------SL---------AARLLLNEICREYG--IPFIDAGVNG  127 (135)
T ss_dssp             C-SHHHHHHHHHTSSEEEEESS-------SH---------HHHHHHHHHHHHTT---EEEEEEEET
T ss_pred             c-ccccccccccCCCEEEEecC-------CH---------HHHHHHHHHHHHcC--CCEEEEEeec
Confidence            7 45667888889999998743       11         12235667788887  5888877654

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=97.71  E-value=0.00081  Score=60.28  Aligned_cols=167  Identities=22%  Similarity=0.245  Sum_probs=102.9

Q ss_pred             CCeEEEecCC-chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC----CCCCCEEEEecCCCChhhHHHH
Q 023244            5 KGRVCVTGGT-GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP----GASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         5 ~k~ilVtGat-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .+.+|||||+ |-||..++..|++.|.+|++...+-      ..+...+++.+.    ..+...-++..+.....+++.+
T Consensus       396 d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~------s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAl  469 (866)
T COG4982         396 DKVALVTGASKGSIAAAVVARLLAGGATVIATTSRL------SEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDAL  469 (866)
T ss_pred             cceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccc------cHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHH
Confidence            4789999986 8899999999999999999887654      224444444432    2234555667787777666666


Q ss_pred             hc---------------------CCCEEEEecccCCC---C--CCChHHHHHHHHHHHHHHHHHHHHhcCC---c---cE
Q 023244           80 IA---------------------GCTGVLHVATPVDF---E--DKEPEEVITQRAINGTLGILKSCLKSGT---V---KR  127 (285)
Q Consensus        80 ~~---------------------~~d~vih~a~~~~~---~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~---~~  127 (285)
                      ++                     .+|.+|-+|++.-.   .  .... +..+++-+.....++-.+++.+.   +   -+
T Consensus       470 IewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsra-E~~~rilLw~V~Rliggl~~~~s~r~v~~R~h  548 (866)
T COG4982         470 IEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRA-EFAMRILLWNVLRLIGGLKKQGSSRGVDTRLH  548 (866)
T ss_pred             HHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchH-HHHHHHHHHHHHHHHHHhhhhccccCcccceE
Confidence            54                     13788888886332   1  1122 24455545555566655555431   1   13


Q ss_pred             EEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC----CcEEEeccCceecC
Q 023244          128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG----LDLVTLIPSMVVGP  201 (285)
Q Consensus       128 ~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~----i~~~i~Rp~~v~g~  201 (285)
                      +|.-.|..-        +-+               ..-..|+.+|...|.++..++.+.+    +..+--+.|++-|-
T Consensus       549 VVLPgSPNr--------G~F---------------GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGT  603 (866)
T COG4982         549 VVLPGSPNR--------GMF---------------GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGT  603 (866)
T ss_pred             EEecCCCCC--------Ccc---------------CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccc
Confidence            554444221        001               1124699999999999999886653    44455556666554

>cd05295 MDH_like Malate dehydrogenase-like

Probab=97.70  E-value=0.0013  Score=57.96  Aligned_cols=174  Identities=12%  Similarity=0.047  Sum_probs=98.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc---C--Ce--EEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH---G--YS--VTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~---g--~~--V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      -+|+||||+|.||..|+-.+++-   |  ..  +.+++....  ........-.+.+.. .....+.+..       .-.
T Consensus       124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~--~~~l~G~amDL~D~a~pll~~v~i~~-------~~~  194 (452)
T cd05295         124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPEN--LEKLKGLVMEVEDLAFPLLRGISVTT-------DLD  194 (452)
T ss_pred             eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCc--hhhHHHHHHHHHHhHHhhcCCcEEEE-------CCH
Confidence            47999999999999999999763   3  23  444444210  000001111111111 0011233221       123


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                      +.++++|+||-.||.......+. .+.++.|....+.+.+++.+.++ -.+++.+.|.-+---    ........|    
T Consensus       195 ea~~daDvvIitag~prk~G~~R-~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~----t~i~~k~ap----  265 (452)
T cd05295         195 VAFKDAHVIVLLDDFLIKEGEDL-EGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLK----TSILIKYAP----  265 (452)
T ss_pred             HHhCCCCEEEECCCCCCCcCCCH-HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHH----HHHHHHHcC----
Confidence            56789999999999876655555 48899999999999999998873 156666665322000    000000000    


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                         . -++....|.+....-++...++++.+++..-|+-..|.|.
T Consensus       266 ---g-iP~~rVig~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGe  306 (452)
T cd05295         266 ---S-IPRKNIIAVARLQENRAKALLARKLNVNSAGIKDVIVWGN  306 (452)
T ss_pred             ---C-CCHHHEEEecchHHHHHHHHHHHHhCcCHHHceeeEEEEc
Confidence               0 0122334444455566666667777877777766666664

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.65  E-value=0.0011  Score=56.69  Aligned_cols=113  Identities=12%  Similarity=0.160  Sum_probs=70.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc-----C------ccch----hhhhcCCCCCCCEEE
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR-----N------SKDL----SFLKNLPGASERLRI   65 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~-----~------~~~~----~~~~~~~~~~~~~~~   65 (285)
                      +.++|+|.|+ |.+|+++++.|+..|. ++++++++..  ++...     .      ..+.    ..+.+. ...-+++.
T Consensus        23 ~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-np~v~i~~  100 (338)
T PRK12475         23 REKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-NSEVEIVP  100 (338)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH-CCCcEEEE
Confidence            3578999998 7899999999999997 7888888641  11100     0      0111    222222 12335666


Q ss_pred             EecCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceee
Q 023244           66 FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (285)
Q Consensus        66 ~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  137 (285)
                      +..|++ .+.++++++++|+||.+..       +..         .-..+-++|.+.+  .++|+.+....+
T Consensus       101 ~~~~~~-~~~~~~~~~~~DlVid~~D-------~~~---------~r~~in~~~~~~~--ip~i~~~~~g~~  153 (338)
T PRK12475        101 VVTDVT-VEELEELVKEVDLIIDATD-------NFD---------TRLLINDLSQKYN--IPWIYGGCVGSY  153 (338)
T ss_pred             EeccCC-HHHHHHHhcCCCEEEEcCC-------CHH---------HHHHHHHHHHHcC--CCEEEEEecccE
Confidence            777775 4567888899999997632       111         1123456677777  577877665543

>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form

Probab=97.63  E-value=0.0003  Score=60.54  Aligned_cols=99  Identities=18%  Similarity=0.198  Sum_probs=57.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEE-ecCCCCccccCccchhhhhc-CCCCCCCEEEE-ecCCCChhhHHHHhc
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRSELDPEHRNSKDLSFLKN-LPGASERLRIF-HADLSHPDGFDAAIA   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~Dl~d~~~~~~~~~   81 (285)
                      ++|.|.||||++|+.+++.|.++ +.++..+ +++.        ...+.+.+ .+    .+... ..++.+. +.+++.+
T Consensus         1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~--------sagk~~~~~~~----~l~~~~~~~~~~~-~~~~~~~   67 (346)
T TIGR01850         1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRE--------SAGKPVSEVHP----HLRGLVDLNLEPI-DEEEIAE   67 (346)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccch--------hcCCChHHhCc----cccccCCceeecC-CHHHhhc
Confidence            47999999999999999999876 5677754 4332        01111111 11    11111 1112211 2334445


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  136 (285)
                      ++|+||-+....                 ....++..+.+.|  +++|=.|+.+-
T Consensus        68 ~~DvVf~alP~~-----------------~s~~~~~~~~~~G--~~VIDlS~~fR  103 (346)
T TIGR01850        68 DADVVFLALPHG-----------------VSAELAPELLAAG--VKVIDLSADFR  103 (346)
T ss_pred             CCCEEEECCCch-----------------HHHHHHHHHHhCC--CEEEeCChhhh
Confidence            799999775521                 2235566666666  78999998753

This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=97.60  E-value=0.0016  Score=54.92  Aligned_cols=113  Identities=14%  Similarity=0.108  Sum_probs=73.8

Q ss_pred             EEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            8 VCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |.|.|+ |++|+.++..|+..|  .++++++++..    ........+.+.........+...  .|   . +.++++|+
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~----~~~g~~~DL~~~~~~~~~~~i~~~--~~---~-~~l~~aDi   69 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEE----KAKGDALDLSHASAFLATGTIVRG--GD---Y-ADAADADI   69 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc----HHHHHHHhHHHhccccCCCeEEEC--CC---H-HHhCCCCE
Confidence            468887 889999999999888  68999998761    001111112222111112222221  12   2 35678999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ||.+++.......+.. ..+..|+...+.+.+.+++.++-..+|.+|
T Consensus        70 VIitag~p~~~~~~R~-~l~~~n~~i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          70 VVITAGAPRKPGETRL-DLINRNAPILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             EEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence            9999998665444554 888899999999999999987444555555

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=97.59  E-value=0.0013  Score=57.02  Aligned_cols=115  Identities=13%  Similarity=-0.013  Sum_probs=71.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-e----EEE--E--ecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhh
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-S----VTT--T--VRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDG   75 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~   75 (285)
                      -||.|+||+|.+|+.++..|+..+. .    |.+  +  +++..    ......-.+.+.. ....++.+...   +   
T Consensus        45 ~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~----~a~g~a~DL~d~a~~~~~~v~i~~~---~---  114 (387)
T TIGR01757        45 VNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKE----ALEGVAMELEDSLYPLLREVSIGID---P---  114 (387)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccch----hhhHHHHHHHHhhhhhcCceEEecC---C---
Confidence            4899999999999999999988763 2    333  2  44431    0001111111111 00112222211   2   


Q ss_pred             HHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEec
Q 023244           76 FDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTS  132 (285)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~S  132 (285)
                       .+.++++|+||-.||.......+.. +.++.|+...+.+.+.+.+.. +-..+|.+|
T Consensus       115 -y~~~kdaDIVVitAG~prkpg~tR~-dll~~N~~I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       115 -YEVFEDADWALLIGAKPRGPGMERA-DLLDINGQIFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             -HHHhCCCCEEEECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence             2446789999999998766555554 889999999999999999854 344566555

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=97.50  E-value=0.0018  Score=47.03  Aligned_cols=98  Identities=18%  Similarity=0.322  Sum_probs=55.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |+|+|.|++|-+|+.+++.+.+ .++++.+...+..+...  .+....+....         ...+.-.++++++++.+|
T Consensus         1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~--g~d~g~~~~~~---------~~~~~v~~~l~~~~~~~D   69 (124)
T PF01113_consen    1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV--GKDVGELAGIG---------PLGVPVTDDLEELLEEAD   69 (124)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT--TSBCHHHCTSS---------T-SSBEBS-HHHHTTH-S
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc--cchhhhhhCcC---------CcccccchhHHHhcccCC
Confidence            5899999999999999999998 57886665444310000  11111111110         011111256788888899


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      ++|.+.        .+         ..+...++.+.+++  .++|.-+|
T Consensus        70 VvIDfT--------~p---------~~~~~~~~~~~~~g--~~~ViGTT   99 (124)
T PF01113_consen   70 VVIDFT--------NP---------DAVYDNLEYALKHG--VPLVIGTT   99 (124)
T ss_dssp             EEEEES---------H---------HHHHHHHHHHHHHT---EEEEE-S
T ss_pred             EEEEcC--------Ch---------HHhHHHHHHHHhCC--CCEEEECC
Confidence            999873        22         23345677777777  45554333

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=97.48  E-value=0.0012  Score=57.08  Aligned_cols=35  Identities=31%  Similarity=0.485  Sum_probs=29.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      +++|+|+||||++|+.|++.|.++.. +++++.++.
T Consensus         3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~   38 (349)
T PRK08664          3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE   38 (349)
T ss_pred             CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence            57999999999999999999987754 888875544

>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms)

Probab=97.48  E-value=0.00085  Score=57.52  Aligned_cols=92  Identities=13%  Similarity=0.127  Sum_probs=54.6

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEE---EEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVT---TTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +|+|.||||++|+.|++.|.+++|.+.   .+.+..        +....+. .    ........|+.     ...++++
T Consensus         1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~--------~~g~~~~-~----~~~~~~~~~~~-----~~~~~~~   62 (339)
T TIGR01296         1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDR--------SAGRKVT-F----KGKELEVNEAK-----IESFEGI   62 (339)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccc--------cCCCeee-e----CCeeEEEEeCC-----hHHhcCC
Confidence            589999999999999999998887644   333543        1111111 1    12344455553     1234689


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      |+||-+++..                 .+..++..+.+.| . ++|=.||..
T Consensus        63 D~v~~a~g~~-----------------~s~~~a~~~~~~G-~-~VID~ss~~   95 (339)
T TIGR01296        63 DIALFSAGGS-----------------VSKEFAPKAAKCG-A-IVIDNTSAF   95 (339)
T ss_pred             CEEEECCCHH-----------------HHHHHHHHHHHCC-C-EEEECCHHH
Confidence            9999877621                 1123344455566 3 677677653

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=97.47  E-value=0.0017  Score=53.57  Aligned_cols=66  Identities=20%  Similarity=0.219  Sum_probs=44.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEe-cCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTV-RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|.|+|++|.+|+.+++.+.+. +.++.++. +++        +.....            -..++...++++++++++
T Consensus         2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~--------~~~~~~------------~~~~i~~~~dl~~ll~~~   61 (257)
T PRK00048          2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPG--------SPLVGQ------------GALGVAITDDLEAVLADA   61 (257)
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCC--------cccccc------------CCCCccccCCHHHhccCC
Confidence            68999999999999999988764 67877654 443        111100            112333345566666678


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||+++.
T Consensus        62 DvVid~t~   69 (257)
T PRK00048         62 DVLIDFTT   69 (257)
T ss_pred             CEEEECCC
Confidence            99998764

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.47  E-value=0.0015  Score=51.79  Aligned_cols=111  Identities=14%  Similarity=0.217  Sum_probs=66.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCC--cccc---------Cccch----hhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD--PEHR---------NSKDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~~---------~~~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      .+++|+|.|+ |.+|+++++.|+..|. ++++++++...  +...         ...+.    ..+.+. ...-+++.+.
T Consensus        20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~~   97 (202)
T TIGR02356        20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL-NSDIQVTALK   97 (202)
T ss_pred             cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh-CCCCEEEEeh
Confidence            3568999997 9999999999999996 88898876310  0000         00111    112221 1122344444


Q ss_pred             cCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ..+. .+.+.++++++|+||.+..       +.         ..-..+.+.+++.+  ..+|+.++..
T Consensus        98 ~~i~-~~~~~~~~~~~D~Vi~~~d-------~~---------~~r~~l~~~~~~~~--ip~i~~~~~g  146 (202)
T TIGR02356        98 ERVT-AENLELLINNVDLVLDCTD-------NF---------ATRYLINDACVALG--TPLISAAVVG  146 (202)
T ss_pred             hcCC-HHHHHHHHhCCCEEEECCC-------CH---------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            4443 3567778889999997642       11         11124556777777  5788877654

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.42  E-value=0.00021  Score=60.61  Aligned_cols=34  Identities=21%  Similarity=0.258  Sum_probs=31.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|.|+| +|.+|+.++..|++.|++|++.+|++
T Consensus         2 ~~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~   35 (308)
T PRK06129          2 MGSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADP   35 (308)
T ss_pred             CcEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCH
Confidence            35899999 59999999999999999999999986

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=97.41  E-value=0.00022  Score=55.59  Aligned_cols=33  Identities=24%  Similarity=0.295  Sum_probs=27.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||.|.|. ||+|..++..|++.|++|++++.++
T Consensus         1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~   33 (185)
T PF03721_consen    1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDE   33 (185)
T ss_dssp             -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H
T ss_pred             CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCCh
Confidence            58999966 9999999999999999999999876

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins

Probab=97.41  E-value=0.00097  Score=56.35  Aligned_cols=112  Identities=12%  Similarity=0.039  Sum_probs=70.3

Q ss_pred             EEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccc-hhhhhcCCCC-CCCEEEEecCCCChhhHHHHhcCCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKD-LSFLKNLPGA-SERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |.|+|| |.+|+.++..|+.+|. +|+++++++.     ..+. ...+.+.... .....+.. . .|   ++ .++++|
T Consensus         1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~-----~~~g~~~dl~~~~~~~~~~~~I~~-t-~d---~~-~l~dAD   68 (300)
T cd01339           1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEG-----LPQGKALDISQAAPILGSDTKVTG-T-ND---YE-DIAGSD   68 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCc-----HHHHHHHHHHHhhhhcCCCeEEEE-c-CC---HH-HhCCCC
Confidence            578999 9999999999988876 9999999861     1100 0111111110 11112111 0 12   33 368999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +||.+++.......... +.+..|+.-.+.+++.+.+..+-..+|.+|
T Consensus        69 iVIit~g~p~~~~~~r~-e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s  115 (300)
T cd01339          69 VVVITAGIPRKPGMSRD-DLLGTNAKIVKEVAENIKKYAPNAIVIVVT  115 (300)
T ss_pred             EEEEecCCCCCcCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence            99999987665444443 677788999999999998887333445444

Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas

>PLN02383 aspartate semialdehyde dehydrogenase

Probab=97.39  E-value=0.0024  Score=54.83  Aligned_cols=27  Identities=22%  Similarity=0.356  Sum_probs=24.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY   30 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~   30 (285)
                      +.++|.|.||||++|+.|++.|.+++|
T Consensus         6 ~~~kVaVvGAtG~vG~eLlrlL~~~~h   32 (344)
T PLN02383          6 NGPSVAIVGVTGAVGQEFLSVLTDRDF   32 (344)
T ss_pred             CCCeEEEEcCCChHHHHHHHHHHhCCC
Confidence            457999999999999999999998776

>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional

Probab=97.38  E-value=0.0015  Score=55.82  Aligned_cols=37  Identities=30%  Similarity=0.317  Sum_probs=29.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHH-cCCe---EEEEec
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLD-HGYS---VTTTVR   37 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~-~g~~---V~~~~r   37 (285)
                      |+.+.++|.|.||||++|+.+++.|.+ ..++   +..+..
T Consensus         1 ~~~~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS   41 (347)
T PRK06728          1 MSEKGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSS   41 (347)
T ss_pred             CCCCCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEEC
Confidence            777778999999999999999999985 4555   444443

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=97.36  E-value=0.0033  Score=49.64  Aligned_cols=114  Identities=16%  Similarity=0.198  Sum_probs=68.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--CccccC----c--c-----c----hhhhhcCCCCCCCEEEE
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHRN----S--K-----D----LSFLKNLPGASERLRIF   66 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~~----~--~-----~----~~~~~~~~~~~~~~~~~   66 (285)
                      ..+|+|.|++| +|+++++.|+..|. ++++++.+..  ++....    .  +     +    ...++++ .+.-+++.+
T Consensus        19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-Np~v~i~~~   96 (198)
T cd01485          19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-NPNVKLSIV   96 (198)
T ss_pred             hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH-CCCCEEEEE
Confidence            46899999965 99999999999996 6888887531  111000    0  0     0    1112222 122345556


Q ss_pred             ecCCCC-hhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeee
Q 023244           67 HADLSH-PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVF  138 (285)
Q Consensus        67 ~~Dl~d-~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~  138 (285)
                      ..++.+ .+...+.++++|+||.+-.       +.         .....+-+.|++.+  .++|+.++.+.++
T Consensus        97 ~~~~~~~~~~~~~~~~~~dvVi~~~d-------~~---------~~~~~ln~~c~~~~--ip~i~~~~~G~~G  151 (198)
T cd01485          97 EEDSLSNDSNIEEYLQKFTLVIATEE-------NY---------ERTAKVNDVCRKHH--IPFISCATYGLIG  151 (198)
T ss_pred             ecccccchhhHHHHHhCCCEEEECCC-------CH---------HHHHHHHHHHHHcC--CCEEEEEeecCEE
Confidence            566653 3456677888999996522       11         11224557788877  5888888766443

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.31  E-value=0.0043  Score=50.18  Aligned_cols=111  Identities=20%  Similarity=0.231  Sum_probs=66.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCC--cccc---------Cccch----hhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD--PEHR---------NSKDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~~~~---------~~~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      ++++|+|.|+ |.+|+++++.|+..|. ++++++.+...  +..+         ...+.    +.+.+. ...-+++.+.
T Consensus        20 ~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~i~~~~   97 (228)
T cd00757          20 KNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI-NPDVEIEAYN   97 (228)
T ss_pred             hCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh-CCCCEEEEec
Confidence            3568999998 9999999999999996 67777654210  0000         00111    111111 1122455555


Q ss_pred             cCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .+++ .+.+.++++++|+||.+..       ++.         .-..+.++|.+.+  ..+|+.+...
T Consensus        98 ~~i~-~~~~~~~~~~~DvVi~~~d-------~~~---------~r~~l~~~~~~~~--ip~i~~g~~g  146 (228)
T cd00757          98 ERLD-AENAEELIAGYDLVLDCTD-------NFA---------TRYLINDACVKLG--KPLVSGAVLG  146 (228)
T ss_pred             ceeC-HHHHHHHHhCCCEEEEcCC-------CHH---------HHHHHHHHHHHcC--CCEEEEEecc
Confidence            5553 4567778889999998744       111         1134667777777  5788876554

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.27  E-value=0.0012  Score=50.59  Aligned_cols=57  Identities=16%  Similarity=0.158  Sum_probs=46.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|+|+|+++.+|..+++.|.++|.+|+++.|+.                                  +++.+.+.++
T Consensus        43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~----------------------------------~~l~~~l~~a   88 (168)
T cd01080          43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT----------------------------------KNLKEHTKQA   88 (168)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc----------------------------------hhHHHHHhhC
Confidence            468999999977889999999999999988888753                                  2456677889


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+||.+.+..+
T Consensus        89 DiVIsat~~~~   99 (168)
T cd01080          89 DIVIVAVGKPG   99 (168)
T ss_pred             CEEEEcCCCCc
Confidence            99998877543

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=97.27  E-value=0.0042  Score=54.93  Aligned_cols=36  Identities=17%  Similarity=0.114  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |.  +|+|.|.|. |++|..++..|++.|++|+++++++
T Consensus         1 m~--~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~   36 (415)
T PRK11064          1 MS--FETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQ   36 (415)
T ss_pred             CC--ccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCH
Confidence            55  478999987 9999999999999999999999987

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=97.27  E-value=0.003  Score=50.41  Aligned_cols=113  Identities=17%  Similarity=0.256  Sum_probs=66.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--CccccC--------ccch----hhhhcCCCCCCCEEEEec
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHRN--------SKDL----SFLKNLPGASERLRIFHA   68 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~   68 (285)
                      ...+|+|.|+ |.+|+.+++.|+..|. ++++++.+..  ++....        ..+.    ..+.++ ...-+++.+..
T Consensus        27 ~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l-np~v~v~~~~~  104 (212)
T PRK08644         27 KKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEI-NPFVEIEAHNE  104 (212)
T ss_pred             hCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHH-CCCCEEEEEee
Confidence            3468999998 9999999999999996 5888887621  111100        0011    111111 11234555555


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceee
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAV  137 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~  137 (285)
                      .+++ +.+.++++++|+||.+.-       ++.         ....+.+.+.+. +  ..+|+.+....+
T Consensus       105 ~i~~-~~~~~~~~~~DvVI~a~D-------~~~---------~r~~l~~~~~~~~~--~p~I~~~~~~~~  155 (212)
T PRK08644        105 KIDE-DNIEELFKDCDIVVEAFD-------NAE---------TKAMLVETVLEHPG--KKLVAASGMAGY  155 (212)
T ss_pred             ecCH-HHHHHHHcCCCEEEECCC-------CHH---------HHHHHHHHHHHhCC--CCEEEeehhhcc
Confidence            5554 456677889999997621       221         122455667666 5  677877654433

>TIGR01771 L-LDH-NAD L-lactate dehydrogenase

Probab=97.27  E-value=0.0067  Score=51.12  Aligned_cols=110  Identities=14%  Similarity=0.102  Sum_probs=71.9

Q ss_pred             EecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCC-CCCEEEEecCCCChhhHHHHhcCCCEE
Q 023244           10 VTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGA-SERLRIFHADLSHPDGFDAAIAGCTGV   86 (285)
Q Consensus        10 VtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~d~v   86 (285)
                      |.|+ |.+|+.++..|+..+.  ++.+++.+..    ........+...... ..++++..   .+    .+.++++|+|
T Consensus         1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~----~~~g~a~Dl~~~~~~~~~~~~i~~---~~----~~~~~daDiv   68 (299)
T TIGR01771         1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKD----KAEGEAMDLQHAASFLPTPKKIRS---GD----YSDCKDADLV   68 (299)
T ss_pred             CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCC----hhhHHHHHHHHhhcccCCCeEEec---CC----HHHHCCCCEE
Confidence            4676 9999999999988764  7888888651    011111112221111 12233332   22    2356789999


Q ss_pred             EEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           87 LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        87 ih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |-.||.......+.. ..++.|+...+.+.+.+++.++-..++.+|
T Consensus        69 Vitag~~rk~g~~R~-dll~~N~~i~~~~~~~i~~~~p~~~vivvs  113 (299)
T TIGR01771        69 VITAGAPQKPGETRL-ELVGRNVRIMKSIVPEVVKSGFDGIFLVAT  113 (299)
T ss_pred             EECCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            999998666545554 889999999999999999987445566555

This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.

>PRK04148 hypothetical protein; Provisional

Probab=97.26  E-value=0.00057  Score=49.77  Aligned_cols=91  Identities=21%  Similarity=0.247  Sum_probs=64.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ++++++.|. | -|..++..|.+.|++|++++.++        ......++.     .+.++..|+.+++-  ++-+++|
T Consensus        17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~--------~aV~~a~~~-----~~~~v~dDlf~p~~--~~y~~a~   79 (134)
T PRK04148         17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINE--------KAVEKAKKL-----GLNAFVDDLFNPNL--EIYKNAK   79 (134)
T ss_pred             CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHh-----CCeEEECcCCCCCH--HHHhcCC
Confidence            478999998 5 89999999999999999999988        444444433     57889999998762  2335788


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV  129 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  129 (285)
                      .|+-.         .|..+.       ...+++.+++.+ ..-+|
T Consensus        80 liysi---------rpp~el-------~~~~~~la~~~~-~~~~i  107 (134)
T PRK04148         80 LIYSI---------RPPRDL-------QPFILELAKKIN-VPLII  107 (134)
T ss_pred             EEEEe---------CCCHHH-------HHHHHHHHHHcC-CCEEE
Confidence            88843         221122       236778888877 54444

>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional

Probab=97.26  E-value=0.0025  Score=53.65  Aligned_cols=34  Identities=18%  Similarity=0.212  Sum_probs=27.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (285)
                      +.+|.|.||||++|..|++.|.++.+ ++..+..+
T Consensus         2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~   36 (313)
T PRK11863          2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA   36 (313)
T ss_pred             CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence            57899999999999999999988753 55555543

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=97.26  E-value=0.00074  Score=62.17  Aligned_cols=70  Identities=17%  Similarity=0.197  Sum_probs=57.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      ..|+|.|+ |-+|+.+++.|.++|++|++++.++        ++.+.+++.     +...+.+|.+|++.++++ ++++|
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~--------~~~~~~~~~-----g~~~i~GD~~~~~~L~~a~i~~a~  483 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSR--------TRVDELRER-----GIRAVLGNAANEEIMQLAHLDCAR  483 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHC-----CCeEEEcCCCCHHHHHhcCccccC
Confidence            46899998 9999999999999999999999987        555555543     688999999999988875 35688


Q ss_pred             EEEEe
Q 023244           85 GVLHV   89 (285)
Q Consensus        85 ~vih~   89 (285)
                      .++-+
T Consensus       484 ~viv~  488 (558)
T PRK10669        484 WLLLT  488 (558)
T ss_pred             EEEEE
Confidence            77643

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=97.26  E-value=0.00098  Score=59.75  Aligned_cols=73  Identities=23%  Similarity=0.321  Sum_probs=57.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      +++|+|+|+ |.+|+.+++.|.+.|++|+++++++        +....+.+.   ..++.++.+|.++.+.+.++ ++++
T Consensus       231 ~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~--------~~~~~~~~~---~~~~~~i~gd~~~~~~L~~~~~~~a  298 (453)
T PRK09496        231 VKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP--------ERAEELAEE---LPNTLVLHGDGTDQELLEEEGIDEA  298 (453)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHHH---CCCCeEEECCCCCHHHHHhcCCccC
Confidence            578999999 9999999999999999999999987        444433332   12567889999999888665 3568


Q ss_pred             CEEEEe
Q 023244           84 TGVLHV   89 (285)
Q Consensus        84 d~vih~   89 (285)
                      |+||-+
T Consensus       299 ~~vi~~  304 (453)
T PRK09496        299 DAFIAL  304 (453)
T ss_pred             CEEEEC
Confidence            988844

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=97.22  E-value=0.0044  Score=46.17  Aligned_cols=108  Identities=17%  Similarity=0.202  Sum_probs=65.2

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCcc-------c----cCccchh----hhhcCCCCCCCEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE-------H----RNSKDLS----FLKNLPGASERLRIFHADL   70 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~----~~~~~~~----~~~~~~~~~~~~~~~~~Dl   70 (285)
                      +|+|.|+ |.+|+++++.|+..|. ++++++.+.....       .    -...+..    .+.++. +.-+++.+..++
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~-p~v~i~~~~~~~   78 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELN-PGVNVTAVPEGI   78 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHC-CCcEEEEEeeec
Confidence            5899998 9999999999999997 6888876531100       0    0011111    111111 122444455555


Q ss_pred             CChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           71 SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        71 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .+.. ..+.++++|+||.+...                ......+.++|++.+  ..+|..++..
T Consensus        79 ~~~~-~~~~~~~~diVi~~~d~----------------~~~~~~l~~~~~~~~--i~~i~~~~~g  124 (143)
T cd01483          79 SEDN-LDDFLDGVDLVIDAIDN----------------IAVRRALNRACKELG--IPVIDAGGLG  124 (143)
T ss_pred             Chhh-HHHHhcCCCEEEECCCC----------------HHHHHHHHHHHHHcC--CCEEEEcCCC
Confidence            4433 35667889999976441                122345667888877  6788877764

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK08040 putative semialdehyde dehydrogenase; Provisional

Probab=97.21  E-value=0.0028  Score=54.08  Aligned_cols=36  Identities=17%  Similarity=0.272  Sum_probs=28.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC---eEEEEec
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVR   37 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r   37 (285)
                      |+ .+++|.|.||||++|+.|++.|.++.|   ++..+..
T Consensus         1 ~~-~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS   39 (336)
T PRK08040          1 MS-EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS   39 (336)
T ss_pred             CC-CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence            54 467999999999999999999988543   5665644

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.20  E-value=0.0024  Score=52.95  Aligned_cols=101  Identities=18%  Similarity=0.164  Sum_probs=69.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +++++.|+|+.| +|+--++--.+-|++|++++++.       .++.+.++.+     ..+.+..-..|++.+.++.+..
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~-------~kkeea~~~L-----GAd~fv~~~~d~d~~~~~~~~~  247 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSS-------KKKEEAIKSL-----GADVFVDSTEDPDIMKAIMKTT  247 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCc-------hhHHHHHHhc-----CcceeEEecCCHHHHHHHHHhh
Confidence            578999999988 99877776667799999999986       2455556656     4455554455888888888777


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      |.++|.+.....   .+.           ..++++++..|   ++|+++-.
T Consensus       248 dg~~~~v~~~a~---~~~-----------~~~~~~lk~~G---t~V~vg~p  281 (360)
T KOG0023|consen  248 DGGIDTVSNLAE---HAL-----------EPLLGLLKVNG---TLVLVGLP  281 (360)
T ss_pred             cCcceeeeeccc---cch-----------HHHHHHhhcCC---EEEEEeCc
Confidence            777776653311   111           24456666655   89988754

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.19  E-value=0.0039  Score=55.81  Aligned_cols=80  Identities=13%  Similarity=0.006  Sum_probs=51.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+|+|+|||++| +|...++.|++.|++|++.+++..    ........+.+.     ++.+..++.  ...   .+
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~----~~~~~~~~l~~~-----g~~~~~~~~--~~~---~~   65 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPF----SENPEAQELLEE-----GIKVICGSH--PLE---LL   65 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCc----cchhHHHHHHhc-----CCEEEeCCC--CHH---Hh
Confidence            565678999999977 999999999999999999987651    001111223222     344443321  111   12


Q ss_pred             c-CCCEEEEecccCCC
Q 023244           81 A-GCTGVLHVATPVDF   95 (285)
Q Consensus        81 ~-~~d~vih~a~~~~~   95 (285)
                      . .+|.||...|+...
T Consensus        66 ~~~~d~vV~s~gi~~~   81 (447)
T PRK02472         66 DEDFDLMVKNPGIPYT   81 (447)
T ss_pred             cCcCCEEEECCCCCCC
Confidence            3 48999999986543

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.18  E-value=0.00069  Score=51.17  Aligned_cols=75  Identities=12%  Similarity=0.064  Sum_probs=49.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..++++|+|+ |.+|+.+++.|.+.| ++|++.+|+.        +....+ ....     ...+..+..+   ..+.++
T Consensus        18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~--------~~~~~~~~~~~-----~~~~~~~~~~---~~~~~~   80 (155)
T cd01065          18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTL--------EKAKALAERFG-----ELGIAIAYLD---LEELLA   80 (155)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH--------HHHHHHHHHHh-----hcccceeecc---hhhccc
Confidence            3578999998 999999999999985 7899999876        332222 2221     1001123333   334467


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      ++|+||.+......
T Consensus        81 ~~Dvvi~~~~~~~~   94 (155)
T cd01065          81 EADLIINTTPVGMK   94 (155)
T ss_pred             cCCEEEeCcCCCCC
Confidence            89999999876543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK08328 hypothetical protein; Provisional

Probab=97.18  E-value=0.0098  Score=48.17  Aligned_cols=112  Identities=17%  Similarity=0.173  Sum_probs=66.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCc--ccc---------Cc-cch----hhhhcCCCCCCCEEEEe
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP--EHR---------NS-KDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~---------~~-~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      +.+|+|.|+ |.+|+++++.|+..|. ++++++.+....  ...         .. ++.    ..+.+. ...-++..+.
T Consensus        27 ~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~-np~v~v~~~~  104 (231)
T PRK08328         27 KAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERF-NSDIKIETFV  104 (231)
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHh-CCCCEEEEEe
Confidence            468999998 9999999999999996 688887643110  000         00 011    111211 1223455555


Q ss_pred             cCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceee
Q 023244           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  137 (285)
                      ..++ .+.+.+++++.|+||.+..       +..         .-..+-++|++.+  .++|+.++...+
T Consensus       105 ~~~~-~~~~~~~l~~~D~Vid~~d-------~~~---------~r~~l~~~~~~~~--ip~i~g~~~g~~  155 (231)
T PRK08328        105 GRLS-EENIDEVLKGVDVIVDCLD-------NFE---------TRYLLDDYAHKKG--IPLVHGAVEGTY  155 (231)
T ss_pred             ccCC-HHHHHHHHhcCCEEEECCC-------CHH---------HHHHHHHHHHHcC--CCEEEEeeccCE
Confidence            5553 4557778889999997643       111         1123456677777  678877766543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=97.17  E-value=0.0037  Score=54.46  Aligned_cols=35  Identities=23%  Similarity=0.359  Sum_probs=32.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +++|.|.||+|.+|+.++..|.+.|++|++.+|+.
T Consensus        98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~  132 (374)
T PRK11199         98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD  132 (374)
T ss_pred             cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence            47899999999999999999999999999999854

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=97.16  E-value=0.0031  Score=58.46  Aligned_cols=71  Identities=14%  Similarity=0.224  Sum_probs=58.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      ++.|+|.|. |-+|+.+++.|.++|++++++++++        +..+.+.+.     +...+.+|.+|++.++++ ++++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~-----g~~v~~GDat~~~~L~~agi~~A  465 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDI--------SAVNLMRKY-----GYKVYYGDATQLELLRAAGAEKA  465 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhC-----CCeEEEeeCCCHHHHHhcCCccC
Confidence            357999987 9999999999999999999999988        555555443     677899999999988876 4678


Q ss_pred             CEEEEe
Q 023244           84 TGVLHV   89 (285)
Q Consensus        84 d~vih~   89 (285)
                      |.+|-+
T Consensus       466 ~~vv~~  471 (601)
T PRK03659        466 EAIVIT  471 (601)
T ss_pred             CEEEEE
Confidence            888855

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.15  E-value=0.0016  Score=54.16  Aligned_cols=54  Identities=13%  Similarity=0.169  Sum_probs=44.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|++|.+|+.++..|+++|..|+++.|+.                                  ..+.+.++++
T Consensus       158 ~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t----------------------------------~~L~~~~~~a  203 (283)
T PRK14192        158 AGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT----------------------------------QNLPELVKQA  203 (283)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc----------------------------------hhHHHHhccC
Confidence            478999999999999999999999999888887744                                  1244555789


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||++.|
T Consensus       204 DIvI~AtG  211 (283)
T PRK14192        204 DIIVGAVG  211 (283)
T ss_pred             CEEEEccC
Confidence            99999886

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=97.15  E-value=0.005  Score=50.12  Aligned_cols=110  Identities=15%  Similarity=0.124  Sum_probs=64.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccC-----------ccch----hhhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRN-----------SKDL----SFLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-----------~~~~----~~~~~~~~~~~~~~~~~~   68 (285)
                      ..+|+|.|+ |.+|+.+++.|+..|. ++++++++.....--+           ..+.    ..+.++ ...-+++.+..
T Consensus        24 ~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i-np~v~i~~~~~  101 (240)
T TIGR02355        24 ASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQI-NPHIAINPINA  101 (240)
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHH-CCCcEEEEEec
Confidence            468999998 9999999999999985 7888887542110000           0111    111111 11223444444


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .++ .+.+.++++++|+||.+..       ++         .....+-++|.+.+  .++|+-++..
T Consensus       102 ~i~-~~~~~~~~~~~DlVvd~~D-------~~---------~~r~~ln~~~~~~~--ip~v~~~~~g  149 (240)
T TIGR02355       102 KLD-DAELAALIAEHDIVVDCTD-------NV---------EVRNQLNRQCFAAK--VPLVSGAAIR  149 (240)
T ss_pred             cCC-HHHHHHHhhcCCEEEEcCC-------CH---------HHHHHHHHHHHHcC--CCEEEEEecc
Confidence            443 3557778889999997633       11         11234567777777  6788765543

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.14  E-value=0.0014  Score=54.90  Aligned_cols=69  Identities=20%  Similarity=0.183  Sum_probs=50.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++++|+|. |.+|+.+++.|...|.+|++.+|+.        +......+.     ....+     +.+.+.+.++++
T Consensus       150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~--------~~~~~~~~~-----g~~~~-----~~~~l~~~l~~a  210 (287)
T TIGR02853       150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS--------ADLARITEM-----GLIPF-----PLNKLEEKVAEI  210 (287)
T ss_pred             CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCeee-----cHHHHHHHhccC
Confidence            4689999999 8899999999999999999999987        222222222     11111     234567778899


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||++..
T Consensus       211 DiVint~P  218 (287)
T TIGR02853       211 DIVINTIP  218 (287)
T ss_pred             CEEEECCC
Confidence            99999753

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.12  E-value=0.0011  Score=55.44  Aligned_cols=76  Identities=24%  Similarity=0.283  Sum_probs=50.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+++++|+|+ |.+|+.++..|...| .+|++++|+.        ++...+.+.-.....+.+   +.    ...+.+.+
T Consensus       122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~--------~~a~~l~~~~~~~~~~~~---~~----~~~~~~~~  185 (278)
T PRK00258        122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV--------ERAEELAKLFGALGKAEL---DL----ELQEELAD  185 (278)
T ss_pred             CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhhhccceee---cc----cchhcccc
Confidence            4578999998 999999999999999 7899999987        333333221110001121   11    22345567


Q ss_pred             CCEEEEecccCCC
Q 023244           83 CTGVLHVATPVDF   95 (285)
Q Consensus        83 ~d~vih~a~~~~~   95 (285)
                      +|+||++......
T Consensus       186 ~DivInaTp~g~~  198 (278)
T PRK00258        186 FDLIINATSAGMS  198 (278)
T ss_pred             CCEEEECCcCCCC
Confidence            9999998865443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.07  E-value=0.0011  Score=55.52  Aligned_cols=38  Identities=24%  Similarity=0.251  Sum_probs=34.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+...++|.|.|+ |.+|+.++..|+..|++|++.++++
T Consensus         1 ~~~~~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~   38 (286)
T PRK07819          1 MSDAIQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTE   38 (286)
T ss_pred             CCCCccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCH
Confidence            5655678999998 9999999999999999999999987

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=97.07  E-value=0.0073  Score=47.70  Aligned_cols=83  Identities=11%  Similarity=0.151  Sum_probs=52.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC--CCccccC--------ccch----hhhhcCCCCCCCEEEEec
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE--LDPEHRN--------SKDL----SFLKNLPGASERLRIFHA   68 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~~~   68 (285)
                      +.++|+|.|+ |.+|+.++..|+..|. ++++++++.  +++..+.        ..+.    ..+.++ ...-++..+..
T Consensus        20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~i-np~~~i~~~~~   97 (200)
T TIGR02354        20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEI-NPYTEIEAYDE   97 (200)
T ss_pred             hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEeee
Confidence            3578999999 8899999999999998 699998871  0011100        0011    111111 11234555556


Q ss_pred             CCCChhhHHHHhcCCCEEEEe
Q 023244           69 DLSHPDGFDAAIAGCTGVLHV   89 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~   89 (285)
                      +++ .+.+.++++++|+||-+
T Consensus        98 ~i~-~~~~~~~~~~~DlVi~a  117 (200)
T TIGR02354        98 KIT-EENIDKFFKDADIVCEA  117 (200)
T ss_pred             eCC-HhHHHHHhcCCCEEEEC
Confidence            664 35677888899999976

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=97.07  E-value=0.01  Score=46.80  Aligned_cols=112  Identities=17%  Similarity=0.174  Sum_probs=66.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccC-----------ccc----hhhhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRN-----------SKD----LSFLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~   68 (285)
                      .++|+|.|++| +|+++++.|+..|. ++++++.+......-+           ..+    .+.+.++ ++.-+++.+..
T Consensus        21 ~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l-Np~v~i~~~~~   98 (197)
T cd01492          21 SARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL-NPRVKVSVDTD   98 (197)
T ss_pred             hCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH-CCCCEEEEEec
Confidence            46899999855 99999999999996 6888886532110000           001    1112222 12234555555


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeee
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVF  138 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~  138 (285)
                      .+++  ...+.++++|+||.+..       +. ..        -..+-+.|++.+  .++|+.++..-++
T Consensus        99 ~~~~--~~~~~~~~~dvVi~~~~-------~~-~~--------~~~ln~~c~~~~--ip~i~~~~~G~~G  148 (197)
T cd01492          99 DISE--KPEEFFSQFDVVVATEL-------SR-AE--------LVKINELCRKLG--VKFYATGVHGLFG  148 (197)
T ss_pred             Cccc--cHHHHHhCCCEEEECCC-------CH-HH--------HHHHHHHHHHcC--CCEEEEEecCCEE
Confidence            5552  34566788999996532       11 11        234557788887  4788888765443

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed

Probab=97.04  E-value=0.0026  Score=55.50  Aligned_cols=67  Identities=15%  Similarity=0.202  Sum_probs=51.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||+|+|.|+ |.+|+.++..+.+.|++|++++.++.       ......        .-.++.+|..|.+.+.++++.+|
T Consensus         2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~-------~pa~~~--------ad~~~~~~~~D~~~l~~~a~~~d   65 (372)
T PRK06019          2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPD-------SPAAQV--------ADEVIVADYDDVAALRELAEQCD   65 (372)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCC-------CchhHh--------CceEEecCCCCHHHHHHHHhcCC
Confidence            468999999 89999999999999999999988761       001111        11345688999999999999999


Q ss_pred             EEE
Q 023244           85 GVL   87 (285)
Q Consensus        85 ~vi   87 (285)
                      +|.
T Consensus        66 vit   68 (372)
T PRK06019         66 VIT   68 (372)
T ss_pred             EEE
Confidence            875

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.04  E-value=0.0021  Score=54.09  Aligned_cols=68  Identities=21%  Similarity=0.205  Sum_probs=50.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++++|+|+ |.+|+.++..|...|.+|++.+|++        +........     ..+++     +.+.+.+.++++
T Consensus       151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~--------~~~~~~~~~-----G~~~~-----~~~~l~~~l~~a  211 (296)
T PRK08306        151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKS--------AHLARITEM-----GLSPF-----HLSELAEEVGKI  211 (296)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHc-----CCeee-----cHHHHHHHhCCC
Confidence            3689999998 8899999999999999999999987        333333333     22222     234567778899


Q ss_pred             CEEEEec
Q 023244           84 TGVLHVA   90 (285)
Q Consensus        84 d~vih~a   90 (285)
                      |+||++.
T Consensus       212 DiVI~t~  218 (296)
T PRK08306        212 DIIFNTI  218 (296)
T ss_pred             CEEEECC
Confidence            9999975

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.98  E-value=0.0029  Score=55.04  Aligned_cols=74  Identities=19%  Similarity=0.168  Sum_probs=54.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      .++|+|+|+ |-+|...++.|...|.+|++++|+.        ++...+.....   .  .+..+..+.+.+.+.+.++|
T Consensus       167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~--------~~~~~l~~~~g---~--~v~~~~~~~~~l~~~l~~aD  232 (370)
T TIGR00518       167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI--------DRLRQLDAEFG---G--RIHTRYSNAYEIEDAVKRAD  232 (370)
T ss_pred             CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH--------HHHHHHHHhcC---c--eeEeccCCHHHHHHHHccCC
Confidence            467999988 9999999999999999999999876        33333322110   1  12345566778888889999


Q ss_pred             EEEEeccc
Q 023244           85 GVLHVATP   92 (285)
Q Consensus        85 ~vih~a~~   92 (285)
                      +||+++..
T Consensus       233 vVI~a~~~  240 (370)
T TIGR00518       233 LLIGAVLI  240 (370)
T ss_pred             EEEEcccc
Confidence            99998754

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=96.97  E-value=0.0055  Score=54.23  Aligned_cols=33  Identities=27%  Similarity=0.286  Sum_probs=30.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|.|. |++|..++..|++.|++|+++++++
T Consensus         1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~   33 (411)
T TIGR03026         1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQ   33 (411)
T ss_pred             CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCH
Confidence            47999987 9999999999999999999999987

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.97  E-value=0.00099  Score=56.48  Aligned_cols=34  Identities=26%  Similarity=0.319  Sum_probs=31.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .++|.|.|+ |.+|+.++..|+..|++|++.++++
T Consensus         7 i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~   40 (321)
T PRK07066          7 IKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAP   40 (321)
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            368999988 9999999999999999999999986

>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.96  E-value=0.002  Score=54.18  Aligned_cols=35  Identities=17%  Similarity=0.181  Sum_probs=28.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (285)
                      +|+||.|.|||||.|.+|.+.|+.+. .++..++.+
T Consensus         1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~   36 (349)
T COG0002           1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSR   36 (349)
T ss_pred             CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeech
Confidence            36799999999999999999999874 476655543

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.96  E-value=0.0068  Score=52.07  Aligned_cols=36  Identities=17%  Similarity=0.128  Sum_probs=32.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~  186 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSD  186 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            357899999999999999988888899999988876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.96  E-value=0.0028  Score=48.40  Aligned_cols=65  Identities=22%  Similarity=0.168  Sum_probs=46.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||+|.+.|- |-+|+.+++.|++.|++|++.+|++        ++...+.+.     .++       -.++..++++++|
T Consensus         1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~--------~~~~~~~~~-----g~~-------~~~s~~e~~~~~d   59 (163)
T PF03446_consen    1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSP--------EKAEALAEA-----GAE-------VADSPAEAAEQAD   59 (163)
T ss_dssp             -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH--------HHHHHHHHT-----TEE-------EESSHHHHHHHBS
T ss_pred             CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccch--------hhhhhhHHh-----hhh-------hhhhhhhHhhccc
Confidence            468999988 9999999999999999999999987        455444433     211       1234666777789


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      +|+-+-
T Consensus        60 vvi~~v   65 (163)
T PF03446_consen   60 VVILCV   65 (163)
T ss_dssp             EEEE-S
T ss_pred             ceEeec
Confidence            988653

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=96.94  E-value=0.0026  Score=49.79  Aligned_cols=66  Identities=24%  Similarity=0.138  Sum_probs=42.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |++.| ||+|.||+.|++.|.+.||+|++..|+.+       +......+...  +.        -...+..++.+.+|+
T Consensus         2 ~~~~i-~GtGniG~alA~~~a~ag~eV~igs~r~~-------~~~~a~a~~l~--~~--------i~~~~~~dA~~~aDV   63 (211)
T COG2085           2 MIIAI-IGTGNIGSALALRLAKAGHEVIIGSSRGP-------KALAAAAAALG--PL--------ITGGSNEDAAALADV   63 (211)
T ss_pred             cEEEE-eccChHHHHHHHHHHhCCCeEEEecCCCh-------hHHHHHHHhhc--cc--------cccCChHHHHhcCCE
Confidence            44555 55699999999999999999999977662       22222222111  11        122345556678899


Q ss_pred             EEEe
Q 023244           86 VLHV   89 (285)
Q Consensus        86 vih~   89 (285)
                      ||-.
T Consensus        64 VvLA   67 (211)
T COG2085          64 VVLA   67 (211)
T ss_pred             EEEe
Confidence            9864

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.94  E-value=0.018  Score=51.62  Aligned_cols=121  Identities=17%  Similarity=0.132  Sum_probs=72.3

Q ss_pred             EecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCEEEEe
Q 023244           10 VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTGVLHV   89 (285)
Q Consensus        10 VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~   89 (285)
                      |+||+|.+|..+++.|...|.+|++..+..        .+..     +....++.-+..|.+..+..+++.         
T Consensus        43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~--------~~~~-----~~~~~~~~~~~~d~~~~~~~~~l~---------  100 (450)
T PRK08261         43 LVGGAGRLAEALAALLAGLGYDVVANNDGG--------LTWA-----AGWGDRFGALVFDATGITDPADLK---------  100 (450)
T ss_pred             EEccCchhHHHHHHHHhhCCCeeeecCccc--------cccc-----cCcCCcccEEEEECCCCCCHHHHH---------
Confidence            888899999999999999999999876655        1110     001113332333443332222111         


Q ss_pred             cccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhH
Q 023244           90 ATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYA  169 (285)
Q Consensus        90 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~  169 (285)
                                   ..    .......++.+.+   ..+||+++|......                         ...|+
T Consensus       101 -------------~~----~~~~~~~l~~l~~---~griv~i~s~~~~~~-------------------------~~~~~  135 (450)
T PRK08261        101 -------------AL----YEFFHPVLRSLAP---CGRVVVLGRPPEAAA-------------------------DPAAA  135 (450)
T ss_pred             -------------HH----HHHHHHHHHhccC---CCEEEEEccccccCC-------------------------chHHH
Confidence                         00    1112222333322   359999998754211                         12499


Q ss_pred             hhHHHHHHHHHHHHHHc--CCcEEEeccCc
Q 023244          170 ISKTLTERAALEFAEEH--GLDLVTLIPSM  197 (285)
Q Consensus       170 ~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~  197 (285)
                      .+|...+.+++.++++.  ++++..+.|+.
T Consensus       136 ~akaal~gl~rsla~E~~~gi~v~~i~~~~  165 (450)
T PRK08261        136 AAQRALEGFTRSLGKELRRGATAQLVYVAP  165 (450)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCEEEEEecCC
Confidence            99999999998888774  67887777754

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.94  E-value=0.0097  Score=51.97  Aligned_cols=110  Identities=18%  Similarity=0.232  Sum_probs=65.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc---------Cccchh----hhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR---------NSKDLS----FLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~---------~~~~~~----~~~~~~~~~~~~~~~~~   68 (285)
                      .++|+|.|+ |.+|+++++.|+..|. ++++++++..  ++...         ...+..    .+.+.. ..-++..+..
T Consensus       135 ~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~v~v~~~~~  212 (376)
T PRK08762        135 EARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALN-PDVQVEAVQE  212 (376)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHC-CCCEEEEEec
Confidence            468999988 8899999999999997 7888887621  00000         011111    122221 1123444444


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .+++ +.+.++++++|+||++..       +..         .-..+.++|.+.+  ..+|+.+...
T Consensus       213 ~~~~-~~~~~~~~~~D~Vv~~~d-------~~~---------~r~~ln~~~~~~~--ip~i~~~~~g  260 (376)
T PRK08762        213 RVTS-DNVEALLQDVDVVVDGAD-------NFP---------TRYLLNDACVKLG--KPLVYGAVFR  260 (376)
T ss_pred             cCCh-HHHHHHHhCCCEEEECCC-------CHH---------HHHHHHHHHHHcC--CCEEEEEecc
Confidence            4443 456777889999998743       111         1123567777777  6888876543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.93  E-value=0.0024  Score=56.84  Aligned_cols=34  Identities=29%  Similarity=0.586  Sum_probs=31.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|+||+|.+|+.+++.|.+.|++|++++|++
T Consensus         1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~   34 (437)
T PRK08655          1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP   34 (437)
T ss_pred             CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence            4799999999999999999999999999999976

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.93  E-value=0.0025  Score=53.03  Aligned_cols=34  Identities=26%  Similarity=0.307  Sum_probs=31.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+++|+|+ |.+|+.++..|++.|++|++++|+.
T Consensus       117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~  150 (270)
T TIGR00507       117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV  150 (270)
T ss_pred             CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence            578999998 8999999999999999999999876

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.93  E-value=0.0076  Score=51.36  Aligned_cols=35  Identities=29%  Similarity=0.222  Sum_probs=32.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +.+++|+||+|.+|..+++.+...|.+|+++.+++
T Consensus       163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~  197 (332)
T cd08259         163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP  197 (332)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence            56899999999999999999999999999998876

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.93  E-value=0.004  Score=51.64  Aligned_cols=57  Identities=12%  Similarity=0.095  Sum_probs=47.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|+|+++.+|+.++..|.++|..|+++.++.                                  ..+.+.++++
T Consensus       157 ~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t----------------------------------~~l~~~~~~A  202 (286)
T PRK14175        157 EGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS----------------------------------KDMASYLKDA  202 (286)
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------------hhHHHHHhhC
Confidence            578999999999999999999999999999887643                                  1366677899


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+||...+...
T Consensus       203 DIVIsAvg~p~  213 (286)
T PRK14175        203 DVIVSAVGKPG  213 (286)
T ss_pred             CEEEECCCCCc
Confidence            99999888644

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.92  E-value=0.0049  Score=53.00  Aligned_cols=77  Identities=21%  Similarity=0.154  Sum_probs=52.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .++.|||.||+|.+|++.++-+...|..+++..++.        +..+..+.+..      -...|..+++-.+++.+  
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~--------e~~~l~k~lGA------d~vvdy~~~~~~e~~kk~~  222 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSK--------EKLELVKKLGA------DEVVDYKDENVVELIKKYT  222 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEccc--------chHHHHHHcCC------cEeecCCCHHHHHHHHhhc
Confidence            467999999999999999988888884444455544        45555555521      12356667555555444  


Q ss_pred             --CCCEEEEecccCC
Q 023244           82 --GCTGVLHVATPVD   94 (285)
Q Consensus        82 --~~d~vih~a~~~~   94 (285)
                        ++|+|++|++...
T Consensus       223 ~~~~DvVlD~vg~~~  237 (347)
T KOG1198|consen  223 GKGVDVVLDCVGGST  237 (347)
T ss_pred             CCCccEEEECCCCCc
Confidence              4899999998643

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.92  E-value=0.025  Score=46.68  Aligned_cols=111  Identities=17%  Similarity=0.330  Sum_probs=64.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCc-----------cch----hhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNS-----------KDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      +..+|+|.|+ |.+|+++++.|+..| -++++++.+.....--+.           .+.    ..+.+. +...++..+.
T Consensus        29 ~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I-NP~~~V~~i~  106 (268)
T PRK15116         29 ADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQI-NPECRVTVVD  106 (268)
T ss_pred             cCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhH-CCCcEEEEEe
Confidence            3568999998 999999999999999 578888875311110110           011    111111 1122344442


Q ss_pred             cCCCChhhHHHHhc-CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           68 ADLSHPDGFDAAIA-GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                       +..+++...+++. ++|+||.+...                +..-..|.++|++.+  .++|.+++++
T Consensus       107 -~~i~~e~~~~ll~~~~D~VIdaiD~----------------~~~k~~L~~~c~~~~--ip~I~~gGag  156 (268)
T PRK15116        107 -DFITPDNVAEYMSAGFSYVIDAIDS----------------VRPKAALIAYCRRNK--IPLVTTGGAG  156 (268)
T ss_pred             -cccChhhHHHHhcCCCCEEEEcCCC----------------HHHHHHHHHHHHHcC--CCEEEECCcc
Confidence             2334556666664 68999976441                112235778888877  5777665544

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=96.91  E-value=0.0074  Score=54.11  Aligned_cols=81  Identities=11%  Similarity=0.089  Sum_probs=49.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEEE----ec-CCCChhh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIF----HA-DLSHPDG   75 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~----~~-Dl~d~~~   75 (285)
                      +|+|.|.|+ |++|..++..|++.|  ++|++++.++        ++...+..-..  ..+...-+    .+ .++-..+
T Consensus         1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~--------~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~   71 (473)
T PLN02353          1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISV--------PRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTD   71 (473)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCH--------HHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcC
Confidence            368999977 999999999999884  7899999877        34433322110  00010000    00 0111123


Q ss_pred             HHHHhcCCCEEEEecccCC
Q 023244           76 FDAAIAGCTGVLHVATPVD   94 (285)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~   94 (285)
                      +.+.++++|++|-+.+...
T Consensus        72 ~~~~i~~advi~I~V~TP~   90 (473)
T PLN02353         72 VEKHVAEADIVFVSVNTPT   90 (473)
T ss_pred             HHHHHhcCCEEEEEeCCCC
Confidence            4556678999998887544

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.91  E-value=0.0091  Score=46.09  Aligned_cols=80  Identities=13%  Similarity=0.265  Sum_probs=49.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc--------Cccch----hhhhcCCCCCCCEEEEecCCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR--------NSKDL----SFLKNLPGASERLRIFHADLS   71 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~--------~~~~~----~~~~~~~~~~~~~~~~~~Dl~   71 (285)
                      +|+|.|+ |.+|+.+++.|+..|. ++++++.+..  ++..+        ...+.    ..+.++ ...-+++.+...++
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-np~v~i~~~~~~~~   78 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-NPFVKIEAINIKID   78 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-CCCCEEEEEEeecC
Confidence            5899998 9999999999999997 5888887641  00000        00111    111111 11234555555554


Q ss_pred             ChhhHHHHhcCCCEEEEe
Q 023244           72 HPDGFDAAIAGCTGVLHV   89 (285)
Q Consensus        72 d~~~~~~~~~~~d~vih~   89 (285)
                      . +.+.++++++|+||.+
T Consensus        79 ~-~~~~~~l~~~DlVi~~   95 (174)
T cd01487          79 E-NNLEGLFGDCDIVVEA   95 (174)
T ss_pred             h-hhHHHHhcCCCEEEEC
Confidence            4 5577788899999976

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=96.91  E-value=0.0081  Score=51.52  Aligned_cols=81  Identities=15%  Similarity=0.158  Sum_probs=53.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEE-EecC-----CCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRI-FHAD-----LSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~D-----l~d~~~~~   77 (285)
                      |||.|.|. ||+|....-.|++.||+|++++.++        ++...+..-..  -.+.++- ++-+     ++=-.+++
T Consensus         1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~--------~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~   71 (414)
T COG1004           1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDE--------SKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYE   71 (414)
T ss_pred             CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCH--------HHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHH
Confidence            57999976 9999999999999999999999887        55554443211  0111110 1111     21123566


Q ss_pred             HHhcCCCEEEEecccCCC
Q 023244           78 AAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~   95 (285)
                      +.+++.|++|-+.|....
T Consensus        72 ~a~~~adv~fIavgTP~~   89 (414)
T COG1004          72 EAVKDADVVFIAVGTPPD   89 (414)
T ss_pred             HHHhcCCEEEEEcCCCCC
Confidence            777789999988876554

>PRK08223 hypothetical protein; Validated

Probab=96.91  E-value=0.01  Score=49.33  Aligned_cols=112  Identities=13%  Similarity=0.199  Sum_probs=66.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc-----C----ccch----hhhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR-----N----SKDL----SFLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~-----~----~~~~----~~~~~~~~~~~~~~~~~~   68 (285)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+..  ++...     .    ..+.    ..+.++ +..-+++.+..
T Consensus        27 ~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i-NP~v~V~~~~~  104 (287)
T PRK08223         27 NSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI-NPELEIRAFPE  104 (287)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH-CCCCEEEEEec
Confidence            468999999 9999999999999986 6778876531  11100     0    0111    111121 12234555555


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .++ .+...++++++|+||.+.-       +.       ++..-..+-++|.+.+  ..+|+.|...
T Consensus       105 ~l~-~~n~~~ll~~~DlVvD~~D-------~~-------~~~~r~~ln~~c~~~~--iP~V~~~~~g  154 (287)
T PRK08223        105 GIG-KENADAFLDGVDVYVDGLD-------FF-------EFDARRLVFAACQQRG--IPALTAAPLG  154 (287)
T ss_pred             ccC-ccCHHHHHhCCCEEEECCC-------CC-------cHHHHHHHHHHHHHcC--CCEEEEeccC
Confidence            555 3457778889999985421       11       0112235667788887  6888875543

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.89  E-value=0.0075  Score=51.49  Aligned_cols=74  Identities=18%  Similarity=0.222  Sum_probs=48.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hh-HHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DG-FDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~-~~~~   79 (285)
                      .+.+|||+||+|.+|..+++.+...|.+|++++++.        ++...+.++.     +.. ..|..+.   .+ +..+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~--------~~~~~~~~lG-----a~~-vi~~~~~~~~~~~~~~~  203 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSD--------EKVAYLKKLG-----FDV-AFNYKTVKSLEETLKKA  203 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC-----CCE-EEeccccccHHHHHHHh
Confidence            356899999999999999888878899999988876        5555555542     111 1222222   22 2222


Q ss_pred             h-cCCCEEEEecc
Q 023244           80 I-AGCTGVLHVAT   91 (285)
Q Consensus        80 ~-~~~d~vih~a~   91 (285)
                      . .++|+|+.+.|
T Consensus       204 ~~~gvdvv~d~~G  216 (325)
T TIGR02825       204 SPDGYDCYFDNVG  216 (325)
T ss_pred             CCCCeEEEEECCC
Confidence            2 24899998766

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=96.88  E-value=0.022  Score=46.60  Aligned_cols=110  Identities=20%  Similarity=0.212  Sum_probs=66.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc---------Cccch----hhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR---------NSKDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      ..++|+|.|+ |.+|+++++.|+..|. ++++++.+..  ++...         ...+.    ..+.++ ...-+++.+.
T Consensus        31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l-np~v~i~~~~  108 (245)
T PRK05690         31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI-NPHIAIETIN  108 (245)
T ss_pred             cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH-CCCCEEEEEe
Confidence            3578999999 9999999999999985 7888876431  01000         00111    112222 1123455555


Q ss_pred             cCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      ..++ .+.+.++++++|+||.+..       ++         ..-..+.+++.+.+  ..+|+.++.
T Consensus       109 ~~i~-~~~~~~~~~~~DiVi~~~D-------~~---------~~r~~ln~~~~~~~--ip~v~~~~~  156 (245)
T PRK05690        109 ARLD-DDELAALIAGHDLVLDCTD-------NV---------ATRNQLNRACFAAK--KPLVSGAAI  156 (245)
T ss_pred             ccCC-HHHHHHHHhcCCEEEecCC-------CH---------HHHHHHHHHHHHhC--CEEEEeeec
Confidence            5554 3456778889999998742       11         11124566777777  678875543

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=96.88  E-value=0.0047  Score=54.34  Aligned_cols=71  Identities=17%  Similarity=0.136  Sum_probs=52.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+|+|+|+ |.+|+.++..+.+.|++|++++.++.        .....  .     .-.++..|..|.+.+.++++  
T Consensus        11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~~--------~~~~~--~-----ad~~~~~~~~d~~~l~~~~~~~   74 (395)
T PRK09288         11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYAN--------APAMQ--V-----AHRSHVIDMLDGDALRAVIERE   74 (395)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC--------CchHH--h-----hhheEECCCCCHHHHHHHHHHh
Confidence            4578999987 78999999999999999999998761        10000  0     01245678889888888887  


Q ss_pred             CCCEEEEec
Q 023244           82 GCTGVLHVA   90 (285)
Q Consensus        82 ~~d~vih~a   90 (285)
                      ++|.|+-..
T Consensus        75 ~id~vi~~~   83 (395)
T PRK09288         75 KPDYIVPEI   83 (395)
T ss_pred             CCCEEEEee
Confidence            689888643

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=96.88  E-value=0.0029  Score=58.87  Aligned_cols=71  Identities=20%  Similarity=0.294  Sum_probs=58.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      .++|+|.|. |-+|+.+++.|.++|+++++++.++        +..+.+.+.     +...+.+|.+|++-++++ ++++
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~--------~~v~~~~~~-----g~~v~~GDat~~~~L~~agi~~A  465 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDP--------DHIETLRKF-----GMKVFYGDATRMDLLESAGAAKA  465 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCH--------HHHHHHHhc-----CCeEEEEeCCCHHHHHhcCCCcC
Confidence            467999998 9999999999999999999999988        555555443     678899999999988764 4568


Q ss_pred             CEEEEe
Q 023244           84 TGVLHV   89 (285)
Q Consensus        84 d~vih~   89 (285)
                      |.+|-+
T Consensus       466 ~~vvv~  471 (621)
T PRK03562        466 EVLINA  471 (621)
T ss_pred             CEEEEE
Confidence            888855

>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form

Probab=96.87  E-value=0.0096  Score=49.94  Aligned_cols=32  Identities=16%  Similarity=0.196  Sum_probs=25.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEec
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVR   37 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (285)
                      -+|.|.|||||.|.+|++.|.++. .++..+..
T Consensus         2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s   34 (310)
T TIGR01851         2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAP   34 (310)
T ss_pred             CeEEEECCCChhHHHHHHHHhCCCCeEEEEEec
Confidence            379999999999999999998874 35555543

This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.87  E-value=0.005  Score=54.79  Aligned_cols=74  Identities=19%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+||||+|                ||-.|.+|++++..+|++|+++.-..        .       +. ....++++.
T Consensus       255 ~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~--------~-------~~-~p~~v~~i~  318 (475)
T PRK13982        255 AGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPV--------D-------LA-DPQGVKVIH  318 (475)
T ss_pred             CCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCc--------C-------CC-CCCCceEEE
Confidence            5689999987                79999999999999999999987432        0       00 112455543


Q ss_pred             cCCCChhhHHHHhc---CCCEEEEecccCCC
Q 023244           68 ADLSHPDGFDAAIA---GCTGVLHVATPVDF   95 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~---~~d~vih~a~~~~~   95 (285)
                        +....++.+.++   ..|++|++||..++
T Consensus       319 --V~ta~eM~~av~~~~~~Di~I~aAAVaDy  347 (475)
T PRK13982        319 --VESARQMLAAVEAALPADIAIFAAAVADW  347 (475)
T ss_pred             --ecCHHHHHHHHHhhCCCCEEEEeccccce
Confidence              344444444443   27999999999777

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.86  E-value=0.022  Score=48.10  Aligned_cols=110  Identities=16%  Similarity=0.229  Sum_probs=66.3

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccC-----------ccc----hhhhhcCCCCCCCEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRN-----------SKD----LSFLKNLPGASERLRIFHADL   70 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-----------~~~----~~~~~~~~~~~~~~~~~~~Dl   70 (285)
                      +|+|.|+ |.+|.++++.|+..|. ++++++.+.....--+           ..+    ...+.++ ...-++..+..++
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-Np~v~V~~~~~~i   78 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-NPNVKIVAYHANI   78 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH-CCCCeEEEEeccC
Confidence            5899998 9999999999999986 7888876431100000           001    1111121 1223566677778


Q ss_pred             CChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee
Q 023244           71 SHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA  136 (285)
Q Consensus        71 ~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~  136 (285)
                      .+.....+.+++.|+||.+.-       +.         ..-..+-+.|.+.+  ..+|..++.+.
T Consensus        79 ~~~~~~~~f~~~~DvVv~a~D-------n~---------~ar~~in~~c~~~~--ip~I~~gt~G~  126 (312)
T cd01489          79 KDPDFNVEFFKQFDLVFNALD-------NL---------AARRHVNKMCLAAD--VPLIESGTTGF  126 (312)
T ss_pred             CCccchHHHHhcCCEEEECCC-------CH---------HHHHHHHHHHHHCC--CCEEEEecCcc
Confidence            765444567788999997532       11         12234556667766  57887776553

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.86  E-value=0.0017  Score=52.18  Aligned_cols=34  Identities=29%  Similarity=0.375  Sum_probs=31.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|+||+|.+|+.++..|++.|++|++.+|++
T Consensus         1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~   34 (219)
T TIGR01915         1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL   34 (219)
T ss_pred             CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence            4799999999999999999999999999998876

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.85  E-value=0.0099  Score=51.40  Aligned_cols=111  Identities=14%  Similarity=0.109  Sum_probs=66.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc---------Cccch----hhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR---------NSKDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      ++.+|+|.|+ |.+|+++++.|+..|. ++++++.+..  ++...         ...+.    ..+.++ +..-+++.+.
T Consensus        27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~v~~~~  104 (355)
T PRK05597         27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL-NPDVKVTVSV  104 (355)
T ss_pred             hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH-CCCcEEEEEE
Confidence            3468999999 9999999999999986 6888876531  00000         00111    112222 1223455555


Q ss_pred             cCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ..++. +...++++++|+||.+..       +.         ..-..+-++|.+.+  ..+|+.++..
T Consensus       105 ~~i~~-~~~~~~~~~~DvVvd~~d-------~~---------~~r~~~n~~c~~~~--ip~v~~~~~g  153 (355)
T PRK05597        105 RRLTW-SNALDELRDADVILDGSD-------NF---------DTRHLASWAAARLG--IPHVWASILG  153 (355)
T ss_pred             eecCH-HHHHHHHhCCCEEEECCC-------CH---------HHHHHHHHHHHHcC--CCEEEEEEec
Confidence            55553 456677889999998643       11         11123556677777  5788776543

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.85  E-value=0.0063  Score=46.01  Aligned_cols=58  Identities=19%  Similarity=0.237  Sum_probs=43.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|.|.+..+|+.|+..|.++|..|+......                                  ..+++..+++
T Consensus        35 ~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T----------------------------------~~l~~~~~~A   80 (160)
T PF02882_consen   35 EGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT----------------------------------KNLQEITRRA   80 (160)
T ss_dssp             TT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS----------------------------------SSHHHHHTTS
T ss_pred             CCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC----------------------------------Ccccceeeec
Confidence            578999999999999999999999999988765543                                  2366677899


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||-.+|....
T Consensus        81 DIVVsa~G~~~~   92 (160)
T PF02882_consen   81 DIVVSAVGKPNL   92 (160)
T ss_dssp             SEEEE-SSSTT-
T ss_pred             cEEeeeeccccc
Confidence            999998887555

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]

Probab=96.85  E-value=0.0049  Score=52.27  Aligned_cols=68  Identities=19%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|.|.|| |.+|+=++.+-...|++|++++-++.               .+...-.-..+..+.+|++.++++.+.+|
T Consensus         1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~---------------~PA~~va~~~i~~~~dD~~al~ela~~~D   64 (375)
T COG0026           1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDAD---------------APAAQVADRVIVAAYDDPEALRELAAKCD   64 (375)
T ss_pred             CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCC---------------CchhhcccceeecCCCCHHHHHHHHhhCC
Confidence            468999999 99999999999999999999997661               11111122356678889999999999998


Q ss_pred             EEEE
Q 023244           85 GVLH   88 (285)
Q Consensus        85 ~vih   88 (285)
                      +|-.
T Consensus        65 ViT~   68 (375)
T COG0026          65 VITY   68 (375)
T ss_pred             EEEE
Confidence            8764

>cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like

Probab=96.78  E-value=0.023  Score=46.03  Aligned_cols=109  Identities=10%  Similarity=0.110  Sum_probs=64.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccc-----ccC----ccch----hhhhcCCCCCCCEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPE-----HRN----SKDL----SFLKNLPGASERLRIFHADL   70 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~-----~~~----~~~~----~~~~~~~~~~~~~~~~~~Dl   70 (285)
                      +|+|.|+ |.+|+++++.|+..|. ++++++.+..  ++.     ...    ..+.    ..+.+. ...-++..+..++
T Consensus         1 kVlvvG~-GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~-np~v~i~~~~~~i   78 (234)
T cd01484           1 KVLLVGA-GGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDR-NPNCKVVPYQNKV   78 (234)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHH-CCCCEEEEEeccC
Confidence            5899997 9999999999999986 6778876431  000     000    0011    111111 1233566677777


Q ss_pred             CChhhH-HHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           71 SHPDGF-DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        71 ~d~~~~-~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .+...+ .+.++++|+||.+..       +         +..-+.+-+.+.+.+  ..+|..++.+
T Consensus        79 ~~~~~~~~~f~~~~DvVi~a~D-------n---------~~aR~~ln~~c~~~~--iplI~~g~~G  126 (234)
T cd01484          79 GPEQDFNDTFFEQFHIIVNALD-------N---------IIARRYVNGMLIFLI--VPLIESGTEG  126 (234)
T ss_pred             ChhhhchHHHHhCCCEEEECCC-------C---------HHHHHHHHHHHHHcC--CCEEEEcccC
Confidence            654433 456788999997522       1         122334566677776  5788777654

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.78  E-value=0.0054  Score=51.22  Aligned_cols=57  Identities=16%  Similarity=0.071  Sum_probs=48.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|.|.|.+|.+|+.++..|+++|++|++..+..                      .            .+.+..+++
T Consensus       158 ~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t----------------------~------------~l~e~~~~A  203 (301)
T PRK14194        158 TGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS----------------------T------------DAKALCRQA  203 (301)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC----------------------C------------CHHHHHhcC
Confidence            579999999999999999999999999999987765                      1            366677789


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+||-+.+...
T Consensus       204 DIVIsavg~~~  214 (301)
T PRK14194        204 DIVVAAVGRPR  214 (301)
T ss_pred             CEEEEecCChh
Confidence            99998887543

>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A

Probab=96.75  E-value=0.018  Score=41.17  Aligned_cols=85  Identities=14%  Similarity=0.144  Sum_probs=49.8

Q ss_pred             CeEEEecCC---chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |+|.|.|+|   +-.|..+++.|.+.|++|+.+.-+.              .+..    +.+       -...+.+.-..
T Consensus         1 ksiAVvGaS~~~~~~g~~v~~~l~~~G~~v~~Vnp~~--------------~~i~----G~~-------~y~sl~e~p~~   55 (116)
T PF13380_consen    1 KSIAVVGASDNPGKFGYRVLRNLKAAGYEVYPVNPKG--------------GEIL----GIK-------CYPSLAEIPEP   55 (116)
T ss_dssp             -EEEEET--SSTTSHHHHHHHHHHHTT-EEEEESTTC--------------SEET----TEE--------BSSGGGCSST
T ss_pred             CEEEEEcccCCCCChHHHHHHHHHhCCCEEEEECCCc--------------eEEC----cEE-------eeccccCCCCC
Confidence            589999998   7789999999999999999886544              0100    111       11122221245


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      +|.++-+..                 -..+..+++.+.+.| ++.+++.++
T Consensus        56 iDlavv~~~-----------------~~~~~~~v~~~~~~g-~~~v~~~~g   88 (116)
T PF13380_consen   56 IDLAVVCVP-----------------PDKVPEIVDEAAALG-VKAVWLQPG   88 (116)
T ss_dssp             -SEEEE-S------------------HHHHHHHHHHHHHHT--SEEEE-TT
T ss_pred             CCEEEEEcC-----------------HHHHHHHHHHHHHcC-CCEEEEEcc
Confidence            788776533                 112346788888888 899998887

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.75  E-value=0.0064  Score=51.55  Aligned_cols=73  Identities=21%  Similarity=0.220  Sum_probs=53.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++++|+|+|+ |.+|...++.+...|.+|++++|+.        ++.+..+++     ....+. |-+|++..+.+.+.+
T Consensus       166 pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~--------~K~e~a~~l-----GAd~~i-~~~~~~~~~~~~~~~  230 (339)
T COG1064         166 PGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSE--------EKLELAKKL-----GADHVI-NSSDSDALEAVKEIA  230 (339)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCCh--------HHHHHHHHh-----CCcEEE-EcCCchhhHHhHhhC
Confidence            4689999999 5999998888877899999999998        666666665     222222 222555555555459


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |++|.+++
T Consensus       231 d~ii~tv~  238 (339)
T COG1064         231 DAIIDTVG  238 (339)
T ss_pred             cEEEECCC
Confidence            99999877

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.74  E-value=0.006  Score=51.76  Aligned_cols=35  Identities=20%  Similarity=0.136  Sum_probs=32.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|.|.|+ |.+|+.++..|.+.|++|++.+|+.
T Consensus         3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~   37 (308)
T PRK14619          3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRS   37 (308)
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence            4678999987 9999999999999999999999976

>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms)

Probab=96.73  E-value=0.017  Score=49.76  Aligned_cols=33  Identities=30%  Similarity=0.483  Sum_probs=27.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEecC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (285)
                      ++|.|+||||++|++|++.|.++. .++..+..+
T Consensus         1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~   34 (341)
T TIGR00978         1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVAS   34 (341)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEEC
Confidence            479999999999999999998875 588877543

Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.

>COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]

Probab=96.73  E-value=0.004  Score=52.34  Aligned_cols=74  Identities=18%  Similarity=0.208  Sum_probs=52.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe-----cCCCChhhHHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH-----ADLSHPDGFDAA   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~Dl~d~~~~~~~   79 (285)
                      +++|.|.|+ |--|++|+..|++.||+|.+-.|++        +....+.+.   ..+.+++.     -++.-..++.++
T Consensus         1 ~~kI~ViGa-GswGTALA~~la~ng~~V~lw~r~~--------~~~~~i~~~---~~N~~yLp~i~lp~~l~at~Dl~~a   68 (329)
T COG0240           1 MMKIAVIGA-GSWGTALAKVLARNGHEVRLWGRDE--------EIVAEINET---RENPKYLPGILLPPNLKATTDLAEA   68 (329)
T ss_pred             CceEEEEcC-ChHHHHHHHHHHhcCCeeEEEecCH--------HHHHHHHhc---CcCccccCCccCCcccccccCHHHH
Confidence            368999998 9999999999999999999999987        333333322   22344443     223334578888


Q ss_pred             hcCCCEEEEec
Q 023244           80 IAGCTGVLHVA   90 (285)
Q Consensus        80 ~~~~d~vih~a   90 (285)
                      ++++|+|+-..
T Consensus        69 ~~~ad~iv~av   79 (329)
T COG0240          69 LDGADIIVIAV   79 (329)
T ss_pred             HhcCCEEEEEC
Confidence            88899888543

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.73  E-value=0.0047  Score=48.83  Aligned_cols=35  Identities=26%  Similarity=0.251  Sum_probs=31.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|+|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus        27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence            4689999999 7999999999999999999888876

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=96.73  E-value=0.0029  Score=53.86  Aligned_cols=38  Identities=26%  Similarity=0.435  Sum_probs=34.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |.+++|+|+|.|+ |-+|+.++..|.+.|++|+++.|+.
T Consensus         1 ~~~~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~   38 (313)
T PRK06249          1 MDSETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD   38 (313)
T ss_pred             CCCcCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence            6777789999988 9999999999999999999999975

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.69  E-value=0.0021  Score=49.86  Aligned_cols=69  Identities=20%  Similarity=0.068  Sum_probs=48.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|.|.|. |-||+.+++.|..-|.+|++.+|+.        +........     .+        ...+++++++++
T Consensus        35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~--------~~~~~~~~~-----~~--------~~~~l~ell~~a   92 (178)
T PF02826_consen   35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSP--------KPEEGADEF-----GV--------EYVSLDELLAQA   92 (178)
T ss_dssp             TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSC--------HHHHHHHHT-----TE--------EESSHHHHHHH-
T ss_pred             CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccC--------Chhhhcccc-----cc--------eeeehhhhcchh
Confidence            4689999987 9999999999999999999999987        221111111     11        233577888899


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+|+.+.....
T Consensus        93 Div~~~~plt~  103 (178)
T PF02826_consen   93 DIVSLHLPLTP  103 (178)
T ss_dssp             SEEEE-SSSST
T ss_pred             hhhhhhhcccc
Confidence            99988877544

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.68  E-value=0.027  Score=45.48  Aligned_cols=109  Identities=15%  Similarity=0.202  Sum_probs=63.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCcccc-----------Cccch----hhhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHR-----------NSKDL----SFLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-----------~~~~~----~~~~~~~~~~~~~~~~~~   68 (285)
                      +.+|+|.|+ |.+|+++++.|+..|. ++++++.+.....--           ...+.    ..+.++ +..-+++.+..
T Consensus        11 ~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i-nP~~~V~~~~~   88 (231)
T cd00755          11 NAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDI-NPECEVDAVEE   88 (231)
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHH-CCCcEEEEeee
Confidence            568999998 9999999999999986 788888653110000           00111    111111 11224444444


Q ss_pred             CCCChhhHHHHhc-CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           69 DLSHPDGFDAAIA-GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        69 Dl~d~~~~~~~~~-~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      .++ ++...+++. ++|+||.+..       +.         .....|.++|.+.+  .++|...+.
T Consensus        89 ~i~-~~~~~~l~~~~~D~VvdaiD-------~~---------~~k~~L~~~c~~~~--ip~I~s~g~  136 (231)
T cd00755          89 FLT-PDNSEDLLGGDPDFVVDAID-------SI---------RAKVALIAYCRKRK--IPVISSMGA  136 (231)
T ss_pred             ecC-HhHHHHHhcCCCCEEEEcCC-------CH---------HHHHHHHHHHHHhC--CCEEEEeCC
Confidence            444 344555654 5899997632       11         12235678888877  567665544

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.68  E-value=0.02  Score=48.90  Aligned_cols=97  Identities=21%  Similarity=0.169  Sum_probs=60.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~   81 (285)
                      +.+|||+||+|.+|+..++.+...|..++++..++        ++...++++..     .. ..|..+.   +.+.++..
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~--------~k~~~~~~lGA-----d~-vi~y~~~~~~~~v~~~t~  208 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSS--------EKLELLKELGA-----DH-VINYREEDFVEQVRELTG  208 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCH--------HHHHHHHhcCC-----CE-EEcCCcccHHHHHHHHcC
Confidence            57899999999999999999888897777776665        34445555521     11 1223332   23444443


Q ss_pred             --CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           82 --GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        82 --~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                        ++|+|+...+-          .++.       ..++.++..   .+++.++..+
T Consensus       209 g~gvDvv~D~vG~----------~~~~-------~~l~~l~~~---G~lv~ig~~~  244 (326)
T COG0604         209 GKGVDVVLDTVGG----------DTFA-------ASLAALAPG---GRLVSIGALS  244 (326)
T ss_pred             CCCceEEEECCCH----------HHHH-------HHHHHhccC---CEEEEEecCC
Confidence              48999987662          2221       223334333   5888888765

>COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only]

Probab=96.65  E-value=0.018  Score=45.47  Aligned_cols=66  Identities=23%  Similarity=0.239  Sum_probs=39.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc--CCe-EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH--GYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~--g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|.+.|+ |.||..+++.+.+.  +.+ |.+.+|+.        ++...+....           ..+...++.+++..
T Consensus         1 l~vgiVGc-GaIG~~l~e~v~~~~~~~e~v~v~D~~~--------ek~~~~~~~~-----------~~~~~s~ide~~~~   60 (255)
T COG1712           1 LKVGIVGC-GAIGKFLLELVRDGRVDFELVAVYDRDE--------EKAKELEASV-----------GRRCVSDIDELIAE   60 (255)
T ss_pred             CeEEEEec-cHHHHHHHHHHhcCCcceeEEEEecCCH--------HHHHHHHhhc-----------CCCccccHHHHhhc
Confidence            46899998 99999999988654  355 44556665        4554443321           11112334444556


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      +|.++-+|+
T Consensus        61 ~DlvVEaAS   69 (255)
T COG1712          61 VDLVVEAAS   69 (255)
T ss_pred             cceeeeeCC
Confidence            666666665

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.63  E-value=0.0073  Score=50.59  Aligned_cols=81  Identities=11%  Similarity=0.081  Sum_probs=48.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhc-CCCC-CCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN-LPGA-SERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+++|.|| |..+++++..|+..|. +|+++.|+.     ...++...+.+ +... ...+.+  .++.+.+.+.+.+
T Consensus       123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~-----~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~~~~  194 (288)
T PRK12749        123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRD-----EFFDKALAFAQRVNENTDCVVTV--TDLADQQAFAEAL  194 (288)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc-----cHHHHHHHHHHHhhhccCceEEE--echhhhhhhhhhc
Confidence            3578999998 6669999999998885 799999985     11123333322 1111 111222  2222333344556


Q ss_pred             cCCCEEEEeccc
Q 023244           81 AGCTGVLHVATP   92 (285)
Q Consensus        81 ~~~d~vih~a~~   92 (285)
                      .++|+|||+-..
T Consensus       195 ~~aDivINaTp~  206 (288)
T PRK12749        195 ASADILTNGTKV  206 (288)
T ss_pred             ccCCEEEECCCC
Confidence            679999997644

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=96.62  E-value=0.0049  Score=52.67  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=30.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|.|+ |.+|+.++..|++.|++|++++|++
T Consensus         2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~   34 (325)
T PRK00094          2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP   34 (325)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            58999997 9999999999999999999999976

>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate

Probab=96.61  E-value=0.0018  Score=49.08  Aligned_cols=74  Identities=16%  Similarity=0.237  Sum_probs=46.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC---CCCCEEEEecCCCChhhHHHHhcCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG---ASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ||.|.|| |..|..++..|+++|++|++..|++        +....+.+...   ..+.+.+- ..+.=..++++.++++
T Consensus         1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~--------~~~~~i~~~~~n~~~~~~~~l~-~~i~~t~dl~~a~~~a   70 (157)
T PF01210_consen    1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDE--------EQIEEINETRQNPKYLPGIKLP-ENIKATTDLEEALEDA   70 (157)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCH--------HHHHHHHHHTSETTTSTTSBEE-TTEEEESSHHHHHTT-
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccH--------HHHHHHHHhCCCCCCCCCcccC-cccccccCHHHHhCcc
Confidence            6899999 9999999999999999999999986        33333322110   01111111 1111124577788899


Q ss_pred             CEEEEec
Q 023244           84 TGVLHVA   90 (285)
Q Consensus        84 d~vih~a   90 (285)
                      |+||-..
T Consensus        71 d~Iiiav   77 (157)
T PF01210_consen   71 DIIIIAV   77 (157)
T ss_dssp             SEEEE-S
T ss_pred             cEEEecc
Confidence            9988543

This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.61  E-value=0.006  Score=51.72  Aligned_cols=72  Identities=22%  Similarity=0.254  Sum_probs=47.4

Q ss_pred             CCCCC-CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            1 MEEGK-GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         1 M~~~~-k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |+.++ ++|.|+| .|.+|+.++..|.+.|+  +|++++|++        +........     ++..   ..  .....
T Consensus         1 ~~~~~~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~--------~~~~~a~~~-----g~~~---~~--~~~~~   61 (307)
T PRK07502          1 MSAPLFDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSA--------ETRARAREL-----GLGD---RV--TTSAA   61 (307)
T ss_pred             CCccCCcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCH--------HHHHHHHhC-----CCCc---ee--cCCHH
Confidence            66544 7899998 59999999999998884  899999876        333333222     1100   01  11234


Q ss_pred             HHhcCCCEEEEecc
Q 023244           78 AAIAGCTGVLHVAT   91 (285)
Q Consensus        78 ~~~~~~d~vih~a~   91 (285)
                      +.++++|+||.+..
T Consensus        62 ~~~~~aDvViiavp   75 (307)
T PRK07502         62 EAVKGADLVILCVP   75 (307)
T ss_pred             HHhcCCCEEEECCC
Confidence            55678999998765

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.60  E-value=0.0068  Score=50.71  Aligned_cols=74  Identities=22%  Similarity=0.218  Sum_probs=48.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..++|+|.|+ |..|+.++..|++.|. +|++++|+.        ++.+.+.+ +........+...     +.+.+.+.
T Consensus       126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~--------~ka~~la~~l~~~~~~~~~~~~-----~~~~~~~~  191 (284)
T PRK12549        126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDP--------ARAAALADELNARFPAARATAG-----SDLAAALA  191 (284)
T ss_pred             cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHHHHhhCCCeEEEec-----cchHhhhC
Confidence            3578999999 8899999999999996 799999986        33333322 1111112222221     22344567


Q ss_pred             CCCEEEEecc
Q 023244           82 GCTGVLHVAT   91 (285)
Q Consensus        82 ~~d~vih~a~   91 (285)
                      ++|+||++-.
T Consensus       192 ~aDiVInaTp  201 (284)
T PRK12549        192 AADGLVHATP  201 (284)
T ss_pred             CCCEEEECCc
Confidence            8999999843

>PRK06849 hypothetical protein; Provisional

Probab=96.60  E-value=0.012  Score=51.74  Aligned_cols=38  Identities=24%  Similarity=0.152  Sum_probs=34.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |. .+|+|||||++..+|..+++.|.+.|++|++++..+
T Consensus         1 ~~-~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~   38 (389)
T PRK06849          1 MN-TKKTVLITGARAPAALELARLFHNAGHTVILADSLK   38 (389)
T ss_pred             CC-CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence            44 468999999999999999999999999999998875

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.58  E-value=0.038  Score=48.01  Aligned_cols=111  Identities=17%  Similarity=0.208  Sum_probs=66.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--CccccC---------ccch----hhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHRN---------SKDL----SFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~~---------~~~~----~~~~~~~~~~~~~~~~~   67 (285)
                      +..+|+|.|+ |.+|++++..|+..|. ++++++.+..  ++....         ..+.    ..+.++ ...-+++.+.
T Consensus        40 ~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~-np~v~i~~~~  117 (370)
T PRK05600         40 HNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEI-QPDIRVNALR  117 (370)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHH-CCCCeeEEee
Confidence            3568999998 9999999999999995 7888887521  111100         0111    112121 1122455555


Q ss_pred             cCCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           68 ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        68 ~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ..++ .+.+.++++++|+||.+..       +.         ..-..+-++|.+.+  ..+|+.+...
T Consensus       118 ~~i~-~~~~~~~~~~~DlVid~~D-------n~---------~~r~~in~~~~~~~--iP~v~~~~~g  166 (370)
T PRK05600        118 ERLT-AENAVELLNGVDLVLDGSD-------SF---------ATKFLVADAAEITG--TPLVWGTVLR  166 (370)
T ss_pred             eecC-HHHHHHHHhCCCEEEECCC-------CH---------HHHHHHHHHHHHcC--CCEEEEEEec
Confidence            5554 4457778889999997643       11         11224456677776  5677766543

>PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated

Probab=96.58  E-value=0.039  Score=48.43  Aligned_cols=112  Identities=13%  Similarity=0.093  Sum_probs=66.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Cccc-----c----Cccchh----hhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEH-----R----NSKDLS----FLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~-----~----~~~~~~----~~~~~~~~~~~~~~~~~   68 (285)
                      ..+|+|.|+ |.+|++++..|+..|. ++++++.+..  ++..     .    ...+..    .+.++ ...-++..+..
T Consensus        42 ~~~VlviG~-GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~-np~v~i~~~~~  119 (392)
T PRK07878         42 NARVLVIGA-GGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI-NPLVNVRLHEF  119 (392)
T ss_pred             cCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHh-CCCcEEEEEec
Confidence            468999999 9999999999999986 6777776421  0000     0    001111    11111 11223444555


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceee
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  137 (285)
                      .++. +...++++++|+||.+..       +.         ..-..+-++|.+.+  ..+|+.++...+
T Consensus       120 ~i~~-~~~~~~~~~~D~Vvd~~d-------~~---------~~r~~ln~~~~~~~--~p~v~~~~~g~~  169 (392)
T PRK07878        120 RLDP-SNAVELFSQYDLILDGTD-------NF---------ATRYLVNDAAVLAG--KPYVWGSIYRFE  169 (392)
T ss_pred             cCCh-hHHHHHHhcCCEEEECCC-------CH---------HHHHHHHHHHHHcC--CCEEEEEeccCE
Confidence            5553 346677889999997532       11         11223566777777  578887765543

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=96.58  E-value=0.019  Score=50.23  Aligned_cols=32  Identities=9%  Similarity=0.116  Sum_probs=27.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|.|. |++|..++..|+ .||+|++++++.
T Consensus         1 mkI~VIGl-GyvGl~~A~~lA-~G~~VigvD~d~   32 (388)
T PRK15057          1 MKITISGT-GYVGLSNGLLIA-QNHEVVALDILP   32 (388)
T ss_pred             CEEEEECC-CHHHHHHHHHHH-hCCcEEEEECCH
Confidence            36899976 999999997776 599999999987

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=96.58  E-value=0.0057  Score=40.51  Aligned_cols=32  Identities=47%  Similarity=0.591  Sum_probs=30.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|.|| |++|-.++..|.+.|.+|+++.|++
T Consensus         1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~   32 (80)
T PF00070_consen    1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSD   32 (80)
T ss_dssp             EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccc
Confidence            5889988 9999999999999999999999987

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain

Probab=96.58  E-value=0.025  Score=40.77  Aligned_cols=31  Identities=26%  Similarity=0.565  Sum_probs=26.6

Q ss_pred             eEEEecCCchhHHHHHHHHHHc-CCeEEEEec
Q 023244            7 RVCVTGGTGFIASWLIMRLLDH-GYSVTTTVR   37 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r   37 (285)
                      ++.|+|++|.+|..+++.|.+. ++++.++..
T Consensus         1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~   32 (122)
T smart00859        1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAA   32 (122)
T ss_pred             CEEEECCCChHHHHHHHHHhcCCCceEEEEEe
Confidence            5899999999999999999884 788888833

The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.57  E-value=0.029  Score=47.86  Aligned_cols=98  Identities=22%  Similarity=0.140  Sum_probs=61.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHH---HHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD---AAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~   80 (285)
                      .+.+++|+|+++.+|..+++.+...|.+|++++++.        +....+....   ..   ...|..+.+...   +..
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~--------~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~  231 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSE--------DKLERAKELG---AD---YVIDYRKEDFVREVRELT  231 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC---CC---eEEecCChHHHHHHHHHh
Confidence            356899999999999999999999999999888876        3333333321   11   113444433323   222


Q ss_pred             c--CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           81 A--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        81 ~--~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .  ++|.++++++..          .       ....++.+++.   .+++.+|+..
T Consensus       232 ~~~~~d~~i~~~g~~----------~-------~~~~~~~l~~~---G~~v~~~~~~  268 (342)
T cd08266         232 GKRGVDVVVEHVGAA----------T-------WEKSLKSLARG---GRLVTCGATT  268 (342)
T ss_pred             CCCCCcEEEECCcHH----------H-------HHHHHHHhhcC---CEEEEEecCC
Confidence            2  479999988721          0       11233444443   5899888754

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed

Probab=96.55  E-value=0.016  Score=49.90  Aligned_cols=32  Identities=19%  Similarity=0.346  Sum_probs=24.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCe---EEEEec
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYS---VTTTVR   37 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~---V~~~~r   37 (285)
                      ++|.|.||||++|+.|.+.|+++ .+.   +..+..
T Consensus         2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss   37 (369)
T PRK06598          2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFST   37 (369)
T ss_pred             eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecc
Confidence            68999999999999999966655 555   555433

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=96.54  E-value=0.0062  Score=55.20  Aligned_cols=34  Identities=24%  Similarity=0.250  Sum_probs=31.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      -|+|.|+|+ |.+|+.++..|++.|++|++.++++
T Consensus         4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~   37 (495)
T PRK07531          4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHP   37 (495)
T ss_pred             cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            468999987 9999999999999999999999987

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=96.53  E-value=0.0069  Score=51.90  Aligned_cols=37  Identities=27%  Similarity=0.262  Sum_probs=32.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+. +|+|.|.|+ |-+|+.++..|++.|++|++.+|++
T Consensus         1 ~~~-~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~   37 (328)
T PRK14618          1 MHH-GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRP   37 (328)
T ss_pred             CCC-CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            443 568999987 9999999999999999999999976

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.52  E-value=0.0064  Score=53.56  Aligned_cols=75  Identities=9%  Similarity=0.099  Sum_probs=53.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+++|+|.|+ |.+|+.++..|...|. ++++..|+.        ++...+.+...   .     +.....+++.+.+.+
T Consensus       180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~--------~ra~~La~~~~---~-----~~~~~~~~l~~~l~~  242 (414)
T PRK13940        180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTI--------EKAQKITSAFR---N-----ASAHYLSELPQLIKK  242 (414)
T ss_pred             cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHHhc---C-----CeEecHHHHHHHhcc
Confidence            4689999999 9999999999999985 788889986        34444333210   1     112233566777889


Q ss_pred             CCEEEEecccCCC
Q 023244           83 CTGVLHVATPVDF   95 (285)
Q Consensus        83 ~d~vih~a~~~~~   95 (285)
                      +|+||++-+...+
T Consensus       243 aDiVI~aT~a~~~  255 (414)
T PRK13940        243 ADIIIAAVNVLEY  255 (414)
T ss_pred             CCEEEECcCCCCe
Confidence            9999999876554

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.51  E-value=0.03  Score=47.71  Aligned_cols=74  Identities=18%  Similarity=0.214  Sum_probs=49.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~   80 (285)
                      .+.+++|+||+|.+|..+++.+...|.+|++++++.        ++...+.++.     +..+ .|..+.   +.+.++.
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~--------~~~~~l~~~G-----a~~v-i~~~~~~~~~~v~~~~  208 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSD--------DKVAWLKELG-----FDAV-FNYKTVSLEEALKEAA  208 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC-----CCEE-EeCCCccHHHHHHHHC
Confidence            356899999999999999888888899999988876        5555555542     1111 222222   2233322


Q ss_pred             -cCCCEEEEecc
Q 023244           81 -AGCTGVLHVAT   91 (285)
Q Consensus        81 -~~~d~vih~a~   91 (285)
                       .++|+|+++.+
T Consensus       209 ~~gvd~vld~~g  220 (329)
T cd08294         209 PDGIDCYFDNVG  220 (329)
T ss_pred             CCCcEEEEECCC
Confidence             24899998766

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=96.51  E-value=0.0084  Score=50.55  Aligned_cols=66  Identities=17%  Similarity=0.220  Sum_probs=46.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|.|.|. |.+|+.+++.|++.|++|++.+|++        +....+...     .+.       -.++..++++++|
T Consensus         2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~--------~~~~~~~~~-----g~~-------~~~~~~e~~~~~d   60 (296)
T PRK11559          2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNP--------EAVAEVIAA-----GAE-------TASTAKAVAEQCD   60 (296)
T ss_pred             CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH--------HHHHHHHHC-----CCe-------ecCCHHHHHhcCC
Confidence            468999986 9999999999999999999998876        333333222     111       1123455667889


Q ss_pred             EEEEecc
Q 023244           85 GVLHVAT   91 (285)
Q Consensus        85 ~vih~a~   91 (285)
                      +||-+..
T Consensus        61 ~vi~~vp   67 (296)
T PRK11559         61 VIITMLP   67 (296)
T ss_pred             EEEEeCC
Confidence            8887654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.51  E-value=0.014  Score=43.20  Aligned_cols=56  Identities=16%  Similarity=0.138  Sum_probs=46.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|.+.-+|..|+..|.++|..|+...++.                                  .++++.++++
T Consensus        27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t----------------------------------~~l~~~v~~A   72 (140)
T cd05212          27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT----------------------------------IQLQSKVHDA   72 (140)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC----------------------------------cCHHHHHhhC
Confidence            578999999999999999999999999998887654                                  1356677889


Q ss_pred             CEEEEecccC
Q 023244           84 TGVLHVATPV   93 (285)
Q Consensus        84 d~vih~a~~~   93 (285)
                      |+||-..+..
T Consensus        73 DIVvsAtg~~   82 (140)
T cd05212          73 DVVVVGSPKP   82 (140)
T ss_pred             CEEEEecCCC
Confidence            9999887755

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.50  E-value=0.016  Score=43.90  Aligned_cols=32  Identities=34%  Similarity=0.305  Sum_probs=29.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV   36 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~   36 (285)
                      .+++|+|.|| |-+|...++.|++.|++|++++
T Consensus        12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719         12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            5789999999 9999999999999999999885

>PRK07877 hypothetical protein; Provisional

Probab=96.49  E-value=0.028  Score=52.91  Aligned_cols=111  Identities=15%  Similarity=0.200  Sum_probs=68.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCC--Ccccc--------Cccchhhhhc-CC--CCCCCEEEEec
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSEL--DPEHR--------NSKDLSFLKN-LP--GASERLRIFHA   68 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~--~~~~~--------~~~~~~~~~~-~~--~~~~~~~~~~~   68 (285)
                      ++.+|+|.|+ | +|+.++..|+..|.  ++++++.+..  +|.-.        ...|....++ +.  +..-+++.+..
T Consensus       106 ~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~~~~  183 (722)
T PRK07877        106 GRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEVFTD  183 (722)
T ss_pred             hcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEEEec
Confidence            3568999999 7 99999999999884  7888886421  00000        0011111111 11  12335666666


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .++ .+.+.++++++|+||.+.-       +         +..-..+.++|.+.+  ..+|+-++..
T Consensus       184 ~i~-~~n~~~~l~~~DlVvD~~D-------~---------~~~R~~ln~~a~~~~--iP~i~~~~~~  231 (722)
T PRK07877        184 GLT-EDNVDAFLDGLDVVVEECD-------S---------LDVKVLLREAARARR--IPVLMATSDR  231 (722)
T ss_pred             cCC-HHHHHHHhcCCCEEEECCC-------C---------HHHHHHHHHHHHHcC--CCEEEEcCCC
Confidence            676 5678888999999998632       1         112224557777777  6788777543

>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]

Probab=96.49  E-value=0.018  Score=48.57  Aligned_cols=26  Identities=31%  Similarity=0.399  Sum_probs=23.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY   30 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~   30 (285)
                      +++|.|.||||.+|+.+++.|.++.+
T Consensus         1 ~~~VavvGATG~VG~~~~~~L~e~~f   26 (334)
T COG0136           1 KLNVAVLGATGAVGQVLLELLEERHF   26 (334)
T ss_pred             CcEEEEEeccchHHHHHHHHHHhcCC
Confidence            46899999999999999999988654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.47  E-value=0.0076  Score=50.41  Aligned_cols=78  Identities=19%  Similarity=0.086  Sum_probs=50.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+++++|.|+ |..|+.++..|.+.|. +|+++.|+.        ++...+.+.-.....+.  .  +...+++...+.+
T Consensus       124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~--------~ka~~La~~~~~~~~~~--~--~~~~~~~~~~~~~  190 (282)
T TIGR01809       124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNP--------DKLSRLVDLGVQVGVIT--R--LEGDSGGLAIEKA  190 (282)
T ss_pred             CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCH--------HHHHHHHHHhhhcCcce--e--ccchhhhhhcccC
Confidence            3578999988 9999999999999986 799999986        44444332211001111  1  1111234445567


Q ss_pred             CCEEEEecccCC
Q 023244           83 CTGVLHVATPVD   94 (285)
Q Consensus        83 ~d~vih~a~~~~   94 (285)
                      +|+|||+-....
T Consensus       191 ~DiVInaTp~g~  202 (282)
T TIGR01809       191 AEVLVSTVPADV  202 (282)
T ss_pred             CCEEEECCCCCC
Confidence            999999876543

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=96.47  E-value=0.0077  Score=49.95  Aligned_cols=34  Identities=29%  Similarity=0.371  Sum_probs=30.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC---CeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~   39 (285)
                      ||+|.|.|+ |.+|+.++..|.+.|   ++|++.+|++
T Consensus         2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~   38 (267)
T PRK11880          2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP   38 (267)
T ss_pred             CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence            578999997 999999999999888   7899999976

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.47  E-value=0.0041  Score=52.19  Aligned_cols=34  Identities=29%  Similarity=0.392  Sum_probs=31.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .++|.|.|+ |.+|+.++..|++.|++|++++++.
T Consensus         3 ~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~   36 (287)
T PRK08293          3 IKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISD   36 (287)
T ss_pred             ccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence            368999987 9999999999999999999999986

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.46  E-value=0.0043  Score=42.64  Aligned_cols=66  Identities=21%  Similarity=0.205  Sum_probs=43.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHcC---CeEEEE-ecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHG---YSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ||.|.|+ |.+|+.|++.|++.|   ++|++. .|++        ++...+.+..    .+....      .+..+++++
T Consensus         1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~--------~~~~~~~~~~----~~~~~~------~~~~~~~~~   61 (96)
T PF03807_consen    1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSP--------EKAAELAKEY----GVQATA------DDNEEAAQE   61 (96)
T ss_dssp             EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSH--------HHHHHHHHHC----TTEEES------EEHHHHHHH
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcH--------HHHHHHHHhh----cccccc------CChHHhhcc
Confidence            5778855 999999999999999   899966 7776        4444443221    111111      135566678


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      +|+||-+.-
T Consensus        62 advvilav~   70 (96)
T PF03807_consen   62 ADVVILAVK   70 (96)
T ss_dssp             TSEEEE-S-
T ss_pred             CCEEEEEEC
Confidence            999997754

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]

Probab=96.44  E-value=0.0063  Score=51.81  Aligned_cols=74  Identities=19%  Similarity=0.230  Sum_probs=58.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh-hHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD-GFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~~   82 (285)
                      +++||+.|+ ||+.+.++..|++++ .+|++..|..        +..+.+..    +.+++.+..|+.+.+ .++...+.
T Consensus         2 ~~~vlllgs-g~v~~p~~d~ls~~~dv~vtva~~~~--------~~~~~~~~----~~~~~av~ldv~~~~~~L~~~v~~   68 (445)
T KOG0172|consen    2 KKGVLLLGS-GFVSRPVADFLSRKKDVNVTVASRTL--------KDAEALVK----GINIKAVSLDVADEELALRKEVKP   68 (445)
T ss_pred             CcceEEecC-ccccchHHHHHhhcCCceEEEehhhH--------HHHHHHhc----CCCccceEEEccchHHHHHhhhcc
Confidence            578999987 999999999999875 5888888866        33333332    225888999999998 89888888


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      .|.|+-+-.
T Consensus        69 ~D~viSLlP   77 (445)
T KOG0172|consen   69 LDLVISLLP   77 (445)
T ss_pred             cceeeeecc
Confidence            999987754

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.44  E-value=0.025  Score=48.62  Aligned_cols=34  Identities=21%  Similarity=0.082  Sum_probs=30.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      .+|||+||+|.+|..+++.+...|. +|++++++.
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~  190 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSD  190 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCH
Confidence            6899999999999999988878898 799998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.41  E-value=0.015  Score=49.41  Aligned_cols=37  Identities=19%  Similarity=0.229  Sum_probs=32.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+. .++|.|.|+ |.+|+.++..|++.|++|++++++.
T Consensus         1 ~~~-~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~   37 (311)
T PRK06130          1 MNP-IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME   37 (311)
T ss_pred             CCC-ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            553 578999988 9999999999999999999999876

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=96.41  E-value=0.0076  Score=50.36  Aligned_cols=33  Identities=27%  Similarity=0.321  Sum_probs=30.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|.|. |.+|+.++..|.+.|++|++.+|++
T Consensus         1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~   33 (279)
T PRK07417          1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRE   33 (279)
T ss_pred             CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            37999985 9999999999999999999999976

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.39  E-value=0.017  Score=45.78  Aligned_cols=35  Identities=26%  Similarity=0.381  Sum_probs=31.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|+|+|| |-+|...++.|++.|++|+++.+..
T Consensus         9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            5789999999 9999999999999999999997643

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.38  E-value=0.031  Score=45.94  Aligned_cols=98  Identities=19%  Similarity=0.168  Sum_probs=59.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH--h-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA--I-   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~-   80 (285)
                      .+.+|+|+|+++ +|..+++.+...|.+|+++++++        +....+.+..    .-..  .|..+.+....+  . 
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~--------~~~~~~~~~g----~~~~--~~~~~~~~~~~~~~~~  198 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSD--------EKLELAKELG----ADHV--IDYKEEDLEEELRLTG  198 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCH--------HHHHHHHHhC----Ccee--ccCCcCCHHHHHHHhc
Confidence            356899999999 99999998888899999998876        3444443331    0111  233332222221  1 


Q ss_pred             -cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           81 -AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        81 -~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                       ..+|+++++++..                .....+++.++..   .+++.++...
T Consensus       199 ~~~~d~vi~~~~~~----------------~~~~~~~~~l~~~---G~~v~~~~~~  235 (271)
T cd05188         199 GGGADVVIDAVGGP----------------ETLAQALRLLRPG---GRIVVVGGTS  235 (271)
T ss_pred             CCCCCEEEECCCCH----------------HHHHHHHHhcccC---CEEEEEccCC
Confidence             3589999987621                1122344445443   4888888654

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.38  E-value=0.0096  Score=50.55  Aligned_cols=70  Identities=19%  Similarity=0.147  Sum_probs=49.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++|+|.|+ |-+|..+++.|...| .+|++++|+.        ++...+ ....     ..     ..+.+++.+.+.
T Consensus       177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~--------~ra~~la~~~g-----~~-----~~~~~~~~~~l~  237 (311)
T cd05213         177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTY--------ERAEELAKELG-----GN-----AVPLDELLELLN  237 (311)
T ss_pred             cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHcC-----Ce-----EEeHHHHHHHHh
Confidence            4689999998 999999999998865 6898999986        333332 2221     11     222345667778


Q ss_pred             CCCEEEEeccc
Q 023244           82 GCTGVLHVATP   92 (285)
Q Consensus        82 ~~d~vih~a~~   92 (285)
                      ++|+||.+.+.
T Consensus       238 ~aDvVi~at~~  248 (311)
T cd05213         238 EADVVISATGA  248 (311)
T ss_pred             cCCEEEECCCC
Confidence            89999988663

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=96.38  E-value=0.025  Score=43.93  Aligned_cols=78  Identities=9%  Similarity=0.057  Sum_probs=51.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC-hhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~   82 (285)
                      .+|+|+|.|-|.-+|..|+..|+++|..|++++.+.-        .   +...   ......-.....| ...+.+.+++
T Consensus        61 ~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~--------~---~~~~---~~~~~hs~t~~~~~~~~l~~~~~~  126 (197)
T cd01079          61 YGKTITIINRSEVVGRPLAALLANDGARVYSVDINGI--------Q---VFTR---GESIRHEKHHVTDEEAMTLDCLSQ  126 (197)
T ss_pred             CCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcc--------c---cccc---ccccccccccccchhhHHHHHhhh
Confidence            5789999999999999999999999999998865440        0   0000   0000000111112 1236778889


Q ss_pred             CCEEEEecccCCC
Q 023244           83 CTGVLHVATPVDF   95 (285)
Q Consensus        83 ~d~vih~a~~~~~   95 (285)
                      +|+||-..|...+
T Consensus       127 ADIVIsAvG~~~~  139 (197)
T cd01079         127 SDVVITGVPSPNY  139 (197)
T ss_pred             CCEEEEccCCCCC
Confidence            9999988886554

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.37  E-value=0.036  Score=47.88  Aligned_cols=36  Identities=19%  Similarity=0.163  Sum_probs=31.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+.+|+|+||+|.+|..+++.+...|.+|++++++.
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~  193 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSS  193 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCH
Confidence            357899999999999999988888899999888766

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.37  E-value=0.0058  Score=46.91  Aligned_cols=78  Identities=19%  Similarity=0.113  Sum_probs=49.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC-------------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL-------------   70 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------------   70 (285)
                      +..+|+|+|+ |.+|..-++.|...|++|+.++...        .........     ....+..+.             
T Consensus        19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~--------~~~~~~~~~-----~~~~i~~~~~~~~~~~~~~~~~   84 (168)
T PF01262_consen   19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERP--------ERLRQLESL-----GAYFIEVDYEDHLERKDFDKAD   84 (168)
T ss_dssp             -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSH--------HHHHHHHHT-----TTEESEETTTTTTTSB-CCHHH
T ss_pred             CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCH--------HHHHhhhcc-----cCceEEEcccccccccccchhh
Confidence            3468999986 9999999999999999999999876        344433333     222333321             


Q ss_pred             -----C-ChhhHHHHhcCCCEEEEecccCCC
Q 023244           71 -----S-HPDGFDAAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        71 -----~-d~~~~~~~~~~~d~vih~a~~~~~   95 (285)
                           . ....+.+.++.+|+||.++-+...
T Consensus        85 ~~~~~~~~~~~f~~~i~~~d~vI~~~~~~~~  115 (168)
T PF01262_consen   85 YYEHPESYESNFAEFIAPADIVIGNGLYWGK  115 (168)
T ss_dssp             CHHHCCHHHHHHHHHHHH-SEEEEHHHBTTS
T ss_pred             hhHHHHHhHHHHHHHHhhCcEEeeecccCCC
Confidence                 1 112455556678999987766443

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=96.37  E-value=0.084  Score=44.13  Aligned_cols=60  Identities=25%  Similarity=0.340  Sum_probs=44.8

Q ss_pred             CCeEEEecC-CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh
Q 023244            5 KGRVCVTGG-TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD   74 (285)
Q Consensus         5 ~k~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~   74 (285)
                      +..|+|.|. +--+++.++..|-++|+-|++...+.        +.....+...  ...+.....|..++.
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~--------ed~~~ve~e~--~~dI~~L~ld~~~~~   63 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSA--------EDEKYVESED--RPDIRPLWLDDSDPS   63 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCH--------HHHHHHHhcc--CCCCCCcccCCCCCc
Confidence            457889995 89999999999999999999999987        4444333332  235777778886653

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]

Probab=96.36  E-value=0.05  Score=44.23  Aligned_cols=35  Identities=23%  Similarity=0.283  Sum_probs=27.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEE-EEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVT-TTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~-~~~r~~   39 (285)
                      +++|.|.|++|-+|+.+++.+.+.. .++. ++.|.+
T Consensus         2 ~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~   38 (266)
T COG0289           2 MIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPG   38 (266)
T ss_pred             CceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCC
Confidence            5789999999999999999998764 5655 445544

>KOG1496 consensus Malate dehydrogenase [Energy production and conversion]

Probab=96.35  E-value=0.087  Score=42.11  Aligned_cols=175  Identities=15%  Similarity=0.074  Sum_probs=90.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc---C--CeEEEEecCCCCccccCccchhhhh----cCCCCCCCEEEEe-cCCCChh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH---G--YSVTTTVRSELDPEHRNSKDLSFLK----NLPGASERLRIFH-ADLSHPD   74 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~---g--~~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~Dl~d~~   74 (285)
                      .-+|+||||+|.||.+|+..+++-   |  .-+++.-.+.+       .....++    ++.  +.-+..+. .+.+  .
T Consensus         4 pirVlVtGAAGqI~ysll~~ia~G~vfG~dQPiiL~lLdi~-------~~~~~LegV~mELq--D~a~PlL~~Vvat--t   72 (332)
T KOG1496|consen    4 PIRVLVTGAAGQIGYSLLPMIARGIVFGKDQPIILHLLDIP-------PMMSVLEGVKMELQ--DCALPLLKGVVAT--T   72 (332)
T ss_pred             ceEEEeecccchhhHHHHHHHcCceeecCCCceEEEeeCCc-------hHHHHHHHHHHHHH--hhhhhHHHhhhcc--c
Confidence            358999999999999999988652   2  22333322220       0111111    110  00111111 1221  2


Q ss_pred             hHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      +-.+.|+++|+.|-..+.......+. .+.+..|+...+.=-.++.++. +-.+++.++-.+     +.+.....+..|.
T Consensus        73 d~~~afkdv~~ailvGa~PR~eGMER-kDll~~NvkIfk~Qg~AL~k~A~~~~KVlVVgNPa-----NTNali~~k~Aps  146 (332)
T KOG1496|consen   73 DEVEAFKDVDVAILVGAMPRREGMER-KDLLSANVKIFKSQGAALEKYAKPNVKVLVVGNPA-----NTNALILKKFAPS  146 (332)
T ss_pred             ChhhhhccCcEEEEeccccCcccchh-hhHHhhcceeehhhhHHHHHhcCCCceEEEecCcc-----ccchhHHhhhCCC
Confidence            23456778899998888777644444 4778888775544444443332 123444433211     1111111222211


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCC
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~  204 (285)
                              -|..+.-..++.--.+...+++.+.|+++.-+.--.|.|....
T Consensus       147 --------IP~kNfs~lTRLDhNRA~~QlA~klgv~~~~VkNviIWGNHSs  189 (332)
T KOG1496|consen  147 --------IPEKNFSALTRLDHNRALAQLALKLGVPVSDVKNVIIWGNHSS  189 (332)
T ss_pred             --------CchhcchhhhhhchhhHHHHHHHhhCCchhhcceeEEeccccc
Confidence                    1223445556666666777777777888877777777776433

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.33  E-value=0.015  Score=52.38  Aligned_cols=104  Identities=13%  Similarity=0.056  Sum_probs=65.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC-----------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-----------   72 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-----------   72 (285)
                      ...+|+|+|+ |-+|...+..+...|.+|+++++++        ++.+..+++     +.+++..|..+           
T Consensus       164 pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~--------~rle~aesl-----GA~~v~i~~~e~~~~~~gya~~  229 (509)
T PRK09424        164 PPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRP--------EVAEQVESM-----GAEFLELDFEEEGGSGDGYAKV  229 (509)
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCeEEEeccccccccccchhhh
Confidence            3579999999 9999999999989999999999987        555555555     33433333221           


Q ss_pred             ---h--hhHHHH----hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           73 ---P--DGFDAA----IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        73 ---~--~~~~~~----~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                         .  +...+.    .+++|+||.+++.....  .+  ..+      +...++.+++.   ..+|.++..
T Consensus       230 ~s~~~~~~~~~~~~~~~~gaDVVIetag~pg~~--aP--~li------t~~~v~~mkpG---gvIVdvg~~  287 (509)
T PRK09424        230 MSEEFIKAEMALFAEQAKEVDIIITTALIPGKP--AP--KLI------TAEMVASMKPG---SVIVDLAAE  287 (509)
T ss_pred             cchhHHHHHHHHHHhccCCCCEEEECCCCCccc--Cc--chH------HHHHHHhcCCC---CEEEEEccC
Confidence               1  111222    24699999999864431  11  110      12445555533   578888753

>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2

Probab=96.32  E-value=0.017  Score=50.59  Aligned_cols=68  Identities=16%  Similarity=0.169  Sum_probs=51.3

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GCT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d   84 (285)
                      ||+|.|+ |.+|..+++.+.+.|++|++++.++.        ....  ..     .-..+..|..|.+.+.++++  ++|
T Consensus         1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~~--------~~~~--~~-----ad~~~~~~~~d~~~l~~~~~~~~id   64 (380)
T TIGR01142         1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYAN--------APAM--QV-----AHRSYVINMLDGDALRAVIEREKPD   64 (380)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCC--------Cchh--hh-----CceEEEcCCCCHHHHHHHHHHhCCC
Confidence            5899997 99999999999999999999998761        0000  01     11345678889999988887  699


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      .|+-..
T Consensus        65 ~v~~~~   70 (380)
T TIGR01142        65 YIVPEI   70 (380)
T ss_pred             EEEecc
Confidence            988643

This enzyme is an alternative to PurN (TIGR00639)

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=96.31  E-value=0.014  Score=49.22  Aligned_cols=33  Identities=24%  Similarity=0.331  Sum_probs=30.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|.|+ |.+|+.++..|.+.|++|++++|+.
T Consensus         1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   33 (304)
T PRK06522          1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG   33 (304)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence            47999998 9999999999999999999999965

>PRK13302 putative L-aspartate dehydrogenase; Provisional

Probab=96.30  E-value=0.04  Score=45.80  Aligned_cols=73  Identities=19%  Similarity=0.121  Sum_probs=44.5

Q ss_pred             CCCC-CCeEEEecCCchhHHHHHHHHHHc--CCeEEEE-ecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhH
Q 023244            1 MEEG-KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGF   76 (285)
Q Consensus         1 M~~~-~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   76 (285)
                      |++| +++|.|.|. |.||+.+++.|.+.  ++++.++ +|++        ++...+.+..    +.      ..-..++
T Consensus         1 ~~~m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~dr~~--------~~a~~~a~~~----g~------~~~~~~~   61 (271)
T PRK13302          1 MSSRPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVAVRDP--------QRHADFIWGL----RR------PPPVVPL   61 (271)
T ss_pred             CCCCCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEECCCH--------HHHHHHHHhc----CC------CcccCCH
Confidence            5543 468999987 99999999999863  6787755 4544        2222222110    00      0011235


Q ss_pred             HHHhcCCCEEEEeccc
Q 023244           77 DAAIAGCTGVLHVATP   92 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~   92 (285)
                      +++++++|+|+-++..
T Consensus        62 eell~~~D~Vvi~tp~   77 (271)
T PRK13302         62 DQLATHADIVVEAAPA   77 (271)
T ss_pred             HHHhcCCCEEEECCCc
Confidence            5556778999987653

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.30  E-value=0.012  Score=52.05  Aligned_cols=72  Identities=15%  Similarity=0.154  Sum_probs=50.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++|+|+|+ |.+|..+++.|...| .+|++++|+.        ++...+ ....     ...+     +.+++.+.+.
T Consensus       179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~--------~ra~~la~~~g-----~~~i-----~~~~l~~~l~  239 (417)
T TIGR01035       179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTY--------ERAEDLAKELG-----GEAV-----KFEDLEEYLA  239 (417)
T ss_pred             cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHcC-----CeEe-----eHHHHHHHHh
Confidence            3579999998 999999999999998 7899999987        333322 2221     1111     2245667778


Q ss_pred             CCCEEEEecccCC
Q 023244           82 GCTGVLHVATPVD   94 (285)
Q Consensus        82 ~~d~vih~a~~~~   94 (285)
                      ++|+||.+.+...
T Consensus       240 ~aDvVi~aT~s~~  252 (417)
T TIGR01035       240 EADIVISSTGAPH  252 (417)
T ss_pred             hCCEEEECCCCCC
Confidence            8999999865433

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.30  E-value=0.0082  Score=49.88  Aligned_cols=76  Identities=20%  Similarity=0.234  Sum_probs=49.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCC-CCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +++++|.|| |..++.++..|++.| .+++++.|+.        ++.+.+.+... ....+.  ..++.+.+...    +
T Consensus       126 ~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~--------~ra~~La~~~~~~~~~~~--~~~~~~~~~~~----~  190 (283)
T COG0169         126 GKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTR--------ERAEELADLFGELGAAVE--AAALADLEGLE----E  190 (283)
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHHHhhhcccccc--ccccccccccc----c
Confidence            578999999 999999999999999 5799999987        45554443321 111111  12222222221    6


Q ss_pred             CCEEEEecccCCC
Q 023244           83 CTGVLHVATPVDF   95 (285)
Q Consensus        83 ~d~vih~a~~~~~   95 (285)
                      .|+|||+-.....
T Consensus       191 ~dliINaTp~Gm~  203 (283)
T COG0169         191 ADLLINATPVGMA  203 (283)
T ss_pred             cCEEEECCCCCCC
Confidence            8999998765443

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.018  Score=47.74  Aligned_cols=58  Identities=16%  Similarity=0.165  Sum_probs=47.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|+|-|..+|+.|+..|+++|..|++..+..                                  ..+.+..+++
T Consensus       158 ~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T----------------------------------~~l~~~~~~A  203 (285)
T PRK10792        158 YGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT----------------------------------KNLRHHVRNA  203 (285)
T ss_pred             CCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC----------------------------------CCHHHHHhhC
Confidence            478999999999999999999999999998876644                                  1266677889


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||..+|....
T Consensus       204 DIvi~avG~p~~  215 (285)
T PRK10792        204 DLLVVAVGKPGF  215 (285)
T ss_pred             CEEEEcCCCccc
Confidence            999998885443

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.017  Score=48.32  Aligned_cols=54  Identities=15%  Similarity=0.128  Sum_probs=45.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEe-cCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+|+|.|-++.+|+.++..|++.|+.|++.. |+.                                   .+.++.++
T Consensus       157 ~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~-----------------------------------~l~e~~~~  201 (296)
T PRK14188        157 SGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR-----------------------------------DLPAVCRR  201 (296)
T ss_pred             CCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC-----------------------------------CHHHHHhc
Confidence            579999999999999999999999999999884 432                                   14667778


Q ss_pred             CCEEEEeccc
Q 023244           83 CTGVLHVATP   92 (285)
Q Consensus        83 ~d~vih~a~~   92 (285)
                      +|+||-+.+.
T Consensus       202 ADIVIsavg~  211 (296)
T PRK14188        202 ADILVAAVGR  211 (296)
T ss_pred             CCEEEEecCC
Confidence            9999988774

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.29  E-value=0.017  Score=47.88  Aligned_cols=57  Identities=18%  Similarity=0.176  Sum_probs=46.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|.|+.+|+.|+..|.++|..|++.....                                  ..+.+.++++
T Consensus       157 ~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t----------------------------------~~l~~~~~~A  202 (285)
T PRK14189        157 RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT----------------------------------RDLAAHTRQA  202 (285)
T ss_pred             CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC----------------------------------CCHHHHhhhC
Confidence            578999999999999999999999999998764432                                  1255677889


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+||-.+|...
T Consensus       203 DIVV~avG~~~  213 (285)
T PRK14189        203 DIVVAAVGKRN  213 (285)
T ss_pred             CEEEEcCCCcC
Confidence            99998888433

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.25  E-value=0.013  Score=52.09  Aligned_cols=72  Identities=18%  Similarity=0.224  Sum_probs=50.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++|+|+|+ |.+|+.+++.|...|. +|++.+|+.        ++...+ ....          ++..+.+++.+.+.
T Consensus       181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~--------~ra~~la~~~g----------~~~~~~~~~~~~l~  241 (423)
T PRK00045        181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTL--------ERAEELAEEFG----------GEAIPLDELPEALA  241 (423)
T ss_pred             cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCH--------HHHHHHHHHcC----------CcEeeHHHHHHHhc
Confidence            4579999988 9999999999998897 788899876        333322 2221          12223355666777


Q ss_pred             CCCEEEEecccCC
Q 023244           82 GCTGVLHVATPVD   94 (285)
Q Consensus        82 ~~d~vih~a~~~~   94 (285)
                      ++|+||.+.+...
T Consensus       242 ~aDvVI~aT~s~~  254 (423)
T PRK00045        242 EADIVISSTGAPH  254 (423)
T ss_pred             cCCEEEECCCCCC
Confidence            8999999876433

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.24  E-value=0.013  Score=49.00  Aligned_cols=78  Identities=19%  Similarity=0.254  Sum_probs=48.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +|+++|.|| |..|++++..|++.|. +++++.|+.        ++.+.+.+. ............+   ...+.+....
T Consensus       127 ~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~--------~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~~~  194 (283)
T PRK14027        127 LDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT--------SRAQALADVINNAVGREAVVGVD---ARGIEDVIAA  194 (283)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH--------HHHHHHHHHHhhccCcceEEecC---HhHHHHHHhh
Confidence            578999999 9999999999999885 788899976        343333321 1100110111122   2223334467


Q ss_pred             CCEEEEecccCC
Q 023244           83 CTGVLHVATPVD   94 (285)
Q Consensus        83 ~d~vih~a~~~~   94 (285)
                      +|+|||+-....
T Consensus       195 ~divINaTp~Gm  206 (283)
T PRK14027        195 ADGVVNATPMGM  206 (283)
T ss_pred             cCEEEEcCCCCC
Confidence            899999875443

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.22  E-value=0.019  Score=50.51  Aligned_cols=66  Identities=17%  Similarity=-0.011  Sum_probs=46.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|+|+|. |.+|+.+++.|...|.+|+++++++        .+.......     .+.     +.   .++++++++
T Consensus       211 ~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp--------~ra~~A~~~-----G~~-----v~---~l~eal~~a  268 (425)
T PRK05476        211 AGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDP--------ICALQAAMD-----GFR-----VM---TMEEAAELG  268 (425)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCc--------hhhHHHHhc-----CCE-----ec---CHHHHHhCC
Confidence            4689999998 9999999999999999999999887        222111111     112     11   245667789


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||.+.+
T Consensus       269 DVVI~aTG  276 (425)
T PRK05476        269 DIFVTATG  276 (425)
T ss_pred             CEEEECCC
Confidence            99997654

>PRK07411 hypothetical protein; Validated

Probab=96.21  E-value=0.084  Score=46.34  Aligned_cols=110  Identities=15%  Similarity=0.134  Sum_probs=64.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCC--Ccccc---------Cccc----hhhhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSEL--DPEHR---------NSKD----LSFLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~--~~~~~---------~~~~----~~~~~~~~~~~~~~~~~~~   68 (285)
                      ..+|+|.|+ |.+|+++++.|+..|. ++++++.+..  ++..+         ...+    .+.+.++ +..-+++.+..
T Consensus        38 ~~~VlivG~-GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~-np~v~v~~~~~  115 (390)
T PRK07411         38 AASVLCIGT-GGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEI-NPYCQVDLYET  115 (390)
T ss_pred             cCcEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHH-CCCCeEEEEec
Confidence            468999999 8999999999999986 6777776421  11110         0001    1111111 12234555655


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .++. +...++++++|+||.+..       +..         .-..+-++|.+.+  +.+|+.+...
T Consensus       116 ~~~~-~~~~~~~~~~D~Vvd~~d-------~~~---------~r~~ln~~~~~~~--~p~v~~~~~g  163 (390)
T PRK07411        116 RLSS-ENALDILAPYDVVVDGTD-------NFP---------TRYLVNDACVLLN--KPNVYGSIFR  163 (390)
T ss_pred             ccCH-HhHHHHHhCCCEEEECCC-------CHH---------HHHHHHHHHHHcC--CCEEEEEEcc
Confidence            5554 346677889999997643       211         1123446666666  6777665544

>PRK13304 L-aspartate dehydrogenase; Reviewed

Probab=96.19  E-value=0.037  Score=45.84  Aligned_cols=66  Identities=17%  Similarity=0.130  Sum_probs=41.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc--CCeEEEE-ecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |+|.|.|+ |.+|+.+++.|.+.  +.++..+ +|++        ++...+.+..    ..       .-.+++++++.+
T Consensus         2 mrIgIIG~-G~iG~~ia~~l~~~~~~~elv~v~d~~~--------~~a~~~a~~~----~~-------~~~~~~~ell~~   61 (265)
T PRK13304          2 LKIGIVGC-GAIASLITKAILSGRINAELYAFYDRNL--------EKAENLASKT----GA-------KACLSIDELVED   61 (265)
T ss_pred             CEEEEECc-cHHHHHHHHHHHcCCCCeEEEEEECCCH--------HHHHHHHHhc----CC-------eeECCHHHHhcC
Confidence            58999997 99999999999875  4565544 4544        2222222210    11       112345555678


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      +|+|+.++.
T Consensus        62 ~DvVvi~a~   70 (265)
T PRK13304         62 VDLVVECAS   70 (265)
T ss_pred             CCEEEEcCC
Confidence            999998865

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.19  E-value=0.037  Score=45.79  Aligned_cols=104  Identities=13%  Similarity=0.077  Sum_probs=66.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~   80 (285)
                      .+.+++|+||+|-+|+-..+--.-+|++|+++.-+.        ++.+++.+.......     .|..+.   +.+.++.
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~--------eK~~~l~~~lGfD~~-----idyk~~d~~~~L~~a~  216 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGA--------EKCDFLTEELGFDAG-----IDYKAEDFAQALKEAC  216 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCH--------HHHHHHHHhcCCcee-----eecCcccHHHHHHHHC
Confidence            357999999999999986665555799999999887        777777763222222     233333   2333333


Q ss_pred             -cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeecc
Q 023244           81 -AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        81 -~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~  140 (285)
                       +++|+.+-|.|-          ..++       .+++.+..   ..|++.|+-++.|...
T Consensus       217 P~GIDvyfeNVGg----------~v~D-------Av~~~ln~---~aRi~~CG~IS~YN~~  257 (340)
T COG2130         217 PKGIDVYFENVGG----------EVLD-------AVLPLLNL---FARIPVCGAISQYNAP  257 (340)
T ss_pred             CCCeEEEEEcCCc----------hHHH-------HHHHhhcc---ccceeeeeehhhcCCC
Confidence             358999988772          2221       22333333   3599999988876443

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.18  E-value=0.029  Score=50.19  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=52.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+..+|+|+|+|+ |..|..+++.|.++|++|++.+....     . .....++..   ..++.++.+...+     ..+
T Consensus         1 ~~~~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~~-----~-~~~~~l~~~---~~gi~~~~g~~~~-----~~~   65 (445)
T PRK04308          1 MTFQNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAELK-----P-ERVAQIGKM---FDGLVFYTGRLKD-----ALD   65 (445)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC-----c-hhHHHHhhc---cCCcEEEeCCCCH-----HHH
Confidence            6666789999998 68999999999999999999987651     1 111222221   1255555554321     133


Q ss_pred             cCCCEEEEecccCC
Q 023244           81 AGCTGVLHVATPVD   94 (285)
Q Consensus        81 ~~~d~vih~a~~~~   94 (285)
                      .++|.||...|+..
T Consensus        66 ~~~d~vv~spgi~~   79 (445)
T PRK04308         66 NGFDILALSPGISE   79 (445)
T ss_pred             hCCCEEEECCCCCC
Confidence            57899999888753

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.18  E-value=0.018  Score=47.70  Aligned_cols=58  Identities=17%  Similarity=0.157  Sum_probs=46.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|-||.+|..++..|+++|+.|++. ++.                       .          ..+.+..+++
T Consensus       157 ~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~-~s~-----------------------t----------~~l~~~~~~A  202 (284)
T PRK14179        157 EGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT-HSR-----------------------T----------RNLAEVARKA  202 (284)
T ss_pred             CCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE-CCC-----------------------C----------CCHHHHHhhC
Confidence            57899999999999999999999999999887 222                       0          0256677889


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||-+.|....
T Consensus       203 DIVI~avg~~~~  214 (284)
T PRK14179        203 DILVVAIGRGHF  214 (284)
T ss_pred             CEEEEecCcccc
Confidence            999998886544

>cd01486 Apg7 Apg7 is an E1-like protein, that activates two different ubiquitin-like proteins, Apg12 and Apg8, and assigns them to specific E2 enzymes, Apg10 and Apg3, respectively

Probab=96.17  E-value=0.024  Score=47.24  Aligned_cols=31  Identities=19%  Similarity=0.280  Sum_probs=26.6

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (285)
                      +|+|.|+ |.+|+++++.|+..|. ++++++.+
T Consensus         1 kVLIvGa-GGLGs~vA~~La~aGVg~ItlvD~D   32 (307)
T cd01486           1 KCLLLGA-GTLGCNVARNLLGWGVRHITFVDSG   32 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHHcCCCeEEEECCC
Confidence            5899998 9999999999999986 67777753

This leads to the covalent conjugation of Apg8 with phosphatidylethanolamine, an important step in autophagy. Autophagy is a dynamic membrane phenomenon for bulk protein degradation in the lysosome/vacuole.

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=96.16  E-value=0.015  Score=49.01  Aligned_cols=33  Identities=15%  Similarity=0.201  Sum_probs=30.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|.|. |.+|+.+++.|++.|++|++.+|++
T Consensus         1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~   33 (298)
T TIGR00872         1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQ   33 (298)
T ss_pred             CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCH
Confidence            37999986 9999999999999999999999987

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	285
2p4h_X	322	Crystal Structure Of Vestitone Reductase From Alfal		1e-92
2c29_D	337	Structure Of Dihydroflavonol Reductase From Vitis V		7e-72
2rh8_A	338	Structure Of Apo Anthocyanidin Reductase From Vitis		8e-60
1y1p_A	342	X-Ray Structure Of Aldehyde Reductase With Nadph Le		1e-17
1ujm_A	342	Crystal Structure Of Aldehyde Reductase 2 From Spor		5e-17
1r6d_A	337	Crystal Structure Of Desiv Double Mutant (Dtdp-Gluc		3e-05
1r66_A	337	Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydr		5e-05
2p5u_A	311	Crystal Structure Of Thermus Thermophilus Hb8 Udp-G		9e-04

>pdb|2P4H|X Chain X, Crystal Structure Of Vestitone Reductase From Alfalfa (Medicago Sativa L.) Length = 322

Iteration: 1
 Score =  336 bits (861), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 160/281 (56%), Positives = 212/281 (75%), Gaps = 5/281 (1%)
Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           KGRVCVTGGTGF+ SW+I  LL++GYSV TT+R+  DPE +  +D+SFL NLPGASE+L 
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRA--DPERK--RDVSFLTNLPGASEKLH 56
Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
            F+ADLS+PD F AAI GC G+ H A+P+DF   EPEE++T+R ++G LGILK+C+ S T
Sbjct: 57  FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116
Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VKR +YTSS +AV +N KD D++DE+ WSDVD +R +  +G +YA+SKTL E+A LEF E
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE 176
Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
           ++G+D+VTLI   +VG F+CPK   S+  +L L+LG +E+ G +    MVHVDDVARAHI
Sbjct: 177 QNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIG-VTRFHMVHVDDVARAHI 235
Query: 245 FLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
           +LLE     GRY CS   + I+EM++ LSAKYPEY I TV+
Sbjct: 236 YLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVD 276

>pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337

Iteration: 1
 Score =  266 bits (681), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 133/278 (47%), Positives = 183/278 (65%), Gaps = 9/278 (3%)
Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VCVTG +GFI SWL+MRLL+ GY+V  TVR   DP   N K +  L +LP A   L ++ 
Sbjct: 8   VCVTGASGFIGSWLVMRLLERGYTVRATVR---DP--TNVKKVKHLLDLPKAETHLTLWK 62
Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC  + TV+R
Sbjct: 63  ADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRR 122
Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAALEFAEE 185
           +V+TSS   V   +  + + DE+ WSD+++ R  K+ +W   Y +SKTL E+AA ++A+E
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAW--MYFVSKTLAEQAAWKYAKE 180
Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
           + +D +T+IP++VVGPFI      S+ ++L+ I GN   Y  +     VH+DD+  AHI+
Sbjct: 181 NNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIY 240
Query: 246 LLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           L E P A+GRYICSSH   I ++A+ L  KYPEY IPT
Sbjct: 241 LFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPT 278

>pdb|2RH8|A Chain A, Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera Length = 338

Iteration: 1
 Score =  226 bits (577), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 182/295 (61%), Gaps = 27/295 (9%)
Query: 4   GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           GK   CV GGTGF+AS L+  LL  GY+V TTVR   DP+  N K +S L  L    + L
Sbjct: 8   GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVR---DPD--NQKKVSHLLELQELGD-L 61
Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
           +IF ADL+    F+A IAGC  V HVATPV F  ++PE  + + AI G + ++K+C ++ 
Sbjct: 62  KIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAK 121
Query: 124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIR--KLDSWGKSYAISKTLTERAA 179
           +VKRV+ TSS AAV  N  D    ++DE  W+D++++   K  +WG  Y  SKTL E+AA
Sbjct: 122 SVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWG--YPASKTLAEKAA 179
Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN--------- 230
            +FAEE+ +DL+T+IP+++ G  +      S+  +++LI GN     FL+N         
Sbjct: 180 WKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNE----FLINGMKGMQMLS 235
Query: 231 --TSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
              S+ HV+DV RAHIF+ E   A GRYIC +   ++ E+A+FLS +YP+Y +PT
Sbjct: 236 GSVSIAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPT 290

>pdb|1Y1P|A Chain A, X-Ray Structure Of Aldehyde Reductase With Nadph Length = 342

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 23/265 (8%)
Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG  GF+AS ++ +LL+HGY V  T RS     +   +   +    PG  E   +  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAKYPGRFETAVV-- 68
Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D+     +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++   + +VKR
Sbjct: 69  EDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAAATPSVKR 126
Query: 128 VVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS--------YAISKTLTER 177
            V TSS  +      +V+   +DE  W +++ I K  +  +S        YA SKT  E 
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185
Query: 178 AALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE---EYGFLLNTS 232
           AA +F +E+     L  ++P+  +G    P+      S   + L N E       +    
Sbjct: 186 AAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245
Query: 233 MVHVDDVARAHIFLLEYPDAKGRYI 257
            V   D+   H+  L  P  + R +
Sbjct: 246 YVSAVDIGLLHLGCLVLPQIERRRV 270

>pdb|1UJM|A Chain A, Crystal Structure Of Aldehyde Reductase 2 From Sporobolomyces Salmonicolor Aku4429 Length = 342

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 111/235 (47%), Gaps = 33/235 (14%)
Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTG  GF+AS ++ +LL+HGY V  T RS     +   +   +    PG  E   +  
Sbjct: 14  VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKR---WDAKYPGRFETAVV-- 68
Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D      +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++   + +VKR
Sbjct: 69  EDXLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAAATPSVKR 126
Query: 128 VVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS--------YAISKTLTER 177
            V TSS  +      +V+   +DE  W +++ I K  +  +S        YA SKT  E 
Sbjct: 127 FVLTSSTVSALIPKPNVEGIYLDEKSW-NLESIDKAKTLPESDPQKSLWVYAASKTEAEL 185
Query: 178 AALEFAEEHG--LDLVTLIPSMVVGPFICPK-------------FAGSVRSSLAL 217
           AA +F +E+     L  ++P+  +G    P+             F G V  +LAL
Sbjct: 186 AAWKFXDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWXXSLFNGEVSPALAL 240

>pdb|1R6D|A Chain A, Crystal Structure Of Desiv Double Mutant (Dtdp-Glucose 4,6- Dehydratase) From Streptomyces Venezuelae With Nad And Dau Bound Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 105/279 (37%), Gaps = 36/279 (12%)
Query: 7   RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG-----AS 60
           R+ VTGG GFI S  + +LL   Y  V       LD        L++  N        A 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD-------SLTYAGNRANLAPVDAD 54
Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSC 119
            RLR  H D+         + G   ++H A     +       V T+  + GT  +L+  
Sbjct: 55  PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCA 114
Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           + +G V RVV+ S+N            +D   W++   +         YA SK  ++  A
Sbjct: 115 VDAG-VGRVVHVSTNQV-------YGSIDSGSWTESSPLEP----NSPYAASKAGSDLVA 162
Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDD 238
             +   +GLD+         GP+  P+    +  +  L  G    YG   N    VH DD
Sbjct: 163 RAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222
Query: 239 VARAHIFLLEYPDAKGR-----YICSSHTLTIQEMAEFL 272
             R    +L    A GR     +I     LT +E+   L
Sbjct: 223 HCRGIALVL----AGGRAGEIYHIGGGLELTNRELTGIL 257

>pdb|1R66|A Chain A, Crystal Structure Of Desiv (Dtdp-Glucose 4,6-Dehydratase) From Streptomyces Venezuelae With Nad And Tyd Bound Length = 337

Iteration: 1
 Score = 45.1 bits (105), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 106/279 (37%), Gaps = 36/279 (12%)
Query: 7   RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG-----AS 60
           R+ VTGG GFI S  + +LL   Y  V       LD        L++  N        A 
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLD-------SLTYAGNRANLAPVDAD 54
Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDK-EPEEVITQRAINGTLGILKSC 119
            RLR  H D+         + G   ++H A     +       V T+  + GT  +L+  
Sbjct: 55  PRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCA 114
Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           + +G V RVV+ S+       D+    +D   W++   +         YA SK  ++  A
Sbjct: 115 VDAG-VGRVVHVST-------DEVYGSIDSGSWTESSPLEP----NSPYAASKAGSDLVA 162
Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDD 238
             +   +GLD+         GP+  P+    +  +  L  G    YG   N    VH DD
Sbjct: 163 RAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222
Query: 239 VARAHIFLLEYPDAKGR-----YICSSHTLTIQEMAEFL 272
             R    +L    A GR     +I     LT +E+   L
Sbjct: 223 HCRGIALVL----AGGRAGEIYHIGGGLELTNRELTGIL 257

>pdb|2P5U|A Chain A, Crystal Structure Of Thermus Thermophilus Hb8 Udp-Glucose 4- Epimerase Complex With Nad Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 92/252 (36%), Gaps = 33/252 (13%)
Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV VTGG GFI S ++  LL  G  V       LD      K  +  K +P        F
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAV-----LD-NLATGKRENVPKGVP-------FF 48
Query: 67  HADLSHPDGFDAAIA--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
             DL   +G + A      T V H A     +    + V+           L    +   
Sbjct: 49  RVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG 108
Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           V+++V+ S+  A++    + +  +ET+                YA SK   E     + +
Sbjct: 109 VEKLVFASTGGAIYGEVPEGERAEETWPPRPK---------SPYAASKAAFEHYLSVYGQ 159
Query: 185 EHGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREEYG-FLLNTSMVH 235
            +GL  V+L    V GP   P         FA  V   L + L  R+  G        V+
Sbjct: 160 SYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVY 219
Query: 236 VDDVARAHIFLL 247
           V DVA AH   L
Sbjct: 220 VGDVAEAHALAL 231

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	285
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	1e-150
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	1e-148
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	1e-139
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	1e-114
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	3e-63
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	5e-61
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	2e-26
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	1e-24
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	4e-24
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	1e-23
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	9e-23
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	1e-22
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	1e-21
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	6e-21
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	9e-21
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	1e-20
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	1e-19
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	1e-19
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	2e-19
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	2e-19
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	1e-18
1xq6_A	253	Unknown protein; structural genomics, protein stru	1e-17
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	1e-17
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	2e-17
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	2e-17
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	4e-16
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	7e-16
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	8e-16
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	9e-16
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	1e-15
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	2e-15
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	3e-15
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	6e-15
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	2e-14
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	2e-14
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	3e-14
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	3e-14
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	5e-14
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	1e-13
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	1e-13
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	2e-13
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	3e-13
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	2e-12
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	6e-12
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	1e-11
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	2e-11
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	3e-11
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	1e-10
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	1e-10
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	2e-10
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	1e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	5e-09
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	6e-09
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	2e-07
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	3e-07
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	7e-07
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	1e-06
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	6e-06
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	1e-04
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	3e-04
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	7e-04

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322

 Score =  422 bits (1087), Expect = e-150
 Identities = 157/281 (55%), Positives = 210/281 (74%), Gaps = 5/281 (1%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           KGRVCVTGGTGF+ SW+I  LL++GYSV TT+R++ +      +D+SFL NLPGASE+L 
Sbjct: 1   KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPE----RKRDVSFLTNLPGASEKLH 56

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
            F+ADLS+PD F AAI GC G+ H A+P+DF   EPEE++T+R ++G LGILK+C+ S T
Sbjct: 57  FFNADLSNPDSFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT 116

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VKR +YTSS +AV +N KD D++DE+ WSDVD +R +  +G +YA+SKTL E+A LEF E
Sbjct: 117 VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGE 176

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
           ++G+D+VTLI   +VG F+CPK   S+  +L L+LG +E+ G +    MVHVDDVARAHI
Sbjct: 177 QNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIG-VTRFHMVHVDDVARAHI 235

Query: 245 FLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
           +LLE     GRY CS   + I+EM++ LSAKYPEY I TV+
Sbjct: 236 YLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVD 276

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337

 Score =  416 bits (1072), Expect = e-148
 Identities = 129/283 (45%), Positives = 178/283 (62%), Gaps = 5/283 (1%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M      VCVTG +GFI SWL+MRLL+ GY+V  TVR   +      K +  L +LP A 
Sbjct: 1   MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNV-----KKVKHLLDLPKAE 55

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
             L ++ ADL+    FD AI GCTGV HVATP+DFE K+PE  + +  I G LGI+KSC 
Sbjct: 56  THLTLWKADLADEGSFDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCA 115

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            + TV+R+V+TSS   V   +  + + DE+ WSD+++ R        Y +SKTL E+AA 
Sbjct: 116 AAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAW 175

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           ++A+E+ +D +T+IP++VVGPFI      S+ ++L+ I GN   Y  +     VH+DD+ 
Sbjct: 176 KYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLC 235

Query: 241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            AHI+L E P A+GRYICSSH   I ++A+ L  KYPEY IPT
Sbjct: 236 NAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPT 278

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338

 Score =  395 bits (1018), Expect = e-139
 Identities = 118/291 (40%), Positives = 172/291 (59%), Gaps = 15/291 (5%)

Query: 2   EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
             GK   CV GGTGF+AS L+  LL  GY+V TTVR   +      K +S L  L    +
Sbjct: 6   PIGKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQ-----KKVSHLLELQELGD 60

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
            L+IF ADL+    F+A IAGC  V HVATPV F  ++PE  + + AI G + ++K+C +
Sbjct: 61  -LKIFRADLTDELSFEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTR 119

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
           + +VKRV+ TSS AAV  N  D    ++DE  W+D++++         Y  SKTL E+AA
Sbjct: 120 AKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAEKAA 179

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-------S 232
            +FAEE+ +DL+T+IP+++ G  +      S+  +++LI GN      +          S
Sbjct: 180 WKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVS 239

Query: 233 MVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
           + HV+DV RAHIF+ E   A GRYIC +   ++ E+A+FLS +YP+Y +PT
Sbjct: 240 IAHVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPT 290

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342

 Score =  331 bits (851), Expect = e-114
 Identities = 77/298 (25%), Positives = 120/298 (40%), Gaps = 23/298 (7%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           + EG   V VTG  GF+AS ++ +LL+HGY V  T RS     +     L    +     
Sbjct: 8   LPEGS-LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-----LQKRWDAKYPG 61

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
                   D+     +D  I G  GV H+A+ V F +K  +EV+T  AI GTL  L++  
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKY-DEVVTP-AIGGTLNALRAAA 119

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKS-------YAIS 171
            + +VKR V TSS  +      +V+   +DE  W+     +               YA S
Sbjct: 120 ATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS 179

Query: 172 KTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAG--SVRSSLALILGNREEY-G 226
           KT  E AA +F +E+     L  ++P+  +G    P+     +    ++L  G       
Sbjct: 180 KTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA 239

Query: 227 FLLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            +     V   D+   H+  L  P  +  R   ++ T     +       YP    P 
Sbjct: 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA 297

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342

 Score =  201 bits (513), Expect = 3e-63
 Identities = 53/283 (18%), Positives = 101/283 (35%), Gaps = 36/283 (12%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           +  V G TG +       +   G+ +    R         S  +  L  L          
Sbjct: 15  KYAVLGATGLLGHHAARAIRAAGHDLVLIHRP--------SSQIQRLAYLE-----PECR 61

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
            A++    G + A+ G  GV+  A       +  +E +   A+  T     +CL++  V 
Sbjct: 62  VAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEV-ASALGQTNPFYAACLQAR-VP 119

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           R++Y  S  A+  + + +    E  + D      L S   SY + K   +  A E A   
Sbjct: 120 RILYVGSAYAMPRHPQGLP-GHEGLFYD-----SLPSGKSSYVLCKWALDEQAREQARN- 172

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN--REEYGFLLN--TSMVHVDDVARA 242
           GL +V  IP MV+G          +  +   ++      E    +    +++   +  R 
Sbjct: 173 GLPVVIGIPGMVLGE-------LDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGRG 225

Query: 243 HIFLLEYPDAKGRYICSSHTLTIQEMAEFLSA---KYPEYPIP 282
            +  LE      RY+ + H L + ++   ++    +    P+ 
Sbjct: 226 LLMALERGRIGERYLLTGHNLEMADLTRRIAELLGQPAPQPMS 268

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227

 Score =  191 bits (488), Expect = 5e-61
 Identities = 55/269 (20%), Positives = 94/269 (34%), Gaps = 45/269 (16%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           ME+ K ++ + G +GF+ S L+   L+ G+ VT  VR    PE            +   +
Sbjct: 1   MEKVK-KIVLIGASGFVGSALLNEALNRGFEVTAVVR---HPE-----------KIKIEN 45

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           E L++  AD+S  D       G   V+    P  + + +  +      I   L I+    
Sbjct: 46  EHLKVKKADVSSLDEVCEVCKGADAVISAFNPG-WNNPDIYDE----TIKVYLTIIDGVK 100

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+G V R +      ++F     + +MD     +                 K L E    
Sbjct: 101 KAG-VNRFLMVGGAGSLFIAP-GLRLMDSGEVPE-----------NILPGVKALGEFYLN 147

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
              +E  +D V   P+  + P         VR+    +  +      ++  S + V+D A
Sbjct: 148 FLMKEKEIDWVFFSPAADMRP--------GVRTGRYRLGKDDMIVD-IVGNSHISVEDYA 198

Query: 241 RAHIFLLEYPDAKGRYIC---SSHTLTIQ 266
            A I  LE+P             H     
Sbjct: 199 AAMIDELEHPKHHQERFTIGYLEHHHHHH 227

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317

 Score =  104 bits (262), Expect = 2e-26
 Identities = 54/287 (18%), Positives = 110/287 (38%), Gaps = 42/287 (14%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTG +G I + L+  L +             D              +   +  ++   
Sbjct: 2   ILVTGSSGQIGTELVPYLAEKYGKKNVIA---SD-------------IVQRDTGGIKFIT 45

Query: 68  ADLSHPDGFDAAIA--GCTGVLHVATPVDFE-DKEPEEVITQRA-INGTLGILKSCLKSG 123
            D+S+ D  D A+       + H+A  +  + +K+P   +  +  +NGT  IL++  +  
Sbjct: 46  LDVSNRDEIDRAVEKYSIDAIFHLAGILSAKGEKDPA--LAYKVNMNGTYNILEAAKQHR 103

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            V++VV  S+   VF  +   + +          I +  +    + ++K   E     + 
Sbjct: 104 -VEKVVIPST-IGVFGPETPKNKVPS------ITITRPRT---MFGVTKIAAELLGQYYY 152

Query: 184 EEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGNREEYGFLLNTS----MVHVDD 238
           E+ GLD+ +L    ++     P          +      RE+Y   L  +    M+++ D
Sbjct: 153 EKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPD 212

Query: 239 VARAHIFLLEYPDAKGR----YICSSHTLTIQEMAEFLSAKYPEYPI 281
             +A + L E    K      Y  +++T T  E+   +  + PE+ I
Sbjct: 213 ALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEI 259

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267

 Score = 98.6 bits (246), Expect = 1e-24
 Identities = 41/196 (20%), Positives = 68/196 (34%), Gaps = 32/196 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTG  G +   +  RL      +     S LDP                        
Sbjct: 5   RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAG----------------PNEECV 48

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             DL+  +  +A +AGC G++H+    V+    +P E I Q  I G   + ++    G  
Sbjct: 49  QCDLADANAVNAMVAGCDGIVHLGGISVE----KPFEQILQGNIIGLYNLYEAARAHG-Q 103

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            R+V+ SSN         +    +T     D   + D     Y +SK   E  A  + ++
Sbjct: 104 PRIVFASSNHT-------IGYYPQTERLGPDVPARPDG---LYGVSKCFGENLARMYFDK 153

Query: 186 HGLDLVTLIPSMVVGP 201
            G +   +        
Sbjct: 154 FGQETALVRIGSCTPE 169

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377

 Score = 99.3 bits (248), Expect = 4e-24
 Identities = 54/288 (18%), Positives = 92/288 (31%), Gaps = 39/288 (13%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
            V V GG GF+ S L+ RLL+ G +    V   +D       +L      N+P     +R
Sbjct: 34  NVMVVGGAGFVGSNLVKRLLELGVN---QVHV-VD-------NLLSAEKINVPD-HPAVR 81

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKS 122
                ++      +       V H+AT         +P     +     TL + +     
Sbjct: 82  FSETSITDDALLASLQDEYDYVFHLATYHGNQSSIHDPLADH-ENNTLTTLKLYERLKHF 140

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAALE 181
             +K+VVY+++           D         V           S Y++SK   E  ++ 
Sbjct: 141 KRLKKVVYSAA-GCSIAEKTFDDAKATEETDIVSLHNND-----SPYSMSKIFGEFYSVY 194

Query: 182 FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG----------NREE---YGFL 228
           + ++H L  V      V GP           +   +                        
Sbjct: 195 YHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGG 254

Query: 229 LNT-SMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSA 274
           + T   + V+DVA   I         G Y I S    +I ++A  ++ 
Sbjct: 255 VATRDFIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINE 302

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267

 Score = 95.8 bits (239), Expect = 1e-23
 Identities = 37/196 (18%), Positives = 65/196 (33%), Gaps = 32/196 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTG  G + S +   L    + V  +    +D                       I 
Sbjct: 4   RLLVTGAAGGVGSAIRPHLGTLAHEVRLSDI--VDLGAAE--------------AHEEIV 47

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
             DL+        +  C G++H+    V+     P   I Q  I G   + ++    G  
Sbjct: 48  ACDLADAQAVHDLVKDCDGIIHLGGVSVE----RPWNDILQANIIGAYNLYEAARNLG-K 102

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            R+V+ SSN  + Y  +           D +  R+ DS    Y +SK   E  A  +  +
Sbjct: 103 PRIVFASSNHTIGYYPRTT-------RIDTEVPRRPDS---LYGLSKCFGEDLASLYYHK 152

Query: 186 HGLDLVTLIPSMVVGP 201
             ++ + +        
Sbjct: 153 FDIETLNIRIGSCFPK 168

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333

 Score = 95.0 bits (237), Expect = 9e-23
 Identities = 59/279 (21%), Positives = 99/279 (35%), Gaps = 54/279 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           +V +TG  G I S +   LL+ G  V       +D       + +    ++L      L 
Sbjct: 23  KVFITGICGQIGSHIAELLLERGDKVVG-----ID-------NFATGRREHLKD-HPNLT 69

Query: 65  IFHADLSHPDGFDAAIAGC--TGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCL 120
                ++     +  I       V+H A        +P++       N  G   ++++  
Sbjct: 70  FVEGSIADHALVNQLIGDLQPDAVVHTAASYK----DPDDWYNDTLTNCVGGSNVVQAAK 125

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           K+  V R VY  + A  +        +              +S   SYAISK+  E    
Sbjct: 126 KNN-VGRFVYFQT-ALCYGVKPIQQPVRLD-----HPRNPANS---SYAISKSANED--- 172

Query: 181 EFAEEHGLDLVTLIPSMVVGPF----ICPKFAGSVRSSLALILGN--REEYGFLLNTSMV 234
            + E  GLD VT   + VVGP       P F   +       +    R+   F      V
Sbjct: 173 -YLEYSGLDFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRD---F------V 222

Query: 235 HVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFL 272
            V D+ARA +  ++     G Y   S   + I+E+ + +
Sbjct: 223 FVKDLARATVRAVDGV-GHGAYHFSSGTDVAIKELYDAV 260

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311

 Score = 94.2 bits (235), Expect = 1e-22
 Identities = 46/281 (16%), Positives = 95/281 (33%), Gaps = 58/281 (20%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPE--HRNSKDLSFLKNLPGA 59
           ++ VTGGTGF+  +++  + + G +          ++  D E    +      +  L   
Sbjct: 4   KIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYTLEDLINQLNDV 63

Query: 60  SERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSC 119
                + H          AA             +     E  +         T  +  +C
Sbjct: 64  D---AVVHL---------AATR------GSQGKIS----EFHD-----NEILTQNLYDAC 96

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
            ++  +  +VY S+  +  Y+D+     +E      D +         Y +SK   E   
Sbjct: 97  YENN-ISNIVYAST-ISA-YSDETSLPWNEKELPLPDLM---------YGVSKLACEHIG 144

Query: 180 LEFAEEHGLDLVTLIPSMVVGPF-----ICPKFAGSVRSSLALILGNREEYGFLLNT-SM 233
             ++ + GL +  L  + + G       +  +F         L L     +   +     
Sbjct: 145 NIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTL-----HANSVAKREF 199

Query: 234 VHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLS 273
           ++  D A++ I+ L+     G + I S   LT  E+A  ++
Sbjct: 200 LYAKDAAKSVIYALKQEKVSGTFNIGSGDALTNYEVANTIN 240

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311

 Score = 91.4 bits (228), Expect = 1e-21
 Identities = 68/281 (24%), Positives = 110/281 (39%), Gaps = 46/281 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           RV VTGG GFI S ++  LL  G  V       LD       +L+    +N+P   + + 
Sbjct: 2   RVLVTGGAGFIGSHIVEDLLARGLEVAV-----LD-------NLATGKRENVP---KGVP 46

Query: 65  IFHADLSHPDGFDAAIAGC--TGVLHVATPVDFED--KEPEEVITQRA-INGTLGILKSC 119
            F  DL   +G + A      T V H A     +   ++P         + G L +L++C
Sbjct: 47  FFRVDLRDKEGVERAFREFRPTHVSHQAAQASVKVSVEDPVL--DFEVNLLGGLNLLEAC 104

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
            + G V+++V+ S+  A++    + +  +E       +  +  S    YA SK   E   
Sbjct: 105 RQYG-VEKLVFASTGGAIYGEVPEGERAEE------TWPPRPKS---PYAASKAAFEHYL 154

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE---YGFLLNTS---- 232
             + + +GL  V+L    V GP   P     V +  A  +        Y           
Sbjct: 155 SVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCV 214

Query: 233 --MVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAE 270
              V+V DVA AH   L   +  G Y + +    T +E+  
Sbjct: 215 RDYVYVGDVAEAHALALFSLE--GIYNVGTGEGHTTREVLM 253

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313

 Score = 89.5 bits (223), Expect = 6e-21
 Identities = 61/277 (22%), Positives = 107/277 (38%), Gaps = 44/277 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
            + VTGG GFI S ++ +L +    +       +D       +LS    + +    E  R
Sbjct: 3   LIVVTGGAGFIGSHVVDKLSE-SNEIVV-----ID-------NLSSGNEEFVN---EAAR 46

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           +  ADL+  D     + G   V H+A    V    + P+E+  +  +  T  +L++  K+
Sbjct: 47  LVKADLAADD-IKDYLKGAEEVWHIAANPDVRIGAENPDEIY-RNNVLATYRLLEAMRKA 104

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G V R+V+TS+ + V Y +  V    E      DY     S    Y  SK   E     +
Sbjct: 105 G-VSRIVFTST-STV-YGEAKVIPTPE------DYPTHPIS---LYGASKLACEALIESY 152

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREE---YGFLLNT-SMVHVD 237
                +       + V+G     +    V     + +  N EE    G      S +++ 
Sbjct: 153 CHTFDMQAWIYRFANVIGR----RSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYIS 208

Query: 238 DVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLS 273
           D   A +F L   +    + I S   + ++ +AE + 
Sbjct: 209 DCVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVC 245

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321

 Score = 89.1 bits (222), Expect = 9e-21
 Identities = 56/290 (19%), Positives = 84/290 (28%), Gaps = 69/290 (23%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           R+ +TGG GFI   L   L+  G  VT      LD       DL    +    G      
Sbjct: 9   RILITGGAGFIGGHLARALVASGEEVTV-----LD-------DLRVPPMIPPEGT----- 51

Query: 65  IFHADLSHPDGFD---AAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSC 119
                       +     ++    V H+A+   V    K+P +      ++    +L  C
Sbjct: 52  ---GKFLEKPVLELEERDLSDVRLVYHLASHKSVPRSFKQPLD--YLDNVDSGRHLLALC 106

Query: 120 LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA 179
              G V +VV  S+   V Y   D     E         R        YA SK   E  A
Sbjct: 107 TSVG-VPKVVVGST-CEV-YGQADTLPTPED---SPLSPRSP------YAASKVGLEMVA 154

Query: 180 LEFAEEHGLDLVTLI-----------PSMVVGPFICPKFAGSVRSSLALILGNREE--YG 226
                      V ++           P  +V                A +L   E    G
Sbjct: 155 GAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLC------------ANLLTRNELPVEG 202

Query: 227 FLLNT-SMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSA 274
                    ++ DV    + L   P         S  +L++ ++   L A
Sbjct: 203 DGEQRRDFTYITDVVDKLVALANRPLP-SVVNFGSGQSLSVNDVIRILQA 251

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221

 Score = 87.0 bits (215), Expect = 1e-20
 Identities = 30/249 (12%), Positives = 76/249 (30%), Gaps = 44/249 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG   S ++    + G+ VT  VR   +              +    + + I 
Sbjct: 2   KIGIIGATGRAGSRILEEAKNRGHEVTAIVR---NAGK-----------ITQTHKDINIL 47

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D+   D   + ++    V+        E ++               ++     +    
Sbjct: 48  QKDIF--DLTLSDLSDQNVVVDAYGISPDEAEKHVT--------SLDHLISVLNGTV-SP 96

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           R++     A++  ++    +++     +  Y     +  K     K          + + 
Sbjct: 97  RLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK----------SHQA 146

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFL 246
                 + PS +  P    +  G  +     +L   +        S + ++D A A +  
Sbjct: 147 EFSWTYISPSAMFEP---GERTGDYQIGKDHLLFGSD------GNSFISMEDYAIAVLDE 197

Query: 247 LEYPDAKGR 255
           +E P+    
Sbjct: 198 IERPNHLNE 206

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 86.6 bits (215), Expect = 1e-19
 Identities = 61/296 (20%), Positives = 98/296 (33%), Gaps = 50/296 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            + VTGG GFI S ++  L D G +    V    D     +K      NL   +    + 
Sbjct: 48  MIIVTGGAGFIGSNIVKALNDKGITDILVV----DNLKDGTK----FVNLVDLNIADYMD 99

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D                + H      T     D +    +       +  +L  CL+ 
Sbjct: 100 KEDFLIQIMAGEEFGDVEAIFHEGACSSTTE--WDGKY---MMDNNYQYSKELLHYCLER 154

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
                 +Y SS AA  Y  +  D ++       +Y + L+     +  SK L +    + 
Sbjct: 155 E--IPFLYASS-AAT-YGGRTSDFIESR-----EYEKPLN----VFGYSKFLFDEYVRQI 201

Query: 183 AEEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGNREE----YG-------FLLN 230
             E    +V      V GP    K    SV   L   L N E      G       F   
Sbjct: 202 LPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF--- 258

Query: 231 TSMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
              V+V DVA  +++ LE     G + + +    + Q +A+   A + +  I  + 
Sbjct: 259 ---VYVGDVADVNLWFLEN-GVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIP 310

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312

 Score = 85.7 bits (213), Expect = 1e-19
 Identities = 57/289 (19%), Positives = 100/289 (34%), Gaps = 64/289 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           R+ VTGG GFI S L+ +L++ GY V       +D       +LS    + +        
Sbjct: 2   RIVVTGGAGFIGSHLVDKLVELGYEVVV-----VD-------NLSSGRREFVN---PSAE 46

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFED--KEPEEVITQRAINGTLGILKSCLKS 122
           +   DL        A      V H A   +      EP        +  T  +L+   ++
Sbjct: 47  LHVRDLKDYSWG--AGIKGDVVFHFAANPEVRLSTTEPIVHF-NENVVATFNVLEWARQT 103

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G V+ VV+ SS + V Y D DV    E      +   K  S    Y  +K   E     +
Sbjct: 104 G-VRTVVFASS-STV-YGDADVIPTPE------EEPYKPIS---VYGAAKAAGEVMCATY 151

Query: 183 AEEHGLDLVTLIPSMVVGPF----ICPKFAGSVRSSLALILGNREE--YG-------FLL 229
           A   G+  + +  + VVGP     +   F       + L          G       +  
Sbjct: 152 ARLFGVRCLAVRYANVVGPRLRHGVIYDFI------MKLRRNPNVLEVLGDGTQRKSY-- 203

Query: 230 NTSMVHVDDVARAHIFLLEYPDAKGRY-----ICSSHTLTIQEMAEFLS 273
               ++V D   A +   +  +          + +   + + ++A+ ++
Sbjct: 204 ----LYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVA 248

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 Length = 310

 Score = 84.9 bits (211), Expect = 2e-19
 Identities = 62/295 (21%), Positives = 99/295 (33%), Gaps = 50/295 (16%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           + VTGG GFI S ++  L D G +    V    D     +K      NL   +    +  
Sbjct: 2   IIVTGGAGFIGSNIVKALNDKGITDILVV----DNLKDGTK----FVNLVDLNIADYMDK 53

Query: 68  ADLSHPDGFDAAIAGCTGVLHVA----TPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
            D                + H      T     D +    +       +  +L  CL+  
Sbjct: 54  EDFLIQIMAGEEFGDVEAIFHEGACSSTTE--WDGKY---MMDNNYQYSKELLHYCLERE 108

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
                +Y SS AA  Y  +  D ++       +Y + L+     Y  SK L +    +  
Sbjct: 109 I--PFLYASS-AAT-YGGRTSDFIESR-----EYEKPLN----VYGYSKFLFDEYVRQIL 155

Query: 184 EEHGLDLVTLIPSMVVGPFICPK-FAGSVRSSLALILGNREE----YG-------FLLNT 231
            E    +V      V GP    K    SV   L   L N E      G       F    
Sbjct: 156 PEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDF---- 211

Query: 232 SMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
             V+V DVA  +++ LE   + G + + +    + Q +A+   A + +  I  + 
Sbjct: 212 --VYVGDVADVNLWFLENGVS-GIFNLGTGRAESFQAVADATLAYHKKGQIEYIP 263

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379

 Score = 85.9 bits (213), Expect = 2e-19
 Identities = 51/282 (18%), Positives = 99/282 (35%), Gaps = 35/282 (12%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
             E   ++ +TG  GFIAS +  RL   G+ V  +             D    +++    
Sbjct: 26  PSENL-KISITGAGGFIASHIARRLKHEGHYVIAS-------------DWKKNEHMTEDM 71

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPV---DFEDKEPEEVITQRAINGTLGILK 117
                   DL   +       G   V ++A  +    F       ++    +  +  +++
Sbjct: 72  FCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM-ISFNMIE 130

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET--FWSDVDYIRKLDSWGKSYAISKTLT 175
           +   +G +KR  Y SS A + Y +             SD  +  +       + + K  T
Sbjct: 131 AARING-IKRFFYASS-ACI-YPEFKQLETTNVSLKESDA-WPAEPQDA---FGLEKLAT 183

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI---LGNREE---YGFLL 229
           E     + ++ G++        + GPF   K  G  ++  A       + +    +G  L
Sbjct: 184 EELCKHYNKDFGIECRIGRFHNIYGPFGTWK-GGREKAPAAFCRKAQTSTDRFEMWGDGL 242

Query: 230 NT-SMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAE 270
            T S   +D+     + L +    +   I S   +++ EMAE
Sbjct: 243 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE 284

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352

 Score = 83.5 bits (207), Expect = 1e-18
 Identities = 58/296 (19%), Positives = 101/296 (34%), Gaps = 51/296 (17%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           +        +TG  GFI S L+  LL     V           H+ + D           
Sbjct: 23  LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVV--GLDNFATGHQRNLDEVRSLVSEKQW 80

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRA-INGTLGILK 117
              +    D+ + D  + A AG   VLH A    V     +P    +    I+G L +L 
Sbjct: 81  SNFKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPIT--SNATNIDGFLNMLI 138

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
           +   +  V+   Y +S ++  Y D       E      D I K  S    YA++K + E 
Sbjct: 139 AARDAK-VQSFTYAAS-SST-YGDHPGLPKVE------DTIGKPLS---PYAVTKYVNEL 186

Query: 178 AALEFAEEHGLDLVTL----------IPSMVVGPFICPKFAGSVRSSLALILGNREEYG- 226
            A  F+  +G   + L           P+      I PK+  S+     + +      G 
Sbjct: 187 YADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVI-PKWTSSMIQGDDVYI-----NGD 240

Query: 227 ------FLLNTSMVHVDDVARAHIFLLEYP-DAKGR-Y-ICSSHTLTIQEMAEFLS 273
                 F       ++++  +A++       DA+ + Y I      ++ ++   L 
Sbjct: 241 GETSRDF------CYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALR 290

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253

 Score = 79.5 bits (196), Expect = 1e-17
 Identities = 42/286 (14%), Positives = 81/286 (28%), Gaps = 64/286 (22%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASE 61
               V VTG +G     +  +L +    +     VRS               + + G ++
Sbjct: 3   NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA-----------QGKEKIGGEAD 51

Query: 62  RLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN----------- 110
              +F  D++  D  + A  G   ++ + + V       +     R              
Sbjct: 52  ---VFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQV 108

Query: 111 ---GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS 167
              G    + +   +G VK +V   S       + D  +                    +
Sbjct: 109 DWIGQKNQIDAAKVAG-VKHIVVVGSMGG---TNPDHPLNKLGNG--------------N 150

Query: 168 YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF 227
             + K   E+       + G     +                       L++G  +E   
Sbjct: 151 ILVWKRKAEQY----LADSGTPYTIIRAGG---------LLDKEGGVRELLVGKDDELLQ 197

Query: 228 LLNTSMVHVDDVARAHIFLLEYPDAKGR-Y-ICSSHTLTIQEMAEF 271
             +T  V   DVA   I  L + +AK + + + S    T     +F
Sbjct: 198 -TDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDF 242

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206

 Score = 78.1 bits (193), Expect = 1e-17
 Identities = 36/249 (14%), Positives = 72/249 (28%), Gaps = 56/249 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG      + + +  GY VT  VR   D     S+                + 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVR---DSSRLPSE----------GPRPAHVV 51

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D+      D  +AG   V+ +    +  D  P  V+++ A N    I+ +    G V 
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRN--DLSPTTVMSEGARN----IVAAMKAHG-VD 104

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           +VV  +S   ++   K    +                  ++             +   E 
Sbjct: 105 KVVACTSAFLLWDPTKVPPRL------------------QAVTDDH----IRMHKVLRES 142

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFL 246
           GL  V ++P                 +    +  +           ++   D+    +  
Sbjct: 143 GLKYVAVMPPH---------IGDQPLTGAYTVTLDGRGPS-----RVISKHDLGHFMLRC 188

Query: 247 LEYPDAKGR 255
           L   +  G 
Sbjct: 189 LTTDEYDGH 197

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342

 Score = 80.1 bits (198), Expect = 2e-17
 Identities = 54/304 (17%), Positives = 87/304 (28%), Gaps = 53/304 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS-----ELDPEHRNSKDLSFLKNLPGASE 61
            + + G  G +   L  RL+  G      V          PE              G S 
Sbjct: 16  HIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAP-----------AGFSG 64

Query: 62  RLRIFHADLSHPDGFDAAI-AGCTGVLHVATPVDFE-DKEPEEVITQRAIN--GTLGILK 117
            +    ADLS P   +  + A    + H+A  V  E + + +       IN  GT  +  
Sbjct: 65  AVDARAADLSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFD---KGYRINLDGTRYLFD 121

Query: 118 SC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
           +      K G   RVV+TSS  AVF       + DE   + +           SY   K 
Sbjct: 122 AIRIANGKDGYKPRVVFTSS-IAVFGAPLPYPIPDEFHTTPLT----------SYGTQKA 170

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-----LGNREEYGFL 228
           + E    +++     D + +    +      P    +  S          L  +E    +
Sbjct: 171 ICELLLSDYSRRGFFDGIGIRLPTICIR---PGKPNAAASGFFSNILREPLVGQEAVLPV 227

Query: 229 ---LNTSMVHVDDVARAHIFLLEYPDAKGR----YICSSHTLTIQEMAEFLSAKYPEYPI 281
              +              I        K            + T+ E  E L     E  +
Sbjct: 228 PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAV 287

Query: 282 PTVE 285
             + 
Sbjct: 288 ALIR 291

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478

 Score = 80.7 bits (199), Expect = 2e-17
 Identities = 58/321 (18%), Positives = 96/321 (29%), Gaps = 51/321 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTV------RSELDPEHR-----NSKDLSFLKN 55
            V +TG TGF+  +L++ LL     V   +       S+ D   R     +S D   L++
Sbjct: 75  TVLLTGATGFLGRYLVLELLRRL-DVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRH 133

Query: 56  L-PGASERLRIFHADLSHPD-GFDAA-----IAGCTGVLHVATPVDFEDKEPEEVITQRA 108
               A++RL +   D S PD G D             ++  A  V+              
Sbjct: 134 FKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNAFPYH-----ELFG 188

Query: 109 IN--GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK 166
            N  GT  +++  L +  +K   Y S+       +      D               W  
Sbjct: 189 PNVAGTAELIRIAL-TTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAG 247

Query: 167 SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP----FICPK---FAGSVRSSLAL-- 217
            Y  SK   E    E  +   L +      M++                  V S +A   
Sbjct: 248 GYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATGI 307

Query: 218 ---ILGNREEYGFLLNT--SMVHVDDVARAHIFLLEYPDAKGRY------ICSSHT--LT 264
                   +  G         + V  VA A   L                + + H   + 
Sbjct: 308 APRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIG 367

Query: 265 IQEMAEFLSAKYPEYPIPTVE 285
           + E  ++L      YPI  ++
Sbjct: 368 LDEYVDWLIEAG--YPIRRID 386

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219

 Score = 74.3 bits (183), Expect = 4e-16
 Identities = 38/273 (13%), Positives = 86/273 (31%), Gaps = 61/273 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG +   L+  L    Y +    R     E         +         ++  
Sbjct: 2   KIFIVGSTGRVGKSLLKSLSTTDYQIYAGAR---KVEQ--------VPQYNN----VKAV 46

Query: 67  HADLS-HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
           H D+   P+     + G   +++V+       K   +V       G + ++++  K+  V
Sbjct: 47  HFDVDWTPEEMAKQLHGMDAIINVSG---SGGKSLLKVDLY----GAVKLMQAAEKAE-V 98

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           KR +  S+       +K +    +                K Y I+K   +       +E
Sbjct: 99  KRFILLST-IFSLQPEKWIGAGFDAL--------------KDYYIAKHFADLYLT---KE 140

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
             LD   + P  +       +  G +  +  +             ++   + DVA     
Sbjct: 141 TNLDYTIIQPGALTE----EEATGLIDINDEV-------------SASNTIGDVADTIKE 183

Query: 246 LLEYPDAKGRY--ICSSHTLTIQEMAEFLSAKY 276
           L+    + G+   + +  T   + +   L   +
Sbjct: 184 LVMTDHSIGKVISMHNGKTAIKEALESLLEHHH 216

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286

 Score = 74.7 bits (184), Expect = 7e-16
 Identities = 41/267 (15%), Positives = 77/267 (28%), Gaps = 56/267 (20%)

Query: 13  GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH 72
           G G +   L  RL   G+ VT   RS                        ++   AD++ 
Sbjct: 10  GCGDLGLELARRLTAQGHEVTGLRRSA-----------------QPMPAGVQTLIADVTR 52

Query: 73  PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS 132
           PD   + +     +L             +E      + G    L + L+   ++ V + S
Sbjct: 53  PDTLASIVHLRPEILVYCVAASEYS---DEHYRLSYVEGLRNTLSA-LEGAPLQHVFFVS 108

Query: 133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA-ALEFAEE--HGLD 189
           S   V Y  +  + +DE                               +  AE       
Sbjct: 109 S-TGV-YGQEVEEWLDED------------------TPPIAKDFSGKRMLEAEALLAAYS 148

Query: 190 LVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY 249
              L  S + GP    +     ++        R  +     T+ +H DD A    +L++ 
Sbjct: 149 STILRFSGIYGP---GRLRMIRQAQTPEQWPARNAW-----TNRIHRDDGAAFIAYLIQQ 200

Query: 250 PDAKGRY----ICSSHTLTIQEMAEFL 272
                      +  +  L + ++  +L
Sbjct: 201 RSHAVPERLYIVTDNQPLPVHDLLRWL 227

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} Length = 312

 Score = 75.0 bits (185), Expect = 8e-16
 Identities = 50/292 (17%), Positives = 104/292 (35%), Gaps = 47/292 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           ++ + G  G I + L  +L   +G             E+  + D+  L            
Sbjct: 4   KILIIGACGQIGTELTQKLRKLYGT------------ENVIASDIRKLN--TDVVNSGPF 49

Query: 66  FHADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
              +    +  +  +     T +  +A       E K P        +N    +L     
Sbjct: 50  EVVNALDFNQIEHLVEVHKITDIYLMAALLSATAE-KNPAFAW-DLNMNSLFHVLNLAKA 107

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
              +K++ + SS  AVF      +   +        I +  +    Y ISK   ER    
Sbjct: 108 KK-IKKIFWPSS-IAVFGPTTPKENTPQ------YTIMEPST---VYGISKQAGERWCEY 156

Query: 182 FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR----EEYGFLLNTS----M 233
           +   +G+D+ ++    ++     P   G   +  A+ +  +    ++Y   L++     M
Sbjct: 157 YHNIYGVDVRSIRYPGLISWSTPP---GGGTTDYAVDIFYKAIADKKYECFLSSETKMPM 213

Query: 234 VHVDDVARAHIFLLEYPDAKGR----YICSSHTLTIQEMAEFLSAKYPEYPI 281
           +++DD   A I +++ P  K +    Y  ++ + T  E+A  +    PE+ I
Sbjct: 214 MYMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTI 265

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A Length = 345

 Score = 75.1 bits (185), Expect = 9e-16
 Identities = 56/286 (19%), Positives = 98/286 (34%), Gaps = 45/286 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           RV + G  GFI + L  RLL    Y V       LD                        
Sbjct: 2   RVLILGVNGFIGNHLTERLLREDHYEVYG-----LDIGSDAISRFL-------NHPHFHF 49

Query: 66  FHADLSHP-DGFDAAIAGCTGVLH---VATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
              D+S   +  +  +  C  VL    +ATP+++  + P  V  +      L I++ C+K
Sbjct: 50  VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEYT-RNPLRVF-ELDFEENLRIIRYCVK 107

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK---SYAISKTLTERA 178
               KR+++ S++    Y        DE   + +     +    K    Y++SK L +R 
Sbjct: 108 YR--KRIIFPSTSEV--YGMCSDKYFDEDHSNLI-----VGPVNKPRWIYSVSKQLLDRV 158

Query: 179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL------ILGNRE--EYGFLLN 230
              + E+ GL      P   +GP +    A  + SS A+      ++             
Sbjct: 159 IWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 218

Query: 231 T-SMVHVDDVARAHIFLLEYPDAKGRYIC-----SSHTLTIQEMAE 270
                 + D   A   ++E    +            +  +I+E+ E
Sbjct: 219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGE 264

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351

 Score = 74.6 bits (184), Expect = 1e-15
 Identities = 57/289 (19%), Positives = 97/289 (33%), Gaps = 39/289 (13%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           +        +TG  GFI S L+ +LL     V           H+ + D           
Sbjct: 21  LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVI--GLDNFSTGHQYNLDEVKTLVSTEQW 78

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKS 118
            R      D+      +  + G   VLH A    V     +P        I G L IL +
Sbjct: 79  SRFCFIEGDIRDLTTCEQVMKGVDHVLHQAALGSVPRSIVDPITTN-ATNITGFLNILHA 137

Query: 119 CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
              +  V+   Y +S ++  Y D              + I    S    YA++K + E  
Sbjct: 138 AKNAQ-VQSFTYAAS-SST-YGD------HPALPKVEENIGNPLS---PYAVTKYVNEIY 185

Query: 179 ALEFAEEHGLDLVTL----------IPSMVVGPFICPKFAGSVRSSLALILGNREEYGFL 228
           A  +A  +G   + L           P+      I PK+  ++     + +      G  
Sbjct: 186 AQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVI-PKWTAAMLKGDDVYING---DG-- 239

Query: 229 LNTS--MVHVDDVARAHIF-LLEYPDAKGR-Y-ICSSHTLTIQEMAEFL 272
             TS    ++D+V + +I   L    AK   Y +      T+ E++ ++
Sbjct: 240 -ETSRDFCYIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYI 287

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236

 Score = 73.2 bits (180), Expect = 2e-15
 Identities = 48/249 (19%), Positives = 83/249 (33%), Gaps = 55/249 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV V G  G +A +L+  L + G+     VR   + E         L+   GAS+   I 
Sbjct: 23  RVLVVGANGKVARYLLSELKNKGHEPVAMVR---NEEQ-----GPELRER-GASD---IV 70

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
            A+L   + F  A A    V+  A        +   +I      G +  ++   K G +K
Sbjct: 71  VANL--EEDFSHAFASIDAVVFAAGSGPHTGADKTILIDLW---GAIKTIQEAEKRG-IK 124

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           R +  SS   V  +   ++M                   + Y ++K L +       +  
Sbjct: 125 RFIMVSSVGTVDPDQGPMNM-------------------RHYLVAKRLADDE----LKRS 161

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFL 246
            LD   + P  +       +  G V     +     E          +   DVA+    L
Sbjct: 162 SLDYTIVRPGPLSN----EESTGKVT----VSPHFSEITR------SITRHDVAKVIAEL 207

Query: 247 LEYPDAKGR 255
           ++     G+
Sbjct: 208 VDQQHTIGK 216

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224

 Score = 72.0 bits (176), Expect = 3e-15
 Identities = 33/251 (13%), Positives = 67/251 (26%), Gaps = 42/251 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ V G TG   S ++      G+ V   VR   DP+           +  GA     + 
Sbjct: 2   KIAVLGATGRAGSAIVAEARRRGHEVLAVVR---DPQK--------AADRLGA----TVA 46

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
                     +A +     V+   +      +    +     +        S L++    
Sbjct: 47  TLVKEPLVLTEADLDSVDAVVDALSVPWGSGRGYLHLDFATHLV-------SLLRNSDTL 99

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
            V    S +          ++D              +  + +                  
Sbjct: 100 AVFILGSASLAMPGADHPMILDFP----------ESAASQPWYDGALYQYYEYQFLQMNA 149

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFL 246
            ++ + + PS              V     L++G           S +   ++A A +  
Sbjct: 150 NVNWIGISPSEAFPS---GPATSYVAGKDTLLVGED-------GQSHITTGNMALAILDQ 199

Query: 247 LEYPDAKGRYI 257
           LE+P A    I
Sbjct: 200 LEHPTAIRDRI 210

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299

 Score = 72.4 bits (178), Expect = 6e-15
 Identities = 49/276 (17%), Positives = 88/276 (31%), Gaps = 61/276 (22%)

Query: 8   VCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           V V GGTG     +   LL+ G + V    R   +P  + +K+L     L GA     + 
Sbjct: 8   VVVFGGTGAQGGSVARTLLEDGTFKVRVVTR---NPRKKAAKELR----LQGAE----VV 56

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D       + A+ G      V    +   +E E    +   +          + G + 
Sbjct: 57  QGDQDDQVIMELALNGAYATFIVTNYWESCSQEQEVKQGKLLAD-------LARRLG-LH 108

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL--DSWGKSYAISKTLTERAALEFAE 184
            VVY+                       ++ I+KL       ++   K   E    E+  
Sbjct: 109 YVVYSG----------------------LENIKKLTAGRLAAAHFDGKGEVE----EYFR 142

Query: 185 EHGLDLVTLIP----SMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA 240
           + G+ + ++        ++  F+  K        L+L  G+            + V D+ 
Sbjct: 143 DIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVP-------MDGMSVSDLG 195

Query: 241 R-AHIFLLEYPDAKGRYIC-SSHTLTIQEMAEFLSA 274
                 L       G+ I  S+   T +E A  L+ 
Sbjct: 196 PVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTK 231

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330

 Score = 71.4 bits (176), Expect = 2e-14
 Identities = 54/286 (18%), Positives = 100/286 (34%), Gaps = 73/286 (25%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLR 64
           R+ +TGG G + S LI   L  G+ +       +D       + +    + LP     L 
Sbjct: 22  RILITGGAGCLGSNLIEHWLPQGHEILV-----ID-------NFATGKREVLP-PVAGLS 68

Query: 65  IFHADLSHPDGFDAAIAGC--TGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCL 120
           +    ++     + A      T V+H A       K+P++     A N  G++ + K+  
Sbjct: 69  VIEGSVTDAGLLERAFDSFKPTHVVHSAAAY----KDPDDWAEDAATNVQGSINVAKAAS 124

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETF----WSDVDYIRKLDSWGKSYAISKTLTE 176
           K+G VKR++   + A   Y       +        ++             SY ISKT  E
Sbjct: 125 KAG-VKRLLNFQT-ALC-YGRPATVPIPIDSPTAPFT-------------SYGISKTAGE 168

Query: 177 RAALEFAEEHGLDLVTLIPSMVVGPF-----ICPKFAGSVRSSLALILGNREEYG----- 226
                F     + +V+L  + V GP      I P F          +   ++ +      
Sbjct: 169 A----FLMMSDVPVVSLRLANVTGPRLAIGPI-PTF-------YKRLKAGQKCFCSDTVR 216

Query: 227 -FLLNTSMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAE 270
            F      + + D        L+     G + + +    +I+E+ +
Sbjct: 217 DF------LDMSDFLAIADLSLQEGRPTGVFNVSTGEGHSIKEVFD 256

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352

 Score = 71.4 bits (175), Expect = 2e-14
 Identities = 39/289 (13%), Positives = 79/289 (27%), Gaps = 70/289 (24%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M + K  + V G TG   + LI      G+ V   V      +   +++   L+ +P  +
Sbjct: 1   MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH---SLKGLIAEE---LQAIPNVT 54

Query: 61  ERLRIFHADLS-HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSC 119
               +F   L  +    D    G        T       E          +    +  + 
Sbjct: 55  ----LFQGPLLNNVPLMDTLFEGAHLAFINTTS--QAGDE-----IAIGKD----LADAA 99

Query: 120 LKSGTVKRVVYTS-SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA 178
            ++GT++  +Y+S  + +++     V M                         K   E  
Sbjct: 100 KRAGTIQHYIYSSMPDHSLYGPWPAVPMWA----------------------PKFTVE-- 135

Query: 179 ALEFAEEHGLDLVTLIPSM-------VVGPFICPKFAGSVRSSLALILGNREEYGFLLNT 231
              +  + GL    +   +       +  P    +                       + 
Sbjct: 136 --NYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDP--------DI 185

Query: 232 SMVHVD---DVAR-AHIFLLEYPDA-KGRYIC-SSHTLTIQEMAEFLSA 274
            +  +D   DV         + P    G  I  +  TL+  ++    S 
Sbjct: 186 PLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSR 234

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} Length = 372

 Score = 71.3 bits (175), Expect = 3e-14
 Identities = 59/287 (20%), Positives = 109/287 (37%), Gaps = 48/287 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF--LKNLPGASERLR 64
           +V + G  GFI   L  R+L+                     D+    L +L    ER+ 
Sbjct: 26  KVLILGVNGFIGHHLSKRILETTDWEVF-----GM-------DMQTDRLGDLVK-HERMH 72

Query: 65  IFHADLSHP-DGFDAAIAGCTGVLH---VATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
            F  D++   +  +  +  C  +L    +ATP  +  K+P  V  +      L I++S +
Sbjct: 73  FFEGDITINKEWVEYHVKKCDVILPLVAIATPATYV-KQPLRVF-ELDFEANLPIVRSAV 130

Query: 121 KSGTVKRVVYTSSNAAVF--YNDKDVDMMDETF-WSDVDYIRKLDSWGKSYAISKTLTER 177
           K G  K +V+ S+ + V+    D+  D       +  ++  R    W   YA SK L +R
Sbjct: 131 KYG--KHLVFPST-SEVYGMCADEQFDPDASALTYGPINKPR----W--IYACSKQLMDR 181

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL------ILGNRE--EYGFLL 229
               +    GL+     P   +GP +   +     SS  +      I+            
Sbjct: 182 VIWGYG-MEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGS 240

Query: 230 NT-SMVHVDDVARAHIFLLEYPD--AKGRYI---CSSHTLTIQEMAE 270
              +  +VDD   A + ++E  +  A G+       ++  +++E+A 
Sbjct: 241 QKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELAN 287

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364

 Score = 71.3 bits (174), Expect = 3e-14
 Identities = 45/299 (15%), Positives = 81/299 (27%), Gaps = 50/299 (16%)

Query: 10  VTGGTGFIASWLIMRLLDHGYS-----VTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + G TG I + L   L           V    R      H                  + 
Sbjct: 6   IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH--------------EDNPIN 51

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG- 123
               D+S PD   A ++  T V HV     + ++  E+   +        +L + + +  
Sbjct: 52  YVQCDISDPDDSQAKLSPLTDVTHVFYVT-WANRSTEQENCEANSKMFRNVLDAVIPNCP 110

Query: 124 TVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
            +K +   +         +        +  +++       D     Y       E   LE
Sbjct: 111 NLKHISLQTGRKHYMGPFESYGKIESHDPPYTE-------DLPRLKYMNFYYDLEDIMLE 163

Query: 182 -FAEEHGLDLVTLIPSMVVGP----------FICPKFAGSVRSSLALIL-GNREEYGFLL 229
              ++ GL      P  + G            +C   A        L   G +  +    
Sbjct: 164 EVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGY- 222

Query: 230 NTSMVHVDDVARAHIFLLEYPDAKGRY--ICSSHTLTIQEM----AEFLSAKYPEYPIP 282
            +     D +A  HI+    P AK     + +      +      AE    +  EY   
Sbjct: 223 -SDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEG 280

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} Length = 362

 Score = 70.4 bits (173), Expect = 5e-14
 Identities = 47/303 (15%), Positives = 93/303 (30%), Gaps = 57/303 (18%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELD-----PEHRNSKDLSFLKNLPGASE 61
            + +TGG GF+ S L     ++       V   LD         N++  S          
Sbjct: 12  TILITGGAGFVGSNLAFHFQENHPKAKVVV---LDKFRSNTLFSNNRPSSLGHFKNLIGF 68

Query: 62  RLRIFHADLSHP-DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           +  +  AD+++P D           + H A   D      E V+ +      L +L+   
Sbjct: 69  KGEVIAADINNPLDLRRLEKLHFDYLFHQAAVSDTTMLNQELVM-KTNYQAFLNLLEIAR 127

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
                 +V+Y SS A V Y +       +            +     Y  SK   +    
Sbjct: 128 SKK--AKVIYASS-AGV-YGN------TKAPNVVGKNESPEN----VYGFSKLCMDEFV- 172

Query: 181 EFAEEHGLDLVTL----------IPSMVVGPFICPKFAGSVRSSLALILGNREEYG---- 226
             +  +    V L                   +  + A    +   + L     +     
Sbjct: 173 -LSHSNDNVQVGLRYFNVYGPREFYKEKTASMV-LQLALGAMAFKEVKL-----FEFGEQ 225

Query: 227 ---FLLNTSMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKYPEYPIP 282
              F      V+++DV +A++  ++     G Y +  S   +  E+   L     ++ + 
Sbjct: 226 LRDF------VYIEDVIQANVKAMK-AQKSGVYNVGYSQARSYNEIVSILKEHLGDFKVT 278

Query: 283 TVE 285
            ++
Sbjct: 279 YIK 281

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369

 Score = 69.2 bits (169), Expect = 1e-13
 Identities = 40/284 (14%), Positives = 82/284 (28%), Gaps = 65/284 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            + +TG  GF+   L   L          V  +   E                       
Sbjct: 2   NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEE---------------------- 39

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
                     ++A+     ++H+A     E    +E      ++    +L    ++    
Sbjct: 40  ---------LESALLKADFIVHLAGVNRPEH--DKEFS-LGNVSYLDHVLDILTRNTKKP 87

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
            ++ +SS  A                         D+    Y  SK   E+   E+AEE+
Sbjct: 88  AILLSSSIQA-----------------------TQDN---PYGESKLQGEQLLREYAEEY 121

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE--EYGFLLNTSMVHVDDVARAHI 244
           G  +       + G +  P +   + +    I  N E       +  ++ +VDD+     
Sbjct: 122 GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIK 181

Query: 245 FLLEYPDAKGRYIC---SSHTLTIQEMAEFLSAKYPEYPIPTVE 285
             +E        +    +   +T+ E+ + L          T+ 
Sbjct: 182 RAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLP 225

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318

 Score = 68.8 bits (168), Expect = 1e-13
 Identities = 44/277 (15%), Positives = 79/277 (28%), Gaps = 54/277 (19%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           K ++ + GGTG+I + ++   L  G+      R        NS   + L      S    
Sbjct: 11  KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRP-------NSSKTTLLDEFQ--SLGAI 61

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I   +L   +     +     V+                     I     IL++   +G 
Sbjct: 62  IVKGELDEHEKLVELMKKVDVVISALAF--------------PQILDQFKILEAIKVAGN 107

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           +KR + +                   F  + D I  L  +           +R      E
Sbjct: 108 IKRFLPSD------------------FGVEEDRINALPPFEALIER-----KRMIRRAIE 144

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
           E  +    +  +     FI              + G  E        +M +  D+    I
Sbjct: 145 EANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAK-----FAMNYEQDIGLYTI 199

Query: 245 FLLEYPDAKGR---YICSSHTLTIQEMAEFLSAKYPE 278
            +   P A  R   Y  S++ +T  E+      K  +
Sbjct: 200 KVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK 236

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 39/269 (14%), Positives = 70/269 (26%), Gaps = 58/269 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
            V + G +G     L+  +L+ G    VT   R +L  +               A + + 
Sbjct: 20  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------EAYKNVN 66

Query: 65  IFHADLSHPDGFDAAIAGCTGVLH-VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
               D    D + +A  G       + T       E    + +   +  L   +     G
Sbjct: 67  QEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDR---DYVLKSAELAKAGG 123

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAALEF 182
             K     SS  A                         D      Y   K   E    E 
Sbjct: 124 -CKHFNLLSSKGA-------------------------DKSSNFLYLQVKGEVEAKVEEL 157

Query: 183 AEEHGLDLVTLI-PSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVAR 241
                 D  ++  P +++      +    +       L          +   V V  V R
Sbjct: 158 ----KFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSL-----PDSWASGHSVPVVTVVR 208

Query: 242 AHIFLLEYPDAKGRYICSSHTLTIQEMAE 270
           A +  +  P  K   +  +    I ++ +
Sbjct: 209 AMLNNVVRPRDKQMELLENK--AIHDLGK 235

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* Length = 404

 Score = 67.9 bits (166), Expect = 3e-13
 Identities = 40/322 (12%), Positives = 91/322 (28%), Gaps = 53/322 (16%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPEHRNSKDLSFLKNLPGASE 61
           RV V GG G+      + L    Y V           +      +   ++ + +     +
Sbjct: 13  RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWK 72

Query: 62  -----RLRIFHADLSHPDGFDAAIAG--CTGVLHVA--TPVDFEDKEPEE-VITQRA-IN 110
                 + ++  D+   +    +        V+H        +   +    V TQ   + 
Sbjct: 73  ALTGKSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVI 132

Query: 111 GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK------DVDMMDETFWSDVDYIRKLDSW 164
           GTL +L +  + G    +V        +           + +        + Y ++  S+
Sbjct: 133 GTLNVLFAIKEFGEECHLVK-LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSF 191

Query: 165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE 224
              Y +SK           +  G+    L   +V G              L   L     
Sbjct: 192 ---YHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEM---HEELRNRLDYDAV 245

Query: 225 YG-----FLLNTSM----------------VHVDDVARAHIFLLEYPDAKGR-YICSSHT 262
           +G     F +  ++                + + D  +     +  P   G   + +  T
Sbjct: 246 FGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT 305

Query: 263 --LTIQEMAEFLSAKYPEYPIP 282
              ++ E+A  ++    +  + 
Sbjct: 306 EQFSVNELASLVTKAGSKLGLD 327

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307

 Score = 65.3 bits (159), Expect = 2e-12
 Identities = 42/282 (14%), Positives = 86/282 (30%), Gaps = 55/282 (19%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD--LSFLKNLPGASER 62
           + ++ + G TG I   ++   +  G      VR  +   +  +K+  +   ++L G    
Sbjct: 2   ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSL-GV--- 57

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             +   D++  +    AI     V+  A  +  ED+                I+K+  ++
Sbjct: 58  -ILLEGDINDHETLVKAIKQVDIVICAAGRLLIEDQVK--------------IIKAIKEA 102

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G VK+   +                   F  DVD    ++   + +       + +    
Sbjct: 103 GNVKKFFPSE------------------FGLDVDRHDAVEPVRQVFEE-----KASIRRV 139

Query: 183 AEEHGLDLVTLIPSM---VVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
            E  G+    L            +    A        +ILG+          + V   DV
Sbjct: 140 IEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVK-----GAYVTEADV 194

Query: 240 ARAHIFLLEYPDAKGRYIC---SSHTLTIQEMAEFLSAKYPE 278
               I     P+   + +      + LT  E+      K  +
Sbjct: 195 GTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK 236

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236

 Score = 62.9 bits (153), Expect = 6e-12
 Identities = 36/247 (14%), Positives = 64/247 (25%), Gaps = 59/247 (23%)

Query: 7   RVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            V + G  G IA  +I +L D      T   R    P   +                 +I
Sbjct: 25  NVLILGAGGQIARHVINQLADKQTIKQTLFAR---QPAKIHKP----------YPTNSQI 71

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
              D+ +      A+ G   V    T  D +                  ++ +      V
Sbjct: 72  IMGDVLNHAALKQAMQGQDIVYANLTGEDLDI-------------QANSVIAAMKACD-V 117

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           KR+++  S                       ++   ++             R A +  E 
Sbjct: 118 KRLIFVLSLGI-------------YDEVPGKFVEWNNAVIGEPLKPF----RRAADAIEA 160

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
            GL+   L P+                    L   N    G     ++V    VA     
Sbjct: 161 SGLEYTILRPAW---------LTDEDIIDYELTSRNEPFKG-----TIVSRKSVAALITD 206

Query: 246 LLEYPDA 252
           +++ P+ 
Sbjct: 207 IIDKPEK 213

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221

 Score = 61.6 bits (149), Expect = 1e-11
 Identities = 39/247 (15%), Positives = 70/247 (28%), Gaps = 56/247 (22%)

Query: 7   RVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
            + + G  G IA  L   LL +    +T   R     + R   ++          ER+ +
Sbjct: 7   YITILGAAGQIAQXLTATLLTYTDMHITLYGR---QLKTRIPPEII-------DHERVTV 56

Query: 66  FHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
                 +P   + A+     V   A                   +    I+K+  +   +
Sbjct: 57  IEGSFQNPGXLEQAVTNAEVVFVGAMESG---------------SDMASIVKALSRXN-I 100

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
           +RV+  S        +  V +   TF          D+   SY   +    R A     E
Sbjct: 101 RRVIGVSMAGL--SGEFPVALEKWTF----------DNLPISYVQGE----RQARNVLRE 144

Query: 186 HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIF 245
             L+   L  + +        +                  G   N + V  + V +A   
Sbjct: 145 SNLNYTILRLTWLYNDPEXTDYE-------------LIPEGAQFNDAQVSREAVVKAIFD 191

Query: 246 LLEYPDA 252
           +L   D 
Sbjct: 192 ILHAADE 198

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215

 Score = 61.2 bits (149), Expect = 2e-11
 Identities = 49/277 (17%), Positives = 79/277 (28%), Gaps = 71/277 (25%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPG 58
           M     RV + G TG     L+ R+L       V    R  L    R    +  L  L  
Sbjct: 1   MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAEL-- 58

Query: 59  ASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAI--NGTLGIL 116
                             D A   C G            +E       RA+  +  L + 
Sbjct: 59  ----------LPQLDGSIDTAFC-CLGTTIKEAG----SEE-----AFRAVDFDLPLAVG 98

Query: 117 KSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLT 175
           K  L+ G  +  +  S+  A                         D+     Y   K   
Sbjct: 99  KRALEMG-ARHYLVVSALGA-------------------------DAKSSIFYNRVKGEL 132

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM-- 233
           E+A  E        L    PS++ GP    + A  + + +A           +L      
Sbjct: 133 EQALQEQGWPQ---LTIARPSLLFGPREEFRLAEILAAPIA----------RILPGKYHG 179

Query: 234 VHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAE 270
           +   D+ARA   L        R++ S     ++++ +
Sbjct: 180 IEACDLARALWRLALEEGKGVRFVESD---ELRKLGK 213

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313

 Score = 61.9 bits (150), Expect = 3e-11
 Identities = 49/285 (17%), Positives = 92/285 (32%), Gaps = 50/285 (17%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           M++ K RV + GGTG+I   ++   +  G+      R E+       + L + K L GA 
Sbjct: 1   MDK-KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-GA- 57

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
              ++  A L        A+     V+               ++ Q        ++++  
Sbjct: 58  ---KLIEASLDDHQRLVDALKQVDVVISALAG----GVLSHHILEQLK------LVEAIK 104

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
           ++G +KR + +                   F  D D +      G    I K    RA  
Sbjct: 105 EAGNIKRFLPSE------------------FGMDPDIMEHALQPGSITFIDKRKVRRA-- 144

Query: 181 EFAEEHGLDLVTLIPSMVVGPFIC--PKFAGSVRSSL--ALILGNREEYGFLLNTSMVHV 236
              E   +    +  +M  G F     +  G +       LI G+            V  
Sbjct: 145 --IEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVK-----GIWVDE 197

Query: 237 DDVARAHIFLLEYPDAKGRYI---CSSHTLTIQEMAEFLSAKYPE 278
           DDV    I  ++ P    + +      + L+ +E+ +       +
Sbjct: 198 DDVGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 242

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308

 Score = 59.9 bits (145), Expect = 1e-10
 Identities = 51/277 (18%), Positives = 89/277 (32%), Gaps = 52/277 (18%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + R+ + G TG+I   +    LD G+     VR      +     L       GA     
Sbjct: 4   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA----N 59

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I H  +        A+     V+     +  E +              + I+K+  + GT
Sbjct: 60  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQ--------------VNIIKAIKEVGT 105

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           VKR   +                   F +DVD +  ++   KS    K    RA     E
Sbjct: 106 VKRFFPSE------------------FGNDVDNVHAVE-PAKSVFEVKAKVRRAI----E 142

Query: 185 EHGLDLVTLIPSMVVGPF---ICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVAR 241
             G+    +  +   G F   +      +      +ILG+            V  +D+  
Sbjct: 143 AEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR-----VVFVKEEDIGT 197

Query: 242 AHIFLLEYPDA--KGRYIC-SSHTLTIQEMAEFLSAK 275
             I  ++ P    K  Y+   ++TL++ E+      K
Sbjct: 198 FTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKK 234

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 Length = 660

 Score = 60.4 bits (147), Expect = 1e-10
 Identities = 62/303 (20%), Positives = 106/303 (34%), Gaps = 59/303 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRI 65
           RV + G  GFI + L  RLL    Y V       LD                        
Sbjct: 317 RVLILGVNGFIGNHLTERLLREDHYEVYG-----LDIGSDAISRFL-------NHPHFHF 364

Query: 66  FHADLS-HPDGFDAAIAGCTGVLH---VATPVDFEDKEPEEVITQRAINGTLGILKSCLK 121
              D+S H +  +  +  C  VL    +ATP+++  + P  V         L I++ C+K
Sbjct: 365 VEGDISIHSEWIEYHVKKCDVVLPLVAIATPIEY-TRNPLRVFELDFE-ENLRIIRYCVK 422

Query: 122 SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALE 181
               KR+++ S++    Y        DE   + +        W   Y++SK L +R    
Sbjct: 423 YR--KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRW--IYSVSKQLLDRVIWA 476

Query: 182 FAEEHGLDLVTLIPSMVVGPF-------------ICPKFAGSV--RSSLALILGNREEYG 226
           + E+ GL      P   +GP                 +   ++   S + LI G +++  
Sbjct: 477 YGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC 536

Query: 227 FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH---------TLTIQEMAEFLSAKYP 277
           F        + D   A   ++E    +    C              +I+E+ E L A + 
Sbjct: 537 F------TDIRDGIEALYRIIENAGNR----CDGEIINIGNPENEASIEELGEMLLASFE 586

Query: 278 EYP 280
           ++P
Sbjct: 587 KHP 589

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* Length = 343

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 44/222 (19%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVT-----TTVRSELDPEHRNSKDLSFLKN 55
           ME+ + R+ +TGG GF+ S L  +L+  G+ VT      T R               +++
Sbjct: 23  MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN------------VEH 70

Query: 56  LPGASERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRA-INGTLG 114
             G  E   + + D+  P   +        + H+A+P    +     + T +    GTL 
Sbjct: 71  WIG-HENFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLN 124

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTL 174
           +L    + G   R++  S++    Y D +V    E +W  V+ I         Y   K +
Sbjct: 125 MLGLAKRVG--ARLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGP--RA--CYDEGKRV 176

Query: 175 TERAALEFAEEHGLDLV------TLIPSM------VVGPFIC 204
            E     + ++ G+++       T  P M      VV  FI 
Sbjct: 177 AETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFIL 218

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286

 Score = 56.4 bits (136), Expect = 1e-09
 Identities = 51/273 (18%), Positives = 84/273 (30%), Gaps = 52/273 (19%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
            G +   G  G+ A  L   L   G+ +  T R+                  P   E +R
Sbjct: 5   TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRN------------------PDQMEAIR 45

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
              A+     G + ++ G T +L    P    D     +  Q A            ++  
Sbjct: 46  ASGAEPLLWPGEEPSLDGVTHLLISTAPDSGGDPVLAALGDQIA-----------ARAAQ 94

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
            + V Y S+  AV Y D D   +DET        R            +        ++  
Sbjct: 95  FRWVGYLST-TAV-YGDHDGAWVDETTPLTPTAAR-----------GRWRVMAEQ-QWQA 140

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
              L L     + + GP       G    S     G R         S +HV+D+A+   
Sbjct: 141 VPNLPLHVFRLAGIYGP-------GRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLA 193

Query: 245 FLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKY 276
             +  PD    Y +C    +  Q++  + +   
Sbjct: 194 ASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQ 226

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.2 bits (137), Expect = 2e-09
 Identities = 50/374 (13%), Positives = 91/374 (24%), Gaps = 126/374 (33%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTT---------TVRSELDPE----------HRNSK 48
           V + G  G   +W+ + +    Y V            +++   PE          ++   
Sbjct: 153 VLIDGVLGSGKTWVALDVCLS-YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 49  DL----SFLKNLP----GASERLRIFHADLSHP---------------DGFDAAIAGC-- 83
           +         N+          LR       +                + F+     C  
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFN---LSCKI 268

Query: 84  ---------TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL--KSGTVKRVVYTS 132
                    T  L  AT            +T         +L   L  +   + R V T+
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDE---VKSLLLKYLDCRPQDLPREVLTT 325

Query: 133 SN------AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           +       A    +           W   D  + ++    +  I  +L     LE AE  
Sbjct: 326 NPRRLSIIAESIRDGLAT-------W---DNWKHVNCDKLTTIIESSL---NVLEPAEYR 372

Query: 187 GL--DLV-----TLIPSMVVG------PFICPKF--AGSVRSSLALILGNREEYGF--LL 229
            +   L        IP++++                    + SL              + 
Sbjct: 373 KMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY 432

Query: 230 NTSMVHVDDVARAHIFLLE-Y------------PDAKGRYICS--SHTLTIQEMAE---- 270
               V +++    H  +++ Y            P    +Y  S   H L   E  E    
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 271 ---------FLSAK 275
                    FL  K
Sbjct: 493 FRMVFLDFRFLEQK 506

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 7e-04
 Identities = 35/199 (17%), Positives = 57/199 (28%), Gaps = 57/199 (28%)

Query: 99  EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVD--MMDETFWSDVD 156
            P + +    I+G LG  K+ +              A        V   M  + FW ++ 
Sbjct: 148 RPAKNVL---IDGVLGSGKTWV--------------ALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 157 YIRKLDS-----WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSV 211
                ++         Y I    T R+      +  +  +      +        +    
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL---LKSKPY---- 243

Query: 212 RSSLALILGN---REEY-GF------LLNTSMVHVDDV----ARAHIFLLEYPDAKGRYI 257
            + L L+L N    + +  F      LL T    V D        HI L  +        
Sbjct: 244 ENCL-LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM------ 296

Query: 258 CSSHTLTIQEMAEFLSAKY 276
               TLT  E+   L  KY
Sbjct: 297 ----TLTPDEVKSLL-LKY 310

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321

 Score = 55.3 bits (133), Expect = 5e-09
 Identities = 36/280 (12%), Positives = 81/280 (28%), Gaps = 52/280 (18%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
             ++ + GGTG+I  +++   L   +      R    P   +S   S        S  + 
Sbjct: 4   MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYAR----PLTPDSTPSSVQLREEFRSMGVT 59

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I   ++   +   + +     V+          +              + I+ +   +G 
Sbjct: 60  IIEGEMEEHEKMVSVLKQVDIVISALPFPMISSQ--------------IHIINAIKAAGN 105

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           +KR + +                   F  + D I+ L  +           +R      E
Sbjct: 106 IKRFLPSD------------------FGCEEDRIKPLPPFESVLEK-----KRIIRRAIE 142

Query: 185 EHGLDLVTLIPSMVVG---PFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVAR 241
              L    +  +        ++        R+   +I G  E         + + +D+A+
Sbjct: 143 AAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETK-----FVLNYEEDIAK 197

Query: 242 AHIFLLEYPDAKGRYIC---SSHTLTIQEMAEFLSAKYPE 278
             I +   P    R +      + ++  E+     AK   
Sbjct: 198 YTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL 237

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346

 Score = 55.0 bits (132), Expect = 6e-09
 Identities = 43/284 (15%), Positives = 86/284 (30%), Gaps = 52/284 (18%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           +   KGRV + G TGFI  ++    LD         R    P  R+       K L    
Sbjct: 6   VPSPKGRVLIAGATGFIGQFVATASLDAHRPTYILAR----PGPRSPSKAKIFKAL--ED 59

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           +   I +  ++  +  +  +      + V+T            +   +I   + ++K+  
Sbjct: 60  KGAIIVYGLINEQEAMEKILKEHEIDIVVST------------VGGESILDQIALVKAMK 107

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
             GT+KR + +                   F  DV+    ++     Y       +R   
Sbjct: 108 AVGTIKRFLPSE------------------FGHDVNRADPVEPGLNMYRE-----KRRVR 144

Query: 181 EFAEEHGLDLVTLIPSMVVG---PFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVD 237
           +  EE G+    +  + +                 +    I G+            V   
Sbjct: 145 QLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVK-----AYFVAGT 199

Query: 238 DVARAHIFLLEYPDAKGRYI---CSSHTLTIQEMAEFLSAKYPE 278
           D+ +  +  ++      + +    S + L I E+A     K   
Sbjct: 200 DIGKFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR 243

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* Length = 357

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 37/156 (23%), Positives = 56/156 (35%), Gaps = 24/156 (15%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLD-----HGYSVTTTVRSELDPEHRNSKDLSFLKNLPG 58
           GK RV VTG TGF   WL + L        GYS        L      S     L     
Sbjct: 9   GK-RVFVTGHTGFKGGWLSLWLQTMGATVKGYS--------LTAPTVPS-----LFETAR 54

Query: 59  ASERLRIFHADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLG 114
            ++ ++    D+   +    +I       V H+A    V     EP E  +   + GT+ 
Sbjct: 55  VADGMQSEIGDIRDQNKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYS-TNVMGTVY 113

Query: 115 ILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET 150
           +L++    G VK VV  +S+      +      +  
Sbjct: 114 LLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENE 149

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 44/273 (16%), Positives = 92/273 (33%), Gaps = 54/273 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V +TG  G +   L  +L   G+ V   VR E                 P   +R    
Sbjct: 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRKE-----------------PKPGKRF--- 188

Query: 67  HADLSHPDGFDAAIAGCTGVLHVA-TPVD--FEDKEPEEVITQRAINGTLGILKSCLKSG 123
                  +     + G   ++H+A  P+   F D   E +   R +  T  + +   +S 
Sbjct: 189 ---WDPLNPASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESR-VLPTKFLAELVAEST 244

Query: 124 TVKRVVYTSSNAAVFY-NDKDVDMMDETFWSDVDYIRKL-DSWGKSYAISKTLTERAALE 181
               ++  S++A  FY +D+  +++ E   S  D++ ++   W           E A   
Sbjct: 245 QCTTMI--SASAVGFYGHDRGDEILTEESESGDDFLAEVCRDW-----------EHATAP 291

Query: 182 FAEEHGLDLVTLIPSMVVGPF--ICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDV 239
            A + G  +  +   + +     + P       + L    G+   +      S + +DD+
Sbjct: 292 -ASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSW-----FSWIAIDDL 345

Query: 240 ARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEF 271
              +   +      G     + + ++    A+ 
Sbjct: 346 TDIYYRAIVDAQISGPINAVAPNPVS---NADM 375

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289

 Score = 48.4 bits (116), Expect = 7e-07
 Identities = 43/268 (16%), Positives = 91/268 (33%), Gaps = 62/268 (23%)

Query: 10  VTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA 68
           +TG TG + + +  + + +        VR   + E          K       ++ +   
Sbjct: 5   LTGATGHLGTHITNQAIANHIDHFHIGVR---NVE----------KVPDDWRGKVSVRQL 51

Query: 69  DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRV 128
           D  + +    A  G   V+ + +          + I +        ++ +  +SG V  +
Sbjct: 52  DYFNQESMVEAFKGMDTVVFIPSI----IHPSFKRIPE-----VENLVYAAKQSG-VAHI 101

Query: 129 VYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGL 188
           ++    A       +   M   F      +      G  Y     +  R A+ + +    
Sbjct: 102 IFIGYYAD---QHNNPFHMSPYFGYASRLLSTS---GIDYTY---V--RMAM-YMD---- 145

Query: 189 DLVTLIPSMVV-GPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLL 247
            L   +P ++     I P  AG  R                   + +  +D+AR  I ++
Sbjct: 146 PLKPYLPELMNMHKLIYP--AGDGR------------------INYITRNDIARGVIAII 185

Query: 248 EYPDAKGR-YICSSHTLTIQEMAEFLSA 274
           + PD  G+ Y+ S ++  ++E+A  LS 
Sbjct: 186 KNPDTWGKRYLLSGYSYDMKELAAILSE 213

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286

 Score = 47.7 bits (114), Expect = 1e-06
 Identities = 42/271 (15%), Positives = 85/271 (31%), Gaps = 69/271 (25%)

Query: 10  VTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           +TG TG +  ++I  L+       +   VR   +P           K    A++ + +  
Sbjct: 4   ITGATGQLGHYVIESLMKTVPASQIVAIVR---NPA----------KAQALAAQGITVRQ 50

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
           AD        +A+ G   +L +++       E  +   Q        ++ +   +G VK 
Sbjct: 51  ADYGDEAALTSALQGVEKLLLISSS------EVGQRAPQ-----HRNVINAAKAAG-VKF 98

Query: 128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG 187
           + YTS   A                         D+     A     TE+       + G
Sbjct: 99  IAYTSLLHA-------------------------DTSPLGLADEHIETEKM----LADSG 129

Query: 188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN--TSMVHVDDVARAHIF 245
           +    L             ++ +  +S    L +    G   +   +     D A A   
Sbjct: 130 IVYTLLRNGW---------YSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAAR 180

Query: 246 LLEYPDAKGR-YICS-SHTLTIQEMAEFLSA 274
           ++     +G+ Y  +     T+ ++A  L+ 
Sbjct: 181 VISEAGHEGKVYELAGDSAWTLTQLAAELTK 211

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287

 Score = 45.7 bits (109), Expect = 6e-06
 Identities = 28/129 (21%), Positives = 46/129 (35%), Gaps = 25/129 (19%)

Query: 10  VTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           VTG TG +   +I  LL       +   VR   + E            L      +R  H
Sbjct: 5   VTGATGQLGGLVIQHLLKKVPASQIIAIVR---NVEK--------ASTLADQGVEVR--H 51

Query: 68  ADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR 127
            D + P+    A AG + +L ++ P          ++          ++K+   +G VK 
Sbjct: 52  GDYNQPESLQKAFAGVSKLLFISGP---HYDNTLLIVQHAN------VVKAARDAG-VKH 101

Query: 128 VVYTSSNAA 136
           + YT    A
Sbjct: 102 IAYTGYAFA 110

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} Length = 330

 Score = 42.0 bits (100), Expect = 1e-04
 Identities = 51/288 (17%), Positives = 94/288 (32%), Gaps = 91/288 (31%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS--FLKNLPGASERLRIFH 67
           + GG G+I S  + +L+D G SV       +D       +L       +    E  + ++
Sbjct: 6   ICGGAGYIGSHAVKKLVDEGLSVVV-----VD-------NLQTGHEDAIT---EGAKFYN 50

Query: 68  ADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRA-----INGTLGILKS 118
            DL                 V+H A  + V         +          + G L +L+ 
Sbjct: 51  GDLRDKAFLRDVFTQENIEAVMHFAADSLV------GVSMEKPLQYYNNNVYGALCLLEV 104

Query: 119 CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS----YAISKTL 174
             +   V + ++ SS AA  Y + DVD++ E                 +    Y  +K  
Sbjct: 105 MDEFK-VDKFIF-SSTAAT-YGEVDVDLITEET-------------MTNPTNTYGETKLA 148

Query: 175 TERAALEFAEEHGLDLVTL--------IPSMVVG----------PFICPKFAGSVRSSLA 216
            E+    +++   L              P+ ++G          P +  + A   R  + 
Sbjct: 149 IEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVL-QVALGQREKIM 207

Query: 217 LILGN----------REEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG 254
            + G+          R +Y        +HV+D+  AH   L+     G
Sbjct: 208 -MFGDDYNTPDGTCIR-DY--------IHVEDLVAAHFLGLKDLQNGG 245

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 34/148 (22%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT---VRSELDPEHRNSKDLSFLKNLP 57
            E     V VTGG G+I S  ++ L+++GY          S  D   R       L+ L 
Sbjct: 7   SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-------LEVLT 59

Query: 58  GASERLRIFHADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVIT 105
                +  +  DL    G +          V+H             P+ +          
Sbjct: 60  K--HHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNN------ 111

Query: 106 QRAINGTLGILKSCLKSGTVKRVVYTSS 133
              I GT+ +L+   +   V + V++SS
Sbjct: 112 ---ILGTVVLLELMQQYN-VSKFVFSSS 135

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} Length = 341

 Score = 39.7 bits (94), Expect = 7e-04
 Identities = 42/163 (25%), Positives = 65/163 (39%), Gaps = 34/163 (20%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF--LKNLPGAS 60
             KG + VTGG G+I S   + LL HGY V        D    NSK  +   ++ + G  
Sbjct: 3   STKGTILVTGGAGYIGSHTAVELLAHGYDVVI-----AD-NLVNSKREAIARIEKITG-- 54

Query: 61  ERLRIFHADLSHPDGFDAAIA--GCTGVLH----------VATPVDFEDKEPEEVITQRA 108
           +       D+S              T  +H          VA P+++             
Sbjct: 55  KTPAFHETDVSDERALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNN--------- 105

Query: 109 INGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF 151
           ++  L +L+   +   VKR+V++SS A V Y   +   +DETF
Sbjct: 106 LDSLLSLLRVMRERA-VKRIVFSSS-ATV-YGVPERSPIDETF 145

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	285
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	100.0
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	100.0
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	100.0
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	100.0
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	100.0
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	100.0
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	100.0
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	100.0
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	100.0
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	100.0
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	100.0
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	100.0
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	100.0
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	100.0
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	100.0
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	100.0
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	100.0
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	100.0
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	100.0
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	100.0
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	100.0
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	100.0
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	100.0
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	100.0
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	100.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	100.0
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	100.0
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	100.0
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	100.0
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	100.0
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	100.0
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	100.0
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	100.0
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	100.0
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	100.0
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	100.0
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	100.0
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	100.0
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	100.0
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	100.0
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	100.0
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	100.0
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	100.0
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	100.0
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	100.0
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	100.0
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	100.0
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	100.0
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	100.0
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	100.0
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	100.0
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	100.0
4f6c_A	427	AUSA reductase domain protein; thioester reductase	100.0
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	100.0
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	100.0
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	100.0
4f6l_B	508	AUSA reductase domain protein; thioester reductase	100.0
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	100.0
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	100.0
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	100.0
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	100.0
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	100.0
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	100.0
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	100.0
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	100.0
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	100.0
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	100.0
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	100.0
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	100.0
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	100.0
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	100.0
1xq6_A	253	Unknown protein; structural genomics, protein stru	100.0
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	100.0
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.98
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.98
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.97
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.97
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.97
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.97
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.97
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.97
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.97
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.97
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
1spx_A	278	Short-chain reductase family member (5L265); paral	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.96
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.96
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.96
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.96
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	99.96
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	99.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.96
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.96
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.96
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.96
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.96
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.96
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.96
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.95
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.95
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.95
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.95
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.95
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.95
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.95
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.95
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.95
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.95
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.95
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.95
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	99.95
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	99.95
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.95
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.95
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	99.95
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	99.95
4dqx_A	277	Probable oxidoreductase protein; structural genomi	99.95
3imf_A	257	Short chain dehydrogenase; structural genomics, in	99.95
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.95
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.95
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.95
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	99.95
3rih_A	293	Short chain dehydrogenase or reductase; structural	99.95
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.95
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.95
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.95
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.95
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.95
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.95
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.95
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.95
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.95
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.95
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.95
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.95
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.95
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	99.95
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.95
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.95
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.95
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.95
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.95
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	99.95
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	99.95
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	99.95
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.95
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	99.95
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.95
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.95
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.95
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.95
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.95
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.95
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.94
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.94
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.94
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.94
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.94
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.94
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.94
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.94
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.94
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.94
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.94
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.94
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	99.94
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.94
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	99.94
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	99.94
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.94
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.94
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.94
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.94
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	99.94
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.94
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.94
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	99.94
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.94
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	99.94
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.94
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.94
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.94
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.94
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	99.94
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.94
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	99.94
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.94
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.94
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.94
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.94
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	99.94
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.94
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.94
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.94
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.94
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.94
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.94
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.94
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.94
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.94
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.94
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.94
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.94
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.94
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.94
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.94
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.94
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.94
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.94
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.94
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.94
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.94
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.94
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.94
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.94
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.94
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.94
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.94
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.94
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.94
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.94
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	99.94
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.94
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.94
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.93
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	99.93
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.93
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.93
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.93
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.93
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.93
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.93
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.93
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.93
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.93
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.93
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.93
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	99.93
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	99.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.93
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.93
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.93
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.93
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.93
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.93
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.93
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.93
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.93
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	99.93
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.93
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.92
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.92
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.92
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.92
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.92
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.92
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.92
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.92
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	99.92
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	99.92
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.92
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	99.92
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.91
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.91
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.91
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	99.91
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	99.91
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.91
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.9
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.9
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.9
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.9
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.89
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.89
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.89
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.88
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.88
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.86
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.86
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.84
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.83
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.82
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.82
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.81
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.75
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.74
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.73
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.72
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.71
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.71
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.7
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.69
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.67
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.47
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	99.46
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.45
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	99.42
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	99.31
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	99.1
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	99.09
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.99
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.98
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	98.95
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.92
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.88
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	98.86
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	98.81
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	98.76
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.76
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.75
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.75
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.68
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	98.59
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	98.58
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.57
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.56
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	98.56
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	98.48
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.47
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	98.37
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	98.35
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	98.3
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	98.3
3tl2_A	315	Malate dehydrogenase; center for structural genomi	98.27
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.26
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	98.25
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	98.21
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	98.13
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	98.12
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	98.1
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	98.05
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.03
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	98.03
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	98.0
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	97.99
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	97.99
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.98
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	97.98
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.98
4g65_A	461	TRK system potassium uptake protein TRKA; structur	97.97
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.93
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.93
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.92
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.9
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	97.89
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.88
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	97.87
2nqt_A	352	N-acetyl-gamma-glutamyl-phosphate reductase; apopr	97.87
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	97.87
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	97.86
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	97.85
2hjs_A	340	USG-1 protein homolog; aspartate-semialdehyde dehy	97.84
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.83
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.82
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	97.82
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	97.82
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	97.81
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	97.8
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.78
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	97.77
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	97.76
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	97.76
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	97.75
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	97.74
2ozp_A	345	N-acetyl-gamma-glutamyl-phosphate reductase; amino	97.74
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	97.71
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	97.67
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.65
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	97.64
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	97.64
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.64
1lnq_A	336	MTHK channels, potassium channel related protein;	97.62
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.59
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	97.57
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.57
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.57
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.56
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.56
3pwk_A	366	Aspartate-semialdehyde dehydrogenase; NADP binding	97.55
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.52
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.51
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.51
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.5
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.48
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.47
1ys4_A	354	Aspartate-semialdehyde dehydrogenase; oxidoreducta	97.47
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	97.46
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	97.46
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.45
1hyh_A	309	L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2	97.44
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.44
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.43
2i6t_A	303	Ubiquitin-conjugating enzyme E2-like isoform A; L-	97.42
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.42
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.41
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.4
2r00_A	336	Aspartate-semialdehyde dehydrogenase; conformation	97.37
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	97.37
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	97.35
1xyg_A	359	Putative N-acetyl-gamma-glutamyl-phosphate reduct;	97.34
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.33
2ep5_A	350	350AA long hypothetical aspartate-semialdehyde deh	97.32
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	97.32
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.31
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.28
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.28
2ph5_A	480	Homospermidine synthase; alpha-beta protein, struc	97.27
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	97.26
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	97.26
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.26
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.26
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.25
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.24
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.23
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	97.23
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	97.23
3dr3_A	337	N-acetyl-gamma-glutamyl-phosphate reductase; csgid	97.22
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	97.22
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	97.21
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.21
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	97.19
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.19
3qha_A	296	Putative oxidoreductase; seattle structural genomi	97.19
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	97.15
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.14
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.13
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.13
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.11
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.09
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.09
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	97.07
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	97.07
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	97.07
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	97.07
1y81_A	138	Conserved hypothetical protein; hyperthermophIle,	97.07
3ax6_A	380	Phosphoribosylaminoimidazole carboxylase, ATPase;	97.06
3tz6_A	344	Aspartate-semialdehyde dehydrogenase; asadh, ASD,	97.06
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	97.06
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	97.05
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	97.05
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.04
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	97.04
2d59_A	144	Hypothetical protein PH1109; COA binding, structur	97.03
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	97.03
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	97.03
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	97.03
4dpl_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.02
4dpk_A	359	Malonyl-COA/succinyl-COA reductase; dinucleotide b	97.02
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	97.02
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	97.01
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	97.01
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	96.97
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	96.97
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.96
4ffl_A	363	PYLC; amino acid, biosynthesis of pyrrolysine, iso	96.96
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.94
3l07_A	285	Bifunctional protein fold; structural genomics, ID	96.94
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.93
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	96.93
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.92
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.92
1u8x_X	472	Maltose-6'-phosphate glucosidase; structural genom	96.91
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	96.91
3k5i_A	403	Phosphoribosyl-aminoimidazole carboxylase; purine	96.91
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	96.91
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	96.91
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	96.9
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	96.9
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.9
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.9
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.88
3qy9_A	243	DHPR, dihydrodipicolinate reductase; rossmann fold	96.88
1iuk_A	140	Hypothetical protein TT1466; structural genomics,	96.86
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.86
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.86
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.85
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.84
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.83
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	96.83

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=100.00  E-value=5.9e-43  Score=298.92  Aligned_cols=277  Identities=47%  Similarity=0.842  Sum_probs=204.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+|||||||||||++|+++|+++|++|++++|+.     ....+...+.+++....+++++.+|++|.+.+.+++
T Consensus         1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   75 (337)
T 2c29_D            1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDP-----TNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAI   75 (337)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCT-----TCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHH
T ss_pred             CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCc-----chhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHH
Confidence            777789999999999999999999999999999999976     111122222222111136889999999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +++|+|||+|+.......++....+++|+.++.+++++|++.+.+++|||+||.+++++......+++|+++...+...+
T Consensus        76 ~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~  155 (337)
T 2c29_D           76 KGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRA  155 (337)
T ss_dssp             TTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHH
T ss_pred             cCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcc
Confidence            99999999999765433455446899999999999999998765789999999986655444445678887765544333


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                      ..++.++|+.||.++|.++..+++++|++++++||++||||+........+........+....+......+|+|++|+|
T Consensus       156 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva  235 (337)
T 2c29_D          156 KKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLC  235 (337)
T ss_dssp             HCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHH
T ss_pred             cCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHH
Confidence            33455689999999999999988778999999999999999765433322222211233333222211234599999999


Q ss_pred             HHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      ++++.+++++...+.|+++++.+|+.|+++.+.+.++..++|
T Consensus       236 ~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  277 (337)
T 2c29_D          236 NAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIP  277 (337)
T ss_dssp             HHHHHHHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred             HHHHHHhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCC
Confidence            999999987666678888888899999999999988654443

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=100.00  E-value=7.5e-42  Score=290.18  Aligned_cols=271  Identities=57%  Similarity=1.015  Sum_probs=197.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEec-CCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +|+|||||||||||++++++|+++|++|++++| ++     ........+..++....+++++.+|++|.+.+.++++++
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   75 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADP-----ERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGC   75 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC---------CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTC
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCc-----cchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCC
Confidence            478999999999999999999999999999998 54     111111222222111135788999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      |+|||+|+.......++...++++|+.++.+++++|++. + +++|||+||.+++++......+++|+++...++..+..
T Consensus        76 d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  154 (322)
T 2p4h_X           76 VGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVK  154 (322)
T ss_dssp             SEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHC
T ss_pred             CEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccC
Confidence            999999986543333333468999999999999999987 6 89999999998665543334567888765544433333


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA  242 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  242 (285)
                      +..+.|+.||.++|.++.++++.+|++++++||++||||+...........+.....+....+.. ..++|+|++|+|++
T Consensus       155 p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~i~v~Dva~a  233 (322)
T 2p4h_X          155 PFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARA  233 (322)
T ss_dssp             CTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE-EEEEEEEHHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC-CCcCEEEHHHHHHH
Confidence            22236999999999999998877899999999999999976543332222222223343333332 33489999999999


Q ss_pred             HHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          243 HIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      ++.+++++...|.||++++.+|+.|+++.+.+.++..++|
T Consensus       234 ~~~~~~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~  273 (322)
T 2p4h_X          234 HIYLLENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQIL  273 (322)
T ss_dssp             HHHHHHSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCC
T ss_pred             HHHHhhCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCC
Confidence            9999987655677887778899999999999988754554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=100.00  E-value=5.1e-42  Score=293.20  Aligned_cols=273  Identities=43%  Similarity=0.726  Sum_probs=193.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..     .......+..++ ...+++++.+|++|.+.+.++++++
T Consensus         8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~-----~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   81 (338)
T 2rh8_A            8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPD-----NQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGC   81 (338)
T ss_dssp             -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTT-----CTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTC
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcc-----hhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCC
Confidence            4578999999999999999999999999999999761     111111111111 1236889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC--CcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD--VDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~--~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+.......++...++++|+.++.+++++|++.+.+++|||+||.+++++....  ..+++|+++...+...+.
T Consensus        82 D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~  161 (338)
T 2rh8_A           82 DFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSA  161 (338)
T ss_dssp             SEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC------
T ss_pred             CEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhcccc
Confidence            999999997654333443358899999999999999987448999999998755433211  136788876543332222


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-------cccCccee
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-------FLLNTSMV  234 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~i  234 (285)
                      .++.++|+.||.++|.+++.+++++|++++++||++||||+.....+..+..+.....+....+.       ..+.++|+
T Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i  241 (338)
T 2rh8_A          162 KPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIA  241 (338)
T ss_dssp             -CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEE
T ss_pred             CCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEE
Confidence            22233699999999999999887789999999999999998654433333222222233222111       02234899


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      |++|+|++++.+++++...+.|+++++.+|+.|+++.+.+.++..++|
T Consensus       242 ~v~Dva~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~  289 (338)
T 2rh8_A          242 HVEDVCRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVP  289 (338)
T ss_dssp             EHHHHHHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCC
T ss_pred             EHHHHHHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCC
Confidence            999999999999987666678988887899999999999988754443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=100.00  E-value=4.7e-40  Score=277.94  Aligned_cols=240  Identities=16%  Similarity=0.202  Sum_probs=197.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|||||||||||++|+++|+++|++|++++|++        .... +       .+++++.+|++ .+.+.++++++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~-~-------~~~~~~~~Dl~-~~~~~~~~~~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSI--------GNKA-I-------NDYEYRVSDYT-LEDLINQLNDVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCC--------C-------------CCEEEECCCC-HHHHHHHTTTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCC--------Cccc-C-------CceEEEEcccc-HHHHHHhhcCCC
Confidence            57999999999999999999999999999999985        1111 1       16789999999 999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+|+.....  ++ ...+++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++.         .|
T Consensus        65 ~Vih~a~~~~~~--~~-~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg~~--~~~~~~E~~~~---------~p  129 (311)
T 3m2p_A           65 AVVHLAATRGSQ--GK-ISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYSDE--TSLPWNEKELP---------LP  129 (311)
T ss_dssp             EEEECCCCCCSS--SC-GGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCCG--GGCSBCTTSCC---------CC
T ss_pred             EEEEccccCCCC--Ch-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhCCC--CCCCCCCCCCC---------CC
Confidence            999999987664  44 3788999999999999999998 9999999999877543  34567887764         45


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccc--cccCcceeeHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYG--FLLNTSMVHVDDVAR  241 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~D~a~  241 (285)
                      .+.|+.+|.++|.+++.++++.+++++++||+++|||+....  ..+..+... ..+....+.  .+..++|+|++|+|+
T Consensus       130 ~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~  207 (311)
T 3m2p_A          130 DLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK  207 (311)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHH
Confidence            678999999999999999988899999999999999976543  344444443 334443332  366889999999999


Q ss_pred             HHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++.+++++..+++||++ ++.+|+.|+++.+++.+|.
T Consensus       208 a~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  245 (311)
T 3m2p_A          208 SVIYALKQEKVSGTFNIGSGDALTNYEVANTINNAFGN  245 (311)
T ss_dssp             HHHHHTTCTTCCEEEEECCSCEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCC
Confidence            999999988767789875 5789999999999999986

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=100.00  E-value=3.5e-40  Score=282.72  Aligned_cols=256  Identities=17%  Similarity=0.168  Sum_probs=198.6

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ++++|+|||||||||||++|+++|+++|  ++|++++|...      ......+... ....++.++.+|++|.+.+.++
T Consensus        21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~------~~~~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTY------SGNLNNVKSI-QDHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCT------TCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHH
T ss_pred             ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEecccc------ccchhhhhhh-ccCCCeEEEEcCCCCHHHHHHH
Confidence            3456899999999999999999999999  67777777541      1122222222 1235899999999999999999


Q ss_pred             hcC--CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           80 IAG--CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        80 ~~~--~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                      +++  +|+|||+|+.....  ..++ ..++++|+.++.+++++|++.+ +++|||+||.++|+.. ....+++|+++.  
T Consensus        94 ~~~~~~d~Vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~-~~~~~~~E~~~~--  168 (346)
T 4egb_A           94 IKERDVQVIVNFAAESHVDRSIENP-IPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSL-GKTGRFTEETPL--  168 (346)
T ss_dssp             HHHHTCCEEEECCCCC----------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCC-CSSCCBCTTSCC--
T ss_pred             HhhcCCCEEEECCcccchhhhhhCH-HHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCC-CcCCCcCCCCCC--
Confidence            987  99999999986642  2344 4889999999999999999998 8999999999877554 245678888764  


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccc--cccCcc
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYG--FLLNTS  232 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~  232 (285)
                             .|.+.|+.+|.++|.+++.+++++|++++++||+++|||+....  ..+..+... ..+....+.  ....++
T Consensus       169 -------~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
T 4egb_A          169 -------APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGDGLNVRD  239 (346)
T ss_dssp             -------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEEETTSCCEEC
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCceeeCCCCeEEe
Confidence                   45678999999999999999988899999999999999976432  334444333 344433332  256789


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++|+|++++.+++++..+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       240 ~i~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  286 (346)
T 4egb_A          240 WLHVTDHCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGK  286 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTC
T ss_pred             eEEHHHHHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCC
Confidence            9999999999999999887667898765 579999999999998886

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=100.00  E-value=2e-40  Score=284.72  Aligned_cols=258  Identities=19%  Similarity=0.195  Sum_probs=202.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCC--CCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA--SERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..    ........+......  ..+++++.+|++|.+.+.++++
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   99 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST----GHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK   99 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC----CchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc
Confidence            5689999999999999999999999999999999761    111111222211000  0479999999999999999999


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+|+....  ...++ ...+++|+.++.+++++|++.+ +++|||+||.++|+..  ...+++|+++.      
T Consensus       100 ~~d~Vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~------  169 (351)
T 3ruf_A          100 GVDHVLHQAALGSVPRSIVDP-ITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYGDH--PALPKVEENIG------  169 (351)
T ss_dssp             TCSEEEECCCCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCC------
T ss_pred             CCCEEEECCccCCcchhhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcCCC--CCCCCccCCCC------
Confidence            99999999997553  22334 4789999999999999999998 9999999999887544  34578888764      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHH-HHhcCccccc--cccCccee
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLA-LILGNREEYG--FLLNTSMV  234 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i  234 (285)
                         .|.+.|+.+|.++|.+++.++++.|++++++||++||||+....  ....+..+.. ...+....+.  .+..++|+
T Consensus       170 ---~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  246 (351)
T 3ruf_A          170 ---NPLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFC  246 (351)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeE
Confidence               45678999999999999999988899999999999999976543  1234444433 3344443332  25688999


Q ss_pred             eHHHHHHHHHHhhcCC--CCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYP--DAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~--~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|+|++++.++...  ..+++||++ ++.+|+.|+++.+++.+|.
T Consensus       247 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  293 (351)
T 3ruf_A          247 YIDNVIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNL  293 (351)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHT
T ss_pred             EHHHHHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCc
Confidence            9999999999999872  345689875 5789999999999998876

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.7e-39  Score=276.69  Aligned_cols=248  Identities=21%  Similarity=0.271  Sum_probs=187.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|||||||||||++|+++|+++|++|++++|++        .....+..     .+++++.+|++|.+.+.++++++|
T Consensus        13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~~~d   79 (342)
T 2x4g_A           13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPS--------SQIQRLAY-----LEPECRVAEMLDHAGLERALRGLD   79 (342)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTT--------SCGGGGGG-----GCCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCh--------Hhhhhhcc-----CCeEEEEecCCCHHHHHHHHcCCC
Confidence            46899999999999999999999999999999987        22222222     267899999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+|+.......++ ...+++|+.++.++++++++.+ +++|||+||.++|+.......+ +|+++..+.     ...
T Consensus        80 ~vih~a~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-~E~~~~~p~-----~~~  151 (342)
T 2x4g_A           80 GVIFSAGYYPSRPRRW-QEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPG-HEGLFYDSL-----PSG  151 (342)
T ss_dssp             EEEEC-------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCB-CTTCCCSSC-----CTT
T ss_pred             EEEECCccCcCCCCCH-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCC-CCCCCCCcc-----ccc
Confidence            9999999766433344 4789999999999999999988 8999999999987654332234 777764210     001


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCC-CCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI-CPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAH  243 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  243 (285)
                      .+.|+.+|.++|.+++.+++. |++++++||+.+|||+. ...   ....+.....+....+ .+..++|+|++|+|+++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPT---TGRVITAIGNGEMTHY-VAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCS---TTHHHHHHHTTCCCEE-ECCEEEEEEHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCcccc---HHHHHHHHHcCCCccc-cCCCcceeeHHHHHHHH
Confidence            578999999999999998876 99999999999999976 211   1122222333433333 46678999999999999


Q ss_pred             HHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          244 IFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +.+++++..+++||++++.+|+.|+++.+.+.+|.
T Consensus       227 ~~~~~~~~~g~~~~v~~~~~s~~e~~~~i~~~~g~  261 (342)
T 2x4g_A          227 LMALERGRIGERYLLTGHNLEMADLTRRIAELLGQ  261 (342)
T ss_dssp             HHHHHHSCTTCEEEECCEEEEHHHHHHHHHHHHTC
T ss_pred             HHHHhCCCCCceEEEcCCcccHHHHHHHHHHHhCC
Confidence            99998776666898765449999999999998875

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=100.00  E-value=1.3e-39  Score=279.28  Aligned_cols=245  Identities=17%  Similarity=0.167  Sum_probs=198.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..        .           .++.++.+|++|.+.+.++++++
T Consensus        18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~--------~-----------~~~~~~~~Dl~d~~~~~~~~~~~   78 (347)
T 4id9_A           18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS--------G-----------TGGEEVVGSLEDGQALSDAIMGV   78 (347)
T ss_dssp             ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC--------S-----------SCCSEEESCTTCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC--------C-----------CCccEEecCcCCHHHHHHHHhCC
Confidence            4689999999999999999999999999999999871        1           36788999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+|+........+ ...+++|+.++.++++++++.+ +++|||+||.++|+.......+++|+++.         .
T Consensus        79 d~vih~A~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~~~---------~  147 (347)
T 4id9_A           79 SAVLHLGAFMSWAPADR-DRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDHPL---------C  147 (347)
T ss_dssp             SEEEECCCCCCSSGGGH-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTSCC---------C
T ss_pred             CEEEECCcccCcchhhH-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCCCC---------C
Confidence            99999999877654444 5899999999999999999988 99999999999886644456678888764         4


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCcee-------------cCCCCCC---------CCccHHHHHHHHhcC
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVV-------------GPFICPK---------FAGSVRSSLALILGN  221 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~-------------g~~~~~~---------~~~~~~~~~~~~~~~  221 (285)
                      +.+.|+.+|.++|.+++.++++.+++++++||+++|             ||+....         ....+..+.......
T Consensus       148 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (347)
T 4id9_A          148 PNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIG  227 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcC
Confidence            567899999999999999998889999999999999             7653221         122333334333333


Q ss_pred             -ccccc--cccCcce----eeHHHHHHHHHHhhcCC-CCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          222 -REEYG--FLLNTSM----VHVDDVARAHIFLLEYP-DAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       222 -~~~~~--~~~~~~~----i~~~D~a~~~~~~~~~~-~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                       ...+.  ....++|    +|++|+|++++.+++++ ..+++||++ ++.+|+.|+++.+++.+|.
T Consensus       228 ~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  293 (347)
T 4id9_A          228 EPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGL  293 (347)
T ss_dssp             SCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCC
T ss_pred             CCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCC
Confidence             22222  2557788    99999999999999987 446689875 5689999999999998875

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=100.00  E-value=9.3e-39  Score=270.18  Aligned_cols=243  Identities=21%  Similarity=0.251  Sum_probs=191.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||+|||||||||||++|+++|+++| .++++++...       .....+      ...+.++.+|++| +++.++++++|
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~-------~~~~~~------~~~~~~~~~Dl~~-~~~~~~~~~~d   65 (313)
T 3ehe_A            1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSS-------GNEEFV------NEAARLVKADLAA-DDIKDYLKGAE   65 (313)
T ss_dssp             --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSS-------CCGGGS------CTTEEEECCCTTT-SCCHHHHTTCS
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCC-------CChhhc------CCCcEEEECcCCh-HHHHHHhcCCC
Confidence            3689999999999999999999999 5555555431       111111      2378999999999 99999999999


Q ss_pred             EEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|||+|+....  ...++ ...+++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+.+.         
T Consensus        66 ~vih~a~~~~~~~~~~~~-~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg~~--~~~~~~E~~~~---------  132 (313)
T 3ehe_A           66 EVWHIAANPDVRIGAENP-DEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYGEA--KVIPTPEDYPT---------  132 (313)
T ss_dssp             EEEECCCCCCCC-CCCCH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGCSC--SSSSBCTTSCC---------
T ss_pred             EEEECCCCCChhhhhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhCcC--CCCCCCCCCCC---------
Confidence            99999997543  34455 5899999999999999999998 8999999999887543  34567777653         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCc-cccc--cccCcceeeHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNR-EEYG--FLLNTSMVHVDD  238 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~-~~~~--~~~~~~~i~~~D  238 (285)
                      .+.+.|+.+|.++|.+++.+++++|++++++||+++|||+...   ..+..+... ..+.. ..+.  ....++|+|++|
T Consensus       133 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D  209 (313)
T 3ehe_A          133 HPISLYGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTH---GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISD  209 (313)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCC---SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCc---ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHH
Confidence            4567899999999999999998899999999999999997653   234333333 33322 2122  256789999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|++++.+++....+++||+++ +.+|+.|+++.+++.+|.
T Consensus       210 va~a~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  250 (313)
T 3ehe_A          210 CVDAMLFGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGL  250 (313)
T ss_dssp             HHHHHHHHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCC
Confidence            9999999999655667898654 689999999999999975

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-38  Score=272.63  Aligned_cols=256  Identities=21%  Similarity=0.244  Sum_probs=198.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+|||||||||||++++++|+++|++|++++|+..    ...+....+...  ...++.++.+|++|.+.+.++++  
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~----~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~   77 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN----SKREAIARIEKI--TGKTPAFHETDVSDERALARIFDAH   77 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS----SCTHHHHHHHHH--HSCCCEEECCCTTCHHHHHHHHHHS
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc----chHHHHHHHHhh--cCCCceEEEeecCCHHHHHHHHhcc
Confidence            5689999999999999999999999999999999762    111111111111  12378899999999999999998  


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+|+....  ....+ ...++.|+.++.++++++++.+ +++||++||.++|+..  ...+++|+.+.      
T Consensus        78 ~~d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~e~~~~------  147 (341)
T 3enk_A           78 PITAAIHFAALKAVGESVAKP-IEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYGVP--ERSPIDETFPL------  147 (341)
T ss_dssp             CCCEEEECCCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBCSC--SSSSBCTTSCC------
T ss_pred             CCcEEEECccccccCccccCh-HHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEecCC--CCCCCCCCCCC------
Confidence            79999999998654  12233 4788999999999999999988 8999999999877443  44567887764      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcC-CcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcCcccc-----
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHG-LDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREEY-----  225 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~-----  225 (285)
                         .+.+.|+.||.++|.+++.++.+++ ++++++||+++|||.....        ....+..+.....+....+     
T Consensus       148 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (341)
T 3enk_A          148 ---SATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGS  224 (341)
T ss_dssp             ---BCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECS
T ss_pred             ---CCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCC
Confidence               3567899999999999999988875 9999999999999964321        1233444444444433222     


Q ss_pred             -----ccccCcceeeHHHHHHHHHHhhcC---CCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          226 -----GFLLNTSMVHVDDVARAHIFLLEY---PDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 -----~~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                           ..+..++|+|++|+|++++.++++   ...+++||++ ++.+|+.|+++.+.+.+|.
T Consensus       225 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  286 (341)
T 3enk_A          225 DYPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR  286 (341)
T ss_dssp             CSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS
T ss_pred             ccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC
Confidence                 235678999999999999999986   2346689875 5789999999999998875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=100.00  E-value=6.1e-39  Score=276.67  Aligned_cols=255  Identities=19%  Similarity=0.144  Sum_probs=195.7

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHH--cCCeEEEEecCCCCcccc--CccchhhhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLD--HGYSVTTTVRSELDPEHR--NSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .++|+|||||||||||++|+++|++  .|++|++++|+.......  ..+........  ...++.++.+|++|++.+.+
T Consensus         8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNL--IGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGG--TTCCSEEEECCTTCHHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhc--cccCceEEECCCCCHHHHHH
Confidence            3568999999999999999999999  899999999976200000  00000111111  12367899999999999999


Q ss_pred             H-hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           79 A-IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        79 ~-~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                      + ..++|+|||+||.......++ ...+++|+.++.++++++++.+ ++ |||+||.++|+...   .+++|+++.    
T Consensus        86 ~~~~~~D~vih~A~~~~~~~~~~-~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg~~~---~~~~E~~~~----  155 (362)
T 3sxp_A           86 LEKLHFDYLFHQAAVSDTTMLNQ-ELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYGNTK---APNVVGKNE----  155 (362)
T ss_dssp             HTTSCCSEEEECCCCCGGGCCCH-HHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGCSCC---SSBCTTSCC----
T ss_pred             hhccCCCEEEECCccCCccccCH-HHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhCCCC---CCCCCCCCC----
Confidence            9 778999999999877655566 4999999999999999999988 65 99999988775542   278888753    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC--CccHHHHHHH-HhcCcccccc--ccCcc
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSSLAL-ILGNREEYGF--LLNTS  232 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~~~~-~~~~~~~~~~--~~~~~  232 (285)
                           .|.++|+.||.++|.+++.++.+  ++++++||+++|||+.....  ...+..+... ..+....+..  ...++
T Consensus       156 -----~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  228 (362)
T 3sxp_A          156 -----SPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRD  228 (362)
T ss_dssp             -----CCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEE
T ss_pred             -----CCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEc
Confidence                 45688999999999999988754  99999999999999865431  1344444433 3344333322  56789


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  277 (285)
                      |+|++|+|++++.+++.+.. |+||++ ++.+|+.|+++.+.+.+|
T Consensus       229 ~i~v~Dva~ai~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g  273 (362)
T 3sxp_A          229 FVYIEDVIQANVKAMKAQKS-GVYNVGYSQARSYNEIVSILKEHLG  273 (362)
T ss_dssp             CEEHHHHHHHHHHHTTCSSC-EEEEESCSCEEEHHHHHHHHHHHHC
T ss_pred             cEEHHHHHHHHHHHHhcCCC-CEEEeCCCCCccHHHHHHHHHHHcC
Confidence            99999999999999998755 499875 578999999999999888

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=100.00  E-value=7.8e-39  Score=270.47  Aligned_cols=242  Identities=21%  Similarity=0.229  Sum_probs=192.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|||||||||||++|+++|+++|++|++++|+.        .......     ..+++++.+|++|.+ +.+++++ |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLS--------SGRREFV-----NPSAELHVRDLKDYS-WGAGIKG-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCS--------SCCGGGS-----CTTSEEECCCTTSTT-TTTTCCC-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCC--------CCchhhc-----CCCceEEECccccHH-HHhhcCC-CE
Confidence            5899999999999999999999999999999976        1111111     237889999999998 8888877 99


Q ss_pred             EEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           86 VLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        86 vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |||+|+....  ...++ ...+++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++.         .
T Consensus        66 vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg~~--~~~~~~e~~~~---------~  132 (312)
T 3ko8_A           66 VFHFAANPEVRLSTTEP-IVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYGDA--DVIPTPEEEPY---------K  132 (312)
T ss_dssp             EEECCSSCSSSGGGSCH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--SSSSBCTTSCC---------C
T ss_pred             EEECCCCCCchhhhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhCCC--CCCCCCCCCCC---------C
Confidence            9999997543  33445 4889999999999999999998 8999999999987544  34567777653         4


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHH-hcCcc-ccc--cccCcceeeHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-LGNRE-EYG--FLLNTSMVHVDDV  239 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~-~~~--~~~~~~~i~~~D~  239 (285)
                      |.+.|+.+|.++|.+++.+++++|++++++||+++|||+...   ..+..+.... .+... ...  ....++|+|++|+
T Consensus       133 p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv  209 (312)
T 3ko8_A          133 PISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH---GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDA  209 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCS---SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCC---ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHH
Confidence            567899999999999999998889999999999999997543   2333333333 33221 122  2467899999999


Q ss_pred             HHHHHHhhcC----CCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          240 ARAHIFLLEY----PDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       240 a~~~~~~~~~----~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |++++.++++    ...+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       210 a~a~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  253 (312)
T 3ko8_A          210 VEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGL  253 (312)
T ss_dssp             HHHHHHHHHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCC
Confidence            9999999987    33456788765 689999999999998875

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=100.00  E-value=3.3e-39  Score=272.72  Aligned_cols=248  Identities=17%  Similarity=0.154  Sum_probs=195.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+|||||||||||++|+++|+++  |++|++++|+..        .....       .+++++.+|++|.+++.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~--------~~~~~-------~~~~~~~~D~~d~~~~~~~~~~   66 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKL--------NTDVV-------NSGPFEVVNALDFNQIEHLVEV   66 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCC--------SCHHH-------HSSCEEECCTTCHHHHHHHHHH
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCc--------ccccc-------CCCceEEecCCCHHHHHHHHhh
Confidence            478999999999999999999998  899999999862        11111       145688999999999999998 


Q ss_pred             -CCCEEEEecccCCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 -GCTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 -~~d~vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                       ++|+|||+|+..... ..++ ...+++|+.++.++++++++.+ +++|||+||.++|+... ...+.+|+++.      
T Consensus        67 ~~~d~vih~a~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~~~------  137 (312)
T 2yy7_A           67 HKITDIYLMAALLSATAEKNP-AFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTT-PKENTPQYTIM------  137 (312)
T ss_dssp             TTCCEEEECCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTS-CSSSBCSSCBC------
T ss_pred             cCCCEEEECCccCCCchhhCh-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCC-CCCCccccCcC------
Confidence             899999999975431 1233 4889999999999999999988 89999999999875532 23456676643      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC---CccHHHHHHHHhcCcccc--ccccCccee
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF---AGSVRSSLALILGNREEY--GFLLNTSMV  234 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~i  234 (285)
                         .|.++|+.+|.++|.+++.++++++++++++||+++|||...+..   ......+.....+.....  ..+..++|+
T Consensus       138 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (312)
T 2yy7_A          138 ---EPSTVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMM  214 (312)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEE
T ss_pred             ---CCCchhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeee
Confidence               356789999999999999998888999999999999998643321   123333444444443322  235688999


Q ss_pred             eHHHHHHHHHHhhcCCCC----CceEEEeccccCHHHHHHHHHhhCCCC
Q 023244          235 HVDDVARAHIFLLEYPDA----KGRYICSSHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~----~~~~~~~~~~~s~~e~~~~i~~~~~~~  279 (285)
                      |++|+|++++.+++++..    +++||++++.+|+.|+++.+.+.+|..
T Consensus       215 ~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~  263 (312)
T 2yy7_A          215 YMDDAIDATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEF  263 (312)
T ss_dssp             EHHHHHHHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTC
T ss_pred             eHHHHHHHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCC
Confidence            999999999999987653    368998778899999999999998853

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=100.00  E-value=5.3e-38  Score=272.35  Aligned_cols=254  Identities=17%  Similarity=0.120  Sum_probs=197.0

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..+||+|||||||||||++|+++|+++|++|++++|+..        ......     ..+++++.+|++|.+.+.++++
T Consensus        26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~-----~~~v~~~~~Dl~d~~~~~~~~~   92 (379)
T 2c5a_A           26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN--------EHMTED-----MFCDEFHLVDLRVMENCLKVTE   92 (379)
T ss_dssp             TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------SSSCGG-----GTCSEEEECCTTSHHHHHHHHT
T ss_pred             cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCc--------cchhhc-----cCCceEEECCCCCHHHHHHHhC
Confidence            345689999999999999999999999999999999861        111111     1367899999999999999999


Q ss_pred             CCCEEEEecccCCCC---CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC---CCcccccCCCCch
Q 023244           82 GCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK---DVDMMDETFWSDV  155 (285)
Q Consensus        82 ~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~---~~~~~~e~~~~~~  155 (285)
                      ++|+|||+|+.....   ..++ ...+++|+.++.++++++++.+ +++|||+||.++|+....   ...+++|+++.  
T Consensus        93 ~~d~Vih~A~~~~~~~~~~~~~-~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~--  168 (379)
T 2c5a_A           93 GVDHVFNLAADMGGMGFIQSNH-SVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAW--  168 (379)
T ss_dssp             TCSEEEECCCCCCCHHHHTTCH-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS--
T ss_pred             CCCEEEECceecCcccccccCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCC--
Confidence            999999999976531   2344 5889999999999999999888 899999999987754321   12346666521  


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC--ccHHHHHHHH-hcCc-cccc--ccc
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSVRSSLALI-LGNR-EEYG--FLL  229 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~~-~~~~-~~~~--~~~  229 (285)
                           +..+.+.|+.+|.++|.+++.++++++++++++||+++|||+......  ..+..+.... .+.. ..+.  ...
T Consensus       169 -----~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~  243 (379)
T 2c5a_A          169 -----PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQ  243 (379)
T ss_dssp             -----SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCC
T ss_pred             -----CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCe
Confidence                 123567899999999999999988889999999999999997543211  2333333333 3433 2222  245


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+|++++.+++++ .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       244 ~~~~i~v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~  292 (379)
T 2c5a_A          244 TRSFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK  292 (379)
T ss_dssp             EECCEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC
T ss_pred             eEEEEEHHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCC
Confidence            789999999999999999876 456888654 789999999999999885

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=100.00  E-value=4.7e-38  Score=266.70  Aligned_cols=246  Identities=17%  Similarity=0.148  Sum_probs=194.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..        . ..   +     ++.++.+|++|++.+.+++++ 
T Consensus        11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~--------~-~~---l-----~~~~~~~Dl~d~~~~~~~~~~~   73 (321)
T 2pk3_A           11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNE--------A-KL---P-----NVEMISLDIMDSQRVKKVISDI   73 (321)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTT--------C-CC---T-----TEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc--------c-cc---c-----eeeEEECCCCCHHHHHHHHHhc
Confidence            4589999999999999999999999999999999871        1 10   1     688999999999999999986 


Q ss_pred             -CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                       +|+|||+|+....  ...++ ...+++|+.++.++++++++.+.+++|||+||.++|+.......+++|+++.      
T Consensus        74 ~~d~vih~A~~~~~~~~~~~~-~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~------  146 (321)
T 2pk3_A           74 KPDYIFHLAAKSSVKDSWLNK-KGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL------  146 (321)
T ss_dssp             CCSEEEECCSCCCHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC------
T ss_pred             CCCEEEEcCcccchhhhhhcH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC------
Confidence             9999999998653  23344 4899999999999999998762379999999998775432134577888764      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHH-h---c--Cccccc--cccCc
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-L---G--NREEYG--FLLNT  231 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~---~--~~~~~~--~~~~~  231 (285)
                         .+.+.|+.+|.++|.+++.+++++|++++++||+++|||+....  ..+..+.... .   +  ......  ....+
T Consensus       147 ---~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  221 (321)
T 2pk3_A          147 ---RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLG--FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVR  221 (321)
T ss_dssp             ---BCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHHTTSSCSEEEESCSSCEE
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCC--chHHHHHHHHHHHhcCCCCCeEEeCCCCcEE
Confidence               35678999999999999999888899999999999999976432  2233222222 2   3  222221  24578


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|+|++++.+++++..+++||+++ ..+|+.|+++.+.+.+|.
T Consensus       222 ~~v~v~Dva~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  269 (321)
T 2pk3_A          222 DFTDVRDIVQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANV  269 (321)
T ss_dssp             EEEEHHHHHHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSS
T ss_pred             eeEEHHHHHHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCC
Confidence            99999999999999998765567898765 689999999999999875

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.1e-38  Score=276.04  Aligned_cols=255  Identities=20%  Similarity=0.265  Sum_probs=198.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC-ChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~   81 (285)
                      ++|+|||||||||||++|+++|+++ |++|++++|+.        +....+..    ..+++++.+|++ |.+.+.++++
T Consensus        23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~--------~~~~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~   90 (372)
T 3slg_A           23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQT--------DRLGDLVK----HERMHFFEGDITINKEWVEYHVK   90 (372)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCC--------TTTGGGGG----STTEEEEECCTTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCCh--------hhhhhhcc----CCCeEEEeCccCCCHHHHHHHhc
Confidence            4689999999999999999999998 99999999987        22222222    138999999999 9999999999


Q ss_pred             CCCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+|+.....  ..++ ...+++|+.++.+++++|++.+  ++|||+||.++|+..  ...+++|+++...  ..
T Consensus        91 ~~d~Vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg~~--~~~~~~e~~~~~~--~~  163 (372)
T 3slg_A           91 KCDVILPLVAIATPATYVKQP-LRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYGMC--ADEQFDPDASALT--YG  163 (372)
T ss_dssp             HCSEEEECBCCCCHHHHHHCH-HHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGBSC--CCSSBCTTTCCEE--EC
T ss_pred             cCCEEEEcCccccHHHHhhCH-HHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhCCC--CCCCCCccccccc--cC
Confidence            999999999986642  2344 3788999999999999999988  899999999877554  2345666653210  01


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC------CCccHHHHHH-HHhcCcccccc--ccC
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSLA-LILGNREEYGF--LLN  230 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~------~~~~~~~~~~-~~~~~~~~~~~--~~~  230 (285)
                      +...|.+.|+.+|.++|.+++.++++ +++++++||++||||+....      ....+..+.. ...+....+..  +..
T Consensus       164 p~~~p~~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  242 (372)
T 3slg_A          164 PINKPRWIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQK  242 (372)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCE
T ss_pred             CCCCCCCcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceE
Confidence            11245678999999999999999877 99999999999999986532      1223444433 33444433332  667


Q ss_pred             cceeeHHHHHHHHHHhhcCCC---CCceEEEec--cccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPD---AKGRYICSS--HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~--~~~s~~e~~~~i~~~~~~  278 (285)
                      ++|+|++|+|++++.+++++.   .+++||+++  +.+|+.|+++.+.+.+|.
T Consensus       243 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~  295 (372)
T 3slg_A          243 RAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAE  295 (372)
T ss_dssp             EECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCC
Confidence            899999999999999999874   456898766  489999999999998764

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=100.00  E-value=4.5e-38  Score=267.83  Aligned_cols=248  Identities=19%  Similarity=0.241  Sum_probs=194.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      ||+|||||||||||++++++|+++|++|++++|+..       ...   ..+.   .+++++.+|++|.+.+.++++  +
T Consensus         1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~---~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   67 (330)
T 2c20_A            1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQT-------GHE---DAIT---EGAKFYNGDLRDKAFLRDVFTQEN   67 (330)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-------CCG---GGSC---TTSEEEECCTTCHHHHHHHHHHSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCc-------Cch---hhcC---CCcEEEECCCCCHHHHHHHHhhcC
Confidence            368999999999999999999999999999998761       111   1111   268899999999999999998  8


Q ss_pred             CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|+|||+|+.....  ..++ ..++++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++.       
T Consensus        68 ~d~vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~~~--~~~~~~E~~~~-------  136 (330)
T 2c20_A           68 IEAVMHFAADSLVGVSMEKP-LQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYGEV--DVDLITEETMT-------  136 (330)
T ss_dssp             EEEEEECCCCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGCSC--SSSSBCTTSCC-------
T ss_pred             CCEEEECCcccCccccccCH-HHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeCCC--CCCCCCcCCCC-------
Confidence            99999999976531  1234 4789999999999999999888 8999999999876543  34577888764       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-------CCccHHHHHHHHhcCcccc--------
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------FAGSVRSSLALILGNREEY--------  225 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~--------  225 (285)
                        .+.+.|+.+|.++|.+++.++++++++++++||+++|||+....       ...++..+.....+....+        
T Consensus       137 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  214 (330)
T 2c20_A          137 --NPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYN  214 (330)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCS
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccc
Confidence              35678999999999999999888899999999999999964321       1234444444444332211        


Q ss_pred             --ccccCcceeeHHHHHHHHHHhhcCCC---CCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          226 --GFLLNTSMVHVDDVARAHIFLLEYPD---AKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 --~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                        ..+..++|+|++|+|++++.+++++.   .+++||++ ++.+|+.|+++.+.+.+|.
T Consensus       215 ~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  273 (330)
T 2c20_A          215 TPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH  273 (330)
T ss_dssp             SSSSSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS
T ss_pred             cCCCceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC
Confidence              12457899999999999999997642   24689875 5789999999999999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=100.00  E-value=6.4e-38  Score=268.81  Aligned_cols=256  Identities=15%  Similarity=0.178  Sum_probs=196.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |++ ||+|||||||||||++|+++|+++  |++|++++|+..     . .....+....  ..++.++.+|++|.+.+.+
T Consensus         1 Ms~-m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~-----~-~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~   71 (348)
T 1oc2_A            1 MSQ-FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY-----A-GNKANLEAIL--GDRVELVVGDIADAELVDK   71 (348)
T ss_dssp             --C-CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT-----T-CCGGGTGGGC--SSSEEEEECCTTCHHHHHH
T ss_pred             CCc-CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCC-----C-CChhHHhhhc--cCCeEEEECCCCCHHHHHH
Confidence            653 579999999999999999999998  899999999651     0 1111122221  2478999999999999999


Q ss_pred             HhcCCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC----------CCcc
Q 023244           79 AIAGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----------DVDM  146 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----------~~~~  146 (285)
                      +++++|+|||+|+....  ...++ +..+++|+.++.++++++.+.+ + +|||+||.++|+....          ...+
T Consensus        72 ~~~~~d~vih~A~~~~~~~~~~~~-~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~  148 (348)
T 1oc2_A           72 LAAKADAIVHYAAESHNDNSLNDP-SPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEK  148 (348)
T ss_dssp             HHTTCSEEEECCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSS
T ss_pred             HhhcCCEEEECCcccCccchhhCH-HHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCC
Confidence            99999999999997653  11233 4889999999999999999988 6 9999999988754321          1146


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCcccc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEY  225 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~  225 (285)
                      ++|+++.         .+.+.|+.+|.++|.+++.+++++|++++++||+.+|||+....  ..+..+.. ...+....+
T Consensus       149 ~~E~~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~  217 (348)
T 1oc2_A          149 FTAETNY---------NPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKL  217 (348)
T ss_dssp             BCTTSCC---------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEE
T ss_pred             cCCCCCC---------CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceE
Confidence            6776653         35678999999999999999888899999999999999975421  23333332 333443332


Q ss_pred             c--cccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          226 G--FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       226 ~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      .  ....++|+|++|+|++++.+++.+..+++||+++ ..+|+.|+++.+.+.+|..
T Consensus       218 ~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  274 (348)
T 1oc2_A          218 YGEGKNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQP  274 (348)
T ss_dssp             ETTSCCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             ecCCCceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence            2  2457799999999999999998765566898765 6899999999999998863

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=100.00  E-value=1.4e-37  Score=265.35  Aligned_cols=253  Identities=19%  Similarity=0.203  Sum_probs=194.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +|+|||||||||||++++++|+++|  ++|++++|...     . .....+.++. ...++.++.+|++|.+.+.+++.+
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~-----~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   75 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGY-----G-SNPANLKDLE-DDPRYTFVKGDVADYELVKELVRK   75 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT-----T-CCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHT
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcc-----c-CchhHHhhhc-cCCceEEEEcCCCCHHHHHHHhhC
Confidence            4689999999999999999999986  89999998641     0 1111222221 134789999999999999999999


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|+|||+|+....  ...++ ..++++|+.++.++++++.+.+..++|||+||.++|+...  ..+++|+++.       
T Consensus        76 ~d~vih~A~~~~~~~~~~~~-~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~--~~~~~E~~~~-------  145 (336)
T 2hun_A           76 VDGVVHLAAESHVDRSISSP-EIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDIL--KGSFTENDRL-------  145 (336)
T ss_dssp             CSEEEECCCCCCHHHHHHCT-HHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCS--SSCBCTTBCC-------
T ss_pred             CCEEEECCCCcChhhhhhCH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCC--CCCcCCCCCC-------
Confidence            9999999997653  12233 4789999999999999999886347999999998775432  3467777653       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccc--cccCcceeeHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYG--FLLNTSMVHVD  237 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~  237 (285)
                        .+.+.|+.+|.++|.+++.++++++++++++||+++|||+...  ...+..+... ..+....+.  ....++|+|++
T Consensus       146 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  221 (336)
T 2hun_A          146 --MPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFP--EKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVE  221 (336)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCT--TSHHHHHHHHHHTTCCEEEETC---CEEEEEHH
T ss_pred             --CCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCc--CchHHHHHHHHHcCCCceEeCCCCceeeeEEHH
Confidence              3567899999999999999998889999999999999997542  1233333333 333333322  24578999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++++.+++++..+++||+++ ..+|+.|+++.+.+.+|.
T Consensus       222 Dva~~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~  263 (336)
T 2hun_A          222 DHVRAIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGK  263 (336)
T ss_dssp             HHHHHHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCC
Confidence            99999999998765566898765 579999999999999886

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=100.00  E-value=5.2e-38  Score=270.31  Aligned_cols=255  Identities=18%  Similarity=0.141  Sum_probs=194.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..     .....  ..... ...++.++.+|++|++.+.+++++ 
T Consensus         8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~~~~--~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   79 (357)
T 1rkx_A            8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP-----TVPSL--FETAR-VADGMQSEIGDIRDQNKLLESIREF   79 (357)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCS-----SSSCH--HHHTT-TTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCc-----ccchh--hHhhc-cCCceEEEEccccCHHHHHHHHHhc
Confidence            3579999999999999999999999999999999861     11111  11111 134788999999999999999986 


Q ss_pred             -CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                       +|+|||+|+....  ...++ ...+++|+.++.++++++++.+.+++|||+||.++|+... ...+++|+++.      
T Consensus        80 ~~d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~-~~~~~~E~~~~------  151 (357)
T 1rkx_A           80 QPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKE-WIWGYRENEAM------  151 (357)
T ss_dssp             CCSEEEECCSCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCC-SSSCBCTTSCB------
T ss_pred             CCCEEEECCCCcccccchhCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCC-cCCCCCCCCCC------
Confidence             8999999996432  12234 4889999999999999999875578999999999875432 22356666543      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHc---------CCcEEEeccCceecCCCCCCCCccHHHHHHHH-hcCccccc-cc
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEH---------GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-LGNREEYG-FL  228 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~---------~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~  228 (285)
                         .+.+.|+.+|.++|.+++.++.++         |++++++||+++|||+.... ...+..+.... .+....+. .+
T Consensus       152 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~  227 (357)
T 1rkx_A          152 ---GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPH  227 (357)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTT
T ss_pred             ---CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCC
Confidence               356789999999999999988764         99999999999999975432 23444444433 34433332 35


Q ss_pred             cCcceeeHHHHHHHHHHhhcC----C-CCCceEEEec---cccCHHHHHHHHHhhCCC
Q 023244          229 LNTSMVHVDDVARAHIFLLEY----P-DAKGRYICSS---HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~----~-~~~~~~~~~~---~~~s~~e~~~~i~~~~~~  278 (285)
                      ..++|+|++|+|++++.+++.    + ..+++||+++   +.+|+.|+++.+.+.+|.
T Consensus       228 ~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~  285 (357)
T 1rkx_A          228 AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE  285 (357)
T ss_dssp             CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT
T ss_pred             CeeccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCC
Confidence            678999999999999999874    2 3456899763   579999999999998875

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=100.00  E-value=8.1e-38  Score=268.62  Aligned_cols=256  Identities=18%  Similarity=0.164  Sum_probs=196.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..    ...+....+. .... ...++.++.+|++|.+.+.++++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT----GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCc----cchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            4689999999999999999999999999999999761    0011111111 1100 01378999999999999999999


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+|+....  ...++ ...+++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++.      
T Consensus       102 ~~d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~--~~~~~~E~~~~------  171 (352)
T 1sb8_A          102 GVDYVLHQAALGSVPRSINDP-ITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH--PGLPKVEDTIG------  171 (352)
T ss_dssp             TCSEEEECCSCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCC------
T ss_pred             CCCEEEECCcccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcCCC--CCCCCCCCCCC------
Confidence            99999999997543  12234 4789999999999999999988 8999999999986543  23467787763      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHH-HHhcCccccc--cccCccee
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLA-LILGNREEYG--FLLNTSMV  234 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i  234 (285)
                         .|.+.|+.+|.++|.+++.++++++++++++||+++|||+....  ....+..+.. ...+....+.  .+..++|+
T Consensus       172 ---~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  248 (352)
T 1sb8_A          172 ---KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  248 (352)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeE
Confidence               35678999999999999999888899999999999999976432  2233333333 3334433222  24578999


Q ss_pred             eHHHHHHHHHHhhcCC--CCCceEEEe-ccccCHHHHHHHHHhhC
Q 023244          235 HVDDVARAHIFLLEYP--DAKGRYICS-SHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~--~~~~~~~~~-~~~~s~~e~~~~i~~~~  276 (285)
                      |++|+|++++.++...  ..+++||++ ++.+|+.|+++.+.+.+
T Consensus       249 ~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~  293 (352)
T 1sb8_A          249 YIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGL  293 (352)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHH
T ss_pred             EHHHHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHH
Confidence            9999999999998763  245678875 56899999999999988

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=100.00  E-value=2.3e-37  Score=264.29  Aligned_cols=251  Identities=24%  Similarity=0.252  Sum_probs=195.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc---C---CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH---G---YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+|||||||||||++++++|+++   |   ++|++++|+..     . .....+..+. ...++.++.+|++|++.+.++
T Consensus         1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~-----~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~   73 (337)
T 1r6d_A            1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTY-----A-GNRANLAPVD-ADPRLRFVHGDIRDAGLLARE   73 (337)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCT-----T-CCGGGGGGGT-TCTTEEEEECCTTCHHHHHHH
T ss_pred             CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCc-----c-Cchhhhhhcc-cCCCeEEEEcCCCCHHHHHHH
Confidence            47999999999999999999996   8   99999999651     0 0111122211 124789999999999999999


Q ss_pred             hcCCCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           80 IAGCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                      +.++|+|||+|+.....  ..++ +.++++|+.++.++++++++.+ +++|||+||.++|+...  ..+++|+++.    
T Consensus        74 ~~~~d~Vih~A~~~~~~~~~~~~-~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~~~--~~~~~E~~~~----  145 (337)
T 1r6d_A           74 LRGVDAIVHFAAESHVDRSIAGA-SVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSID--SGSWTESSPL----  145 (337)
T ss_dssp             TTTCCEEEECCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCCS--SSCBCTTSCC----
T ss_pred             hcCCCEEEECCCccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCCCC--CCCCCCCCCC----
Confidence            99999999999976531  1233 4789999999999999999988 89999999998775432  3567777653    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccc--cccCccee
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYG--FLLNTSMV  234 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i  234 (285)
                           .+.+.|+.+|.++|.+++.++++++++++++||+++|||+...  ...+..+... ..+....+.  .+..++|+
T Consensus       146 -----~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (337)
T 1r6d_A          146 -----EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (337)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             -----CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCC--CChHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence                 3567899999999999999988889999999999999997543  1233333333 334333322  24568999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|+|++++.+++++..+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       219 ~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~  263 (337)
T 1r6d_A          219 HTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGA  263 (337)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTC
T ss_pred             eHHHHHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCC
Confidence            99999999999998765566898765 579999999999998875

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-37  Score=264.28  Aligned_cols=254  Identities=18%  Similarity=0.167  Sum_probs=195.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..     .. ....+..+. ...++.++.+|++|.+.+.+++++ 
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~-~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~   85 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS-----SD-TRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA   85 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS-----SC-CCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCc-----cc-cccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc
Confidence            5789999999999999999999999999999999861     10 111122211 124789999999999999999985 


Q ss_pred             -CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV-KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                       +|+|||+|+....  ...++ ...+++|+.++.++++++++.+ + ++||++||.++|+..  ...+++|+++.     
T Consensus        86 ~~d~Vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g~~--~~~~~~E~~~~-----  156 (335)
T 1rpn_A           86 QPQEVYNLAAQSFVGASWNQP-VTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFGLI--QAERQDENTPF-----  156 (335)
T ss_dssp             CCSEEEECCSCCCHHHHTTSH-HHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGCSC--SSSSBCTTSCC-----
T ss_pred             CCCEEEECccccchhhhhhCh-HHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhCCC--CCCCCCcccCC-----
Confidence             6999999997653  13445 4889999999999999999987 6 899999999877544  23467787764     


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccHHHHH-HHHhcCccc--cc-cccCcce
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSL-ALILGNREE--YG-FLLNTSM  233 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~-~~~~~~~~~--~~-~~~~~~~  233 (285)
                          .|.+.|+.+|.++|.+++.++++++++++++||+++|||+..... ...+..+. ....+....  +. .+..++|
T Consensus       157 ----~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~  232 (335)
T 1rpn_A          157 ----YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDW  232 (335)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEEC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceece
Confidence                356789999999999999998888999999999999999754322 11122222 233343322  22 2567899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|++|+|++++.+++++. .++||+++ +.+|+.|+++.+.+.+|.
T Consensus       233 i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~  277 (335)
T 1rpn_A          233 GFAGDYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGL  277 (335)
T ss_dssp             EEHHHHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTC
T ss_pred             EEHHHHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCC
Confidence            999999999999998765 47888754 689999999999999886

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=100.00  E-value=8.2e-37  Score=261.13  Aligned_cols=265  Identities=27%  Similarity=0.355  Sum_probs=197.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC--CCCCCEEEE-ecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIF-HADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~Dl~d~~~~~~~~   80 (285)
                      ++|+|||||||||||++++++|+++|++|++++|+.        +....+....  ....+++++ .+|++|.+.+.+++
T Consensus        10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~   81 (342)
T 1y1p_A           10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA--------SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc--------ccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHH
Confidence            457999999999999999999999999999999976        2222221100  001378888 89999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHh-cCCccEEEEeccceeeeccCC--CCcccccCCCCchhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK-SGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDY  157 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~  157 (285)
                      +++|+|||+|+..... .++ ...+++|+.++.++++++++ .+ +++||++||.++++....  ...+++|+++.....
T Consensus        82 ~~~d~vih~A~~~~~~-~~~-~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~  158 (342)
T 1y1p_A           82 KGAAGVAHIASVVSFS-NKY-DEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESI  158 (342)
T ss_dssp             TTCSEEEECCCCCSCC-SCH-HHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHH
T ss_pred             cCCCEEEEeCCCCCCC-CCH-HHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhh
Confidence            9999999999987653 345 48999999999999999985 45 899999999988754322  125788887643221


Q ss_pred             hh-------hcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCc-cHHHHHHH-HhcCccccc
Q 023244          158 IR-------KLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAG-SVRSSLAL-ILGNREEYG  226 (285)
Q Consensus       158 ~~-------~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~-~~~~~~~~-~~~~~~~~~  226 (285)
                      ..       .+..+.+.|+.||.++|.+++.+++++  +++++++||+++|||........ .+..+... ..+....+.
T Consensus       159 ~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (342)
T 1y1p_A          159 DKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPAL  238 (342)
T ss_dssp             HHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHH
T ss_pred             hhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCcccc
Confidence            10       011234689999999999999998775  78999999999999976543222 33333333 333332222


Q ss_pred             c-ccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEeccccCHHHHHHHHHhhCCCC
Q 023244          227 F-LLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       227 ~-~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~~~s~~e~~~~i~~~~~~~  279 (285)
                      . ...++|+|++|+|++++.+++++...| .++++++.+|+.|+++.+.+.+|..
T Consensus       239 ~~~~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~  293 (342)
T 1y1p_A          239 ALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSK  293 (342)
T ss_dssp             HTCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTS
T ss_pred             ccCCcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCc
Confidence            2 256799999999999999998765445 4556677899999999999999863

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=100.00  E-value=3.9e-37  Score=266.71  Aligned_cols=253  Identities=19%  Similarity=0.186  Sum_probs=189.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+|||||||||||++|+++|+++| ++|++++|+..       .....+.    ...+++++.+|++|++.+.+++++
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-------~~~~~l~----~~~~v~~~~~Dl~d~~~l~~~~~~   99 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLS-------AEKINVP----DHPAVRFSETSITDDALLASLQDE   99 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTT-------CCGGGSC----CCTTEEEECSCTTCHHHHHHCCSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCC-------Cchhhcc----CCCceEEEECCCCCHHHHHHHhhC
Confidence            45789999999999999999999999 99999999761       1111111    134789999999999999999999


Q ss_pred             CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc--cCCCCchhh
Q 023244           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD--ETFWSDVDY  157 (285)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~--e~~~~~~~~  157 (285)
                      +|+|||+|+.....  ..++ ...+++|+.++.+++++|++. + +++|||+||.++|+..  ...+++  |+++..   
T Consensus       100 ~d~Vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg~~--~~~~~~~~E~~~~~---  172 (377)
T 2q1s_A          100 YDYVFHLATYHGNQSSIHDP-LADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIAEK--TFDDAKATEETDIV---  172 (377)
T ss_dssp             CSEEEECCCCSCHHHHHHCH-HHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC----------------CCCCCC---
T ss_pred             CCEEEECCCccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcCCC--CCCCcCcccccccc---
Confidence            99999999976531  1234 488999999999999999988 7 8999999999887543  233566  665210   


Q ss_pred             hhhcC-CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCC---------CCC--CCccHHHHHHH-HhcCccc
Q 023244          158 IRKLD-SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI---------CPK--FAGSVRSSLAL-ILGNREE  224 (285)
Q Consensus       158 ~~~~~-~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~---------~~~--~~~~~~~~~~~-~~~~~~~  224 (285)
                         +. .+.++|+.+|.++|.+++.++++++++++++||+++|||..         ...  ....+..+... ..+....
T Consensus       173 ---~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~  249 (377)
T 2q1s_A          173 ---SLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLP  249 (377)
T ss_dssp             ---CSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCC
T ss_pred             ---cccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeE
Confidence               01 34578999999999999999888899999999999999976         210  02334444333 3344333


Q ss_pred             cc--cccCcceeeHHHHHHH-HHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          225 YG--FLLNTSMVHVDDVARA-HIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       225 ~~--~~~~~~~i~~~D~a~~-~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +.  .+..++|+|++|+|++ ++.+++++.. |+||+++ +.+|+.|+++.+.+.+|.
T Consensus       250 ~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~~-g~~~i~~~~~~s~~e~~~~i~~~~g~  306 (377)
T 2q1s_A          250 LENGGVATRDFIFVEDVANGLIACAADGTPG-GVYNIASGKETSIADLATKINEITGN  306 (377)
T ss_dssp             CSGGGCCEECCEEHHHHHHHHHHHHHHCCTT-EEEECCCCCCEEHHHHHHHHHHHHTC
T ss_pred             EeCCCCeEEeeEEHHHHHHHHHHHHHhcCCC-CeEEecCCCceeHHHHHHHHHHHhCC
Confidence            22  2567899999999999 9999988664 4888765 689999999999998875

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=100.00  E-value=3.7e-37  Score=260.12  Aligned_cols=246  Identities=26%  Similarity=0.284  Sum_probs=190.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+|||||||||||++++++|+++|++|++++|...       .....   +.   .++.++.+|++|++.+.++++  ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~-------~~~~~---~~---~~~~~~~~Dl~~~~~~~~~~~~~~~   67 (311)
T 2p5y_A            1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLAT-------GKREN---VP---KGVPFFRVDLRDKEGVERAFREFRP   67 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSS-------CCGGG---SC---TTCCEECCCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCc-------Cchhh---cc---cCeEEEECCCCCHHHHHHHHHhcCC
Confidence            47999999999999999999999999999998541       11111   11   256788999999999999998  79


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc-eeeeccCCCCcccccCCCCchhhhhh
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN-AAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~-~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      |+|||+|+....  ...++ ...+++|+.++.++++++++.+ +++||++||. ++|+.. ....+++|+++.       
T Consensus        68 d~vi~~a~~~~~~~~~~~~-~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~-~~~~~~~E~~~~-------  137 (311)
T 2p5y_A           68 THVSHQAAQASVKVSVEDP-VLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEV-PEGERAEETWPP-------  137 (311)
T ss_dssp             SEEEECCSCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCC-CTTCCBCTTSCC-------
T ss_pred             CEEEECccccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCC-CCCCCcCCCCCC-------
Confidence            999999997543  12344 4789999999999999999888 8999999998 655431 223466777653       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccHHHHHHH-HhcCccccc-------cccCc
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSLAL-ILGNREEYG-------FLLNT  231 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~~-~~~~~~~~~-------~~~~~  231 (285)
                        .+.++|+.||.++|.+++.++++++++++++||+++|||+..... ...+..+... ..+....+.       ....+
T Consensus       138 --~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  215 (311)
T 2p5y_A          138 --RPKSPYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVR  215 (311)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEE
T ss_pred             --CCCChHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEE
Confidence              345789999999999999998888999999999999999765432 2233333332 233332221       24568


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|+|++++.+++++  +++||+++ +.+|+.|+++.+.+.+|.
T Consensus       216 ~~i~v~Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~  261 (311)
T 2p5y_A          216 DYVYVGDVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGK  261 (311)
T ss_dssp             CEEEHHHHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             eeEEHHHHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCC
Confidence            9999999999999999864  66898764 689999999999998875

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.2e-37  Score=248.28  Aligned_cols=224  Identities=23%  Similarity=0.254  Sum_probs=170.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+. ||+|||||||||||++++++|+++|++|++++|++        +...      ....+++++.+|++|.+++.+++
T Consensus         1 M~~-m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~------~~~~~~~~~~~Dl~d~~~~~~~~   65 (227)
T 3dhn_A            1 MEK-VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP--------EKIK------IENEHLKVKKADVSSLDEVCEVC   65 (227)
T ss_dssp             --C-CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG--------GGCC------CCCTTEEEECCCTTCHHHHHHHH
T ss_pred             CCC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc--------ccch------hccCceEEEEecCCCHHHHHHHh
Confidence            653 67999999999999999999999999999999987        1111      11248999999999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +++|+|||+|+....   +  ...+++|+.++.++++++++.+ +++||++||.++++..+.   ...|+.+        
T Consensus        66 ~~~d~vi~~a~~~~~---~--~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~~---~~~~~~~--------  128 (227)
T 3dhn_A           66 KGADAVISAFNPGWN---N--PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAPG---LRLMDSG--------  128 (227)
T ss_dssp             TTCSEEEECCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEETT---EEGGGTT--------
T ss_pred             cCCCEEEEeCcCCCC---C--hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCCC---CccccCC--------
Confidence            999999999986522   1  2478889999999999999998 899999999987765432   1222222        


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       ..|.+.|+.+|.++|.+++.++++.+++++++||+.+|||+.......         .+....+.....++|+|++|+|
T Consensus       129 -~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~Dva  198 (227)
T 3dhn_A          129 -EVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------LGKDDMIVDIVGNSHISVEDYA  198 (227)
T ss_dssp             -CSCGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------EESSBCCCCTTSCCEEEHHHHH
T ss_pred             -cchHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------ecCCCcccCCCCCcEEeHHHHH
Confidence             135678999999999999888877899999999999999976432111         1222222223348999999999


Q ss_pred             HHHHHhhcCCCCCc-eEEEe-ccccCHH
Q 023244          241 RAHIFLLEYPDAKG-RYICS-SHTLTIQ  266 (285)
Q Consensus       241 ~~~~~~~~~~~~~~-~~~~~-~~~~s~~  266 (285)
                      ++++.+++++...| +|+++ +++.++.
T Consensus       199 ~ai~~~l~~~~~~g~~~~~~~~~~~~~~  226 (227)
T 3dhn_A          199 AAMIDELEHPKHHQERFTIGYLEHHHHH  226 (227)
T ss_dssp             HHHHHHHHSCCCCSEEEEEECCSCCC--
T ss_pred             HHHHHHHhCccccCcEEEEEeehhcccC
Confidence            99999999987655 68754 5677765

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=100.00  E-value=1e-36  Score=262.61  Aligned_cols=253  Identities=18%  Similarity=0.196  Sum_probs=192.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      |+|||||||||||++|+++|++. |++|++++|+..     . .....+.++. ...++.++.+|++|.+.+.++++  +
T Consensus         1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~-----~-~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   73 (361)
T 1kew_A            1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTY-----A-GNLESLSDIS-ESNRYNFEHADICDSAEITRIFEQYQ   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCT-----T-CCGGGGTTTT-TCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCC-----C-Cchhhhhhhh-cCCCeEEEECCCCCHHHHHHHHhhcC
Confidence            47999999999999999999998 799999998651     0 1111222221 13478999999999999999998  8


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhc--CCcc-------EEEEeccceeeeccCCCCc------
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKS--GTVK-------RVVYTSSNAAVFYNDKDVD------  145 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-------~~v~~SS~~~~~~~~~~~~------  145 (285)
                      +|+|||+|+....  ...++ +.++++|+.++.++++++.+.  + ++       +|||+||.++|+.......      
T Consensus        74 ~d~vih~A~~~~~~~~~~~~-~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~  151 (361)
T 1kew_A           74 PDAVMHLAAESHVDRSITGP-AAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVT  151 (361)
T ss_dssp             CSEEEECCSCCCHHHHHHCT-HHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSC
T ss_pred             CCEEEECCCCcChhhhhhCH-HHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCccccccccccc
Confidence            9999999997653  12233 488999999999999999988  7 66       9999999987754321111      


Q ss_pred             --ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCc
Q 023244          146 --MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNR  222 (285)
Q Consensus       146 --~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~  222 (285)
                        +++|+++.         .+.+.|+.+|.++|.+++.++++++++++++||+.||||+....  ..+..+.. ...+..
T Consensus       152 ~~~~~E~~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~  220 (361)
T 1kew_A          152 LPLFTETTAY---------APSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKP  220 (361)
T ss_dssp             CCCBCTTSCC---------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCC---------CCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc--cHHHHHHHHHHcCCC
Confidence              56676643         45678999999999999999888899999999999999975421  23333332 333433


Q ss_pred             cccc--cccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          223 EEYG--FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       223 ~~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ..+.  ....++|+|++|+|++++.+++.+..+.+||+++ ..+|+.|+++.+.+.+|.
T Consensus       221 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~  279 (361)
T 1kew_A          221 LPIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDE  279 (361)
T ss_dssp             EEEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHH
T ss_pred             ceEcCCCceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCC
Confidence            3322  2456799999999999999998765566898766 579999999999987753

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=100.00  E-value=8.9e-37  Score=261.68  Aligned_cols=260  Identities=19%  Similarity=0.206  Sum_probs=193.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc--cCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+|||||||||||++++++|+++|++|++++|+......  ...+....+...  ...++.++.+|++|.+.+.++++ 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~   79 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKK   79 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--cCCceEEEECCCCCHHHHHHHHHh
Confidence            5799999999999999999999999999999986521000  011111222211  12368899999999999999998 


Q ss_pred             -CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                       ++|+|||+|+....  ...++ ..++++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++..    
T Consensus        80 ~~~d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~E~~~~~----  151 (348)
T 1ek6_A           80 YSFMAVIHFAGLKAVGESVQKP-LDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNP--QYLPLDEAHPTG----  151 (348)
T ss_dssp             CCEEEEEECCSCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSC--SSSSBCTTSCCC----
T ss_pred             cCCCEEEECCCCcCccchhhch-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCC--CCCCcCCCCCCC----
Confidence             79999999997643  12234 4889999999999999999888 8999999999876543  345778877531    


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHH-cCCcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcCccc--c--
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREE--Y--  225 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~--~--  225 (285)
                          +..+.|+.+|.++|.+++.++++ .+++++++||+++|||.....        ...++..+.....+....  +  
T Consensus       152 ----p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (348)
T 1ek6_A          152 ----GCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFG  227 (348)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEEC
T ss_pred             ----CCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeC
Confidence                22578999999999999999876 239999999999999953211        123444444444422221  1  


Q ss_pred             ------ccccCcceeeHHHHHHHHHHhhcCC--CCC-ceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          226 ------GFLLNTSMVHVDDVARAHIFLLEYP--DAK-GRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 ------~~~~~~~~i~~~D~a~~~~~~~~~~--~~~-~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                            ..+..++|+|++|+|++++.+++++  ..+ ++||++ ++.+|+.|+++.+.+.+|.
T Consensus       228 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~  290 (348)
T 1ek6_A          228 NDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK  290 (348)
T ss_dssp             SCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS
T ss_pred             CcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC
Confidence                  1245789999999999999999764  233 578875 4689999999999998875

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=100.00  E-value=1.9e-36  Score=264.70  Aligned_cols=266  Identities=13%  Similarity=0.121  Sum_probs=190.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc--------cC----ccchhhhhcCCCCCCCEEEEecCCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--------RN----SKDLSFLKNLPGASERLRIFHADLS   71 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~----~~~~~~~~~~~~~~~~~~~~~~Dl~   71 (285)
                      .+++|||||||||||++|+++|+++|++|++++|.......        ..    .+....+...  ...++.++.+|++
T Consensus        10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~v~~~~~Dl~   87 (404)
T 1i24_A           10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDIC   87 (404)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTT
T ss_pred             CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc--cCCceEEEECCCC
Confidence            46799999999999999999999999999999885410000        00    0000000000  1237889999999


Q ss_pred             ChhhHHHHhcC--CCEEEEecccCCC--CCCChH--HHHHHHHHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCC
Q 023244           72 HPDGFDAAIAG--CTGVLHVATPVDF--EDKEPE--EVITQRAINGTLGILKSCLKSGTV-KRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        72 d~~~~~~~~~~--~d~vih~a~~~~~--~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~  144 (285)
                      |.+.+.+++++  +|+|||+||....  ...++.  ...+++|+.++.++++++++.+ + ++||++||.++|+...   
T Consensus        88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~---  163 (404)
T 1i24_A           88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTPN---  163 (404)
T ss_dssp             SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCCS---
T ss_pred             CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCCC---
Confidence            99999999987  9999999997653  122332  2478999999999999999988 6 5999999998775432   


Q ss_pred             cccccCCCCchh-----hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-------------
Q 023244          145 DMMDETFWSDVD-----YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------------  206 (285)
Q Consensus       145 ~~~~e~~~~~~~-----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-------------  206 (285)
                      .+++|+.+....     ....+..+.++|+.||.++|.+++.+++++|++++++||++||||+....             
T Consensus       164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~  243 (404)
T 1i24_A          164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD  243 (404)
T ss_dssp             SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred             CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence            355665321100     00001245678999999999999999888899999999999999976421             


Q ss_pred             --CCccHHHHHH-HHhcCcccccc--ccCcceeeHHHHHHHHHHhhcCCCCC---ceEEEeccccCHHHHHHHHHhh
Q 023244          207 --FAGSVRSSLA-LILGNREEYGF--LLNTSMVHVDDVARAHIFLLEYPDAK---GRYICSSHTLTIQEMAEFLSAK  275 (285)
Q Consensus       207 --~~~~~~~~~~-~~~~~~~~~~~--~~~~~~i~~~D~a~~~~~~~~~~~~~---~~~~~~~~~~s~~e~~~~i~~~  275 (285)
                        ....+..+.. ...+....+..  ...++|+|++|+|++++.+++++...   .+||++++.+|+.|+++.+.+.
T Consensus       244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~  320 (404)
T 1i24_A          244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKA  320 (404)
T ss_dssp             TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHH
Confidence              0223443333 33444432322  45789999999999999999876543   3799877889999999999987

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=100.00  E-value=1.2e-36  Score=257.72  Aligned_cols=244  Identities=19%  Similarity=0.230  Sum_probs=191.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            7 RVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      +|||||||||||++|+++|+++  |++|++++|+..        ..          .++.++.+|++|.+++.++++  +
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~--------~~----------~~~~~~~~D~~d~~~~~~~~~~~~   62 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQR--------DT----------GGIKFITLDVSNRDEIDRAVEKYS   62 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCC--------CC----------TTCCEEECCTTCHHHHHHHHHHTT
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCc--------cc----------cCceEEEecCCCHHHHHHHHhhcC
Confidence            5899999999999999999998  899999998761        10          045678999999999999998  7


Q ss_pred             CCEEEEecccCCCC-CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           83 CTGVLHVATPVDFE-DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        83 ~d~vih~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      +|+|||+|+..... ..++ ...+++|+.++.++++++++.+ +++||++||..+|+... ...+.+|+++.        
T Consensus        63 ~d~vih~a~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~~~--------  131 (317)
T 3ajr_A           63 IDAIFHLAGILSAKGEKDP-ALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPET-PKNKVPSITIT--------  131 (317)
T ss_dssp             CCEEEECCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTS-CSSSBCSSSCC--------
T ss_pred             CcEEEECCcccCCccccCh-HHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCC-CCCCccccccC--------
Confidence            99999999975431 1233 4789999999999999999988 89999999999875432 23355666542        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC---CccHHHHHHHHhcCcccc--ccccCcceeeH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF---AGSVRSSLALILGNREEY--GFLLNTSMVHV  236 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~  236 (285)
                       .|.+.|+.+|.++|.+++.++++++++++++||+.+||+...+..   ......+.....+.....  ..+..++|+|+
T Consensus       132 -~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  210 (317)
T 3ajr_A          132 -RPRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYM  210 (317)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEH
Confidence             356789999999999999988888999999999999998643221   112333334444443222  23567899999


Q ss_pred             HHHHHHHHHhhcCCCC----CceEEEeccccCHHHHHHHHHhhCCCCC
Q 023244          237 DDVARAHIFLLEYPDA----KGRYICSSHTLTIQEMAEFLSAKYPEYP  280 (285)
Q Consensus       237 ~D~a~~~~~~~~~~~~----~~~~~~~~~~~s~~e~~~~i~~~~~~~~  280 (285)
                      +|+|++++.+++++..    +++||++++.+|+.|+++.+.+.+|..+
T Consensus       211 ~Dva~a~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~  258 (317)
T 3ajr_A          211 PDALKALVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFE  258 (317)
T ss_dssp             HHHHHHHHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCC
T ss_pred             HHHHHHHHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccc
Confidence            9999999999987643    3689988788999999999999988533

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-37  Score=262.26  Aligned_cols=256  Identities=18%  Similarity=0.220  Sum_probs=188.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      ||+|||||||||||++|+++|+++|++|++++|....   ........+..    ..++.++.+|++|.+.+.+++++  
T Consensus         1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~   73 (347)
T 1orr_A            1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK---GATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYM   73 (347)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCST---THHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHC
T ss_pred             CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCcc---Cchhhhhhhcc----CCceEEEEcCCCCHHHHHHHHhccC
Confidence            3689999999999999999999999999999985310   00011122222    13688999999999999999988  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCC--------------c
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDV--------------D  145 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~--------------~  145 (285)
                      +|+|||+|+....  ...++ ...+++|+.++.++++++++.+ ++ +|||+||.++|+......              .
T Consensus        74 ~d~vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~  151 (347)
T 1orr_A           74 PDSCFHLAGQVAMTTSIDNP-CMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPN  151 (347)
T ss_dssp             CSEEEECCCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTT
T ss_pred             CCEEEECCcccChhhhhhCH-HHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCCCCcCCccccccccccccccc
Confidence            9999999997553  12234 4789999999999999999988 65 999999998775432110              1


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC-ccHHHHH-HHHhcC--
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA-GSVRSSL-ALILGN--  221 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~-~~~~~~~-~~~~~~--  221 (285)
                      +++|+++.         .+.+.|+.+|.++|.+++.++.++|++++++||++||||+...... ..+..+. ....+.  
T Consensus       152 ~~~e~~~~---------~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
T 1orr_A          152 GYDESTQL---------DFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNG  222 (347)
T ss_dssp             CBCTTSCC---------CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTT
T ss_pred             CccccCCC---------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCccc
Confidence            13343332         3567899999999999999988889999999999999997643221 2233222 222222  


Q ss_pred             ---ccccc--cccCcceeeHHHHHHHHHHhhcCC-C-CCceEEEecc---ccCHHHHHHHHHhhCCC
Q 023244          222 ---REEYG--FLLNTSMVHVDDVARAHIFLLEYP-D-AKGRYICSSH---TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       222 ---~~~~~--~~~~~~~i~~~D~a~~~~~~~~~~-~-~~~~~~~~~~---~~s~~e~~~~i~~~~~~  278 (285)
                         +....  .+..++|+|++|+|++++.++++. . .+.+||++++   .+|+.|+++.+.+.+|.
T Consensus       223 ~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~  289 (347)
T 1orr_A          223 INKPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI  289 (347)
T ss_dssp             CCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred             CCCCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCC
Confidence               22111  255789999999999999999852 2 3447888764   49999999999998875

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=100.00  E-value=1.9e-36  Score=264.11  Aligned_cols=263  Identities=21%  Similarity=0.221  Sum_probs=193.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHH-HcCCeEEEEecCCCCccc-cCccchhhh----hcCCCC--CCC---EEEEecCCCCh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLL-DHGYSVTTTVRSELDPEH-RNSKDLSFL----KNLPGA--SER---LRIFHADLSHP   73 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~-~~~~~~~~~----~~~~~~--~~~---~~~~~~Dl~d~   73 (285)
                      +|+|||||||||||++|+++|+ ++|++|++++|+...... ...+....+    ......  ..+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4689999999999999999999 999999999997621000 000001111    122110  124   88999999999


Q ss_pred             hhHHHHhc--C-CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC-----C
Q 023244           74 DGFDAAIA--G-CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK-----D  143 (285)
Q Consensus        74 ~~~~~~~~--~-~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~-----~  143 (285)
                      +.+.++++  + +|+|||+|+.....  ..++ ..++++|+.++.++++++++.+ +++|||+||.++|+....     .
T Consensus        82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~-~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~  159 (397)
T 1gy8_A           82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDP-LKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN  159 (397)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHHHHHHHhcCCCCEEEECCCccCcCcchhhH-HHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCccccccc
Confidence            99999997  6 99999999976531  2234 4889999999999999999888 899999999987654321     1


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC-------CCccHHHHH-
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK-------FAGSVRSSL-  215 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~~~-  215 (285)
                      ..+++|+++.         .|.+.|+.+|.++|.+++.++.+++++++++||++||||.....       ...++..+. 
T Consensus       160 ~~~~~E~~~~---------~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~  230 (397)
T 1gy8_A          160 AEPIDINAKK---------SPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (397)
T ss_dssp             CCCBCTTSCC---------BCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccCcCccCCC---------CCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHH
Confidence            4567787753         34678999999999999999988899999999999999974321       123344333 


Q ss_pred             ----HHHhcCc------------ccc--------ccccCcceeeHHHHHHHHHHhhcCCC-C-----C---ceEEEe-cc
Q 023244          216 ----ALILGNR------------EEY--------GFLLNTSMVHVDDVARAHIFLLEYPD-A-----K---GRYICS-SH  261 (285)
Q Consensus       216 ----~~~~~~~------------~~~--------~~~~~~~~i~~~D~a~~~~~~~~~~~-~-----~---~~~~~~-~~  261 (285)
                          ....+..            ..+        ..+..++|||++|+|++++.+++++. .     .   ++||++ ++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~  310 (397)
T 1gy8_A          231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR  310 (397)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC
T ss_pred             HHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCC
Confidence                2222321            111        12457899999999999999997532 1     2   679875 46


Q ss_pred             ccCHHHHHHHHHhhCCC
Q 023244          262 TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       262 ~~s~~e~~~~i~~~~~~  278 (285)
                      .+|+.|+++.+.+.+|.
T Consensus       311 ~~s~~e~~~~i~~~~g~  327 (397)
T 1gy8_A          311 GYSVREVIEVARKTTGH  327 (397)
T ss_dssp             CEEHHHHHHHHHHHHCC
T ss_pred             cccHHHHHHHHHHHhCC
Confidence            89999999999998875

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=100.00  E-value=2.5e-36  Score=258.50  Aligned_cols=254  Identities=20%  Similarity=0.265  Sum_probs=191.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~   83 (285)
                      |+|||||||||||++++++|+++ |++|++++|+.        .....+..    ..+++++.+|++|. +.+.++++++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~--------~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS--------DAISRFLN----HPHFHFVEGDISIHSEWIEYHVKKC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC--------GGGGGGTT----CTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCc--------chHHHhhc----CCCeEEEeccccCcHHHHHhhccCC
Confidence            58999999999999999999998 89999999987        22222211    24789999999985 5688888899


Q ss_pred             CEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+.....  ..++ ..++++|+.++.++++++++.+  ++|||+||.++|+..  ...+++|+++...  ..+.
T Consensus        69 d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g~~--~~~~~~e~~~~~~--~~~~  141 (345)
T 2bll_A           69 DVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMC--SDKYFDEDHSNLI--VGPV  141 (345)
T ss_dssp             SEEEECBCCCCHHHHHHSH-HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTC--CCSSBCTTTCCCB--CCCT
T ss_pred             CEEEEcccccCccchhcCH-HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcCCC--CCCCcCCcccccc--cCcc
Confidence            9999999975531  1234 4788999999999999999887  899999999877543  2345677764310  0111


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC------CCccHHHHH-HHHhcCccccc--cccCcc
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSL-ALILGNREEYG--FLLNTS  232 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~------~~~~~~~~~-~~~~~~~~~~~--~~~~~~  232 (285)
                      ..+.+.|+.+|.++|.+++.++++.+++++++||+++|||+....      ....+..+. ....+....+.  .+..++
T Consensus       142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  221 (345)
T 2bll_A          142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (345)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEE
Confidence            234568999999999999999888899999999999999975431      112233333 33444443332  246789


Q ss_pred             eeeHHHHHHHHHHhhcCCC---CCceEEEecc--ccCHHHHHHHHHhhCCC
Q 023244          233 MVHVDDVARAHIFLLEYPD---AKGRYICSSH--TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~--~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++|+|++++.+++++.   .+++||++++  .+|+.|+++.+.+.+|.
T Consensus       222 ~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~  272 (345)
T 2bll_A          222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK  272 (345)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHT
T ss_pred             EEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCC
Confidence            9999999999999998763   3457887763  79999999999997764

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=100.00  E-value=6.9e-37  Score=255.59  Aligned_cols=222  Identities=17%  Similarity=0.102  Sum_probs=183.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+|||||||||||++++++|+++|++|++++|..                            +|++|.+.+.++++  ++
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------~D~~d~~~~~~~~~~~~~   57 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL----------------------------LDITNISQVQQVVQEIRP   57 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT----------------------------SCTTCHHHHHHHHHHHCC
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc----------------------------cCCCCHHHHHHHHHhcCC
Confidence            4899999999999999999999999999999954                            89999999999998  69


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++ ...+++|+.++.++++++++.+ + +|||+||.++|+..  ...+++|+++.        
T Consensus        58 d~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~~~--~~~~~~E~~~~--------  124 (287)
T 3sc6_A           58 HIIIHCAAYTKVDQAEKER-DLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQGD--RPEGYDEFHNP--------  124 (287)
T ss_dssp             SEEEECCCCCCHHHHTTCH-HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCCC--CSSCBCTTSCC--------
T ss_pred             CEEEECCcccChHHHhcCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcCCC--CCCCCCCCCCC--------
Confidence            999999998764  22455 4899999999999999999998 5 79999999887544  34678888764        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHh-cCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       .|.+.|+.+|.++|.+++.++    .+++++||+.+|||+..    ..+..+..... +.......+..++|+|++|+|
T Consensus       125 -~p~~~Y~~sK~~~E~~~~~~~----~~~~ilR~~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  195 (287)
T 3sc6_A          125 -APINIYGASKYAGEQFVKELH----NKYFIVRTSWLYGKYGN----NFVKTMIRLGKEREEISVVADQIGSPTYVADLN  195 (287)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHTTCSEEEEECSCEECCEEHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHhC----CCcEEEeeeeecCCCCC----cHHHHHHHHHHcCCCeEeecCcccCceEHHHHH
Confidence             456789999999999997754    47899999999998743    24444444433 333333346788999999999


Q ss_pred             HHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ++++.+++++. +++||+++ +.+|+.|+++.+++.+|.
T Consensus       196 ~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  233 (287)
T 3sc6_A          196 VMINKLIHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANM  233 (287)
T ss_dssp             HHHHHHHTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCC
Confidence            99999999877 77898655 679999999999998875

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=100.00  E-value=4.1e-37  Score=256.86  Aligned_cols=226  Identities=17%  Similarity=0.133  Sum_probs=179.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-C   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~   83 (285)
                      +|+||||| +||||++|+++|+++|++|++++|+..        .         ...+++++.+|++|.+.+.+++++ +
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~--------~---------~~~~~~~~~~Dl~d~~~~~~~~~~~~   64 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQ--------P---------MPAGVQTLIADVTRPDTLASIVHLRP   64 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTS--------C---------CCTTCCEEECCTTCGGGCTTGGGGCC
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcc--------c---------cccCCceEEccCCChHHHHHhhcCCC
Confidence            57899999 599999999999999999999999871        1         124788999999999999999987 9


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+|+....   ++ ..++++|+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++.         .
T Consensus        65 d~vih~a~~~~~---~~-~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~---------~  128 (286)
T 3gpi_A           65 EILVYCVAASEY---SD-EHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYGQE--VEEWLDEDTPP---------I  128 (286)
T ss_dssp             SEEEECHHHHHH---C------CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCCCC--CSSEECTTSCC---------C
T ss_pred             CEEEEeCCCCCC---CH-HHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEcCC--CCCCCCCCCCC---------C
Confidence            999999997442   23 4778899999999999999888 8999999999887544  44577888764         3


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAH  243 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~  243 (285)
                      |.+.|+.+|.++|.+ +.+     ++++++||+++|||+...        +...+.........+..++|+|++|+|+++
T Consensus       129 p~~~Y~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  194 (286)
T 3gpi_A          129 AKDFSGKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRLR--------MIRQAQTPEQWPARNAWTNRIHRDDGAAFI  194 (286)
T ss_dssp             CCSHHHHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBCH--------HHHHTTCGGGSCSSBCEECEEEHHHHHHHH
T ss_pred             CCChhhHHHHHHHHH-Hhc-----CCeEEEecccccCCCchh--------HHHHHHhcccCCCcCceeEEEEHHHHHHHH
Confidence            567899999999998 542     999999999999997531        112222211111225678999999999999


Q ss_pred             HHhhcC---CCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          244 IFLLEY---PDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       244 ~~~~~~---~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +.++++   ...+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~  233 (286)
T 3gpi_A          195 AYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGI  233 (286)
T ss_dssp             HHHHHHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHhhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCC
Confidence            999988   45567898765 689999999999999986

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=100.00  E-value=9.4e-37  Score=257.96  Aligned_cols=243  Identities=18%  Similarity=0.136  Sum_probs=186.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+|||||||||||++|+++|+++|+      +..        ..          ...++++.+|++|.+.+.+++++ 
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~--------~~----------~~~~~~~~~D~~d~~~~~~~~~~~   60 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAG------LPG--------ED----------WVFVSSKDADLTDTAQTRALFEKV   60 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTC------CTT--------CE----------EEECCTTTCCTTSHHHHHHHHHHS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCC------ccc--------cc----------ccccCceecccCCHHHHHHHHhhc
Confidence            578999999999999999999999998      211        00          01233457999999999999987 


Q ss_pred             -CCEEEEecccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           83 -CTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        83 -~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                       +|+|||+|+....   ...++ ...+++|+.++.+++++|++.+ +++|||+||.++|+..  ...+++|+++...   
T Consensus        61 ~~d~Vih~A~~~~~~~~~~~~~-~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~~---  133 (319)
T 4b8w_A           61 QPTHVIHLAAMVGGLFRNIKYN-LDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFPDK--TTYPIDETMIHNG---  133 (319)
T ss_dssp             CCSEEEECCCCCCCHHHHTTCH-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSCSS--CCSSBCGGGGGBS---
T ss_pred             CCCEEEECceecccccccccCH-HHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcCCC--CCCCccccccccC---
Confidence             9999999998652   23455 4889999999999999999998 9999999999877543  4557777763210   


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHH-----HhcCccccc--ccc
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLAL-----ILGNREEYG--FLL  229 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~-----~~~~~~~~~--~~~  229 (285)
                       ++.+...+|+.+|.++|.+++.++++.+++++++||+++|||+....  ....+..+...     ..+....+.  .+.
T Consensus       134 -~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  212 (319)
T 4b8w_A          134 -PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNP  212 (319)
T ss_dssp             -CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCC
T ss_pred             -CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCe
Confidence             11222236999999999999999988899999999999999986532  12233333332     344443332  256


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCC--CceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDA--KGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+|++++.+++++..  +++||++ ++.+|+.|+++.+.+.+|.
T Consensus       213 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  264 (319)
T 4b8w_A          213 RRQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDF  264 (319)
T ss_dssp             EECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTC
T ss_pred             eEEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCC
Confidence            78999999999999999987443  3478865 5799999999999999985

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=100.00  E-value=2.1e-35  Score=251.48  Aligned_cols=242  Identities=20%  Similarity=0.212  Sum_probs=185.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+|||||||||||++|+++|+++|++|++++|+..       ........+    .++.++.+|++|.+++.++++  
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~   87 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT-------GKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF   87 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS-------SCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc-------cchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc
Confidence            4689999999999999999999999999999999651       111111111    378999999999999999998  


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+|||+||.......... . +++|+.++.++++++.+.+ +++||++||.++|+.......+++|++          
T Consensus        88 ~~D~vih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~----------  154 (330)
T 2pzm_A           88 KPTHVVHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT----------  154 (330)
T ss_dssp             CCSEEEECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC----------
T ss_pred             CCCEEEECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC----------
Confidence            89999999998665211222 3 8999999999999999888 899999999987644321112566665          


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc-ccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF-LLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~D~a  240 (285)
                       .+.+.|+.+|.++|.+++.+    +++++++||+++|||+..   ...+..+..........+.. . .++|+|++|+|
T Consensus       155 -~~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva  225 (330)
T 2pzm_A          155 -APFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA---IGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFL  225 (330)
T ss_dssp             -CCCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC---SSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHH
T ss_pred             -CCCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC---CCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHH
Confidence             13468999999999998764    899999999999999852   22333333332222222221 3 67999999999


Q ss_pred             H-HHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          241 R-AHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       241 ~-~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      + +++.+++++. +++||+++ ..+|+.|+++.+.+.+|..
T Consensus       226 ~~a~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~  265 (330)
T 2pzm_A          226 AIADLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT  265 (330)
T ss_dssp             HHHHHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence            9 9999998765 66888765 6899999999999988764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=100.00  E-value=1.2e-36  Score=257.89  Aligned_cols=242  Identities=22%  Similarity=0.154  Sum_probs=182.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+....    ......+.... ...+++++.+|++          ++
T Consensus         6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~-~~~~~~~~~~Dl~----------~~   70 (321)
T 3vps_A            6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPP----MIPPEGTGKFL-EKPVLELEERDLS----------DV   70 (321)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCC----SSCCTTSSEEE-CSCGGGCCHHHHT----------TE
T ss_pred             CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccc----ccchhhhhhhc-cCCCeeEEeCccc----------cC
Confidence            468999999999999999999999999999999976100    00111111100 1124555556655          79


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++. ..++ |+.++.++++++++.+ +++|||+||.++|+..  ...+++|+++.        
T Consensus        71 d~vi~~a~~~~~~~~~~~~~-~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~~~--~~~~~~E~~~~--------  137 (321)
T 3vps_A           71 RLVYHLASHKSVPRSFKQPL-DYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYGQA--DTLPTPEDSPL--------  137 (321)
T ss_dssp             EEEEECCCCCCHHHHTTSTT-TTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--SSSSBCTTSCC--------
T ss_pred             CEEEECCccCChHHHHhCHH-HHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhCCC--CCCCCCCCCCC--------
Confidence            999999998663  223443 5666 9999999999999999 9999999999987554  44577888764        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCC-cEEEeccCceecCCCCCCCCccHHHHHH-HHhcCccccc--cccCcceeeHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYG--FLLNTSMVHVD  237 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i-~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i~~~  237 (285)
                       .|.+.|+.+|.++|.+++.++++.++ +++++||+++|||+...  ...+..+.. ...+....+.  .+..++|+|++
T Consensus       138 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          138 -SPRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP--DALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT--TSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             -CCCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC--CChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence             35678999999999999999988899 99999999999997654  223433333 3333333332  25678999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++++.+++++..+ +||++ ++.+|+.|+++.+. .+|.
T Consensus       215 Dva~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~  254 (321)
T 3vps_A          215 DVVDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSP  254 (321)
T ss_dssp             HHHHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCT
T ss_pred             HHHHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCC
Confidence            9999999999988775 99876 56899999999999 8875

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=100.00  E-value=2.3e-36  Score=256.30  Aligned_cols=239  Identities=18%  Similarity=0.165  Sum_probs=186.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      +|+|||||||||||++|+++|+++|++|+++.|+.                           .+|++|.+.+.++++  +
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------~~D~~d~~~~~~~~~~~~   55 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASER   55 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------cCCccCHHHHHHHHHhcC
Confidence            57999999999999999999999999999887754                           279999999999998  8


Q ss_pred             CCEEEEecccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           83 CTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 ~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      +|+|||+|+....   ...++ ...+++|+.++.++++++++.+ +++|||+||..+|+..  ...+++|+++...    
T Consensus        56 ~d~vih~a~~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg~~--~~~~~~E~~~~~~----  127 (321)
T 1e6u_A           56 IDQVYLAAAKVGGIVANNTYP-ADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKL--AKQPMAESELLQG----  127 (321)
T ss_dssp             CSEEEECCCCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTT--CCSSBCGGGTTSS----
T ss_pred             CCEEEEcCeecCCcchhhhCH-HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcCCC--CCCCcCccccccC----
Confidence            9999999997652   12234 4789999999999999999988 8999999999887543  3456777764210    


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHHHh-----c-Cccccc--ccc
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALIL-----G-NREEYG--FLL  229 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~~-----~-~~~~~~--~~~  229 (285)
                      +..+..+.|+.+|.++|.+++.++++++++++++||+++|||+....  ....+..+.....     + ....+.  .+.
T Consensus       128 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~  207 (321)
T 1e6u_A          128 TLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTP  207 (321)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCE
Confidence            01111358999999999999999888899999999999999976432  1133333333221     2 222222  256


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCC---------CceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDA---------KGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~---------~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+|++++.+++++..         +++||++ ++.+|+.|+++.+.+.+|.
T Consensus       208 ~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~  266 (321)
T 1e6u_A          208 MREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY  266 (321)
T ss_dssp             EECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             EEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCC
Confidence            78999999999999999987654         4689875 5689999999999998875

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=7.3e-36  Score=258.57  Aligned_cols=257  Identities=19%  Similarity=0.170  Sum_probs=193.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +|+|||||||||||++++++|+++|++|++++|+.....   ......+.....  ...++.++.+|++|.+++.+++++
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~  100 (375)
T 1t2a_A           24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFN---TGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE  100 (375)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC---CTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccc---hhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHh
Confidence            378999999999999999999999999999999862100   011111111000  124788999999999999999885


Q ss_pred             --CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           83 --CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTV---KRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        83 --~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                        +|+|||+|+.....  ..++ ...+++|+.++.++++++++.+ +   ++|||+||.++|+..  ...+++|+++.  
T Consensus       101 ~~~d~vih~A~~~~~~~~~~~~-~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~~~--~~~~~~E~~~~--  174 (375)
T 1t2a_A          101 VKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYGKV--QEIPQKETTPF--  174 (375)
T ss_dssp             HCCSEEEECCSCCCHHHHHHSH-HHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTCSC--SSSSBCTTSCC--
T ss_pred             cCCCEEEECCCcccccccccCH-HHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhCCC--CCCCCCccCCC--
Confidence              69999999976531  2234 4789999999999999999887 6   799999999887543  24567787753  


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccHHHHH-HHHhcCccc--cc-cccC
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSL-ALILGNREE--YG-FLLN  230 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~-~~~~~~~~~--~~-~~~~  230 (285)
                             .+.+.|+.+|.++|.+++.++.+++++++++||+.+|||+..... ...+..+. ....+....  +. .+..
T Consensus       175 -------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~  247 (375)
T 1t2a_A          175 -------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAK  247 (375)
T ss_dssp             -------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCE
T ss_pred             -------CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCce
Confidence                   345789999999999999999888999999999999999754321 11122222 223343322  22 2567


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++|+|++|+|++++.+++++. .++||++ ++.+|+.|+++.+.+.+|.
T Consensus       248 ~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~  295 (375)
T 1t2a_A          248 RDWGHAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGK  295 (375)
T ss_dssp             ECCEEHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             eeeEEHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCC
Confidence            899999999999999998765 4788865 5689999999999999885

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=100.00  E-value=5e-36  Score=257.95  Aligned_cols=246  Identities=19%  Similarity=0.182  Sum_probs=190.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+|||||||||||++|+++|+++| ++|++++|+..        ... ...+.    ++. +.+|++|.+.+.++++  
T Consensus        46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~--------~~~-~~~~~----~~~-~~~d~~~~~~~~~~~~~~  111 (357)
T 2x6t_A           46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD--------GTK-FVNLV----DLN-IADYMDKEDFLIQIMAGE  111 (357)
T ss_dssp             --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSS--------GGG-GGGTT----TSC-CSEEEEHHHHHHHHHTTC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCC--------cch-hhccc----Cce-EeeecCcHHHHHHHHhhc
Confidence            4789999999999999999999999 99999999761        110 11111    122 6789999999999987  


Q ss_pred             ---CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           82 ---GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        82 ---~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                         ++|+|||+|+.......++ +..+++|+.++.++++++++.+ + +|||+||..+|+..  ...+++|+++.     
T Consensus       112 ~~~~~d~Vih~A~~~~~~~~~~-~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g~~--~~~~~~E~~~~-----  181 (357)
T 2x6t_A          112 EFGDVEAIFHEGACSSTTEWDG-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TSDFIESREYE-----  181 (357)
T ss_dssp             CCSSCCEEEECCSCCCTTCCCH-HHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGCSC--SSCCCSSGGGC-----
T ss_pred             ccCCCCEEEECCcccCCccCCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhCCC--CCCCcCCcCCC-----
Confidence               4999999999876644455 4899999999999999999988 7 99999999876443  33467777643     


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHHH-hcCccccc--ccc-Ccc
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALI-LGNREEYG--FLL-NTS  232 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~-~~~~~~~~--~~~-~~~  232 (285)
                          .|.+.|+.+|.++|.+++.++++.+++++++||++||||+....  ....+..+.... .+....+.  ... .++
T Consensus       182 ----~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (357)
T 2x6t_A          182 ----KPLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRD  257 (357)
T ss_dssp             ----CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEEC
T ss_pred             ----CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEc
Confidence                34678999999999999999877899999999999999975431  123444443333 33332222  244 679


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      |+|++|+|++++.+++++. +++||+++ +.+|+.|+++.+.+.+|..
T Consensus       258 ~i~v~Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  304 (357)
T 2x6t_A          258 FVYVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG  304 (357)
T ss_dssp             EEEHHHHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred             cEEHHHHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence            9999999999999998776 67898755 6899999999999988754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=6.5e-36  Score=252.24  Aligned_cols=244  Identities=20%  Similarity=0.197  Sum_probs=181.7

Q ss_pred             eEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC---
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG---   82 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---   82 (285)
                      +|||||||||||++|+++|+++| ++|++++|+..     . .....+..       +. +.+|++|.+.+.+++++   
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~-----~-~~~~~~~~-------~~-~~~d~~~~~~~~~~~~~~~~   66 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKD-----G-TKFVNLVD-------LN-IADYMDKEDFLIQIMAGEEF   66 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSS-----G-GGGHHHHT-------SC-CSEEEEHHHHHHHHHTTCCC
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCC-----C-chhhhcCc-------ce-eccccccHHHHHHHHhcccc
Confidence            58999999999999999999999 99999999761     1 11122222       12 67899999999999875   


Q ss_pred             --CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 --CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 --~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                        +|+|||+|+.......++ ..++++|+.++.++++++++.+ + +|||+||.++|+..  ...+++|+++.       
T Consensus        67 ~~~d~vi~~a~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~--~~~~~~E~~~~-------  134 (310)
T 1eq2_A           67 GDVEAIFHEGACSSTTEWDG-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGR--TSDFIESREYE-------  134 (310)
T ss_dssp             SSCCEEEECCSCCCTTCCCH-HHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTC--CSCBCSSGGGC-------
T ss_pred             CCCcEEEECcccccCcccCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhCCC--CCCCCCCCCCC-------
Confidence              999999999876644455 5899999999999999999998 7 99999999876443  23467777643       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHHHh-cCccccc--ccc-Cccee
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALIL-GNREEYG--FLL-NTSMV  234 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~~-~~~~~~~--~~~-~~~~i  234 (285)
                        .|.++|+.+|.++|.+++.++++.|++++++||+++|||+....  ....+..+..... +....+.  ... .++|+
T Consensus       135 --~p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i  212 (310)
T 1eq2_A          135 --KPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  212 (310)
T ss_dssp             --CCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEE
T ss_pred             --CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccE
Confidence              35678999999999999998877899999999999999975421  1234444433333 3322222  245 78999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      |++|+|++++.+++++. +++||+++ +.+|+.|+++.+.+.+|..
T Consensus       213 ~v~Dva~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~  257 (310)
T 1eq2_A          213 YVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG  257 (310)
T ss_dssp             EHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-------
T ss_pred             EHHHHHHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence            99999999999998776 77898764 6899999999999988753

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-35  Score=254.46  Aligned_cols=254  Identities=17%  Similarity=0.173  Sum_probs=190.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC----CCCCEEEEecCCCChhhHHHHh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG----ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ||+|||||||||||++++++|+++|++|++++|+..     .. ....+..+..    ...++.++.+|++|.+++.+++
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   74 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRAS-----SF-NTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRIL   74 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------------CCEEECCCCSSCHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc-----cc-chHHHHHHhhccccCCCceEEEECCCCCHHHHHHHH
Confidence            468999999999999999999999999999999761     10 0011111110    1247889999999999999998


Q ss_pred             cC--CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCc---cEEEEeccceeeeccCCCCcccccCCCC
Q 023244           81 AG--CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV---KRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        81 ~~--~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      ++  +|+|||+|+....  ...++ ...+++|+.++.++++++++.+ +   ++||++||.++|+..  ...+++|+++.
T Consensus        75 ~~~~~d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g~~--~~~~~~E~~~~  150 (372)
T 1db3_A           75 REVQPDEVYNLGAMSHVAVSFESP-EYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLV--QEIPQKETTPF  150 (372)
T ss_dssp             HHHCCSEEEECCCCCTTTTTTSCH-HHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTC--CSSSBCTTSCC
T ss_pred             HhcCCCEEEECCcccCccccccCH-HHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhCCC--CCCCCCccCCC
Confidence            75  7999999998654  23344 4888999999999999999887 6   799999999876543  23467777753


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccHHHHHH-HHhcCccc--cc-cc
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSLA-LILGNREE--YG-FL  228 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~-~~~~~~~~--~~-~~  228 (285)
                               .+.+.|+.+|.++|.+++.++.+++++++++|++.+|||+..... ...+..+.. ...+....  +. .+
T Consensus       151 ---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (372)
T 1db3_A          151 ---------YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMD  221 (372)
T ss_dssp             ---------CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTT
T ss_pred             ---------CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCC
Confidence                     346789999999999999999888999999999999999754321 111222222 23343222  22 25


Q ss_pred             cCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          229 LNTSMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      ..++|+|++|+|++++.+++++. +++||++ ++.+|+.|+++.+.+.+|.
T Consensus       222 ~~~~~i~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~  271 (372)
T 1db3_A          222 SLRDWGHAKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGI  271 (372)
T ss_dssp             CEECCEEHHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTE
T ss_pred             ceeeeeEHHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCC
Confidence            67899999999999999998765 4788865 4689999999999998874

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=100.00  E-value=4.4e-35  Score=249.77  Aligned_cols=241  Identities=22%  Similarity=0.206  Sum_probs=184.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..       .....+...    .++.++.+|++|.+.+.+++++ 
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~   88 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFAT-------GRREHLKDH----PNLTFVEGSIADHALVNQLIGDL   88 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-------CCGGGSCCC----TTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCc-------cchhhHhhc----CCceEEEEeCCCHHHHHHHHhcc
Confidence            4689999999999999999999999999999999761       111112111    3789999999999999999987 


Q ss_pred             -CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeecc--CCCCcccccCCCCchhhhh
Q 023244           83 -CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYN--DKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 -~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~--~~~~~~~~e~~~~~~~~~~  159 (285)
                       +|+|||+|+..... ...... +++|+.++.++++++.+.+ +++||++||.++|+..  .... +++|++        
T Consensus        89 ~~D~vih~A~~~~~~-~~~~~~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~-~~~E~~--------  156 (333)
T 2q1w_A           89 QPDAVVHTAASYKDP-DDWYND-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPV-RLDHPR--------  156 (333)
T ss_dssp             CCSEEEECCCCCSCT-TCHHHH-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSB-CTTSCC--------
T ss_pred             CCcEEEECceecCCC-ccCChH-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCC-CcCCCC--------
Confidence             99999999986652 111123 8999999999999999988 8999999999876511  1112 666665        


Q ss_pred             hcCCCC-chhHhhHHHHHHHHHH-HHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHH
Q 023244          160 KLDSWG-KSYAISKTLTERAALE-FAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVD  237 (285)
Q Consensus       160 ~~~~~~-~~Y~~sK~~~E~~~~~-~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  237 (285)
                         .|. +.|+.+|.++|.+++. ++     +++++||+++|||+..   ...+..+..........+..+..++|++++
T Consensus       157 ---~p~~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~  225 (333)
T 2q1w_A          157 ---NPANSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGKKCFVTKARRDFVFVK  225 (333)
T ss_dssp             ---CCTTCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCC---SSHHHHHHHHHHTTCCCEEEECEECEEEHH
T ss_pred             ---CCCCCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCc---CcHHHHHHHHHHcCCeeeCCCceEeeEEHH
Confidence               133 6799999999999876 43     8999999999999821   233433333322222222235578999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      |+|++++.+++++. +++||+++ ..+|+.|+++.+.+.+|..
T Consensus       226 Dva~ai~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~  267 (333)
T 2q1w_A          226 DLARATVRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP  267 (333)
T ss_dssp             HHHHHHHHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence            99999999998776 66888754 6899999999999999864

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=100.00  E-value=3.2e-35  Score=251.62  Aligned_cols=252  Identities=18%  Similarity=0.222  Sum_probs=189.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..     .  ....+.... ...++.++.+|+.+..     +.++
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-----~--~~~~~~~~~-~~~~~~~~~~D~~~~~-----~~~~   92 (343)
T 2b69_A           26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT-----G--RKRNVEHWI-GHENFELINHDVVEPL-----YIEV   92 (343)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-----C--CGGGTGGGT-TCTTEEEEECCTTSCC-----CCCC
T ss_pred             CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc-----c--chhhhhhhc-cCCceEEEeCccCChh-----hcCC
Confidence            4689999999999999999999999999999999751     1  111111111 1247899999998863     4679


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++ ...+++|+.++.++++++++.+ + +|||+||.++|+..  ...+++|+.+...++    
T Consensus        93 d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g~~--~~~~~~E~~~~~~~~----  163 (343)
T 2b69_A           93 DQIYHLASPASPPNYMYNP-IKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDP--EVHPQSEDYWGHVNP----  163 (343)
T ss_dssp             SEEEECCSCCSHHHHTTCH-HHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSC--SSSSBCTTCCCBCCS----
T ss_pred             CEEEECccccCchhhhhCH-HHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhCCC--CCCCCcccccccCCC----
Confidence            999999997653  23344 4889999999999999999988 5 99999999876543  235677775432111    


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHH-HHHhcCccccc--cccCcceeeHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL-ALILGNREEYG--FLLNTSMVHVDD  238 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~D  238 (285)
                      ..+.+.|+.+|.++|.+++.++++++++++++||+++|||+........+..+. ....+....+.  .+..++|+|++|
T Consensus       164 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D  243 (343)
T 2b69_A          164 IGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSD  243 (343)
T ss_dssp             SSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHH
Confidence            234578999999999999999888899999999999999976443223333333 33344443222  245789999999


Q ss_pred             HHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|++++.+++.+ .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       244 va~a~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~  283 (343)
T 2b69_A          244 LVNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGS  283 (343)
T ss_dssp             HHHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCC
Confidence            999999999865 356888765 689999999999998875

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=100.00  E-value=3.2e-35  Score=251.54  Aligned_cols=253  Identities=18%  Similarity=0.151  Sum_probs=194.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +|+|||||||||||++++++|+++|++|++++|+..     ... ...+.... ...++.++.+|++|.+++.+++++  
T Consensus         3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----~~~-~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~   75 (345)
T 2z1m_A            3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG-----EFA-SWRLKELG-IENDVKIIHMDLLEFSNIIRTIEKVQ   75 (345)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS-----TTT-THHHHHTT-CTTTEEECCCCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc-----ccc-cccHhhcc-ccCceeEEECCCCCHHHHHHHHHhcC
Confidence            579999999999999999999999999999999861     111 11222221 124789999999999999999985  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTV-KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      +|+|||+||....  +..++ ...+++|+.++.++++++.+.+ + ++|||+||.++|+..  ...+++|+++.      
T Consensus        76 ~d~vih~A~~~~~~~~~~~~-~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg~~--~~~~~~e~~~~------  145 (345)
T 2z1m_A           76 PDEVYNLAAQSFVGVSFEQP-ILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFGKV--QEIPQTEKTPF------  145 (345)
T ss_dssp             CSEEEECCCCCCHHHHTTSH-HHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGCSC--SSSSBCTTSCC------
T ss_pred             CCEEEECCCCcchhhhhhCH-HHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcCCC--CCCCCCccCCC------
Confidence            6999999997653  23344 4889999999999999999887 6 899999999877544  23467777653      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccHHHHH-HHHhcCccc-c-c-cccCccee
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSL-ALILGNREE-Y-G-FLLNTSMV  234 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~-~~~~~~~~~-~-~-~~~~~~~i  234 (285)
                         .+.+.|+.||.++|.+++.++.+++++++++|+.++|||+..... ...+.... ....+.... + . ....++|+
T Consensus       146 ---~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (345)
T 2z1m_A          146 ---YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWG  222 (345)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCE
T ss_pred             ---CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeE
Confidence               356789999999999999999888999999999999999754321 11111122 222333222 2 1 14567899


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|+|++++.+++++. .++||++ ++.+|+.|+++.+.+.+|.
T Consensus       223 ~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  266 (345)
T 2z1m_A          223 YAPEYVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGF  266 (345)
T ss_dssp             EHHHHHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             EHHHHHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCC
Confidence            99999999999998765 4788865 5689999999999999886

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=100.00  E-value=1.9e-35  Score=252.48  Aligned_cols=255  Identities=19%  Similarity=0.202  Sum_probs=188.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |+|||||||||||++++++|+++|++|++++|...    ...+....+....  ..++.++.+|++|++.+.++++  ++
T Consensus         1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~----~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~   74 (338)
T 1udb_A            1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN----SKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCC----cchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCC
Confidence            47999999999999999999999999999987541    0111111121110  1367889999999999999887  48


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+||....  ...++ ..++++|+.++.++++++++.+ +++||++||.++|+..  ...+++|+++.        
T Consensus        75 D~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g~~--~~~~~~e~~~~--------  142 (338)
T 1udb_A           75 DTVIHFAGLKAVGESVQKP-LEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDN--PKIPYVESFPT--------  142 (338)
T ss_dssp             SEEEECCSCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSC--CSSSBCTTSCC--------
T ss_pred             CEEEECCccCccccchhcH-HHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhCCC--CCCCcCcccCC--------
Confidence            999999997543  11233 4789999999999999999888 8999999999876543  34466776643        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcCcccc-------
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREEY-------  225 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~-------  225 (285)
                      .++.+.|+.||.++|.+++.++.+. +++++++||+++|||.....        .......+.....+....+       
T Consensus       143 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  222 (338)
T 1udb_A          143 GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCCCChHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcc
Confidence            1235789999999999999998776 89999999999999853211        1223444444333322111       


Q ss_pred             ---ccccCcceeeHHHHHHHHHHhhcCC--CCC-ceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          226 ---GFLLNTSMVHVDDVARAHIFLLEYP--DAK-GRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 ---~~~~~~~~i~~~D~a~~~~~~~~~~--~~~-~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                         .....++|||++|+|++++.++++.  ..+ ++||+++ +.+|+.|+++.+.+.+|.
T Consensus       223 ~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~  282 (338)
T 1udb_A          223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK  282 (338)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS
T ss_pred             cCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC
Confidence               1245689999999999999998753  233 4788764 689999999999998874

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=100.00  E-value=8.2e-36  Score=252.30  Aligned_cols=234  Identities=18%  Similarity=0.163  Sum_probs=159.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +|+|||||||||||++++++|+++|++|++++|+..        .           ++  ++.+|++|.+.+.+++++  
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~-----------~~--~~~~Dl~d~~~~~~~~~~~~   60 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRA--------R-----------PK--FEQVNLLDSNAVHHIIHDFQ   60 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------CHHHHHHHC
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCC--------C-----------CC--eEEecCCCHHHHHHHHHhhC
Confidence            579999999999999999999999999999999761        1           12  678999999999998875  


Q ss_pred             CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|+|||+|+.....  ..++ ...+++|+.++.++++++.+.+ + +|||+||.++|+.   ...+++|+++.       
T Consensus        61 ~d~vih~A~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~---~~~~~~E~~~~-------  127 (315)
T 2ydy_A           61 PHVIVHCAAERRPDVVENQP-DAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG---TNPPYREEDIP-------  127 (315)
T ss_dssp             CSEEEECC--------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS---SSCSBCTTSCC-------
T ss_pred             CCEEEECCcccChhhhhcCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC---CCCCCCCCCCC-------
Confidence            89999999976542  2344 4889999999999999999988 5 9999999998754   34567887753       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHH--hcCccccccccCcceeeHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI--LGNREEYGFLLNTSMVHVDD  238 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~D  238 (285)
                        .+.+.|+.+|.++|.+++.+    +++++++||+.||||...... ..+..+....  .+.......+..++|+|++|
T Consensus       128 --~~~~~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  200 (315)
T 2ydy_A          128 --APLNLYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEE-SAVTVMFDKVQFSNKSANMDHWQQRFPTHVKD  200 (315)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGG-STTGGGHHHHHCCSSCEEEECSSBBCCEEHHH
T ss_pred             --CCcCHHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccc-cHHHHHHHHHHhcCCCeeeccCceECcEEHHH
Confidence              35678999999999998764    578899999999999765211 1121122222  23333333366789999999


Q ss_pred             HHHHHHHhhcCC----CCCceEEEec-cccCHHHHHHHHHhhCCCC
Q 023244          239 VARAHIFLLEYP----DAKGRYICSS-HTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       239 ~a~~~~~~~~~~----~~~~~~~~~~-~~~s~~e~~~~i~~~~~~~  279 (285)
                      +|++++.+++++    ..+++||+++ +.+|+.|+++.+.+.+|..
T Consensus       201 va~a~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~  246 (315)
T 2ydy_A          201 VATVCRQLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLP  246 (315)
T ss_dssp             HHHHHHHHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCC
T ss_pred             HHHHHHHHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCC
Confidence            999999998753    4567888654 6899999999999998863

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2e-35  Score=263.18  Aligned_cols=261  Identities=18%  Similarity=0.173  Sum_probs=190.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc---CCeEEEEecCCCCccccCccchhhhhcCCC-------------CCCCEEEEe
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH---GYSVTTTVRSELDPEHRNSKDLSFLKNLPG-------------ASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~   67 (285)
                      .+|+|||||||||||++|+++|++.   |++|++++|+.     ........+.+...             ...++.++.
T Consensus        72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~  146 (478)
T 4dqv_A           72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAE-----SDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVA  146 (478)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSS-----SHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCC-----CcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEE
Confidence            4789999999999999999999998   89999999987     11111111111100             124899999


Q ss_pred             cCCC------ChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccC
Q 023244           68 ADLS------HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        68 ~Dl~------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                      +|++      |.+.+.++++++|+|||+||..+.  .++ ...+++|+.++.+++++|++.+ +++|||+||.++|+.. 
T Consensus       147 ~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~-~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~~~-  221 (478)
T 4dqv_A          147 GDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPY-HELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGAAI-  221 (478)
T ss_dssp             CCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSC-CEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGTTS-
T ss_pred             eECCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCH-HHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcCcc-
Confidence            9998      666899999999999999998776  233 4788999999999999999988 8999999999875433 


Q ss_pred             CCCcccccCCCCchhhh--hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC---CCccHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYI--RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK---FAGSVRSSLA  216 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~--~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~---~~~~~~~~~~  216 (285)
                       ...+++|+++..+...  .....+.+.|+.||+++|.+++.++++.|++++++|||+|||+.....   ...++..+..
T Consensus       222 -~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~  300 (478)
T 4dqv_A          222 -EPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVL  300 (478)
T ss_dssp             -CTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHH
T ss_pred             -CCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHH
Confidence             3456677665321100  000122356999999999999999887899999999999999864222   2233333332


Q ss_pred             HHh--cCcc-ccc--------cccCcceeeHHHHHHHHHHhhcC----C-CCCceEEEec-cc--cCHHHHHHHHHhh
Q 023244          217 LIL--GNRE-EYG--------FLLNTSMVHVDDVARAHIFLLEY----P-DAKGRYICSS-HT--LTIQEMAEFLSAK  275 (285)
Q Consensus       217 ~~~--~~~~-~~~--------~~~~~~~i~~~D~a~~~~~~~~~----~-~~~~~~~~~~-~~--~s~~e~~~~i~~~  275 (285)
                      ...  +..+ .+.        .+..++|+|++|+|++++.++.+    + ..+++||+++ +.  +|+.|+++.+.+.
T Consensus       301 ~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~  378 (478)
T 4dqv_A          301 SLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA  378 (478)
T ss_dssp             HHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred             HHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence            222  2111 111        14568999999999999999875    3 3345798765 55  9999999999985

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=100.00  E-value=2.6e-35  Score=245.90  Aligned_cols=222  Identities=18%  Similarity=0.135  Sum_probs=175.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |+|+|||||| ||||++|+++|+++|++|++++|++        .....+...     +++++.+|++|.+     ++++
T Consensus         4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~--------~~~~~~~~~-----~~~~~~~D~~d~~-----~~~~   64 (286)
T 3ius_A            4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNP--------DQMEAIRAS-----GAEPLLWPGEEPS-----LDGV   64 (286)
T ss_dssp             -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCG--------GGHHHHHHT-----TEEEEESSSSCCC-----CTTC
T ss_pred             CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcCh--------hhhhhHhhC-----CCeEEEecccccc-----cCCC
Confidence            4689999998 9999999999999999999999987        333333332     7899999999955     6789


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHh--cCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK--SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+.....  ++          .+.++++++++  .+ +++|||+||.++|+..  ...+++|+++.        
T Consensus        65 d~vi~~a~~~~~~--~~----------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~--~~~~~~E~~~~--------  121 (286)
T 3ius_A           65 THLLISTAPDSGG--DP----------VLAALGDQIAARAAQ-FRWVGYLSTTAVYGDH--DGAWVDETTPL--------  121 (286)
T ss_dssp             CEEEECCCCBTTB--CH----------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCC--TTCEECTTSCC--------
T ss_pred             CEEEECCCccccc--cH----------HHHHHHHHHHhhcCC-ceEEEEeecceecCCC--CCCCcCCCCCC--------
Confidence            9999999976542  11          24688899988  55 8999999999877543  34577888764        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-cccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a  240 (285)
                       .|.+.|+.+|.++|.+++.+   .+++++++||+++|||+.... ..       ...+....+. ....++|+|++|+|
T Consensus       122 -~p~~~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~-~~-------~~~~~~~~~~~~~~~~~~i~v~Dva  189 (286)
T 3ius_A          122 -TPTAARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF-SK-------LGKGGIRRIIKPGQVFSRIHVEDIA  189 (286)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS-TT-------SSSSCCCEEECTTCCBCEEEHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH-HH-------HhcCCccccCCCCcccceEEHHHHH
Confidence             45678999999999999876   589999999999999975431 11       1123322222 25678999999999


Q ss_pred             HHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCCC
Q 023244          241 RAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~~  279 (285)
                      ++++.+++++..+++||++ ++.+|+.|+++.+++.+|..
T Consensus       190 ~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~  229 (286)
T 3ius_A          190 QVLAASMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLP  229 (286)
T ss_dssp             HHHHHHHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCC
Confidence            9999999988877789876 56899999999999998863

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=100.00  E-value=3.2e-35  Score=255.04  Aligned_cols=255  Identities=17%  Similarity=0.179  Sum_probs=191.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCC-CEEEEecCCCChhhHHHHhcC-
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASE-RLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      |+|||||||||||++|+++|+++|++|++++|+.....   ......+. ....... ++.++.+|++|.+.+.+++++ 
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFN---TQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCC---CTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcccc---chhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc
Confidence            68999999999999999999999999999999862100   00011110 0000122 788999999999999999885 


Q ss_pred             -CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCcc-----EEEEeccceeeeccCCCCcccccCCCCc
Q 023244           83 -CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVK-----RVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (285)
Q Consensus        83 -~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (285)
                       +|+|||+|+.....  ..++ ...+++|+.++.++++++++.+ ++     +|||+||.++|+...  . +++|+++. 
T Consensus       106 ~~d~Vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~~~--~-~~~E~~~~-  179 (381)
T 1n7h_A          106 KPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGSTP--P-PQSETTPF-  179 (381)
T ss_dssp             CCSEEEECCSCCCHHHHHHSH-HHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTTSC--S-SBCTTSCC-
T ss_pred             CCCEEEECCcccCccccccCH-HHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCCCC--C-CCCCCCCC-
Confidence             69999999976531  2234 4889999999999999999876 65     999999998875442  2 77887753 


Q ss_pred             hhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC-ccHHHHH-HHHhcCccc--cc-ccc
Q 023244          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA-GSVRSSL-ALILGNREE--YG-FLL  229 (285)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~-~~~~~~~-~~~~~~~~~--~~-~~~  229 (285)
                              .+.+.|+.+|.++|.+++.++.+++++++++|++++|||+...... ..+..+. ....+....  +. .+.
T Consensus       180 --------~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~  251 (381)
T 1n7h_A          180 --------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  251 (381)
T ss_dssp             --------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             --------CCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCc
Confidence                    3567899999999999999998889999999999999997543211 1122222 223343222  12 255


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+|++++.+++++. .++||+++ +.+|+.|+++.+.+.+|.
T Consensus       252 ~~~~v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~  300 (381)
T 1n7h_A          252 SRDWGFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGL  300 (381)
T ss_dssp             EEECEEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             eeeeEEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCC
Confidence            7899999999999999998765 47888655 689999999999999885

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2.9e-35  Score=251.73  Aligned_cols=250  Identities=17%  Similarity=0.102  Sum_probs=192.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-------CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-------YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGF   76 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   76 (285)
                      ++|+|||||||||||++|+++|+++|       ++|++++|+..        ....     ....++.++.+|++|.+.+
T Consensus        13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~--------~~~~-----~~~~~~~~~~~Dl~d~~~~   79 (342)
T 2hrz_A           13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQP--------EAPA-----GFSGAVDARAADLSAPGEA   79 (342)
T ss_dssp             SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCC--------CCCT-----TCCSEEEEEECCTTSTTHH
T ss_pred             cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCC--------cccc-----ccCCceeEEEcCCCCHHHH
Confidence            46799999999999999999999999       89999999761        1100     1124788999999999999


Q ss_pred             HHHhc-CCCEEEEecccCCC-CCCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeccceeeeccCCCCcccccC
Q 023244           77 DAAIA-GCTGVLHVATPVDF-EDKEPEEVITQRAINGTLGILKSCLKSG----TVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        77 ~~~~~-~~d~vih~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                      .++++ ++|+|||+|+.... ...++ ...+++|+.++.++++++++.+    .+++||++||..+|+..  ...+++|+
T Consensus        80 ~~~~~~~~d~vih~A~~~~~~~~~~~-~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~--~~~~~~E~  156 (342)
T 2hrz_A           80 EKLVEARPDVIFHLAAIVSGEAELDF-DKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAP--LPYPIPDE  156 (342)
T ss_dssp             HHHHHTCCSEEEECCCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSS--CCSSBCTT
T ss_pred             HHHHhcCCCEEEECCccCcccccccH-HHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCC--CCCCcCCC
Confidence            99985 89999999997652 12234 4889999999999999998764    36899999999876543  23567888


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceec-CCCCCCC-CccHHHHHHH-HhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG-PFICPKF-AGSVRSSLAL-ILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g-~~~~~~~-~~~~~~~~~~-~~~~~~~~~~  227 (285)
                      ++.         .+.++|+.+|.++|.+++.++++.+++.+++|++.+|| |+..... ..++..+... ..+....++.
T Consensus       157 ~~~---------~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (342)
T 2hrz_A          157 FHT---------TPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPV  227 (342)
T ss_dssp             CCC---------CCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECS
T ss_pred             CCC---------CCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccC
Confidence            764         35578999999999999999877789999999999998 6643221 2233333333 3343322222


Q ss_pred             --ccCcceeeHHHHHHHHHHhhcCCC----CCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          228 --LLNTSMVHVDDVARAHIFLLEYPD----AKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 --~~~~~~i~~~D~a~~~~~~~~~~~----~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                        +..++++|++|+|++++.+++.+.    .+++||++++.+|+.|+++.+.+.+|.
T Consensus       228 ~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~  284 (342)
T 2hrz_A          228 PESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGE  284 (342)
T ss_dssp             CTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCH
T ss_pred             CCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCc
Confidence              345678999999999999998763    356899877789999999999998764

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=100.00  E-value=8e-35  Score=256.18  Aligned_cols=256  Identities=16%  Similarity=0.179  Sum_probs=186.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh----cC------CCCCCCEEEEecCCCCh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK----NL------PGASERLRIFHADLSHP   73 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~----~~------~~~~~~~~~~~~Dl~d~   73 (285)
                      .+|+|||||||||||++|+++|++.|++|++++|+.     ........+.    ..      .....++.++.+|++|+
T Consensus        68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~-----~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  142 (427)
T 4f6c_A           68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD-----NEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  142 (427)
T ss_dssp             CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECS-----SHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---
T ss_pred             CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCC-----ChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCc
Confidence            357999999999999999999999999999999987     1100111111    00      00124899999999998


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee--eeccCCCCcccccCC
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA--VFYNDKDVDMMDETF  151 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~--~~~~~~~~~~~~e~~  151 (285)
                      +.+. .+.++|+|||+||..... .++ ...+++|+.++.+++++|.+ + +++|||+||.++  +........+++|++
T Consensus       143 ~~l~-~~~~~d~Vih~A~~~~~~-~~~-~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~G~~~~~~~~~~~~~E~~  217 (427)
T 4f6c_A          143 DDVV-LPENMDTIIHAGARTDHF-GDD-DEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEAD  217 (427)
T ss_dssp             CCCC-CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGGGSEECSSCSCCEECTTC
T ss_pred             ccCC-CcCCCCEEEECCcccCCC-CCH-HHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHhCCCccCCCCCccccccc
Confidence            8877 667899999999987643 233 48899999999999999998 5 799999999987  111223456778887


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC-----ccHHHHHHHH-hcCcccc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA-----GSVRSSLALI-LGNREEY  225 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~-----~~~~~~~~~~-~~~~~~~  225 (285)
                      +...      ..+.+.|+.+|+++|.+++.++ +.|++++++|||+||||.......     ..+..+.... .....+.
T Consensus       218 ~~~~------~~~~~~Y~~sK~~~E~~~~~~~-~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (427)
T 4f6c_A          218 VYKG------QLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV  290 (427)
T ss_dssp             SCSS------CCCCSHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEH
T ss_pred             cccC------CCCCCchHHHHHHHHHHHHHHH-HcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCC
Confidence            6321      1356889999999999999976 479999999999999997654321     1233333333 3333222


Q ss_pred             c-cccCcceeeHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCC
Q 023244          226 G-FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       226 ~-~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~  277 (285)
                      . .+..++|++++|+|++++.++..+..+++||++ ++.+++.|+++.+.+ ++
T Consensus       291 ~~~~~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g  343 (427)
T 4f6c_A          291 SMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE  343 (427)
T ss_dssp             HHHTCEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred             ccccceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence            2 267889999999999999999887766789875 468999999999997 44

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=100.00  E-value=9.8e-36  Score=249.98  Aligned_cols=226  Identities=16%  Similarity=0.062  Sum_probs=180.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   83 (285)
                      |+|||||||||||++++++|+ +|++|++++|+.                        .++.+|++|.+.+.+++++  +
T Consensus         1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~------------------------~~~~~D~~d~~~~~~~~~~~~~   55 (299)
T 1n2s_A            1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHS------------------------KEFCGDFSNPKGVAETVRKLRP   55 (299)
T ss_dssp             CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTC------------------------SSSCCCTTCHHHHHHHHHHHCC
T ss_pred             CeEEEECCCCHHHHHHHHHhh-cCCeEEEecccc------------------------ccccccCCCHHHHHHHHHhcCC
Confidence            479999999999999999999 899999999976                        0246999999999999986  9


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++ ...+++|+.++.++++++++.+ + +|||+||.++|+..  ...+++|+++.        
T Consensus        56 d~vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~~~--~~~~~~E~~~~--------  122 (299)
T 1n2s_A           56 DVIVNAAAHTAVDKAESEP-ELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFPGT--GDIPWQETDAT--------  122 (299)
T ss_dssp             SEEEECCCCCCHHHHTTCH-HHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSCCC--TTCCBCTTSCC--------
T ss_pred             CEEEECcccCCHhhhhcCH-HHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEeCC--CCCCCCCCCCC--------
Confidence            999999997653  23455 4889999999999999999888 5 89999999887554  23567787753        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       .|.+.|+.+|.++|.+++.++    .+++++||+++|||+..    .++..+... ..+.......+..++|+|++|+|
T Consensus       123 -~p~~~Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  193 (299)
T 1n2s_A          123 -SPLNVYGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGN----NFAKTMLRLAKERQTLSVINDQYGAPTGAELLA  193 (299)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSC----CHHHHHHHHHHHCSEEEEECSCEECCEEHHHHH
T ss_pred             -CCccHHHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcC----cHHHHHHHHHhcCCCEEeecCcccCCeeHHHHH
Confidence             356789999999999997754    48999999999999753    233333333 33333333336678999999999


Q ss_pred             HHHHHhhcCC--C--CCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYP--D--AKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~--~--~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ++++.+++++  .  .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~  236 (299)
T 1n2s_A          194 DCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARK  236 (299)
T ss_dssp             HHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCC
Confidence            9999999875  2  367898655 689999999999987753

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=100.00  E-value=2.7e-35  Score=251.91  Aligned_cols=232  Identities=17%  Similarity=0.236  Sum_probs=184.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CC-eEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GY-SVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+||||||||+||++++++|+++ |+ +|++++|+.        .....+. .+.  ..++.++.+|++|.+.+.+++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~--------~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~   89 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDE--------LKQSEMAMEFN--DPRMRFFIGDVRDLERLNYAL   89 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCH--------HHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECCh--------hhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHH
Confidence            3589999999999999999999999 97 999999976        2222221 111  247999999999999999999


Q ss_pred             cCCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           81 AGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        81 ~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                      +++|+|||+||....  ...++ ...+++|+.++.++++++.+.+ +++||++||..++                     
T Consensus        90 ~~~D~Vih~Aa~~~~~~~~~~~-~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~---------------------  146 (344)
T 2gn4_A           90 EGVDICIHAAALKHVPIAEYNP-LECIKTNIMGASNVINACLKNA-ISQVIALSTDKAA---------------------  146 (344)
T ss_dssp             TTCSEEEECCCCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGS---------------------
T ss_pred             hcCCEEEECCCCCCCCchhcCH-HHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccC---------------------
Confidence            999999999997653  12244 4889999999999999999998 9999999997643                     


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHH-hcC-ccccc-cccCcc
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-LGN-REEYG-FLLNTS  232 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~-~~~~~-~~~~~~  232 (285)
                          .|.++|+.||.++|.+++.++++   .|++++++|||+||||..     ..+..+.... .+. ...+. ....++
T Consensus       147 ----~p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~-----~~i~~~~~~~~~g~~~~~i~~~~~~r~  217 (344)
T 2gn4_A          147 ----NPINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRG-----SVVPFFKKLVQNKASEIPITDIRMTRF  217 (344)
T ss_dssp             ----SCCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTT-----SHHHHHHHHHHHTCCCEEESCTTCEEE
T ss_pred             ----CCccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCC-----CHHHHHHHHHHcCCCceEEeCCCeEEe
Confidence                12367999999999999988754   479999999999999863     2334444333 333 22222 255678


Q ss_pred             eeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCC
Q 023244          233 MVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~  277 (285)
                      |+|++|+|++++.+++++..+.+|++++..+++.|+++.+.+.++
T Consensus       218 ~i~v~D~a~~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~  262 (344)
T 2gn4_A          218 WITLDEGVSFVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP  262 (344)
T ss_dssp             EECHHHHHHHHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred             eEEHHHHHHHHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence            999999999999999876555688888778999999999987653

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=100.00  E-value=7.6e-35  Score=243.78  Aligned_cols=222  Identities=12%  Similarity=0.073  Sum_probs=179.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      .|+|||||||||||++++++|+++|++|++++|+.                            +|++|.+.+.++++  +
T Consensus        12 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------~Dl~d~~~~~~~~~~~~   63 (292)
T 1vl0_A           12 HMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEKK   63 (292)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHHC
T ss_pred             cceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------------CCCCCHHHHHHHHHhcC
Confidence            57999999999999999999999999999999864                            89999999999998  7


Q ss_pred             CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|+|||+|+.....  ..++ ...+++|+.++.++++++++.+ + +|||+||.++|+..  ...+++|+++.       
T Consensus        64 ~d~vih~A~~~~~~~~~~~~-~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~~~--~~~~~~E~~~~-------  131 (292)
T 1vl0_A           64 PNVVINCAAHTAVDKCEEQY-DLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFDGE--AKEPITEFDEV-------  131 (292)
T ss_dssp             CSEEEECCCCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSCSC--CSSCBCTTSCC-------
T ss_pred             CCEEEECCccCCHHHHhcCH-HHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeECCC--CCCCCCCCCCC-------
Confidence            99999999976531  2234 4889999999999999999988 6 99999999877543  23567887753       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHH-hcCccccccccCcceeeHHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI-LGNREEYGFLLNTSMVHVDDV  239 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~  239 (285)
                        .+.+.|+.+|.++|.+++.++    .+++++||+.+||| ..    ..+..+.... .+.......+..++|+|++|+
T Consensus       132 --~~~~~Y~~sK~~~E~~~~~~~----~~~~~lR~~~v~G~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  200 (292)
T 1vl0_A          132 --NPQSAYGKTKLEGENFVKALN----PKYYIVRTAWLYGD-GN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDL  200 (292)
T ss_dssp             --CCCSHHHHHHHHHHHHHHHHC----SSEEEEEECSEESS-SS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHH
T ss_pred             --CCccHHHHHHHHHHHHHHhhC----CCeEEEeeeeeeCC-Cc----ChHHHHHHHHhcCCcEEeecCeeeCCccHHHH
Confidence              345789999999999997753    57999999999998 22    2333333332 333333333567899999999


Q ss_pred             HHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          240 ARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |++++.+++++ .+++||+++ +.+|+.|+++.+.+.+|.
T Consensus       201 a~~~~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~  239 (292)
T 1vl0_A          201 ARVVLKVIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGI  239 (292)
T ss_dssp             HHHHHHHHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCC
Confidence            99999999876 667898655 689999999999998875

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=100.00  E-value=1.6e-34  Score=259.49  Aligned_cols=256  Identities=17%  Similarity=0.198  Sum_probs=188.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh----hcC------CCCCCCEEEEecCCCCh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL----KNL------PGASERLRIFHADLSHP   73 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~Dl~d~   73 (285)
                      .+|+|||||||||||++|+++|.+.|++|++++|+.     ........+    ...      .....++.++.+|++|+
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~-----~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~  223 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRAD-----NEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECM  223 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESS-----SHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBC
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCC-----ChHHHHHHHHHHHHHhcccccchhccCceEEEecCCccc
Confidence            357999999999999999999988899999999987     110011111    000      00134899999999998


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecccee--eeccCCCCcccccCC
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAA--VFYNDKDVDMMDETF  151 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~--~~~~~~~~~~~~e~~  151 (285)
                      +.+. ...++|+|||+|+.....  .....++++|+.++.+++++|++ + .++|||+||.++  +........+++|++
T Consensus       224 ~~l~-~~~~~D~Vih~Aa~~~~~--~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~  298 (508)
T 4f6l_B          224 DDVV-LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEAD  298 (508)
T ss_dssp             SSCC-CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTC
T ss_pred             ccCC-CccCCCEEEECCceecCC--CCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCccccccc
Confidence            8777 667899999999987642  22347889999999999999998 4 699999999987  222223456778877


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-----CccHHHHHHHHhcCc-ccc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-----AGSVRSSLALILGNR-EEY  225 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~-~~~  225 (285)
                      +...      ..+.+.|+.+|+++|.+++.++ +.|++++++||++||||......     ...+..+.......+ .+.
T Consensus       299 ~~~~------~~~~~~Y~~sK~~~E~~~~~~~-~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~  371 (508)
T 4f6l_B          299 VYKG------QLLTSPYTRSKFYSELKVLEAV-NNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGV  371 (508)
T ss_dssp             SCSS------BCCCSHHHHHHHHHHHHHHHHH-HTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEET
T ss_pred             cccc------ccCCCcHHHHHHHHHHHHHHHH-HcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCC
Confidence            6321      1256889999999999999976 47999999999999999765432     122333344333332 222


Q ss_pred             c-cccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhC
Q 023244          226 G-FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKY  276 (285)
Q Consensus       226 ~-~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~  276 (285)
                      . .+..++|++++|+|++++.++.++..+++||+++ +.+++.|+++.+++..
T Consensus       372 ~~g~~~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~  424 (508)
T 4f6l_B          372 SMAEMPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE  424 (508)
T ss_dssp             TGGGSEEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred             CccCceEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence            2 3678899999999999999998877667898755 6899999999998754

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=100.00  E-value=2e-34  Score=238.23  Aligned_cols=212  Identities=20%  Similarity=0.188  Sum_probs=173.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+||||||||+||++++++|+++|++|++++|+..        ..        ...++.++.+|++|.+++.++++++|
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~--------~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D   66 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL--------DP--------AGPNEECVQCDLADANAVNAMVAGCD   66 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC--------CC--------CCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc--------cc--------cCCCCEEEEcCCCCHHHHHHHHcCCC
Confidence            578999999999999999999999999999999871        11        13478999999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+||....  ..+ +..+++|+.++.++++++++.+ .++||++||.++++.. ....+++|+.+.         .+
T Consensus        67 ~vi~~Ag~~~~--~~~-~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~-~~~~~~~e~~~~---------~~  132 (267)
T 3rft_A           67 GIVHLGGISVE--KPF-EQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYY-PQTERLGPDVPA---------RP  132 (267)
T ss_dssp             EEEECCSCCSC--CCH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTS-BTTSCBCTTSCC---------CC
T ss_pred             EEEECCCCcCc--CCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCC-CCCCCCCCCCCC---------CC
Confidence            99999998433  333 5899999999999999999888 8999999999887543 334567777653         45


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      .+.|+.||.++|.+++.++++++++++++||+.|+|+....                      ...++|++++|+++++.
T Consensus       133 ~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~----------------------~~~~~~~~~~d~a~~~~  190 (267)
T 3rft_A          133 DGLYGVSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNY----------------------RMLSTWFSHDDFVSLIE  190 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCST----------------------THHHHBCCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCC----------------------CceeeEEcHHHHHHHHH
Confidence            67899999999999999998899999999999999873221                      11237899999999999


Q ss_pred             HhhcCCCCCc-eE-EEeccccCHHHH
Q 023244          245 FLLEYPDAKG-RY-ICSSHTLTIQEM  268 (285)
Q Consensus       245 ~~~~~~~~~~-~~-~~~~~~~s~~e~  268 (285)
                      .+++.+.... ++ .++++..++.++
T Consensus       191 ~~~~~~~~~~~~~~~~s~~~~~~~~~  216 (267)
T 3rft_A          191 AVFRAPVLGCPVVWGASANDAGWWDN  216 (267)
T ss_dssp             HHHHCSCCCSCEEEECCCCTTCCBCC
T ss_pred             HHHhCCCCCceEEEEeCCCCCCcccC
Confidence            9998876643 44 456655554443

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=100.00  E-value=4.1e-34  Score=264.21  Aligned_cols=256  Identities=20%  Similarity=0.270  Sum_probs=193.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh-HHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~   81 (285)
                      ++|+|||||||||||++|+++|+++ |++|++++|+.        .....+..    ..+++++.+|++|.++ +.++++
T Consensus       314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~--------~~~~~~~~----~~~v~~v~~Dl~d~~~~~~~~~~  381 (660)
T 1z7e_A          314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS--------DAISRFLN----HPHFHFVEGDISIHSEWIEYHVK  381 (660)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCC--------TTTGGGTT----CTTEEEEECCTTTCHHHHHHHHH
T ss_pred             cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCc--------hhhhhhcc----CCceEEEECCCCCcHHHHHHhhc
Confidence            4678999999999999999999998 89999999986        21111111    2478999999999865 777888


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++|+|||+||....  ...++ ...+++|+.++.++++++++.+  ++|||+||.++|+..  ...+++|+++...  ..
T Consensus       382 ~~D~Vih~Aa~~~~~~~~~~~-~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg~~--~~~~~~E~~~~~~--~~  454 (660)
T 1z7e_A          382 KCDVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMC--SDKYFDEDHSNLI--VG  454 (660)
T ss_dssp             HCSEEEECCCCCCTHHHHHSH-HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTC--CSSSBCTTTCCEE--EC
T ss_pred             CCCEEEECceecCccccccCH-HHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcCCC--CCcccCCCccccc--cC
Confidence            99999999997654  12234 4789999999999999999887  899999999877543  2346777765210  01


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC------CCccHHHHHH-HHhcCccccc--cccC
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK------FAGSVRSSLA-LILGNREEYG--FLLN  230 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~------~~~~~~~~~~-~~~~~~~~~~--~~~~  230 (285)
                      +...+.+.|+.||.++|.+++.++++.|++++++||+++|||+....      ....+..+.. ...+....+.  .+..
T Consensus       455 p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~  534 (660)
T 1z7e_A          455 PVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQK  534 (660)
T ss_dssp             CTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCE
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeE
Confidence            11234568999999999999999888899999999999999975421      1223333333 3344443222  2567


Q ss_pred             cceeeHHHHHHHHHHhhcCCC---CCceEEEec-c-ccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPD---AKGRYICSS-H-TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~-~-~~s~~e~~~~i~~~~~~  278 (285)
                      ++|+|++|+|++++.+++++.   .+++||+++ + .+|+.|+++.+.+.+|.
T Consensus       535 ~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~  587 (660)
T 1z7e_A          535 RCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK  587 (660)
T ss_dssp             EECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHH
T ss_pred             EEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcC
Confidence            899999999999999998764   345788766 3 79999999999987653

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=100.00  E-value=1e-34  Score=233.02  Aligned_cols=209  Identities=16%  Similarity=0.169  Sum_probs=167.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC-hhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~d   84 (285)
                      |+||||||||+||++++++|+++|++|++++|+.        +....   .    .+++++.+|++| .+++.++++++|
T Consensus         1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~---~----~~~~~~~~D~~d~~~~~~~~~~~~d   65 (219)
T 3dqp_A            1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV--------EQVPQ---Y----NNVKAVHFDVDWTPEEMAKQLHGMD   65 (219)
T ss_dssp             CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSG--------GGSCC---C----TTEEEEECCTTSCHHHHHTTTTTCS
T ss_pred             CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCc--------cchhh---c----CCceEEEecccCCHHHHHHHHcCCC
Confidence            4799999999999999999999999999999987        11111   1    489999999999 999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+|+....       ..+++|+.++.++++++++.+ +++||++||..++...     +..| ++         ..+
T Consensus        66 ~vi~~ag~~~~-------~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~-----~~~e-~~---------~~~  122 (219)
T 3dqp_A           66 AIINVSGSGGK-------SLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQPE-----KWIG-AG---------FDA  122 (219)
T ss_dssp             EEEECCCCTTS-------SCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCGG-----GCCS-HH---------HHH
T ss_pred             EEEECCcCCCC-------CcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCCC-----cccc-cc---------ccc
Confidence            99999997653       356778999999999999988 8999999998654322     2223 11         123


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      .+.|+.+|.++|.+++   +..+++++++||+.+||+.......                + .+..++|++++|+|++++
T Consensus       123 ~~~Y~~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~----------------~-~~~~~~~i~~~Dva~~i~  182 (219)
T 3dqp_A          123 LKDYYIAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLID----------------I-NDEVSASNTIGDVADTIK  182 (219)
T ss_dssp             THHHHHHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE----------------E-SSSCCCCEEHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCccc----------------c-CCCcCCcccHHHHHHHHH
Confidence            5679999999999986   3679999999999999986433211                0 144568999999999999


Q ss_pred             HhhcCCCCC-ceEEEeccccCHHHHHHHH
Q 023244          245 FLLEYPDAK-GRYICSSHTLTIQEMAEFL  272 (285)
Q Consensus       245 ~~~~~~~~~-~~~~~~~~~~s~~e~~~~i  272 (285)
                      .+++++... .+|+++++..++.|+.+.-
T Consensus       183 ~~l~~~~~~g~~~~i~~g~~~~~e~~~~~  211 (219)
T 3dqp_A          183 ELVMTDHSIGKVISMHNGKTAIKEALESL  211 (219)
T ss_dssp             HHHTCGGGTTEEEEEEECSEEHHHHHHTT
T ss_pred             HHHhCccccCcEEEeCCCCccHHHHHHHH
Confidence            999987654 4788877779999988743

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=100.00  E-value=1.7e-33  Score=242.70  Aligned_cols=243  Identities=16%  Similarity=0.100  Sum_probs=186.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-----CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-----YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      +|+|||||||||||++|+++|+++|     ++|++++|+..        ... +     ...+++++.+|++|.+.+.++
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~--------~~~-~-----~~~~~~~~~~Dl~d~~~~~~~   66 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTR--------PAW-H-----EDNPINYVQCDISDPDDSQAK   66 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCC--------CSC-C-----CSSCCEEEECCTTSHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCC--------ccc-c-----ccCceEEEEeecCCHHHHHHH
Confidence            3689999999999999999999999     99999999872        111 1     123788999999999999999


Q ss_pred             hcC---CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEE-------EeccceeeeccCCCCccc
Q 023244           80 IAG---CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVV-------YTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        80 ~~~---~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v-------~~SS~~~~~~~~~~~~~~  147 (285)
                      +++   +|+|||+|+...   .++ ...+++|+.++.+++++|++.  + +++||       |+||.++|+.......++
T Consensus        67 ~~~~~~~d~vih~a~~~~---~~~-~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~  141 (364)
T 2v6g_A           67 LSPLTDVTHVFYVTWANR---STE-QENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPY  141 (364)
T ss_dssp             HTTCTTCCEEEECCCCCC---SSH-HHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSB
T ss_pred             HhcCCCCCEEEECCCCCc---chH-HHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCC
Confidence            988   999999999764   234 488999999999999999987  5 89998       799998775543334577


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC-CcEEEeccCceecCCCCCCCCccHHH-HHHHH---hcCc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG-LDLVTLIPSMVVGPFICPKFAGSVRS-SLALI---LGNR  222 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-i~~~i~Rp~~v~g~~~~~~~~~~~~~-~~~~~---~~~~  222 (285)
                      +|+++..        ++.+.|    ..+|.++.++++.++ ++++++||++||||+........... +...+   .+..
T Consensus       142 ~E~~~~~--------~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~  209 (364)
T 2v6g_A          142 TEDLPRL--------KYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKV  209 (364)
T ss_dssp             CTTSCCC--------SSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCC
T ss_pred             CccccCC--------ccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCc
Confidence            8887542        224567    357999988886677 99999999999999865432222222 12222   3443


Q ss_pred             ccccc-----ccCcceeeHHHHHHHHHHhhcCCCC-CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          223 EEYGF-----LLNTSMVHVDDVARAHIFLLEYPDA-KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       223 ~~~~~-----~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ..+..     ....++++++|+|++++.+++++.. +.+||+++ +.+|+.|+++.+++.+|.
T Consensus       210 ~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~  272 (364)
T 2v6g_A          210 LRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGV  272 (364)
T ss_dssp             BCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTC
T ss_pred             eecCCCcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCC
Confidence            33222     2347888999999999999987754 44898765 579999999999998875

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=100.00  E-value=3.5e-34  Score=232.55  Aligned_cols=214  Identities=21%  Similarity=0.215  Sum_probs=169.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCE-EEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL-RIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+||||||||+||++++++|+++|++|++++|++        +....+...     ++ +++.+|++  +.+.+.+++
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~--------~~~~~~~~~-----~~~~~~~~Dl~--~~~~~~~~~   84 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE--------EQGPELRER-----GASDIVVANLE--EDFSHAFAS   84 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHT-----TCSEEEECCTT--SCCGGGGTT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh--------HHHHHHHhC-----CCceEEEcccH--HHHHHHHcC
Confidence            568999999999999999999999999999999987        444444333     67 89999999  778888889


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|+|||+||....  .++ ...+++|+.++.++++++++.+ +++||++||......         +..+          
T Consensus        85 ~D~vi~~ag~~~~--~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~---------~~~~----------  141 (236)
T 3e8x_A           85 IDAVVFAAGSGPH--TGA-DKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVDP---------DQGP----------  141 (236)
T ss_dssp             CSEEEECCCCCTT--SCH-HHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSCG---------GGSC----------
T ss_pred             CCEEEECCCCCCC--CCc-cccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCCC---------CCCh----------
Confidence            9999999997654  344 5899999999999999999998 899999999654311         1111          


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA  242 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  242 (285)
                      .+...|+.+|.++|.+++    ..|++++++||+.++|+.........         .     .....+++++++|+|++
T Consensus       142 ~~~~~Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~~---------~-----~~~~~~~~i~~~Dva~~  203 (236)
T 3e8x_A          142 MNMRHYLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTVS---------P-----HFSEITRSITRHDVAKV  203 (236)
T ss_dssp             GGGHHHHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEEE---------S-----SCSCCCCCEEHHHHHHH
T ss_pred             hhhhhHHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEec---------c-----CCCcccCcEeHHHHHHH
Confidence            234679999999999875    57999999999999998643221100         0     11335689999999999


Q ss_pred             HHHhhcCCCCC-ceEEEeccccCHHHHHHHHH
Q 023244          243 HIFLLEYPDAK-GRYICSSHTLTIQEMAEFLS  273 (285)
Q Consensus       243 ~~~~~~~~~~~-~~~~~~~~~~s~~e~~~~i~  273 (285)
                      ++.+++++... ..|+++++..++.|+++.++
T Consensus       204 ~~~~~~~~~~~g~~~~v~~~~~~~~e~~~~i~  235 (236)
T 3e8x_A          204 IAELVDQQHTIGKTFEVLNGDTPIAKVVEQLG  235 (236)
T ss_dssp             HHHHTTCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred             HHHHhcCccccCCeEEEeCCCcCHHHHHHHhc
Confidence            99999987544 46888766899999998765

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=100.00  E-value=1.4e-33  Score=262.46  Aligned_cols=258  Identities=17%  Similarity=0.185  Sum_probs=191.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+|||||||||||++|+++|+++|++|++++|+..    ...+....+...  ...++.++.+|++|.+.+.++++  
T Consensus        10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~----~~~~~~~~l~~~--~~~~v~~v~~Dl~d~~~l~~~~~~~   83 (699)
T 1z45_A           10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSN----STYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEY   83 (699)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCc----chHHHHHHHhhc--cCCceEEEEcCCCCHHHHHHHHHhC
Confidence            4589999999999999999999999999999998761    000111111111  02367889999999999999998  


Q ss_pred             CCCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccC--CCCcccccCCCCchhh
Q 023244           82 GCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND--KDVDMMDETFWSDVDY  157 (285)
Q Consensus        82 ~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~--~~~~~~~e~~~~~~~~  157 (285)
                      ++|+|||+|+.....  ...+ ...+++|+.++.++++++++.+ +++||++||.++|+...  ....+++|+++.    
T Consensus        84 ~~D~Vih~A~~~~~~~~~~~~-~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~----  157 (699)
T 1z45_A           84 KIDSVIHFAGLKAVGESTQIP-LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPL----  157 (699)
T ss_dssp             CCCEEEECCSCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC----
T ss_pred             CCCEEEECCcccCcCccccCH-HHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccCCC----
Confidence            799999999976531  1233 4789999999999999999988 89999999998765432  122456666543    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHH--cCCcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcC--cccc
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGN--REEY  225 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~--~~~~  225 (285)
                           .+.+.|+.+|.++|.+++.++.+  .+++++++||+++|||.....        ...++..+.....+.  ...+
T Consensus       158 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (699)
T 1z45_A          158 -----GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYI  232 (699)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCC
T ss_pred             -----CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEE
Confidence                 34578999999999999998876  689999999999999864321        122344444444332  2222


Q ss_pred             --------ccccCcceeeHHHHHHHHHHhhcCC------C-CCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          226 --------GFLLNTSMVHVDDVARAHIFLLEYP------D-AKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 --------~~~~~~~~i~~~D~a~~~~~~~~~~------~-~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                              .....++|||++|+|++++.+++..      . .+++||++ ++.+|+.|+++.+++.+|.
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~  301 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI  301 (699)
T ss_dssp             C------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             eCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC
Confidence                    1245789999999999999998642      1 23578875 5689999999999998875

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=100.00  E-value=9.7e-34  Score=237.79  Aligned_cols=229  Identities=21%  Similarity=0.134  Sum_probs=168.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |||||||||||||++|+++|+++||+|++++|++.        .           ..   +.+|    +...+.++++|+
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~--------~-----------~~---~~~~----~~~~~~l~~~d~   54 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG--------P-----------GR---ITWD----ELAASGLPSCDA   54 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------T-----------TE---EEHH----HHHHHCCCSCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC--------c-----------Ce---eecc----hhhHhhccCCCE
Confidence            58999999999999999999999999999999871        0           01   1222    223344578999


Q ss_pred             EEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           86 VLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        86 vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      |||+|+..-..     .......+++.|+.+|.+|++++++.+ ..++||+.||..+|+..  ...+.+|+++.      
T Consensus        55 vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~--~~~~~~E~~p~------  126 (298)
T 4b4o_A           55 AVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPS--LTAEYDEDSPG------  126 (298)
T ss_dssp             EEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCC--SSCCBCTTCCC------
T ss_pred             EEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCC--CCCcccccCCc------
Confidence            99999853221     112234778899999999999998876 24568888988876443  45677787763      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCccccc-cccCcceeeHH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYG-FLLNTSMVHVD  237 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~i~~~  237 (285)
                         .+.+.|+..|...|....  ....+++++++||+.||||+.     ..+..+.. ...+....+. .+..++|||++
T Consensus       127 ---~~~~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~-----~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~  196 (298)
T 4b4o_A          127 ---GDFDFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGG-----GAMGHMLLPFRLGLGGPIGSGHQFFPWIHIG  196 (298)
T ss_dssp             ---SCSSHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTS-----HHHHHHHHHHHTTCCCCBTTSCSBCCEEEHH
T ss_pred             ---cccchhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCC-----CchhHHHHHHhcCCcceecccCceeecCcHH
Confidence               345668877777775432  234689999999999999863     12222222 2333333333 37789999999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|+++..+++++...|+||++ ++++|+.|+++.+++.+|+
T Consensus       197 Dva~a~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgr  238 (298)
T 4b4o_A          197 DLAGILTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGR  238 (298)
T ss_dssp             HHHHHHHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCc
Confidence            9999999999998888899865 5789999999999999886

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=100.00  E-value=2.8e-34  Score=237.37  Aligned_cols=221  Identities=18%  Similarity=0.162  Sum_probs=176.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||+|||||||||||++++++|+++|++|++++|++.        ..     .   ..++.++.+|++|.+.+.++++++|
T Consensus         2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~-----~---~~~~~~~~~Dl~d~~~~~~~~~~~d   65 (267)
T 3ay3_A            2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDL--------GA-----A---EAHEEIVACDLADAQAVHDLVKDCD   65 (267)
T ss_dssp             EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCC--------CC-----C---CTTEEECCCCTTCHHHHHHHHTTCS
T ss_pred             CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCc--------cc-----c---CCCccEEEccCCCHHHHHHHHcCCC
Confidence            578999999999999999999999999999999871        10     0   1267889999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+|+....  ..+ ...+++|+.++.++++++++.+ +++||++||..+++..+ ...+++|+++.         .+
T Consensus        66 ~vi~~a~~~~~--~~~-~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~-~~~~~~E~~~~---------~~  131 (267)
T 3ay3_A           66 GIIHLGGVSVE--RPW-NDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYP-RTTRIDTEVPR---------RP  131 (267)
T ss_dssp             EEEECCSCCSC--CCH-HHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSB-TTSCBCTTSCC---------CC
T ss_pred             EEEECCcCCCC--CCH-HHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCC-CCCCCCCCCCC---------CC
Confidence            99999997632  333 5889999999999999999888 89999999998775432 23567787753         35


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      .+.|+.+|.++|.+++.++++.+++++++||+++|+...                 .+     ...++|++++|+|++++
T Consensus       132 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~-----------------~~-----~~~~~~~~~~dva~~~~  189 (267)
T 3ay3_A          132 DSLYGLSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK-----------------DA-----RMMATWLSVDDFMRLMK  189 (267)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC-----------------SH-----HHHHHBCCHHHHHHHHH
T ss_pred             CChHHHHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC-----------------CC-----CeeeccccHHHHHHHHH
Confidence            578999999999999998877899999999999984210                 00     11347999999999999


Q ss_pred             HhhcCCCCC-ceEEE-eccccCHHHHHHHHHhhCCCC
Q 023244          245 FLLEYPDAK-GRYIC-SSHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       245 ~~~~~~~~~-~~~~~-~~~~~s~~e~~~~i~~~~~~~  279 (285)
                      .+++++... ++|++ ++...++.++.+.  +.+|..
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~lg~~  224 (267)
T 3ay3_A          190 RAFVAPKLGCTVVYGASANTESWWDNDKS--AFLGWV  224 (267)
T ss_dssp             HHHHSSCCCEEEEEECCSCSSCCBCCGGG--GGGCCC
T ss_pred             HHHhCCCCCceeEecCCCccccccCHHHH--HHcCCC
Confidence            999887553 45664 4456777777766  666643

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=100.00  E-value=1.8e-33  Score=243.06  Aligned_cols=211  Identities=18%  Similarity=0.180  Sum_probs=175.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |+|||||||||||++|+++|+++|+ +|++++|+                                +|.+++.++++++|
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------~d~~~l~~~~~~~d   48 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------TKEEELESALLKAD   48 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------CCHHHHHHHHHHCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------CCHHHHHHHhccCC
Confidence            5899999999999999999999998 77766552                                57788999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      +|||+|+.....  ++ ...++.|+.++.++++++++.+ ++ +|||+||..++.                         
T Consensus        49 ~Vih~a~~~~~~--~~-~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~-------------------------   99 (369)
T 3st7_A           49 FIVHLAGVNRPE--HD-KEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ-------------------------   99 (369)
T ss_dssp             EEEECCCSBCTT--CS-TTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS-------------------------
T ss_pred             EEEECCcCCCCC--CH-HHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC-------------------------
Confidence            999999986652  33 3677889999999999999988 66 999999998753                         


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc-cccc-cccCcceeeHHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR-EEYG-FLLNTSMVHVDDVAR  241 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~i~~~D~a~  241 (285)
                       .++|+.+|.++|.+++.++++.+++++++||+++|||+..+.....+..+........ ..+. .+..++|+|++|+|+
T Consensus       100 -~~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  178 (369)
T 3st7_A          100 -DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVA  178 (369)
T ss_dssp             -CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHH
T ss_pred             -CCCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHH
Confidence             2469999999999999999888999999999999999877665566666655444333 3332 366789999999999


Q ss_pred             HHHHhhcCCCC--CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDA--KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~--~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +++.+++++..  +++||+++ +.+|+.|+++.+++.+|.
T Consensus       179 ~~~~~l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~  218 (369)
T 3st7_A          179 EIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS  218 (369)
T ss_dssp             HHHHHHHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence            99999998876  57888664 689999999999987653

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=100.00  E-value=9.3e-33  Score=230.51  Aligned_cols=214  Identities=22%  Similarity=0.247  Sum_probs=168.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |+|||||||||||++++++|+++  |++|++++|++        .....+..     .+++++.+|++|++++.++++++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~--------~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNV--------EKASTLAD-----QGVEVRHGDYNQPESLQKAFAGV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCT--------TTTHHHHH-----TTCEEEECCTTCHHHHHHHTTTC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCH--------HHHhHHhh-----cCCeEEEeccCCHHHHHHHHhcC
Confidence            57999999999999999999998  99999999987        22222222     26789999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+|+.. .   .   .  ++|+.++.++++++++.+ +++|||+||..++. .                       
T Consensus        68 d~vi~~a~~~-~---~---~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~-~-----------------------  113 (287)
T 2jl1_A           68 SKLLFISGPH-Y---D---N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE-S-----------------------  113 (287)
T ss_dssp             SEEEECCCCC-S---C---H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGG-C-----------------------
T ss_pred             CEEEEcCCCC-c---C---c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC-C-----------------------
Confidence            9999999952 1   1   1  578999999999999988 89999999987531 0                       


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-cccCcceeeHHHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLLNTSMVHVDDVARA  242 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~  242 (285)
                       ..+|+.+|.++|.+++    ..+++++++||+.++|+...    ..+...   .......+. .+..++|+|++|+|++
T Consensus       114 -~~~y~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~~  181 (287)
T 2jl1_A          114 -IIPLAHVHLATEYAIR----TTNIPYTFLRNALYTDFFVN----EGLRAS---TESGAIVTNAGSGIVNSVTRNELALA  181 (287)
T ss_dssp             -CSTHHHHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS----GGGHHH---HHHTEEEESCTTCCBCCBCHHHHHHH
T ss_pred             -CCchHHHHHHHHHHHH----HcCCCeEEEECCEeccccch----hhHHHH---hhCCceeccCCCCccCccCHHHHHHH
Confidence             1259999999999885    36899999999998886421    122211   111222222 3667899999999999


Q ss_pred             HHHhhcCCCC-CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          243 HIFLLEYPDA-KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       243 ~~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ++.+++++.. +..||+++ +.+|+.|+++.+.+.+|.
T Consensus       182 ~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  219 (287)
T 2jl1_A          182 AATVLTEEGHENKTYNLVSNQPWTFDELAQILSEVSGK  219 (287)
T ss_dssp             HHHHHTSSSCTTEEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred             HHHHhcCCCCCCcEEEecCCCcCCHHHHHHHHHHHHCC
Confidence            9999987644 44788765 589999999999998875

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=100.00  E-value=3e-33  Score=251.35  Aligned_cols=233  Identities=16%  Similarity=0.113  Sum_probs=172.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|||||||||||++|+++|+++|++|++++|+..        ..             ..+.+|+.+.  +.+.++++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~--------~~-------------~~v~~d~~~~--~~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEP--------KP-------------GKRFWDPLNP--ASDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSC--------CT-------------TCEECCTTSC--CTTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC--------Cc-------------cceeecccch--hHHhcCCCC
Confidence            689999999999999999999999999999999871        10             1256777653  345667899


Q ss_pred             EEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHH-HHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           85 GVLHVATPVDFE--DKEPEEVITQRAINGTLGILKS-CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        85 ~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      +|||+|+.....  .......++++|+.++.+|+++ +++.+ +++|||+||.++|+.. ....+++|+++.        
T Consensus       204 ~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~-~~~~~~~E~~~~--------  273 (516)
T 3oh8_A          204 VLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHD-RGDEILTEESES--------  273 (516)
T ss_dssp             EEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSE-EEEEEECTTSCC--------
T ss_pred             EEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCC-CCCCccCCCCCC--------
Confidence            999999986431  1233358899999999999999 44455 8999999999977522 234567787752        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHh-cCccccc-cccCcceeeHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNREEYG-FLLNTSMVHVDDV  239 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~i~~~D~  239 (285)
                        +.+.|+.+|...|.++... ...|++++++||++||||+.     ..+..+..... +....+. .+..++|||++|+
T Consensus       274 --~~~~y~~~~~~~E~~~~~~-~~~gi~~~ilRp~~v~Gp~~-----~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dv  345 (516)
T 3oh8_A          274 --GDDFLAEVCRDWEHATAPA-SDAGKRVAFIRTGVALSGRG-----GMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDL  345 (516)
T ss_dssp             --CSSHHHHHHHHHHHTTHHH-HHTTCEEEEEEECEEEBTTB-----SHHHHHHHTTC---CCCCTTSCCEECEEEHHHH
T ss_pred             --CcChHHHHHHHHHHHHHHH-HhCCCCEEEEEeeEEECCCC-----ChHHHHHHHHHhCCCcccCCCCceEceEeHHHH
Confidence              4577999999999876554 46799999999999999872     23333332222 1122222 2567899999999


Q ss_pred             HHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          240 ARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |++++.+++++...|+||++ ++.+|+.|+++.+++.+|.
T Consensus       346 a~ai~~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~  385 (516)
T 3oh8_A          346 TDIYYRAIVDAQISGPINAVAPNPVSNADMTKILATSMHR  385 (516)
T ss_dssp             HHHHHHHHHCTTCCEEEEESCSCCEEHHHHHHHTTC----
T ss_pred             HHHHHHHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCC
Confidence            99999999988777888865 5789999999999998875

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=100.00  E-value=2.7e-32  Score=226.05  Aligned_cols=222  Identities=18%  Similarity=0.065  Sum_probs=174.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   83 (285)
                      |+|||||||||||++++++|++ |++|++++|+..        ..          .+   +.+|++|++++.+++++  +
T Consensus         1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~--------~~----------~~---~~~Dl~~~~~~~~~~~~~~~   58 (273)
T 2ggs_A            1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSE--------IQ----------GG---YKLDLTDFPRLEDFIIKKRP   58 (273)
T ss_dssp             CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSC--------CT----------TC---EECCTTSHHHHHHHHHHHCC
T ss_pred             CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCc--------CC----------CC---ceeccCCHHHHHHHHHhcCC
Confidence            4799999999999999999994 899999999871        10          12   78999999999999986  9


Q ss_pred             CEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+||.....  ..++ +..+++|+.++.++++++++.+ . +||++||..+|...   ..+++|+++.        
T Consensus        59 d~vi~~a~~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~---~~~~~e~~~~--------  124 (273)
T 2ggs_A           59 DVIINAAAMTDVDKCEIEK-EKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGE---KGNYKEEDIP--------  124 (273)
T ss_dssp             SEEEECCCCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSS---SCSBCTTSCC--------
T ss_pred             CEEEECCcccChhhhhhCH-HHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCC---CCCcCCCCCC--------
Confidence            9999999976531  2234 4889999999999999999887 5 99999999987543   2367777653        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       .+.+.|+.+|.++|.+++.      ++++++||+.+||+.      .....+... ..+.......+ .++|++++|+|
T Consensus       125 -~~~~~Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva  190 (273)
T 2ggs_A          125 -NPINYYGLSKLLGETFALQ------DDSLIIRTSGIFRNK------GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLA  190 (273)
T ss_dssp             -CCSSHHHHHHHHHHHHHCC------TTCEEEEECCCBSSS------SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHhC------CCeEEEecccccccc------HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHH
Confidence             3457899999999998865      678999999999831      233333222 23333222223 67899999999


Q ss_pred             HHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++++.+++++. .++||++++.+|+.|+++.+.+.+|.
T Consensus       191 ~~i~~~~~~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~  227 (273)
T 2ggs_A          191 SAILELLELRK-TGIIHVAGERISRFELALKIKEKFNL  227 (273)
T ss_dssp             HHHHHHHHHTC-CEEEECCCCCEEHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhcCc-CCeEEECCCcccHHHHHHHHHHHhCC
Confidence            99999998764 56898766889999999999999985

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=100.00  E-value=1.9e-32  Score=220.48  Aligned_cols=216  Identities=13%  Similarity=0.018  Sum_probs=158.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+||||||||+||++++++|+++|++|++++|++        +....+..     .+++++.+|++|.+.  +.++++|+
T Consensus         1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~~-----~~~~~~~~D~~d~~~--~~~~~~d~   65 (224)
T 3h2s_A            1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP--------QKAADRLG-----ATVATLVKEPLVLTE--ADLDSVDA   65 (224)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHTC-----TTSEEEECCGGGCCH--HHHTTCSE
T ss_pred             CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc--------cccccccC-----CCceEEecccccccH--hhcccCCE
Confidence            4799999999999999999999999999999987        33333322     378999999999988  77889999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC-CcccccCCCCchhhhhhcCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD-VDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      |||+|+.....      ...+.|+.+++++++++++.+  ++||++||.++++..... ..+.+|+.+.         .+
T Consensus        66 vi~~ag~~~~~------~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~---------~~  128 (224)
T 3h2s_A           66 VVDALSVPWGS------GRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESA---------AS  128 (224)
T ss_dssp             EEECCCCCTTS------SCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGG---------GG
T ss_pred             EEECCccCCCc------chhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCC---------cc
Confidence            99999986221      224679999999999999988  899999998766554322 1233333321         23


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      .+.|+.+|..+|.+ ..+.++.+++++++||+.+|||+....   ..       .+..........++|++++|+|++++
T Consensus       129 ~~~y~~sK~~~e~~-~~~~~~~~i~~~ivrp~~v~g~~~~~~---~~-------~~~~~~~~~~~~~~~i~~~DvA~~~~  197 (224)
T 3h2s_A          129 QPWYDGALYQYYEY-QFLQMNANVNWIGISPSEAFPSGPATS---YV-------AGKDTLLVGEDGQSHITTGNMALAIL  197 (224)
T ss_dssp             STTHHHHHHHHHHH-HHHTTCTTSCEEEEEECSBCCCCCCCC---EE-------EESSBCCCCTTSCCBCCHHHHHHHHH
T ss_pred             chhhHHHHHHHHHH-HHHHhcCCCcEEEEcCccccCCCcccC---ce-------ecccccccCCCCCceEeHHHHHHHHH
Confidence            56799999999954 455556799999999999999854322   10       11111111244578999999999999


Q ss_pred             HhhcCCCCC-ceEEEec-cccC
Q 023244          245 FLLEYPDAK-GRYICSS-HTLT  264 (285)
Q Consensus       245 ~~~~~~~~~-~~~~~~~-~~~s  264 (285)
                      .+++++... .+|++.+ +..+
T Consensus       198 ~~l~~~~~~g~~~~~~~~~~~~  219 (224)
T 3h2s_A          198 DQLEHPTAIRDRIVVRDADLEH  219 (224)
T ss_dssp             HHHHSCCCTTSEEEEEECC---
T ss_pred             HHhcCccccCCEEEEecCcchh
Confidence            999988764 4687665 3443

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=100.00  E-value=1.8e-32  Score=224.36  Aligned_cols=229  Identities=17%  Similarity=0.176  Sum_probs=170.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|+||||||+||++++++|+++  |++|++++|++        +....+      ..++.++.+|++|.+++.++++
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~--------~~~~~~------~~~~~~~~~D~~d~~~~~~~~~   68 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--------QGKEKI------GGEADVFIGDITDADSINPAFQ   68 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCH--------HHHHHT------TCCTTEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCC--------Cchhhc------CCCeeEEEecCCCHHHHHHHHc
Confidence            4689999999999999999999999  89999999976        222222      2367788999999999999999


Q ss_pred             CCCEEEEecccCCCC--------CCCh------HHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 GCTGVLHVATPVDFE--------DKEP------EEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ~~d~vih~a~~~~~~--------~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      ++|+|||+|+.....        ..++      ....+++|+.++.++++++++.+ +++||++||..++..        
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~~--------  139 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNP--------  139 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCT--------
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCCC--------
Confidence            999999999975320        0011      12467999999999999999988 899999999875311        


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                        ..+..     +  .....|+.+|..+|.+++    ..+++++++||+.+||+.....  ..+       .+....+. 
T Consensus       140 --~~~~~-----~--~~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~--~~~-------~~~~~~~~-  196 (253)
T 1xq6_A          140 --DHPLN-----K--LGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVR--ELL-------VGKDDELL-  196 (253)
T ss_dssp             --TCGGG-----G--GGGCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSS--CEE-------EESTTGGG-
T ss_pred             --CCccc-----c--ccchhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchh--hhh-------ccCCcCCc-
Confidence              11100     0  011348889999999875    3689999999999999864321  110       01111111 


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCC-CceEEEecc----ccCHHHHHHHHHhhCCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDA-KGRYICSSH----TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~-~~~~~~~~~----~~s~~e~~~~i~~~~~~  278 (285)
                      ....++++++|+|++++++++++.. +.+||++++    .+|+.|+++.+++.+|+
T Consensus       197 ~~~~~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~  252 (253)
T 1xq6_A          197 QTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  252 (253)
T ss_dssp             GSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred             CCCCcEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence            2235799999999999999987654 346886553    58999999999999886

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-33  Score=223.07  Aligned_cols=203  Identities=21%  Similarity=0.114  Sum_probs=156.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+.++|+|+||||||+||++++++|+++|+  +|++++|++.        .         ...+++++.+|++|.+++.+
T Consensus         1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~--------~---------~~~~~~~~~~D~~~~~~~~~   63 (215)
T 2a35_A            1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL--------A---------EHPRLDNPVGPLAELLPQLD   63 (215)
T ss_dssp             ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC--------C---------CCTTEECCBSCHHHHGGGCC
T ss_pred             CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCc--------c---------cCCCceEEeccccCHHHHHH
Confidence            655678999999999999999999999998  9999999872        1         12378888999999988887


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                      ++  +|+|||+|+.......++ +.++++|+.++.++++++++.+ +++||++||..++..                   
T Consensus        64 ~~--~d~vi~~a~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~-------------------  120 (215)
T 2a35_A           64 GS--IDTAFCCLGTTIKEAGSE-EAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK-------------------  120 (215)
T ss_dssp             SC--CSEEEECCCCCHHHHSSH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT-------------------
T ss_pred             hh--hcEEEECeeeccccCCCH-HHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCCC-------------------
Confidence            77  999999999765433344 4889999999999999999988 899999999886521                   


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCc-EEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHH
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLD-LVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVD  237 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~-~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  237 (285)
                           +.+.|+.+|.++|.+++.    .+++ ++++||+.+|||.....   ....+    .....++. ++.+++++++
T Consensus       121 -----~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~---~~~~~----~~~~~~~~-~~~~~~i~~~  183 (215)
T 2a35_A          121 -----SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFR---LAEIL----AAPIARIL-PGKYHGIEAC  183 (215)
T ss_dssp             -----CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEE---GGGGT----TCCCC-----CHHHHHHHH
T ss_pred             -----CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcch---HHHHH----HHhhhhcc-CCCcCcEeHH
Confidence                 235799999999998864    4899 99999999999975422   11110    11111111 2356899999


Q ss_pred             HHHHHHHHhhcCCCCCceEEEecc
Q 023244          238 DVARAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~~~~~~~~  261 (285)
                      |+|++++.+++++. ++.|+++++
T Consensus       184 Dva~~~~~~~~~~~-~~~~~i~~~  206 (215)
T 2a35_A          184 DLARALWRLALEEG-KGVRFVESD  206 (215)
T ss_dssp             HHHHHHHHHHTCCC-SEEEEEEHH
T ss_pred             HHHHHHHHHHhcCC-CCceEEcHH
Confidence            99999999999875 678887653

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.98  E-value=6.9e-31  Score=219.43  Aligned_cols=212  Identities=17%  Similarity=0.242  Sum_probs=161.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |+||||||||+||++++++|++. |++|++++|++        +....+..     .+++++.+|++|++++.++++++|
T Consensus         1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~--------~~~~~~~~-----~~v~~~~~D~~d~~~l~~~~~~~d   67 (289)
T 3e48_A            1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNV--------EKVPDDWR-----GKVSVRQLDYFNQESMVEAFKGMD   67 (289)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSG--------GGSCGGGB-----TTBEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCH--------HHHHHhhh-----CCCEEEEcCCCCHHHHHHHHhCCC
Confidence            47999999999999999999988 99999999987        22222222     378999999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+|+....         ...|+.++.+++++|++.+ +++|||+||...   .        +.              
T Consensus        68 ~vi~~a~~~~~---------~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~---~--------~~--------------  112 (289)
T 3e48_A           68 TVVFIPSIIHP---------SFKRIPEVENLVYAAKQSG-VAHIIFIGYYAD---Q--------HN--------------  112 (289)
T ss_dssp             EEEECCCCCCS---------HHHHHHHHHHHHHHHHHTT-CCEEEEEEESCC---S--------TT--------------
T ss_pred             EEEEeCCCCcc---------chhhHHHHHHHHHHHHHcC-CCEEEEEcccCC---C--------CC--------------
Confidence            99999986433         1347899999999999999 999999999542   1        00              


Q ss_pred             CchhHhhH--HHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-cccCcceeeHHHHHH
Q 023244          165 GKSYAISK--TLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLLNTSMVHVDDVAR  241 (285)
Q Consensus       165 ~~~Y~~sK--~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~  241 (285)
                       .+|..++  ..+|..+    +..|++++++||+.++|+.        ...+..........++ .+..++|++++|+|+
T Consensus       113 -~~~~~~~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~--------~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~  179 (289)
T 3e48_A          113 -NPFHMSPYFGYASRLL----STSGIDYTYVRMAMYMDPL--------KPYLPELMNMHKLIYPAGDGRINYITRNDIAR  179 (289)
T ss_dssp             -CCSTTHHHHHHHHHHH----HHHCCEEEEEEECEESTTH--------HHHHHHHHHHTEECCCCTTCEEEEECHHHHHH
T ss_pred             -CCCccchhHHHHHHHH----HHcCCCEEEEecccccccc--------HHHHHHHHHCCCEecCCCCceeeeEEHHHHHH
Confidence             1122223  2344433    3569999999999999973        1122222222222222 266788999999999


Q ss_pred             HHHHhhcCCCC-CceEEEeccccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDA-KGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~-~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++..++.++.. +.+|+++++.+|+.|+++.+.+.+|+
T Consensus       180 ~~~~~l~~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~  217 (289)
T 3e48_A          180 GVIAIIKNPDTWGKRYLLSGYSYDMKELAAILSEASGT  217 (289)
T ss_dssp             HHHHHHHCGGGTTCEEEECCEEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHcCCCcCCceEEeCCCcCCHHHHHHHHHHHHCC
Confidence            99999998765 45788777789999999999999886

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.98  E-value=2.6e-31  Score=213.26  Aligned_cols=215  Identities=13%  Similarity=0.136  Sum_probs=144.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+||||||||+||++++++|+++|++|++++|++        +....+.      .+++++.+|++|.+.  +.+.++|+
T Consensus         1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~--------~~~~~~~------~~~~~~~~D~~d~~~--~~~~~~d~   64 (221)
T 3ew7_A            1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA--------GKITQTH------KDINILQKDIFDLTL--SDLSDQNV   64 (221)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS--------HHHHHHC------SSSEEEECCGGGCCH--HHHTTCSE
T ss_pred             CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc--------hhhhhcc------CCCeEEeccccChhh--hhhcCCCE
Confidence            4799999999999999999999999999999987        3333332      378999999999987  77889999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      |||+|+....        ..+.|+.+++++++++++.+ ++++|++||..+++..... .+..|+.+.         .+.
T Consensus        65 vi~~ag~~~~--------~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~-~~~~~~~~~---------~~~  125 (221)
T 3ew7_A           65 VVDAYGISPD--------EAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDEDG-NTLLESKGL---------REA  125 (221)
T ss_dssp             EEECCCSSTT--------TTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-----------------------------C
T ss_pred             EEECCcCCcc--------ccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCCCC-ccccccCCC---------CCH
Confidence            9999997432        13458999999999999987 8999999999877654322 233343321         244


Q ss_pred             chhHhhHHHHHHHHHHHHH-HcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAE-EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~-~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      ..|+.+|..+|.+ ..+.. ..+++++++||+.+|||+....   ...     .......+. ....++++++|+|++++
T Consensus       126 ~~y~~~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~---~~~-----~~~~~~~~~-~~~~~~i~~~Dva~~~~  195 (221)
T 3ew7_A          126 PYYPTARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTG---DYQ-----IGKDHLLFG-SDGNSFISMEDYAIAVL  195 (221)
T ss_dssp             CCSCCHHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccC---ceE-----eccccceec-CCCCceEeHHHHHHHHH
Confidence            6799999999986 33333 5799999999999999843211   010     011111111 12237999999999999


Q ss_pred             HhhcCCCCCc-eEEEec-cccCH
Q 023244          245 FLLEYPDAKG-RYICSS-HTLTI  265 (285)
Q Consensus       245 ~~~~~~~~~~-~~~~~~-~~~s~  265 (285)
                      .+++++...+ .|++.+ ...+.
T Consensus       196 ~~l~~~~~~g~~~~~~~~~~~~~  218 (221)
T 3ew7_A          196 DEIERPNHLNEHFTVAGKLEHHH  218 (221)
T ss_dssp             HHHHSCSCTTSEEECCC------
T ss_pred             HHHhCccccCCEEEECCCCcccc
Confidence            9999887644 688665 44443

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.97  E-value=3.4e-31  Score=220.47  Aligned_cols=235  Identities=16%  Similarity=0.102  Sum_probs=167.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|++|||||+|+||++++++|+++|++|++++|+.        +....+ ...   ..++.++.+|++|.+++.++
T Consensus         1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~   69 (281)
T 3m1a_A            1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRT--------EALDDLVAAY---PDRAEAISLDVTDGERIDVV   69 (281)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHC---TTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc---cCCceEEEeeCCCHHHHHHH
Confidence            666789999999999999999999999999999999987        333222 222   24789999999999998888


Q ss_pred             hc-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+||....     ...+..+..+++|+.+    ++.+++.+++.+ .++||++||..++...   
T Consensus        70 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~---  145 (281)
T 3m1a_A           70 AADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSF---  145 (281)
T ss_dssp             HHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC---
T ss_pred             HHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCC---
Confidence            76       68999999997543     1122335789999999    555566666666 7899999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCC-------CCccHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK-------FAGSVRS  213 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~  213 (285)
                                         ++...|+.||.+.|.+++.++.+   +|++++++|||.+.+|.....       .......
T Consensus       146 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~  206 (281)
T 3m1a_A          146 -------------------AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEK  206 (281)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHH
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHH
Confidence                               34578999999999999999888   689999999999998753321       1111111


Q ss_pred             HHHH-HhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEecc-ccCHHHHHHHHHh
Q 023244          214 SLAL-ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH-TLTIQEMAEFLSA  274 (285)
Q Consensus       214 ~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~i~~  274 (285)
                      .... .....     ....++.+++|+|++++++++++..++.|+++++ ...+.+....+.+
T Consensus       207 ~~~~~~~~~~-----~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~  264 (281)
T 3m1a_A          207 VGPTRQLVQG-----SDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRA  264 (281)
T ss_dssp             HHHHHHHHHC----------CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHhh-----ccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHH
Confidence            1100 00001     1234789999999999999998877778887654 4445555554444

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.97  E-value=2.8e-31  Score=222.88  Aligned_cols=225  Identities=16%  Similarity=0.140  Sum_probs=170.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +|+|+||||||+||++++++|+++| ++|++++|++.     . .....+..     .+++++.+|++|++++.++++++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~-----~-~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPR-----K-KAAKELRL-----QGAEVVQGDQDDQVIMELALNGA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTT-----S-HHHHHHHH-----TTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCC-----C-HHHHHHHH-----CCCEEEEecCCCHHHHHHHHhcC
Confidence            5789999999999999999999998 99999999871     1 11122222     26889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+++....       ...+.|+.++.++++++++.+ +++||++||..++...        +.            .
T Consensus        74 d~vi~~a~~~~~-------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~--------~~------------~  125 (299)
T 2wm3_A           74 YATFIVTNYWES-------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT--------AG------------R  125 (299)
T ss_dssp             SEEEECCCHHHH-------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHT--------TT------------S
T ss_pred             CEEEEeCCCCcc-------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccC--------CC------------c
Confidence            999999985321       123567889999999999998 9999998876644221        10            1


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc--cccc-cccCcceeeHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR--EEYG-FLLNTSMVHVDDVA  240 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~i~~~D~a  240 (285)
                      +..+|+.+|..+|.+++.    .|++++++||+.+||+..........      ..+..  ..++ .+..++|++++|+|
T Consensus       126 ~~~~y~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~i~~~Dva  195 (299)
T 2wm3_A          126 LAAAHFDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQKA------PDGKSYLLSLPTGDVPMDGMSVSDLG  195 (299)
T ss_dssp             CCCHHHHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCEEC------TTSSSEEECCCCTTSCEEEECGGGHH
T ss_pred             ccCchhhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCccc------CCCCEEEEEecCCCCccceecHHHHH
Confidence            235699999999998864    48999999999999975331111100      01111  1122 35678999999999


Q ss_pred             HHHHHhhcCCC--CCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPD--AKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~--~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++..++.++.  .+..|+++++.+|+.|+++.+.+.+|+
T Consensus       196 ~~~~~~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~  235 (299)
T 2wm3_A          196 PVVLSLLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK  235 (299)
T ss_dssp             HHHHHHHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred             HHHHHHHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence            99999998752  345788877889999999999998885

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.97  E-value=4.6e-31  Score=220.09  Aligned_cols=210  Identities=17%  Similarity=0.162  Sum_probs=160.8

Q ss_pred             eEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|||||||||||++++++|+++  |++|++++|++        +....+..     .+++++.+|++|++++.++++++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~--------~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNP--------AKAQALAA-----QGITVRQADYGDEAALTSALQGVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCT--------TTCHHHHH-----TTCEEEECCTTCHHHHHHHTTTCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcCh--------Hhhhhhhc-----CCCeEEEcCCCCHHHHHHHHhCCC
Confidence            5899999999999999999998  99999999987        22222222     267889999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||+|+...           ..|+.++.++++++++.+ +++||++||..++  .          .             
T Consensus        68 ~vi~~a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~--~----------~-------------  110 (286)
T 2zcu_A           68 KLLLISSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHAD--T----------S-------------  110 (286)
T ss_dssp             EEEECC-------------------CHHHHHHHHHHHHT-CCEEEEEEETTTT--T----------C-------------
T ss_pred             EEEEeCCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCC--C----------C-------------
Confidence            9999998521           147889999999999998 8999999998764  1          0             


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc-cccCcceeeHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG-FLLNTSMVHVDDVARAH  243 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~D~a~~~  243 (285)
                      ..+|+.+|..+|.+++.    .+++++++||+.++++..     ..+.   .........+. .+..++|+|++|+|+++
T Consensus       111 ~~~y~~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~-----~~~~---~~~~~~~~~~~~~~~~~~~i~~~Dva~~~  178 (286)
T 2zcu_A          111 PLGLADEHIETEKMLAD----SGIVYTLLRNGWYSENYL-----ASAP---AALEHGVFIGAAGDGKIASATRADYAAAA  178 (286)
T ss_dssp             CSTTHHHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----TTHH---HHHHHTEEEESCTTCCBCCBCHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----HHhH---HhhcCCceeccCCCCccccccHHHHHHHH
Confidence            13599999999998854    589999999988766531     1121   11222222222 25678999999999999


Q ss_pred             HHhhcCCCC-CceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          244 IFLLEYPDA-KGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       244 ~~~~~~~~~-~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +.++.++.. ++.||+++ +.+|+.|+++.+.+.+|.
T Consensus       179 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~  215 (286)
T 2zcu_A          179 ARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGK  215 (286)
T ss_dssp             HHHHHSSSCTTCEEEECCSSCBCHHHHHHHHHHHHSS
T ss_pred             HHHhcCCCCCCceEEEeCCCcCCHHHHHHHHHHHHCC
Confidence            999987643 45788766 489999999999998875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.97  E-value=5.7e-30  Score=212.70  Aligned_cols=237  Identities=14%  Similarity=0.174  Sum_probs=172.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+||||||+|+||++++++|+++|++|++++|+.        +....+ .++. ...++.++.+|++|.+++.++++ 
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD--------DHGQKVCNNIG-SPDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh--------hHHHHHHHHhC-CCCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999875        222211 1221 12378999999999999888876 


Q ss_pred             ------CCCEEEEecccCCC-----C--CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF-----E--DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~--~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||....     .  ..+..+..+++|+.++.++++++.+.    + .++||++||..++...+   
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~---  161 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE---  161 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT---
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCC---
Confidence                  68999999997542     1  11233578999999999999887653    4 67999999988654321   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .+...|+.||.+.|.+++.++.+   .|++++++|||.++|+....................
T Consensus       162 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  223 (278)
T 2bgk_A          162 ------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA  223 (278)
T ss_dssp             ------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT
T ss_pred             ------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcc
Confidence                              13457999999999999998876   489999999999999865432221111111111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEec-cccCHHHHHHHHHhhC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSS-HTLTIQEMAEFLSAKY  276 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~-~~~s~~e~~~~i~~~~  276 (285)
                      +.+     ...+++++|+|+++++++....  ..| .+++++ ..+++.|+++.+.+.+
T Consensus       224 ~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~  277 (278)
T 2bgk_A          224 ANL-----KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL  277 (278)
T ss_dssp             CSS-----CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred             ccc-----ccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence            111     2368999999999999996532  234 567765 5789999999887643

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.97  E-value=3e-30  Score=210.04  Aligned_cols=208  Identities=16%  Similarity=0.093  Sum_probs=158.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|+||||||+||++++++|+++|+  +|++++|++.        ......     ..++.++.+|++|.+++.++++
T Consensus        17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~--------~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~   83 (242)
T 2bka_A           17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL--------TFDEEA-----YKNVNQEVVDFEKLDDYASAFQ   83 (242)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC--------CCCSGG-----GGGCEEEECCGGGGGGGGGGGS
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCC--------Cccccc-----cCCceEEecCcCCHHHHHHHhc
Confidence            357999999999999999999999999  9999999872        111111     1267889999999999999999


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+|||+||.....  ...+.++++|+.++.++++++++.+ +++||++||.+++..                      
T Consensus        84 ~~d~vi~~ag~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~----------------------  138 (242)
T 2bka_A           84 GHDVGFCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADKS----------------------  138 (242)
T ss_dssp             SCSEEEECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------------
T ss_pred             CCCEEEECCCccccc--CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCCC----------------------
Confidence            999999999975432  1235788999999999999999888 899999999876521                      


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCC-cEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i-~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                        +..+|+.+|...|.+++.    .++ +++++|||.++||.....   ....+........+..  .....+++++|+|
T Consensus       139 --~~~~Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~dva  207 (242)
T 2bka_A          139 --SNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLPDS--WASGHSVPVVTVV  207 (242)
T ss_dssp             --CSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCCTT--GGGGTEEEHHHHH
T ss_pred             --CcchHHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCc---HHHHHHHHhhcccCcc--ccCCcccCHHHHH
Confidence              125699999999998754    478 699999999999964321   1222222222221111  1123699999999


Q ss_pred             HHHHHhhcCCCCCceEEEec
Q 023244          241 RAHIFLLEYPDAKGRYICSS  260 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~  260 (285)
                      +++++++.++...+.+++++
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~  227 (242)
T 2bka_A          208 RAMLNNVVRPRDKQMELLEN  227 (242)
T ss_dssp             HHHHHHHTSCCCSSEEEEEH
T ss_pred             HHHHHHHhCccccCeeEeeH
Confidence            99999999887777777654

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.97  E-value=8.1e-31  Score=224.67  Aligned_cols=230  Identities=16%  Similarity=0.123  Sum_probs=167.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecC-CCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD-LSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~~~~~   79 (285)
                      |++++|+|+|||||||||++++++|+++|++|++++|+..     .. ....+...    .+++++.+| ++|++++.++
T Consensus         1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~-----~~-~~~~l~~~----~~v~~v~~D~l~d~~~l~~~   70 (352)
T 1xgk_A            1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLK-----GL-IAEELQAI----PNVTLFQGPLLNNVPLMDTL   70 (352)
T ss_dssp             --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSC-----SH-HHHHHHTS----TTEEEEESCCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCC-----hh-hHHHHhhc----CCcEEEECCccCCHHHHHHH
Confidence            6544689999999999999999999999999999999871     10 11222221    368899999 9999999999


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      ++++|+|||+++....          +.|..+ +++++++++.+++++|||+||.....+.        +          
T Consensus        71 ~~~~d~Vi~~a~~~~~----------~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~--------~----------  121 (352)
T 1xgk_A           71 FEGAHLAFINTTSQAG----------DEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG--------P----------  121 (352)
T ss_dssp             HTTCSEEEECCCSTTS----------CHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS--------S----------
T ss_pred             HhcCCEEEEcCCCCCc----------HHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC--------C----------
Confidence            9999999999875321          235666 8999999987657899999997621011        0          


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc---ccccccCcceeeH
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE---EYGFLLNTSMVHV  236 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~  236 (285)
                         .+..+|+.+|..+|.+++.    .+++++++||+ +||++........+... ....+...   +...++.++|+|+
T Consensus       122 ---~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~i~v  192 (352)
T 1xgk_A          122 ---WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQME-LMPDGTFEWHAPFDPDIPLPWLDA  192 (352)
T ss_dssp             ---CCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCBEE-ECTTSCEEEEESSCTTSCEEEECH
T ss_pred             ---CCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhccccccccc-ccCCCceEEeeccCCCCceeeEec
Confidence               1235699999999999865    48999999987 68876543211111000 00011110   1113667899999


Q ss_pred             -HHHHHHHHHhhcCCC---CCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          237 -DDVARAHIFLLEYPD---AKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       237 -~D~a~~~~~~~~~~~---~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                       +|+|++++.+++++.   .+++|+++++.+|+.|+++.+.+.+|+
T Consensus       193 ~~Dva~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~  238 (352)
T 1xgk_A          193 EHDVGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  238 (352)
T ss_dssp             HHHHHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence             999999999998652   356899888889999999999998875

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.97  E-value=1.3e-30  Score=223.24  Aligned_cols=227  Identities=16%  Similarity=0.138  Sum_probs=166.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      +|+||||||||+||++|+++|++.|++|++++|++.    ...++...+..+.  ..+++++.+|++|.+++.++++  +
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~----~~~~~~~~~~~l~--~~~v~~~~~Dl~d~~~l~~~~~~~~   83 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGP----RSPSKAKIFKALE--DKGAIIVYGLINEQEAMEKILKEHE   83 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSC----CCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHHHTT
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCC----CChhHHHHHHHHH--hCCcEEEEeecCCHHHHHHHHhhCC
Confidence            468999999999999999999999999999999761    1111222111110  1378999999999999999999  9


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|+|||+|+..              |+.++.+++++|++.+.+++||+ |+   ++.      ..+|.++.         
T Consensus        84 ~d~Vi~~a~~~--------------n~~~~~~l~~aa~~~g~v~~~v~-S~---~g~------~~~e~~~~---------  130 (346)
T 3i6i_A           84 IDIVVSTVGGE--------------SILDQIALVKAMKAVGTIKRFLP-SE---FGH------DVNRADPV---------  130 (346)
T ss_dssp             CCEEEECCCGG--------------GGGGHHHHHHHHHHHCCCSEEEC-SC---CSS------CTTTCCCC---------
T ss_pred             CCEEEECCchh--------------hHHHHHHHHHHHHHcCCceEEee-cc---cCC------CCCccCcC---------
Confidence            99999999962              67788999999999887889986 43   221      23343332         


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cccCcceeeHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLLNTSMVHVDDVA  240 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a  240 (285)
                      .+...|+.+|+.+|.++++    .|++++++|||.++|......    ..............+.  .+..++|++++|+|
T Consensus       131 ~p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~----~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva  202 (346)
T 3i6i_A          131 EPGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNN----IHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIG  202 (346)
T ss_dssp             TTHHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC---------CCCCSSCEEEETTSCCCEEEECHHHHH
T ss_pred             CCcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCccc----cccccccCCCceEEEccCCCceEEecCHHHHH
Confidence            3456899999999998864    689999999999999653221    1110000012222222  25578999999999


Q ss_pred             HHHHHhhcCCCC-CceEEEe--ccccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPDA-KGRYICS--SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~~-~~~~~~~--~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++++.++.++.. ++.|++.  ++.+|+.|+++.+++.+|+
T Consensus       203 ~~~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~  243 (346)
T 3i6i_A          203 KFTMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR  243 (346)
T ss_dssp             HHHHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS
T ss_pred             HHHHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC
Confidence            999999998765 4456654  4789999999999999886

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.97  E-value=5.1e-29  Score=197.66  Aligned_cols=199  Identities=18%  Similarity=0.227  Sum_probs=150.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|+||||||+||++++++|+++|++|++++|++        +....+     ...+++++.+|++|++++.++++++|+
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~--------~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~d~   70 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS--------SRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQDA   70 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG--------GGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh--------hhcccc-----cCCceEEEEecCCCHHHHHHHHcCCCE
Confidence            7999999999999999999999999999999986        111111     124788999999999999999999999


Q ss_pred             EEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC
Q 023244           86 VLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG  165 (285)
Q Consensus        86 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  165 (285)
                      |||+|+.....  ++    .++|+.++.++++++++.+ +++||++||..++.....        .+          .+.
T Consensus        71 vi~~a~~~~~~--~~----~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~~~--------~~----------~~~  125 (206)
T 1hdo_A           71 VIVLLGTRNDL--SP----TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK--------VP----------PRL  125 (206)
T ss_dssp             EEECCCCTTCC--SC----CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC--------SC----------GGG
T ss_pred             EEECccCCCCC--Cc----cchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCccc--------cc----------ccc
Confidence            99999976541  22    2478999999999999988 899999999976533211        00          034


Q ss_pred             chhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCC-CCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          166 KSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC-PKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       166 ~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      ..|+.+|..+|.+++    ..+++++++||+.++ +... .......        ...   +   ..+|++++|+|++++
T Consensus       126 ~~y~~~K~~~e~~~~----~~~i~~~~lrp~~~~-~~~~~~~~~~~~--------~~~---~---~~~~i~~~Dva~~~~  186 (206)
T 1hdo_A          126 QAVTDDHIRMHKVLR----ESGLKYVAVMPPHIG-DQPLTGAYTVTL--------DGR---G---PSRVISKHDLGHFML  186 (206)
T ss_dssp             HHHHHHHHHHHHHHH----HTCSEEEEECCSEEE-CCCCCSCCEEES--------SSC---S---SCSEEEHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHH----hCCCCEEEEeCCccc-CCCCCcceEecc--------cCC---C---CCCccCHHHHHHHHH
Confidence            679999999999884    468999999999983 3221 1110000        000   0   048999999999999


Q ss_pred             HhhcCCCCCc-eEEEecc
Q 023244          245 FLLEYPDAKG-RYICSSH  261 (285)
Q Consensus       245 ~~~~~~~~~~-~~~~~~~  261 (285)
                      .+++++...| .|+++++
T Consensus       187 ~~~~~~~~~g~~~~i~~g  204 (206)
T 1hdo_A          187 RCLTTDEYDGHSTYPSHQ  204 (206)
T ss_dssp             HTTSCSTTTTCEEEEECC
T ss_pred             HHhcCccccccceeeecc
Confidence            9999876544 6777654

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=7.5e-29  Score=203.35  Aligned_cols=221  Identities=13%  Similarity=0.067  Sum_probs=160.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|+++++++++ 
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   81 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA--------DAANHVVDEIQQLGGQAFACRCDITSEQELSALADF   81 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22211 11111113478899999999999988876 


Q ss_pred             ------CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            ++|+|||+||.....    ..+..+..+++|+.++.++++++.    +.+ .++||++||..++...       
T Consensus        82 ~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-------  153 (255)
T 1fmc_A           82 AISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN-------  153 (255)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC-------
T ss_pred             HHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCC-------
Confidence                  789999999976531    112235889999999999888875    445 6899999998765322       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.|.+++.++.++   +++++++|||.++++.......   .......... .+
T Consensus       154 ---------------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~-~~  214 (255)
T 1fmc_A          154 ---------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVIT---PEIEQKMLQH-TP  214 (255)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCC---HHHHHHHHHT-CS
T ss_pred             ---------------CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccC---hHHHHHHHhc-CC
Confidence                           244679999999999999988775   8999999999999975322111   1111111111 12


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc-ccC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD---AKGRYICSSH-TLT  264 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~-~~s  264 (285)
                      +     ..+++++|+|+++++++....   .+..|+++++ .+|
T Consensus       215 ~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s  253 (255)
T 1fmc_A          215 I-----RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQE  253 (255)
T ss_dssp             S-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred             c-----ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceecc
Confidence            2     268999999999999997542   2346777654 454

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.96  E-value=2.8e-28  Score=202.47  Aligned_cols=235  Identities=17%  Similarity=0.161  Sum_probs=156.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcC---CCCCCCEEEEecCCCChhhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNL---PGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++   ...+.++.++.+|++|.++++++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHA--------ERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI   76 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHH
Confidence            468899999999999999999999999999999976        222211 111   12234788999999999998888


Q ss_pred             hc-------CCCEEEEecccCCCC---------CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEecccee-ee
Q 023244           80 IA-------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAA-VF  138 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~-~~  138 (285)
                      ++       .+|+|||+||.....         ..+..+..+++|+.++.++++++.+.    +  ++||++||..+ +.
T Consensus        77 ~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~  154 (278)
T 1spx_A           77 LSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLH  154 (278)
T ss_dssp             HHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSS
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEeccccccc
Confidence            87       689999999975431         22233578999999999999887654    4  79999999875 32


Q ss_pred             ccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC---Ccc--
Q 023244          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF---AGS--  210 (285)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~---~~~--  210 (285)
                      ..                      ++...|+.||.+.+.+.+.++.+   .|++++++|||.++++......   ...  
T Consensus       155 ~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~  212 (278)
T 1spx_A          155 AT----------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKK  212 (278)
T ss_dssp             CC----------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC-------------
T ss_pred             CC----------------------CCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhh
Confidence            22                      23457999999999999988876   4899999999999998533210   001  


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC---CCc-eEEEec-cccCHHHHHHHHHhhC
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKG-RYICSS-HTLTIQEMAEFLSAKY  276 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~-~~~~~~-~~~s~~e~~~~i~~~~  276 (285)
                      .......... ..+     ...+++++|+|+++++++..+.   ..| .+++++ ..+++.++++.+.+.+
T Consensus       213 ~~~~~~~~~~-~~p-----~~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~  277 (278)
T 1spx_A          213 FYSTMATMKE-CVP-----AGVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL  277 (278)
T ss_dssp             -HHHHHHHHH-HCT-----TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred             hhHHHHHHHh-cCC-----CcCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence            0000111111 111     1268999999999999997532   234 566665 4789999999887653

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.2e-27  Score=196.60  Aligned_cols=209  Identities=17%  Similarity=0.158  Sum_probs=158.4

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+..        ..        ...++.++.+|++|+++++++++ 
T Consensus        26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--------~~--------~~~~~~~~~~Dv~d~~~v~~~~~~   89 (260)
T 3un1_A           26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK--------PS--------ADPDIHTVAGDISKPETADRIVRE   89 (260)
T ss_dssp             TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC--------CC--------SSTTEEEEESCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh--------hc--------ccCceEEEEccCCCHHHHHHHHHH
Confidence            35689999999999999999999999999999999871        11        11268899999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .+++|++||..++....     
T Consensus        90 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~-----  163 (260)
T 3un1_A           90 GIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMV-----  163 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBT-----
T ss_pred             HHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCC-----
Confidence                  689999999976431     12233588999999999999887    4455 68999999976532210     


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     ..+...|+.||.+.+.+.+.++.++   |+++++++||.+++|.....   ..    .... ...
T Consensus       164 ---------------~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~----~~~~-~~~  220 (260)
T 3un1_A          164 ---------------GMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---TH----STLA-GLH  220 (260)
T ss_dssp             ---------------TCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---GH----HHHH-TTS
T ss_pred             ---------------CCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---HH----HHHh-ccC
Confidence                           1234679999999999999999887   89999999999999864321   11    1111 112


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  261 (285)
                      +     ...+.+++|+|++++++.+.....| .++++++
T Consensus       221 p-----~~r~~~~~dva~av~~L~~~~~itG~~i~vdGG  254 (260)
T 3un1_A          221 P-----VGRMGEIRDVVDAVLYLEHAGFITGEILHVDGG  254 (260)
T ss_dssp             T-----TSSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             C-----CCCCcCHHHHHHHHHHhcccCCCCCcEEEECCC
Confidence            2     2378999999999999966554445 5677664

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.96  E-value=9.7e-29  Score=207.71  Aligned_cols=236  Identities=15%  Similarity=0.094  Sum_probs=166.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCC-CCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGA-SERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +.... ..++... +.++.++.+|++|.+++.++++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   96 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM--------DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   96 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHH
Confidence            458999999999999999999999999999999976        22211 1111000 2378999999999998888876


Q ss_pred             C-------CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 G-------CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ~-------~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      .       +|+|||+||....     ...+..+..+++|+.++.++++++.+    ....++||++||..++.+.     
T Consensus        97 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  171 (302)
T 1w6u_A           97 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----  171 (302)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCC-----
Confidence            4       5999999997543     11223358899999999999887753    2225799999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC-CccHHHHHHHHhcC
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-AGSVRSSLALILGN  221 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~~~~~~  221 (285)
                                       ++...|+.||.+.|.+++.++.+   .|++++++|||.++++...... .....  ...... 
T Consensus       172 -----------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~-  231 (302)
T 1w6u_A          172 -----------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF--EKEMIG-  231 (302)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH--HHHHHT-
T ss_pred             -----------------CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhh--HHHHHh-
Confidence                             34467999999999999999877   6899999999999998432221 11111  111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc-ccCHHHHHHHHHhhCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH-TLTIQEMAEFLSAKYP  277 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~-~~s~~e~~~~i~~~~~  277 (285)
                      ..+.     ..+++++|+|+++++++.....  .| .++++++ .+++.++++.+.+..+
T Consensus       232 ~~p~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g  286 (302)
T 1w6u_A          232 RIPC-----GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK  286 (302)
T ss_dssp             TCTT-----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred             cCCc-----CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence            1122     2689999999999999975432  34 5777654 6777777776665543

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=99.96  E-value=2e-28  Score=199.77  Aligned_cols=218  Identities=14%  Similarity=0.163  Sum_probs=160.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   75 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSK-------EKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKE   75 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999888541       11111 11111123478899999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.      
T Consensus        76 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  148 (246)
T 3osu_A           76 VVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGN------  148 (246)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCC------
Confidence                  689999999986431     12223578999999999999988    4455 6799999998765433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++......    ........ ...
T Consensus       149 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~-~~~  207 (246)
T 3osu_A          149 ----------------PGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALS----DELKEQML-TQI  207 (246)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSC----HHHHHHHH-TTC
T ss_pred             ----------------CCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccC----HHHHHHHH-hcC
Confidence                            34567999999999999988875   4899999999999998643321    12222222 122


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ++     ..+.+++|+|+++++++.....  .| .++++++
T Consensus       208 p~-----~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG  243 (246)
T 3osu_A          208 PL-----ARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG  243 (246)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            22     3689999999999999975433  24 5677664

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.96  E-value=3.4e-28  Score=200.05  Aligned_cols=222  Identities=15%  Similarity=0.102  Sum_probs=158.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   83 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDE--------AMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            468899999999999999999999999999999976        22111 11111113478999999999999888876 


Q ss_pred             ------CCCEEEEecccCC-C---C--CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVD-F---E--DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~-~---~--~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||... .   .  ..+.....+++|+.++.++++++.+    .+ .++||++||..++...+    
T Consensus        84 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~----  158 (260)
T 3awd_A           84 VHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNR----  158 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCC----
Confidence                  5899999999754 2   1  1122357899999999999988764    34 68999999987543221    


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      ..+...|+.||.+.|.+++.++.+   .|++++++|||.+++|........  .......... 
T Consensus       159 ----------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~-  219 (260)
T 3awd_A          159 ----------------PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK--PELYDAWIAG-  219 (260)
T ss_dssp             ----------------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC--HHHHHHHHHT-
T ss_pred             ----------------CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC--hHHHHHHHhc-
Confidence                            012367999999999999999877   689999999999999864311100  1111111111 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSHT  262 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~~  262 (285)
                      .+.     ..+++++|+|+++.+++....  ..| .++++++.
T Consensus       220 ~~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  257 (260)
T 3awd_A          220 TPM-----GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAGF  257 (260)
T ss_dssp             CTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred             CCc-----CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCce
Confidence            122     268999999999999997532  234 57777653

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=99.96  E-value=1.2e-28  Score=204.93  Aligned_cols=245  Identities=20%  Similarity=0.208  Sum_probs=172.7

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+..    ...+....+........++.++.+|++|.++++++++ 
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   84 (281)
T 3svt_A            9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPD----KLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDA   84 (281)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHH
Confidence            35689999999999999999999999999999999761    0011122233222223378899999999998888876 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++.+.   +..++||++||..++...      
T Consensus        85 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  158 (281)
T 3svt_A           85 VTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH------  158 (281)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC------
Confidence                  47999999997322      112223588999999999999887543   114699999998865333      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.++   |+++++++||.++++........ .........  ..
T Consensus       159 ----------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~--~~  219 (281)
T 3svt_A          159 ----------------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITES-AELSSDYAM--CT  219 (281)
T ss_dssp             ----------------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTC-HHHHHHHHH--HC
T ss_pred             ----------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccC-HHHHHHHHh--cC
Confidence                            334679999999999999998775   69999999999998753211000 001111111  11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc-ccC-HHHHHHHHHhhCCCCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH-TLT-IQEMAEFLSAKYPEYPI  281 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~-~~s-~~e~~~~i~~~~~~~~~  281 (285)
                      +     ...+.+++|+|+++++++.....  .| .++++++ ..+ ..++.+.+.+.++....
T Consensus       220 p-----~~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~  277 (281)
T 3svt_A          220 P-----LPRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDAL  277 (281)
T ss_dssp             S-----SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTGG
T ss_pred             C-----CCCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCccc
Confidence            2     23688999999999999975432  34 5677654 444 67888888888776443

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.96  E-value=6.1e-28  Score=196.66  Aligned_cols=216  Identities=20%  Similarity=0.168  Sum_probs=157.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +....+. +.    .+++++.+|++|.++++++++.
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   73 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN--------SDLVSLAKEC----PGIEPVCVDLGDWDATEKALGG   73 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHTT
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhc----cCCCcEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        2222222 22    2567789999999999999874


Q ss_pred             ---CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcccccC
Q 023244           83 ---CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        83 ---~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                         +|+|||+||.....     ..+..+..+++|+.++.++++++.+.    +..++||++||..++...          
T Consensus        74 ~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----------  143 (244)
T 1cyd_A           74 IGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF----------  143 (244)
T ss_dssp             CCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----------
T ss_pred             cCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC----------
Confidence               79999999975431     12233578999999999998887653    224799999998765332          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  ++...|+.||.+.|.+++.++++   .+++++++|||.++|+........ .........+.  +   
T Consensus       144 ------------~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~--~---  205 (244)
T 1cyd_A          144 ------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD-PEFARKLKERH--P---  205 (244)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC-HHHHHHHHHHS--T---
T ss_pred             ------------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccC-HHHHHHHHhcC--C---
Confidence                        23467999999999999998877   489999999999999743211110 01111111111  1   


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                        .++|++++|+|+++++++..+..  .| .+++.++
T Consensus       206 --~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 1cyd_A          206 --LRKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  240 (244)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             --ccCCCCHHHHHHHHHHHhCchhhcccCCEEEECCC
Confidence              24899999999999999976432  34 4566554

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=99.96  E-value=6.4e-28  Score=198.26  Aligned_cols=220  Identities=18%  Similarity=0.172  Sum_probs=159.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++   ..++.++.+|++|.++++++++ 
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~   75 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDI--------ERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAA   75 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHH
Confidence            458899999999999999999999999999999976        22222 2222   2368899999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.    +..++||++||..++.+.      
T Consensus        76 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  149 (259)
T 4e6p_A           76 TVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE------  149 (259)
T ss_dssp             HHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC------
Confidence                  689999999985431     12233588999999999999887543    223699999998865433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC--
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN--  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~--  221 (285)
                                      ++...|+.||.+.+.+.+.++.++   |+++++++||.+++|....     ...........  
T Consensus       150 ----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~-----~~~~~~~~~~~~~  208 (259)
T 4e6p_A          150 ----------------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDG-----VDALFARYENRPR  208 (259)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHH-----HHHHHHHHHTCCT
T ss_pred             ----------------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhh-----hhhhhhhhccCCh
Confidence                            334679999999999999998775   8999999999999985221     00000000000  


Q ss_pred             ccc---cc-cccCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 023244          222 REE---YG-FLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSSH  261 (285)
Q Consensus       222 ~~~---~~-~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~~  261 (285)
                      ...   +. .....++.+++|+|+++++++.....   +..++++++
T Consensus       209 ~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG  255 (259)
T 4e6p_A          209 GEKKRLVGEAVPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDGG  255 (259)
T ss_dssp             THHHHHHHHHSTTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             HHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECcC
Confidence            000   00 02245799999999999999965432   345777664

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=99.96  E-value=1.2e-27  Score=197.88  Aligned_cols=215  Identities=19%  Similarity=0.127  Sum_probs=160.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +.... ..+.   +.++.++.+|++|.++++++++ 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   78 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPE--------TDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDF   78 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT--------SCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999987        22222 2222   3478889999999999888876 


Q ss_pred             ------CCCEEEEecccCCC-C------CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF-E------DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||.... .      ..+.++..+++|+.++.++++++    ++.+ .++||++||..++...    
T Consensus        79 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----  153 (271)
T 3tzq_B           79 TIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAY----  153 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCC----
Confidence                  68999999998632 1      12233588999999999999988    5555 6899999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+.+.++.+   +|+++++++||.+++|........   ....... .
T Consensus       154 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~---~~~~~~~-~  211 (271)
T 3tzq_B          154 ------------------DMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQ---PIVDIFA-T  211 (271)
T ss_dssp             ------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CH---HHHHHHH-T
T ss_pred             ------------------CCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCH---HHHHHHH-h
Confidence                              34567999999999999999887   589999999999999865422211   1111111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ..+.     ..+.+++|+|+++++++.....  .| .++++++
T Consensus       212 ~~~~-----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  249 (271)
T 3tzq_B          212 HHLA-----GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG  249 (271)
T ss_dssp             TSTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence            1222     2688999999999999975432  34 4667665

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=5.1e-28  Score=199.67  Aligned_cols=219  Identities=17%  Similarity=0.178  Sum_probs=143.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHh-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAI-   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-   80 (285)
                      ..+|+||||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.+++++++ 
T Consensus        12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (266)
T 1xq1_A           12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE--------YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQ   83 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence            3568999999999999999999999999999999976        22211 1111111346889999999999888877 


Q ss_pred             -------cCCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 -------AGCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 -------~~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             ..+|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .++||++||..++...    
T Consensus        84 ~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----  158 (266)
T 1xq1_A           84 TVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA----  158 (266)
T ss_dssp             HHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------
T ss_pred             HHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCC----
Confidence                   3589999999975431     12233578999999999999888    4455 7899999998765432    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+++.++.++   |++++++|||.+++|.......   ..+...... 
T Consensus       159 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~-  216 (266)
T 1xq1_A          159 ------------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFKKVVIS-  216 (266)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------
T ss_pred             ------------------CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcC---HHHHHHHHh-
Confidence                              234679999999999999988774   8999999999999986432110   000111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..++     ..+++++|+|+++.+++....  ..| .++++++
T Consensus       217 ~~~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  254 (266)
T 1xq1_A          217 RKPL-----GRFGEPEEVSSLVAFLCMPAASYITGQTICVDGG  254 (266)
T ss_dssp             ------------CCGGGGHHHHHHHTSGGGTTCCSCEEECCCC
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHcCccccCccCcEEEEcCC
Confidence            1111     258899999999999997532  234 4666554

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.96  E-value=1.1e-28  Score=195.97  Aligned_cols=192  Identities=18%  Similarity=0.084  Sum_probs=149.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+|+||||+|+||++++++|+++  +|++++|+.        +....+. +..    . .++.+|++|++++.++++   
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~--------~~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~   65 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRA--------GALAELAREVG----A-RALPADLADELEAKALLEEAG   65 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCH--------HHHHHHHHHHT----C-EECCCCTTSHHHHHHHHHHHC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCH--------HHHHHHHHhcc----C-cEEEeeCCCHHHHHHHHHhcC
Confidence            57999999999999999999988  999999976        2222222 121    1 788899999999999998   


Q ss_pred             CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           82 GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        82 ~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                      ++|+|||+||.....     ..+..+..+++|+.++.++++++++.+ .++||++||..++...                
T Consensus        66 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~~~----------------  128 (207)
T 2yut_A           66 PLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYVQV----------------  128 (207)
T ss_dssp             SEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHHSS----------------
T ss_pred             CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhccCC----------------
Confidence            799999999975431     223345889999999999999997666 7899999998765322                


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcce
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM  233 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                            ++...|+.+|.+.|.+++.++.+   .|++++++|||.++++...               +..     ...+++
T Consensus       129 ------~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------~~~-----~~~~~~  182 (207)
T 2yut_A          129 ------PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------PLG-----GPPKGA  182 (207)
T ss_dssp             ------TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------GGT-----SCCTTC
T ss_pred             ------CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------ccC-----CCCCCC
Confidence                  34567999999999999998877   5899999999999987511               111     112489


Q ss_pred             eeHHHHHHHHHHhhcCCCCCce
Q 023244          234 VHVDDVARAHIFLLEYPDAKGR  255 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~  255 (285)
                      ++++|+|++++++++++..+.+
T Consensus       183 ~~~~dva~~~~~~~~~~~~~~~  204 (207)
T 2yut_A          183 LSPEEAARKVLEGLFREPVPAL  204 (207)
T ss_dssp             BCHHHHHHHHHHHHC--CCCSC
T ss_pred             CCHHHHHHHHHHHHhCCCCccc
Confidence            9999999999999987765443

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.96  E-value=3.6e-29  Score=205.12  Aligned_cols=231  Identities=17%  Similarity=0.067  Sum_probs=157.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      ||+||||||||+||++++++|+++|++|++++|+..        ...          .  .+.+|++|.++++++++   
T Consensus         1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~----------~--~~~~D~~~~~~~~~~~~~~~   60 (255)
T 2dkn_A            1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQA--------DIE----------A--DLSTPGGRETAVAAVLDRCG   60 (255)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS--------SEE----------C--CTTSHHHHHHHHHHHHHHHT
T ss_pred             CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh--------Hcc----------c--cccCCcccHHHHHHHHHHcC
Confidence            368999999999999999999999999999999871        110          0  15689999999988886   


Q ss_pred             -CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcccccCCCC-ch
Q 023244           82 -GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDETFWS-DV  155 (285)
Q Consensus        82 -~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~-~~  155 (285)
                       ++|+|||+||.... ...+ +..+++|+.++.++++++.+.    + .++||++||..+++.... ..+..|.... +.
T Consensus        61 ~~~d~vi~~Ag~~~~-~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~  136 (255)
T 2dkn_A           61 GVLDGLVCCAGVGVT-AANS-GLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAA-ELPMVEAMLAGDE  136 (255)
T ss_dssp             TCCSEEEECCCCCTT-SSCH-HHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGG-GCHHHHHHHHTCH
T ss_pred             CCccEEEECCCCCCc-chhH-HHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEecccccccccc-ccchhhhhcccch
Confidence             79999999997653 2234 589999999999999987654    4 689999999987644311 1111111000 00


Q ss_pred             h----hhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccc
Q 023244          156 D----YIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFL  228 (285)
Q Consensus       156 ~----~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
                      +    ......++...|+.||.+.|.+++.++++   .|++++++|||.++||...........  ....... .   . 
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~--~~~~~~~-~---~-  209 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRY--GESTRRF-V---A-  209 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTT--HHHHHSC-C---C-
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhh--HHHHHHH-H---H-
Confidence            0    00001134568999999999999988876   589999999999999742110000000  0000000 0   0 


Q ss_pred             cCcceeeHHHHHHHHHHhhcCC--CCCc-eEEEecc-ccCHH
Q 023244          229 LNTSMVHVDDVARAHIFLLEYP--DAKG-RYICSSH-TLTIQ  266 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~~--~~~~-~~~~~~~-~~s~~  266 (285)
                      ..++|++++|+|+++++++..+  ...| .|+++++ .++++
T Consensus       210 ~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  251 (255)
T 2dkn_A          210 PLGRGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALMR  251 (255)
T ss_dssp             TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHHC
T ss_pred             HhcCCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeeee
Confidence            2347999999999999999865  2334 6777654 44443

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.96  E-value=1.8e-27  Score=195.34  Aligned_cols=217  Identities=18%  Similarity=0.143  Sum_probs=154.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++   ..++.++.+|++|.++++++++
T Consensus         5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~   73 (257)
T 3tpc_A            5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKP--------PAGEEPAAEL---GAAVRFRNADVTNEADATAALA   73 (257)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSC--------C---------------CEEEECCTTCHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHh---CCceEEEEccCCCHHHHHHHHH
Confidence            4568999999999999999999999999999999987        22111 1111   3478899999999998888876


Q ss_pred             -------CCCEEEEecccCCCC---------CCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEecccee
Q 023244           82 -------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNAA  136 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~  136 (285)
                             .+|+|||+||.....         ..+.++..+++|+.++.++++++.+.         +..++||++||..+
T Consensus        74 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~  153 (257)
T 3tpc_A           74 FAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA  153 (257)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH
T ss_pred             HHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh
Confidence                   689999999986431         11233588999999999999988653         12568999999886


Q ss_pred             eeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHH
Q 023244          137 VFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRS  213 (285)
Q Consensus       137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~  213 (285)
                      +.+.                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++.......    .
T Consensus       154 ~~~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~----~  207 (257)
T 3tpc_A          154 FDGQ----------------------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQ----D  207 (257)
T ss_dssp             HHCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------
T ss_pred             ccCC----------------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCH----H
Confidence            5433                      33467999999999999998877   58999999999999885332111    1


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSSH  261 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  261 (285)
                      ..... ....+.    ...+.+++|+|+++.+++......|. ++++++
T Consensus       208 ~~~~~-~~~~p~----~~r~~~~~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tpc_A          208 VQDAL-AASVPF----PPRLGRAEEYAALVKHICENTMLNGEVIRLDGA  251 (257)
T ss_dssp             -------CCSSS----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHH-HhcCCC----CCCCCCHHHHHHHHHHHcccCCcCCcEEEECCC
Confidence            11111 111121    13689999999999999987555564 566654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.96  E-value=1.2e-27  Score=195.69  Aligned_cols=218  Identities=17%  Similarity=0.157  Sum_probs=157.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcC-CCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNL-PGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++ ...+.++.++.+|++|.++++++++ 
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   73 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSA--------ETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAA   73 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            57899999999999999999999999999999976        222221 111 1123478999999999999888876 


Q ss_pred             ------CCCEEEEecccCCCCC--------CChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           82 ------GCTGVLHVATPVDFED--------KEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                            ++|+|||+||......        .+..+..+++|+.++.++++++.    +.+ .++||++||..++.+.   
T Consensus        74 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---  149 (250)
T 2cfc_A           74 TMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAF---  149 (250)
T ss_dssp             HHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---
T ss_pred             HHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC---
Confidence                  6899999999754321        12235788999999877666653    445 6899999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+++.++.++   |++++++|||.+++|........  ..+......
T Consensus       150 -------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~  208 (250)
T 2cfc_A          150 -------------------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQ--PELRDQVLA  208 (250)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTS--HHHHHHHHT
T ss_pred             -------------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCC--HHHHHHHHh
Confidence                               234679999999999999988775   89999999999999863221110  111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      . .+.     ..+.+++|+|+++++++..+..  .| .++++++
T Consensus       209 ~-~~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  246 (250)
T 2cfc_A          209 R-IPQ-----KEIGTAAQVADAVMFLAGEDATYVNGAALVMDGA  246 (250)
T ss_dssp             T-CTT-----CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             c-CCC-----CCCcCHHHHHHHHHHHcCchhhcccCCEEEECCc
Confidence            1 122     2689999999999999986532  35 4566654

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.96  E-value=8.4e-28  Score=196.20  Aligned_cols=219  Identities=14%  Similarity=0.128  Sum_probs=149.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+.++|+|+||||+|+||++++++|+++|++|+++ .|+.        +.... ...+...+.++.++.+|++|.+++++
T Consensus         1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   72 (247)
T 2hq1_A            1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPAS--------TSLDATAEEFKAAGINVVVAKGDVKNPEDVEN   72 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTC--------SHHHHHHHHHHHTTCCEEEEESCTTSHHHHHH
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            66667899999999999999999999999999999 4544        21111 11111113478999999999999888


Q ss_pred             Hhc-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccC
Q 023244           79 AIA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (285)
                      +++       .+|+|||+||....      +.+++ +..+++|+.++.++++++.+    .+ .++||++||..+.++. 
T Consensus        73 ~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-  149 (247)
T 2hq1_A           73 MVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDW-DDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGN-  149 (247)
T ss_dssp             HHHHHHHHHSCCCEEEECC---------------C-HHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC--------
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCC-
Confidence            876       68999999997542      22333 58899999998888877654    45 6899999998654432 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           ++...|+.||.+.|.+++.++.++   |+++++++||.+.++.... ..   .......
T Consensus       150 ---------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~---~~~~~~~  204 (247)
T 2hq1_A          150 ---------------------AGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LP---DKVKEMY  204 (247)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SC---HHHHHHH
T ss_pred             ---------------------CCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cc---hHHHHHH
Confidence                                 234679999999999999988775   8999999999998763211 11   1111111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .. ..+     ...+++++|+|+++.+++..+.  ..| .|+++++
T Consensus       205 ~~-~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  244 (247)
T 2hq1_A          205 LN-NIP-----LKRFGTPEEVANVVGFLASDDSNYITGQVINIDGG  244 (247)
T ss_dssp             HT-TST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Hh-hCC-----CCCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence            11 112     2368999999999999987542  234 6777664

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.96  E-value=1.5e-27  Score=193.36  Aligned_cols=200  Identities=17%  Similarity=0.110  Sum_probs=136.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +||+||||||||+||++++++|+++| ++|++++|++        +....+     ...++.++.+|++|++++.+++++
T Consensus        22 ~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~--------~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~   88 (236)
T 3qvo_A           22 HMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQP--------AKIHKP-----YPTNSQIIMGDVLNHAALKQAMQG   88 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG--------GGSCSS-----CCTTEEEEECCTTCHHHHHHHHTT
T ss_pred             cccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh--------hhhccc-----ccCCcEEEEecCCCHHHHHHHhcC
Confidence            56889999999999999999999999 8999999987        222111     124789999999999999999999


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|+|||+++....             ...++++++++++.+ +++||++||..++...+.......+..+          
T Consensus        89 ~D~vv~~a~~~~~-------------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~----------  144 (236)
T 3qvo_A           89 QDIVYANLTGEDL-------------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVI----------  144 (236)
T ss_dssp             CSEEEEECCSTTH-------------HHHHHHHHHHHHHTT-CCEEEEECCCCC--------------------------
T ss_pred             CCEEEEcCCCCch-------------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhcc----------
Confidence            9999999985211             134668999999988 8999999999877554322222222221          


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA  242 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~  242 (285)
                         ..+...|..+|..+    +..|++++++|||.++++......  .        .......    ...+++++|+|++
T Consensus       145 ---~~~~~~~~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~~--~--------~~~~~~~----~~~~i~~~DvA~~  203 (236)
T 3qvo_A          145 ---GEPLKPFRRAADAI----EASGLEYTILRPAWLTDEDIIDYE--L--------TSRNEPF----KGTIVSRKSVAAL  203 (236)
T ss_dssp             ---CGGGHHHHHHHHHH----HTSCSEEEEEEECEEECCSCCCCE--E--------ECTTSCC----SCSEEEHHHHHHH
T ss_pred             ---cchHHHHHHHHHHH----HHCCCCEEEEeCCcccCCCCcceE--E--------eccCCCC----CCcEECHHHHHHH
Confidence               11333344445444    356999999999999987432210  0        0011111    1368999999999


Q ss_pred             HHHhhcCCC--CCceEEEecc
Q 023244          243 HIFLLEYPD--AKGRYICSSH  261 (285)
Q Consensus       243 ~~~~~~~~~--~~~~~~~~~~  261 (285)
                      +++++.++.  .+..|++++.
T Consensus       204 i~~ll~~~~~~~g~~~~i~~~  224 (236)
T 3qvo_A          204 ITDIIDKPEKHIGENIGINQP  224 (236)
T ss_dssp             HHHHHHSTTTTTTEEEEEECS
T ss_pred             HHHHHcCcccccCeeEEecCC
Confidence            999999876  3446776553

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.96  E-value=3.8e-28  Score=200.07  Aligned_cols=223  Identities=15%  Similarity=0.186  Sum_probs=158.0

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCC-CCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGA-SERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +....+ .++... +.++.++.+|++|.+++.+++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~   76 (263)
T 3ai3_A            5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQV--------DRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVV   76 (263)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            3568999999999999999999999999999999976        222211 111100 236889999999999888887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++...    
T Consensus        77 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  151 (263)
T 3ai3_A           77 ESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPL----  151 (263)
T ss_dssp             HHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC----
Confidence            6       689999999975431     122235889999999998888874    345 6899999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC-------ccHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA-------GSVRSS  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~  214 (285)
                                        ++...|+.||.+.+.+.+.++.+   .|++++++|||.+++|.......       ......
T Consensus       152 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  213 (263)
T 3ai3_A          152 ------------------WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGY  213 (263)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHH
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHH
Confidence                              23467999999999999998877   58999999999999974211000       000011


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .........+     ...+++++|+|+++++++..+..  .| .++++++
T Consensus       214 ~~~~~~~~~p-----~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG  258 (263)
T 3ai3_A          214 LQSVADEHAP-----IKRFASPEELANFFVFLCSERATYSVGSAYFVDGG  258 (263)
T ss_dssp             HHHHHHHHCT-----TCSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             HHHHHhcCCC-----CCCCcCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            1111110011     23689999999999999976432  34 5677654

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.96  E-value=7.5e-28  Score=198.11  Aligned_cols=219  Identities=21%  Similarity=0.174  Sum_probs=159.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCC-CCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGA-SERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++... ..++.++.+|++|.+++++++
T Consensus         8 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~   79 (262)
T 3pk0_A            8 LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRST--------ADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALA   79 (262)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHH
Confidence            3568999999999999999999999999999999986        22221 1122111 247899999999999888887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.    + .+++|++||.......    
T Consensus        80 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~----  154 (262)
T 3pk0_A           80 GRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITG----  154 (262)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBC----
T ss_pred             HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCC----
Confidence            6       689999999975431     12223578999999999988887654    5 6899999998653111    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                       .++...|+.||.+.+.+.+.++.+   .|+++++++||.++++......    ......... 
T Consensus       155 -----------------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~-  212 (262)
T 3pk0_A          155 -----------------YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENG----EEYIASMAR-  212 (262)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTC----HHHHHHHHT-
T ss_pred             -----------------CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccC----HHHHHHHHh-
Confidence                             123467999999999999999887   5899999999999987432211    111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+.     ..+.+++|+|+++.+++....  ..| .++++++
T Consensus       213 ~~p~-----~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  250 (262)
T 3pk0_A          213 SIPA-----GALGTPEDIGHLAAFLATKEAGYITGQAIAVDGG  250 (262)
T ss_dssp             TSTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            1122     268899999999999997543  234 4666654

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=2.7e-27  Score=192.80  Aligned_cols=215  Identities=17%  Similarity=0.176  Sum_probs=157.5

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.        +....+ .+.    .++.++.+|++|.+++.++++
T Consensus         5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~   72 (244)
T 3d3w_A            5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ--------ADLDSLVREC----PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc----CCCCEEEEeCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999976        222222 222    145677999999999999986


Q ss_pred             ---CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                         .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.    +..++||++||..++...         
T Consensus        73 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---------  143 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---------  143 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------
T ss_pred             HcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCC---------
Confidence               479999999975431     12233588999999999988887653    224799999998754322         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC--CccHHHHHHHHhcCccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNREE  224 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~  224 (285)
                                   ++...|+.||.+.|.+++.++.+   .|++++++|||.++++......  ......   ....  .+
T Consensus       144 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~--~~  205 (244)
T 3d3w_A          144 -------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKT---MLNR--IP  205 (244)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHH---HHHT--CT
T ss_pred             -------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHH---HHhh--CC
Confidence                         23467999999999999998877   4899999999999998532111  111111   1111  11


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                           ..++++++|+|+++++++....  ..| .|+++++
T Consensus       206 -----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  240 (244)
T 3d3w_A          206 -----LGKFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence                 2378999999999999997542  234 5777664

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.95  E-value=9.5e-28  Score=197.36  Aligned_cols=222  Identities=17%  Similarity=0.140  Sum_probs=157.1

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++
T Consensus         7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   78 (260)
T 2ae2_A            7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ--------KELNDCLTQWRSKGFKVEASVCDLSSRSERQELMN   78 (260)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999976        22211 11111113478889999999998888773


Q ss_pred             --------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           82 --------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 --------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                              .+|+|||+||.....     ..+..+..+++|+.++.++++++.    +.+ .++||++||..++.+.    
T Consensus        79 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  153 (260)
T 2ae2_A           79 TVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAV----  153 (260)
T ss_dssp             HHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCC----
T ss_pred             HHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC----
Confidence                    589999999975431     122335789999999999988874    344 6899999998754322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc-HHHHHHHHhc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS-VRSSLALILG  220 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~-~~~~~~~~~~  220 (285)
                                        ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++......... ..........
T Consensus       154 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  215 (260)
T 2ae2_A          154 ------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID  215 (260)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH
T ss_pred             ------------------CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHh
Confidence                              234679999999999999998875   899999999999887421100000 0000001111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       ..+     ...+++++|+|+++++++....  ..| .++++++
T Consensus       216 -~~~-----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  253 (260)
T 2ae2_A          216 -RCA-----LRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  253 (260)
T ss_dssp             -TST-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCC-----CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence             111     2368999999999999997532  234 4566654

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.95  E-value=6.9e-28  Score=196.79  Aligned_cols=217  Identities=15%  Similarity=0.072  Sum_probs=156.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+. ++.. .+.++.++.+|++|.++++++++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG--------ERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE   77 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHH
Confidence            468999999999999999999999999999999976        2222111 1100 12378899999999999988886


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             ++|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .++||++||..++.+.     
T Consensus        78 ~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----  151 (248)
T 2pnf_A           78 EIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGN-----  151 (248)
T ss_dssp             HHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCC-----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCC-----
Confidence                   689999999976531     11223578999999997766654    4455 6899999998655332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.+|.+.+.+.+.++.+.   +++++++|||.++++.... ..   .......... 
T Consensus       152 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~---~~~~~~~~~~-  209 (248)
T 2pnf_A          152 -----------------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LS---EEIKQKYKEQ-  209 (248)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SC---HHHHHHHHHT-
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-cc---HHHHHHHHhc-
Confidence                             234579999999999999888764   7999999999999885332 11   1111111111 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--C-CceEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--A-KGRYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~-~~~~~~~~~  261 (285)
                      .+     ...+++++|+|+++.+++....  . +..|+++++
T Consensus       210 ~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  246 (248)
T 2pnf_A          210 IP-----LGRFGSPEEVANVVLFLCSELASYITGEVIHVNGG  246 (248)
T ss_dssp             CT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence            11     1368999999999999997532  2 335777654

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.95  E-value=2.6e-27  Score=196.79  Aligned_cols=224  Identities=16%  Similarity=0.204  Sum_probs=156.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC-CCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG-ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+..       +.... ..++.. ...++.++.+|++|.+++++++
T Consensus        23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   95 (281)
T 3v2h_A           23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAP-------DEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMM   95 (281)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCH-------HHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHH
Confidence            35689999999999999999999999999999998541       21111 111111 1357899999999999988887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.    
T Consensus        96 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  170 (281)
T 3v2h_A           96 AMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVAS----  170 (281)
T ss_dssp             HHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCC----
Confidence            6       589999999985541     22233588999999999999987    4444 5799999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHH-------H
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRS-------S  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~-------~  214 (285)
                                        ++...|+.||.+.+.+.+.++.++   |+++++++||.|.+|............       .
T Consensus       171 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~  232 (281)
T 3v2h_A          171 ------------------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQV  232 (281)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC---------------------
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHH
Confidence                              234679999999999999998774   899999999999998643321111000       0


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ........     .....+++++|+|+++++++....  ..| .++++++
T Consensus       233 ~~~~~~~~-----~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG  277 (281)
T 3v2h_A          233 INEVMLKG-----QPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDGG  277 (281)
T ss_dssp             -------C-----CTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTT
T ss_pred             HHHHHHhc-----CCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECCC
Confidence            00001111     223479999999999999997653  234 5666654

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.95  E-value=5.8e-28  Score=200.13  Aligned_cols=226  Identities=19%  Similarity=0.091  Sum_probs=158.9

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..++|+||||||+|+||++++++|+++|++|++++|+..       +.... ..++...+.++.++.+|++|.+++.+++
T Consensus        18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~-------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~   90 (274)
T 1ja9_A           18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGAQGVAIQADISKPSEVVALF   90 (274)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCch-------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH
Confidence            345689999999999999999999999999999999430       22111 1111111347889999999999988888


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccc
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      +       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.- ..++||++||..++...       
T Consensus        91 ~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~-------  163 (274)
T 1ja9_A           91 DKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG-------  163 (274)
T ss_dssp             HHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS-------
T ss_pred             HHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCC-------
Confidence            6       689999999975431     112235789999999999999987651 02699999998765211       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----CC----ccH-HHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----FA----GSV-RSSL  215 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----~~----~~~-~~~~  215 (285)
                                    .++...|+.+|.+.|.+++.++.++   +++++++|||.++++.....    .+    ... ....
T Consensus       164 --------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~  229 (274)
T 1ja9_A          164 --------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKID  229 (274)
T ss_dssp             --------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHH
T ss_pred             --------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHH
Confidence                          1234679999999999999988775   89999999999988742210    00    010 1111


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC---CCceEEEecc
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKGRYICSSH  261 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~~~~~~  261 (285)
                      .... ...+     ..+|++++|+|+++++++..+.   .+..|+++++
T Consensus       230 ~~~~-~~~~-----~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG  272 (274)
T 1ja9_A          230 EGLA-NMNP-----LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG  272 (274)
T ss_dssp             HHHH-HTST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHH-hcCC-----CCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence            1111 1111     2379999999999999997643   2346777665

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.2e-27  Score=197.21  Aligned_cols=223  Identities=18%  Similarity=0.162  Sum_probs=154.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCC-------CCEEEEecCCCChhh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGAS-------ERLRIFHADLSHPDG   75 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~Dl~d~~~   75 (285)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.        +.... ..++...+       .++.++.+|++|.++
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   77 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDR--------AAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA   77 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTC------------CCEEEECCTTSHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhcCccccccCcceEEEEecCCCHHH
Confidence            457899999999999999999999999999999976        22222 22221111       468899999999998


Q ss_pred             HHHHhcC-------C-CEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeee
Q 023244           76 FDAAIAG-------C-TGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVF  138 (285)
Q Consensus        76 ~~~~~~~-------~-d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~  138 (285)
                      +.++++.       + |+|||+||.....     ..+..+..+++|+.++.++++++.+.    +..++||++||..++.
T Consensus        78 ~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~  157 (264)
T 2pd6_A           78 ARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV  157 (264)
T ss_dssp             HHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH
T ss_pred             HHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc
Confidence            8888764       3 9999999976531     12233588999999999999987654    2136999999986543


Q ss_pred             ccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHH
Q 023244          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSL  215 (285)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~  215 (285)
                      +.                      ++...|+.||.+.+.+++.++.+   .|++++++|||.+++|.......    ...
T Consensus       158 ~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~  211 (264)
T 2pd6_A          158 GN----------------------VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ----KVV  211 (264)
T ss_dssp             CC----------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC-------------
T ss_pred             CC----------------------CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH----HHH
Confidence            32                      23467999999999999998877   68999999999999986432110    000


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc-ccCHH
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH-TLTIQ  266 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~-~~s~~  266 (285)
                      .... ...+     ...+++++|+|+++++++....  ..| .++++++ .++..
T Consensus       212 ~~~~-~~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~  260 (264)
T 2pd6_A          212 DKIT-EMIP-----MGHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN  260 (264)
T ss_dssp             -CTG-GGCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-----
T ss_pred             HHHH-HhCC-----CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccc
Confidence            0000 0111     2368899999999999997532  234 4666654 44433

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.95  E-value=3.8e-28  Score=204.97  Aligned_cols=237  Identities=17%  Similarity=0.178  Sum_probs=163.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+. +|+|+||||||+||++++++|+++|++|++++|+....   ..++...+..+.  ..+++++.+|++|++++.+++
T Consensus         1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~---~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~   74 (313)
T 1qyd_A            1 MDK-KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVS---NIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDAL   74 (313)
T ss_dssp             -CC-CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSS---CHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHH
T ss_pred             CCC-CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCccc---chhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHH
Confidence            543 57899999999999999999999999999999986100   011222221110  136889999999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +++|+|||+++.....          .|+.++.+++++|++.+++++||+ |+   ++.....  .   +.+.       
T Consensus        75 ~~~d~vi~~a~~~~~~----------~~~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~~~--~---~~~~-------  128 (313)
T 1qyd_A           75 KQVDVVISALAGGVLS----------HHILEQLKLVEAIKEAGNIKRFLP-SE---FGMDPDI--M---EHAL-------  128 (313)
T ss_dssp             TTCSEEEECCCCSSSS----------TTTTTHHHHHHHHHHSCCCSEEEC-SC---CSSCTTS--C---CCCC-------
T ss_pred             hCCCEEEECCccccch----------hhHHHHHHHHHHHHhcCCCceEEe-cC---CcCCccc--c---ccCC-------
Confidence            9999999999975432          146678899999998866889985 43   3221110  0   1110       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cccCcceeeHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLLNTSMVHVDD  238 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D  238 (285)
                       .+....| .+|..+|.+++    +.+++++++||+.++|+......... .  .....+....+.  .+..++|++++|
T Consensus       129 -~p~~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~g~~~~~~i~~~D  199 (313)
T 1qyd_A          129 -QPGSITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSLAQLD-G--HMMPPRDKVLIYGDGNVKGIWVDEDD  199 (313)
T ss_dssp             -SSTTHHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTSSCTT-C--CSSCCSSEECCBTTSCSEEEEECHHH
T ss_pred             -CCCcchH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccccccc-c--cccCCCCeEEEeCCCCceEEEEEHHH
Confidence             1223568 99999999875    46899999999999885322111100 0  000011111111  245689999999


Q ss_pred             HHHHHHHhhcCCCC-CceEE-Eec-cccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDA-KGRYI-CSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~-~~~~~-~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+++..++.++.. ++.|+ .++ +.+|+.|+++.+.+.+|+
T Consensus       200 va~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  242 (313)
T 1qyd_A          200 VGTYTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  242 (313)
T ss_dssp             HHHHHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence            99999999987654 34555 444 689999999999998885

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.95  E-value=5.4e-27  Score=193.27  Aligned_cols=206  Identities=18%  Similarity=0.195  Sum_probs=154.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +....+.     ..++.++.+|++|.++++++++  
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~   81 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV--------ERLKALN-----LPNTLCAQVDVTDKYTFDTAITRA   81 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH--------HHHHTTC-----CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHhh-----cCCceEEEecCCCHHHHHHHHHHH
Confidence            467899999999999999999999999999999976        2222221     2378899999999998888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.       
T Consensus        82 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~~-------  153 (266)
T 3p19_A           82 EKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTF-------  153 (266)
T ss_dssp             HHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-------
T ss_pred             HHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCCC-------
Confidence                 589999999986431     12233578999999999977665    3455 6899999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++...............   ....+
T Consensus       154 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~---~~~~~  215 (266)
T 3p19_A          154 ---------------PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYD---AWRVD  215 (266)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHH---HHHHH
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHH---hhccc
Confidence                           33467999999999999998877   4899999999999988543322111111111   00111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDAK  253 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  253 (285)
                           ...+++++|+|+++++++.++...
T Consensus       216 -----~~r~~~pedvA~av~~l~~~~~~~  239 (266)
T 3p19_A          216 -----MGGVLAADDVARAVLFAYQQPQNV  239 (266)
T ss_dssp             -----TTCCBCHHHHHHHHHHHHHSCTTE
T ss_pred             -----ccCCCCHHHHHHHHHHHHcCCCCc
Confidence                 126899999999999999987653

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.95  E-value=8.5e-28  Score=190.24  Aligned_cols=188  Identities=17%  Similarity=0.123  Sum_probs=146.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +|+|+||||+|+||++++++|+ +|++|++++|+.                      .  .+.+|++|.+++++++++  
T Consensus         3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~----------------------~--~~~~D~~~~~~~~~~~~~~~   57 (202)
T 3d7l_A            3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHS----------------------G--DVTVDITNIDSIKKMYEQVG   57 (202)
T ss_dssp             SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSS----------------------S--SEECCTTCHHHHHHHHHHHC
T ss_pred             CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCc----------------------c--ceeeecCCHHHHHHHHHHhC
Confidence            4589999999999999999999 999999999987                      1  367999999999998875  


Q ss_pred             -CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCCCCch
Q 023244           83 -CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV  155 (285)
Q Consensus        83 -~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~  155 (285)
                       +|+|||+||.....     ..+.....+++|+.++.++++++.+.- ..++||++||..++...               
T Consensus        58 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~---------------  122 (202)
T 3d7l_A           58 KVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPI---------------  122 (202)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCC---------------
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCC---------------
Confidence             89999999975431     112234778899999999999998761 12699999998654221               


Q ss_pred             hhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcce
Q 023244          156 DYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM  233 (285)
Q Consensus       156 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                             ++...|+.+|.+.|.+++.++.+.  |++++++|||.++++...              .+..     ...+++
T Consensus       123 -------~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~--------------~~~~-----~~~~~~  176 (202)
T 3d7l_A          123 -------VQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK--------------LEPF-----FEGFLP  176 (202)
T ss_dssp             -------TTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH--------------HGGG-----STTCCC
T ss_pred             -------CccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh--------------hhhh-----ccccCC
Confidence                   234679999999999999988664  899999999999987410              0111     113479


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYIC  258 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~  258 (285)
                      ++++|+|++++.++.....+..|++
T Consensus       177 ~~~~dva~~~~~~~~~~~~G~~~~v  201 (202)
T 3d7l_A          177 VPAAKVARAFEKSVFGAQTGESYQV  201 (202)
T ss_dssp             BCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred             CCHHHHHHHHHHhhhccccCceEec
Confidence            9999999999998865434446665

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.95  E-value=9e-28  Score=196.73  Aligned_cols=218  Identities=18%  Similarity=0.142  Sum_probs=135.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++.....++.++.+|++|.++++++
T Consensus         5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   76 (253)
T 3qiv_A            5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINA--------EAAEAVAKQIVADGGTAISVAVDVSDPESAKAM   76 (253)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            455678999999999999999999999999999999976        22222 112212234788999999999988888


Q ss_pred             hc-------CCCEEEEecccCCC--------CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeecc
Q 023244           80 IA-------GCTGVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~  140 (285)
                      ++       .+|+|||+||....        ...+..+..+++|+.++.++.++    +++.+ .++||++||..++.. 
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~-  154 (253)
T 3qiv_A           77 ADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWLY-  154 (253)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccCC-
Confidence            76       68999999997321        11223358899999996665555    44555 679999999886521 


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                              ...|+.||.+.+.+++.++.++   |+++++++||.++++........   .....
T Consensus       155 ------------------------~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~  207 (253)
T 3qiv_A          155 ------------------------SNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPK---EMVDD  207 (253)
T ss_dssp             -----------------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------
T ss_pred             ------------------------CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcH---HHHHH
Confidence                                    2459999999999999999885   79999999999999854322111   00111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~~  261 (285)
                      .. ...+     ...+.+++|+|+++++++.....   +..|+++++
T Consensus       208 ~~-~~~~-----~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  248 (253)
T 3qiv_A          208 IV-KGLP-----LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDGG  248 (253)
T ss_dssp             ------------------CCHHHHHHHHHHSGGGTTCCSCEEEC---
T ss_pred             Hh-ccCC-----CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            11 1111     22578899999999999975432   345676554

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.95  E-value=4.8e-27  Score=193.69  Aligned_cols=218  Identities=16%  Similarity=0.129  Sum_probs=157.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+..+|+|+||||+|+||++++++|+++|++|++++|+.        +.... ..++   ..++.++.+|++|.++++++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~   76 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPN--------SGGEAQAKKL---GNNCVFAPADVTSEKDVQTA   76 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT--------SSHHHHHHHH---CTTEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc--------HhHHHHHHHh---CCceEEEEcCCCCHHHHHHH
Confidence            444568999999999999999999999999999999987        22222 2222   23789999999999999888


Q ss_pred             hc-------CCCEEEEecccCCCC-----------CCChHHHHHHHHHHHHHHHHHHHHhc----------CCccEEEEe
Q 023244           80 IA-------GCTGVLHVATPVDFE-----------DKEPEEVITQRAINGTLGILKSCLKS----------GTVKRVVYT  131 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~~v~~  131 (285)
                      ++       .+|+|||+||.....           ..+..+..+++|+.++.++++++.+.          + .++||++
T Consensus        77 ~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~i  155 (265)
T 2o23_A           77 LALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINT  155 (265)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEE
T ss_pred             HHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEe
Confidence            86       689999999976431           11223588999999999999988754          3 6799999


Q ss_pred             ccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC
Q 023244          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA  208 (285)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~  208 (285)
                      ||..++...                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++..... .
T Consensus       156 sS~~~~~~~----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~  212 (265)
T 2o23_A          156 ASVAAFEGQ----------------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-P  212 (265)
T ss_dssp             CCTHHHHCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------
T ss_pred             CChhhcCCC----------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc-C
Confidence            998765332                      23467999999999999888876   389999999999988753221 1


Q ss_pred             ccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 023244          209 GSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSSH  261 (285)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  261 (285)
                      ..   ........ .+.    ...+++++|+|+++++++..+...|. +.+.++
T Consensus       213 ~~---~~~~~~~~-~~~----~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdgG  258 (265)
T 2o23_A          213 EK---VCNFLASQ-VPF----PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDGA  258 (265)
T ss_dssp             -------CHHHHT-CSS----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HH---HHHHHHHc-CCC----cCCCCCHHHHHHHHHHHhhcCccCceEEEECCC
Confidence            00   00001101 111    02688999999999999986655554 556554

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.95  E-value=5.8e-27  Score=194.85  Aligned_cols=230  Identities=17%  Similarity=0.177  Sum_probs=160.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcccc----Cccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR----NSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.......    ..+.... .......+.++.++.+|++|.+++++
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            468999999999999999999999999999999974110000    0011111 11111124578999999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCC
Q 023244           79 AIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      +++       .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++...  
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~--  165 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSAN--  165 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC--
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcCCC--
Confidence            876       589999999986531     122335889999999999998863    344 5799999998765332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC----------Cc
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF----------AG  209 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~----------~~  209 (285)
                                          ++...|+.||.+.+.+.+.++.+   +|+++++++||.|++|......          ..
T Consensus       166 --------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~  225 (281)
T 3s55_A          166 --------------------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP  225 (281)
T ss_dssp             --------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred             --------------------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence                                33467999999999999999887   4899999999999998643210          00


Q ss_pred             cHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          210 SVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .............     ....+|++++|+|+++++++.....  .| .++++++
T Consensus       226 ~~~~~~~~~~~~~-----~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  275 (281)
T 3s55_A          226 TLKDVESVFASLH-----LQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAG  275 (281)
T ss_dssp             CHHHHHHHHHHHC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhHHHHHHHhhh-----ccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence            0111111100111     1124799999999999999976432  34 5677664

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.95  E-value=2.1e-28  Score=200.94  Aligned_cols=221  Identities=17%  Similarity=0.152  Sum_probs=158.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecC-CCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS-ELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+ .        +.... ..++...+.++.++.+|++|.++++++++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   77 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAP--------ANIDETIASMRADGGDAAFFAADLATSEACQQLVD   77 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCC--------TTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCch--------hhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            46899999999999999999999999999999998 4        22211 11111113478899999999999988887


Q ss_pred             -------CCCEEEEeccc-CCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc--------CCccEEEEeccceeeecc
Q 023244           82 -------GCTGVLHVATP-VDF-----EDKEPEEVITQRAINGTLGILKSCLKS--------GTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        82 -------~~d~vih~a~~-~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~SS~~~~~~~  140 (285)
                             .+|+|||+||. ...     ...+..+..+++|+.++.++++++.+.        +..++||++||..++...
T Consensus        78 ~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  157 (258)
T 3afn_B           78 EFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGG  157 (258)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCC
T ss_pred             HHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCC
Confidence                   78999999997 322     111223578899999999988876432        112799999998754311


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                           .++...|+.||.+.|.+++.++.+.   |++++++|||.++++.....    ...+...
T Consensus       158 ---------------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~  212 (258)
T 3afn_B          158 ---------------------GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK----TQDVRDR  212 (258)
T ss_dssp             ---------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC----CHHHHHH
T ss_pred             ---------------------CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc----CHHHHHH
Confidence                                 1344679999999999999988775   89999999999999864331    1111122


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC---CCc-eEEEecccc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKG-RYICSSHTL  263 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~-~~~~~~~~~  263 (285)
                      ... ..+     ...+++++|+|+++++++....   ..| .|+++++..
T Consensus       213 ~~~-~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          213 ISN-GIP-----MGRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HHT-TCT-----TCSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTSS
T ss_pred             Hhc-cCC-----CCcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCcc
Confidence            211 112     2378999999999999997542   234 577776543

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.95  E-value=3.4e-27  Score=192.65  Aligned_cols=220  Identities=14%  Similarity=0.132  Sum_probs=161.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|+++||||+|+||++++++|+++|++|++++|+.        +....+ ..+...+.++.++.+|++|.++++++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   72 (247)
T 3lyl_A            1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQ--------ASAEKFENSMKEKGFKARGLVLNISDIESIQNF   72 (247)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHH
Confidence            677789999999999999999999999999999999976        222221 11111234789999999999988887


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .+++|++||..++.+.   
T Consensus        73 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---  148 (247)
T 3lyl_A           73 FAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGN---  148 (247)
T ss_dssp             HHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC---
Confidence            75       379999999986431     2223358899999999998888654    34 5799999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++......    ....... .
T Consensus       149 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~-~  204 (247)
T 3lyl_A          149 -------------------PGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLT----DEQKSFI-A  204 (247)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSC----HHHHHHH-H
T ss_pred             -------------------CCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhcc----HHHHHHH-h
Confidence                               33567999999999999888876   4899999999999988543321    1111111 1


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ...+     ...+.+++|+|+++.+++.....  .| .++++++
T Consensus       205 ~~~~-----~~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  243 (247)
T 3lyl_A          205 TKIP-----SGQIGEPKDIAAAVAFLASEEAKYITGQTLHVNGG  243 (247)
T ss_dssp             TTST-----TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcCC-----CCCCcCHHHHHHHHHHHhCCCcCCccCCEEEECCC
Confidence            2222     23789999999999999975432  34 5667654

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=5.4e-27  Score=190.72  Aligned_cols=207  Identities=20%  Similarity=0.186  Sum_probs=156.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+||||||||+||++++++|+++|++|++++|+.        +           ..++.++.+|++|.+++.++++   
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~--------~-----------~~~~~~~~~D~~~~~~~~~~~~~~~   62 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRR--------E-----------GEDLIYVEGDVTREEDVRRAVARAQ   62 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--------C-----------SSSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCc--------c-----------ccceEEEeCCCCCHHHHHHHHHHHH
Confidence            57999999999999999999999999999999987        1           1245788999999999998887   


Q ss_pred             ---CCCEEEEecccCCCC-----CCC----hHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEeccceeeecc
Q 023244           82 ---GCTGVLHVATPVDFE-----DKE----PEEVITQRAINGTLGILKSCLKSG---------TVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        82 ---~~d~vih~a~~~~~~-----~~~----~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~SS~~~~~~~  140 (285)
                         .+|+|||+||.....     ..+    ..+..+++|+.++.++++++.+.-         ..++||++||..++...
T Consensus        63 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~  142 (242)
T 1uay_A           63 EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  142 (242)
T ss_dssp             HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             hhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCC
Confidence               689999999975431     111    345889999999999999887541         12399999998865432


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            ++...|+.||.+.+.+++.++.+.   |++++++|||.++++..... .   ......
T Consensus       143 ----------------------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~  196 (242)
T 1uay_A          143 ----------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL-P---EKAKAS  196 (242)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS-C---HHHHHH
T ss_pred             ----------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc-c---hhHHHH
Confidence                                  234679999999999998888764   89999999999999753221 1   111122


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  261 (285)
                      .... .++    ...+++++|+|+++++++.+....| .++++++
T Consensus       197 ~~~~-~~~----~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~gG  236 (242)
T 1uay_A          197 LAAQ-VPF----PPRLGRPEEYAALVLHILENPMLNGEVVRLDGA  236 (242)
T ss_dssp             HHTT-CCS----SCSCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHhh-CCC----cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcCC
Confidence            2211 122    0268999999999999998744445 5667654

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.95  E-value=7e-27  Score=187.56  Aligned_cols=193  Identities=17%  Similarity=0.161  Sum_probs=141.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHH-HcCCeEEEEecCCCCccccCcc-chhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLL-DHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      |||+|+||||||+||++++++|+ ++|++|++++|++        + ....+..   ...++.++.+|++|.+++.++++
T Consensus         4 mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~--------~~~~~~~~~---~~~~~~~~~~D~~d~~~~~~~~~   72 (221)
T 3r6d_A            4 MYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQL--------KTRIPPEII---DHERVTVIEGSFQNPGXLEQAVT   72 (221)
T ss_dssp             SCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH--------HHHSCHHHH---TSTTEEEEECCTTCHHHHHHHHT
T ss_pred             eEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc--------cccchhhcc---CCCceEEEECCCCCHHHHHHHHc
Confidence            34569999999999999999999 8999999999986        3 3222211   12478999999999999999999


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+|||+|+..              |+. ++++++++++.+ +++||++||..++...+.   ...+       ...  
T Consensus        73 ~~d~vv~~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~---~~~~-------~~~--  124 (221)
T 3r6d_A           73 NAEVVFVGAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEFPV---ALEK-------WTF--  124 (221)
T ss_dssp             TCSEEEESCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCSCH---HHHH-------HHH--
T ss_pred             CCCEEEEcCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCCCc---cccc-------ccc--
Confidence            999999999853              334 889999999988 899999999886543211   0000       000  


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVAR  241 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~  241 (285)
                      ......|+.+|..+|.+++    ..+++++++|||.++++.........         ......    ...+++.+|+|+
T Consensus       125 ~~~~~~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~~---------~~~~~~----~~~~~~~~dvA~  187 (221)
T 3r6d_A          125 DNLPISYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYELI---------PEGAQF----NDAQVSREAVVK  187 (221)
T ss_dssp             HTSCHHHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEEE---------CTTSCC----CCCEEEHHHHHH
T ss_pred             cccccHHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceeec---------cCCccC----CCceeeHHHHHH
Confidence            0111279999999998875    46999999999999997322211000         000111    124899999999


Q ss_pred             HHHHhh--cCCCC
Q 023244          242 AHIFLL--EYPDA  252 (285)
Q Consensus       242 ~~~~~~--~~~~~  252 (285)
                      ++++++  .++..
T Consensus       188 ~~~~l~~~~~~~~  200 (221)
T 3r6d_A          188 AIFDILHAADETP  200 (221)
T ss_dssp             HHHHHHTCSCCGG
T ss_pred             HHHHHHHhcChhh
Confidence            999999  76653

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=7.2e-27  Score=195.22  Aligned_cols=225  Identities=15%  Similarity=0.028  Sum_probs=159.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +......+.  ...++.++.+|++|.++++++++  
T Consensus        15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~   84 (291)
T 3rd5_A           15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDT--------RKGEAAART--MAGQVEVRELDLQDLSSVRRFADGV   84 (291)
T ss_dssp             TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHTT--SSSEEEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHH--hcCCeeEEEcCCCCHHHHHHHHHhc
Confidence            468999999999999999999999999999999986        333332221  13478999999999999999987  


Q ss_pred             -CCCEEEEecccCCC----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           82 -GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        82 -~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                       .+|+|||+||....    +.+++ +..+++|+.++.++++++.+.. .++||++||..++.+.........+..+    
T Consensus        85 ~~iD~lv~nAg~~~~~~~~~~~~~-~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~~----  158 (291)
T 3rd5_A           85 SGADVLINNAGIMAVPYALTVDGF-ESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSRR----  158 (291)
T ss_dssp             CCEEEEEECCCCCSCCCCBCTTSC-BHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSSC----
T ss_pred             CCCCEEEECCcCCCCcccCCHHHH-HHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCcccccccccC----
Confidence             46999999998653    23344 5899999999999999999887 6799999998876443222211122111    


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHc---C--CcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCc
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEH---G--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT  231 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~--i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                           .++...|+.||.+.+.+.+.++.++   |  +++++++||.|.++..........    ......  +    ..+
T Consensus       159 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~----~~~~~~--~----~~~  223 (291)
T 3rd5_A          159 -----YSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLG----DALMSA--A----TRV  223 (291)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------------
T ss_pred             -----CCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHH----HHHHHH--H----HHH
Confidence                 1334679999999999998888774   5  999999999998875332111111    000000  0    111


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceE-EEe
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRY-ICS  259 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~-~~~  259 (285)
                      -..+++|+|+.+++++..+...|.+ .+.
T Consensus       224 ~~~~~~~~A~~~~~l~~~~~~~G~~~~vd  252 (291)
T 3rd5_A          224 VATDADFGARQTLYAASQDLPGDSFVGPR  252 (291)
T ss_dssp             -CHHHHHHHHHHHHHHHSCCCTTCEEEET
T ss_pred             HhCCHHHHHHHHHHHHcCCCCCCceeCCc
Confidence            2346999999999999886566665 443

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=99.95  E-value=3.8e-27  Score=194.91  Aligned_cols=219  Identities=16%  Similarity=0.104  Sum_probs=158.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        .......++...+.++.++.+|++|.+++.++.+  
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (273)
T 3uf0_A           30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD--------GVKEVADEIADGGGSAEAVVADLADLEGAANVAEEL  101 (273)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH--------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999765        2222222222234578999999999998877754  


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.        
T Consensus       102 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~--------  172 (273)
T 3uf0_A          102 AATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGG--------  172 (273)
T ss_dssp             HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--------
T ss_pred             HhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCC--------
Confidence                589999999986541     122335889999999999988773    445 6799999998765332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.+|....... ..........  ..+ 
T Consensus       173 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~--~~p-  234 (273)
T 3uf0_A          173 --------------RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA-DDERAAEITA--RIP-  234 (273)
T ss_dssp             --------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-SHHHHHHHHH--HST-
T ss_pred             --------------CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc-CHHHHHHHHh--cCC-
Confidence                          33467999999999999999887   58999999999999875321100 0000011111  112 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          ...+.+++|+|+++++++....  ..| .++++++
T Consensus       235 ----~~r~~~pedva~~v~~L~s~~a~~itG~~i~vdGG  269 (273)
T 3uf0_A          235 ----AGRWATPEDMVGPAVFLASDAASYVHGQVLAVDGG  269 (273)
T ss_dssp             ----TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence                2368999999999999997543  234 4667654

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=99.95  E-value=3.9e-27  Score=193.39  Aligned_cols=221  Identities=16%  Similarity=0.130  Sum_probs=158.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+ ++|++|||||+|+||++++++|+++|++|+++ .|+.        +.... ..++...+.++.++.+|++|.+++++
T Consensus         1 M~-~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   71 (258)
T 3oid_A            1 ME-QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSK--------KAALETAEEIEKLGVKVLVVKANVGQPAKIKE   71 (258)
T ss_dssp             ---CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred             CC-CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHH
Confidence            44 46899999999999999999999999999987 6654        22221 12222234579999999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCC
Q 023244           79 AIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      +++       .+|+|||+||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.  
T Consensus        72 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~--  148 (258)
T 3oid_A           72 MFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYL--  148 (258)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCC--
Confidence            876       46999999996443     1122235789999999999988874    344 5799999998765332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++....... . ........
T Consensus       149 --------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~-~~~~~~~~  206 (258)
T 3oid_A          149 --------------------ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPN-R-EDLLEDAR  206 (258)
T ss_dssp             --------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTT-H-HHHHHHHH
T ss_pred             --------------------CCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhccc-C-HHHHHHHH
Confidence                                345679999999999999998875   7999999999999875432211 1 11111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                       ...+     ...+.+++|+|+++++++.....  .| .++++++
T Consensus       207 -~~~p-----~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdGG  245 (258)
T 3oid_A          207 -QNTP-----AGRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDGG  245 (258)
T ss_dssp             -HHCT-----TSSCBCHHHHHHHHHHHTSSTTTTCCSCEEEESTT
T ss_pred             -hcCC-----CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence             1112     23689999999999999986542  34 4667654

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.95  E-value=8.1e-27  Score=191.73  Aligned_cols=209  Identities=15%  Similarity=0.185  Sum_probs=154.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++.   .++.++.+|++|.++++++++ 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~   74 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD--------EEGKAMAAELA---DAARYVHLDVTQPAQWKAAVDT   74 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTG---GGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhh---cCceEEEecCCCHHHHHHHHHH
Confidence            468899999999999999999999999999999976        222222 2221   257889999999999988887 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++.++    +++.+ .++||++||..++.+.      
T Consensus        75 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  147 (260)
T 1nff_A           75 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT------  147 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCC------
Confidence                  689999999975431     1223357899999999665555    44555 6899999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+   .|++++++|||.++++... ....       ...  ..
T Consensus       148 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~~-------~~~--~~  201 (260)
T 1nff_A          148 ----------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVPE-------DIF--QT  201 (260)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSCT-------TCS--CC
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cchh-------hHH--hC
Confidence                            23457999999999999998877   4899999999999998532 1000       000  11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      +     ...+++++|+|+++++++....  ..| .++++++
T Consensus       202 ~-----~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG  237 (260)
T 1nff_A          202 A-----LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  237 (260)
T ss_dssp             S-----SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence            1     2368999999999999997542  234 5677654

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.95  E-value=6.5e-28  Score=196.57  Aligned_cols=217  Identities=16%  Similarity=0.176  Sum_probs=152.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhhh-hcCCCCCCCEEE-EecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRI-FHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~   81 (285)
                      +|+|+||||+|+||++++++|+++|++|+++ +|+.        +....+ .++...+.++.. +.+|++|.++++++++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   72 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNR--------EKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVH   72 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCH--------HHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Confidence            4689999999999999999999999999998 6765        222211 111111235566 8999999998888765


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             ++|+|||+||.....     ..+..+..+++|+.++.++    ++.+++.+ .++||++||..++.+.     
T Consensus        73 ~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~-----  146 (245)
T 2ph3_A           73 QAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGN-----  146 (245)
T ss_dssp             HHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCC-----
Confidence                   689999999975431     1223358899999995554    45555566 7899999998755332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+.+.++.+.   |++++++|||.++++..... .   .......... 
T Consensus       147 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~~-  204 (245)
T 2ph3_A          147 -----------------PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL-P---QEVKEAYLKQ-  204 (245)
T ss_dssp             -----------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS-C---HHHHHHHHHT-
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc-C---HHHHHHHHhc-
Confidence                             234679999999999999888775   89999999999998753221 1   1111111111 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSHT  262 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~~  262 (285)
                      .+     ...+++++|+|+++++++..+.  ..| .++++++.
T Consensus       205 ~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~  242 (245)
T 2ph3_A          205 IP-----AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGGL  242 (245)
T ss_dssp             CT-----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred             CC-----CCCCcCHHHHHHHHHHHhCcccccccCCEEEECCCC
Confidence            11     2368999999999999997542  224 56776654

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=99.95  E-value=3.3e-27  Score=192.73  Aligned_cols=215  Identities=17%  Similarity=0.164  Sum_probs=158.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +....+.+.  ...+..++.+|++|.++++++++  
T Consensus         8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~   77 (248)
T 3op4_A            8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSE--------SGAQAISDY--LGDNGKGMALNVTNPESIEAVLKAI   77 (248)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHH--HGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hcccceEEEEeCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999976        222222211  01257889999999999888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.       
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------  149 (248)
T 3op4_A           78 TDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGN-------  149 (248)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCC-------
Confidence                 689999999986531     2223358899999999999888754    44 5799999998765433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.......   .........  .+
T Consensus       150 ---------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~--~p  209 (248)
T 3op4_A          150 ---------------AGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALND---EQRTATLAQ--VP  209 (248)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCH---HHHHHHHHT--CT
T ss_pred             ---------------CCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCH---HHHHHHHhc--CC
Confidence                           345679999999999999888764   8999999999999875433211   111111111  12


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                           ...+.+++|+|+++.+++.....  .| .++++++
T Consensus       210 -----~~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG  244 (248)
T 3op4_A          210 -----AGRLGDPREIASAVAFLASPEAAYITGETLHVNGG  244 (248)
T ss_dssp             -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence                 23689999999999999975432  34 4566664

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=99.95  E-value=4.3e-27  Score=194.23  Aligned_cols=216  Identities=15%  Similarity=0.116  Sum_probs=158.4

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+..       +....+ ..+...+.++.++.+|++|.++++++++
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~   98 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSA-------GAADEVVAAIAAAGGEAFAVKADVSQESEVEALFA   98 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCCh-------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            35689999999999999999999999999999998541       111111 1111123478899999999998888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.     
T Consensus        99 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  172 (269)
T 4dmm_A           99 AVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGN-----  172 (269)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCC-----
Confidence                   589999999986531     123335889999999999988864    344 5799999998765433     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++....    ..   .... ...
T Consensus       173 -----------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~---~~~~-~~~  227 (269)
T 4dmm_A          173 -----------------PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----LA---AEKL-LEV  227 (269)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----HH---HHHH-GGG
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----cc---HHHH-Hhc
Confidence                             23467999999999999888876   48999999999999875321    11   1111 112


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCC---Cc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~-~~~~~~~  261 (285)
                      .+.     ..+.+++|+|+++++++..+..   .| .++++++
T Consensus       228 ~p~-----~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdGG  265 (269)
T 4dmm_A          228 IPL-----GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDGG  265 (269)
T ss_dssp             CTT-----SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEESTT
T ss_pred             CCC-----CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECCC
Confidence            222     3689999999999999987422   34 5667654

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=99.95  E-value=2.3e-27  Score=196.62  Aligned_cols=222  Identities=18%  Similarity=0.152  Sum_probs=158.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +....+...  ...++.++.+|++|.+++++++
T Consensus        23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~   92 (277)
T 4dqx_A           23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNE--------DAAVRVANE--IGSKAFGVRVDVSSAKDAESMV   92 (277)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHH--HCTTEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCceEEEEecCCCHHHHHHHH
Confidence            344578999999999999999999999999999999976        322222211  1347889999999999888887


Q ss_pred             c-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.    
T Consensus        93 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  167 (277)
T 4dqx_A           93 EKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAI----  167 (277)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCC----
Confidence            6       58999999997543     11223357889999999988888743    33 5799999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC--CccHHHHHHHHh
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF--AGSVRSSLALIL  219 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~~~~~~  219 (285)
                                        ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++......  ........... 
T Consensus       168 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-  228 (277)
T 4dqx_A          168 ------------------ADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDF-  228 (277)
T ss_dssp             ------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHH-
T ss_pred             ------------------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHH-
Confidence                              344679999999999999988775   899999999999886411000  00011111111 


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ....+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       229 ~~~~~-----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  268 (277)
T 4dqx_A          229 NARAV-----MDRMGTAEEIAEAMLFLASDRSRFATGSILTVDGG  268 (277)
T ss_dssp             HTTST-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HhcCc-----ccCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCc
Confidence            11122     2368899999999999997543  234 5667665

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=99.95  E-value=1.1e-26  Score=190.64  Aligned_cols=221  Identities=13%  Similarity=0.063  Sum_probs=157.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++.....++.++.+|++|.++++++++ 
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   76 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTK--------EKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ   76 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        22222 22222334579999999999998888876 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||....     ...+.++..+++|+.++.++.+++.    +.+..++||++||..++...      
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  150 (257)
T 3imf_A           77 IDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAG------  150 (257)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCC------
Confidence                  57999999996443     1122335889999999999988873    22225799999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      ++...|+.||.+.+.+.+.++.+    .|+++++++||.+.++........ ......... ..
T Consensus       151 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~-~~~~~~~~~-~~  212 (257)
T 3imf_A          151 ----------------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWI-SEEMAKRTI-QS  212 (257)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHH-TT
T ss_pred             ----------------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhccc-CHHHHHHHH-hc
Confidence                            23467999999999888887754    489999999999998854321100 000001111 11


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       213 ~p-----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  249 (257)
T 3imf_A          213 VP-----LGRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDGG  249 (257)
T ss_dssp             ST-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCcCHHHHHHHHHHHcCchhcCccCCEEEECCC
Confidence            12     2368999999999999997543  234 4566654

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.95  E-value=1.7e-26  Score=188.83  Aligned_cols=219  Identities=15%  Similarity=0.110  Sum_probs=148.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|+++||||+|+||++++++|+++|++|++++|+.        +.    ...     .+.++.+|++|.+++.+++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~----~~~-----~~~~~~~D~~d~~~~~~~~   65 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAF--------TQ----EQY-----PFATEVMDVADAAQVAQVC   65 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCC--------CS----SCC-----SSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCch--------hh----hcC-----CceEEEcCCCCHHHHHHHH
Confidence            555578999999999999999999999999999999987        11    111     3678899999999988887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..++...    
T Consensus        66 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~----  140 (250)
T 2fwm_X           66 QRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPR----  140 (250)
T ss_dssp             HHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC----
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC----
Confidence            6       589999999975431     12233588999999999998887    4445 6899999998764322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHH-HHhc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILG  220 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~  220 (285)
                                        ++...|+.||.+.+.+.+.++.+.   |++++++|||.++++........  ..... ....
T Consensus       141 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~  200 (250)
T 2fwm_X          141 ------------------IGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVS--DDAEEQRIRG  200 (250)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------
T ss_pred             ------------------CCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccC--hhHHHHHHhh
Confidence                              234679999999999999988774   89999999999999853321000  00000 0000


Q ss_pred             Cccccc-cccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYG-FLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~-~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ....+. ......+.+++|+|+++++++..+.  ..| .+++.++
T Consensus       201 ~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (250)
T 2fwm_X          201 FGEQFKLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDGG  245 (250)
T ss_dssp             ---------------CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhcccccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            000000 0012258899999999999997642  234 4556554

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.95  E-value=1.8e-26  Score=189.22  Aligned_cols=220  Identities=14%  Similarity=0.125  Sum_probs=156.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.     . .+....+..   .+.++.++.+|++|.++++++++  
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~-----~-~~~~~~l~~---~~~~~~~~~~D~~~~~~v~~~~~~~   73 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGD-----P-APALAEIAR---HGVKAVHHPADLSDVAQIEALFALA   73 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC-----C-HHHHHHHHT---TSCCEEEECCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-----h-HHHHHHHHh---cCCceEEEeCCCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999987     1 111222222   23468889999999999988887  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++.+++    ++.+ .++||++||..++.+.       
T Consensus        74 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  145 (255)
T 2q2v_A           74 EREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGS-------  145 (255)
T ss_dssp             HHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCC-------
Confidence                 689999999975431     12233588999999776665554    5555 6899999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHH---H----HH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSS---L----AL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~---~----~~  217 (285)
                                     ++...|+.||.+.+.+.+.++.+.   |++++++|||.+++|...... ......   .    ..
T Consensus       146 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~  209 (255)
T 2q2v_A          146 ---------------TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQI-DDRAANGGDPLQAQHD  209 (255)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHH-HHHHHHTCCHHHHHHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhc-ccccccccchHHHHHH
Confidence                           234679999999999999998874   799999999999987421100 000000   0    11


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ......+     ...+++++|+|+++++++..+.  ..| .++++++
T Consensus       210 ~~~~~~p-----~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  251 (255)
T 2q2v_A          210 LLAEKQP-----SLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDGG  251 (255)
T ss_dssp             HHTTTCT-----TCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHhccCC-----CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECCC
Confidence            1011112     2379999999999999997543  234 5666654

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.95  E-value=1e-26  Score=191.48  Aligned_cols=219  Identities=17%  Similarity=0.090  Sum_probs=156.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +....+ .++.   .++.++.+|++|.++++++++ 
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~~~   79 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDV--------MAAQAVVAGLE---NGGFAVEVDVTKRASVDAAMQK   79 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTCT---TCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHHHH
Confidence            357999999999999999999999999999999976        332222 2222   267889999999999888886 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.    +..++||++||..++...      
T Consensus        80 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  153 (263)
T 3ak4_A           80 AIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA------  153 (263)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC------
Confidence                  689999999975431     11233588999999999998887643    224799999998754322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc--H-----HHHHH
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS--V-----RSSLA  216 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~--~-----~~~~~  216 (285)
                                      ++...|+.||.+.+.+.+.++.++   |++++++|||.++++.........  .     .....
T Consensus       154 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  217 (263)
T 3ak4_A          154 ----------------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRA  217 (263)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHH
Confidence                            234679999999999999988774   899999999999987421100000  0     00011


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .... ..+     ...+++++|+|+++++++..+.  ..| .++++++
T Consensus       218 ~~~~-~~p-----~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  259 (263)
T 3ak4_A          218 EYVS-LTP-----LGRIEEPEDVADVVVFLASDAARFMTGQGINVTGG  259 (263)
T ss_dssp             HHHH-TCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHh-cCC-----CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECcC
Confidence            1111 111     2368999999999999997542  234 5677654

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=99.95  E-value=1.9e-27  Score=195.00  Aligned_cols=218  Identities=16%  Similarity=0.107  Sum_probs=159.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   82 (256)
T 3gaf_A           11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS--------EGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA   82 (256)
T ss_dssp             TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22222 11111224578999999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+||.....    ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.       
T Consensus        83 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  154 (256)
T 3gaf_A           83 ALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTN-------  154 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCC-------
Confidence                  589999999986541    112335889999999999999874    334 5799999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.......   ........ ...+
T Consensus       155 ---------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~-~~~p  215 (256)
T 3gaf_A          155 ---------------VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLT---PEIERAML-KHTP  215 (256)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCC---HHHHHHHH-TTCT
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccC---HHHHHHHH-hcCC
Confidence                           334679999999999999998774   8999999999998874211110   11111111 1222


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       216 ~-----~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdgG  250 (256)
T 3gaf_A          216 L-----GRLGEAQDIANAALFLCSPAAAWISGQVLTVSGG  250 (256)
T ss_dssp             T-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCCHHHHHHHHHHHcCCcccCccCCEEEECCC
Confidence            2     378999999999999997543  234 5677664

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=99.95  E-value=4.1e-27  Score=196.50  Aligned_cols=217  Identities=19%  Similarity=0.149  Sum_probs=158.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCC-CCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGAS-ERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +... ...++.... .++.++.+|++|.++++++++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~  111 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSP--------RELSSVTAELGELGAGNVIGVRLDVSDPGSCADAAR  111 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHH
Confidence            468999999999999999999999999999999987        2222 222222222 478999999999998888765


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceee-eccCCCC
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAV-FYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~-~~~~~~~  144 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..+. .+.    
T Consensus       112 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~----  186 (293)
T 3rih_A          112 TVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGY----  186 (293)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBC----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCC----
Confidence                   479999999986531     12233588999999999999887    3555 6899999998753 221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+.+.++.+   .|+++++++||.|+++......    ......... 
T Consensus       187 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~-  243 (293)
T 3rih_A          187 ------------------PGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMAR-  243 (293)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHT-
T ss_pred             ------------------CCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHh-
Confidence                              23467999999999999998877   4899999999999997432211    111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+.     ..+..++|+|+++.+++....  ..| .+++.++
T Consensus       244 ~~p~-----~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  281 (293)
T 3rih_A          244 SIPM-----GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDGG  281 (293)
T ss_dssp             TSTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            1222     257899999999999996543  234 4666654

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.95  E-value=1.2e-27  Score=198.51  Aligned_cols=222  Identities=19%  Similarity=0.149  Sum_probs=157.3

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++
T Consensus        20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~   91 (277)
T 2rhc_B           20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE--------EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVA   91 (277)
T ss_dssp             TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999976        22211 11111113478899999999998888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.      + .++||++||..++.+.   
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~---  167 (277)
T 2rhc_B           92 AVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGV---  167 (277)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCC---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCC---
Confidence                   589999999975431     11223588999999999999987654      4 6899999998754322   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc-H------HH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS-V------RS  213 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~-~------~~  213 (285)
                                         ++...|+.||.+.+.+.+.++.+.   |+++++++||.++++......... .      ..
T Consensus       168 -------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  228 (277)
T 2rhc_B          168 -------------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEE  228 (277)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHH
T ss_pred             -------------------CCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHH
Confidence                               234679999999999999988774   799999999999987421100000 0      00


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ...... ...     ....+++++|+|+++++++..+.  ..| .++++++
T Consensus       229 ~~~~~~-~~~-----p~~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG  273 (277)
T 2rhc_B          229 AFDRIT-ARV-----PIGRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  273 (277)
T ss_dssp             HHHHHH-HHS-----TTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHH-hcC-----CCCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            000000 011     12368999999999999997542  234 5667665

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.95  E-value=1.7e-27  Score=195.10  Aligned_cols=219  Identities=16%  Similarity=0.161  Sum_probs=154.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCE-EEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERL-RIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++   ..++ .++.+|++|.++++++++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~   78 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREA--------AALDRAAQEL---GAAVAARIVADVTDAEAMTAAAA   78 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---cccceeEEEEecCCHHHHHHHHH
Confidence            457899999999999999999999999999999976        222221 111   1256 889999999998888774


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .++||++||..++...+     
T Consensus        79 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~-----  152 (254)
T 2wsb_A           79 EAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNR-----  152 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCS-----
T ss_pred             HHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCC-----
Confidence                  589999999975431     11223578899999977776655    4455 68999999987653321     


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     ..+...|+.||.+.|.+++.++.++   |++++++|||.++++....... . .......... .
T Consensus       153 ---------------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~-~  214 (254)
T 2wsb_A          153 ---------------PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE-R-PELFETWLDM-T  214 (254)
T ss_dssp             ---------------SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT-C-HHHHHHHHHT-S
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc-C-hHHHHHHHhc-C
Confidence                           1123679999999999999988775   8999999999999974221000 0 0111111111 1


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSHT  262 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~~  262 (285)
                      +     ...+++++|+|+++++++....  ..| .++++++.
T Consensus       215 ~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG~  251 (254)
T 2wsb_A          215 P-----MGRCGEPSEIAAAALFLASPAASYVTGAILAVDGGY  251 (254)
T ss_dssp             T-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             C-----CCCCCCHHHHHHHHHHHhCcccccccCCEEEECCCE
Confidence            1     2368999999999999996532  234 46676653

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.95  E-value=4.4e-27  Score=193.86  Aligned_cols=221  Identities=19%  Similarity=0.203  Sum_probs=156.8

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+++||||+|+||++++++|+++|++|++++|+..       +....+.+ ....+.++.++.+|++|.+++.++++
T Consensus         5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   77 (264)
T 3i4f_A            5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT-------TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVE   77 (264)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHH
T ss_pred             cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh-------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            35789999999999999999999999999999988751       22222221 11223479999999999999888876


Q ss_pred             -------CCCEEEEecccCC--C-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|+|||+||...  .     ...+..+..+++|+.++.++++++    ++.+ .+++|++||........  
T Consensus        78 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~--  154 (264)
T 3i4f_A           78 EAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPG--  154 (264)
T ss_dssp             HHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCC--
T ss_pred             HHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCC--
Confidence                   6899999999421  1     112233588999999999999987    5555 68999999874331110  


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                        .++...|+.||.+.+.+.+.++.+   .|+++++++||.++++.....    ....... ..
T Consensus       155 ------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~-~~  211 (264)
T 3i4f_A          155 ------------------WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQL-KE  211 (264)
T ss_dssp             ------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC---
T ss_pred             ------------------CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHH-Hh
Confidence                              123467999999999999998877   589999999999999864332    2211111 11


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ...+.     ..+.+++|+|+++++++.....  .| +++++++
T Consensus       212 ~~~p~-----~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdGG  250 (264)
T 3i4f_A          212 HNTPI-----GRSGTGEDIARTISFLCEDDSDMITGTIIEVTGA  250 (264)
T ss_dssp             -----------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESCS
T ss_pred             hcCCC-----CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcCc
Confidence            11222     3688999999999999975432  34 4667654

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-26  Score=195.77  Aligned_cols=239  Identities=16%  Similarity=0.150  Sum_probs=156.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |++++|++|||||||+||++++++|+++|++|++++|+..   ..+.+....+.+. ...+.++.++.+|++|.+++.++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~---~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~   77 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIV---GRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRA   77 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTT---TTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCccc---ccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHH
Confidence            6656789999999999999999999999999999999741   0111222222111 11134789999999999998888


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .+++|++||..+....   
T Consensus        78 ~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~---  153 (324)
T 3u9l_A           78 IDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGT---  153 (324)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCC---
Confidence            86       689999999975431     12233578999999999999988    5556 6899999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCC---CCccHHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK---FAGSVRSSLAL  217 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~---~~~~~~~~~~~  217 (285)
                                        .+....|+.||.+.|.+.+.++.+   .|+++++++||.+.++.....   .+.........
T Consensus       154 ------------------~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  215 (324)
T 3u9l_A          154 ------------------PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEY  215 (324)
T ss_dssp             ------------------CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHH
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhh
Confidence                              123457999999999999999877   489999999999987643211   11111111111


Q ss_pred             HhcCcccccc-------ccCcceeeHHHHHHHHHHhhcCCCCC--ceEEEeccccC
Q 023244          218 ILGNREEYGF-------LLNTSMVHVDDVARAHIFLLEYPDAK--GRYICSSHTLT  264 (285)
Q Consensus       218 ~~~~~~~~~~-------~~~~~~i~~~D~a~~~~~~~~~~~~~--~~~~~~~~~~s  264 (285)
                      ........+.       ....+..+++|+|++++.++..+...  ..+.+++....
T Consensus       216 ~~~~~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~  271 (324)
T 3u9l_A          216 EAGPNAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDG  271 (324)
T ss_dssp             HHTTTTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCS
T ss_pred             ccccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchH
Confidence            1111000000       00112368999999999999877432  23556654444

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.95  E-value=1.3e-26  Score=189.43  Aligned_cols=213  Identities=16%  Similarity=0.141  Sum_probs=152.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+.        +....+. +.   ..++.++.+|++|.+++.++++ 
T Consensus        13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   81 (249)
T 3f9i_A           13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE--------EKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK   81 (249)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh
Confidence            568999999999999999999999999999999976        3333222 22   2378899999999999999887 


Q ss_pred             --CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 --GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 --~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                        .+|+|||+||....      +.+++ +..+++|+.++.++++++.+    .+ .++||++||..++.+.         
T Consensus        82 ~~~id~li~~Ag~~~~~~~~~~~~~~~-~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---------  150 (249)
T 3f9i_A           82 TSNLDILVCNAGITSDTLAIRMKDQDF-DKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGN---------  150 (249)
T ss_dssp             CSCCSEEEECCC-------------CH-HHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CC---------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCC---------
Confidence              58999999997553      23344 58999999999998887643    34 5799999998866433         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   ++...|+.||.+.+.+++.++.+   .|+++++++||.+.++.......    ....... ...+  
T Consensus       151 -------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~-~~~~--  210 (249)
T 3f9i_A          151 -------------PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNE----KQREAIV-QKIP--  210 (249)
T ss_dssp             -------------SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCH----HHHHHHH-HHCT--
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCH----HHHHHHH-hcCC--
Confidence                         33467999999999999988876   48999999999999875433211    1111111 1112  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                         ...+.+++|+|+++.+++.....  .| .++++++
T Consensus       211 ---~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG  245 (249)
T 3f9i_A          211 ---LGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG  245 (249)
T ss_dssp             ---TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ---CCCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence               23789999999999999976432  34 5677665

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.95  E-value=4.1e-27  Score=192.58  Aligned_cols=217  Identities=16%  Similarity=0.176  Sum_probs=154.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.        +.... ..++.. ..++.++.+|++|.+++.++++ 
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   75 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS--------DVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDA   75 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhhc-cCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22221 111111 1478999999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCc-cEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTV-KRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~-~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++.+++    ++.+ . ++||++||..++.+.     
T Consensus        76 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~~~-----  149 (251)
T 1zk4_A           76 TEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFVGD-----  149 (251)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTSCC-----
T ss_pred             HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhccCC-----
Confidence                  389999999975431     11223578999999877766654    4445 5 799999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                       ++...|+.||.+.|.+++.++.+     .|++++++|||.++++.... ....  . ......
T Consensus       150 -----------------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~--~-~~~~~~  208 (251)
T 1zk4_A          150 -----------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGA--E-EAMSQR  208 (251)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTH--H-HHHTST
T ss_pred             -----------------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCch--h-hhHHHh
Confidence                             23467999999999999887753     47999999999999975322 1110  0 111011


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ...+     ...+++++|+|+++++++....  ..| .++++++
T Consensus       209 ~~~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  247 (251)
T 1zk4_A          209 TKTP-----MGHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             TTCT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcCC-----CCCCcCHHHHHHHHHHHcCcccccccCcEEEECCC
Confidence            1112     2368999999999999997543  234 4666654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.95  E-value=1.3e-26  Score=191.83  Aligned_cols=221  Identities=16%  Similarity=0.122  Sum_probs=153.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|+++++++++ 
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   91 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE--------KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT   91 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22211 11111113478899999999998888773 


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++...     
T Consensus        92 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----  165 (273)
T 1ae1_A           92 VAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL-----  165 (273)
T ss_dssp             HHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC-----
T ss_pred             HHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCC-----
Confidence                   589999999975431     122335788999999999988874    444 6899999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc--HHHHHHHHhc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS--VRSSLALILG  220 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~--~~~~~~~~~~  220 (285)
                                       ++...|+.||.+.+.+.+.++.++   |+++++++||.+++|.........  ..........
T Consensus       166 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  228 (273)
T 1ae1_A          166 -----------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIV  228 (273)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHH
T ss_pred             -----------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHh
Confidence                             234679999999999999988775   899999999999998643211100  0011111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       ..+     ...+.+++|+|+++.+++....  ..| .+++.++
T Consensus       229 -~~p-----~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  266 (273)
T 1ae1_A          229 -KTP-----MGRAGKPQEVSALIAFLCFPAASYITGQIIWADGG  266 (273)
T ss_dssp             -HST-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCC-----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEECCC
Confidence             111     1268999999999999996532  234 4566654

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.95  E-value=1.4e-26  Score=192.44  Aligned_cols=235  Identities=16%  Similarity=0.128  Sum_probs=160.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc-----cCccchhhh-hcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH-----RNSKDLSFL-KNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+......     .+.+....+ ......+.++.++.+|++|.++++
T Consensus        14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   93 (280)
T 3pgx_A           14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR   93 (280)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence            46899999999999999999999999999999985311000     011111111 111223457899999999999988


Q ss_pred             HHhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccC
Q 023244           78 AAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++++       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+..++||++||..++.+. 
T Consensus        94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  172 (280)
T 3pgx_A           94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT-  172 (280)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCC-
Confidence            8876       589999999986531     2233358899999999999888743    3324789999998765332 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           ++...|+.||.+.+.+.+.++.+   .|+++++++||.|++|.....   .........
T Consensus       173 ---------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~  228 (280)
T 3pgx_A          173 ---------------------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE---AMMEIFARH  228 (280)
T ss_dssp             ---------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH---HHHHHHHHC
T ss_pred             ---------------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh---hhhhhhhcC
Confidence                                 23467999999999999999887   589999999999999863221   111111100


Q ss_pred             hcCccc--cccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecccc
Q 023244          219 LGNREE--YGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSHTL  263 (285)
Q Consensus       219 ~~~~~~--~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~~~  263 (285)
                      ......  ........+++++|+|+++++++....  ..| .++++++..
T Consensus       229 ~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          229 PSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             GGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGG
T ss_pred             chhhhhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence            000001  111111258999999999999997543  234 466766543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.95  E-value=9.9e-27  Score=191.07  Aligned_cols=214  Identities=19%  Similarity=0.158  Sum_probs=153.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|++|||||+|+||++++++|+++|++|++++|+..       +....+.+.     ++.++.+|++|.+++.+++
T Consensus        23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~-------~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~   90 (260)
T 3gem_A           23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEH-------ASVTELRQA-----GAVALYGDFSCETGIMAFI   90 (260)
T ss_dssp             ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCC-------HHHHHHHHH-----TCEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChH-------HHHHHHHhc-----CCeEEECCCCCHHHHHHHH
Confidence            3445689999999999999999999999999999999872       222333332     4788999999999888887


Q ss_pred             c-------CCCEEEEecccCCCCC--C--ChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           81 A-------GCTGVLHVATPVDFED--K--EPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~~--~--~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +       .+|+|||+||......  .  +.++..+++|+.++.++++++.+    .+ .++||++||..++.+.     
T Consensus        91 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~-----  164 (260)
T 3gem_A           91 DLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGS-----  164 (260)
T ss_dssp             HHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCC-----
T ss_pred             HHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCC-----
Confidence            6       4799999999765421  1  22247899999999999888754    34 5799999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                       ++...|+.||.+.+.+.+.++.++  ++++++++||.+.++.....  ...    .... ...
T Consensus       165 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~--~~~----~~~~-~~~  220 (260)
T 3gem_A          165 -----------------SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA--AYR----ANAL-AKS  220 (260)
T ss_dssp             -----------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------------C
T ss_pred             -----------------CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH--HHH----HHHH-hcC
Confidence                             334679999999999999998876  49999999999988742210  000    0101 111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~  261 (285)
                      +     ...+..++|+|++++++++.....| .++++++
T Consensus       221 p-----~~r~~~~edva~~v~~L~~~~~itG~~i~vdGG  254 (260)
T 3gem_A          221 A-----LGIEPGAEVIYQSLRYLLDSTYVTGTTLTVNGG  254 (260)
T ss_dssp             C-----SCCCCCTHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             C-----CCCCCCHHHHHHHHHHHhhCCCCCCCEEEECCC
Confidence            2     2257789999999999997655555 4666654

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.95  E-value=6.6e-27  Score=192.37  Aligned_cols=219  Identities=18%  Similarity=0.163  Sum_probs=156.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~   84 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ--------ENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM   84 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999976        22211 11111113478889999999998888776 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++.    +.+ .++||++||..++...     
T Consensus        85 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  158 (260)
T 2zat_A           85 AVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPF-----  158 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCC-----
Confidence                  68999999997431      1122235889999999988888864    445 6899999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++........  ....... ...
T Consensus       159 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~-~~~  218 (260)
T 2zat_A          159 -----------------PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMD--KARKEYM-KES  218 (260)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSS--HHHHHHH-HHH
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccC--hHHHHHH-Hhc
Confidence                             234679999999999999988774   89999999999998752210000  0000000 011


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      .+     ...+++++|+|+++.+++.....  .| .++++++
T Consensus       219 ~~-----~~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  255 (260)
T 2zat_A          219 LR-----IRRLGNPEDCAGIVSFLCSEDASYITGETVVVGGG  255 (260)
T ss_dssp             HT-----CSSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCCCHHHHHHHHHHHcCcccCCccCCEEEECCC
Confidence            11     23689999999999999975432  34 5677654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.95  E-value=6.1e-28  Score=203.30  Aligned_cols=232  Identities=18%  Similarity=0.233  Sum_probs=159.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |++ +|+|+||||||+||++++++|+++|++|++++|+.....  ..++...+..+.  ..+++++.+|++|++++.+++
T Consensus         1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~--~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~   75 (308)
T 1qyc_A            1 MGS-RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS--NSEKAQLLESFK--ASGANIVHGSIDDHASLVEAV   75 (308)
T ss_dssp             -CC-CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTT--THHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHH
T ss_pred             CCC-CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCccccc--CHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHH
Confidence            553 578999999999999999999999999999999861000  011222121110  137889999999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +++|+|||+++...              +.++.+++++|++.+.+++||+ |+   ++..      .+|..+.       
T Consensus        76 ~~~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~-------  124 (308)
T 1qyc_A           76 KNVDVVISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-SE---FGND------VDNVHAV-------  124 (308)
T ss_dssp             HTCSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-SC---CSSC------TTSCCCC-------
T ss_pred             cCCCEEEECCcchh--------------hhhHHHHHHHHHhcCCCceEee-cc---cccC------ccccccC-------
Confidence            99999999998643              3356789999998866889984 43   2211      1122211       


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cccCcceeeHHH
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLLNTSMVHVDD  238 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D  238 (285)
                       .+....| .+|..+|.+++.    .+++++++||+.++|+..........    .........+.  .+..++|++++|
T Consensus       125 -~p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~D  194 (308)
T 1qyc_A          125 -EPAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAGL----TAPPRDKVVILGDGNARVVFVKEED  194 (308)
T ss_dssp             -TTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTTC----SSCCSSEEEEETTSCCEEEEECHHH
T ss_pred             -CcchhHH-HHHHHHHHHHHh----cCCCeEEEEeceeccccccccccccc----cCCCCCceEEecCCCceEEEecHHH
Confidence             1113468 999999988853    58999999999998864221111000    00011111111  245689999999


Q ss_pred             HHHHHHHhhcCCCCC-ceEEE-ec-cccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPDAK-GRYIC-SS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~~~-~~~~~-~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+++..++.++... +.|++ ++ +.+|+.|+++.+.+.+|+
T Consensus       195 va~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  237 (308)
T 1qyc_A          195 IGTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  237 (308)
T ss_dssp             HHHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence            999999999876543 45554 43 689999999999999986

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.95  E-value=5.7e-27  Score=192.71  Aligned_cols=222  Identities=14%  Similarity=0.106  Sum_probs=154.6

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC--CCCCEEEEecCCCChhhHHHH
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++..  ...++.++.+|++|+++++++
T Consensus         5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   76 (260)
T 2z1n_A            5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNR--------EKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRL   76 (260)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHH
Confidence            4568999999999999999999999999999999976        222211 11110  022688999999999999888


Q ss_pred             hc------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           80 IA------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        80 ~~------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      ++      ++|+|||+||.....     ..+.++..+++|+.++.++.+++    ++.+ .++||++||..++...    
T Consensus        77 ~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  151 (260)
T 2z1n_A           77 FEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPW----  151 (260)
T ss_dssp             HHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCC----
Confidence            86      589999999975431     12233588999999997666655    4455 6899999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC------ccHHHH-
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA------GSVRSS-  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~------~~~~~~-  214 (285)
                                        ++...|+.||.+.+.+.+.++.++   |++++++|||.+++|.......      ...... 
T Consensus       152 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  213 (260)
T 2z1n_A          152 ------------------QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEA  213 (260)
T ss_dssp             ------------------TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------
T ss_pred             ------------------CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHH
Confidence                              234679999999999999888775   8999999999999986431100      000000 


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .... ....+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       214 ~~~~-~~~~p-----~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdGG  257 (260)
T 2z1n_A          214 LKSM-ASRIP-----MGRVGKPEELASVVAFLASEKASFITGAVIPVDGG  257 (260)
T ss_dssp             -------CCT-----TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHH-HhcCC-----CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            0000 01111     2368899999999999997532  234 4566554

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.95  E-value=1.1e-26  Score=190.59  Aligned_cols=217  Identities=19%  Similarity=0.190  Sum_probs=155.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|++|||||+|+||++++++|+++|++|++++|+.        +..  ....   ..++.++.+|++|.+++.+++
T Consensus         5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~--~~~~---~~~~~~~~~D~~~~~~v~~~~   71 (257)
T 3tl3_A            5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRG--------EDV--VADL---GDRARFAAADVTDEAAVASAL   71 (257)
T ss_dssp             -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSC--------HHH--HHHT---CTTEEEEECCTTCHHHHHHHH
T ss_pred             ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCch--------HHH--HHhc---CCceEEEECCCCCHHHHHHHH
Confidence            445578999999999999999999999999999999965        211  1122   347899999999999888887


Q ss_pred             c------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-----------CCccEEEEeccc
Q 023244           81 A------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-----------GTVKRVVYTSSN  134 (285)
Q Consensus        81 ~------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~~~~~v~~SS~  134 (285)
                      +      .+|+|||+||....         ...+.++..+++|+.++.++++++.+.           +...+||++||.
T Consensus        72 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  151 (257)
T 3tl3_A           72 DLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASV  151 (257)
T ss_dssp             HHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCC
T ss_pred             HHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcch
Confidence            6      68999999997432         112333588999999999999987653           114589999998


Q ss_pred             eeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccH
Q 023244          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSV  211 (285)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~  211 (285)
                      .++.+.                      ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++......    
T Consensus       152 ~~~~~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~----  205 (257)
T 3tl3_A          152 AAFDGQ----------------------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLP----  205 (257)
T ss_dssp             C--CCH----------------------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---C----
T ss_pred             hhcCCC----------------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhcc----
Confidence            865332                      223579999999999998888774   899999999999988533211    


Q ss_pred             HHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 023244          212 RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSSH  261 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  261 (285)
                      .......... .+.    ...+.+++|+|+++++++.++...|. ++++++
T Consensus       206 ~~~~~~~~~~-~~~----~~r~~~p~dva~~v~~l~s~~~itG~~i~vdGG  251 (257)
T 3tl3_A          206 EEARASLGKQ-VPH----PSRLGNPDEYGALAVHIIENPMLNGEVIRLDGA  251 (257)
T ss_dssp             HHHHHHHHHT-SSS----SCSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHHHHHHHhc-CCC----CCCccCHHHHHHHHHHHhcCCCCCCCEEEECCC
Confidence            1111111111 111    12689999999999999987655564 556554

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.95  E-value=1.3e-26  Score=188.95  Aligned_cols=217  Identities=14%  Similarity=0.120  Sum_probs=154.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEec-CCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++| +.        +....+ .++...+.++.++.+|++|.++++++++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   74 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNE--------QKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK   74 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            3689999999999999999999999999999998 43        222111 1111113478899999999999888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++.+++    ++.+ .++||++||..++.+.     
T Consensus        75 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  148 (246)
T 2uvd_A           75 QTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGN-----  148 (246)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCC-----
Confidence                   589999999975431     12233588999999977766655    4455 6899999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++...........    .... .
T Consensus       149 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~-~  206 (246)
T 2uvd_A          149 -----------------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKA----EMLK-L  206 (246)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHH----HHHH-T
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHH----HHHh-c
Confidence                             23467999999999998888766   389999999999998754321111111    1111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+.     ..+++++|+|+++++++....  ..| .+++.++
T Consensus       207 ~p~-----~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  243 (246)
T 2uvd_A          207 IPA-----AQFGEAQDIANAVTFFASDQSKYITGQTLNVDGG  243 (246)
T ss_dssp             CTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECcC
Confidence            111     268999999999999996542  234 4566554

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.95  E-value=1.3e-26  Score=191.09  Aligned_cols=220  Identities=15%  Similarity=0.075  Sum_probs=156.9

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+  |+||++++++|+++|++|++++|+.     ...+....+....   ....++.+|++|.++++++++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~   79 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-----KLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFA   79 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-----TTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-----HHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHH
Confidence            35789999999  9999999999999999999999975     1112222222111   134678999999999888876


Q ss_pred             -------CCCEEEEecccCCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|+|||+||....          ...+..+..+++|+.++.++++++.+.- ..++||++||..++...   
T Consensus        80 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---  156 (265)
T 1qsg_A           80 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---  156 (265)
T ss_dssp             HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---
T ss_pred             HHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCC---
Confidence                   57999999997542          1122335889999999999999998752 13599999998764332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+.+.++.++   |+++++++||.+++|..... .. ..........
T Consensus       157 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~~  215 (265)
T 1qsg_A          157 -------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI-KD-FRKMLAHCEA  215 (265)
T ss_dssp             -------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS-TT-HHHHHHHHHH
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcc-cc-cHHHHHHHHh
Confidence                               234579999999999999998775   89999999999999864321 11 1111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                       ..++     ..+.+++|+|+++++++.....  .| .++++++
T Consensus       216 -~~p~-----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  253 (265)
T 1qsg_A          216 -VTPI-----RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  253 (265)
T ss_dssp             -HSTT-----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -cCCC-----CCCCCHHHHHHHHHHHhCchhcCccCCEEEECCC
Confidence             1122     2588999999999999975332  34 5666654

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.95  E-value=1e-26  Score=190.80  Aligned_cols=217  Identities=13%  Similarity=0.062  Sum_probs=154.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ..+|++|||||+|+||++++++|+++|++|++++|+.        +......++.    + .++.+|++|.++++++++ 
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~   70 (256)
T 2d1y_A            4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--------EGKEVAEAIG----G-AFFQVDLEDERERVRFVEE   70 (256)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------THHHHHHHHT----C-EEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------hHHHHHHHhh----C-CEEEeeCCCHHHHHHHHHH
Confidence            3468999999999999999999999999999999987        2222222221    3 788999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.      
T Consensus        71 ~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~------  143 (256)
T 2d1y_A           71 AAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE------  143 (256)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCC------
Confidence                  579999999975431     1122358899999999999887754    34 6899999998764332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccH--HHHHHHHhcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSV--RSSLALILGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~--~~~~~~~~~~  221 (285)
                                      ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++..........  ........ .
T Consensus       144 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~  206 (256)
T 2d1y_A          144 ----------------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE-D  206 (256)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH-T
T ss_pred             ----------------CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHH-h
Confidence                            234679999999999999988774   8999999999998763111000000  00000000 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .     .....+++++|+|+++++++..+.  ..| .++++++
T Consensus       207 ~-----~~~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~gG  244 (256)
T 2d1y_A          207 L-----HALRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  244 (256)
T ss_dssp             T-----STTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----CCCCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            1     112478999999999999997642  234 5677654

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=99.95  E-value=1.4e-26  Score=192.09  Aligned_cols=222  Identities=16%  Similarity=0.157  Sum_probs=161.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNG--------NALAELTDEIAGGGGEAAALAGDVGDEALHEALVEL   78 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCH--------HHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22222 22233334588999999999998888876 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||....      ...+..+..+++|+.++.++++++.+    .+ .+++|++||..++...     
T Consensus        79 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  152 (280)
T 3tox_A           79 AVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAG-----  152 (280)
T ss_dssp             HHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBC-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCC-----
Confidence                  58999999997532      12233358899999999999888754    33 5799999998754111     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      .++...|+.||.+.+.+.+.++.++   |+++++++||.|.+|................... .
T Consensus       153 ----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~  215 (280)
T 3tox_A          153 ----------------FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEG-L  215 (280)
T ss_dssp             ----------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHT-T
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhc-c
Confidence                            1334679999999999999998775   8999999999999986433221111111111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+.     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       216 ~p~-----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  252 (280)
T 3tox_A          216 HAL-----KRIARPEEIAEAALYLASDGASFVTGAALLADGG  252 (280)
T ss_dssp             STT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Ccc-----CCCcCHHHHHHHHHHHhCccccCCcCcEEEECCC
Confidence            222     368999999999999997643  234 5667654

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.95  E-value=2.1e-26  Score=188.73  Aligned_cols=219  Identities=12%  Similarity=0.052  Sum_probs=157.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~   78 (285)
                      |+.++|+++||||+|+||++++++|+++|++ |++++|+..      .+....+.+.. ...++.++.+|++|. +++++
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~------~~~~~~l~~~~-~~~~~~~~~~D~~~~~~~~~~   73 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVEN------PTALAELKAIN-PKVNITFHTYDVTVPVAESKK   73 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCC------HHHHHHHHHHC-TTSEEEEEECCTTSCHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCch------HHHHHHHHHhC-CCceEEEEEEecCCChHHHHH
Confidence            6667889999999999999999999999997 999998761      11222222211 134788999999998 87777


Q ss_pred             Hhc-------CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC------CccEEEEeccceeeeccCCCCc
Q 023244           79 AIA-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG------TVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +++       .+|+|||+||....  +++ +..+++|+.++.++++++.+.-      ..++||++||..++...     
T Consensus        74 ~~~~~~~~~g~id~lv~~Ag~~~~--~~~-~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  145 (254)
T 1sby_A           74 LLKKIFDQLKTVDILINGAGILDD--HQI-ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-----  145 (254)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCT--TCH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHHHhcCCCCEEEECCccCCH--HHH-hhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC-----
Confidence            765       68999999997543  344 5899999999999999886431      13689999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC--ccHHHHHHHHhc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA--GSVRSSLALILG  220 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~~~~  220 (285)
                                       ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++.......  .......... .
T Consensus       146 -----------------~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~  207 (254)
T 1sby_A          146 -----------------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL-L  207 (254)
T ss_dssp             -----------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-T
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-h
Confidence                             23467999999999999988866   58999999999999874221100  0000001111 1


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  261 (285)
                               ...+.+++|+|+++++++.....+..|+++++
T Consensus       208 ---------~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~gG  239 (254)
T 1sby_A          208 ---------SHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             ---------TSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             ---------cCCCCCHHHHHHHHHHHHHcCCCCCEEEEeCC
Confidence                     11356999999999999975444446776654

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.95  E-value=2.9e-26  Score=187.29  Aligned_cols=218  Identities=15%  Similarity=0.129  Sum_probs=151.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+..      .+....+...   +.++.++.+|++|.++++++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~   76 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA------PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQV   76 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC------HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCch------hHHHHHHHhc---CCcEEEEEeecCCHHHHHHHHHHH
Confidence            4688999999999999999999999999999999751      1111122222   2478899999999998888764  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++.++    +++.+ .++||++||..++...       
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  148 (249)
T 2ew8_A           77 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI-------  148 (249)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCC-------
Confidence                 589999999975431     1223357899999998887777    45555 6899999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++..............   .....+
T Consensus       149 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~---~~~~~~  210 (249)
T 2ew8_A          149 ---------------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVL---PNMLQA  210 (249)
T ss_dssp             ---------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTSS
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHH---HHhhCc
Confidence                           234679999999999999988774   89999999999998753211100000000   000011


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                           ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       211 -----~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdGG  245 (249)
T 2ew8_A          211 -----IPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  245 (249)
T ss_dssp             -----SCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             -----cCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECCC
Confidence                 2368999999999999997532  234 4566554

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.95  E-value=1.6e-26  Score=190.14  Aligned_cols=220  Identities=15%  Similarity=0.102  Sum_probs=157.2

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+  |+||++++++|+++|++|++++|+.     ...+....+...   ...+.++.+|++|.++++++++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~   78 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE-----RLRPEAEKLAEA---LGGALLFRADVTQDEELDALFA   78 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG-----GGHHHHHHHHHH---TTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH-----HHHHHHHHHHHh---cCCcEEEECCCCCHHHHHHHHH
Confidence            46899999999  9999999999999999999999976     111122222221   1247889999999998888876


Q ss_pred             -------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|+|||+||....         ...+.++..+++|+.++.++++++.+.- ..++||++||..++...    
T Consensus        79 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~----  154 (261)
T 2wyu_A           79 GVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV----  154 (261)
T ss_dssp             HHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC----
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCC----
Confidence                   57999999997541         1122335889999999999999997751 12699999997754322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+.+.++.++   |+++++++||.++++..... .. .......... 
T Consensus       155 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~-~~~~~~~~~~-  213 (261)
T 2wyu_A          155 ------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSI-PG-FTKMYDRVAQ-  213 (261)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGC-TT-HHHHHHHHHH-
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhc-cc-cHHHHHHHHh-
Confidence                              234579999999999999988775   89999999999999853321 11 1111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ..+.     ..+.+++|+|+++++++.....  .| .++++++
T Consensus       214 ~~p~-----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  251 (261)
T 2wyu_A          214 TAPL-----RRNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (261)
T ss_dssp             HSTT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECCC
Confidence            1122     2578999999999999965322  34 5677654

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.95  E-value=3.7e-26  Score=186.59  Aligned_cols=210  Identities=15%  Similarity=0.160  Sum_probs=150.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+|+||||+|+||++++++|+++|  ++|++++|+.        +....+.+.  ...++.++.+|++|.+++.++++ 
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~--------~~~~~l~~~--~~~~~~~~~~D~~~~~~~~~~~~~   72 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV--------EKATELKSI--KDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG--------GGCHHHHTC--CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCH--------HHHHHHHhc--cCCceEEEEeecCCHHHHHHHHHH
Confidence            6899999999999999999999999  9999999987        333333333  24579999999999998888876 


Q ss_pred             --------CCCEEEEecccCC-C-----CCCChHHHHHHHHHHHHHHHHHHHHhc----------CC----ccEEEEecc
Q 023244           82 --------GCTGVLHVATPVD-F-----EDKEPEEVITQRAINGTLGILKSCLKS----------GT----VKRVVYTSS  133 (285)
Q Consensus        82 --------~~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~----~~~~v~~SS  133 (285)
                              .+|+|||+||... .     ...+..+..+++|+.++.++++++.+.          +.    .++||++||
T Consensus        73 ~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS  152 (250)
T 1yo6_A           73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             HHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEecc
Confidence                    7999999999765 2     112223578999999999988886543          21    479999999


Q ss_pred             ceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc
Q 023244          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS  210 (285)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~  210 (285)
                      ..++.....      +..+         .++...|+.||.+.+.+++.++.++   |++++++|||.+.++....     
T Consensus       153 ~~~~~~~~~------~~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----  212 (250)
T 1yo6_A          153 GLGSITDNT------SGSA---------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----  212 (250)
T ss_dssp             GGGCSTTCC------STTS---------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------
T ss_pred             CccccCCcc------cccc---------cCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----
Confidence            876543211      0110         1345679999999999999998875   8999999999998874211     


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceEE-EeccccC
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYI-CSSHTLT  264 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~-~~~~~~s  264 (285)
                                          ..+++++|+|+.+++++..+.  ..|.|+ +.++.++
T Consensus       213 --------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~  249 (250)
T 1yo6_A          213 --------------------NAALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE  249 (250)
T ss_dssp             --------------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred             --------------------CCCCCHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence                                046899999999999998765  346554 4444443

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.95  E-value=7.2e-27  Score=194.66  Aligned_cols=217  Identities=15%  Similarity=0.105  Sum_probs=154.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+|+||||||+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~  114 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ--------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK  114 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCH--------HHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH
Confidence            457999999999999999999999999999988865        22211 11111123478899999999999888874 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.    +.+ .++||++||..++.+.      
T Consensus       115 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~------  187 (285)
T 2c07_A          115 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGN------  187 (285)
T ss_dssp             HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC------
T ss_pred             HHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCC------
Confidence                  589999999976431     122335889999999877777764    445 6899999998765432      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+++.++.+.   |++++++|||.+.++..... .   ......... ..
T Consensus       188 ----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~~-~~  246 (285)
T 2c07_A          188 ----------------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI-S---EQIKKNIIS-NI  246 (285)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C-C---HHHHHHHHT-TC
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc-C---HHHHHHHHh-hC
Confidence                            234679999999999999888764   89999999999998853321 1   111111111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      +.     ..+++++|+|+++++++..+.  ..| .++++++
T Consensus       247 ~~-----~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG  282 (285)
T 2c07_A          247 PA-----GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  282 (285)
T ss_dssp             TT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence            22     258999999999999997543  234 4666654

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=99.95  E-value=2.9e-26  Score=190.27  Aligned_cols=221  Identities=17%  Similarity=0.131  Sum_probs=158.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        23 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   94 (279)
T 3sju_A           23 RPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDA--------KNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA   94 (279)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            367999999999999999999999999999999976        22221 22222224579999999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh------cCCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK------SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+      .+ .++||++||..++.+.    
T Consensus        95 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~----  169 (279)
T 3sju_A           95 AVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGV----  169 (279)
T ss_dssp             HHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCC----
Confidence                  579999999986531     1222357889999999999998754      34 5799999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCC------CCc-cHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK------FAG-SVRSS  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~------~~~-~~~~~  214 (285)
                                        ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++.....      ... .....
T Consensus       170 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  231 (279)
T 3sju_A          170 ------------------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEV  231 (279)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHH
T ss_pred             ------------------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHH
Confidence                              33467999999999999999887   489999999999988632110      000 11111


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..... ...+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       232 ~~~~~-~~~p-----~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  275 (279)
T 3sju_A          232 HERFN-AKIP-----LGRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG  275 (279)
T ss_dssp             HHHHH-TTCT-----TSSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred             HHHHH-hcCC-----CCCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence            11111 1122     2368999999999999997653  234 4666654

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=99.95  E-value=1.3e-26  Score=189.04  Aligned_cols=216  Identities=17%  Similarity=0.167  Sum_probs=158.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +..... .+.   +.++.++.+|++|.++++++++ 
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   73 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINA--------EGAKAAAASI---GKKARAIAADISDPGSVKALFAE   73 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHH
Confidence            568999999999999999999999999999999976        222222 222   3478899999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++.++    +++.+..+++|++||...+.+.      
T Consensus        74 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  147 (247)
T 3rwb_A           74 IQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGT------  147 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTC------
T ss_pred             HHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCC------
Confidence                  589999999986541     1223358899999999999888    4444435799999998765433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++.................    .
T Consensus       148 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~----~  207 (247)
T 3rwb_A          148 ----------------PNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML----Q  207 (247)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH----S
T ss_pred             ----------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc----c
Confidence                            33467999999999999998877   489999999999988743221111111111110    1


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      +     ...+..++|+|+++.+++.....  .| .++++++
T Consensus       208 ~-----~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  243 (247)
T 3rwb_A          208 A-----MKGKGQPEHIADVVSFLASDDARWITGQTLNVDAG  243 (247)
T ss_dssp             S-----SCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----cCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            1     22678999999999999975432  35 4566654

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=99.95  E-value=7.7e-27  Score=192.34  Aligned_cols=214  Identities=15%  Similarity=0.145  Sum_probs=152.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +....+ .+.   +.++.++.+|++|.++++++++ 
T Consensus        26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   94 (266)
T 3grp_A           26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE--------DKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEV   94 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        332222 222   3478999999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++.+++    ++.+ .++||++||..++.+.      
T Consensus        95 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~------  167 (266)
T 3grp_A           95 AEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGN------  167 (266)
T ss_dssp             HHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC------------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCC------
Confidence                  589999999986531     11223578999999966666655    4455 6799999998765433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.....    ......... ...
T Consensus       168 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~-~~~  226 (266)
T 3grp_A          168 ----------------PGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL----NEKQKEAIM-AMI  226 (266)
T ss_dssp             -----------------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC----CHHHHHHHH-TTC
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc----CHHHHHHHH-hcC
Confidence                            234679999999999999888774   89999999999988743221    111111111 122


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      +.     ..+.+++|+|+++++++.....  .| .++++++
T Consensus       227 p~-----~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3grp_A          227 PM-----KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG  262 (266)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            22     3689999999999999975432  34 4666654

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=99.95  E-value=3.3e-26  Score=190.29  Aligned_cols=227  Identities=15%  Similarity=0.071  Sum_probs=159.8

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +... ...++...+.++.++.+|++|.++++++++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~   97 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTR--------TEVEEVADEIVGAGGQAIALEADVSDELQMRNAVR   97 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            3568899999999999999999999999999999986        2222 222333334588999999999998888876


Q ss_pred             -------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|+|||+||....      ...+.++..+++|+.++.++++++    ++.+ .++||++||..++....   
T Consensus        98 ~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~---  173 (283)
T 3v8b_A           98 DLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFT---  173 (283)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC---
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCC---
Confidence                   58999999997532      111223588999999999999887    4455 68999999987542110   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHH--h
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI--L  219 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~--~  219 (285)
                                       .++...|+.||.+.+.+.+.++.++   |+++++++||.|.++.................  .
T Consensus       174 -----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~  236 (283)
T 3v8b_A          174 -----------------TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWP  236 (283)
T ss_dssp             -----------------STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCT
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhh
Confidence                             1345679999999999999999874   79999999999998864332111110000000  0


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ....+.   ....+..++|+|+++++++....  ..|. +++.++
T Consensus       237 ~~~~p~---~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  278 (283)
T 3v8b_A          237 KGQVPI---TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDGG  278 (283)
T ss_dssp             TCSCGG---GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhcCcc---ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence            000111   01367899999999999997543  2354 556554

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.95  E-value=1.2e-26  Score=190.54  Aligned_cols=224  Identities=19%  Similarity=0.143  Sum_probs=154.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++++..       +.. ....++...+.++.++.+|++|.++++++++ 
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   79 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAA-------EGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISA   79 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSC-------HHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999865441       211 1122222224578899999999998888876 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++.+.- +.+++|++||..++...        
T Consensus        80 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  151 (259)
T 3edm_A           80 AADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG--------  151 (259)
T ss_dssp             HHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC--------
T ss_pred             HHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC--------
Confidence                  57999999986522      1112235889999999999999998763 13589999998765111        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC--CcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   .++...|+.||.+.+.+.+.++.+++  +++++++||.+.++.......   ...... .....+  
T Consensus       152 -------------~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~---~~~~~~-~~~~~p--  212 (259)
T 3edm_A          152 -------------GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK---PEVRER-VAGATS--  212 (259)
T ss_dssp             -------------STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC--------------------------
T ss_pred             -------------CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC---hHHHHH-HHhcCC--
Confidence                         13346799999999999999988864  999999999998875332111   000011 111112  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEeccccC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSHTLT  264 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~~~s  264 (285)
                         ...+.+++|+|+++++++.....  .| .+++.|+...
T Consensus       213 ---~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          213 ---LKREGSSEDVAGLVAFLASDDAAYVTGACYDINGGVLF  250 (259)
T ss_dssp             -----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCSSB
T ss_pred             ---CCCCcCHHHHHHHHHHHcCccccCccCCEEEECCCcCC
Confidence               23688999999999999975432  34 5677776443

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.95  E-value=1.8e-26  Score=191.59  Aligned_cols=237  Identities=17%  Similarity=0.152  Sum_probs=160.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc----cCccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH----RNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+......    ...+.... .......+.++.++.+|++|.+++++
T Consensus        12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   91 (278)
T 3sx2_A           12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA   91 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            46899999999999999999999999999999987310000    00111111 11111123579999999999999888


Q ss_pred             Hhc-------CCCEEEEecccCCCCC-CChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           79 AIA-------GCTGVLHVATPVDFED-KEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                      +++       .+|+|||+||...... .+.++..+++|+.++.++++++.+    .+..++||++||..++.+...    
T Consensus        92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~----  167 (278)
T 3sx2_A           92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGS----  167 (278)
T ss_dssp             HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCC----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCcc----
Confidence            876       6899999999865522 233458899999999999998643    222469999999876533210    


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHH-HHH-hcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSL-ALI-LGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~-~~~-~~~  221 (285)
                         .           .++...|+.||.+.+.+.+.++.++   |+++++++||.|.+|.....   ...... ... ...
T Consensus       168 ---~-----------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~  230 (278)
T 3sx2_A          168 ---A-----------DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNE---FTREWLAKMAAATD  230 (278)
T ss_dssp             ---S-----------SHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH---HHHHHHHHHHHHCC
T ss_pred             ---C-----------CCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhh---hHHHHHhhccchhh
Confidence               0           0223569999999999999988775   69999999999999864321   111111 111 111


Q ss_pred             c-cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 R-EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      . ..+.......+++++|+|+++++++....  ..| .++++++
T Consensus       231 ~~~~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  274 (278)
T 3sx2_A          231 TPGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAG  274 (278)
T ss_dssp             --CTTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             hhhhhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCC
Confidence            0 01111111578999999999999997543  234 4666654

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.95  E-value=3e-27  Score=192.55  Aligned_cols=216  Identities=18%  Similarity=0.162  Sum_probs=154.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+|+||||||+||++++++|+++|++|+++ .|+.        +....+ .++...+.++.++.+|++|.++++++++ 
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   72 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA--------KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKT   72 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHH
Confidence            4789999999999999999999999999985 6654        222111 1111112378889999999999988876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .++||++||..++.+.      
T Consensus        73 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~------  145 (244)
T 1edo_A           73 AIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGN------  145 (244)
T ss_dssp             HHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCC------
Confidence                  589999999976531     1223357899999999999888765    34 6899999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.+|.+.+.+.+.++.+   .|++++++|||.++++.....    .......... ..
T Consensus       146 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~-~~  204 (244)
T 1edo_A          146 ----------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILG-TI  204 (244)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----CHHHHHHHHT-SC
T ss_pred             ----------------CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc----ChHHHHHHhh-cC
Confidence                            23467999999999999888876   489999999999998743221    1111111111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD---AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~-~~~~~~~  261 (285)
                      +.     ..+++++|+|+++++++..+.   ..| .++++++
T Consensus       205 ~~-----~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG  241 (244)
T 1edo_A          205 PL-----GRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG  241 (244)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred             CC-----CCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence            22     368999999999999985432   224 4666654

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.8e-26  Score=191.23  Aligned_cols=219  Identities=17%  Similarity=0.089  Sum_probs=154.8

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++...+ ++.++.+|++|.++++++++
T Consensus        27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~   97 (276)
T 2b4q_A           27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDA--------EACADTATRLSAYG-DCQAIPADLSSEAGARRLAQ   97 (276)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999976        22221 12222112 68889999999998888776


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCC---ccEEEEeccceeeeccCC
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGT---VKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~---~~~~v~~SS~~~~~~~~~  142 (285)
                             .+|+|||+||....     ...+.++..+++|+.++.++++++.    +.+.   .++||++||..++...  
T Consensus        98 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~--  175 (276)
T 2b4q_A           98 ALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAM--  175 (276)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCC--
T ss_pred             HHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCC--
Confidence                   58999999997543     1223335889999999988777764    3441   2799999998765332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCc-hhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGK-SYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                          +... .|+.||.+.+.+.+.++.++   |+++++++||.+.++.....    ........
T Consensus       176 --------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~----~~~~~~~~  231 (276)
T 2b4q_A          176 --------------------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHI----ANDPQALE  231 (276)
T ss_dssp             --------------------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHH----HHCHHHHH
T ss_pred             --------------------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhc----chhHHHHH
Confidence                                1223 69999999999999988774   89999999999998752210    00011111


Q ss_pred             hc-CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          219 LG-NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       219 ~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .. ...+     ...+.+++|+|+++++++..+.  ..| .+++.++
T Consensus       232 ~~~~~~p-----~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  273 (276)
T 2b4q_A          232 ADSASIP-----MGRWGRPEEMAALAISLAGTAGAYMTGNVIPIDGG  273 (276)
T ss_dssp             HHHHTST-----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhhcCCC-----CCCcCCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            11 0111     2368999999999999997542  234 4556554

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.95  E-value=2e-26  Score=190.55  Aligned_cols=221  Identities=19%  Similarity=0.126  Sum_probs=157.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|+|+||||+|+||++++++|+++|++|++++|+..       +....+. .....+.++.++.+|++|.+++.++
T Consensus        25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~   97 (271)
T 4iin_A           25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNA-------EVADALKNELEEKGYKAAVIKFDAASESDFIEA   97 (271)
T ss_dssp             CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence            3445689999999999999999999999999999999651       2222111 1111235789999999999988888


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .++||++||..++.+.   
T Consensus        98 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~---  173 (271)
T 4iin_A           98 IQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGN---  173 (271)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC---
T ss_pred             HHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCC---
Confidence            76       589999999986542     1223458899999999888877643    34 6799999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+++.++.+   .|+++++++||.+.++........    .. ....
T Consensus       174 -------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~-~~~~  229 (271)
T 4iin_A          174 -------------------MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDE----LK-ADYV  229 (271)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-----------------CG
T ss_pred             -------------------CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHH----HH-HHHH
Confidence                               34567999999999999998877   489999999999988753221100    00 0011


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..     .....+.+++|+|+++.+++....  ..| .++++++
T Consensus       230 ~~-----~~~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdGG  268 (271)
T 4iin_A          230 KN-----IPLNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNGG  268 (271)
T ss_dssp             GG-----CTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hc-----CCcCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCCC
Confidence            11     123368999999999999997543  234 4566654

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.94  E-value=4.3e-26  Score=189.92  Aligned_cols=220  Identities=13%  Similarity=0.059  Sum_probs=156.0

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+  |+||++++++|+++|++|++++|+.     ...+....+...   .+++.++.+|++|.++++++++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~   91 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATP-----KLEKRVREIAKG---FGSDLVVKCDVSLDEDIKNLKK   91 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH-----HHHHHHHHHHHh---cCCeEEEEcCCCCHHHHHHHHH
Confidence            45789999999  9999999999999999999999976     111122222211   1136788999999998888876


Q ss_pred             -------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|+|||+||....         ...+..+..+++|+.++.++++++.+.-  ..++||++||..++.+.   
T Consensus        92 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---  168 (285)
T 2p91_A           92 FLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVV---  168 (285)
T ss_dssp             HHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBC---
T ss_pred             HHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCC---
Confidence                   57999999997542         1122335889999999999999987652  13799999997754322   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+.+.++.++   |+++++++||.+++|..... .. ..........
T Consensus       169 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~-~~~~~~~~~~  227 (285)
T 2p91_A          169 -------------------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSI-TG-FHLLMEHTTK  227 (285)
T ss_dssp             -------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--C-TT-HHHHHHHHHH
T ss_pred             -------------------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcc-cc-hHHHHHHHHh
Confidence                               234579999999999999888774   89999999999999864321 11 1111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                       ..+.     ..+.+++|+|+++++++.....  .| .+++.++
T Consensus       228 -~~p~-----~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdgg  265 (285)
T 2p91_A          228 -VNPF-----GKPITIEDVGDTAVFLCSDWARAITGEVVHVDNG  265 (285)
T ss_dssp             -HSTT-----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -cCCC-----CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECCC
Confidence             1112     2578999999999999964322  34 4666554

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.1e-26  Score=190.15  Aligned_cols=220  Identities=16%  Similarity=0.163  Sum_probs=147.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +... ...++...+.++.++.+|++|.++++++++ 
T Consensus        28 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  100 (280)
T 4da9_A           28 ARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDA-------EGVAPVIAELSGLGARVIFLRADLADLSSHQATVDA  100 (280)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCH-------HHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHH
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            3578999999999999999999999999999997541       2111 111221223579999999999998888876 


Q ss_pred             ------CCCEEEEecccCC--C-----CCCChHHHHHHHHHHHHHHHHHHHHhc----C--CccEEEEeccceeeeccCC
Q 023244           82 ------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSCLKS----G--TVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        82 ------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~~v~~SS~~~~~~~~~  142 (285)
                            .+|+|||+||...  .     ...+.++..+++|+.++.++++++.+.    +  ..++||++||..++.+.  
T Consensus       101 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~--  178 (280)
T 4da9_A          101 VVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTS--  178 (280)
T ss_dssp             HHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------
T ss_pred             HHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCC--
Confidence                  6899999999832  1     112233578889999999888887543    1  13589999998865433  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++.........    .....
T Consensus       179 --------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~~  234 (280)
T 4da9_A          179 --------------------PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKY----DGLIE  234 (280)
T ss_dssp             ---------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------
T ss_pred             --------------------CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhH----HHHHh
Confidence                                23467999999999999999887   4899999999999988543211111    11111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ....+.     ..+.+++|+|+++++++.....  .| .++++++
T Consensus       235 ~~~~p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (280)
T 4da9_A          235 SGLVPM-----RRWGEPEDIGNIVAGLAGGQFGFATGSVIQADGG  274 (280)
T ss_dssp             ------------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEESTT
T ss_pred             hcCCCc-----CCcCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            111222     3688999999999999976542  34 4666654

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=3e-26  Score=185.52  Aligned_cols=195  Identities=25%  Similarity=0.240  Sum_probs=139.5

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|+|+||||+|+||++++++|+++|++|++++|+.        +....+. +.    .++.++.+|++|.+++.++
T Consensus         1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   68 (234)
T 2ehd_A            1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDE--------KRLQALAAEL----EGALPLPGDVREEGDWARA   68 (234)
T ss_dssp             ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS----TTCEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh----hhceEEEecCCCHHHHHHH
Confidence            776778999999999999999999999999999999976        2222222 22    1678899999999988877


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+||.....     ..+..+..+++|+.++.++++.    +++.+ .++||++||..++...   
T Consensus        69 ~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~---  144 (234)
T 2ehd_A           69 VAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPF---  144 (234)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCC---
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCC---
Confidence            75       579999999975431     1223358899999998765555    45555 7899999998754322   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.+|.+.+.+.+.++.+   .|++++++|||.+.++.....            ..
T Consensus       145 -------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~------------~~  193 (234)
T 2ehd_A          145 -------------------KGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT------------PG  193 (234)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------
T ss_pred             -------------------CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc------------cc
Confidence                               23467999999999998888766   489999999999987642110            00


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                         .+      .+++++|+|+++++++..+.
T Consensus       194 ---~~------~~~~~~dvA~~~~~l~~~~~  215 (234)
T 2ehd_A          194 ---QA------WKLKPEDVAQAVLFALEMPG  215 (234)
T ss_dssp             -------------CCHHHHHHHHHHHHHSCC
T ss_pred             ---cc------CCCCHHHHHHHHHHHhCCCc
Confidence               01      25799999999999998754

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.94  E-value=1.6e-26  Score=192.90  Aligned_cols=220  Identities=15%  Similarity=0.116  Sum_probs=160.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+..       +......+ ....+.++.++.+|++|.++++++++ 
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  118 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEE-------GDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQE  118 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999999861       11111111 11224578999999999998888776 


Q ss_pred             ------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||.....      ..+.++..+++|+.++.++++++.+.- +.++||++||..++.+.        
T Consensus       119 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------  190 (291)
T 3ijr_A          119 TVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN--------  190 (291)
T ss_dssp             HHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC--------
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC--------
Confidence                  579999999975421      223345889999999999999998752 24699999998865433        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    ++...|+.||.+.+.+.+.++.++   |+++++++||.|++|.......   ... ........+ 
T Consensus       191 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~-~~~~~~~~p-  251 (291)
T 3ijr_A          191 --------------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD---EKK-VSQFGSNVP-  251 (291)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC---HHH-HHHTTTTST-
T ss_pred             --------------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC---HHH-HHHHHccCC-
Confidence                          234679999999999999998875   8999999999999874211110   000 111122222 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          ...+.+++|+|+++++++....  ..| .++++++
T Consensus       252 ----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  286 (291)
T 3ijr_A          252 ----MQRPGQPYELAPAYVYLASSDSSYVTGQMIHVNGG  286 (291)
T ss_dssp             ----TSSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             ----CCCCcCHHHHHHHHHHHhCCccCCCcCCEEEECCC
Confidence                2378999999999999997543  234 4566654

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.94  E-value=5.6e-27  Score=193.26  Aligned_cols=227  Identities=16%  Similarity=0.140  Sum_probs=158.4

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+||||||+|+||++++++|+++|++|++++|+..       +......++. ..+.++.++.+|++|.++++++++
T Consensus        12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~-------~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~   84 (265)
T 1h5q_A           12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAA-------DAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQ   84 (265)
T ss_dssp             CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCT-------THHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcch-------hhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHH
Confidence            34689999999999999999999999999999999761       1111111110 012478899999999998888775


Q ss_pred             C-------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCc
Q 023244           82 G-------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ~-------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      .       +|+|||+||.....     ..+..+..+++|+.++.++++++.+.    +..++||++||..++......  
T Consensus        85 ~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~--  162 (265)
T 1h5q_A           85 QIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS--  162 (265)
T ss_dssp             HHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE--
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhcccccc--
Confidence            3       79999999975431     12233578999999999999987543    324799999998764332100  


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                          ..+         ..+...|+.||.+.+.+++.++.++   |++++++|||.++++......    ......... .
T Consensus       163 ----~~~---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~-~  224 (265)
T 1h5q_A          163 ----LNG---------SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD----KKIRDHQAS-N  224 (265)
T ss_dssp             ----TTE---------ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHH-T
T ss_pred             ----ccc---------cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccc----hhHHHHHHh-c
Confidence                000         1235679999999999999988774   899999999999998533211    111111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+.     ..+++++|+|+++++++..+.  ..| .++++++
T Consensus       225 ~~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG  261 (265)
T 1h5q_A          225 IPL-----NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  261 (265)
T ss_dssp             CTT-----SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             Ccc-----cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence            111     268999999999999997542  234 5677665

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.94  E-value=1.9e-26  Score=189.63  Aligned_cols=220  Identities=14%  Similarity=0.091  Sum_probs=155.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEec-CCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++| +.        +.... ..++...+.++.++.+|++|.+++.++++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~--------~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~   77 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE--------DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCCh--------HHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence            4689999999999999999999999999999999 43        22111 11111113468899999999998888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.    +..++||++||..++...     
T Consensus        78 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~-----  152 (261)
T 1gee_A           78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-----  152 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCC-----
Confidence                   689999999976431     12233578999999999888876543    214799999998754221     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+++.++.++   |++++++|||.+++|.......  .......... .
T Consensus       153 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~-~  212 (261)
T 1gee_A          153 -----------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRADVES-M  212 (261)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHHHHHT-T
T ss_pred             -----------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc--ChhHHHHHHh-c
Confidence                             345679999999999998888764   8999999999999985321000  0111111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+     ...+++++|+|+++++++....  ..| .++++++
T Consensus       213 ~~-----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg  249 (261)
T 1gee_A          213 IP-----MGYIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             CT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCcCHHHHHHHHHHHhCccccCCCCcEEEEcCC
Confidence            11     2368999999999999997432  234 4666654

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.94  E-value=3.7e-26  Score=186.13  Aligned_cols=198  Identities=14%  Similarity=0.118  Sum_probs=151.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGF   76 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~   76 (285)
                      +|+|+||||+|+||++++++|+++|+       +|++++|+.        +....+ .++...+.++.++.+|++|.+++
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   73 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA--------ADLEKISLECRAEGALTDTITADISDMADV   73 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH--------HHHHHHHHHHHTTTCEEEEEECCTTSHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCH--------HHHHHHHHHHHccCCeeeEEEecCCCHHHH
Confidence            57899999999999999999999999       999999976        222221 11111234788999999999988


Q ss_pred             HHHhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeecc
Q 023244           77 DAAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        77 ~~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~  140 (285)
                      .++++       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .++||++||..++...
T Consensus        74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~  152 (244)
T 2bd0_A           74 RRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF  152 (244)
T ss_dssp             HHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC
T ss_pred             HHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCC
Confidence            88876       589999999976431     1223358899999999999888743    34 6899999998765322


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            ++...|+.||.+.+.+++.++.+   .|++++++|||.+++|..... ..        
T Consensus       153 ----------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~--------  201 (244)
T 2bd0_A          153 ----------------------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-DD--------  201 (244)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-CS--------
T ss_pred             ----------------------CCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-cc--------
Confidence                                  23467999999999999888765   489999999999999864321 10        


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                         . .      ...+++++|+|+++++++..+..
T Consensus       202 ---~-~------~~~~~~~~dva~~~~~l~~~~~~  226 (244)
T 2bd0_A          202 ---E-M------QALMMMPEDIAAPVVQAYLQPSR  226 (244)
T ss_dssp             ---T-T------GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             ---c-c------cccCCCHHHHHHHHHHHHhCCcc
Confidence               0 0      12689999999999999986643

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.94  E-value=4.2e-26  Score=189.16  Aligned_cols=216  Identities=18%  Similarity=0.159  Sum_probs=155.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEec-CCCCccccCccchhhh-hcCCCC-CCCEEEEecCCCCh----hhHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR-SELDPEHRNSKDLSFL-KNLPGA-SERLRIFHADLSHP----DGFD   77 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~Dl~d~----~~~~   77 (285)
                      +|++|||||+|+||++++++|+++|++|++++| +.        +....+ .++... +.++.++.+|++|.    ++++
T Consensus        11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~   82 (276)
T 1mxh_A           11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE--------GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCE   82 (276)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCh--------HHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHH
Confidence            578999999999999999999999999999999 54        222211 111000 23788999999999    8888


Q ss_pred             HHhc-------CCCEEEEecccCCCC-----CC-----------ChHHHHHHHHHHHHHHHHHHHHhcC--Cc------c
Q 023244           78 AAIA-------GCTGVLHVATPVDFE-----DK-----------EPEEVITQRAINGTLGILKSCLKSG--TV------K  126 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~  126 (285)
                      ++++       .+|+|||+||.....     ..           +.++..+++|+.++.++++++.+.-  ..      +
T Consensus        83 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g  162 (276)
T 1mxh_A           83 DIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNL  162 (276)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCE
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCc
Confidence            8776       589999999975431     11           3335789999999999999987741  13      7


Q ss_pred             EEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCC
Q 023244          127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI  203 (285)
Q Consensus       127 ~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~  203 (285)
                      +||++||..++...                      ++...|+.||.+.+.+.+.++.++   |+++++++||.+++| .
T Consensus       163 ~iv~isS~~~~~~~----------------------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~  219 (276)
T 1mxh_A          163 SVVNLCDAMTDLPL----------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P  219 (276)
T ss_dssp             EEEEECCGGGGSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S
T ss_pred             EEEEECchhhcCCC----------------------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c
Confidence            99999998765332                      234679999999999999988775   899999999999998 2


Q ss_pred             CCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          204 CPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                        ...   .......... .+..    +++++++|+|+++++++.....  .| .++++++
T Consensus       220 --~~~---~~~~~~~~~~-~p~~----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG  270 (276)
T 1mxh_A          220 --AMP---QETQEEYRRK-VPLG----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  270 (276)
T ss_dssp             --SSC---HHHHHHHHTT-CTTT----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --cCC---HHHHHHHHhc-CCCC----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence              111   1111222111 1211    2389999999999999975432  34 4666655

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=7.2e-26  Score=184.49  Aligned_cols=215  Identities=18%  Similarity=0.154  Sum_probs=156.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+|+++||||+|+||++++++|+++|++|++++|+.        +....+.+..    ++.++.+|++|.+++++++
T Consensus         1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~   68 (245)
T 1uls_A            1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE--------GPLREAAEAV----GAHPVVMDVADPASVERGF   68 (245)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT----TCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc----CCEEEEecCCCHHHHHHHH
Confidence            665678999999999999999999999999999999976        3333222211    3778899999999888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.    + .++||++||.. ..+.    
T Consensus        69 ~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~----  142 (245)
T 1uls_A           69 AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGN----  142 (245)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCC----
Confidence            6       379999999975431     12233588999999999998887543    4 68999999987 4322    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||...+.+.+.++.+.   |+++++++||.+.++.... ...   .........
T Consensus       143 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~---~~~~~~~~~  200 (245)
T 1uls_A          143 ------------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPE---KVREKAIAA  200 (245)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCH---HHHHHHHHT
T ss_pred             ------------------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCH---HHHHHHHhh
Confidence                              234579999999999998888764   8999999999998875332 111   111111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       .+.     ..+++++|+|+++++++....  ..|. +.+.++
T Consensus       201 -~p~-----~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  237 (245)
T 1uls_A          201 -TPL-----GRAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (245)
T ss_dssp             -CTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCC-----CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence             111     258999999999999997542  2354 556554

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.94  E-value=8e-26  Score=186.77  Aligned_cols=219  Identities=16%  Similarity=0.110  Sum_probs=158.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++++..       +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAA-------ERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            5689999999999999999999999999999977651       11111 11111224578899999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+. ...+++|++||.......         
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~---------  173 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP---------  173 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC---------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC---------
Confidence                  689999999975431     12233588999999999999998765 225799999997543221         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                  .++...|+.||.+.+.+.+.++.++   |+++++++||.|.++..... ........   ..  .+. 
T Consensus       174 ------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~~~~~~---~~--~~~-  234 (271)
T 3v2g_A          174 ------------WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD-GDHAEAQR---ER--IAT-  234 (271)
T ss_dssp             ------------STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSS-CSSHHHHH---HT--CTT-
T ss_pred             ------------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCccccc-chhHHHHH---hc--CCC-
Confidence                        1334679999999999999988775   89999999999999864332 12221111   11  112 


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          ..+..++|+|+++++++....  ..| .++++++
T Consensus       235 ----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  268 (271)
T 3v2g_A          235 ----GSYGEPQDIAGLVAWLAGPQGKFVTGASLTIDGG  268 (271)
T ss_dssp             ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCHHHHHHHHHHHhCcccCCccCCEEEeCcC
Confidence                268899999999999996432  234 4566654

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.94  E-value=2.1e-26  Score=188.33  Aligned_cols=208  Identities=15%  Similarity=0.097  Sum_probs=143.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++
T Consensus         5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   76 (252)
T 3h7a_A            5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG--------EKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLN   76 (252)
T ss_dssp             CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHH
Confidence            4568999999999999999999999999999999987        22221 11221123578999999999999988886


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||....     ...+..+..+++|+.++.++++++.    +.+ .++||++||..++.+.      
T Consensus        77 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  149 (252)
T 3h7a_A           77 AADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGG------  149 (252)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCC------
T ss_pred             HHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCC------
Confidence                  57999999997553     1122335889999999988888763    444 5799999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcE-EEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDL-VTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~-~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                      +....|+.||.+.+.+.+.++.++   |+++ ++++||.+.++..........    ... ...
T Consensus       150 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~----~~~-~~~  208 (252)
T 3h7a_A          150 ----------------SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF----GKD-ALA  208 (252)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh----hhh-hhc
Confidence                            234679999999999999988774   7999 899999998875332211110    000 000


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                           ... .+++++|+|+++++++..+..
T Consensus       209 -----~~~-~~~~pedvA~~~~~l~s~~~~  232 (252)
T 3h7a_A          209 -----NPD-LLMPPAAVAGAYWQLYQQPKS  232 (252)
T ss_dssp             -----------CCHHHHHHHHHHHHHCCGG
T ss_pred             -----CCc-cCCCHHHHHHHHHHHHhCchh
Confidence                 112 389999999999999987654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.94  E-value=1.2e-26  Score=191.93  Aligned_cols=220  Identities=17%  Similarity=0.199  Sum_probs=150.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+||||||+|+||++++++|+++|++|+++.+...       +....+ ..+.....++.++.+|++|.++++++++  
T Consensus        26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   98 (272)
T 4e3z_A           26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANR-------EAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAV   98 (272)
T ss_dssp             SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCh-------hHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            578999999999999999999999999988744330       222111 1111123478999999999998888776  


Q ss_pred             -----CCCEEEEecccCCC-C-----CCChHHHHHHHHHHHHHHHHHHHHhc------CCccEEEEeccceeeeccCCCC
Q 023244           82 -----GCTGVLHVATPVDF-E-----DKEPEEVITQRAINGTLGILKSCLKS------GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                           .+|+|||+||.... .     ..+..+..+++|+.++.++++++.+.      +..++||++||..++.+..   
T Consensus        99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---  175 (272)
T 4e3z_A           99 DRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSA---  175 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCT---
T ss_pred             HHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCC---
Confidence                 57999999998653 1     12233588999999999998887543      1256899999987654331   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+++.++.++   |+++++++||.|.++.....   ......... ..
T Consensus       176 ------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~-~~  233 (272)
T 4e3z_A          176 ------------------TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG---GLPDRAREM-AP  233 (272)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc---CChHHHHHH-hh
Confidence                              123569999999999999988775   89999999999999853321   011111111 11


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       234 ~~~-----~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdgG  271 (272)
T 4e3z_A          234 SVP-----MQRAGMPEEVADAILYLLSPSASYVTGSILNVSGG  271 (272)
T ss_dssp             CCT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC-----cCCCcCHHHHHHHHHHHhCCccccccCCEEeecCC
Confidence            111     2367889999999999996543  234 5677654

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.94  E-value=5.7e-27  Score=197.25  Aligned_cols=229  Identities=17%  Similarity=0.146  Sum_probs=157.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCc-cchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNS-KDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ||+|+||||||+||++++++|+++|++|++++|++...  ... ++...+..+.  ..+++++.+|++|++++.++++++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~~   77 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITA--ANPETKEELIDNYQ--SLGVILLEGDINDHETLVKAIKQV   77 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCS--SCHHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCccc--CChHHHHHHHHHHH--hCCCEEEEeCCCCHHHHHHHHhCC
Confidence            57899999999999999999999999999999975100  000 1111111110  126889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+++...              +.++.++++++++.+.+++||+ |+   ++...      +|..+.        .+
T Consensus        78 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~~------~~~~~~--------~p  125 (307)
T 2gas_A           78 DIVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-SE---FGLDV------DRHDAV--------EP  125 (307)
T ss_dssp             SEEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-SC---CSSCT------TSCCCC--------TT
T ss_pred             CEEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-cc---cccCc------ccccCC--------Cc
Confidence            99999998643              3456789999998865889983 33   32111      121211        11


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cccCcceeeHHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLLNTSMVHVDDVAR  241 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~  241 (285)
                      ....| .+|..+|.+++    +.+++++++||+.++++..........    .........+.  .+..++|++++|+|+
T Consensus       126 ~~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~Dva~  196 (307)
T 2gas_A          126 VRQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQLDA----TDPPRDKVVILGDGNVKGAYVTEADVGT  196 (307)
T ss_dssp             HHHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCTTC----SSCCSSEEEEETTSCSEEEEECHHHHHH
T ss_pred             chhHH-HHHHHHHHHHH----HcCCCeEEEEcceeecccccccccccc----ccCCCCeEEEecCCCcceEEeeHHHHHH
Confidence            13569 99999998875    358999999999998864321110000    00011111111  245679999999999


Q ss_pred             HHHHhhcCCCCCc-eEE-Eec-cccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDAKG-RYI-CSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~~~-~~~-~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      ++..++.++...+ .++ .++ +.+|+.|+++.+.+.+|+
T Consensus       197 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  236 (307)
T 2gas_A          197 FTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK  236 (307)
T ss_dssp             HHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence            9999998765434 455 444 689999999999999885

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=99.94  E-value=3.8e-26  Score=188.33  Aligned_cols=221  Identities=16%  Similarity=0.166  Sum_probs=153.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++++..       +....+. .....+.++.++.+|++|.++++++++
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~   97 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA-------AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFA   97 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            34689999999999999999999999999998866541       2222111 111123478899999999998888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++.+. ...+++|++||..+....        
T Consensus        98 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  169 (267)
T 3u5t_A           98 TAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH--------  169 (267)
T ss_dssp             HHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC--------
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC--------
Confidence                   579999999986531     12223578899999999999988764 113689999998764332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.||.+.+.+.+.++.++   |+++++++||.+.++.........   ...... ...+ 
T Consensus       170 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~-~~~p-  230 (267)
T 3u5t_A          170 --------------PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDE---VRDRFA-KLAP-  230 (267)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHH-TSST-
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHH---HHHHHH-hcCC-
Confidence                          334679999999999999999885   799999999999887532211110   011111 1122 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                          ...+.+++|+|+++++++.....  .|. ++++++
T Consensus       231 ----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  265 (267)
T 3u5t_A          231 ----LERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG  265 (267)
T ss_dssp             ----TCSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred             ----CCCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence                23689999999999999975542  454 556654

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.94  E-value=3.4e-26  Score=188.83  Aligned_cols=212  Identities=16%  Similarity=0.145  Sum_probs=155.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+..        ..         ...+..+.+|++|.+++.++++  
T Consensus        13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~--------~~---------~~~~~~~~~Dv~~~~~v~~~~~~~   75 (269)
T 3vtz_A           13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEK--------SD---------VNVSDHFKIDVTNEEEVKEAVEKT   75 (269)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC----------C---------TTSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch--------hc---------cCceeEEEecCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999999999871        11         1256788999999998888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++...       
T Consensus        76 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  147 (269)
T 3vtz_A           76 TKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAAT-------  147 (269)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBC-------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC-------
Confidence                 589999999985541     1222357889999999998888654    44 6799999998865433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCC-------CCccHHHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPK-------FAGSVRSSLALI  218 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~~~~~~  218 (285)
                                     ++...|+.||.+.+.+.+.++.++  ++++++++||.|.++.....       ............
T Consensus       148 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  212 (269)
T 3vtz_A          148 ---------------KNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW  212 (269)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHH
T ss_pred             ---------------CCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHH
Confidence                           334679999999999999999887  79999999999998742110       000001111111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       ....+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       213 -~~~~p-----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  252 (269)
T 3vtz_A          213 -GRQHP-----MGRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG  252 (269)
T ss_dssp             -HHHST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -HhcCC-----CCCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence             11111     2378999999999999997543  234 5677665

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=5.7e-26  Score=185.23  Aligned_cols=218  Identities=15%  Similarity=0.146  Sum_probs=155.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+.+.    .++.++.+|++|.++++++++  
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~   72 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE--------SKLQELEKY----PGIQTRVLDVTKKKQIDQFANEV   72 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHGGGGGS----TTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHhc----cCceEEEeeCCCHHHHHHHHHHh
Confidence            468999999999999999999999999999999976        333222222    268899999999998887754  


Q ss_pred             -CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcccccCC
Q 023244           82 -GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        82 -~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++...+          
T Consensus        73 ~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~----------  141 (246)
T 2ag5_A           73 ERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGV----------  141 (246)
T ss_dssp             SCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCC----------
T ss_pred             CCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCC----------
Confidence             589999999975531     1223357889999999999888753    44 68999999987543220          


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC--ccHHHHHHHHhcCccccc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA--GSVRSSLALILGNREEYG  226 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~~~~~~~~~~  226 (285)
                                 .+...|+.||.+.+.+.+.++.+.   |++++++|||.+++|.......  ............ ..+  
T Consensus       142 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~--  207 (246)
T 2ag5_A          142 -----------VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-RQK--  207 (246)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-TCT--
T ss_pred             -----------CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHh-cCC--
Confidence                       134679999999999999988774   8999999999999974211000  000111111111 111  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                         ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       208 ---~~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdgG  242 (246)
T 2ag5_A          208 ---TGRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (246)
T ss_dssp             ---TSSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             ---CCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence               1268999999999999996543  235 4556554

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=99.94  E-value=9.1e-27  Score=192.32  Aligned_cols=217  Identities=15%  Similarity=0.144  Sum_probs=157.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +....+ ..+...+.++.++.+|++|.++++++++ 
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   98 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTE--------AGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVES   98 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHH
Confidence            467999999999999999999999999999999976        222211 1111113467889999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.      
T Consensus        99 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  171 (270)
T 3ftp_A           99 TLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGN------  171 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC------
Confidence                  589999999975531     1223358899999999999988753    34 5799999998765433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++..... .   ....... ....
T Consensus       172 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~---~~~~~~~-~~~~  230 (270)
T 3ftp_A          172 ----------------PGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL-P---QEQQTAL-KTQI  230 (270)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS-C---HHHHHHH-HTTC
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc-C---HHHHHHH-HhcC
Confidence                            33467999999999999988877   489999999999988742211 0   1111111 1122


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      +.     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       231 p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  266 (270)
T 3ftp_A          231 PL-----GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNGG  266 (270)
T ss_dssp             TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCCHHHHHHHHHHHhCCCcCCccCcEEEECCC
Confidence            22     368999999999999996433  234 5667664

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.94  E-value=1.7e-26  Score=189.94  Aligned_cols=222  Identities=15%  Similarity=0.145  Sum_probs=153.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccc-hhhh-hcCCCC-CCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFL-KNLPGA-SERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +. ...+ .++... +.++.++.+|++|.+++++++
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   74 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGD--------AAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLV   74 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSC--------HHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc--------chHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHH
Confidence            468999999999999999999999999999999986        22 2111 111100 236888999999999888887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.    
T Consensus        75 ~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----  149 (260)
T 1x1t_A           75 DNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS----  149 (260)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC----
T ss_pred             HHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCC----
Confidence            6       589999999975431     122335889999999999888774    344 6899999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHH-------HH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVR-------SS  214 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~-------~~  214 (285)
                                        ++...|+.||.+.+.+.+.++.++   |+++++++||.+.+|...........       ..
T Consensus       150 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  211 (260)
T 1x1t_A          150 ------------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETA  211 (260)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------
T ss_pred             ------------------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHH
Confidence                              234679999999999999988774   89999999999999853321110000       00


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ........     .....+.+++|+|+++++++....  ..| .++++++
T Consensus       212 ~~~~~~~~-----~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG  256 (260)
T 1x1t_A          212 ARELLSEK-----QPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             ---CHHHH-----CTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhhcc-----CCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence            00000000     112368999999999999997532  234 4666654

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=99.94  E-value=5.6e-27  Score=193.68  Aligned_cols=219  Identities=12%  Similarity=0.093  Sum_probs=158.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +... ...++...+.++.++.+|++|.+++.++++ 
T Consensus        25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   96 (271)
T 4ibo_A           25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDP--------SRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFAR   96 (271)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH--------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999876        2222 122222223578999999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||.....+.      
T Consensus        97 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~------  169 (271)
T 4ibo_A           97 LDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELAR------  169 (271)
T ss_dssp             HHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBC------
T ss_pred             HHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCC------
Confidence                  589999999975431     2223358899999999999777644    34 5799999998764332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++........  ........ ...
T Consensus       170 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~~  230 (271)
T 4ibo_A          170 ----------------ATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDN--PEFDAWVK-ART  230 (271)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHC--HHHHHHHH-HHS
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccC--HHHHHHHH-hcC
Confidence                            34467999999999999998877   489999999999998742211000  01111111 111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      +     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       231 p-----~~r~~~pedva~~v~~L~s~~~~~itG~~i~vdGG  266 (271)
T 4ibo_A          231 P-----AKRWGKPQELVGTAVFLSASASDYVNGQIIYVDGG  266 (271)
T ss_dssp             T-----TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCccccCCCCcEEEECCC
Confidence            2     2368899999999999987543  234 4667654

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=99.94  E-value=4e-26  Score=189.06  Aligned_cols=219  Identities=16%  Similarity=0.211  Sum_probs=159.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~  102 (276)
T 3r1i_A           31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHS--------DALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ  102 (276)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            568999999999999999999999999999999976        22222 11221223478899999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+...++|++||...+....     
T Consensus       103 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~-----  177 (276)
T 3r1i_A          103 MTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINI-----  177 (276)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCC-----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCC-----
Confidence                  689999999986541     1223357889999999999888754    33237899999987543221     


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     .++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++..... ...    .... ....
T Consensus       178 ---------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~~----~~~~-~~~~  236 (276)
T 3r1i_A          178 ---------------PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-ADY----HALW-EPKI  236 (276)
T ss_dssp             ---------------SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-GGG----HHHH-GGGS
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-hHH----HHHH-HhcC
Confidence                           123467999999999999999887   489999999999998854321 111    1111 1112


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ++     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       237 p~-----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  272 (276)
T 3r1i_A          237 PL-----GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG  272 (276)
T ss_dssp             TT-----SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence            22     368999999999999997543  234 4566665

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.94  E-value=1.1e-26  Score=196.53  Aligned_cols=221  Identities=17%  Similarity=0.132  Sum_probs=157.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |+|+|+||||||+||++++++|+++|++|++++|++.       .....+..+.  ..+++++.+|++|++++.++++++
T Consensus        10 m~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~-------~~~~~~~~l~--~~~v~~v~~Dl~d~~~l~~a~~~~   80 (318)
T 2r6j_A           10 MKSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS-------SKTTLLDEFQ--SLGAIIVKGELDEHEKLVELMKKV   80 (318)
T ss_dssp             CCCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC-------SCHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             CCCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC-------chhhHHHHhh--cCCCEEEEecCCCHHHHHHHHcCC
Confidence            3458999999999999999999999999999999871       1222111110  126889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+++...              +.+++++++++++.+.+++||+ |+   ++..      .+|..+..        +
T Consensus        81 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~~--------p  128 (318)
T 2r6j_A           81 DVVISALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-SD---FGVE------EDRINALP--------P  128 (318)
T ss_dssp             SEEEECCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-SC---CSSC------TTTCCCCH--------H
T ss_pred             CEEEECCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-ec---cccC------cccccCCC--------C
Confidence            99999998642              3456789999998865889985 43   2211      12222110        1


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH-HhcCccccc--cccCcceeeHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL-ILGNREEYG--FLLNTSMVHVDDVA  240 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~i~~~D~a  240 (285)
                      ....| .+|..+|.+++    +.+++++++||+.++++.        +..+... .......+.  .+..++|++++|+|
T Consensus       129 ~~~~y-~sK~~~e~~~~----~~~~~~~~lr~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  195 (318)
T 2r6j_A          129 FEALI-ERKRMIRRAIE----EANIPYTYVSANCFASYF--------INYLLRPYDPKDEITVYGTGEAKFAMNYEQDIG  195 (318)
T ss_dssp             HHHHH-HHHHHHHHHHH----HTTCCBEEEECCEEHHHH--------HHHHHCTTCCCSEEEEETTSCCEEEEECHHHHH
T ss_pred             cchhH-HHHHHHHHHHH----hcCCCeEEEEcceehhhh--------hhhhccccCCCCceEEecCCCceeeEeeHHHHH
Confidence            12458 99999998875    368999999999887641        1111111 111111121  24578999999999


Q ss_pred             HHHHHhhcCCCC-CceEE-Ee-ccccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPDA-KGRYI-CS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~~-~~~~~-~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++..++.++.. ++.++ .+ ++.+|+.|+++.+++.+|+
T Consensus       196 ~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~  236 (318)
T 2r6j_A          196 LYTIKVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK  236 (318)
T ss_dssp             HHHHHHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence            999999987654 34555 44 4689999999999999886

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.94  E-value=9.4e-26  Score=185.75  Aligned_cols=211  Identities=17%  Similarity=0.134  Sum_probs=153.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+||||||+|+||++++++|+++|++|++++|+..        .          ..++.++.+|++|.++++++++  
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~----------~~~~~~~~~Dl~~~~~v~~~~~~~   68 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDP--------G----------EAKYDHIECDVTNPDQVKASIDHI   68 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCC--------C----------SCSSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcc--------c----------CCceEEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999871        1          2367889999999998888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ .++||++||..++...       
T Consensus        69 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  140 (264)
T 2dtx_A           69 FKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIIT-------  140 (264)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCC-------
Confidence                 589999999975431     1223358899999998888888754    34 6899999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC--CcEEEeccCceecCCCCCCCC----ccHH---HHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFA----GSVR---SSLALI  218 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--i~~~i~Rp~~v~g~~~~~~~~----~~~~---~~~~~~  218 (285)
                                     ++...|+.||.+.+.+.+.++.+++  +++++++||.+.++.......    ....   ......
T Consensus       141 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  205 (264)
T 2dtx_A          141 ---------------KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEW  205 (264)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHH
Confidence                           2346799999999999999988765  999999999998763111000    0000   000000


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      . ...+     ...+++++|+|+++++++....  ..| .+++.++
T Consensus       206 ~-~~~p-----~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  245 (264)
T 2dtx_A          206 G-HEHP-----MQRIGKPQEVASAVAFLASREASFITGTCLYVDGG  245 (264)
T ss_dssp             H-HHST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             H-hcCC-----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            0 0111     2368999999999999997542  234 4566554

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.94  E-value=3e-26  Score=188.50  Aligned_cols=223  Identities=15%  Similarity=0.079  Sum_probs=151.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+..+|+++||||+|+||++++++|+++|++|++++|+.        +....+...  ...++.++.+|++|.+++++++
T Consensus         5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~   74 (261)
T 3n74_A            5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK--------AGAERVAGE--IGDAALAVAADISKEADVDAAV   74 (261)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH--HCTTEEEEECCTTSHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHH--hCCceEEEEecCCCHHHHHHHH
Confidence            455678999999999999999999999999999999986        333222211  1347899999999999888887


Q ss_pred             c-------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhcC-------CccEEEEeccceeeecc
Q 023244           81 A-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKSG-------TVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~v~~SS~~~~~~~  140 (285)
                      +       .+|+|||+||.....      ..+..+..+++|+.++.++++++.+.-       ...++|++||...+...
T Consensus        75 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~  154 (261)
T 3n74_A           75 EAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPR  154 (261)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCC
T ss_pred             HHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCC
Confidence            6       579999999976521      223335789999999888888764331       13479999998754332


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            +....|+.||.+.+.+.+.++.+   .|+++++++||.+.++................
T Consensus       155 ----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  212 (261)
T 3n74_A          155 ----------------------PNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKK  212 (261)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------
T ss_pred             ----------------------CCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHH
Confidence                                  33467999999999999999887   48999999999999885433211111111111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      . ....+     ...+++++|+|+++++++....  ..| .++++++
T Consensus       213 ~-~~~~~-----~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  253 (261)
T 3n74_A          213 F-RDSIP-----MGRLLKPDDLAEAAAFLCSPQASMITGVALDVDGG  253 (261)
T ss_dssp             -----CT-----TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             H-hhcCC-----cCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecCC
Confidence            1 11112     2378999999999999996433  234 4667654

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.94  E-value=2.7e-26  Score=187.96  Aligned_cols=212  Identities=17%  Similarity=0.115  Sum_probs=153.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++   +.++.++.+|++|.++++++++ 
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~   72 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD--------EEGAATAREL---GDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        322222 222   2368889999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHH----HHHHHhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGI----LKSCLKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++    ++.+++.+ .++||++||..++.+.      
T Consensus        73 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  145 (254)
T 1hdc_A           73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL------  145 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCC------
Confidence                  689999999975431     1223358899999998754    45555556 6899999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC-c
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN-R  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~-~  222 (285)
                                      ++...|+.||.+.+.+.+.++.++   |++++++|||.++++....            .... .
T Consensus       146 ----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------~~~~~~  197 (254)
T 1hdc_A          146 ----------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE------------TGIRQG  197 (254)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH------------HTCCCS
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc------------cchhHH
Confidence                            234679999999999999988774   8999999999999873110            0000 0


Q ss_pred             cccc-cccCccee-eHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYG-FLLNTSMV-HVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~-~~~~~~~i-~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+. ......+. +++|+|+++++++..+.  ..| .+++.++
T Consensus       198 ~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG  241 (254)
T 1hdc_A          198 EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             TTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECCC
Confidence            0000 01122577 99999999999997542  234 4566654

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=99.94  E-value=8e-26  Score=185.23  Aligned_cols=220  Identities=19%  Similarity=0.136  Sum_probs=160.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +....+.+.  .+.++.++.+|++|.++++++++  
T Consensus         7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (255)
T 4eso_A            7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE--------SNIARIREE--FGPRVHALRSDIADLNEIAVLGAAA   76 (255)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH--HGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHH--hCCcceEEEccCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999986        332222211  12378999999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                           .+|++||+||.....     ..+.++..+++|+.++.++++++.+. ...++||++||..++.+.          
T Consensus        77 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------  146 (255)
T 4eso_A           77 GQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH----------  146 (255)
T ss_dssp             HHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC----------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC----------
Confidence                 579999999986531     22333588999999999999999764 113689999998865433          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC-CCccH-HHHHHHHhcCcccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-FAGSV-RSSLALILGNREEY  225 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~-~~~~~-~~~~~~~~~~~~~~  225 (285)
                                  ++...|+.||.+.+.+.+.++.++   |+++++++||.+.+|..... ..... ..+... .....+.
T Consensus       147 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~-~~~~~p~  213 (255)
T 4eso_A          147 ------------PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTL-GDNITPM  213 (255)
T ss_dssp             ------------TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHH-HHHHSTT
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHH-HhccCCC
Confidence                        345679999999999999998875   89999999999999854321 11111 111111 1111222


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCC-CCCc-eEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYP-DAKG-RYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~-~~~~~~~  261 (285)
                           ..+.+++|+|+++++++... ...| .++++++
T Consensus       214 -----~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGG  246 (255)
T 4eso_A          214 -----KRNGTADEVARAVLFLAFEATFTTGAKLAVDGG  246 (255)
T ss_dssp             -----SSCBCHHHHHHHHHHHHHTCTTCCSCEEEESTT
T ss_pred             -----CCCcCHHHHHHHHHHHcCcCcCccCCEEEECCC
Confidence                 36889999999999998752 1234 4666654

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.94  E-value=6.1e-27  Score=198.35  Aligned_cols=226  Identities=14%  Similarity=0.118  Sum_probs=157.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +||+|+||||||+||++++++|+++|++|++++|++.+.  ...++...+..+.  ..+++++.+|++|++++.++++++
T Consensus         3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~--~~~~~~~~l~~~~--~~~v~~v~~D~~d~~~l~~a~~~~   78 (321)
T 3c1o_A            3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPD--STPSSVQLREEFR--SMGVTIIEGEMEEHEKMVSVLKQV   78 (321)
T ss_dssp             -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTT--CCHHHHHHHHHHH--HTTCEEEECCTTCHHHHHHHHTTC
T ss_pred             cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccc--cChHHHHHHHHhh--cCCcEEEEecCCCHHHHHHHHcCC
Confidence            467899999999999999999999999999999975100  0001112121110  126889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      |+|||+++...              +.++.+++++|++.+.+++||+ |+   ++..      .+|..+..        +
T Consensus        79 d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S~---~g~~------~~~~~~~~--------p  126 (321)
T 3c1o_A           79 DIVISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-SD---FGCE------EDRIKPLP--------P  126 (321)
T ss_dssp             SEEEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-SC---CSSC------GGGCCCCH--------H
T ss_pred             CEEEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-cc---cccC------ccccccCC--------C
Confidence            99999998643              3456799999998865789983 32   2211      12222110        1


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHH----HhcCccccc--cccCcceeeHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL----ILGNREEYG--FLLNTSMVHVD  237 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~i~~~  237 (285)
                      ....| .+|..+|.+++    +.+++++++||+.++++..        ..+...    ..+......  .+..++|++++
T Consensus       127 ~~~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  193 (321)
T 3c1o_A          127 FESVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFV--------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEE  193 (321)
T ss_dssp             HHHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHH--------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred             cchHH-HHHHHHHHHHH----HcCCCeEEEEeceeccccc--------cccccccccccccCceEEecCCCcceeEeeHH
Confidence            13469 99999999885    3589999999999887521        111100    011111111  25568999999


Q ss_pred             HHHHHHHHhhcCCCCCc-eEEE-e-ccccCHHHHHHHHHhhCCC
Q 023244          238 DVARAHIFLLEYPDAKG-RYIC-S-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       238 D~a~~~~~~~~~~~~~~-~~~~-~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |+|+++..++.++...+ .|++ + ++.+|+.|+++.+.+.+|+
T Consensus       194 Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~  237 (321)
T 3c1o_A          194 DIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL  237 (321)
T ss_dssp             HHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence            99999999998765434 4654 4 4689999999999999885

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.94  E-value=3.3e-26  Score=190.12  Aligned_cols=219  Identities=16%  Similarity=0.107  Sum_probs=155.0

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccc-hhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+||||||+|+||++++++|+++|++|++++|+..     ..+. ...+...   +.++.++.+|++|.+++.++++
T Consensus        32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~-----~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~  103 (279)
T 3ctm_A           32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHP-----ADEKAEHLQKTY---GVHSKAYKCNISDPKSVEETIS  103 (279)
T ss_dssp             CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSC-----CHHHHHHHHHHH---CSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH-----HHHHHHHHHHhc---CCcceEEEeecCCHHHHHHHHH
Confidence            45689999999999999999999999999999999871     1111 1111111   2368899999999998888876


Q ss_pred             C-------CCEEEEecccCCC-C--C-C---ChHHHHHHHHHHH----HHHHHHHHHhcCCccEEEEeccceeeeccCCC
Q 023244           82 G-------CTGVLHVATPVDF-E--D-K---EPEEVITQRAING----TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 ~-------~d~vih~a~~~~~-~--~-~---~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       +|+|||+||.... .  . .   +..+..+++|+.+    ++.+++.+++.+ .++||++||..++....  
T Consensus       104 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--  180 (279)
T 3ctm_A          104 QQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNI--  180 (279)
T ss_dssp             HHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC----
T ss_pred             HHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCC--
Confidence            4       8999999997543 1  1 1   1234788999999    567777777776 78999999987543210  


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                        .++...|+.||.+.|.+++.++.++   + ++++++||.+.++..... .   ........ 
T Consensus       181 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~-~---~~~~~~~~-  236 (279)
T 3ctm_A          181 ------------------PQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA-S---KDMKAKWW-  236 (279)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC-C---HHHHHHHH-
T ss_pred             ------------------CCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc-C---hHHHHHHH-
Confidence                              1234679999999999999998874   6 999999999998854221 1   11111111 


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ...+.     ..+++++|+|+++++++....  ..| .++++++
T Consensus       237 ~~~p~-----~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG  275 (279)
T 3ctm_A          237 QLTPL-----GREGLTQELVGGYLYLASNASTFTTGSDVVIDGG  275 (279)
T ss_dssp             HHSTT-----CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HhCCc-----cCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence            11111     268999999999999997532  234 4667654

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=99.94  E-value=1.4e-26  Score=190.70  Aligned_cols=223  Identities=16%  Similarity=0.156  Sum_probs=158.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (264)
T 3ucx_A           10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTV--------ERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE   81 (264)
T ss_dssp             TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22222 11221224578999999999999888876 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++.+.-  ..++||++||..++...       
T Consensus        82 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  154 (264)
T 3ucx_A           82 TMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQ-------  154 (264)
T ss_dssp             HHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCC-------
T ss_pred             HHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCC-------
Confidence                  57999999987532      1122335889999999999998865321  02699999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC-------ccHHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA-------GSVRSSLAL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~~~~  217 (285)
                                     ++...|+.||.+.+.+.+.++.+   .|+++++++||.|++|.......       .........
T Consensus       155 ---------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  219 (264)
T 3ucx_A          155 ---------------AKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNA  219 (264)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred             ---------------CccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHH
Confidence                           33467999999999999998877   58999999999999874221100       000111111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSHT  262 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~~  262 (285)
                      . ....+     ...+.+++|+|+++++++....  ..| .++++++.
T Consensus       220 ~-~~~~p-----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~  261 (264)
T 3ucx_A          220 A-AAGSD-----LKRLPTEDEVASAILFMASDLASGITGQALDVNCGE  261 (264)
T ss_dssp             H-HTTSS-----SSSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             H-hccCC-----cccCCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence            1 11112     3378999999999999997543  234 46676653

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.94  E-value=6.4e-26  Score=187.17  Aligned_cols=218  Identities=14%  Similarity=0.143  Sum_probs=157.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+|+||||+|+||++++++|+++|++|+++.++..      ........++.....++.++.+|++|.+++.++++  
T Consensus        25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~   98 (267)
T 4iiu_A           25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDA------AGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHE   98 (267)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCch------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999988765431      11111122222224578999999999998888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH-----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL-----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                           .+|+|||+||.....     ..+..+..+++|+.++.++++++.     +.+ .++||++||..++.+.      
T Consensus        99 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------  171 (267)
T 4iiu_A           99 IAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVMGN------  171 (267)
T ss_dssp             HHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHHCC------
T ss_pred             HHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhccCC------
Confidence                 589999999986531     122335889999999999988863     333 6799999998765433      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.....    ...........  
T Consensus       172 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~--  229 (267)
T 4iiu_A          172 ----------------RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME----ESALKEAMSMI--  229 (267)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC----HHHHHHHHHTC--
T ss_pred             ----------------CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc----HHHHHHHHhcC--
Confidence                            344679999999998888888775   89999999999998864321    11111111111  


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      +     ...+.+++|+|+++.+++....  ..| .++++++
T Consensus       230 p-----~~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG  265 (267)
T 4iiu_A          230 P-----MKRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG  265 (267)
T ss_dssp             T-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence            2     2268899999999999997543  234 4566654

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=99.94  E-value=1.2e-25  Score=182.29  Aligned_cols=224  Identities=17%  Similarity=0.110  Sum_probs=160.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|+++||||++.||+.+++.|+++|.+|++++|+.        +.... .+++...+.++.++.+|++|+++++++
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~--------~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~   74 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLE--------DRLNQIVQELRGMGKEVLGVKADVSKKKDVEEF   74 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHH
Confidence            556789999999999999999999999999999999976        22222 222222345889999999999998888


Q ss_pred             hc-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCC
Q 023244           80 IA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      ++       .+|++||+||....      ...+.++..+++|+.++..+.+++.    +++ -.++|++||.....+.  
T Consensus        75 ~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~--  151 (254)
T 4fn4_A           75 VRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGG--  151 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSS--
T ss_pred             HHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCC--
Confidence            75       47999999996432      1222345899999999888777654    445 5799999998865333  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          +....|+.||.....+.+.++.++   ||+++.|.||.|-+|.........-... ....
T Consensus       152 --------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~-~~~~  210 (254)
T 4fn4_A          152 --------------------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGM-RTLT  210 (254)
T ss_dssp             --------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHH-HHHH
T ss_pred             --------------------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHH-HHHH
Confidence                                234679999999998888888774   8999999999998885433222111111 1111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      ....+..     .+..++|+|.++++++.....  .|. +.+.|+
T Consensus       211 ~~~~~~~-----R~g~pediA~~v~fLaSd~a~~iTG~~i~VDGG  250 (254)
T 4fn4_A          211 KLMSLSS-----RLAEPEDIANVIVFLASDEASFVNGDAVVVDGG  250 (254)
T ss_dssp             HHHTTCC-----CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hcCCCCC-----CCcCHHHHHHHHHHHhCchhcCCcCCEEEeCCC
Confidence            1111222     578999999999999965432  454 445443

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.94  E-value=8.2e-26  Score=186.21  Aligned_cols=211  Identities=16%  Similarity=0.136  Sum_probs=153.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+..        .      ..    ....+.+|++|.+++.++++  
T Consensus        27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~--------~------~~----~~~~~~~Dv~~~~~~~~~~~~~   88 (266)
T 3uxy_A           27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVA--------G------IA----ADLHLPGDLREAAYADGLPGAV   88 (266)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCT--------T------SC----CSEECCCCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH--------H------HH----hhhccCcCCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999761        1      10    11344799999988877765  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||....     ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.       
T Consensus        89 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------  160 (266)
T 3uxy_A           89 AAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPG-------  160 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCC-------
T ss_pred             HHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC-------
Confidence                 58999999998653     122333588999999999999987    4555 6899999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC---CccHHHHHHHHhcC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF---AGSVRSSLALILGN  221 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~---~~~~~~~~~~~~~~  221 (285)
                                     ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++......   ........... ..
T Consensus       161 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~  224 (266)
T 3uxy_A          161 ---------------PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAEL-GR  224 (266)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHH-HT
T ss_pred             ---------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHH-Hh
Confidence                           344679999999999999998775   899999999999987421100   00000011111 11


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ..+     ...+.+++|+|+++++++.....  .| .++++++
T Consensus       225 ~~p-----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 3uxy_A          225 TVP-----LGRIAEPEDIADVVLFLASDAARYLCGSLVEVNGG  262 (266)
T ss_dssp             TST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC-----CCCCcCHHHHHHHHHHHhCchhcCCcCCEEEECcC
Confidence            122     23789999999999999976432  34 4666654

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=2.7e-26  Score=188.23  Aligned_cols=219  Identities=14%  Similarity=0.165  Sum_probs=155.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+||||||+|+||++++++|+++|++|+++++...      ........+......++.++.+|++|.++++++++  
T Consensus        12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (256)
T 3ezl_A           12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNS------PRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKV   85 (256)
T ss_dssp             -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTC------SSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH------HHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHH
Confidence            5689999999999999999999999999999884331      11112222221223478899999999998888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+..+..+++|+.++.++.+++    ++.+ .++||++||..++.+.       
T Consensus        86 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  157 (256)
T 3ezl_A           86 KAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQ-------  157 (256)
T ss_dssp             HHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSC-------
T ss_pred             HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCC-------
Confidence                 579999999976531     12233588999999988876665    4455 6799999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++......+.....+   ...  .+
T Consensus       158 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~---~~~--~~  217 (256)
T 3ezl_A          158 ---------------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKI---VAT--IP  217 (256)
T ss_dssp             ---------------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHH---HHH--ST
T ss_pred             ---------------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHH---Hhc--CC
Confidence                           34567999999999999988877   48999999999998874322211111111   111  11


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                           ...+.+++|+|+++++++....  ..| .++++++
T Consensus       218 -----~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (256)
T 3ezl_A          218 -----VRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGG  252 (256)
T ss_dssp             -----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCC
Confidence                 2268899999999999996432  234 4667654

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.94  E-value=7e-26  Score=186.94  Aligned_cols=221  Identities=16%  Similarity=0.107  Sum_probs=154.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +..... .++..  .+.++.++.+|++|.+++++++
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   83 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS--------EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   83 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence            468999999999999999999999999999999976        222211 11100  1347889999999999888887


Q ss_pred             c-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHH----HHhcCCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKS----CLKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|+|||+||....      ...+.++..+++|+.++.++.++    +++.+ .++||++||..++.+.   
T Consensus        84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---  159 (267)
T 1iy8_A           84 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI---  159 (267)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC---
T ss_pred             HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCC---
Confidence            6       57999999997543      11223358899999988766555    44555 6899999998764332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCC----CCccHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK----FAGSVRSSLA  216 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~----~~~~~~~~~~  216 (285)
                                         ++...|+.||.+.+.+.+.++.+   .|+++++++||.++++.....    ..........
T Consensus       160 -------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  220 (267)
T 1iy8_A          160 -------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  220 (267)
T ss_dssp             -------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             -------------------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHH
Confidence                               23467999999999999988876   389999999999998742110    0011110000


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .... ..+     ...+.+++|+|+++++++..+.  ..| .+++.++
T Consensus       221 ~~~~-~~p-----~~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG  262 (267)
T 1iy8_A          221 EFIQ-VNP-----SKRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  262 (267)
T ss_dssp             HHHT-TCT-----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHhc-cCC-----CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence            1111 111     2368999999999999997542  234 4566554

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.94  E-value=1.3e-25  Score=185.29  Aligned_cols=219  Identities=19%  Similarity=0.111  Sum_probs=154.6

Q ss_pred             CCCeEEEecCCc-hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCC-CCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTG-FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP-GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|++|||||+| .||++++++|+++|++|++++|+.        +.... ..++. ....++.++.+|++|.+++++++
T Consensus        21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   92 (266)
T 3o38_A           21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE--------RRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI   92 (266)
T ss_dssp             TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH--------HHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHH
Confidence            468999999998 699999999999999999999986        22211 11111 12358999999999999888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.    +..++||++||..++...    
T Consensus        93 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~----  168 (266)
T 3o38_A           93 TQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQ----  168 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCC----
T ss_pred             HHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCC----
Confidence            5       479999999975531     22233588999999999999887653    225789999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+++.++.+   .|+++++++||.+.++........   ..... ...
T Consensus       169 ------------------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---~~~~~-~~~  226 (266)
T 3o38_A          169 ------------------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSS---ELLDR-LAS  226 (266)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------
T ss_pred             ------------------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcH---HHHHH-HHh
Confidence                              34567999999999999998877   589999999999998753321110   00011 111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       227 ~~~-----~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdgG  264 (266)
T 3o38_A          227 DEA-----FGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ  264 (266)
T ss_dssp             CCT-----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             cCC-----cCCCCCHHHHHHHHHHHcCccccCccCCEEEEcCC
Confidence            111     3378999999999999997543  235 4566554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=99.94  E-value=3.2e-26  Score=188.80  Aligned_cols=220  Identities=16%  Similarity=0.133  Sum_probs=157.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +..... .++.. .+.++.++.+|++|.++++++++
T Consensus        19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~   90 (266)
T 4egf_A           19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDV--------SELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR   90 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence            468999999999999999999999999999999976        222211 11111 13478999999999998888776


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.    +..++||++||..++.+.     
T Consensus        91 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-----  165 (266)
T 4egf_A           91 RAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPL-----  165 (266)
T ss_dssp             HHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCC-----
Confidence                   589999999986531     12223588999999999998887542    224699999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++........  ........ ..
T Consensus       166 -----------------~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~-~~  225 (266)
T 4egf_A          166 -----------------PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGD--EAKSAPMI-AR  225 (266)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCS--HHHHHHHH-TT
T ss_pred             -----------------CCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccC--hHHHHHHH-hc
Confidence                             334679999999999999998774   89999999999988742111100  01111111 11


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+.     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       226 ~p~-----~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdGG  262 (266)
T 4egf_A          226 IPL-----GRFAVPHEVSDAVVWLASDAASMINGVDIPVDGG  262 (266)
T ss_dssp             CTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCC
Confidence            222     368899999999999997543  234 4666654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.94  E-value=1.2e-25  Score=184.46  Aligned_cols=221  Identities=17%  Similarity=0.169  Sum_probs=153.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.+++.++++  
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   73 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYND--------ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA   73 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999976        222111 1111113468899999999999888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.    +..++||++||..++.+.       
T Consensus        74 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  146 (256)
T 1geg_A           74 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-------  146 (256)
T ss_dssp             HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------
T ss_pred             HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC-------
Confidence                 689999999975431     12223578999999998888776542    214699999998764332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc-------HHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS-------VRSSLAL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~-------~~~~~~~  217 (285)
                                     ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++.........       .......
T Consensus       147 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  211 (256)
T 1geg_A          147 ---------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAE  211 (256)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHH
Confidence                           23457999999999999988876   4899999999999887411100000       0000011


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ... ..+     ...+.+++|+|+++++++..+.  ..| .+.+.++
T Consensus       212 ~~~-~~p-----~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  252 (256)
T 1geg_A          212 FAK-RIT-----LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  252 (256)
T ss_dssp             HHT-TCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHh-cCC-----CCCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence            111 111     2368999999999999997542  235 4556554

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=99.94  E-value=5.4e-26  Score=188.31  Aligned_cols=221  Identities=20%  Similarity=0.134  Sum_probs=155.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +....+ .++   +.++.++.+|++|.++++++++ 
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   96 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDG--------DAADAAATKI---GCGAAACRVDVSDEQQIIAMVDA   96 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        222222 222   3478899999999998888776 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .++||++||..++.+.      
T Consensus        97 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~------  169 (277)
T 3gvc_A           97 CVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAV------  169 (277)
T ss_dssp             HHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC------
Confidence                  579999999986531     1223358899999999998888754    34 5799999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+   .|+++++++||.|++|..............   .....
T Consensus       170 ----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~---~~~~~  230 (277)
T 3gvc_A          170 ----------------GGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALG---AGGAR  230 (277)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHH
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHH---HHhhh
Confidence                            34467999999999999988877   489999999999998742110000000000   00000


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .........+.+++|+|+++++++....  ..| .++++++
T Consensus       231 ~~~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG  271 (277)
T 3gvc_A          231 SMIARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADGG  271 (277)
T ss_dssp             HHHHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhhhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECCc
Confidence            0000011268899999999999997543  234 4667664

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.94  E-value=7.5e-26  Score=186.93  Aligned_cols=220  Identities=16%  Similarity=0.150  Sum_probs=157.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++++..      .............+.++.++.+|++|.++++++++  
T Consensus        24 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (269)
T 3gk3_A           24 AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERN------DHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKV   97 (269)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCH------HHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCch------HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            4578999999999999999999999999999986541      11111112222234578999999999998888776  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+..+..+++|+.++.++++++..    .+ .++||++||..++...       
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  169 (269)
T 3gk3_A           98 LADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGA-------  169 (269)
T ss_dssp             HHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-------
T ss_pred             HHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCC-------
Confidence                 689999999976531     1223358899999999998888753    44 5799999998765333       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+++.++.++   |+++++++||.+.++........    ..   ..  ..
T Consensus       170 ---------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~~---~~--~~  225 (269)
T 3gk3_A          170 ---------------FGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQD----VL---EA--KI  225 (269)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------------C--CS
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchh----HH---HH--Hh
Confidence                           334679999999999998888774   89999999999998754321110    00   00  00


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ........+.+++|+|+++++++.....  .| .++++++
T Consensus       226 ~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG  265 (269)
T 3gk3_A          226 LPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADLAINGG  265 (269)
T ss_dssp             GGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEESTT
T ss_pred             hhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECCC
Confidence            0111234688999999999999976542  34 4677654

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.94  E-value=2.5e-25  Score=182.70  Aligned_cols=223  Identities=17%  Similarity=0.148  Sum_probs=155.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+..     .........++...+.++.++.+|++|.++++++++   
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   76 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQ-----EEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAA   76 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGG-----HHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            579999999999999999999999999999999761     100111111221123478899999999998888876   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCc-cEEEEeccceeeeccCCCCccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTV-KRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~-~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                          .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+ . ++||++||..++.+.       
T Consensus        77 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~-------  148 (258)
T 3a28_C           77 EKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGF-------  148 (258)
T ss_dssp             HHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCC-------
T ss_pred             HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCC-------
Confidence                689999999975431     1223358899999999998888765    35 5 799999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC-------ccHHHHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA-------GSVRSSLAL  217 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~~~~  217 (285)
                                     ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.......       .........
T Consensus       149 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  213 (258)
T 3a28_C          149 ---------------PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKE  213 (258)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHH
T ss_pred             ---------------CCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHH
Confidence                           234679999999999999888764   8999999999998763111000       000000011


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .. ...+     ...+.+++|+|+++++++....  ..| .+++.++
T Consensus       214 ~~-~~~p-----~~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG  254 (258)
T 3a28_C          214 YS-SSIA-----LGRPSVPEDVAGLVSFLASENSNYVTGQVMLVDGG  254 (258)
T ss_dssp             HH-TTCT-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HH-hcCC-----CCCccCHHHHHHHHHHHhCcccCCCCCCEEEECCC
Confidence            11 1111     2368999999999999997542  234 4556554

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.94  E-value=1.8e-25  Score=182.04  Aligned_cols=213  Identities=15%  Similarity=0.141  Sum_probs=155.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|++ .|+.|++.+|+..                 .....+.++.+|++|.++++++++ 
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~-----------------~~~~~~~~~~~Dv~~~~~v~~~~~~   65 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQS-----------------FSAENLKFIKADLTKQQDITNVLDI   65 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCC-----------------CCCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccc-----------------cccccceEEecCcCCHHHHHHHHHH
Confidence            578999999999999999999998 7899999988761                 012367899999999999998886 


Q ss_pred             ----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCC
Q 023244           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                          .+|+|||+||....     ...+.++..+++|+.++.++++++.+.- +-+++|++||..++...           
T Consensus        66 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  134 (244)
T 4e4y_A           66 IKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK-----------  134 (244)
T ss_dssp             TTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----------
T ss_pred             HHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----------
Confidence                57999999998543     1122335889999999999999987652 12489999998765332           


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCcc-------HHHHHHHHhcC
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGS-------VRSSLALILGN  221 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~-------~~~~~~~~~~~  221 (285)
                                 ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.+|.........       ....... ...
T Consensus       135 -----------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~  202 (244)
T 4e4y_A          135 -----------PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQ-EEK  202 (244)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHH-HHT
T ss_pred             -----------CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHH-Hhh
Confidence                       33467999999999999998875   4899999999999887421100000       0001111 111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      ..+     ...+.+++|+|+++++++.....  .| .++++++
T Consensus       203 ~~p-----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  240 (244)
T 4e4y_A          203 EFP-----LNRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDGG  240 (244)
T ss_dssp             TST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCC-----CCCCcCHHHHHHHHHHHhcCccccccCCeEeECCC
Confidence            112     23689999999999999975432  34 4566654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.94  E-value=1.1e-25  Score=186.62  Aligned_cols=223  Identities=13%  Similarity=0.074  Sum_probs=157.2

Q ss_pred             CC-CCCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            1 ME-EGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         1 M~-~~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |+ ..+|+++||||+  |+||++++++|+++|++|++++|+.     ...+....+...   ...+.++.+|++|.+++.
T Consensus         1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~-----~~~~~~~~l~~~---~~~~~~~~~D~~~~~~v~   72 (275)
T 2pd4_A            1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-----SLEKRVRPIAQE---LNSPYVYELDVSKEEHFK   72 (275)
T ss_dssp             -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-----TTHHHHHHHHHH---TTCCCEEECCTTCHHHHH
T ss_pred             CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHHh---cCCcEEEEcCCCCHHHHH
Confidence            54 346899999999  9999999999999999999999987     111122222221   113678899999999888


Q ss_pred             HHhc-------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeecc
Q 023244           78 AAIA-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~  140 (285)
                      ++++       .+|+|||+||....         ...+..+..+++|+.++.++++++.+.- ..++||++||..+..+.
T Consensus        73 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~  152 (275)
T 2pd4_A           73 SLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYM  152 (275)
T ss_dssp             HHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC
T ss_pred             HHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCC
Confidence            8876       47999999997542         1122335889999999999999998751 12699999997754322


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++..... .. .......
T Consensus       153 ----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~-~~~~~~~  208 (275)
T 2pd4_A          153 ----------------------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGI-AD-FRMILKW  208 (275)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGS-TT-HHHHHHH
T ss_pred             ----------------------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhc-cc-cHHHHHH
Confidence                                  234579999999999999988775   89999999999999853321 11 1111111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ... ..++     ..+.+++|+|+++++++....  ..|. +++.++
T Consensus       209 ~~~-~~p~-----~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgg  249 (275)
T 2pd4_A          209 NEI-NAPL-----RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  249 (275)
T ss_dssp             HHH-HSTT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHh-cCCc-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            111 1111     257899999999999996532  2454 556554

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=99.94  E-value=7.8e-26  Score=186.39  Aligned_cols=223  Identities=16%  Similarity=0.062  Sum_probs=157.4

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCC--CCCCCEEEEecCCCChhhHHHH
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP--GASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ..+|++|||||+|+||++++++|+++|++|++++|+.        +..... .++.  ....++.++.+|++|.+++.++
T Consensus         6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~   77 (265)
T 3lf2_A            6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDG--------ERLRAAESALRQRFPGARLFASVCDVLDALQVRAF   77 (265)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHH
Confidence            3568999999999999999999999999999999976        222211 1111  1123589999999999988887


Q ss_pred             hc-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|++||+||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.   
T Consensus        78 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~---  153 (265)
T 3lf2_A           78 AEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPE---  153 (265)
T ss_dssp             HHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCC---
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCC---
Confidence            75       57999999997543     11222358899999999999998754    33 5789999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC------ccHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA------GSVRSS  214 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~------~~~~~~  214 (285)
                                         +....|+.||.+.+.+.+.++.++   |+++++++||.+.+|.......      ......
T Consensus       154 -------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~  214 (265)
T 3lf2_A          154 -------------------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQW  214 (265)
T ss_dssp             -------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHH
T ss_pred             -------------------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHH
Confidence                               334679999999999999988775   8999999999998863211100      001111


Q ss_pred             HHHHh-cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          215 LALIL-GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       215 ~~~~~-~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ..... ....+.     ..+..++|+|+++++++....  ..|. ++++++
T Consensus       215 ~~~~~~~~~~p~-----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  260 (265)
T 3lf2_A          215 TAQLARNKQIPL-----GRLGKPIEAARAILFLASPLSAYTTGSHIDVSGG  260 (265)
T ss_dssp             HHHHHHHTTCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSS
T ss_pred             HHHHhhccCCCc-----CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECCC
Confidence            11111 111222     268999999999999997543  2454 566554

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=3.2e-26  Score=189.48  Aligned_cols=198  Identities=15%  Similarity=0.092  Sum_probs=148.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+|+||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.++++++++
T Consensus        29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~  100 (272)
T 1yb1_A           29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK--------HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAK  100 (272)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH--------HHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHH
Confidence            3468999999999999999999999999999999976        222211 1111113478999999999998888775


Q ss_pred             -------CCCEEEEecccCCCCC-----CChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||......     .+.....+++|+.++.++++++.    +.+ .++||++||..++...     
T Consensus       101 ~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~-----  174 (272)
T 1yb1_A          101 KVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV-----  174 (272)
T ss_dssp             HHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH-----
T ss_pred             HHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCC-----
Confidence                   5899999999765421     12234789999999887777664    345 6899999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc------CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH------GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~------~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                       ++...|+.||.+.+.+++.++.++      |++++++|||.+.++....    .         
T Consensus       175 -----------------~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~---------  224 (272)
T 1yb1_A          175 -----------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----P---------  224 (272)
T ss_dssp             -----------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----T---------
T ss_pred             -----------------CCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----c---------
Confidence                             123569999999999999888764      7999999999999875221    0         


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                        ..+     ...+++++|+|++++.++..+.
T Consensus       225 --~~~-----~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          225 --STS-----LGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             --HHH-----HCCCCCHHHHHHHHHHHHHTTC
T ss_pred             --ccc-----ccCCCCHHHHHHHHHHHHHcCC
Confidence              001     1258999999999999998654

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.94  E-value=1.7e-25  Score=182.94  Aligned_cols=206  Identities=19%  Similarity=0.157  Sum_probs=149.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+|+||||+|+||++++++|+++|++|++++|+..        .      .    ..+.++.+|++|.++++++++. 
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--------~------~----~~~~~~~~Dl~d~~~v~~~~~~~   81 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGE--------P------P----EGFLAVKCDITDTEQVEQAYKEI   81 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSC--------C------C----TTSEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH--------h------h----ccceEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999761        1      1    1367889999999988887763 


Q ss_pred             ------CCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           83 ------CTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 ------~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            +|+|||+||....      +.+++ +..+++|+.++.++++++.+    .+ .++||++||..++.+.      
T Consensus        82 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~-~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~------  153 (253)
T 2nm0_A           82 EETHGPVEVLIANAGVTKDQLLMRMSEEDF-TSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGS------  153 (253)
T ss_dssp             HHHTCSCSEEEEECSCCTTTC---CCTTTT-HHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCH------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCC------
Confidence                  6999999997543      23344 58999999999998887653    35 6899999998764322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+.   |+++++++||.+.++..........    ..... ..
T Consensus       154 ----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~----~~~~~-~~  212 (253)
T 2nm0_A          154 ----------------AGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQR----ANIVS-QV  212 (253)
T ss_dssp             ----------------HHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CH----HHHHT-TC
T ss_pred             ----------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHH----HHHHh-cC
Confidence                            123569999999999999988774   7999999999998875321110111    11111 11


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      +     ...+++++|+|+++++++..+.  ..|. +.+.++
T Consensus       213 p-----~~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdGG  248 (253)
T 2nm0_A          213 P-----LGRYARPEEIAATVRFLASDDASYITGAVIPVDGG  248 (253)
T ss_dssp             T-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCccccCCcCcEEEECCc
Confidence            1     1268999999999999997643  2354 556554

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.94  E-value=3.7e-26  Score=191.69  Aligned_cols=216  Identities=19%  Similarity=0.141  Sum_probs=150.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  101 (301)
T 3tjr_A           30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQ--------PALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE  101 (301)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence            357899999999999999999999999999999986        22222 11221123478999999999999888876 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||....     ...+..+..+++|+.++.++++++.+    .+..++||++||..++.+.      
T Consensus       102 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~------  175 (301)
T 3tjr_A          102 AFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPN------  175 (301)
T ss_dssp             HHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCC------
T ss_pred             HHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCC------
Confidence                  68999999997643     12223358899999999999988643    3324699999998865332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc-
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR-  222 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~-  222 (285)
                                      ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++...........  .......+ 
T Consensus       176 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~~  237 (301)
T 3tjr_A          176 ----------------AGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGA--DYGMSATPE  237 (301)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-------------
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccch--hhccccChh
Confidence                            345679999999999998888774   89999999999988632110000000  00000000 


Q ss_pred             cccc-cccCcceeeHHHHHHHHHHhhcCCC
Q 023244          223 EEYG-FLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       223 ~~~~-~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ..+. ......+++++|+|+.++.+++.+.
T Consensus       238 ~~~~~~~~~~~~~~pedvA~~i~~~l~~~~  267 (301)
T 3tjr_A          238 GAFGPLPTQDESVSADDVARLTADAILANR  267 (301)
T ss_dssp             -----------CCCHHHHHHHHHHHHHHTC
T ss_pred             hhccccccccCCCCHHHHHHHHHHHHhcCC
Confidence            0000 0223468999999999999998653

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=6.1e-26  Score=189.93  Aligned_cols=234  Identities=18%  Similarity=0.111  Sum_probs=160.7

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCC---CEEEEecCCCChhhHHH
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASE---RLRIFHADLSHPDGFDA   78 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~Dl~d~~~~~~   78 (285)
                      ..+|++|||||+|+||++++++|+++|++|++++|+.        +..... .++...+.   ++.++.+|++|.+++++
T Consensus        24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~   95 (297)
T 1xhl_A           24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNE--------DRLEETKQQILKAGVPAEKINAVVADVTEASGQDD   95 (297)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHH
Confidence            3468999999999999999999999999999999976        222211 11111122   68899999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccC
Q 023244           79 AIA-------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~  141 (285)
                      +++       .+|+|||+||.....       ..+.++..+++|+.++.++++++.+.   . .++||++||..++... 
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~IV~isS~~~~~~~-  173 (297)
T 1xhl_A           96 IINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT-KGEIVNVSSIVAGPQA-  173 (297)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGSSSC-
T ss_pred             HHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCEEEEEcCchhccCC-
Confidence            876       589999999975431       11223588999999999998887653   2 1799999998754321 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC-CccH----HH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-AGSV----RS  213 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~-~~~~----~~  213 (285)
                                          .++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++...... ....    ..
T Consensus       174 --------------------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~  233 (297)
T 1xhl_A          174 --------------------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYS  233 (297)
T ss_dssp             --------------------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHH
T ss_pred             --------------------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHH
Confidence                                023457999999999999988865   4899999999999987422110 0000    00


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC---CCCc-eEEEecc-ccCHHHHHHHH
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP---DAKG-RYICSSH-TLTIQEMAEFL  272 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~-~~~~~~~-~~s~~e~~~~i  272 (285)
                      .... .....+     ...+.+++|+|+++++++..+   ...| .+++.++ .....+.+..+
T Consensus       234 ~~~~-~~~~~p-----~~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~  291 (297)
T 1xhl_A          234 FIGS-RKECIP-----VGHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDL  291 (297)
T ss_dssp             HHHH-CTTTCT-----TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCH
T ss_pred             HHHH-HHhcCC-----CCCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccch
Confidence            0111 111112     236899999999999999754   2334 4566654 44444443333

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.94  E-value=1.2e-25  Score=187.41  Aligned_cols=242  Identities=15%  Similarity=0.114  Sum_probs=161.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcccc----Cccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR----NSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.......    ..+.... .......+.++.++.+|++|.+++.+
T Consensus         9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~   88 (287)
T 3pxx_A            9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR   88 (287)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence            468999999999999999999999999999999873100000    0011111 11111124578999999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCCC---CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccc
Q 023244           79 AIA-------GCTGVLHVATPVDFE---DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      +++       .+|+|||+||.....   ..+.++..+++|+.++.++++++.+.- ...++|++||..++.....  .+.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~--~~~  166 (287)
T 3pxx_A           89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQ--PPG  166 (287)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHC--CC-
T ss_pred             HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccc--ccc
Confidence            776       689999999986542   223346899999999999999998752 2469999999886544311  111


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC----------CccHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF----------AGSVRSS  214 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~----------~~~~~~~  214 (285)
                      .+..+         .++...|+.||.+.+.+.+.++.++   |+++++++||.|.++......          .......
T Consensus       167 ~~~~~---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~  237 (287)
T 3pxx_A          167 AGGPQ---------GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA  237 (287)
T ss_dssp             ----C---------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHH
T ss_pred             ccccC---------CCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHH
Confidence            22211         1234579999999999999998875   899999999999998643210          0000000


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ........     .....+.+++|+|+++++++....  ..| .++++++
T Consensus       238 ~~~~~~~~-----~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG  282 (287)
T 3pxx_A          238 LLAFPAMQ-----AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAG  282 (287)
T ss_dssp             HHHGGGGC-----SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             Hhhhhhhc-----ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECch
Confidence            00000000     111478999999999999996543  234 4666654

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.94  E-value=2.2e-25  Score=186.54  Aligned_cols=220  Identities=13%  Similarity=-0.002  Sum_probs=158.1

Q ss_pred             CCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+|  +||++++++|+++|++|++++|+.        +....+.+.......+.++.+|++|.++++++++
T Consensus        29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSE--------TFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence            468999999997  999999999999999999999986        2222222111111246789999999999888876


Q ss_pred             -------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|+|||+||....         ...+.+...+++|+.++.++++++...- ..++||++||..++...    
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~----  176 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVV----  176 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC----
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCC----
Confidence                   47999999997641         1222335889999999999999987652 24699999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.++   |+++++++||.|.++..... .. ......... .
T Consensus       177 ------------------~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~-~~~~~~~~~-~  235 (296)
T 3k31_A          177 ------------------PHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-SD-FHYILTWNK-Y  235 (296)
T ss_dssp             ------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-HH-HHHHHHHHH-H
T ss_pred             ------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-cc-hHHHHHHHH-h
Confidence                              234679999999999999988775   89999999999999854321 11 111111111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+.     ..+..++|+|+++++++....  ..| .++++++
T Consensus       236 ~~p~-----~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  273 (296)
T 3k31_A          236 NSPL-----RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDCG  273 (296)
T ss_dssp             HSTT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCCCHHHHHHHHHHHcCCccCCccCCEEEECCC
Confidence            1122     268899999999999997532  235 4666654

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.94  E-value=1.2e-25  Score=180.66  Aligned_cols=205  Identities=14%  Similarity=0.024  Sum_probs=153.5

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..++|++|||||+|+||++++++|+++|++|++++|+.                      .     +|++|.++++++++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~----------------------~-----~D~~~~~~v~~~~~   55 (223)
T 3uce_A            3 GSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQT----------------------G-----LDISDEKSVYHYFE   55 (223)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGG----------------------T-----CCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCc----------------------c-----cCCCCHHHHHHHHH
Confidence            44578999999999999999999999999999999987                      1     89999999988886


Q ss_pred             ---CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCC
Q 023244           82 ---GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        82 ---~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                         .+|++||+||....      ...+..+..+++|+.++.++++++.+.- +-+++|++||..++...           
T Consensus        56 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~-----------  124 (223)
T 3uce_A           56 TIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVV-----------  124 (223)
T ss_dssp             HHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCC-----------
T ss_pred             HhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCC-----------
Confidence               58999999997622      1122235789999999999999997752 13589999998765332           


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC-CcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG-LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~-i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                                 ++...|+.||.+.+.+.+.++.+++ +++++++||.+.+|.................. ...+     .
T Consensus       125 -----------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~~-----~  187 (223)
T 3uce_A          125 -----------ANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQ-SHLP-----V  187 (223)
T ss_dssp             -----------TTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHH-HHST-----T
T ss_pred             -----------CCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHh-hcCC-----C
Confidence                       3446799999999999999998875 99999999999988543321111111111111 1112     2


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 023244          231 TSMVHVDDVARAHIFLLEYPDAKGR-YICSSH  261 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  261 (285)
                      ..+.+++|+|+++++++......|. ++++++
T Consensus       188 ~~~~~~~dvA~~~~~l~~~~~~tG~~i~vdgG  219 (223)
T 3uce_A          188 GKVGEASDIAMAYLFAIQNSYMTGTVIDVDGG  219 (223)
T ss_dssp             CSCBCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             CCccCHHHHHHHHHHHccCCCCCCcEEEecCC
Confidence            3689999999999999986655564 566654

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.94  E-value=1.1e-25  Score=184.98  Aligned_cols=207  Identities=14%  Similarity=0.118  Sum_probs=147.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.++++++++ 
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~   74 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQ--------ARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA   74 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        22222 11221123478899999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.      
T Consensus        75 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~------  147 (264)
T 3tfo_A           75 AVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVV------  147 (264)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccC------
Confidence                  589999999986531     223335889999999988877764    344 5799999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                      +....|+.||.+.+.+.+.++.+. |+++++++||.|.++...........   .    ...  
T Consensus       148 ----------------~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~~---~----~~~--  202 (264)
T 3tfo_A          148 ----------------PTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEETM---A----AMD--  202 (264)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------
T ss_pred             ----------------CCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhHH---H----HHH--
Confidence                            234679999999999999998876 89999999999988753221100000   0    000  


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                        .....+..++|+|+++++++..+..
T Consensus       203 --~~~~~~~~pedvA~~v~~l~s~~~~  227 (264)
T 3tfo_A          203 --TYRAIALQPADIARAVRQVIEAPQS  227 (264)
T ss_dssp             -------CCCHHHHHHHHHHHHHSCTT
T ss_pred             --hhhccCCCHHHHHHHHHHHhcCCcc
Confidence              0011257899999999999988765

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.94  E-value=5.5e-26  Score=188.56  Aligned_cols=234  Identities=15%  Similarity=0.116  Sum_probs=158.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc-----cCccchhh-hhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH-----RNSKDLSF-LKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+......     .+.+.... .......+.++.++.+|++|.++++
T Consensus        10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   89 (277)
T 3tsc_A           10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR   89 (277)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            46899999999999999999999999999999985310000     01111111 1111112457899999999999888


Q ss_pred             HHhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccC
Q 023244           78 AAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++++       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+..++||++||..++... 
T Consensus        90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  168 (277)
T 3tsc_A           90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQ-  168 (277)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCC-
Confidence            8875       489999999986541     1233358899999999998888543    3324699999998765332 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           +....|+.||.+.+.+.+.++.++   |+++++++||.|.++.....   .........
T Consensus       169 ---------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~  224 (277)
T 3tsc_A          169 ---------------------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD---MVTAVGQAM  224 (277)
T ss_dssp             ---------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH---HHHHHHHHH
T ss_pred             ---------------------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch---hhhhhhhcc
Confidence                                 334679999999999999998874   79999999999998753210   111111111


Q ss_pred             hcCcc---ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEeccc
Q 023244          219 LGNRE---EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSHT  262 (285)
Q Consensus       219 ~~~~~---~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~~  262 (285)
                      ...+.   .+.......+.+++|+|+++++++....  ..| .++++++.
T Consensus       225 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~  274 (277)
T 3tsc_A          225 ETNPQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS  274 (277)
T ss_dssp             HTCGGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred             cccHHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence            11111   1111111258999999999999997543  234 45666653

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.94  E-value=8e-26  Score=186.01  Aligned_cols=214  Identities=21%  Similarity=0.184  Sum_probs=156.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+++||||||+||++++++|+++|++|++++|+.        +..... .++.   .++.++.+|++|.++++++++ 
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~   73 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREE--------RLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAE   73 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        333222 2222   478899999999998888776 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.- ..++||++||..++ +.         
T Consensus        74 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~---------  143 (263)
T 2a4k_A           74 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA---------  143 (263)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH---------
T ss_pred             HHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CC---------
Confidence                  369999999975431     112235789999999999999987652 13699999998765 21         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   ++...|+.||.+.+.+.+.++.+.   |+++++++||.+.++..... .   .......... .+. 
T Consensus       144 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~---~~~~~~~~~~-~p~-  204 (263)
T 2a4k_A          144 -------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL-P---PWAWEQEVGA-SPL-  204 (263)
T ss_dssp             -------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS-C---HHHHHHHHHT-STT-
T ss_pred             -------------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc-C---HHHHHHHHhc-CCC-
Confidence                         123569999999999988888764   89999999999999853321 1   1111111111 112 


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          ..+.+++|+|+++++++....  ..| .+++.++
T Consensus       205 ----~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdgG  238 (263)
T 2a4k_A          205 ----GRAGRPEEVAQAALFLLSEESAYITGQALYVDGG  238 (263)
T ss_dssp             ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCcCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence                258999999999999997543  235 4556654

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.94  E-value=1e-25  Score=185.39  Aligned_cols=200  Identities=20%  Similarity=0.164  Sum_probs=146.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.+++.++++ 
T Consensus        28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   99 (262)
T 3rkr_A           28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDV--------EKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG   99 (262)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        222221 1211223578999999999998888775 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||....      ...+..+..+++|+.++.++++++..    .+ .++||++||..++...     
T Consensus       100 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  173 (262)
T 3rkr_A          100 VLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPV-----  173 (262)
T ss_dssp             HHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCC-----
T ss_pred             HHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCC-----
Confidence                  37999999997321      12223358899999999999888643    34 6899999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+++.++.+   .|+++++++||.+.++......            .. 
T Consensus       174 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------------~~-  223 (262)
T 3rkr_A          174 -----------------ADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS------------AK-  223 (262)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc------------cc-
Confidence                             33467999999999999988877   4899999999999886422110            00 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                           .....+++++|+|+++++++.....
T Consensus       224 -----~~~~~~~~p~dvA~~v~~l~s~~~~  248 (262)
T 3rkr_A          224 -----KSALGAIEPDDIADVVALLATQADQ  248 (262)
T ss_dssp             ----------CCCHHHHHHHHHHHHTCCTT
T ss_pred             -----cccccCCCHHHHHHHHHHHhcCccc
Confidence                 0112578999999999999987544

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.94  E-value=7.9e-26  Score=188.16  Aligned_cols=225  Identities=14%  Similarity=0.051  Sum_probs=157.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+...   ........+..   .+.++.++.+|++|.+++.++++  
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTE---SAEEVVAAIKK---NGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHHHHHHHH---TTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHHHHH---hCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            46899999999999999999999999999999997610   00001111222   23478899999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.  + .++||++||..++....        
T Consensus       102 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~~~~--------  172 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQAKAV--------  172 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTCSSC--------
T ss_pred             HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhccCCC--------
Confidence                 579999999976431     12333588999999999999999876  4 57999999987543220        


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC----Ccc---HHHHHHHHh
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF----AGS---VRSSLALIL  219 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~----~~~---~~~~~~~~~  219 (285)
                                   .+...|+.||.+.+.+.+.++.+.   |+++++++||.+.++......    +..   .........
T Consensus       173 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T 1g0o_A          173 -------------PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYA  239 (283)
T ss_dssp             -------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHH
T ss_pred             -------------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHH
Confidence                         124679999999999999888763   899999999999887321100    000   011111111


Q ss_pred             c-CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          220 G-NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       220 ~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      . ...+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       240 ~~~~~p-----~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG  280 (283)
T 1g0o_A          240 AVQWSP-----LRRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  280 (283)
T ss_dssp             HHHSCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             hhcCCC-----CCCCcCHHHHHHHHHHHhCccccCcCCCEEEeCCC
Confidence            1 0111     2268899999999999997543  234 4556554

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.94  E-value=2.1e-25  Score=185.35  Aligned_cols=224  Identities=17%  Similarity=0.101  Sum_probs=156.3

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCC---CEEEEecCCCChhhHHH
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASE---RLRIFHADLSHPDGFDA   78 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~Dl~d~~~~~~   78 (285)
                      .++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.   ++.++.+|++|.+++++
T Consensus         4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   75 (280)
T 1xkq_A            4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSS--------ERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQ   75 (280)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHH
Confidence            3468999999999999999999999999999999976        222211 11111122   68899999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCCC---------CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeecc
Q 023244           79 AIA-------GCTGVLHVATPVDFE---------DKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~  140 (285)
                      +++       .+|+|||+||.....         ..+.++..+++|+.++.++++++.+.-  ..++||++||..++...
T Consensus        76 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  155 (280)
T 1xkq_A           76 IINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA  155 (280)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCC
Confidence            776       589999999975431         112235889999999999998876531  01799999998754321


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC-CccH----H
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-AGSV----R  212 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~-~~~~----~  212 (285)
                                           .++...|+.||.+.+.+.+.++.+   .|+++++++||.+++|...... ....    .
T Consensus       156 ---------------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~  214 (280)
T 1xkq_A          156 ---------------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFY  214 (280)
T ss_dssp             ---------------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHH
T ss_pred             ---------------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchH
Confidence                                 023457999999999999988865   4899999999999998422110 0000    0


Q ss_pred             HHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC---CCCc-eEEEecc
Q 023244          213 SSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP---DAKG-RYICSSH  261 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~-~~~~~~~  261 (285)
                      ..... .....+     ...+.+++|+|+++++++..+   ...| .+++.++
T Consensus       215 ~~~~~-~~~~~p-----~~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG  261 (280)
T 1xkq_A          215 NFMAS-HKECIP-----IGAAGKPEHIANIILFLADRNLSFYILGQSIVADGG  261 (280)
T ss_dssp             HHHHH-CTTTCT-----TSSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHHH-HHcCCC-----CCCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence            01111 111112     236899999999999999654   2334 4566654

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.94  E-value=2.3e-26  Score=192.26  Aligned_cols=220  Identities=14%  Similarity=0.074  Sum_probs=157.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.     . .+....+. .....+.++.++.+|++|.++++++++ 
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~  121 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPA-----E-EEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHK  121 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGG-----G-HHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc-----c-hhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999998864     0 01111111 111123578999999999998888775 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++.+.- +-++||++||..++...        
T Consensus       122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~--------  193 (294)
T 3r3s_A          122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPS--------  193 (294)
T ss_dssp             HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCC--------
T ss_pred             HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCC--------
Confidence                  58999999997542      1223335889999999999999998763 13599999998865433        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCC-CCC-ccHHHHHHHHhcCcc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP-KFA-GSVRSSLALILGNRE  223 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~-~~~-~~~~~~~~~~~~~~~  223 (285)
                                    ++...|+.||.+.+.+.+.++.++   |+++++++||.|+++.... ... ....     ..... 
T Consensus       194 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~-----~~~~~-  253 (294)
T 3r3s_A          194 --------------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIP-----QFGQQ-  253 (294)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGST-----TTTTT-
T ss_pred             --------------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHH-----HHHhc-
Confidence                          334679999999999999998875   8999999999999874111 000 0000     00111 


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          .....+..++|+|+++++++....  ..| +++++++
T Consensus       254 ----~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  290 (294)
T 3r3s_A          254 ----TPMKRAGQPAELAPVYVYLASQESSYVTAEVHGVCGG  290 (294)
T ss_dssp             ----STTSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence                113368899999999999997543  234 5666654

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=1.5e-25  Score=184.77  Aligned_cols=219  Identities=16%  Similarity=0.137  Sum_probs=154.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcC-CCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNL-PGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +..... .++ ...+.++.++.+|++|.++++++++
T Consensus        20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   91 (267)
T 1vl8_A           20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL--------EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence            468999999999999999999999999999999976        222111 111 0012368889999999998888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccce-eeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNA-AVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~-~~~~~~~~~  144 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||.. .....    
T Consensus        92 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~----  166 (267)
T 1vl8_A           92 AVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTM----  166 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCS----
T ss_pred             HHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCC----
Confidence                   589999999976431     112235788999999999988764    344 68999999986 32111    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+++.++.+   .|+++++++||.+.++........  ..........
T Consensus       167 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~  226 (267)
T 1vl8_A          167 ------------------PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEKLDYMLKR  226 (267)
T ss_dssp             ------------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHHHHHHHHT
T ss_pred             ------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--hHHHHHHHhh
Confidence                              23467999999999999998877   489999999999988742210000  1111111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       .+.     ..+++++|+|+++++++....  ..|. +.+.++
T Consensus       227 -~p~-----~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG  263 (267)
T 1vl8_A          227 -IPL-----GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  263 (267)
T ss_dssp             -CTT-----SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCC-----CCCcCHHHHHHHHHHHcCccccCCcCCeEEECCC
Confidence             111     268999999999999997542  2354 556554

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.94  E-value=7.6e-26  Score=187.37  Aligned_cols=223  Identities=18%  Similarity=0.123  Sum_probs=156.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|+||||+|+||++++++|++ .|++|++++|+.        +.... ..++...+.++.++.+|++|.+++.++++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~   74 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--------TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD   74 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSH--------HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCCh--------HHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence            468999999999999999999999 899999999976        22111 11111113468899999999999888876


Q ss_pred             -------CCCEEEEecccCCCCC-----CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCC------
Q 023244           82 -------GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDK------  142 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~------  142 (285)
                             .+|+|||+||......     .+..+..+++|+.++.++++++.+.- +.++||++||..++.....      
T Consensus        75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~  154 (276)
T 1wma_A           75 FLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQ  154 (276)
T ss_dssp             HHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHH
T ss_pred             HHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHH
Confidence                   6899999999764321     12235789999999999999998762 1359999999877643110      


Q ss_pred             ---CCcccccCCCCchhh----------hhhcCCCCchhHhhHHHHHHHHHHHHHH-------cCCcEEEeccCceecCC
Q 023244          143 ---DVDMMDETFWSDVDY----------IRKLDSWGKSYAISKTLTERAALEFAEE-------HGLDLVTLIPSMVVGPF  202 (285)
Q Consensus       143 ---~~~~~~e~~~~~~~~----------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~i~~~i~Rp~~v~g~~  202 (285)
                         ....++|+++.....          ......|...|+.||.+.|.+++.++.+       .|+++++++||.|.++.
T Consensus       155 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~  234 (276)
T 1wma_A          155 QKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDM  234 (276)
T ss_dssp             HHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTT
T ss_pred             hhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCc
Confidence               001222222110000          0000113378999999999999888766       48999999999998874


Q ss_pred             CCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC----CCceEEEe
Q 023244          203 ICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD----AKGRYICS  259 (285)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~----~~~~~~~~  259 (285)
                      ...                         ..+.+++|+|+.+++++..+.    ..|.|...
T Consensus       235 ~~~-------------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~~  270 (276)
T 1wma_A          235 AGP-------------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVSE  270 (276)
T ss_dssp             TCT-------------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEET
T ss_pred             CCc-------------------------cccCChhHhhhhHhhhhcCcccccccCceEecc
Confidence            221                         147899999999999997552    24555433

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.94  E-value=2.9e-25  Score=181.09  Aligned_cols=207  Identities=18%  Similarity=0.131  Sum_probs=148.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+|+||||+|+||++++++|+++|++|++++|+.        +...          .+..+.+|++|.++++++++  
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~----------~~~~~~~D~~~~~~~~~~~~~~   75 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS--------GAPK----------GLFGVEVDVTDSDAVDRAFTAV   75 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSS--------CCCT----------TSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh--------HHHH----------HhcCeeccCCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999976        1111          11237899999998888775  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.       
T Consensus        76 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  147 (247)
T 1uzm_A           76 EEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-------  147 (247)
T ss_dssp             HHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----------
T ss_pred             HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC-------
Confidence                 47999999997543     11223358899999999999888754    44 6899999998765432       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.+   .|+++++++||.+.++.... ..   ........ ...+
T Consensus       148 ---------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~---~~~~~~~~-~~~p  207 (247)
T 1uzm_A          148 ---------------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LD---ERIQQGAL-QFIP  207 (247)
T ss_dssp             ----------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SC---HHHHHHHG-GGCT
T ss_pred             ---------------CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cC---HHHHHHHH-hcCC
Confidence                           23457999999999999888877   48999999999998763211 00   11111111 1111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                           ...+++++|+|+++++++....  ..| .++++++
T Consensus       208 -----~~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdgG  242 (247)
T 1uzm_A          208 -----AKRVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  242 (247)
T ss_dssp             -----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCCCcCHHHHHHHHHHHcCccccCCcCCEEEECCC
Confidence                 2368999999999999997532  234 4566654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=99.94  E-value=7.8e-25  Score=176.83  Aligned_cols=209  Identities=17%  Similarity=0.123  Sum_probs=154.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+||||||++.||+++++.|+++|++|++++|+.        +....+.+.   ..++.++.+|++|+++++++++   
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~--------~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~   70 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE--------KRSADFAKE---RPNLFYFHGDVADPLTLKKFVEYAM   70 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHTT---CTTEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHh---cCCEEEEEecCCCHHHHHHHHHHHH
Confidence            48999999999999999999999999999999986        333333322   3478899999999998888775   


Q ss_pred             ----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                          .+|++||+||....     ...+.++..+++|+.++..+.+++.+.   + -.++|++||..+..+.         
T Consensus        71 ~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~~~~~~~---------  140 (247)
T 3ged_A           71 EKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIASTRAFQSE---------  140 (247)
T ss_dssp             HHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCGGGTSCC---------
T ss_pred             HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeecccccCC---------
Confidence                47999999987554     122334688999999998888776432   2 3799999998765333         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                   +....|+.||.....+.+.++.++  +++++.|.||.+-.+.....    ......     ..++. 
T Consensus       141 -------------~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~----~~~~~~-----~~Pl~-  197 (247)
T 3ged_A          141 -------------PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF----TQEDCA-----AIPAG-  197 (247)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C----CHHHHH-----TSTTS-
T ss_pred             -------------CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH----HHHHHh-----cCCCC-
Confidence                         234679999999999888888775  79999999999987653221    111111     12222 


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCCCceE-EEecc
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDAKGRY-ICSSH  261 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~~~~  261 (285)
                          .+..++|+|.++++++...-..|.. .+.|+
T Consensus       198 ----R~g~pediA~~v~fL~s~~~iTG~~i~VDGG  228 (247)
T 3ged_A          198 ----KVGTPKDISNMVLFLCQQDFITGETIIVDGG  228 (247)
T ss_dssp             ----SCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             ----CCcCHHHHHHHHHHHHhCCCCCCCeEEECcC
Confidence                6889999999999999754445654 45443

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.94  E-value=1.8e-25  Score=184.43  Aligned_cols=228  Identities=16%  Similarity=0.146  Sum_probs=156.5

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+..    ...+....+... .....+.++.+|++|.+.++++++ 
T Consensus         8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~-~~~~~~~~~~~D~~~~~~~~~~~~~   82 (267)
T 3t4x_A            8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREE----NVNETIKEIRAQ-YPDAILQPVVADLGTEQGCQDVIEK   82 (267)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHH----HHHHHHHHHHHH-CTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhh-CCCceEEEEecCCCCHHHHHHHHHh
Confidence            35689999999999999999999999999999999861    000111111111 112467889999999999988886 


Q ss_pred             --CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 --GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 --~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                        .+|++||+||.....     ..+.++..+++|+.++.++.+++    ++.+ .+++|++||..++.+.          
T Consensus        83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------  151 (267)
T 3t4x_A           83 YPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPS----------  151 (267)
T ss_dssp             CCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCC----------
T ss_pred             cCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCC----------
Confidence              589999999986541     12223577999999977776665    3445 6899999998765332          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC-------CCccHHHHHH-HHh
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-------FAGSVRSSLA-LIL  219 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~~~~-~~~  219 (285)
                                  ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.....       .......... ...
T Consensus       152 ------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (267)
T 3t4x_A          152 ------------QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMK  219 (267)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHH
T ss_pred             ------------CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhh
Confidence                        345679999999999999999875   69999999999988631100       0000111111 111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .....   .....+.+++|+|+++++++....  ..| .++++++
T Consensus       220 ~~~~~---~~~~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG  261 (267)
T 3t4x_A          220 ENRPT---SIIQRLIRPEEIAHLVTFLSSPLSSAINGSALRIDGG  261 (267)
T ss_dssp             HHCTT---CSSCSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccCCc---ccccCccCHHHHHHHHHHHcCccccCccCCeEEECCC
Confidence            10000   112479999999999999997543  234 4667654

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.94  E-value=5.4e-26  Score=188.00  Aligned_cols=228  Identities=15%  Similarity=0.071  Sum_probs=158.4

Q ss_pred             CCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+||||||+  |+||++++++|+++|++|++++|+.     ...+....+...   .+++.++.+|++|.++++++++
T Consensus        13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A           13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGD-----RFKDRITEFAAE---FGSELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHH---TTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecch-----hhHHHHHHHHHH---cCCcEEEECCCCCHHHHHHHHH
Confidence            56899999999  9999999999999999999999975     222222222111   2357889999999999888876


Q ss_pred             -------CCCEEEEecccCCC----------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|+|||+||....          ...+.....+++|+.++.++++++.+.- +.++||++||..++...   
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---  161 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAI---  161 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCC---
Confidence                   46999999997542          1122335889999999999999987651 13589999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++..... . ...........
T Consensus       162 -------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~~~  220 (271)
T 3ek2_A          162 -------------------PNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-K-SFGKILDFVES  220 (271)
T ss_dssp             -------------------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-H-HHHHHHHHHHH
T ss_pred             -------------------CCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-c-chHHHHHHHHh
Confidence                               334679999999999999988764   89999999999998753321 1 01111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc-ccCHHHHH
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH-TLTIQEMA  269 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~-~~s~~e~~  269 (285)
                       ..+     ...+.+++|+|+++++++....  ..| .++++++ ..++.++.
T Consensus       221 -~~~-----~~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~  267 (271)
T 3ek2_A          221 -NSP-----LKRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMA  267 (271)
T ss_dssp             -HST-----TSSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC-
T ss_pred             -cCC-----cCCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhh
Confidence             112     2268899999999999997532  345 4666654 45544443

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.94  E-value=2e-25  Score=184.13  Aligned_cols=208  Identities=17%  Similarity=0.166  Sum_probs=154.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC---CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+||||||+|+||++++++|+++|   ++|++++|+..        ....+.++.....++.++.+|++|.+++++++
T Consensus        20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~--------~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~   91 (267)
T 1sny_A           20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNRE--------QAKELEDLAKNHSNIHILEIDLRNFDAYDKLV   91 (267)
T ss_dssp             CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTT--------SCHHHHHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChh--------hhHHHHHhhccCCceEEEEecCCChHHHHHHH
Confidence            46899999999999999999999999   99999999872        11122221111347899999999999988887


Q ss_pred             c---------CCCEEEEecccCC-C-----CCCChHHHHHHHHHHHHHHHHHHHHhc----------CC----ccEEEEe
Q 023244           81 A---------GCTGVLHVATPVD-F-----EDKEPEEVITQRAINGTLGILKSCLKS----------GT----VKRVVYT  131 (285)
Q Consensus        81 ~---------~~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~----~~~~v~~  131 (285)
                      +         .+|+|||+||... .     ...+..+..+++|+.++.++++++.+.          +.    .++||++
T Consensus        92 ~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~i  171 (267)
T 1sny_A           92 ADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINM  171 (267)
T ss_dssp             HHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEE
T ss_pred             HHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEE
Confidence            6         6999999999765 2     112333578999999999999888543          10    3689999


Q ss_pred             ccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCC
Q 023244          132 SSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFA  208 (285)
Q Consensus       132 SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~  208 (285)
                      ||..++.....                   .++...|+.||.+.+.+++.++.+   .|++++++|||.|.++....   
T Consensus       172 sS~~~~~~~~~-------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---  229 (267)
T 1sny_A          172 SSILGSIQGNT-------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS---  229 (267)
T ss_dssp             CCGGGCSTTCC-------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---
T ss_pred             ecccccccCCC-------------------CCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---
Confidence            99876543210                   123457999999999999998877   48999999999998864211   


Q ss_pred             ccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceEE-Eecccc
Q 023244          209 GSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRYI-CSSHTL  263 (285)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~-~~~~~~  263 (285)
                                            ..++.++|+|+.++.++....  ..|.|. ..++.+
T Consensus       230 ----------------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          230 ----------------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             ----------------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             ----------------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence                                  035788999999999997543  245554 444444

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.94  E-value=2.4e-25  Score=183.93  Aligned_cols=224  Identities=15%  Similarity=0.100  Sum_probs=157.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++++..       +.... ..++...+.++.++.+|++|.+++.++++ 
T Consensus        17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANST-------KDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCH-------HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            4689999999999999999999999999999887651       11111 11111123578999999999998888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.- +-+++|++||.......         
T Consensus        90 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---------  160 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS---------  160 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC---------
Confidence                  579999999986541     223335889999999999999987753 13599999997621111         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----C----CccHHHHHHHH
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----F----AGSVRSSLALI  218 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----~----~~~~~~~~~~~  218 (285)
                                  .++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.....    .    ...........
T Consensus       161 ------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (270)
T 3is3_A          161 ------------VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMA  228 (270)
T ss_dssp             ------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHH
T ss_pred             ------------CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHH
Confidence                        1345679999999999999998874   89999999999998753210    0    00011111111


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       ....+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       229 -~~~~p-----~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  268 (270)
T 3is3_A          229 -AHASP-----LHRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG  268 (270)
T ss_dssp             -HHHST-----TCSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -HhcCC-----CCCCCCHHHHHHHHHHHcCCccCCccCcEEEeCCC
Confidence             11112     2368899999999999996543  235 4566554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.94  E-value=1.8e-25  Score=183.08  Aligned_cols=217  Identities=18%  Similarity=0.152  Sum_probs=153.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+++||||+|+||++++++|+++|  +.|++++|+.        +....+.+.  .+.++.++.+|++|.++++++++ 
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~   71 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSE--------APLKKLKEK--YGDRFFYVVGDITEDSVLKQLVNA   71 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCH--------HHHHHHHHH--HGGGEEEEESCTTSHHHHHHHHHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCH--------HHHHHHHHH--hCCceEEEECCCCCHHHHHHHHHH
Confidence            5899999999999999999999885  7888888876        332222211  12478999999999998888876 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++    ++.+  +++|++||..++.+.     
T Consensus        72 ~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~-----  144 (254)
T 3kzv_A           72 AVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYF-----  144 (254)
T ss_dssp             HHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSS-----
T ss_pred             HHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCC-----
Confidence                  57999999998532      111233578999999999998887    4444  799999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCcc-----HHHHHHHHh
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGS-----VRSSLALIL  219 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~~-----~~~~~~~~~  219 (285)
                                       ++...|+.||.+.+.+.+.++.+. ++++++++||.+.++.........     .........
T Consensus       145 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  207 (254)
T 3kzv_A          145 -----------------SSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFR  207 (254)
T ss_dssp             -----------------CCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHH
T ss_pred             -----------------CCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHH
Confidence                             344679999999999999999886 899999999999998644321110     111111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC---CCce-EEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKGR-YICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~-~~~~~~  261 (285)
                      . ..+     ...+.+++|+|+++++++....   ..|. +++.++
T Consensus       208 ~-~~~-----~~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg~  247 (254)
T 3kzv_A          208 G-LKE-----NNQLLDSSVPATVYAKLALHGIPDGVNGQYLSYNDP  247 (254)
T ss_dssp             H-HHT-----TC----CHHHHHHHHHHHHHCCCGGGTTCEEETTCG
T ss_pred             H-HHh-----cCCcCCcccHHHHHHHHHhhcccCCCCccEEEecCc
Confidence            1 111     2268999999999999997653   3454 455554

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.94  E-value=5.4e-25  Score=183.21  Aligned_cols=213  Identities=20%  Similarity=0.207  Sum_probs=152.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|++|||||+|+||++++++|+++|++|++++|+......-.........++...+.++.++.+|++|.+++++++
T Consensus         5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   84 (285)
T 3sc4_A            5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAV   84 (285)
T ss_dssp             -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            45567899999999999999999999999999999998721000000011111111112347899999999999888887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCc
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +       .+|++||+||.....     ..+.++..+++|+.++.++++++.+.   ...++||++||.......     
T Consensus        85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~-----  159 (285)
T 3sc4_A           85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPK-----  159 (285)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGG-----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCC-----
Confidence            6       689999999986531     12223578889999999999988654   125799999998754332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCc-eecCCCCCCCCccHHHHHHHHhcC
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSM-VVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~-v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                      .++...|+.||.+.+.+.+.++.+   .|+++++++||. +.++.        .    ......
T Consensus       160 ----------------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~--------~----~~~~~~  211 (285)
T 3sc4_A          160 ----------------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAA--------V----QNLLGG  211 (285)
T ss_dssp             ----------------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHH--------H----HHHHTS
T ss_pred             ----------------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHH--------H----Hhhccc
Confidence                            023367999999999999999887   489999999994 43331        1    111222


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ..+.     ..+..++|+|+++++++..+.
T Consensus       212 ~~~~-----~r~~~pedvA~~~~~l~s~~~  236 (285)
T 3sc4_A          212 DEAM-----ARSRKPEVYADAAYVVLNKPS  236 (285)
T ss_dssp             CCCC-----TTCBCTHHHHHHHHHHHTSCT
T ss_pred             cccc-----cCCCCHHHHHHHHHHHhCCcc
Confidence            2222     267899999999999998764

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.94  E-value=5.2e-26  Score=192.61  Aligned_cols=239  Identities=15%  Similarity=0.103  Sum_probs=166.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCc--cccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDP--EHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+....  .....+.. ....++...+.++.++.+|++|.+++.+++
T Consensus        26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  105 (322)
T 3qlj_A           26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI  105 (322)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence            357899999999999999999999999999999862000  00001111 111222222357889999999999988887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEeccceeeec
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG---------TVKRVVYTSSNAAVFY  139 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~SS~~~~~~  139 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.-         .-.+||++||..++.+
T Consensus       106 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~  185 (322)
T 3qlj_A          106 QTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQG  185 (322)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHC
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccC
Confidence            6       689999999986531     223335889999999999998875431         0159999999876543


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~  216 (285)
                      .                      ++...|+.||.+.+.+.+.++.+   .|+++++++|| +.++...........    
T Consensus       186 ~----------------------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~----  238 (322)
T 3qlj_A          186 S----------------------VGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA----  238 (322)
T ss_dssp             B----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------
T ss_pred             C----------------------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh----
Confidence            3                      23467999999999999999887   58999999999 766543332211111    


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc------------------ccCHHHHHHHHHhh
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH------------------TLTIQEMAEFLSAK  275 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~------------------~~s~~e~~~~i~~~  275 (285)
                          ..     ...+.+++++|+|.++++++.....  .| .++++++                  .+++.|+++.+.+.
T Consensus       239 ----~~-----~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~  309 (322)
T 3qlj_A          239 ----TQ-----DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADL  309 (322)
T ss_dssp             --------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHH
T ss_pred             ----cc-----ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHH
Confidence                00     1123567899999999999965432  34 4555543                  23778999999887


Q ss_pred             CCC
Q 023244          276 YPE  278 (285)
Q Consensus       276 ~~~  278 (285)
                      ++.
T Consensus       310 ~~~  312 (322)
T 3qlj_A          310 LGK  312 (322)
T ss_dssp             HHH
T ss_pred             hhc
Confidence            763

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.94  E-value=2.2e-25  Score=181.85  Aligned_cols=208  Identities=18%  Similarity=0.186  Sum_probs=150.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.++++++++ 
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~   77 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRV--------EKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS   77 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        222211 1111113478899999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.   .. ++||++||..++.+.       
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~-------  149 (247)
T 2jah_A           78 TVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV-------  149 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-------
T ss_pred             HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-------
Confidence                  589999999975431     11223578999999999998887542   11 799999998764322       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.+.   |+++++++||.+.++..................     
T Consensus       150 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~-----  209 (247)
T 2jah_A          150 ---------------RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRI-----  209 (247)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHHHHT-----
T ss_pred             ---------------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHHhcc-----
Confidence                           234679999999999998888764   899999999999987532211111111111111     


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                          ..+.+++++|+|+++++++..+.
T Consensus       210 ----~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          210 ----SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             ----TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             ----cccCCCCHHHHHHHHHHHhCCCc
Confidence                11125899999999999998654

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.94  E-value=9.3e-25  Score=181.96  Aligned_cols=230  Identities=15%  Similarity=0.109  Sum_probs=159.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcc--------ccCccchhhh-hcCCCCCCCEEEEecCCCChh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE--------HRNSKDLSFL-KNLPGASERLRIFHADLSHPD   74 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~   74 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+...        ..+.+....+ ......+.++.++.+|++|.+
T Consensus        10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~   89 (286)
T 3uve_A           10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD   89 (286)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence            4689999999999999999999999999999998741100        0011111111 111122457999999999999


Q ss_pred             hHHHHhc-------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceee
Q 023244           75 GFDAAIA-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAV  137 (285)
Q Consensus        75 ~~~~~~~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~  137 (285)
                      +++++++       .+|+|||+||.....      ..+.++..+++|+.++.++++++.+.    +..++||++||..++
T Consensus        90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~  169 (286)
T 3uve_A           90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL  169 (286)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence            9888876       589999999975431      12333588999999999998887542    224699999998765


Q ss_pred             eccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC-------
Q 023244          138 FYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF-------  207 (285)
Q Consensus       138 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~-------  207 (285)
                      .+.                      +....|+.||.+.+.+.+.++.+   .|+++++++||.|.++......       
T Consensus       170 ~~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~  227 (286)
T 3uve_A          170 KAY----------------------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRP  227 (286)
T ss_dssp             SCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCT
T ss_pred             cCC----------------------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccc
Confidence            332                      33467999999999999998877   4899999999999988643210       


Q ss_pred             ---CccHHHHHHHH-hcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          208 ---AGSVRSSLALI-LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       208 ---~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                         ........... .....+      ..+.+++|+|+++++++....  ..| .++++++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~p------~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG  282 (286)
T 3uve_A          228 DLENPGPDDMAPICQMFHTLP------IPWVEPIDISNAVLFFASDEARYITGVTLPIDAG  282 (286)
T ss_dssp             TSSSCCHHHHHHHHHTTCSSS------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccccchhhHHHHHHhhhccC------CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCc
Confidence               00000000000 111111      378999999999999997543  235 4566654

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.94  E-value=1.6e-25  Score=184.99  Aligned_cols=206  Identities=15%  Similarity=0.136  Sum_probs=145.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +....+ .+.   ..++.++.+|++|.++++++++ 
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~   95 (272)
T 4dyv_A           27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRL--------DALQETAAEI---GDDALCVPTDVTDPDSVRALFTA   95 (272)
T ss_dssp             -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999976        222222 222   2478899999999999888876 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----C-CccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|+|||+||....      ...+.++..+++|+.++.++++++.+.    + ..++||++||..++.+.    
T Consensus        96 ~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~----  171 (272)
T 4dyv_A           96 TVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPR----  171 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCC----
T ss_pred             HHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCC----
Confidence                  68999999998532      122233588999999988888876543    2 13699999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++.........    ....  .
T Consensus       172 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----~~~~--~  227 (272)
T 4dyv_A          172 ------------------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV----PQAD--L  227 (272)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC----------------------
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc----hhhh--h
Confidence                              34567999999999999998877   4899999999999987532211100    0000  0


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDAK  253 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~  253 (285)
                      .     .....+++++|+|+++++++..+...
T Consensus       228 ~-----~~~~~~~~pedvA~~v~fL~s~~~~~  254 (272)
T 4dyv_A          228 S-----IKVEPVMDVAHVASAVVYMASLPLDA  254 (272)
T ss_dssp             -------------CHHHHHHHHHHHHHSCTTS
T ss_pred             c-----ccccCCCCHHHHHHHHHHHhCCCCcC
Confidence            0     11225889999999999999977653

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.94  E-value=2e-25  Score=180.62  Aligned_cols=197  Identities=22%  Similarity=0.165  Sum_probs=146.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+.        +....+.+..  ..++.++.+|++|.++++++++   
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~   72 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRY--------QRLQQQELLL--GNAVIGIVADLAHHEDVDVAFAAAV   72 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH--GGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh--cCCceEEECCCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999999999986        2222222111  1268899999999998888776   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                          .+|+|||+||.....     ..+.++..+++|+.++.++++++.+.  ....++|++||..++.+.          
T Consensus        73 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~----------  142 (235)
T 3l6e_A           73 EWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK----------  142 (235)
T ss_dssp             HHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC----------
T ss_pred             HhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC----------
Confidence                479999999985431     22333588999999999888887542  112499999998765433          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                                  ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++......            .  ..   
T Consensus       143 ------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~------------~--~~---  193 (235)
T 3l6e_A          143 ------------ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD------------H--VD---  193 (235)
T ss_dssp             ------------SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------
T ss_pred             ------------CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC------------C--CC---
Confidence                        234579999999999999998874   799999999999887422110            0  00   


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                        ...+++++|+|+.+++++..+..
T Consensus       194 --~~~~~~pedvA~~v~~l~~~~~~  216 (235)
T 3l6e_A          194 --PSGFMTPEDAAAYMLDALEARSS  216 (235)
T ss_dssp             -----CBCHHHHHHHHHHHTCCCSS
T ss_pred             --CcCCCCHHHHHHHHHHHHhCCCC
Confidence              11579999999999999986643

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.94  E-value=3.3e-26  Score=188.22  Aligned_cols=224  Identities=11%  Similarity=0.131  Sum_probs=153.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|..     .+.+.... ..++...+.++.++.+|++|.++++++++ 
T Consensus        10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A           10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQA-----KDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCG-----GGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCc-----cCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            458999999999999999999999999999998864     11122221 11222224578999999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|+|||+||.....     ..+.++..+++|+.++.++++++.+. ...+++|++||..++.+.         
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~---------  155 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYT---------  155 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHH---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCC---------
Confidence                  579999999975431     12333588999999999999999874 115799999998765433         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.||.+.+.+.+.++.++   |+++++++||.|.++..........   .. ......+  
T Consensus       156 -------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~---~~-~~~~~~~--  216 (262)
T 3ksu_A          156 -------------GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKES---TA-FHKSQAM--  216 (262)
T ss_dssp             -------------CCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC----------------C--
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHH---HH-HHHhcCc--
Confidence                         233569999999999999999885   7999999999998764221110000   00 0011111  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC-CCce-EEEecccc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD-AKGR-YICSSHTL  263 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~-~~~~~~~~  263 (285)
                         ...+.+++|+|+++++++.... ..|. +++.|+..
T Consensus       217 ---~~r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg~~  252 (262)
T 3ksu_A          217 ---GNQLTKIEDIAPIIKFLTTDGWWINGQTIFANGGYT  252 (262)
T ss_dssp             ---CCCSCCGGGTHHHHHHHHTTTTTCCSCEEEESTTCC
T ss_pred             ---ccCCCCHHHHHHHHHHHcCCCCCccCCEEEECCCcc
Confidence               2368899999999999997621 2354 56776543

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=99.94  E-value=5.5e-26  Score=188.17  Aligned_cols=222  Identities=16%  Similarity=0.055  Sum_probs=156.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+..       .......++...+.++.++.+|++|.+++.++++  
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~  104 (275)
T 4imr_A           32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPG-------STAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERA  104 (275)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTT-------TTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH-------HHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence            4689999999999999999999999999999999871       1111111111124578999999999998888776  


Q ss_pred             ----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|++||+||....     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++...        
T Consensus       105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~--------  175 (275)
T 4imr_A          105 EAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPK--------  175 (275)
T ss_dssp             HHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC--------
T ss_pred             HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCC--------
Confidence                58999999997543     1222335889999999999988873    344 5799999998765321        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++......... ............+ 
T Consensus       176 --------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~p-  239 (275)
T 4imr_A          176 --------------SVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD-PEGWDEYVRTLNW-  239 (275)
T ss_dssp             --------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC-HHHHHHHHHHHST-
T ss_pred             --------------CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC-hHHHHHHHhhcCc-
Confidence                          234569999999999999998875   899999999999886321100000 0000111111001 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          ...+..++|+|+++++++....  ..| .++++++
T Consensus       240 ----~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  274 (275)
T 4imr_A          240 ----MGRAGRPEEMVGAALFLASEACSFMTGETIFLTGG  274 (275)
T ss_dssp             ----TCSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESSC
T ss_pred             ----cCCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCCC
Confidence                2267899999999999997543  234 4556553

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=2.6e-25  Score=183.75  Aligned_cols=221  Identities=17%  Similarity=0.156  Sum_probs=156.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +....+. +.    .++.++.+|++|.++++++++ 
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~   75 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE--------SGGRALEQEL----PGAVFILCDVTQEDDVKTLVSE   75 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh----cCCeEEEcCCCCHHHHHHHHHH
Confidence            357999999999999999999999999999999976        3322222 22    147889999999999888876 


Q ss_pred             ------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|+|||+||.....      ..+.++..+++|+.++.++++++.+.   + .++||++||..+..+.      
T Consensus        76 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------  148 (270)
T 1yde_A           76 TIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ------  148 (270)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccCCC------
Confidence                  589999999975421      11223588999999999999888642   2 4799999998754332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCC---CCccHHHHHHHHhc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPK---FAGSVRSSLALILG  220 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~---~~~~~~~~~~~~~~  220 (285)
                                      +....|+.||.+.+.+.+.++.+   +|++++++|||.+++|.....   ..............
T Consensus       149 ----------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  212 (270)
T 1yde_A          149 ----------------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLA  212 (270)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHT
T ss_pred             ----------------CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhc
Confidence                            23457999999999999998876   489999999999999742110   01111111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC-CCCc-eEEEecc-ccCHH
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP-DAKG-RYICSSH-TLTIQ  266 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~-~~~~-~~~~~~~-~~s~~  266 (285)
                        .++     ..+.+++|+|+++++++... ...| .+.+.++ .....
T Consensus       213 --~p~-----~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~  254 (270)
T 1yde_A          213 --QPL-----GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYG  254 (270)
T ss_dssp             --STT-----SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC-
T ss_pred             --CCC-----CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccC
Confidence              122     25789999999999998752 2235 4566554 44433

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.94  E-value=2.4e-25  Score=181.90  Aligned_cols=205  Identities=20%  Similarity=0.174  Sum_probs=147.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|++|||||+|+||++++++|+++|++|++++|+..    ...+....+........++.++.+|++|.+++.++++ 
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQ----NLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHH----HHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            35789999999999999999999999999999999861    0011111121111112478899999999998888775 


Q ss_pred             ------CCCEEEEecccCCCCC-C---ChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFED-K---EPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~~-~---~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+||...... +   +.++..+++|+.++.++++++.    +.+ .+++|++||..++.+.       
T Consensus        81 ~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-------  152 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGF-------  152 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC--------------
T ss_pred             HHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCC-------
Confidence                  4799999999854311 1   2235789999999999888873    344 5799999998865432       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++....             .....+
T Consensus       153 ---------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------------~~~~~~  204 (250)
T 3nyw_A          153 ---------------ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKK-------------AGTPFK  204 (250)
T ss_dssp             ---------------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHH-------------TTCCSC
T ss_pred             ---------------CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhh-------------cCCCcc
Confidence                           224679999999999999988774   8999999999998752110             111111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                           ...+++++|+|+++++++..+..
T Consensus       205 -----~~~~~~p~dva~~v~~l~s~~~~  227 (250)
T 3nyw_A          205 -----DEEMIQPDDLLNTIRCLLNLSEN  227 (250)
T ss_dssp             -----GGGSBCHHHHHHHHHHHHTSCTT
T ss_pred             -----cccCCCHHHHHHHHHHHHcCCCc
Confidence                 12589999999999999987653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.93  E-value=2e-25  Score=180.13  Aligned_cols=197  Identities=18%  Similarity=0.149  Sum_probs=145.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC-   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-   83 (285)
                      ||+||||||+|+||++++++|+++|++|++++|+.        +....+.+..  ..++.++.+|++|.++++++++.+ 
T Consensus         1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~   70 (230)
T 3guy_A            1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSE--------SKLSTVTNCL--SNNVGYRARDLASHQEVEQLFEQLD   70 (230)
T ss_dssp             --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHTC--SSCCCEEECCTTCHHHHHHHHHSCS
T ss_pred             CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHH--hhccCeEeecCCCHHHHHHHHHHHh
Confidence            46899999999999999999999999999999987        3333332211  347889999999999999998764 


Q ss_pred             ---CEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           84 ---TGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        84 ---d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                         |+|||+||.....     ..+..+..+++|+.++.++++++.+.-  ...++|++||..++...             
T Consensus        71 ~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~-------------  137 (230)
T 3guy_A           71 SIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPK-------------  137 (230)
T ss_dssp             SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCC-------------
T ss_pred             hcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCC-------------
Confidence               9999999975431     122335889999999999999876541  12399999998765332             


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                               ++...|+.||.+.+.+.+.++.++   |++++.++||.+.++......             ...+     .
T Consensus       138 ---------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-------------~~~~-----~  190 (230)
T 3guy_A          138 ---------AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG-------------KSLD-----T  190 (230)
T ss_dssp             ---------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC--------------------------------
T ss_pred             ---------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC-------------CCCC-----c
Confidence                     344679999999999999999885   799999999999887422110             0111     2


Q ss_pred             cceeeHHHHHHHHHHhhcCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ..+++++|+|+++++++.++.
T Consensus       191 ~~~~~~~dvA~~i~~l~~~~~  211 (230)
T 3guy_A          191 SSFMSAEDAALMIHGALANIG  211 (230)
T ss_dssp             --CCCHHHHHHHHHHHCCEET
T ss_pred             ccCCCHHHHHHHHHHHHhCcC
Confidence            268999999999999997654

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=99.93  E-value=1.3e-25  Score=186.33  Aligned_cols=220  Identities=13%  Similarity=0.126  Sum_probs=157.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||+|+||++++++|+++|++|++++|+.        +... ...++. ..+.++.++.+|++|.++++++++
T Consensus        26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   97 (277)
T 4fc7_A           26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSL--------PRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD   97 (277)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence            468999999999999999999999999999999976        2211 111110 013478999999999998888776


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||....     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.     
T Consensus        98 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  171 (277)
T 4fc7_A           98 QALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQ-----  171 (277)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTC-----
T ss_pred             HHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCC-----
Confidence                   58999999996443     12233458899999999999998743    33 4799999998765433     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||.+.+.+.+.++.++   |+++++++||.|.++...................  
T Consensus       172 -----------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~--  232 (277)
T 4fc7_A          172 -----------------ALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTA--  232 (277)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHT--
T ss_pred             -----------------CCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhcc--
Confidence                             234679999999999999988775   8999999999999873211111111111111111  


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       233 ~p-----~~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdGG  269 (277)
T 4fc7_A          233 SP-----LQRLGNKTEIAHSVLYLASPLASYVTGAVLVADGG  269 (277)
T ss_dssp             ST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCcCHHHHHHHHHHHcCCccCCcCCCEEEECCC
Confidence            12     2368899999999999997533  235 4566654

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.93  E-value=3.2e-25  Score=184.58  Aligned_cols=217  Identities=15%  Similarity=0.166  Sum_probs=156.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhh-cCC--CCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLK-NLP--GASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .+|++|||||+|+||++++++|+++|+   +|++++|+.        +....+. ++.  ..+.++.++.+|++|.++++
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~  103 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRL--------EKLEELKKTIDQEFPNAKVHVAQLDITQAEKIK  103 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHH
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCH--------HHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHH
Confidence            468999999999999999999999987   999999976        2222211 110  11347889999999999999


Q ss_pred             HHhc-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeecc
Q 023244           78 AAIA-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~  140 (285)
                      ++++       .+|+|||+||....      ...+.++..+++|+.++.++++++    ++.+ .++||++||..++.+.
T Consensus       104 ~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~  182 (287)
T 3rku_A          104 PFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAY  182 (287)
T ss_dssp             HHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC
T ss_pred             HHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCC
Confidence            9886       37999999997542      112233588999999999999887    3445 6899999998765332


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++................
T Consensus       183 ----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~  240 (287)
T 3rku_A          183 ----------------------PTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNV  240 (287)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHH
T ss_pred             ----------------------CCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHh
Confidence                                  33467999999999999999988   48999999999999874211000111111111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC---CceEEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KGRYICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~~~~~~~~  261 (285)
                      ...          ..++.++|+|+++++++..+..   +..+++.++
T Consensus       241 ~~~----------~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~~g  277 (287)
T 3rku_A          241 YKD----------TTPLMADDVADLIVYATSRKQNTVIADTLIFPTN  277 (287)
T ss_dssp             HTT----------SCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred             hcc----------cCCCCHHHHHHHHHHHhCCCCCeEecceEEeeCC
Confidence            111          1356999999999999987654   234555443

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=1.6e-25  Score=185.88  Aligned_cols=208  Identities=17%  Similarity=0.159  Sum_probs=147.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh----hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +....    +... ....++.++.+|++|.+++.++
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~  101 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV--------GNIEELAAECKSA-GYPGTLIPYRCDLSNEEDILSM  101 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHT-TCSSEEEEEECCTTCHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCh--------HHHHHHHHHHHhc-CCCceEEEEEecCCCHHHHHHH
Confidence            357899999999999999999999999999999976        22221    2111 1123688899999999998887


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHH----HHHHHHHHHhcCCc--cEEEEeccceeeeccC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAING----TLGILKSCLKSGTV--KRVVYTSSNAAVFYND  141 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~--~~~v~~SS~~~~~~~~  141 (285)
                      ++       .+|+|||+||.....     ..+..+..+++|+.+    ++.+++.+++.+ .  ++||++||..++...+
T Consensus       102 ~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~~~~  180 (279)
T 1xg5_A          102 FSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHRVLP  180 (279)
T ss_dssp             HHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTSCCS
T ss_pred             HHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcccCC
Confidence            76       689999999975431     122335789999999    667777777766 4  7999999987542110


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA  216 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~  216 (285)
                                          .++...|+.+|.+.+.+++.++.+     .++++++++||.|.++...............
T Consensus       181 --------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~  240 (279)
T 1xg5_A          181 --------------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA  240 (279)
T ss_dssp             --------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH
T ss_pred             --------------------CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh
Confidence                                123457999999999988887765     3799999999999887421100101000000


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .          .....+++++|+|+++++++..+.
T Consensus       241 ~----------~~~~~~~~~~dvA~~i~~l~~~~~  265 (279)
T 1xg5_A          241 T----------YEQMKCLKPEDVAEAVIYVLSTPA  265 (279)
T ss_dssp             H----------HC---CBCHHHHHHHHHHHHHSCT
T ss_pred             h----------cccccCCCHHHHHHHHHHHhcCCc
Confidence            0          012257899999999999998654

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=99.93  E-value=5.2e-25  Score=183.94  Aligned_cols=220  Identities=12%  Similarity=0.018  Sum_probs=155.7

Q ss_pred             CCCeEEEecCCch--hHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGF--IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+|+  ||++++++|+++|++|++++|+.        +....+.+......++.++.+|++|.++++++++
T Consensus        30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  101 (293)
T 3grk_A           30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGD--------ALKKRVEPLAEELGAFVAGHCDVADAASIDAVFE  101 (293)
T ss_dssp             TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSH--------HHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHH
Confidence            4689999999988  99999999999999999999875        2222222111111368899999999999888876


Q ss_pred             -------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|+|||+||....         ...+.+...+++|+.++.++++++.+.- +.++||++||..++...    
T Consensus       102 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----  177 (293)
T 3grk_A          102 TLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVM----  177 (293)
T ss_dssp             HHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBC----
T ss_pred             HHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCC----
Confidence                   57999999998641         1223335889999999999999987642 24699999998765432    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.++   |+++++++||.|.++..... ... ........ .
T Consensus       178 ------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~-~~~~~~~~-~  236 (293)
T 3grk_A          178 ------------------PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGI-GDF-RYILKWNE-Y  236 (293)
T ss_dssp             ------------------TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-------CCH-HHHHHHHH-H
T ss_pred             ------------------CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcc-cch-HHHHHHHH-h
Confidence                              234679999999999999998774   89999999999998753321 111 11111111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+.     ..+..++|+|+++++++....  ..| .++++++
T Consensus       237 ~~p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  274 (293)
T 3grk_A          237 NAPL-----RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADSG  274 (293)
T ss_dssp             HSTT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCC-----CCCCCHHHHHHHHHHHcCccccCCcceEEEECCC
Confidence            1122     268899999999999997543  235 4566654

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.93  E-value=3.8e-26  Score=187.04  Aligned_cols=215  Identities=15%  Similarity=0.130  Sum_probs=152.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+.        +....+ .++   +.++.++.+|++|.++++++++.
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~   73 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE--------AAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        222222 122   23788999999999988887753


Q ss_pred             -------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           83 -------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 -------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             +|+|||+||.....     ..+.++..+++|+.++.++.+++    ++.+  ++||++||..++...      
T Consensus        74 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~------  145 (253)
T 1hxh_A           74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPI------  145 (253)
T ss_dssp             HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCC------
T ss_pred             HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCC------
Confidence                   69999999975431     11233578999998877766654    3344  799999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCC-CccHHHHHHHHhc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKF-AGSVRSSLALILG  220 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~~~~~  220 (285)
                                      ++...|+.||.+.+.+.+.++.+.     |++++++|||.+++|...... ......   ....
T Consensus       146 ----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~  206 (253)
T 1hxh_A          146 ----------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE---MVLH  206 (253)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH---HHBC
T ss_pred             ----------------CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHH---HHhh
Confidence                            234679999999999998887663     899999999999997421100 000000   0111


Q ss_pred             C--ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 N--REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~--~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .  ..+     ...+.+++|+|+++++++..+.  ..| .+++.++
T Consensus       207 ~~~~~p-----~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  247 (253)
T 1hxh_A          207 DPKLNR-----AGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             BTTTBT-----TCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             hhccCc-----cCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence            0  111     2368999999999999997543  235 4566655

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.93  E-value=1.2e-24  Score=182.35  Aligned_cols=230  Identities=16%  Similarity=0.101  Sum_probs=159.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcc----ccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE----HRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.....    ..+.+... ...++...+.++.++.+|++|.+++++
T Consensus        27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~  106 (299)
T 3t7c_A           27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA  106 (299)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence            4689999999999999999999999999999998741000    00011111 111111224578999999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccC
Q 023244           79 AIA-------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~  141 (285)
                      +++       .+|+|||+||.....      ..+.++..+++|+.++.++++++...    +..++||++||..++.+. 
T Consensus       107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~-  185 (299)
T 3t7c_A          107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGA-  185 (299)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC-
Confidence            876       589999999975431      12233588999999999999886543    225799999998765332 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----------CC
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----------FA  208 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----------~~  208 (285)
                                           +....|+.||.+.+.+.+.++.++   |+++++++||.|.+|.....          ..
T Consensus       186 ---------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  244 (299)
T 3t7c_A          186 ---------------------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLEN  244 (299)
T ss_dssp             ---------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSS
T ss_pred             ---------------------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhcc
Confidence                                 234679999999999999998875   89999999999999864321          00


Q ss_pred             ccHHHHHHH-HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          209 GSVRSSLAL-ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       209 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      .....+... ......+      ..+..++|+|+++++++....  ..| .++++++
T Consensus       245 ~~~~~~~~~~~~~~~~p------~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG  295 (299)
T 3t7c_A          245 PTVEDFQVASRQMHVLP------IPYVEPADISNAILFLVSDDARYITGVSLPVDGG  295 (299)
T ss_dssp             CCHHHHHHHHHHHSSSS------CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             chhhHHHHHhhhhcccC------cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCC
Confidence            011111000 0111111      368899999999999997543  234 4566654

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.93  E-value=8.4e-25  Score=177.53  Aligned_cols=212  Identities=18%  Similarity=0.189  Sum_probs=151.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|+++||||||+||++++++|+++|++|++++|+.        +..  ..++     ++.++.+|++| +++.++++   
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~--------~~~--~~~~-----~~~~~~~D~~~-~~~~~~~~~~~   65 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNP--------EEA--AQSL-----GAVPLPTDLEK-DDPKGLVKRAL   65 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------HHH--HHHH-----TCEEEECCTTT-SCHHHHHHHHH
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHH--HHhh-----CcEEEecCCch-HHHHHHHHHHH
Confidence            57999999999999999999999999999999987        221  1112     26788999999 77766654   


Q ss_pred             ----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|+|||+||.....     ..+.++..+++|+.++.++++++.    +.+ .++||++||..++....       
T Consensus        66 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~-------  137 (239)
T 2ekp_A           66 EALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGG-------  137 (239)
T ss_dssp             HHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT-------
T ss_pred             HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCC-------
Confidence                589999999975431     122335889999999988888874    445 68999999987653220       


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                   .++...|+.||.+.+.+.+.++.+.   |++++++|||.+.++....... . ......... ..+ 
T Consensus       138 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~-~~p-  200 (239)
T 2ekp_A          138 -------------PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ-N-PELYEPITA-RIP-  200 (239)
T ss_dssp             -------------TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT-C-HHHHHHHHT-TCT-
T ss_pred             -------------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc-C-HHHHHHHHh-cCC-
Confidence                         0234679999999999999988775   8999999999999874221000 0 111111111 112 


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                          ...+.+++|+|+++++++....  ..|. +++.++
T Consensus       201 ----~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG  235 (239)
T 2ekp_A          201 ----MGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDGG  235 (239)
T ss_dssp             ----TSSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ----CCCCcCHHHHHHHHHHHcCchhcCCCCCEEEECCC
Confidence                2268999999999999997532  2354 556554

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.93  E-value=6.9e-25  Score=185.21  Aligned_cols=231  Identities=16%  Similarity=0.144  Sum_probs=157.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc----cCccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH----RNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+......    ...+.... .......+.++.++.+|++|.+++++
T Consensus        45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  124 (317)
T 3oec_A           45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA  124 (317)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence            45899999999999999999999999999999886311100    00111111 11111124578999999999998888


Q ss_pred             Hhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCC
Q 023244           79 AIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      +++       .+|+|||+||.....     ..+.++..+++|+.++.++++++.+    .+..++||++||..++.+.  
T Consensus       125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~--  202 (317)
T 3oec_A          125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGA--  202 (317)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCC--
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCC--
Confidence            876       589999999976531     1223358899999999998888743    3324689999998865433  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC---------CCc-
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK---------FAG-  209 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~---------~~~-  209 (285)
                                          ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++.....         ... 
T Consensus       203 --------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  262 (317)
T 3oec_A          203 --------------------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENP  262 (317)
T ss_dssp             --------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSC
T ss_pred             --------------------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhcccc
Confidence                                234679999999999999998874   89999999999998742110         000 


Q ss_pred             cHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          210 SVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ......... .....    ....|++++|+|+++++++....  ..| .++++++
T Consensus       263 ~~~~~~~~~-~~~~~----~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG  312 (317)
T 3oec_A          263 TREDAAELF-SQLTL----LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGG  312 (317)
T ss_dssp             CHHHHHHHH-TTTCS----SSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             chhHHHHHH-hhhcc----CCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcc
Confidence            000001111 11101    11478999999999999996543  234 4667654

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=2e-25  Score=187.59  Aligned_cols=224  Identities=13%  Similarity=0.107  Sum_probs=155.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC-C-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-P-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+..    ...+....+... . ....++.++.+|++|.+++.++++
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~----~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~   92 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE----RLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   92 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH----HHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHH
Confidence            3589999999999999999999999999999999761    000111112110 0 123478999999999999888876


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+..+..+++|+.++.++++++.+    .+ .+++|++||.. ..+.     
T Consensus        93 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~-----  165 (303)
T 1yxm_A           93 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGF-----  165 (303)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCC-----
Confidence                   389999999964321     1122357899999999999999765    22 47899999986 3221     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|...+.+.+.++.++   |++++++|||.++|+.................. ..
T Consensus       166 -----------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~  227 (303)
T 1yxm_A          166 -----------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSF-QK  227 (303)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGG-GG
T ss_pred             -----------------CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHH-hc
Confidence                             234579999999999999988775   899999999999998421111100000000000 00


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                           .....+.+++|+|+++++++....  ..| .++++++
T Consensus       228 -----~p~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG  264 (303)
T 1yxm_A          228 -----IPAKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  264 (303)
T ss_dssp             -----STTSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CcccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence                 112358999999999999996533  234 4666654

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.93  E-value=1e-24  Score=179.83  Aligned_cols=223  Identities=13%  Similarity=0.058  Sum_probs=159.7

Q ss_pred             CCCCeEEEecCCch--hHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGF--IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .++|+++||||+|+  ||++++++|+++|++|++++|+.     ...+....+.... ...++.++.+|++|.+++++++
T Consensus         5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-----~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~   78 (266)
T 3oig_A            5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE-----RLEKSVHELAGTL-DRNDSIILPCDVTNDAEIETCF   78 (266)
T ss_dssp             CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHHTS-SSCCCEEEECCCSSSHHHHHHH
T ss_pred             cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch-----HHHHHHHHHHHhc-CCCCceEEeCCCCCHHHHHHHH
Confidence            45789999999988  99999999999999999999875     2212222222211 1237899999999999888887


Q ss_pred             c-------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|+|||+||....         ...+.....+++|+.++.++++++.+.- +-++||++||..++.+.   
T Consensus        79 ~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---  155 (266)
T 3oig_A           79 ASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVM---  155 (266)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCC---
T ss_pred             HHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccC---
Confidence            6       47999999997641         1122335788999999999999998752 23699999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         +....|+.||.+.+.+.+.++.++   |+++++++||.|.++...... .. .........
T Consensus       156 -------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~-~~~~~~~~~  214 (266)
T 3oig_A          156 -------------------PNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS-DF-NSILKDIEE  214 (266)
T ss_dssp             -------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-TH-HHHHHHHHH
T ss_pred             -------------------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc-ch-HHHHHHHHh
Confidence                               334679999999999999988774   799999999999987543321 11 111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       ..+.     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       215 -~~~~-----~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdGG  252 (266)
T 3oig_A          215 -RAPL-----RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDSG  252 (266)
T ss_dssp             -HSTT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCCC-----CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECCC
Confidence             1122     268899999999999997543  334 4566654

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.93  E-value=2.8e-25  Score=187.69  Aligned_cols=240  Identities=15%  Similarity=0.140  Sum_probs=154.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCC--CCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP--GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+||||||||+||++++++|+++|++|++++|+.        +....+ ..+.  ....++.++.+|++|.+++.+++
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~   78 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQ--------DSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA   78 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence            457999999999999999999999999999999986        222211 1111  11237899999999999888887


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcC---------CccEEEEeccceeeec
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSG---------TVKRVVYTSSNAAVFY  139 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~SS~~~~~~  139 (285)
                      +       .+|+|||+||.....     ..+..+..+++|+.++.++++++.+..         ..++||++||..++..
T Consensus        79 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~  158 (319)
T 3ioy_A           79 DEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLA  158 (319)
T ss_dssp             HHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCC
T ss_pred             HHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccC
Confidence            6       469999999975431     223345889999999999988875431         1468999999886543


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCC--CccHHHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKF--AGSVRSS  214 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~  214 (285)
                      .                      +....|+.||.+.+.+.+.++.+   .|+++++++||.|.++......  ...+...
T Consensus       159 ~----------------------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~  216 (319)
T 3ioy_A          159 A----------------------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGE  216 (319)
T ss_dssp             C----------------------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------
T ss_pred             C----------------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhccc
Confidence            3                      23467999999777666666554   4899999999999987533211  0010000


Q ss_pred             HHHHhcCc-cccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEeccc--cCHHHHHHHHHhhCC
Q 023244          215 LALILGNR-EEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHT--LTIQEMAEFLSAKYP  277 (285)
Q Consensus       215 ~~~~~~~~-~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~--~s~~e~~~~i~~~~~  277 (285)
                      ........ ..+. ......++++|+|+.++.+++.+.   .+.+.+..  -.+++.+..+...++
T Consensus       217 ~~~~~~~~~~~~~-~~~~~~~~pe~vA~~~~~al~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 3ioy_A          217 VKPVDKTAVERLA-GVHEFGMEPDVIGARVIEAMKANR---LHIFSHPDHKEELREVFDEIIAEYQ  278 (319)
T ss_dssp             ------------C-CGGGSSBCHHHHHHHHHHHHHTTC---SEECCCSTTHHHHHHHHHHHHHTCC
T ss_pred             ccchhHHHHHHHH-HhhhcCCCHHHHHHHHHHHHHcCC---CEEEcCHHHHHHHHHHHHHHHHhhh
Confidence            00000000 0000 111123899999999999998753   33333322  234555555555555

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.93  E-value=3.9e-25  Score=180.54  Aligned_cols=207  Identities=14%  Similarity=0.066  Sum_probs=146.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+||||||+|+||++++++|+++|++|++++|+.        +...   ++    ..+.++ +|+  .++++++++  
T Consensus        18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~--------~~~~---~~----~~~~~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--------ELLK---RS----GHRYVV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHH---HT----CSEEEE-CCT--TTCHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH--------HHHH---hh----CCeEEE-eeH--HHHHHHHHHHh
Confidence            568999999999999999999999999999999975        2222   22    156677 999  344555544  


Q ss_pred             -CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHH----HHHhcCCccEEEEeccceeeeccCCCCcccccCC
Q 023244           82 -GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILK----SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        82 -~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                       .+|+|||+||.....     ..+..+..+++|+.++.++.+    .+++.+ .++||++||..++...           
T Consensus        80 ~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----------  147 (249)
T 1o5i_A           80 KEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPI-----------  147 (249)
T ss_dssp             CCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----------
T ss_pred             cCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCC-----------
Confidence             789999999975431     122335888999998776654    455556 6899999998865332           


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCcccccc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYGF  227 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~  227 (285)
                                 ++...|+.||.+.+.+.+.++.+   .|++++++|||.++++........    ... .... ..+   
T Consensus       148 -----------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~----~~~~~~~~-~~p---  208 (249)
T 1o5i_A          148 -----------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE----EKKKQVES-QIP---  208 (249)
T ss_dssp             -----------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH----HHHHHHHT-TST---
T ss_pred             -----------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchh----hHHHHHHh-cCC---
Confidence                       23467999999999999988876   489999999999999853211110    111 1111 112   


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                        ...+++++|+|+++++++....  ..| .++++++
T Consensus       209 --~~~~~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG  243 (249)
T 1o5i_A          209 --MRRMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  243 (249)
T ss_dssp             --TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             --CCCCcCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence              2368999999999999997542  234 4667665

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=99.93  E-value=2.7e-24  Score=172.53  Aligned_cols=212  Identities=16%  Similarity=0.132  Sum_probs=155.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||++.||+.+++.|+++|++|++++|+.        +....     ....++..+.+|++|+++++++++  
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~--------~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDA--------DGVHA-----PRHPRIRREELDITDSQRLQRLFEAL   76 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------TSTTS-----CCCTTEEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHhh-----hhcCCeEEEEecCCCHHHHHHHHHhc
Confidence            479999999999999999999999999999999987        22111     123478899999999999999887  


Q ss_pred             -CCCEEEEecccCCC----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           82 -GCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        82 -~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                       .+|++||+||....    +.++ ++..+++|+.++..+.+++.+    .+  .++|++||.....+.            
T Consensus        77 g~iDiLVNNAGi~~~~~~~~~~~-w~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~------------  141 (242)
T 4b79_A           77 PRLDVLVNNAGISRDREEYDLAT-FERVLRLNLSAAMLASQLARPLLAQRG--GSILNIASMYSTFGS------------  141 (242)
T ss_dssp             SCCSEEEECCCCCCGGGGGSHHH-HHHHHHHHTHHHHHHHHHHHHHHHHHC--EEEEEECCGGGTSCC------------
T ss_pred             CCCCEEEECCCCCCCcccCCHHH-HHHHHHHhhHHHHHHHHHHHHHHHHcC--CeEEEEeeccccCCC------------
Confidence             47999999997554    2223 358899999998888777643    34  799999998765333            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL  229 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                +....|+.||.....+.+.++.++   ||+++.|.||.|.+|........ ... ...+.. ..++.   
T Consensus       142 ----------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~-~~~-~~~~~~-~~Plg---  205 (242)
T 4b79_A          142 ----------ADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKAD-VEA-TRRIMQ-RTPLA---  205 (242)
T ss_dssp             ----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCC-HHH-HHHHHH-TCTTC---
T ss_pred             ----------CCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCC-HHH-HHHHHh-cCCCC---
Confidence                      234679999999999998888774   89999999999998854332111 111 111111 12333   


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                        .+..++|+|.++++++.....  .|. +.+.|+
T Consensus       206 --R~g~peeiA~~v~fLaSd~a~~iTG~~l~VDGG  238 (242)
T 4b79_A          206 --RWGEAPEVASAAAFLCGPGASFVTGAVLAVDGG  238 (242)
T ss_dssp             --SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCccCceEEECcc
Confidence              688999999999999965432  454 455554

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=99.93  E-value=1e-24  Score=177.62  Aligned_cols=223  Identities=22%  Similarity=0.226  Sum_probs=156.6

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..++|++|||||++.||+.+++.|+++|.+|++++|+.        +.....++......++.++.+|++|+++++++++
T Consensus         4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~   75 (258)
T 4gkb_A            4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHA--------PDGAFLDALAQRQPRATYLPVELQDDAQCRDAVA   75 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC--------CCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCc--------ccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHH
Confidence            45689999999999999999999999999999999987        2222222221223578899999999998887765


Q ss_pred             -------CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 -------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             .+|++||+||.....    ..+.++..+++|+.++..+.+++.    +.+  .++|++||..+..+.      
T Consensus        76 ~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~--G~IVnisS~~~~~~~------  147 (258)
T 4gkb_A           76 QTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATR--GAIVNISSKTAVTGQ------  147 (258)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTHHHHCC------
T ss_pred             HHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC--CeEEEEeehhhccCC------
Confidence                   479999999975431    122345889999999888877764    333  799999998865443      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc--HHHHHHHHhcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS--VRSSLALILGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~--~~~~~~~~~~~  221 (285)
                                      +....|+.||.....+.+.++.++   ||+++.|.||.|.+|.........  ...........
T Consensus       148 ----------------~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~  211 (258)
T 4gkb_A          148 ----------------GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAK  211 (258)
T ss_dssp             ----------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTT
T ss_pred             ----------------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhc
Confidence                            334679999999999998888774   899999999999888543321110  00011111111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                       .++    .+.+..++|+|.++++++.....  .|. +.+.|+
T Consensus       212 -~pl----g~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDGG  249 (258)
T 4gkb_A          212 -VPL----GRRFTTPDEIADTAVFLLSPRASHTTGEWLFVDGG  249 (258)
T ss_dssp             -CTT----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCC----CCCCcCHHHHHHHHHHHhCchhcCccCCeEEECCC
Confidence             111    12688999999999999965432  454 455554

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=3.5e-25  Score=182.78  Aligned_cols=223  Identities=15%  Similarity=0.055  Sum_probs=151.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC--CCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG--ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++..  ...++.++.+|++|+++++++++
T Consensus         7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~   78 (267)
T 2gdz_A            7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL--------EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFR   78 (267)
T ss_dssp             TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHH
T ss_pred             CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHH
Confidence            57899999999999999999999999999999976        22211 111111  12468899999999998888876


Q ss_pred             C-------CCEEEEecccCCCCCCChHHHHHHHHHHHHHH----HHHHHHhcC--CccEEEEeccceeeeccCCCCcccc
Q 023244           82 G-------CTGVLHVATPVDFEDKEPEEVITQRAINGTLG----ILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ~-------~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~----l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                      .       +|+|||+||....  +++ +..+++|+.++..    +++.+++.+  ..++||++||..++...        
T Consensus        79 ~~~~~~g~id~lv~~Ag~~~~--~~~-~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--------  147 (267)
T 2gdz_A           79 KVVDHFGRLDILVNNAGVNNE--KNW-EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--------  147 (267)
T ss_dssp             HHHHHHSCCCEEEECCCCCCS--SSH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC--------
T ss_pred             HHHHHcCCCCEEEECCCCCCh--hhH-HHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC--------
Confidence            3       6999999997643  344 5889999886555    455554432  14799999998765332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHH--H---HcCCcEEEeccCceecCCCCCCCCcc-HHH---HHHHHh
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA--E---EHGLDLVTLIPSMVVGPFICPKFAGS-VRS---SLALIL  219 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~--~---~~~i~~~i~Rp~~v~g~~~~~~~~~~-~~~---~~~~~~  219 (285)
                                    ++...|+.||.+.+.+.+.++  .   ..|+++++++||.+.++......... ...   ......
T Consensus       148 --------------~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~  213 (267)
T 2gdz_A          148 --------------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIK  213 (267)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHH
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHH
Confidence                          234579999999999888742  2   35899999999999887421100000 000   000000


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEec-cccCHH
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSS-HTLTIQ  266 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~-~~~s~~  266 (285)
                       .  .   .....+++++|+|+++++++......| .+++++ +.+++.
T Consensus       214 -~--~---~~~~~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~  256 (267)
T 2gdz_A          214 -D--M---IKYYGILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQ  256 (267)
T ss_dssp             -H--H---HHHHCCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEEC
T ss_pred             -H--H---hccccCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCccccc
Confidence             0  0   112357899999999999998765555 466654 445543

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.93  E-value=1.1e-24  Score=180.95  Aligned_cols=219  Identities=11%  Similarity=0.003  Sum_probs=157.8

Q ss_pred             CCCeEEEecCCch--hHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGF--IASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+++||||+|+  ||++++++|+++|++|++++|+.      ..+....+...   ..++.++.+|++|.++++++++
T Consensus        25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~   95 (280)
T 3nrc_A           25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ------FKDRVEKLCAE---FNPAAVLPCDVISDQEIKDLFV   95 (280)
T ss_dssp             TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT------CHHHHHHHHGG---GCCSEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch------HHHHHHHHHHh---cCCceEEEeecCCHHHHHHHHH
Confidence            4589999999966  99999999999999999999975      11222222221   1358899999999998888875


Q ss_pred             -------CCCEEEEecccCCC----------CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCC
Q 023244           82 -------GCTGVLHVATPVDF----------EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        82 -------~~d~vih~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~  142 (285)
                             .+|+|||+||....          ...+.....+++|+.++.++++++.+.  ...++||++||..++...  
T Consensus        96 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~--  173 (280)
T 3nrc_A           96 ELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAM--  173 (280)
T ss_dssp             HHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCC--
T ss_pred             HHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCC--
Confidence                   36999999998653          122333578999999999999988754  114799999998765332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++...... .. ........
T Consensus       174 --------------------~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~-~~~~~~~~  231 (280)
T 3nrc_A          174 --------------------PSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS-NF-KKMLDYNA  231 (280)
T ss_dssp             --------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT-TH-HHHHHHHH
T ss_pred             --------------------CCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc-ch-HHHHHHHH
Confidence                                34467999999999999988877   4899999999999987543321 11 11111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      . ..+     ...+.+++|+|+++++++....  ..| .++++++
T Consensus       232 ~-~~p-----~~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdgG  270 (280)
T 3nrc_A          232 M-VSP-----LKKNVDIMEVGNTVAFLCSDMATGITGEVVHVDAG  270 (280)
T ss_dssp             H-HST-----TCSCCCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             h-cCC-----CCCCCCHHHHHHHHHHHhCcccCCcCCcEEEECCC
Confidence            1 111     2268899999999999997543  334 4666654

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.93  E-value=6.1e-25  Score=179.23  Aligned_cols=202  Identities=20%  Similarity=0.276  Sum_probs=144.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+++||||+|+||++++++|+++|++|++++|+.        +....+ .++   ..++.++.+|++|.++++++++   
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~   69 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ--------ERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLP   69 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSC
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHH
Confidence            5799999999999999999999999999999976        222222 122   1368899999999999999886   


Q ss_pred             ----CCCEEEEecccCC-C-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 ----GCTGVLHVATPVD-F-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ----~~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                          .+|+|||+||... .     ...+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.       
T Consensus        70 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-------  141 (248)
T 3asu_A           70 AEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPY-------  141 (248)
T ss_dssp             TTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCC-------
T ss_pred             HhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCC-------
Confidence                4799999999753 1     1122335889999999988888875    344 6899999998764322       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCcee-cCCCCCCCCccHHHHHHHHhcCcc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVV-GPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~-g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                     ++...|+.||.+.+.+.+.++.+.   |+++++++||.|. ++......... ......      
T Consensus       142 ---------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-~~~~~~------  199 (248)
T 3asu_A          142 ---------------AGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKAEK------  199 (248)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------
T ss_pred             ---------------CCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc-hHHHHH------
Confidence                           234679999999999999988774   7999999999999 56421110000 000000      


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .+   ....+++++|+|+++++++..+.
T Consensus       200 ~~---~~~~~~~p~dvA~~v~~l~s~~~  224 (248)
T 3asu_A          200 TY---QNTVALTPEDVSEAVWWVSTLPA  224 (248)
T ss_dssp             --------CCBCHHHHHHHHHHHHHSCT
T ss_pred             HH---hccCCCCHHHHHHHHHHHhcCCc
Confidence            00   01135799999999999998653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.93  E-value=5.5e-25  Score=179.90  Aligned_cols=187  Identities=14%  Similarity=0.064  Sum_probs=144.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      |+|+|+||||+|+||++++++|+++|++|++++|+..        .      .     .-..+.+|++|.++++++++. 
T Consensus        21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~--------~------~-----~~~~~~~d~~d~~~v~~~~~~~   81 (251)
T 3orf_A           21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN--------P------N-----ADHSFTIKDSGEEEIKSVIEKI   81 (251)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC--------T------T-----SSEEEECSCSSHHHHHHHHHHH
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc--------c------c-----cccceEEEeCCHHHHHHHHHHH
Confidence            5689999999999999999999999999999999871        1      1     113567899999988888763 


Q ss_pred             ------CCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccccc
Q 023244           83 ------CTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        83 ------~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            +|+|||+||....      ...+..+..+++|+.++.++++++.+.- .-++||++||..++.+.         
T Consensus        82 ~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~---------  152 (251)
T 3orf_A           82 NSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRT---------  152 (251)
T ss_dssp             HTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---------
T ss_pred             HHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCC---------
Confidence                  5999999997432      1112235788999999999999987652 13589999998765332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                   ++...|+.||.+.+.+++.++.+     .|+++++++||.|.++..            .... ...+
T Consensus       153 -------------~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~------------~~~~-~~~~  206 (251)
T 3orf_A          153 -------------SGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN------------RKYM-SDAN  206 (251)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH------------HHHC-TTSC
T ss_pred             -------------CCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch------------hhhc-cccc
Confidence                         34467999999999999999877     479999999999987631            1111 1111


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcC
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                           ...+++++|+|+++++++..
T Consensus       207 -----~~~~~~~~dva~~i~~l~~~  226 (251)
T 3orf_A          207 -----FDDWTPLSEVAEKLFEWSTN  226 (251)
T ss_dssp             -----GGGSBCHHHHHHHHHHHHHC
T ss_pred             -----ccccCCHHHHHHHHHHHhcC
Confidence                 23689999999999999987

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=6.8e-25  Score=177.74  Aligned_cols=187  Identities=15%  Similarity=0.154  Sum_probs=142.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+..        ..         .....++.+|++|.+++.++++   
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------~~---------~~~~~~~~~D~~~~~~~~~~~~~~~   65 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--------DQ---------ADSNILVDGNKNWTEQEQSILEQTA   65 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC--------TT---------SSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCcc--------cc---------ccccEEEeCCCCCHHHHHHHHHHHH
Confidence            589999999999999999999999999999999871        11         0135677899999998887765   


Q ss_pred             ------CCCEEEEecccCCCC---C---CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDFE---D---KEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~---~---~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||.....   .   .+..+..+++|+.++.++++++.+.- ..++||++||..++.+.        
T Consensus        66 ~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--------  137 (236)
T 1ooe_A           66 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT--------  137 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------
T ss_pred             HHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCC--------
Confidence                  689999999975421   1   12235789999999999999987641 13699999998765322        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                    ++...|+.||.+.+.+.+.++.++     |+++++++||.+.++...            ..... .
T Consensus       138 --------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~------------~~~~~-~  190 (236)
T 1ooe_A          138 --------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR------------KWMPN-A  190 (236)
T ss_dssp             --------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH------------HHSTT-C
T ss_pred             --------------CCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh------------hcCCC-c
Confidence                          334679999999999999998765     499999999999886310            01111 1


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLE  248 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~  248 (285)
                      .     ...+++++|+|+++++++.
T Consensus       191 ~-----~~~~~~~~dvA~~i~~~l~  210 (236)
T 1ooe_A          191 D-----HSSWTPLSFISEHLLKWTT  210 (236)
T ss_dssp             C-----GGGCBCHHHHHHHHHHHHH
T ss_pred             c-----ccccCCHHHHHHHHHHHHc
Confidence            1     1256889999999997774

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.93  E-value=2.1e-25  Score=185.38  Aligned_cols=216  Identities=20%  Similarity=0.172  Sum_probs=156.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +....+ .++   +.++.++.+|++|.++++++++ 
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~   97 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAA--------EKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEA   97 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--------HHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHH
Confidence            457899999999999999999999999999999976        332222 222   3478999999999999888876 


Q ss_pred             -----CCCEEEEe-cccCCCC----------CCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEecccee
Q 023244           82 -----GCTGVLHV-ATPVDFE----------DKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNAA  136 (285)
Q Consensus        82 -----~~d~vih~-a~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~  136 (285)
                           .+|++||+ |+.....          ..+.....+++|+.++.++++++...         +..++||++||..+
T Consensus        98 ~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~  177 (281)
T 3ppi_A           98 ANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG  177 (281)
T ss_dssp             HTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG
T ss_pred             HHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc
Confidence                 47999999 4442221          11123588999999999998887532         12469999999886


Q ss_pred             eeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHH
Q 023244          137 VFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRS  213 (285)
Q Consensus       137 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~  213 (285)
                      +...                      ++...|+.||.+.+.+.+.++.++   |+++++++||.|.++......    ..
T Consensus       178 ~~~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~----~~  231 (281)
T 3ppi_A          178 YEGQ----------------------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVG----EE  231 (281)
T ss_dssp             TSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTC----HH
T ss_pred             cCCC----------------------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhccc----HH
Confidence            5332                      234679999999999998888774   899999999999886422211    11


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSSH  261 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  261 (285)
                      ......... +.    ...+++++|+|+++++++.+....|. ++++++
T Consensus       232 ~~~~~~~~~-~~----~~~~~~pedvA~~v~~l~s~~~~tG~~i~vdGG  275 (281)
T 3ppi_A          232 ALAKFAANI-PF----PKRLGTPDEFADAAAFLLTNGYINGEVMRLDGA  275 (281)
T ss_dssp             HHHHHHHTC-CS----SSSCBCHHHHHHHHHHHHHCSSCCSCEEEESTT
T ss_pred             HHHHHHhcC-CC----CCCCCCHHHHHHHHHHHHcCCCcCCcEEEECCC
Confidence            111111111 11    13689999999999999987655564 566554

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.93  E-value=1.8e-25  Score=182.16  Aligned_cols=207  Identities=17%  Similarity=0.131  Sum_probs=134.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh---HH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FD   77 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~   77 (285)
                      |+.++|++|||||+|+||++++++|++ |+.|++++|+.        +....+.+.    .++.++.+|+++.+.   +.
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~--------~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~   67 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNP--------EHLAALAEI----EGVEPIESDIVKEVLEEGGV   67 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCH--------HHHHHHHTS----TTEEEEECCHHHHHHTSSSC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCH--------HHHHHHHhh----cCCcceecccchHHHHHHHH
Confidence            666789999999999999999999987 89999999976        444444332    368899999988743   22


Q ss_pred             HHhc---CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           78 AAIA---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        78 ~~~~---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +.++   .+|+|||+||.....     ..+..+..+++|+.++.++++++.    +.+  +++|++||..++...     
T Consensus        68 ~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~-----  140 (245)
T 3e9n_A           68 DKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPH-----  140 (245)
T ss_dssp             GGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC-------------
T ss_pred             HHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCC-----
Confidence            2222   589999999986542     112235788999999888777764    333  699999998876433     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+++.++.+   .|+++++++||.+.++........         .+..
T Consensus       141 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~  194 (245)
T 3e9n_A          141 -----------------PGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS---------QGTN  194 (245)
T ss_dssp             -------------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh---------hhcc
Confidence                             33467999999999999999876   489999999999998753221100         0000


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYIC  258 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  258 (285)
                      .     ....+++++|+|+++++++..+..+.++++
T Consensus       195 ~-----~~~~~~~p~dvA~~i~~l~~~~~~~~~~~i  225 (245)
T 3e9n_A          195 F-----RPEIYIEPKEIANAIRFVIDAGETTQITNV  225 (245)
T ss_dssp             ------CCGGGSCHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred             c-----ccccCCCHHHHHHHHHHHHcCCCccceeee
Confidence            0     123589999999999999998876666654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.93  E-value=8.9e-25  Score=180.53  Aligned_cols=204  Identities=20%  Similarity=0.279  Sum_probs=143.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      |++|||||+|+||++++++|+++|++|++++|+.        +....+ .++... .++.++.+|++|.++++++++.  
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~--------~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~   92 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRRE--------ERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLP   92 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCC
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHH
Confidence            7899999999999999999999999999999976        222222 122111 4788999999999999998875  


Q ss_pred             -----CCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCcc-EEEEeccceeeeccCCCCcc
Q 023244           83 -----CTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVK-RVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        83 -----~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~-~~v~~SS~~~~~~~~~~~~~  146 (285)
                           +|+|||+||....      ...+.++..+++|+.++.++.+++.    +.+ .+ +||++||..++...      
T Consensus        93 ~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~------  165 (272)
T 2nwq_A           93 EEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPY------  165 (272)
T ss_dssp             GGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCC------
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCC------
Confidence                 4999999997542      1122335789999999877766653    445 56 99999998764322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      ++...|+.||.+.+.+.+.++.+.   |+++++++||.+.++............. ..      
T Consensus       166 ----------------~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~-~~------  222 (272)
T 2nwq_A          166 ----------------PGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARY-DK------  222 (272)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------
T ss_pred             ----------------CCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHH-HH------
Confidence                            234679999999999999988663   7999999999999875321100000000 00      


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .+.   ...++.++|+|+++++++..+.
T Consensus       223 ~~~---~~~~~~pedvA~~v~~l~s~~~  247 (272)
T 2nwq_A          223 TYA---GAHPIQPEDIAETIFWIMNQPA  247 (272)
T ss_dssp             ------CCCCBCHHHHHHHHHHHHTSCT
T ss_pred             hhc---cCCCCCHHHHHHHHHHHhCCCc
Confidence            000   1135899999999999998653

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.93  E-value=2.6e-25  Score=182.49  Aligned_cols=226  Identities=13%  Similarity=0.065  Sum_probs=145.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      ||+|+||||+|+||++++++|+++|++|++++|+..        ....            .+.+|++|.++++++++.  
T Consensus         1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------~~~~------------~~~~Dl~~~~~v~~~~~~~~   60 (257)
T 1fjh_A            1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA--------EVIA------------DLSTAEGRKQAIADVLAKCS   60 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS--------SEEC------------CTTSHHHHHHHHHHHHTTCT
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch--------hhcc------------ccccCCCCHHHHHHHHHHhC
Confidence            468999999999999999999999999999999871        1100            156899999999998865  


Q ss_pred             --CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC---cccccCCCC
Q 023244           83 --CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV---DMMDETFWS  153 (285)
Q Consensus        83 --~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~---~~~~e~~~~  153 (285)
                        +|+|||+||..... .. .+..+++|+.++.++++++.+    .+ .++||++||..++.......   ....+.++.
T Consensus        61 ~~id~lv~~Ag~~~~~-~~-~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           61 KGMDGLVLCAGLGPQT-KV-LGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             TCCSEEEECCCCCTTC-SS-HHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             CCCCEEEECCCCCCCc-cc-HHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchh
Confidence              49999999976521 23 469999999999999888763    34 68999999998653211000   000000000


Q ss_pred             chhh-hh--hcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC-ccccc
Q 023244          154 DVDY-IR--KLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN-REEYG  226 (285)
Q Consensus       154 ~~~~-~~--~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~~  226 (285)
                      .... ..  ...++...|+.||.+.+.+++.++.+   .|+++++++||.+.++..........   ....... ..+  
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~~~~~~~~--  212 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR---YGESIAKFVPP--  212 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCS--
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchh---HHHHHHhcccc--
Confidence            0000 00  01123467999999999999888776   58999999999999875332101000   0000000 111  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                         ...+++++|+|+++++++..+.  ..|. +++.++
T Consensus       213 ---~~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG  247 (257)
T 1fjh_A          213 ---MGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             ---TTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             ---cCCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence               1258999999999999997652  3354 556654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.93  E-value=1.8e-24  Score=179.67  Aligned_cols=223  Identities=18%  Similarity=0.173  Sum_probs=157.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |...+|++|||||+|+||++++++|+++|++|++++|+.        +....+...  .+.++.++.+|++|.+++.+++
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~   70 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSA--------ERLRELEVA--HGGNAVGVVGDVRSLQDQKRAA   70 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH--TBTTEEEEECCTTCHHHHHHHH
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH--------HHHHHHHHH--cCCcEEEEEcCCCCHHHHHHHH
Confidence            666789999999999999999999999999999999976        333332221  1347899999999999888777


Q ss_pred             c-------CCCEEEEecccCCCC-------CC---ChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccC
Q 023244           81 A-------GCTGVLHVATPVDFE-------DK---EPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-------~~---~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~  141 (285)
                      +       .+|++||+||.....       .+   +.++..+++|+.++.++++++.+.-  ..+++|++||..++... 
T Consensus        71 ~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-  149 (281)
T 3zv4_A           71 ERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPN-  149 (281)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSS-
T ss_pred             HHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCC-
Confidence            5       479999999975431       11   1235788999999999998875431  12699999998765332 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHHH------
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVRS------  213 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~~------  213 (285)
                                           ++...|+.||.+.+.+.+.++.++  ++++++++||.+.++............      
T Consensus       150 ---------------------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~  208 (281)
T 3zv4_A          150 ---------------------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVP  208 (281)
T ss_dssp             ---------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CC
T ss_pred             ---------------------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchh
Confidence                                 234679999999999999998875  399999999999987532211100000      


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC---CCc-eEEEecc
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD---AKG-RYICSSH  261 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~-~~~~~~~  261 (285)
                      ...... ...+     ...+..++|+|.++++++..+.   ..| .+++.++
T Consensus       209 ~~~~~~-~~~p-----~~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG  254 (281)
T 3zv4_A          209 LADMLK-SVLP-----IGRMPALEEYTGAYVFFATRGDSLPATGALLNYDGG  254 (281)
T ss_dssp             HHHHHH-HTCT-----TSSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSS
T ss_pred             HHHHHH-hcCC-----CCCCCCHHHHHHHHHHhhcccccccccCcEEEECCC
Confidence            011111 1112     2368999999999999998333   245 4566554

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.93  E-value=1.2e-24  Score=176.15  Aligned_cols=199  Identities=20%  Similarity=0.203  Sum_probs=149.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCC-CCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|++|||||+|+||++++++|+++|++|++++|+.        +..... .++. ..+.++.++.+|++|.+++.++++ 
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   73 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSV--------DRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKK   73 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHH
Confidence            67999999999999999999999999999999976        222211 1111 113478999999999999998876 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                            .+|+|||+||.....     ..+..+..+++|+.++.++++++.+.   + .+++|++||.......       
T Consensus        74 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~~~-------  145 (235)
T 3l77_A           74 VLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSARLI-------  145 (235)
T ss_dssp             HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSCC-------
T ss_pred             HHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcccC-------
Confidence                  579999999986541     22333588999999999999887542   2 3678888887654322       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                     +....|+.||.+.+.+.+.+..+. ++++++++||.+.++.......            .     
T Consensus       146 ---------------~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~------------~-----  193 (235)
T 3l77_A          146 ---------------PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG------------K-----  193 (235)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC------------C-----
T ss_pred             ---------------CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC------------c-----
Confidence                           234579999999999999886554 8999999999998875322111            0     


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                       .....++.++|+|+++++++..+..
T Consensus       194 -~~~~~~~~p~dva~~v~~l~~~~~~  218 (235)
T 3l77_A          194 -PKEKGYLKPDEIAEAVRCLLKLPKD  218 (235)
T ss_dssp             -CGGGTCBCHHHHHHHHHHHHTSCTT
T ss_pred             -ccccCCCCHHHHHHHHHHHHcCCCC
Confidence             0011578999999999999987754

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=99.93  E-value=1e-24  Score=179.48  Aligned_cols=210  Identities=16%  Similarity=0.162  Sum_probs=148.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +.... ..++...+.++.++.+|++|.+++.++++ 
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   77 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR--------EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   77 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        22221 11111123478899999999998887775 


Q ss_pred             ------CCCEEEEecccC-CC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPV-DF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~-~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|+|||+||.. ..     ...+.++..+++|+.++.++++++.+    .+ .++||++||..++.+.     
T Consensus        78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-----  151 (262)
T 1zem_A           78 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP-----  151 (262)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC-----
T ss_pred             HHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCC-----
Confidence                  589999999975 21     11223358899999999998888754    34 5799999998765332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC------------CCcc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK------------FAGS  210 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~------------~~~~  210 (285)
                                       ++...|+.||.+.+.+.+.++.++   |+++++++||.+.++.....            ....
T Consensus       152 -----------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~  214 (262)
T 1zem_A          152 -----------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTD  214 (262)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSS
T ss_pred             -----------------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccC
Confidence                             234579999999999888887663   89999999999987632110            0000


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .......... ..+     ...+..++|+|+++++++...
T Consensus       215 ~~~~~~~~~~-~~p-----~~r~~~p~dvA~~v~~l~s~~  248 (262)
T 1zem_A          215 PKVVAQQMIG-SVP-----MRRYGDINEIPGVVAFLLGDD  248 (262)
T ss_dssp             HHHHHHHHHH-TST-----TSSCBCGGGSHHHHHHHHSGG
T ss_pred             HHHHHHHHHh-cCC-----CCCCcCHHHHHHHHHHHcCch
Confidence            0001111111 111     125789999999999999753

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.93  E-value=9.2e-25  Score=179.00  Aligned_cols=222  Identities=14%  Similarity=0.117  Sum_probs=157.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      ++|+++||||+|+||++++++|+++|++|+++.++..      .+......++.....++.++.+|++|.++++++++. 
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   79 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK------EEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSL   79 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCS------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCch------HHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHH
Confidence            4689999999999999999999999999998755431      111122222222245788999999999888777642 


Q ss_pred             ------------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCC
Q 023244           83 ------------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        83 ------------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                                  +|+|||+||.....     ..+..+..+++|+.++.++++++.+. ...+++|++||..++.+.    
T Consensus        80 ~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~----  155 (255)
T 3icc_A           80 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISL----  155 (255)
T ss_dssp             HHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCC----
T ss_pred             HHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCC----
Confidence                        89999999975431     22233578999999999999998765 114689999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.++   |+++++++||.+.++..........  ...... .
T Consensus       156 ------------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~-~  214 (255)
T 3icc_A          156 ------------------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPM--MKQYAT-T  214 (255)
T ss_dssp             ------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHH--HHHHHH-H
T ss_pred             ------------------CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHH--HHHhhh-c
Confidence                              234679999999999999988774   8999999999999886443322211  111111 1


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+     ...+.+++|+|+++.+++....  ..| .++++++
T Consensus       215 ~~~-----~~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdgG  252 (255)
T 3icc_A          215 ISA-----FNRLGEVEDIADTAAFLASPDSRWVTGQLIDVSGG  252 (255)
T ss_dssp             TST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             cCC-----cCCCCCHHHHHHHHHHHhCcccCCccCCEEEecCC
Confidence            112     2368899999999999996432  234 4566654

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=1.8e-24  Score=175.74  Aligned_cols=200  Identities=14%  Similarity=0.076  Sum_probs=148.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+..        ..         .....++.+|++|.++++++++  
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~--------~~---------~~~~~~~~~D~~~~~~v~~~~~~~   68 (241)
T 1dhr_A            6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN--------EE---------ASASVIVKMTDSFTEQADQVTAEV   68 (241)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC--------TT---------SSEEEECCCCSCHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh--------hc---------cCCcEEEEcCCCCHHHHHHHHHHH
Confidence            4679999999999999999999999999999999871        11         0135677899999998888775  


Q ss_pred             -------CCCEEEEecccCCCC---C---CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccc
Q 023244           82 -------GCTGVLHVATPVDFE---D---KEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~---~---~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                             .+|+|||+||.....   .   .+..+..+++|+.++.++++++.+.- ..++||++||..++.+.       
T Consensus        69 ~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-------  141 (241)
T 1dhr_A           69 GKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT-------  141 (241)
T ss_dssp             HHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-------
T ss_pred             HHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCC-------
Confidence                   589999999975421   1   12235788999999999999987641 13699999998765332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                     ++...|+.||.+.+.+.+.++.++     |+++++++||.+.++..            ...... 
T Consensus       142 ---------------~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~------------~~~~~~-  193 (241)
T 1dhr_A          142 ---------------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN------------RKSMPE-  193 (241)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH------------HHHSTT-
T ss_pred             ---------------CCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc------------cccCcc-
Confidence                           234679999999999999988764     59999999999987621            001011 


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEec
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSS  260 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~  260 (285)
                      ..     ...+++++|+|+.+++++.....  .| .+.+.+
T Consensus       194 ~~-----~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v~g  229 (241)
T 1dhr_A          194 AD-----FSSWTPLEFLVETFHDWITGNKRPNSGSLIQVVT  229 (241)
T ss_dssp             SC-----GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEEEE
T ss_pred             hh-----hccCCCHHHHHHHHHHHhcCCCcCccceEEEEeC
Confidence            11     12568899999999999975432  34 344443

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.92  E-value=4.2e-25  Score=183.43  Aligned_cols=211  Identities=17%  Similarity=0.142  Sum_probs=148.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +..... .++.. ....+.++.+|++|.++++++++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRP--------DVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence            468999999999999999999999999999999986        222211 11111 12246889999999998888775


Q ss_pred             -------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc----C-CccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|+|||+||....      ...+.++..+++|+.++.++.+++.+.    + ..++||++||..++...   
T Consensus       104 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~---  180 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPR---  180 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCC---
T ss_pred             HHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCC---
Confidence                   46999999997532      122333578999999988887776432    2 13699999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         ++...|+.||.+.+.+.+.++.+   .|+++++++||.|.++.........          
T Consensus       181 -------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------  231 (281)
T 4dry_A          181 -------------------PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV----------  231 (281)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE----------
T ss_pred             -------------------CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh----------
Confidence                               34567999999999999998877   4899999999999887432211000          


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCCCce
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR  255 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  255 (285)
                       ...........++.++|+|+++++++..+....+
T Consensus       232 -~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          232 -LQANGEVAAEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             -ECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             -hhhhhcccccCCCCHHHHHHHHHHHhCCCccCcc
Confidence             0000001122578999999999999998766544

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.92  E-value=1.3e-24  Score=177.95  Aligned_cols=218  Identities=11%  Similarity=0.045  Sum_probs=144.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH-H---h
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-A---I   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~---~   80 (285)
                      ||++|||||+|+||++++++|+++|++|++++|+.        +....+.++...+.++..+  |..+.+.+.+ +   +
T Consensus         1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~l~~~~~~~~~~--d~~~v~~~~~~~~~~~   70 (254)
T 1zmt_A            1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESF--------KQKDELEAFAETYPQLKPM--SEQEPAELIEAVTSAY   70 (254)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG--------GSHHHHHHHHHHCTTSEEC--CCCSHHHHHHHHHHHH
T ss_pred             CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHhcCCcEEEE--CHHHHHHHHHHHHHHh
Confidence            36899999999999999999999999999999986        2222221110011234333  4444332222 1   2


Q ss_pred             cCCCEEEEecccC-CC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           81 AGCTGVLHVATPV-DF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        81 ~~~d~vih~a~~~-~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                      ..+|+|||+||.. ..     ...+..+..+++|+.++.++++++.    +.+ .++||++||..++...          
T Consensus        71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~----------  139 (254)
T 1zmt_A           71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW----------  139 (254)
T ss_dssp             SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC----------
T ss_pred             CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCC----------
Confidence            2689999999976 32     1122335889999999999888874    344 5799999998765332          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccH----HHHHHHHhcCcc
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSV----RSSLALILGNRE  223 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~----~~~~~~~~~~~~  223 (285)
                                  ++...|+.||.+.+.+.+.++.++   |+++++++||.++||.........+    ......... ..
T Consensus       140 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~-~~  206 (254)
T 1zmt_A          140 ------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKK-VT  206 (254)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHH-HS
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhc-cC
Confidence                        234679999999999999988774   8999999999998876433211111    001111100 01


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~-~~~~~~~  261 (285)
                      +     ...+.+++|+|+++++++.....  .| .+++.++
T Consensus       207 p-----~~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG  242 (254)
T 1zmt_A          207 A-----LQRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  242 (254)
T ss_dssp             S-----SSSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             C-----CCCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence            1     12578999999999999976542  34 4566655

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.92  E-value=1.4e-24  Score=184.08  Aligned_cols=216  Identities=15%  Similarity=0.039  Sum_probs=154.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEe-cCCCCccccCccchhhh-hcCC-CCCCCEEEEecCCCChh------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPD------   74 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~~------   74 (285)
                      .+|++|||||+|+||++++++|+++|++|++++ |+.        +....+ .++. ..+.++.++.+|++|.+      
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~  116 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA--------AEANALSATLNARRPNSAITVQADLSNVATAPVSG  116 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC---
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCH--------HHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccc
Confidence            457899999999999999999999999999999 765        222211 1111 11247899999999998      


Q ss_pred             -----------hHHHHhc-------CCCEEEEecccCCCC-----C--------------CChHHHHHHHHHHHHHHHHH
Q 023244           75 -----------GFDAAIA-------GCTGVLHVATPVDFE-----D--------------KEPEEVITQRAINGTLGILK  117 (285)
Q Consensus        75 -----------~~~~~~~-------~~d~vih~a~~~~~~-----~--------------~~~~~~~~~~n~~~~~~l~~  117 (285)
                                 +++++++       .+|+|||+||.....     .              .+.++..+++|+.++.++++
T Consensus       117 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  196 (328)
T 2qhx_A          117 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  196 (328)
T ss_dssp             ----CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence                       8888776       589999999975431     1              22234789999999999988


Q ss_pred             HHHhc---CC------ccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--
Q 023244          118 SCLKS---GT------VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--  186 (285)
Q Consensus       118 ~~~~~---~~------~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--  186 (285)
                      ++.+.   ..      .++||++||..++...                      ++...|+.||.+.+.+.+.++.++  
T Consensus       197 ~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~----------------------~~~~~Y~asKaal~~l~~~la~el~~  254 (328)
T 2qhx_A          197 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------LGYTIYTMAKGALEGLTRSAALELAP  254 (328)
T ss_dssp             HHHHHHHHSCGGGSCSCEEEEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHhcCCcCCCCCcEEEEECchhhccCC----------------------CCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence            87542   11      4799999998764322                      234679999999999999988775  


Q ss_pred             -CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCc-ceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          187 -GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       187 -~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                       |+++++++||.|.++. .. .    .......... .+     .. .+..++|+|+++++++....  ..| .+++.++
T Consensus       255 ~gIrvn~v~PG~v~T~~-~~-~----~~~~~~~~~~-~p-----~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  322 (328)
T 2qhx_A          255 LQIRVNGVGPGLSVLVD-DM-P----PAVWEGHRSK-VP-----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  322 (328)
T ss_dssp             GTEEEEEEEESSBSCCC-CS-C----HHHHHHHHTT-CT-----TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCcEEEEEecCcccCCc-cc-c----HHHHHHHHhh-CC-----CCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCC
Confidence             8999999999999886 21 1    1111111111 11     11 47899999999999996432  235 4566654

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.92  E-value=1.1e-24  Score=178.20  Aligned_cols=209  Identities=20%  Similarity=0.177  Sum_probs=152.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCC--CChhhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADL--SHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl--~d~~~~~~~   79 (285)
                      ++|+++||||+|+||++++++|+++|++|++++|+.        +...... ++.. ...++.++.+|+  +|.++++++
T Consensus        11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   82 (252)
T 3f1l_A           11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNE--------EKLRQVASHINEETGRQPQWFILDLLTCTSENCQQL   82 (252)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHH
Confidence            458999999999999999999999999999999986        2222211 1111 123678899999  889888877


Q ss_pred             hc-------CCCEEEEecccCCC----C--CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCC
Q 023244           80 IA-------GCTGVLHVATPVDF----E--DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~----~--~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      ++       .+|+|||+||....    .  ..+.++..+++|+.++.++++++.    +.+ .++||++||..++.+.  
T Consensus        83 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~--  159 (252)
T 3f1l_A           83 AQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGR--  159 (252)
T ss_dssp             HHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCC--
T ss_pred             HHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCC--
Confidence            75       58999999997432    1  112235789999999999998873    444 6899999998765332  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC--CcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                          ++...|+.||.+.+.+.+.++.+++  ++++++.||.+.++..            .....
T Consensus       160 --------------------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~------------~~~~~  207 (252)
T 3f1l_A          160 --------------------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMR------------ASAFP  207 (252)
T ss_dssp             --------------------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHH------------HHHCT
T ss_pred             --------------------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchh------------hhhCC
Confidence                                2346799999999999999998864  9999999999977521            11111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..      ....+.+++|+|.++++++....  ..| .+++.++
T Consensus       208 ~~------~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdgG  245 (252)
T 3f1l_A          208 TE------DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQPG  245 (252)
T ss_dssp             TC------CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSCC
T ss_pred             cc------chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCCC
Confidence            11      11257889999999999997643  234 4566554

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.92  E-value=1.7e-24  Score=179.15  Aligned_cols=218  Identities=16%  Similarity=0.187  Sum_probs=152.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|+++||||+|+||++++++|+++|++|++++|+.....................+.++.++.+|++|.+++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            55668999999999999999999999999999999998621000000011111111111347889999999999888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|++||+||.....     ..+.++..+++|+.++.++.+++.+    .+ .+++|++||...+....   
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~---  157 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAW---  157 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHH---
T ss_pred             HHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCC---
Confidence            5       589999999975431     1223358899999999999888754    33 57999999987653310   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCc-eecCCCCCCCCccHHHHHHHHhc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSM-VVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~-v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                       .++...|+.||.+.+.+.+.++.++   |+++++++||. +-.+.. .           ....
T Consensus       158 -----------------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~-~-----------~~~~  208 (274)
T 3e03_A          158 -----------------WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI-N-----------MLPG  208 (274)
T ss_dssp             -----------------HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------------------C
T ss_pred             -----------------CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh-h-----------hccc
Confidence                             0123569999999999999988774   79999999995 544421 0           0011


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--CceEEE
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGRYIC  258 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~~~~  258 (285)
                      .  .     ...+..++|+|+++++++.....  .|.+..
T Consensus       209 ~--~-----~~~~~~pedvA~~v~~l~s~~~~~itG~~i~  241 (274)
T 3e03_A          209 V--D-----AAACRRPEIMADAAHAVLTREAAGFHGQFLI  241 (274)
T ss_dssp             C--C-----GGGSBCTHHHHHHHHHHHTSCCTTCCSCEEE
T ss_pred             c--c-----ccccCCHHHHHHHHHHHhCccccccCCeEEE
Confidence            1  1     12478999999999999976543  455443

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.92  E-value=1.6e-24  Score=180.65  Aligned_cols=218  Identities=15%  Similarity=0.102  Sum_probs=153.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC-CCccccCccchhhhhcCCCCCCCEEEEecCCCC----hhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE-LDPEHRNSKDLSFLKNLPGASERLRIFHADLSH----PDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~   78 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+. .    ...+....+..  ..+.++.++.+|++|    .+++++
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~----~~~~~~~~l~~--~~~~~~~~~~~Dv~~~~~~~~~v~~   95 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAE----AAVSLADELNK--ERSNTAVVCQADLTNSNVLPASCEE   95 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHH----HHHHHHHHHHH--HSTTCEEEEECCCSCSTTHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchH----HHHHHHHHHHh--hcCCceEEEEeecCCccCCHHHHHH
Confidence            468999999999999999999999999999999975 1    00011111210  112478899999999    888877


Q ss_pred             Hhc-------CCCEEEEecccCCCC-------CC--------ChHHHHHHHHHHHHHHHHHHHHhcC---C------ccE
Q 023244           79 AIA-------GCTGVLHVATPVDFE-------DK--------EPEEVITQRAINGTLGILKSCLKSG---T------VKR  127 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-------~~--------~~~~~~~~~n~~~~~~l~~~~~~~~---~------~~~  127 (285)
                      +++       .+|+|||+||.....       .+        +..+..+++|+.++.++++++.+.-   .      .++
T Consensus        96 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~  175 (288)
T 2x9g_A           96 IINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLS  175 (288)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEE
T ss_pred             HHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeE
Confidence            765       589999999975431       11        1234778999999999998876542   1      358


Q ss_pred             EEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCC
Q 023244          128 VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFIC  204 (285)
Q Consensus       128 ~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~  204 (285)
                      ||++||..++...                      ++...|+.||.+.+.+.+.++.++   |+++++++||.++++. .
T Consensus       176 iv~isS~~~~~~~----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~  232 (288)
T 2x9g_A          176 IVNLCDAMVDQPC----------------------MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A  232 (288)
T ss_dssp             EEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T
T ss_pred             EEEEecccccCCC----------------------CCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c
Confidence            9999998764322                      234679999999999998888774   8999999999999986 2


Q ss_pred             CCCCccHHHHHHHHhcCccccccccCcce-eeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          205 PKFAGSVRSSLALILGNREEYGFLLNTSM-VHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       ..    .......... .+.     ..+ .+++|+|+++++++....  ..|. +++.++
T Consensus       233 -~~----~~~~~~~~~~-~p~-----~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  282 (288)
T 2x9g_A          233 -MG----EEEKDKWRRK-VPL-----GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGG  282 (288)
T ss_dssp             -SC----HHHHHHHHHT-CTT-----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cC----hHHHHHHHhh-CCC-----CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcc
Confidence             11    1111111111 111     145 899999999999997532  2454 456554

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.92  E-value=5e-24  Score=175.83  Aligned_cols=222  Identities=14%  Similarity=0.094  Sum_probs=158.4

Q ss_pred             CCCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC-CCCCEEEEecCCCChhhHHHH
Q 023244            3 EGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         3 ~~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .++|+++||||+  |+||++++++|+++|++|++++|+..     . .......++.. .+.++.++.+|++|.++++++
T Consensus        18 l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~-----~-~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (267)
T 3gdg_A           18 LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRA-----Q-GAEENVKELEKTYGIKAKAYKCQVDSYESCEKL   91 (267)
T ss_dssp             CTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSS-----S-HHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHH
T ss_pred             cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcc-----h-hHHHHHHHHHHhcCCceeEEecCCCCHHHHHHH
Confidence            356899999999  99999999999999999999998761     1 10111211110 134789999999999988887


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .+++|++||...+....  
T Consensus        92 ~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~--  168 (267)
T 3gdg_A           92 VKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANF--  168 (267)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCS--
T ss_pred             HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCC--
Confidence            76       469999999976541     12233588999999999998887    4445 57999999987643321  


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcC--CcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHG--LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~--i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .++...|+.||.+.+.+.+.++.+++  ++++.+.||.+.++..... .   ....... ..
T Consensus       169 ------------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~-~---~~~~~~~-~~  225 (267)
T 3gdg_A          169 ------------------PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV-P---KETQQLW-HS  225 (267)
T ss_dssp             ------------------SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS-C---HHHHHHH-HT
T ss_pred             ------------------CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC-C---HHHHHHH-Hh
Confidence                              12346799999999999999998864  8999999999988753221 1   1111111 12


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      ..+.     ..+.+++|+|+++++++....  ..| .++++++
T Consensus       226 ~~~~-----~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdgG  263 (267)
T 3gdg_A          226 MIPM-----GRDGLAKELKGAYVYFASDASTYTTGADLLIDGG  263 (267)
T ss_dssp             TSTT-----SSCEETHHHHHHHHHHHSTTCTTCCSCEEEESTT
T ss_pred             cCCC-----CCCcCHHHHHhHhheeecCccccccCCEEEECCc
Confidence            2222     378999999999999997543  235 4566554

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.92  E-value=8.7e-24  Score=180.07  Aligned_cols=218  Identities=15%  Similarity=0.180  Sum_probs=153.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+................++...+.++.++.+|++|.++++++++  
T Consensus        44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~  123 (346)
T 3kvo_A           44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKA  123 (346)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence            458999999999999999999999999999999987210000000011111111224578899999999998888876  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|+|||+||.....     ..+.++..+++|+.++.++++++..    .+ .++||++||...+....      
T Consensus       124 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~~------  196 (346)
T 3kvo_A          124 IKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVW------  196 (346)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGGG------
T ss_pred             HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCCC------
Confidence                 689999999975531     1223358899999999999998843    34 67999999987653310      


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCc-eecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSM-VVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~-v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                    .++...|+.||.+.+.+.+.++.++  |++++++.||. +..+.        .    ... ....+
T Consensus       197 --------------~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~--------~----~~~-~~~~~  249 (346)
T 3kvo_A          197 --------------FKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAA--------M----DML-GGPGI  249 (346)
T ss_dssp             --------------TSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHH--------H----HHH-CC--C
T ss_pred             --------------CCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHH--------H----Hhh-ccccc
Confidence                          1234679999999999999998885  79999999996 43321        1    111 11112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC-CCceEEEec
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD-AKGRYICSS  260 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~~~~~~  260 (285)
                      .     ..+..++|+|+++++++.... ..|.+.+.+
T Consensus       250 ~-----~r~~~pedvA~~v~~L~s~~~~itG~~ivdg  281 (346)
T 3kvo_A          250 E-----SQCRKVDIIADAAYSIFQKPKSFTGNFVIDE  281 (346)
T ss_dssp             G-----GGCBCTHHHHHHHHHHHTSCTTCCSCEEEHH
T ss_pred             c-----ccCCCHHHHHHHHHHHHhcCCCCCceEEECC
Confidence            2     257899999999999998722 245554443

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=99.92  E-value=1.1e-24  Score=176.69  Aligned_cols=220  Identities=11%  Similarity=0.038  Sum_probs=157.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||++.||+.+++.|+++|++|++.+|+.        +.. +..+++...+.++..+.+|++|+++++++++ 
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~--------~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~   79 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRA--------TLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSK   79 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCH--------HHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999976        222 2222222234578899999999998888775 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||....     ...+.++..+++|+.++..+.+++.    +++.-.++|++||..+..+.      
T Consensus        80 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~------  153 (255)
T 4g81_D           80 LDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAAR------  153 (255)
T ss_dssp             HHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBC------
T ss_pred             HHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCC------
Confidence                  37999999997554     1223346899999999888877653    33225799999998865333      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.||.....+.+.++.++   ||+++.|.||.|.+|........  ........ ...
T Consensus       154 ----------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~--~~~~~~~~-~~~  214 (255)
T 4g81_D          154 ----------------PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIED--KQFDSWVK-SST  214 (255)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTC--HHHHHHHH-HHS
T ss_pred             ----------------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCC--HHHHHHHH-hCC
Confidence                            334679999999999888888774   89999999999988742211110  01111111 112


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ++.     .+..++|+|.++++++....  ..|. +.+.|+
T Consensus       215 Pl~-----R~g~pediA~~v~fL~S~~a~~iTG~~i~VDGG  250 (255)
T 4g81_D          215 PSQ-----RWGRPEELIGTAIFLSSKASDYINGQIIYVDGG  250 (255)
T ss_dssp             TTC-----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCcCHHHHHHHHHHHhCchhCCCcCCEEEECCC
Confidence            222     68899999999999996543  2454 456555

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=99.92  E-value=6.6e-24  Score=173.74  Aligned_cols=219  Identities=19%  Similarity=0.141  Sum_probs=155.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||++.||+.+++.|+++|++|++.+|+.        +... ..+++   +.++..+.+|++|.++++++++ 
T Consensus        28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~--------~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~   96 (273)
T 4fgs_A           28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRK--------DVLDAAIAEI---GGGAVGIQADSANLAELDRLYEK   96 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999986        3322 22333   3477889999999998888875 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|++||+||....     ...+.++..+++|+.++..+.+++.+. .+-+++|++||.....+.         
T Consensus        97 ~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~---------  167 (273)
T 4fgs_A           97 VKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT---------  167 (273)
T ss_dssp             HHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC---------
T ss_pred             HHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC---------
Confidence                  36999999997543     122334689999999999999988654 123689999998764333         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccH---HHHHHHHhcCcc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSV---RSSLALILGNRE  223 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~---~~~~~~~~~~~~  223 (285)
                                   +....|+.||.....+.+.++.++   ||+++.|.||.+.+|..........   ..+...+. ...
T Consensus       168 -------------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~~~  233 (273)
T 4fgs_A          168 -------------PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALA-AQV  233 (273)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHH-HHS
T ss_pred             -------------CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHH-hcC
Confidence                         234679999999999999998885   7999999999998875433211111   11111111 112


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      ++.     .+..++|+|.++++++.....  .|. +.+.|+
T Consensus       234 Plg-----R~g~peeiA~~v~FLaSd~a~~iTG~~i~VDGG  269 (273)
T 4fgs_A          234 PMG-----RVGRAEEVAAAALFLASDDSSFVTGAELFVDGG  269 (273)
T ss_dssp             TTS-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCcCHHHHHHHHHHHhCchhcCccCCeEeECcC
Confidence            232     688999999999999965432  454 445544

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.92  E-value=7.1e-24  Score=179.65  Aligned_cols=222  Identities=17%  Similarity=0.166  Sum_probs=151.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhc---CCCCCCCEEEEecCCCChhhHHHHh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKN---LPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +|+|+||||+|+||++++++|+++|++|++++|+..     ..+.. ..+..   ......++.++.+|++|.+++.+++
T Consensus         2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~   76 (327)
T 1jtv_A            2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLR-----DLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAAR   76 (327)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEES-----CGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecC-----cHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHH
Confidence            578999999999999999999999999999888651     11111 11111   1112347899999999999999998


Q ss_pred             cC-----CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           81 AG-----CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        81 ~~-----~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                      +.     +|+|||+||.....     ..+..+..+++|+.++.++++++    ++.+ .++||++||..++...      
T Consensus        77 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~------  149 (327)
T 1jtv_A           77 ERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL------  149 (327)
T ss_dssp             HTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC------
T ss_pred             HHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCC------
Confidence            75     89999999975431     12233588999999999999885    4445 6899999998765332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccH----------H-
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSV----------R-  212 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~----------~-  212 (285)
                                      +....|+.||.+.+.+.+.++.+   .|+++++++||.|.++..........          . 
T Consensus       150 ----------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  213 (327)
T 1jtv_A          150 ----------------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFH  213 (327)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHH
T ss_pred             ----------------CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHH
Confidence                            23457999999999999998876   58999999999999875332111100          0 


Q ss_pred             HHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEE
Q 023244          213 SSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYIC  258 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~  258 (285)
                      .+..........+.    +-...++|+|+.+++++..+.....|..
T Consensus       214 ~~~~~~~~~~~~~~----~~~~~pedvA~~i~~l~~~~~~~~~~~t  255 (327)
T 1jtv_A          214 RFYQYLAHSKQVFR----EAAQNPEEVAEVFLTALRAPKPTLRYFT  255 (327)
T ss_dssp             HHHHHHHHHHHHHH----HHCBCHHHHHHHHHHHHHCSSCCSEEES
T ss_pred             HHHHHHHHHHHhhh----hcCCCHHHHHHHHHHHHcCCCCCeEEEe
Confidence            00000000000000    1126899999999999987654445543

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=99.92  E-value=4.5e-24  Score=171.59  Aligned_cols=219  Identities=16%  Similarity=0.135  Sum_probs=158.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|+++||||++.||+.+++.|+++|.+|++.+|+..      ++....+.+.   +.++..+.+|++|+++++++++  
T Consensus         8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~------~~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~~g   78 (247)
T 4hp8_A            8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP------DETLDIIAKD---GGNASALLIDFADPLAAKDSFTDA   78 (247)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC------HHHHHHHHHT---TCCEEEEECCTTSTTTTTTSSTTT
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH------HHHHHHHHHh---CCcEEEEEccCCCHHHHHHHHHhC
Confidence            5799999999999999999999999999999999761      1222333332   4578999999999998888776  


Q ss_pred             CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcccccCCC
Q 023244           82 GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFW  152 (285)
Q Consensus        82 ~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~  152 (285)
                      .+|++||+||....     ...+.++..+++|+.++..+.+++.    ++++-.++|++||.....+.            
T Consensus        79 ~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~------------  146 (247)
T 4hp8_A           79 GFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG------------  146 (247)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC------------
T ss_pred             CCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC------------
Confidence            38999999997554     1222345899999999988887643    34435799999998765333            


Q ss_pred             CchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccccc
Q 023244          153 SDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLL  229 (285)
Q Consensus       153 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
                                +....|+.||.....+.+.++.++   ||+++.|.||.|.+|........  ......+. ...++.   
T Consensus       147 ----------~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~--~~~~~~~~-~~~Plg---  210 (247)
T 4hp8_A          147 ----------IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRAD--AARNKAIL-ERIPAG---  210 (247)
T ss_dssp             ----------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTS--HHHHHHHH-TTCTTS---
T ss_pred             ----------CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccC--HHHHHHHH-hCCCCC---
Confidence                      234579999999999988888774   89999999999988742211000  01111111 222333   


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                        .+..++|+|.++++++.....  .|. +.+.|+
T Consensus       211 --R~g~peeiA~~v~fLaSd~a~~iTG~~i~VDGG  243 (247)
T 4hp8_A          211 --RWGHSEDIAGAAVFLSSAAADYVHGAILNVDGG  243 (247)
T ss_dssp             --SCBCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             --CCcCHHHHHHHHHHHhCchhcCCcCCeEEECcc
Confidence              688999999999999965432  454 445554

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.91  E-value=1.8e-23  Score=174.49  Aligned_cols=216  Identities=15%  Similarity=0.055  Sum_probs=154.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEe-cCCCCccccCccchhhh-hcCC-CCCCCEEEEecCCCChh------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFL-KNLP-GASERLRIFHADLSHPD------   74 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~Dl~d~~------   74 (285)
                      .+|++|||||+|+||++++++|+++|++|++++ |+.        +....+ .++. ..+.++.++.+|++|.+      
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA--------AEANALSATLNARRPNSAITVQADLSNVATAPVSG   79 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH--------HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC-
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCH--------HHHHHHHHHHhhhcCCeeEEEEeecCCcccccccc
Confidence            468999999999999999999999999999999 865        222111 1111 11247899999999998      


Q ss_pred             -----------hHHHHhc-------CCCEEEEecccCCCC-----C--------------CChHHHHHHHHHHHHHHHHH
Q 023244           75 -----------GFDAAIA-------GCTGVLHVATPVDFE-----D--------------KEPEEVITQRAINGTLGILK  117 (285)
Q Consensus        75 -----------~~~~~~~-------~~d~vih~a~~~~~~-----~--------------~~~~~~~~~~n~~~~~~l~~  117 (285)
                                 ++.++++       .+|+|||+||.....     .              .+..+..+++|+.++.++++
T Consensus        80 ~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  159 (291)
T 1e7w_A           80 ADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIK  159 (291)
T ss_dssp             ---CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHH
Confidence                       8888776       589999999975431     1              22235789999999999988


Q ss_pred             HHHhc---CC------ccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--
Q 023244          118 SCLKS---GT------VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--  186 (285)
Q Consensus       118 ~~~~~---~~------~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--  186 (285)
                      ++.+.   ..      .++||++||..++.+.                      ++...|+.||.+.+.+.+.++.++  
T Consensus       160 ~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~----------------------~~~~~Y~asKaa~~~l~~~la~e~~~  217 (291)
T 1e7w_A          160 AFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------LGYTIYTMAKGALEGLTRSAALELAP  217 (291)
T ss_dssp             HHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             HHHHHHHhcCCCCCCCCcEEEEEechhhcCCC----------------------CCCchhHHHHHHHHHHHHHHHHHHHh
Confidence            87642   11      3799999998764322                      234679999999999999888774  


Q ss_pred             -CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCc-ceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          187 -GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       187 -~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       |+++++++||.+.++. .  ..   .......... .+     .. .+..++|+|+++++++....  ..|. +++.++
T Consensus       218 ~gI~vn~v~PG~v~T~~-~--~~---~~~~~~~~~~-~p-----~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG  285 (291)
T 1e7w_A          218 LQIRVNGVGPGLSVLVD-D--MP---PAVWEGHRSK-VP-----LYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  285 (291)
T ss_dssp             GTEEEEEEEESSBCCGG-G--SC---HHHHHHHHTT-CT-----TTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCeEEEEEeeCCccCCc-c--CC---HHHHHHHHhh-CC-----CCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCC
Confidence             8999999999998875 2  21   1111211111 11     11 47899999999999997432  2454 456554

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.91  E-value=5.3e-24  Score=177.38  Aligned_cols=199  Identities=14%  Similarity=0.062  Sum_probs=146.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|+||||+|+||++++++|+++|++|++++|+.        +....+. ++.. ...++.++.+|++|.++++++++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~   98 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK--------ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   98 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence            468999999999999999999999999999999976        2222211 1100 11368899999999998888775


Q ss_pred             -------CCCEEEEe-cccCCCC----CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCcc
Q 023244           82 -------GCTGVLHV-ATPVDFE----DKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -------~~d~vih~-a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                             .+|+|||+ |+.....    ..+..+..+++|+.++.++++++.+.   + .++||++||..++...      
T Consensus        99 ~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~~------  171 (286)
T 1xu9_A           99 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKVAY------  171 (286)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTSCC------
T ss_pred             HHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCcccccCC------
Confidence                   68999999 5654321    11223578999999999998887543   2 3699999998754322      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                      ++...|+.||.+.+.+++.++.+.     ++++++++||.+.++...           .. .. 
T Consensus       172 ----------------~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~-----------~~-~~-  222 (286)
T 1xu9_A          172 ----------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM-----------KA-VS-  222 (286)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHH-----------HH-SC-
T ss_pred             ----------------CCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHH-----------Hh-cc-
Confidence                            234679999999999998887664     899999999999876310           00 00 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .     .....+++++|+|+.++.++..+.
T Consensus       223 ~-----~~~~~~~~~~~vA~~i~~~~~~~~  247 (286)
T 1xu9_A          223 G-----IVHMQAAPKEECALEIIKGGALRQ  247 (286)
T ss_dssp             G-----GGGGGCBCHHHHHHHHHHHHHTTC
T ss_pred             c-----cccCCCCCHHHHHHHHHHHHhcCC
Confidence            0     011257899999999999998654

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.91  E-value=4.9e-24  Score=175.18  Aligned_cols=211  Identities=17%  Similarity=0.177  Sum_probs=141.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||+|+||++++++|+++|++|++++|+.        +....+ .++...+.++.++.+|++|.++++++++ 
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHL--------DTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ   75 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        222111 1111112468899999999988877664 


Q ss_pred             -------CCCEEEEecc--cC-------C-C--CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeee
Q 023244           82 -------GCTGVLHVAT--PV-------D-F--EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVF  138 (285)
Q Consensus        82 -------~~d~vih~a~--~~-------~-~--~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~  138 (285)
                             .+|+|||+||  ..       . .  ...+.++..+++|+.++.++.+++.    +.+ .++||++||..++.
T Consensus        76 ~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~  154 (260)
T 2qq5_A           76 VDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ  154 (260)
T ss_dssp             HHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS
T ss_pred             HHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC
Confidence                   3699999994  32       1 1  1223335788889888877666553    445 68999999987542


Q ss_pred             ccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHH
Q 023244          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSL  215 (285)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~  215 (285)
                      .                       .+...|+.||.+.+.+.+.++.+   .|+++++++||.+.++..............
T Consensus       155 ~-----------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~  211 (260)
T 2qq5_A          155 Y-----------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQD  211 (260)
T ss_dssp             C-----------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------------
T ss_pred             C-----------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccch
Confidence            1                       12356999999999999988876   489999999999998753221100000000


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      ........++     ..+..++|+|+++++++..+.
T Consensus       212 ~~~~~~~~~~-----~~~~~pe~va~~v~~l~s~~~  242 (260)
T 2qq5_A          212 PVLKQFKSAF-----SSAETTELSGKCVVALATDPN  242 (260)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHTCTT
T ss_pred             hHHHHHHhhh-----ccCCCHHHHHHHHHHHhcCcc
Confidence            0000000011     135689999999999997654

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=99.91  E-value=5.7e-23  Score=167.89  Aligned_cols=217  Identities=17%  Similarity=0.127  Sum_probs=150.8

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +.++|++|||||++.||+++++.|+++|++|++.+|+.+       +      ..    ....++.+|++|.++++++++
T Consensus         8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~-------~------~~----~~~~~~~~Dv~~~~~v~~~~~   70 (261)
T 4h15_A            8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARP-------E------GL----PEELFVEADLTTKEGCAIVAE   70 (261)
T ss_dssp             CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC-------T------TS----CTTTEEECCTTSHHHHHHHHH
T ss_pred             CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCch-------h------CC----CcEEEEEcCCCCHHHHHHHHH
Confidence            346799999999999999999999999999999999761       0      01    123367899999998888765


Q ss_pred             -------CCCEEEEecccCCC-------CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                             .+|++||+||....       ...+.++..+++|+.++..+.+++    ++++ -.++|++||.....+.+  
T Consensus        71 ~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~--  147 (261)
T 4h15_A           71 ATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLP--  147 (261)
T ss_dssp             HHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCT--
T ss_pred             HHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCC--
Confidence                   47999999986432       112233588999999988877765    4445 57999999987543321  


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC-------CccHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF-------AGSVRS  213 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~-------~~~~~~  213 (285)
                                         .....|+.||...+.+.+.++.++   ||++++|.||.|.+|......       ......
T Consensus       148 -------------------~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~  208 (261)
T 4h15_A          148 -------------------ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEG  208 (261)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHH
T ss_pred             -------------------CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhh
Confidence                               123579999999999998888774   899999999999876311100       000000


Q ss_pred             HHHH--HhcCccccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEeccc
Q 023244          214 SLAL--ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSHT  262 (285)
Q Consensus       214 ~~~~--~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~~  262 (285)
                      ....  ......++     ..+..++|+|.++++++.....  .|. +.+.|+.
T Consensus       209 ~~~~~~~~~~~~Pl-----gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          209 GKKIIMDGLGGIPL-----GRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHHHHTTCCTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHhcCCCC-----CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence            0000  01111222     2689999999999999964432  454 5566653

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=99.91  E-value=7.5e-23  Score=167.51  Aligned_cols=224  Identities=15%  Similarity=0.090  Sum_probs=156.3

Q ss_pred             CCCCCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCcc-chhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            1 MEEGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         1 M~~~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |+..+|+++||||+|  .||..+++.|+++|++|++.+|+.     ...+ ....+.+.  ...++.++.+|++|++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~-----~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~   74 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE-----RSRKELEKLLEQL--NQPEAHLYQIDVQSDEEVI   74 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG-----GGHHHHHHHHGGG--TCSSCEEEECCTTCHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH-----HHHHHHHHHHHhc--CCCcEEEEEccCCCHHHHH
Confidence            455789999999887  899999999999999999999986     1111 11222222  2347889999999999888


Q ss_pred             HHhc-------CCCEEEEecccCCC-------CC--CChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeecc
Q 023244           78 AAIA-------GCTGVLHVATPVDF-------ED--KEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~-------~~--~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~  140 (285)
                      ++++       .+|++||+||....       .+  .+.+...+++|+.+...+.+++... .+-.++|++||.....+.
T Consensus        75 ~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~  154 (256)
T 4fs3_A           75 NGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAV  154 (256)
T ss_dssp             HHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCC
T ss_pred             HHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCc
Confidence            7775       47999999997432       11  1122356788998888888877654 224699999998764332


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            +....|+.||...+.+.+.++.++   ||++++|.||.+.+|...... . .......
T Consensus       155 ----------------------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~-~-~~~~~~~  210 (256)
T 4fs3_A          155 ----------------------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG-G-FNTILKE  210 (256)
T ss_dssp             ----------------------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT-T-HHHHHHH
T ss_pred             ----------------------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc-C-CHHHHHH
Confidence                                  334679999999999998888774   899999999999887543321 1 1111111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ... ..++.     .+..++|+|.++++++....  ..|. +.+.|+
T Consensus       211 ~~~-~~Pl~-----R~g~peevA~~v~fL~Sd~a~~iTG~~i~VDGG  251 (256)
T 4fs3_A          211 IKE-RAPLK-----RNVDQVEVGKTAAYLLSDLSSGVTGENIHVDSG  251 (256)
T ss_dssp             HHH-HSTTS-----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHh-cCCCC-----CCcCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence            111 12222     68899999999999996543  2454 445554

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.91  E-value=1.4e-23  Score=171.12  Aligned_cols=200  Identities=19%  Similarity=0.152  Sum_probs=144.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC--CChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--SHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~   81 (285)
                      .+|+++||||+|+||++++++|+++|++|++++|+..    ...+....+....  ..+..++.+|+  +|.+++.++++
T Consensus        13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~----~~~~~~~~~~~~~--~~~~~~~~~d~d~~~~~~~~~~~~   86 (247)
T 3i1j_A           13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEA----SLAEVSDQIKSAG--QPQPLIIALNLENATAQQYRELAA   86 (247)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTT--SCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHH----HHHHHHHHHHhcC--CCCceEEEeccccCCHHHHHHHHH
Confidence            4689999999999999999999999999999999861    0011112222221  23566777776  88888777765


Q ss_pred             -------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                             .+|+|||+||....      ...+..+..+++|+.++.++++++.    +.+ .+++|++||...+.+.    
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~----  161 (247)
T 3i1j_A           87 RVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGR----  161 (247)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCC----
T ss_pred             HHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCC----
Confidence                   58999999997532      1123345889999999999999874    334 6799999998764332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                        ++...|+.||.+.+.+.+.++.++    ++++++++||.+.++..            .....
T Consensus       162 ------------------~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~------------~~~~~  211 (247)
T 3i1j_A          162 ------------------ANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMR------------AQAYP  211 (247)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHH------------HHHST
T ss_pred             ------------------CCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccc------------hhccc
Confidence                              334679999999999999988773    69999999999977521            11111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ...      ...+..++|+|+++++++...
T Consensus       212 ~~~------~~~~~~p~dva~~~~~l~s~~  235 (247)
T 3i1j_A          212 DEN------PLNNPAPEDIMPVYLYLMGPD  235 (247)
T ss_dssp             TSC------GGGSCCGGGGTHHHHHHHSGG
T ss_pred             ccC------ccCCCCHHHHHHHHHHHhCch
Confidence            111      124678999999999999643

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.90  E-value=1.1e-22  Score=180.66  Aligned_cols=226  Identities=18%  Similarity=0.161  Sum_probs=159.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++||||||+|+||.+++++|+++|++ |++++|+.     ...... ....++...+.++.++.+|++|.+++.++++
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~-----~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~  299 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSG-----PDADGAGELVAELEALGARTTVAACDVTDRESVRELLG  299 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSG-----GGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCC-----CCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHH
Confidence            4689999999999999999999999985 89999976     111111 1111121123478999999999999999987


Q ss_pred             CC------CEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 GC------TGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 ~~------d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                      .+      |+|||+||.....     ..+.....+++|+.++.++.+++++.+ .++||++||..++.+.          
T Consensus       300 ~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~g~----------  368 (486)
T 2fr1_A          300 GIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA----------  368 (486)
T ss_dssp             TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC----------
T ss_pred             HHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcCCC----------
Confidence            64      9999999986541     122335778899999999999998877 8999999998765443          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                                  +....|+.+|...+.+...+. ..|+++++++||.+.++++....   .   ...       +. ...
T Consensus       369 ------------~g~~~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~~~---~---~~~-------~~-~~g  421 (486)
T 2fr1_A          369 ------------PGLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEGP---V---ADR-------FR-RHG  421 (486)
T ss_dssp             ------------TTCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC-------------------------CT-TTT
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccchh---H---HHH-------HH-hcC
Confidence                        223569999999999887765 56999999999999886532110   0   000       00 112


Q ss_pred             cceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhC
Q 023244          231 TSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  276 (285)
                      ..+++++|++.++..++..+...  +.+.  .+.|..+...+....
T Consensus       422 ~~~i~~e~~a~~l~~~l~~~~~~--~~v~--~~d~~~~~~~~~~~~  463 (486)
T 2fr1_A          422 VIEMPPETACRALQNALDRAEVC--PIVI--DVRWDRFLLAYTAQR  463 (486)
T ss_dssp             EECBCHHHHHHHHHHHHHTTCSS--CEEC--EECHHHHHHHHTSSS
T ss_pred             CCCCCHHHHHHHHHHHHhCCCCe--EEEE--eCCHHHHhhhhcccC
Confidence            36799999999999999865432  2222  256777776655443

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.90  E-value=1.7e-23  Score=171.84  Aligned_cols=210  Identities=17%  Similarity=0.118  Sum_probs=147.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH---cCCeEEEEecCCCCccccCccchhhh-hcCCC--CCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSELDPEHRNSKDLSFL-KNLPG--ASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .+|+++||||+|+||++++++|++   +|++|++++|+.        +....+ .++..  .+.++.++.+|++|.++++
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~   76 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE--------SMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH--------HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCH--------HHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHH
Confidence            368899999999999999999999   899999999976        222211 11100  1246889999999999887


Q ss_pred             HHhc---------CCC--EEEEecccCCC--------CCCChHHHHHHHHHHHHHHHHHHHHhcC-----CccEEEEecc
Q 023244           78 AAIA---------GCT--GVLHVATPVDF--------EDKEPEEVITQRAINGTLGILKSCLKSG-----TVKRVVYTSS  133 (285)
Q Consensus        78 ~~~~---------~~d--~vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~SS  133 (285)
                      ++++         .+|  +|||+||....        ...+.++..+++|+.++.++++++.+.-     ..++||++||
T Consensus        77 ~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS  156 (259)
T 1oaa_A           77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcC
Confidence            7764         258  99999997532        1123345889999999999999986531     2468999999


Q ss_pred             ceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCc-cH
Q 023244          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAG-SV  211 (285)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~-~~  211 (285)
                      ..++.+.                      ++...|+.||.+.+.+.+.++.++ ++++++++||.+.++........ ..
T Consensus       157 ~~~~~~~----------------------~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~  214 (259)
T 1oaa_A          157 LCALQPY----------------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKD  214 (259)
T ss_dssp             GGGTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSC
T ss_pred             chhcCCC----------------------CCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCC
Confidence            8765322                      334679999999999999999886 49999999999876531100000 00


Q ss_pred             HHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          212 RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      ........ ...+     ...+.+++|+|+.+++++..
T Consensus       215 ~~~~~~~~-~~~p-----~~~~~~p~dvA~~v~~l~~~  246 (259)
T 1oaa_A          215 PELRSKLQ-KLKS-----DGALVDCGTSAQKLLGLLQK  246 (259)
T ss_dssp             HHHHHHHH-HHHH-----TTCSBCHHHHHHHHHHHHHH
T ss_pred             hhHHHHHH-Hhhh-----cCCcCCHHHHHHHHHHHHhh
Confidence            00000000 0011     22589999999999999974

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.90  E-value=1e-22  Score=179.27  Aligned_cols=215  Identities=14%  Similarity=0.054  Sum_probs=152.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||+|+||.+++++|+++|++|++++|+.     ...+......+.     ++.++.+|++|.++++++++  
T Consensus       212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~-----~~~~l~~~~~~~-----~~~~~~~Dvtd~~~v~~~~~~~  281 (454)
T 3u0b_A          212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDG-----AAEDLKRVADKV-----GGTALTLDVTADDAVDKITAHV  281 (454)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGG-----GHHHHHHHHHHH-----TCEEEECCTTSTTHHHHHHHHH
T ss_pred             CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCc-----cHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHH
Confidence            468999999999999999999999999999999865     111111222222     45788999999998888775  


Q ss_pred             -----C-CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeccceeeeccCCCCcc
Q 023244           82 -----G-CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS----GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 -----~-~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                           . +|+|||+||.....     ..+.++..+++|+.++.++.+++...    + ..+||++||...+.+.      
T Consensus       282 ~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~------  354 (454)
T 3u0b_A          282 TEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGN------  354 (454)
T ss_dssp             HHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCC------
T ss_pred             HHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCC------
Confidence                 3 89999999986541     22334588999999999999998765    3 6799999998865443      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.+|...+.+.+.++.+   .|+++++++||.+.++..... ........   .. . 
T Consensus       355 ----------------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~---~~-~-  412 (454)
T 3u0b_A          355 ----------------RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVG---RR-L-  412 (454)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHH---HH-S-
T ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHH---Hh-h-
Confidence                            33467999999888888887765   489999999999988753221 10000000   00 0 


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                          .....+..++|+|+++.+++....  ..| .+++.++
T Consensus       413 ----~~l~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdGG  449 (454)
T 3u0b_A          413 ----NSLFQGGQPVDVAELIAYFASPASNAVTGNTIRVCGQ  449 (454)
T ss_dssp             ----BTTSSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESSS
T ss_pred             ----ccccCCCCHHHHHHHHHHHhCCccCCCCCcEEEECCc
Confidence                112256789999999999997543  234 4556554

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.90  E-value=2.3e-22  Score=169.34  Aligned_cols=220  Identities=17%  Similarity=0.184  Sum_probs=149.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhcCCC-CCCCEEEEecCCCCh-hhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPG-ASERLRIFHADLSHP-DGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~Dl~d~-~~~~~~~   80 (285)
                      ++|+||||||+|+||++++++|+++|++|++++|+.        +.. ....++.. ...++.++.+|++|. +.+.+++
T Consensus        11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~   82 (311)
T 3o26_A           11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV--------TKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLA   82 (311)
T ss_dssp             -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHH
T ss_pred             CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHH
Confidence            467899999999999999999999999999999986        221 11222211 234799999999998 7776665


Q ss_pred             c-------CCCEEEEecccCCCC-----------------------------------CCChHHHHHHHHHHHHHHHHHH
Q 023244           81 A-------GCTGVLHVATPVDFE-----------------------------------DKEPEEVITQRAINGTLGILKS  118 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----------------------------------~~~~~~~~~~~n~~~~~~l~~~  118 (285)
                      +       .+|+|||+||.....                                   ..+..+..+++|+.++.+++++
T Consensus        83 ~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  162 (311)
T 3o26_A           83 DFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEV  162 (311)
T ss_dssp             HHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             HHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHH
Confidence            4       689999999986320                                   1122346799999998888888


Q ss_pred             HHh----cCCccEEEEeccceeeeccCCCCc----ccccCCCCchh-----------------hhhhcCCCCchhHhhHH
Q 023244          119 CLK----SGTVKRVVYTSSNAAVFYNDKDVD----MMDETFWSDVD-----------------YIRKLDSWGKSYAISKT  173 (285)
Q Consensus       119 ~~~----~~~~~~~v~~SS~~~~~~~~~~~~----~~~e~~~~~~~-----------------~~~~~~~~~~~Y~~sK~  173 (285)
                      +..    .+ .++||++||..++........    ..+++.+....                 ......++...|+.||.
T Consensus       163 ~~~~l~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~  241 (311)
T 3o26_A          163 LIPLLQLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA  241 (311)
T ss_dssp             HHHHHTTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHH
T ss_pred             hhHhhccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHH
Confidence            753    33 579999999876543211000    00000000000                 00001134467999999


Q ss_pred             HHHHHHHHHHHHc-CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC
Q 023244          174 LTERAALEFAEEH-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       174 ~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                      +.+.+.+.+++++ ++++++++||.|.++.....                         .....++.++.+++++..+..
T Consensus       242 a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~~-------------------------~~~~~~~~a~~~~~~~~~~~~  296 (311)
T 3o26_A          242 CLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYGI-------------------------GNYTAEEGAEHVVRIALFPDD  296 (311)
T ss_dssp             HHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTTC-------------------------CSBCHHHHHHHHHHHHTCCSS
T ss_pred             HHHHHHHHHHhhcCCceEEEecCCceecCCcCCC-------------------------CCCCHHHHHHHHHHHHhCCCC
Confidence            9999999999886 69999999999988642110                         235788999999998876542


Q ss_pred             --CceEE
Q 023244          253 --KGRYI  257 (285)
Q Consensus       253 --~~~~~  257 (285)
                        .+.|.
T Consensus       297 ~~~g~~~  303 (311)
T 3o26_A          297 GPSGFFY  303 (311)
T ss_dssp             CCCSCEE
T ss_pred             CCCceEe
Confidence              34443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.89  E-value=1.5e-21  Score=174.10  Aligned_cols=226  Identities=18%  Similarity=0.153  Sum_probs=162.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccc-hhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKD-LSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++||||||+|+||.+++++|+++|+ +|++++|+.+     .... .....++...+.++.++.+|++|.+++.++++
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~-----~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~  332 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGP-----EAPGAAELAEELRGHGCEVVHAACDVAERDALAALVT  332 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGG-----GSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCc-----ccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHh
Confidence            468999999999999999999999998 5888898761     1111 11112222234578999999999999999997


Q ss_pred             C--CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           82 G--CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        82 ~--~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      +  +|+|||+||.....     ..+..+..+++|+.++.++.+++... + .++||++||..++.+.             
T Consensus       333 ~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~g~-------------  398 (511)
T 2z5l_A          333 AYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTWGN-------------  398 (511)
T ss_dssp             HSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTTCC-------------
T ss_pred             cCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcCCC-------------
Confidence            6  99999999986541     12233578899999999999998776 5 7899999998765443             


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcce
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM  233 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (285)
                               +....|+.+|...|.+.+.+. ..|+++++++||.+.+.++...   ...   ..+.        .....+
T Consensus       399 ---------~g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~---~~~---~~~~--------~~g~~~  454 (511)
T 2z5l_A          399 ---------AGQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG---AGE---ESLS--------RRGLRA  454 (511)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC---HHH---HHHH--------HHTBCC
T ss_pred             ---------CCCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc---ccH---HHHH--------hcCCCC
Confidence                     234579999999999988764 5699999999999844332221   111   1111        011257


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhC
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  276 (285)
                      ++++|+++++..++..+..  .+.+.  .+.|..+...+....
T Consensus       455 l~~e~~a~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~  493 (511)
T 2z5l_A          455 MDPDAAVDALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR  493 (511)
T ss_dssp             BCHHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred             CCHHHHHHHHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence            9999999999999986543  22332  355777776665543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.89  E-value=2.3e-22  Score=163.68  Aligned_cols=214  Identities=13%  Similarity=0.109  Sum_probs=141.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEE-e--cCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHH-H
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTT-V--RSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA-A   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~-~   79 (285)
                      +|+++||||+|+||++++++|+++|++|+++ +  |+.        +....+ .++    .+..+.  |..+.+.+.+ +
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~--------~~~~~~~~~~----~~~~~~--~~~~v~~~~~~~   66 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADA--------AERQRFESEN----PGTIAL--AEQKPERLVDAT   66 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH--------HHHHHHHHHS----TTEEEC--CCCCGGGHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCH--------HHHHHHHHHh----CCCccc--CHHHHHHHHHHH
Confidence            4789999999999999999999999999999 6  876        222222 222    122222  4444443322 2


Q ss_pred             hc---CCCEEEEecccCCC---C-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           80 IA---GCTGVLHVATPVDF---E-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        80 ~~---~~d~vih~a~~~~~---~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      .+   .+|+|||+||....   .     ..+..+..+++|+.++.++++++.    +.+ .++||++||..++...    
T Consensus        67 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~----  141 (244)
T 1zmo_A           67 LQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPL----  141 (244)
T ss_dssp             GGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCC----
T ss_pred             HHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCC----
Confidence            22   57999999997543   1     112235789999999999888775    344 6899999998765332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccH-HHHHHHHhc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSV-RSSLALILG  220 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~-~~~~~~~~~  220 (285)
                                        ++...|+.||.+.+.+.+.++.+.   |+++++++||.+.++..... .... .........
T Consensus       142 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~  202 (244)
T 1zmo_A          142 ------------------AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPT-SDWENNPELRERVD  202 (244)
T ss_dssp             ------------------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCH-HHHHHCHHHHHHHH
T ss_pred             ------------------CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-ccccchHHHHHHHh
Confidence                              234569999999999999888774   89999999999988752000 0000 000111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      ...+.     ..+..++|+|+++++++.....  .|. +.+.++
T Consensus       203 ~~~p~-----~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdgG  241 (244)
T 1zmo_A          203 RDVPL-----GRLGRPDEMGALITFLASRRAAPIVGQFFAFTGG  241 (244)
T ss_dssp             HHCTT-----CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred             cCCCC-----CCCcCHHHHHHHHHHHcCccccCccCCEEEeCCC
Confidence            01111     2578999999999999976432  354 455554

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.89  E-value=9.2e-22  Score=162.37  Aligned_cols=220  Identities=12%  Similarity=0.011  Sum_probs=152.7

Q ss_pred             CCCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccc-hhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKD-LSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+++||||  +|+||++++++|+++|++|++++|+.        +. ...+.+.  ...++.++.+|++|.+++++++
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~   75 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR--------LRLIQRITDR--LPAKAPLLELDVQNEEHLASLA   75 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC--------HHHHHHHHTT--SSSCCCEEECCTTCHHHHHHHH
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh--------HHHHHHHHHh--cCCCceEEEccCCCHHHHHHHH
Confidence            4588999999  99999999999999999999999976        22 1222221  1236788999999999888887


Q ss_pred             c----------CCCEEEEecccCC-----C-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeec
Q 023244           81 A----------GCTGVLHVATPVD-----F-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFY  139 (285)
Q Consensus        81 ~----------~~d~vih~a~~~~-----~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~  139 (285)
                      +          .+|+|||+||...     .     ...+.++..+++|+.++.++++++.+.- .-++||++||.... .
T Consensus        76 ~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~-~  154 (269)
T 2h7i_A           76 GRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSR-A  154 (269)
T ss_dssp             HHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSS-C
T ss_pred             HHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCcccc-c
Confidence            6          7899999999754     1     1122235789999999999999997641 12699999987541 1


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----CCccHH
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----FAGSVR  212 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----~~~~~~  212 (285)
                      .                      +....|+.||.+.+.+.+.++.++   |+++++++||.+.++.....    ......
T Consensus       155 ~----------------------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~  212 (269)
T 2h7i_A          155 M----------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAG  212 (269)
T ss_dssp             C----------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHH
T ss_pred             c----------------------CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHH
Confidence            1                      234679999999999999888774   89999999999987631110    000000


Q ss_pred             ----HHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          213 ----SSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       213 ----~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                          ........ ..+.    .+.+..++|+|+++++++....  ..|. +.+.++
T Consensus       213 ~~~~~~~~~~~~-~~p~----~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG  263 (269)
T 2h7i_A          213 AQIQLLEEGWDQ-RAPI----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  263 (269)
T ss_dssp             HHHHHHHHHHHH-HCTT----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             HHHHHHHHhhhc-cCCc----ccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence                00011100 0111    1147889999999999997543  2454 455554

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.88  E-value=6.1e-22  Score=167.05  Aligned_cols=201  Identities=14%  Similarity=0.105  Sum_probs=138.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCc-cccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDP-EHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||+|+||++++++|+++|++|+++++..... ...+.+.... ..++......   ..+|+++.+++.++++
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~---~~~D~~~~~~~~~~~~   84 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGK---AVANYDSVEAGEKLVK   84 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCE---EEEECCCGGGHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCe---EEEeCCCHHHHHHHHH
Confidence            468999999999999999999999999999987642100 0001121111 1111111111   3479999887766653


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||.....+.     
T Consensus        85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~-----  158 (319)
T 1gz6_A           85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN-----  158 (319)
T ss_dssp             HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCC-----
Confidence                   589999999976531     12234588999999988888876    3445 6899999998654332     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       ++...|+.||.+.+.+.+.++.+.   |+++++++||.+ ++......+   .          
T Consensus       159 -----------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~---~----------  207 (319)
T 1gz6_A          159 -----------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP---E----------  207 (319)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC---H----------
T ss_pred             -----------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC---h----------
Confidence                             234579999999999999988774   899999999987 432111000   0          


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                            ....+++++|+|..+++++..+
T Consensus       208 ------~~~~~~~p~dvA~~~~~l~s~~  229 (319)
T 1gz6_A          208 ------DLVEALKPEYVAPLVLWLCHES  229 (319)
T ss_dssp             ------HHHHHSCGGGTHHHHHHHTSTT
T ss_pred             ------hhhccCCHHHHHHHHHHHhCch
Confidence                  0113578899999999999764

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.88  E-value=6.3e-21  Score=159.64  Aligned_cols=231  Identities=12%  Similarity=0.033  Sum_probs=145.4

Q ss_pred             CCCCCCeEEEecCC--chhHHHHHHHHHHcCCeEEEEecCCCCcc---ccCccchhhhhcCCCCC--CCEEEEecC----
Q 023244            1 MEEGKGRVCVTGGT--GFIASWLIMRLLDHGYSVTTTVRSELDPE---HRNSKDLSFLKNLPGAS--ERLRIFHAD----   69 (285)
Q Consensus         1 M~~~~k~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~D----   69 (285)
                      |..++|+++||||+  |+||++++++|+++|++|++++|++....   ..+.+....+.++....  .....+..|    
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceecc
Confidence            33456899999999  99999999999999999999986420000   00001111112221100  112333333    


Q ss_pred             ----CC----C--------hhhHHHHhc-------CCCEEEEecccCC----C---CCCChHHHHHHHHHHHHHHHHHHH
Q 023244           70 ----LS----H--------PDGFDAAIA-------GCTGVLHVATPVD----F---EDKEPEEVITQRAINGTLGILKSC  119 (285)
Q Consensus        70 ----l~----d--------~~~~~~~~~-------~~d~vih~a~~~~----~---~~~~~~~~~~~~n~~~~~~l~~~~  119 (285)
                          +.    |        .++++++++       .+|+|||+||...    .   ...+.++..+++|+.++.++++++
T Consensus        84 ~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~  163 (297)
T 1d7o_A           84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             chhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHH
Confidence                32    2        445555543       5799999998642    1   112223588999999999999999


Q ss_pred             Hhc-CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC-chhHhhHHHHHHHHHHHHHH----cCCcEEEe
Q 023244          120 LKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG-KSYAISKTLTERAALEFAEE----HGLDLVTL  193 (285)
Q Consensus       120 ~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~  193 (285)
                      .+. ..-+++|++||...+.+.                      +.. ..|+.||.+.+.+.+.++.+    .|++++++
T Consensus       164 ~~~m~~~g~iv~isS~~~~~~~----------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v  221 (297)
T 1d7o_A          164 LPIMNPGGASISLTYIASERII----------------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTI  221 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCC----------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred             HHHhccCceEEEEeccccccCC----------------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEE
Confidence            765 112699999998754322                      122 36999999999998888765    58999999


Q ss_pred             ccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCc-eEEEecc
Q 023244          194 IPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKG-RYICSSH  261 (285)
Q Consensus       194 Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~-~~~~~~~  261 (285)
                      +||.+.+|.....  ............. .++     ..+.+++|+|+++++++....  ..| .+++.++
T Consensus       222 ~PG~v~T~~~~~~--~~~~~~~~~~~~~-~p~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG  284 (297)
T 1d7o_A          222 SAGPLGSRAAKAI--GFIDTMIEYSYNN-API-----QKTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             EECCCBCCCSSCC--SHHHHHHHHHHHH-SSS-----CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             eccccccchhhhc--cccHHHHHHhhcc-CCC-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence            9999999864331  1111111111111 122     257899999999999997432  234 4566655

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.86  E-value=3.9e-21  Score=170.19  Aligned_cols=206  Identities=19%  Similarity=0.169  Sum_probs=151.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++++|||||+|+||.+++++|+++|+ .|++++|+.     ...+.. ....++...+.++.++.+|++|.+++.++++.
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~-----~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~  313 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRG-----ADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAE  313 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSG-----GGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCC-----CChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence            48999999999999999999999998 788888864     111111 11222222345899999999999999999864


Q ss_pred             ------CCEEEEecccC-CC---C--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           83 ------CTGVLHVATPV-DF---E--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        83 ------~d~vih~a~~~-~~---~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                            +|+|||+||.. ..   .  ..+..+..+++|+.++.++.+++.+.. .++||++||.....+.          
T Consensus       314 i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~g~----------  382 (496)
T 3mje_A          314 LPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVWGS----------  382 (496)
T ss_dssp             CCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTTC----------
T ss_pred             HHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcCCC----------
Confidence                  69999999986 32   1  122335889999999999999998887 8899999998876443          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                                  +....|+.+|...+.+.+++. ..|+++++|.||.+.++++..... ..    ..+...        .
T Consensus       383 ------------~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~-~~----~~l~~~--------g  436 (496)
T 3mje_A          383 ------------GGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPE-VH----DRLVRQ--------G  436 (496)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-------C----HHHHHT--------T
T ss_pred             ------------CCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChH-HH----HHHHhc--------C
Confidence                        334679999999999988765 579999999999998776433210 00    111111        1


Q ss_pred             cceeeHHHHHHHHHHhhcCCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                      ...+..++.+..+..++..+..
T Consensus       437 ~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          437 VLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             EEEECHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCHHHHHHHHHHHHcCCCc
Confidence            2468899999999999986643

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.86  E-value=4.6e-22  Score=168.49  Aligned_cols=180  Identities=16%  Similarity=0.070  Sum_probs=127.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP   73 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   73 (285)
                      |. ++|||+||||+||||++++..|+++|+       +|+++++..     ..........++.+.  .+.++ +|+.+.
T Consensus         1 m~-~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~-----~~~~~~g~~~dl~~~--~~~~~-~di~~~   71 (327)
T 1y7t_A            1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ-----AMKALEGVVMELEDC--AFPLL-AGLEAT   71 (327)
T ss_dssp             CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG-----GHHHHHHHHHHHHTT--TCTTE-EEEEEE
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC-----chhhccchhhhhhcc--ccccc-CCeEec
Confidence            54 346899999999999999999999886       899988753     000001111111110  11222 577777


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc-cCC
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD-ETF  151 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~-e~~  151 (285)
                      +.+.+.++++|+|||+||.......++ ..+++.|+.+++++++++++.+ ...+++++|+.....      .++. |..
T Consensus        72 ~~~~~a~~~~D~Vih~Ag~~~~~~~~~-~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~------~~~~~~~~  144 (327)
T 1y7t_A           72 DDPKVAFKDADYALLVGAAPRKAGMER-RDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN------ALIAYKNA  144 (327)
T ss_dssp             SCHHHHTTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH------HHHHHHTC
T ss_pred             cChHHHhCCCCEEEECCCcCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh------HHHHHHHc
Confidence            778888899999999999876544455 4899999999999999999874 334788877643100      0111 111


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCC
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFIC  204 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~  204 (285)
                      +        ..+|..+|+.+|..+|++...+++.+|++.+++||++||||+..
T Consensus       145 ~--------~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~  189 (327)
T 1y7t_A          145 P--------GLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS  189 (327)
T ss_dssp             T--------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred             C--------CCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence            0        01344679999999999999999888999999999999998643

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.84  E-value=6.7e-20  Score=154.91  Aligned_cols=230  Identities=12%  Similarity=-0.002  Sum_probs=123.3

Q ss_pred             CCCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCcc---ccCccchh------------hhhcCCCCC---CCE
Q 023244            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPE---HRNSKDLS------------FLKNLPGAS---ERL   63 (285)
Q Consensus         4 ~~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~------------~~~~~~~~~---~~~   63 (285)
                      .+|++|||||  +|+||++++++|+++|++|++++|++....   ....+...            ...++...+   ...
T Consensus         8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (319)
T 2ptg_A            8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD   87 (319)
T ss_dssp             TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence            4578999999  899999999999999999999986410000   00000000            001110000   012


Q ss_pred             EEEecCC------------CC--------hhhHHHHhc-------CCCEEEEecccCC--C-----CCCChHHHHHHHHH
Q 023244           64 RIFHADL------------SH--------PDGFDAAIA-------GCTGVLHVATPVD--F-----EDKEPEEVITQRAI  109 (285)
Q Consensus        64 ~~~~~Dl------------~d--------~~~~~~~~~-------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~  109 (285)
                      .++..|+            +|        .++++++++       .+|+|||+||...  .     ...+.++..+++|+
T Consensus        88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~  167 (319)
T 2ptg_A           88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS  167 (319)
T ss_dssp             EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred             ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence            4444432            22        334555543       5799999999642  1     11223358899999


Q ss_pred             HHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC-chhHhhHHHHHHHHHHHHHH--
Q 023244          110 NGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG-KSYAISKTLTERAALEFAEE--  185 (285)
Q Consensus       110 ~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~--  185 (285)
                      .++.++++++.+. ..-++||++||.......                      +.. ..|+.||.+.+.+.+.++.+  
T Consensus       168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~----------------------~~~~~~Y~asKaal~~l~~~la~el~  225 (319)
T 2ptg_A          168 YSFVSLLQHFLPLMKEGGSALALSYIASEKVI----------------------PGYGGGMSSAKAALESDCRTLAFEAG  225 (319)
T ss_dssp             HHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------------THHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCceEEEEecccccccc----------------------CccchhhHHHHHHHHHHHHHHHHHhc
Confidence            9999999998765 112699999998764332                      122 36999999988888877765  


Q ss_pred             --cCCcEEEeccCceecCCCCCCCCc----cHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-E
Q 023244          186 --HGLDLVTLIPSMVVGPFICPKFAG----SVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-Y  256 (285)
Q Consensus       186 --~~i~~~i~Rp~~v~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~  256 (285)
                        .|+++++++||.|.++........    ......... ....++     ..+..++|+|+++++++....  ..|. +
T Consensus       226 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~-~~~~p~-----~r~~~peevA~~v~~L~s~~~~~itG~~i  299 (319)
T 2ptg_A          226 RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYS-EANAPL-----QKELESDDVGRAALFLLSPLARAVTGATL  299 (319)
T ss_dssp             HHHCCEEEEEEECCCC-------------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHH-hccCCC-----CCCCCHHHHHHHHHHHhCcccCCccCCEE
Confidence              489999999999988743211000    000000000 001111     257899999999999997532  2454 4


Q ss_pred             EEecc
Q 023244          257 ICSSH  261 (285)
Q Consensus       257 ~~~~~  261 (285)
                      .+.++
T Consensus       300 ~vdGG  304 (319)
T 2ptg_A          300 YVDNG  304 (319)
T ss_dssp             EESTT
T ss_pred             EECCC
Confidence            55554

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.83  E-value=1.9e-19  Score=161.15  Aligned_cols=232  Identities=17%  Similarity=0.136  Sum_probs=156.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCe-EEEE-ecCCCCcccc------CccchhhhhcCCCCCCCEEEEecCCCChhh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTT-VRSELDPEHR------NSKDLSFLKNLPGASERLRIFHADLSHPDG   75 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~   75 (285)
                      +++++|||||+|+||.+++++|+++|++ |+++ +|+.......      .........++...+.++.++.+|++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            4589999999999999999999999987 5555 7774210000      011111222222224579999999999999


Q ss_pred             HHHHhcC------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCC----ccEEEEeccceeeecc
Q 023244           76 FDAAIAG------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGT----VKRVVYTSSNAAVFYN  140 (285)
Q Consensus        76 ~~~~~~~------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~v~~SS~~~~~~~  140 (285)
                      +.++++.      +|.|||+||.....     ..+..+..+++|+.++.+|.+++.....    .++||++||..++.+.
T Consensus       330 v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~  409 (525)
T 3qp9_A          330 AARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGG  409 (525)
T ss_dssp             HHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCC
T ss_pred             HHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCC
Confidence            9999875      59999999986541     1223457899999999999999876531    5799999998875443


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                            +....|+.+|...+.+..++. ..|+++++|.||.+-++. ..  .....   ..+..
T Consensus       410 ----------------------~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~~tgm-~~--~~~~~---~~~~~  460 (525)
T 3qp9_A          410 ----------------------AGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPWEGSR-VT--EGATG---ERLRR  460 (525)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCBTTSG-GG--SSHHH---HHHHH
T ss_pred             ----------------------CCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcccccc-cc--chhhH---HHHHh
Confidence                                  234679999999998876554 458999999999993332 11  11111   11111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKY  276 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~  276 (285)
                      .        ....+..+++++++..++..+...  ..+  ..+.|..+...+....
T Consensus       461 ~--------g~~~l~pee~a~~l~~~l~~~~~~--v~v--~~~dw~~~~~~~~~~~  504 (525)
T 3qp9_A          461 L--------GLRPLAPATALTALDTALGHGDTA--VTI--ADVDWSSFAPGFTTAR  504 (525)
T ss_dssp             T--------TBCCBCHHHHHHHHHHHHHHTCSE--EEE--CCBCHHHHHHHHHSSS
T ss_pred             c--------CCCCCCHHHHHHHHHHHHhCCCCe--EEE--EeCCHHHHHhhccccC
Confidence            1        124689999999999999865432  122  2355666666665443

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.82  E-value=2.4e-19  Score=151.23  Aligned_cols=230  Identities=14%  Similarity=0.039  Sum_probs=141.4

Q ss_pred             CCCeEEEecC--CchhHHHHHHHHHHcCCeEEEEecCCCCcc---ccCccchhhhhcCCCCC--CCEEEEecC-------
Q 023244            4 GKGRVCVTGG--TGFIASWLIMRLLDHGYSVTTTVRSELDPE---HRNSKDLSFLKNLPGAS--ERLRIFHAD-------   69 (285)
Q Consensus         4 ~~k~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~~~~D-------   69 (285)
                      .+|+++||||  +|+||++++++|+++|++|++++|++....   .........+.++....  ..+.++..|       
T Consensus         8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~   87 (315)
T 2o2s_A            8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE   87 (315)
T ss_dssp             TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred             CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence            4689999999  899999999999999999999986420000   00001111112221100  012334333       


Q ss_pred             -----CC--------ChhhHHHHhc-------CCCEEEEecccCC--C-----CCCChHHHHHHHHHHHHHHHHHHHHhc
Q 023244           70 -----LS--------HPDGFDAAIA-------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSCLKS  122 (285)
Q Consensus        70 -----l~--------d~~~~~~~~~-------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~  122 (285)
                           ++        |.++++++++       .+|+|||+||...  .     ...+.++..+++|+.++.++++++.+.
T Consensus        88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~  167 (315)
T 2o2s_A           88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI  167 (315)
T ss_dssp             SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred             hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence                 22        2445555544       5899999999642  1     112233588999999999999998754


Q ss_pred             -CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC-chhHhhHHHHHHHHHHHHHH----cCCcEEEeccC
Q 023244          123 -GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG-KSYAISKTLTERAALEFAEE----HGLDLVTLIPS  196 (285)
Q Consensus       123 -~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~  196 (285)
                       ..-++||++||.......                      +.. ..|+.||.+.+.+.+.++.+    .|+++++++||
T Consensus       168 m~~~g~Iv~isS~~~~~~~----------------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG  225 (315)
T 2o2s_A          168 MNEGGSAVTLSYLAAERVV----------------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAG  225 (315)
T ss_dssp             EEEEEEEEEEEEGGGTSCC----------------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred             HhcCCEEEEEecccccccC----------------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecc
Confidence             112699999998754322                      112 36999999999988887765    48999999999


Q ss_pred             ceecCCCCCC----CCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          197 MVVGPFICPK----FAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       197 ~v~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .|.++.....    .............. ..++     ..+..++|+|.++++++....  ..|. +.+.++
T Consensus       226 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG  291 (315)
T 2o2s_A          226 PLKSRAASAIGKSGEKSFIDYAIDYSYN-NAPL-----RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG  291 (315)
T ss_dssp             CCCCHHHHHTTCSSSSCHHHHHHHHHHH-HSSS-----CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccchhhhhccccccchhHHHHHHHHhc-cCCC-----CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCC
Confidence            9987631110    00111111111110 1112     257899999999999997432  2454 445554

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.82  E-value=1.4e-19  Score=165.21  Aligned_cols=202  Identities=13%  Similarity=0.083  Sum_probs=133.4

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcc-ccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE-HRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ..+|+++||||+|+||++++++|+++|++|++++|...... ..+.+.... ..++......   ..+|++|.+++++++
T Consensus        17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~D~~d~~~~~~~~   93 (613)
T 3oml_A           17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE---AVADYNSVIDGAKVI   93 (613)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC---EEECCCCGGGHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe---EEEEeCCHHHHHHHH
Confidence            35789999999999999999999999999999988220000 001111111 1111111122   247999998888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|+|||+||.....     ..+.++..+++|+.++.++++++    ++.+ .++||++||..+..+.    
T Consensus        94 ~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~~----  168 (613)
T 3oml_A           94 ETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGN----  168 (613)
T ss_dssp             C----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHCC----
T ss_pred             HHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC----
Confidence            6       379999999986541     12233588999999999998887    4444 5799999998765443    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||.+.+.+.+.++.+.   ||+++++.||.+ .+........            
T Consensus       169 ------------------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~~------------  217 (613)
T 3oml_A          169 ------------------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILPD------------  217 (613)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH------------
T ss_pred             ------------------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccch------------
Confidence                              234679999999999999988774   899999999964 2221111100            


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                             .....+.++|+|.++++++...
T Consensus       218 -------~~~~~~~pedvA~~v~~L~s~~  239 (613)
T 3oml_A          218 -------ILFNELKPKLIAPVVAYLCHES  239 (613)
T ss_dssp             -------HHHTTCCGGGTHHHHHHTTSTT
T ss_pred             -------hhhhcCCHHHHHHHHHHhcCCC
Confidence                   0114568899999999999764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.81  E-value=8.8e-19  Score=148.59  Aligned_cols=176  Identities=8%  Similarity=-0.049  Sum_probs=121.5

Q ss_pred             CCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCC-ccc---cCccchhhhhcC-CCCCCCEEEEecCCCCh--h-
Q 023244            5 KGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELD-PEH---RNSKDLSFLKNL-PGASERLRIFHADLSHP--D-   74 (285)
Q Consensus         5 ~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~---~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~--~-   74 (285)
                      +|+++||||++  .||.+++++|+++|++|++.+|++.. ...   ...+........ ......+.++.+|+++.  + 
T Consensus         2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~   81 (329)
T 3lt0_A            2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence            58999999975  99999999999999999977654200 000   000111111111 11123577888998877  6 


Q ss_pred             -----------------hHHHHhc-------CCCEEEEecccCC--C-----CCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 023244           75 -----------------GFDAAIA-------GCTGVLHVATPVD--F-----EDKEPEEVITQRAINGTLGILKSCLKSG  123 (285)
Q Consensus        75 -----------------~~~~~~~-------~~d~vih~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (285)
                                       ++.++++       .+|++||+||...  .     ...+.++..+++|+.++..+.+++...=
T Consensus        82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m  161 (329)
T 3lt0_A           82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence                             6666654       4799999999642  1     1222345889999999999999987641


Q ss_pred             -CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCc-hhHhhHHHHHHHHHHHHHH----cCCcEEEeccCc
Q 023244          124 -TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK-SYAISKTLTERAALEFAEE----HGLDLVTLIPSM  197 (285)
Q Consensus       124 -~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~  197 (285)
                       .-.+||++||.....+.                      +... .|+.||.+.+.+.+.++.+    .|++++++.||.
T Consensus       162 ~~~g~Iv~isS~~~~~~~----------------------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~  219 (329)
T 3lt0_A          162 KPQSSIISLTYHASQKVV----------------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP  219 (329)
T ss_dssp             EEEEEEEEEECGGGTSCC----------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred             hhCCeEEEEeCccccCCC----------------------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecce
Confidence             12589999998754332                      2232 6999999988888777655    489999999999


Q ss_pred             eecCC
Q 023244          198 VVGPF  202 (285)
Q Consensus       198 v~g~~  202 (285)
                      |.++.
T Consensus       220 v~T~~  224 (329)
T 3lt0_A          220 LKSRA  224 (329)
T ss_dssp             CCCHH
T ss_pred             eechh
Confidence            98763

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.75  E-value=1.3e-17  Score=141.73  Aligned_cols=207  Identities=12%  Similarity=0.010  Sum_probs=138.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCCCccccCccc------------hhhhhcCCCCCCCEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKD------------LSFLKNLPGASERLRIFHADL   70 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~Dl   70 (285)
                      .+|++|||||++.||.++++.|++ .|.+|++++|+...    ..+.            ...+..   .+..+..+.+|+
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~----~~~~~~~~gwyn~~~~~~~~~~---~G~~a~~i~~Dv  118 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPG----EEGKPGTSGWYNSAAFHKFAAQ---KGLYAKSINGDA  118 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCC----BTTBCCCHHHHHHHHHHHHHHH---TTCCEEEEESCT
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchh----hhhhcccccchhHHHHHHHHHh---cCCceEEEECCC
Confidence            468999999999999999999999 99999999987621    1111            111222   234688899999


Q ss_pred             CChhhHHHHhc-------CCCEEEEecccCC-------------C--------------------------CCCChHHHH
Q 023244           71 SHPDGFDAAIA-------GCTGVLHVATPVD-------------F--------------------------EDKEPEEVI  104 (285)
Q Consensus        71 ~d~~~~~~~~~-------~~d~vih~a~~~~-------------~--------------------------~~~~~~~~~  104 (285)
                      +|.++++++++       .+|++||+||...             .                          ...+.++..
T Consensus       119 td~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~  198 (405)
T 3zu3_A          119 FSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDST  198 (405)
T ss_dssp             TSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHH
Confidence            99998887775       3799999998740             0                          011223467


Q ss_pred             HHHHHHHHH-HHHHHHHhcC---CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC--chhHhhHHHHHHH
Q 023244          105 TQRAINGTL-GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG--KSYAISKTLTERA  178 (285)
Q Consensus       105 ~~~n~~~~~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~  178 (285)
                      +++|..+.. .+++++....   .-.++|++||.......                      +..  ..|+.||...+.+
T Consensus       199 v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~----------------------p~~~~~aY~AaKaal~~l  256 (405)
T 3zu3_A          199 VAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH----------------------DIYWNGSIGAAKKDLDQK  256 (405)
T ss_dssp             HHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT----------------------TTTTTSHHHHHHHHHHHH
T ss_pred             HHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC----------------------CCccchHHHHHHHHHHHH
Confidence            777877665 5555544321   12689999998754222                      122  6799999999998


Q ss_pred             HHHHHHH---c-CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          179 ALEFAEE---H-GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       179 ~~~~~~~---~-~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      .+.++.+   . |++++++.||.+-++.... ++. .......+..   ++.     .+-..+|+++++.+++..
T Consensus       257 trsLA~Ela~~~GIRVNaVaPG~i~T~~s~~-ip~-~p~y~~~l~~---~mk-----r~G~~Ed~a~~i~~L~sd  321 (405)
T 3zu3_A          257 VLAIRESLAAHGGGDARVSVLKAVVSQASSA-IPM-MPLYLSLLFK---VMK-----EKGTHEGCIEQVYSLYKD  321 (405)
T ss_dssp             HHHHHHHHHTTTSCEEEEEECCCCCCHHHHT-STT-HHHHHHHHHH---HHH-----HHTCCCCHHHHHHHHHHH
T ss_pred             HHHHHHHhCcccCeEEEEEEeCCCcCchhhc-CCC-CcHHHHHHHH---HHh-----cCCCcHHHHHHHHHHHhc
Confidence            8888776   4 8999999999998764222 111 1111111000   111     455667889999999864

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.74  E-value=3.1e-17  Score=149.20  Aligned_cols=222  Identities=14%  Similarity=0.144  Sum_probs=149.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC-CChhhH-HHHh-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL-SHPDGF-DAAI-   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~-~~~~-   80 (285)
                      ++|+++||||++.||+.++++|+++|++|++.+|+.      ..+....+...   +.++..+.+|+ ++.+.+ +++. 
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~------~~~~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~  391 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD------ATKTVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVID  391 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC------CHHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHH
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc------HHHHHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHH
Confidence            468899999999999999999999999999988643      11222233322   23566778888 555432 2222 


Q ss_pred             --cCCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccccc
Q 023244           81 --AGCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        81 --~~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                        ..+|++||+||....     ...+.++..+++|+.++.++.+++.    +.+ -.+||++||.....+.         
T Consensus       392 ~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~---------  461 (604)
T 2et6_A          392 KYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGN---------  461 (604)
T ss_dssp             HHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCC---------
T ss_pred             hcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCC---------
Confidence              358999999997543     1122345889999999888877764    333 4799999998764332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.||.....+.+.++.+   +||++++|.||. .++....    ..        ..  .  
T Consensus       462 -------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~----~~--------~~--~--  511 (604)
T 2et6_A          462 -------------FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLS----IM--------RE--Q--  511 (604)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------------
T ss_pred             -------------CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccc----cC--------ch--h--
Confidence                         23457999999999988888877   489999999984 3332110    00        00  0  


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC-CCc-eEEEec------------------cccCHHHHHHHHHhhCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD-AKG-RYICSS------------------HTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~-~~~-~~~~~~------------------~~~s~~e~~~~i~~~~~  277 (285)
                         ..+...++|+|.++++++.... ..| ++.+.+                  ..++..++.+.+.+...
T Consensus       512 ---~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  579 (604)
T 2et6_A          512 ---DKNLYHADQVAPLLVYLGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITD  579 (604)
T ss_dssp             ----CCSSCGGGTHHHHHHTTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTC
T ss_pred             ---hccCCCHHHHHHHHHHHhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhc
Confidence               0134688999999999986533 233 333332                  23678888888777553

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.73  E-value=3.8e-17  Score=140.19  Aligned_cols=210  Identities=10%  Similarity=-0.043  Sum_probs=136.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCCCccccCccc------------hhhhhcCCCCCCCEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKD------------LSFLKNLPGASERLRIFHADL   70 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~Dl   70 (285)
                      .+|++|||||++.||.++++.|++ .|++|++++|+..    ...+.            ...+...   +..+..+.+|+
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~----~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dv  132 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKP----GTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDA  132 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC----CCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCch----hhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecC
Confidence            468999999999999999999999 9999999998762    11111            1222222   34688899999


Q ss_pred             CChhhHHHHhc--------CCCEEEEecccC-------------CC-C-------------------------CCChHHH
Q 023244           71 SHPDGFDAAIA--------GCTGVLHVATPV-------------DF-E-------------------------DKEPEEV  103 (285)
Q Consensus        71 ~d~~~~~~~~~--------~~d~vih~a~~~-------------~~-~-------------------------~~~~~~~  103 (285)
                      +|.++++++++        .+|++||+||..             .. .                         ..+.++.
T Consensus       133 td~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~  212 (422)
T 3s8m_A          133 FSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIED  212 (422)
T ss_dssp             TSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHH
Confidence            99988777653        379999999862             00 0                         1112235


Q ss_pred             HHHHHHHHHH-HHHHHHHhcC---CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHH
Q 023244          104 ITQRAINGTL-GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAA  179 (285)
Q Consensus       104 ~~~~n~~~~~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~  179 (285)
                      .+++|..+.. .+++++....   .-.++|++||.......+                    ......|+.||...+.+.
T Consensus       213 ~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p--------------------~~~~~aY~ASKaAl~~lT  272 (422)
T 3s8m_A          213 TITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITWP--------------------IYWHGALGKAKVDLDRTA  272 (422)
T ss_dssp             HHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHH--------------------HHTSHHHHHHHHHHHHHH
T ss_pred             HHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCC--------------------CccchHHHHHHHHHHHHH
Confidence            5666655554 5566554321   136899999987532210                    001256999999999998


Q ss_pred             HHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          180 LEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       180 ~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +.++.++   ||+++++.||.|-++.... .+.. ........   .+..     .+-..+|+++.+.+++...
T Consensus       273 rsLA~Ela~~GIRVNaVaPG~i~T~~~~~-ip~~-~~~~~~~~---~~m~-----r~G~pEdva~~v~~L~sd~  336 (422)
T 3s8m_A          273 QRLNARLAKHGGGANVAVLKSVVTQASAA-IPVM-PLYISMVY---KIMK-----EKGLHEGTIEQLDRLFRER  336 (422)
T ss_dssp             HHHHHHHHTTTCEEEEEEECCCCCTTGGG-STHH-HHHHHHHH---HHHH-----HTTCCCCHHHHHHHHHHHT
T ss_pred             HHHHHHhCccCEEEEEEEcCCCcChhhhc-CCCC-hHHHHHHH---hhhc-----CCcChHHHHHHHHHHhcch
Confidence            8888774   8999999999998875332 1111 11111110   0111     3455678899999888543

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.72  E-value=1.8e-16  Score=156.02  Aligned_cols=203  Identities=18%  Similarity=0.122  Sum_probs=140.6

Q ss_pred             CCCCeEEEecCCch-hHHHHHHHHHHcCCeEEEEe-cCCCCccccCccch----hhh-hcCCCCCCCEEEEecCCCChhh
Q 023244            3 EGKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDL----SFL-KNLPGASERLRIFHADLSHPDG   75 (285)
Q Consensus         3 ~~~k~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~Dl~d~~~   75 (285)
                      ..+|++|||||+|+ ||.++++.|+++|++|++++ |+.        +..    ..+ .+....+.++.++.+|++|.++
T Consensus       673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~--------~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~s  744 (1887)
T 2uv8_A          673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFS--------KQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQD  744 (1887)
T ss_dssp             CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCC--------HHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCH--------HHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHH
Confidence            45689999999998 99999999999999999985 544        221    111 1222224578899999999998


Q ss_pred             HHHHhc-------------CCCEEEEecccCCCC------C--CChHHHHHHHHHHHHHHHHHHHHhcC-----CccEEE
Q 023244           76 FDAAIA-------------GCTGVLHVATPVDFE------D--KEPEEVITQRAINGTLGILKSCLKSG-----TVKRVV  129 (285)
Q Consensus        76 ~~~~~~-------------~~d~vih~a~~~~~~------~--~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v  129 (285)
                      +.++++             .+|+|||+||.....      .  .+.++..+++|+.++..++++++...     ..++||
T Consensus       745 V~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IV  824 (1887)
T 2uv8_A          745 VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVIL  824 (1887)
T ss_dssp             HHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEE
T ss_pred             HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEE
Confidence            888764             479999999975432      1  12335889999999999999874322     136899


Q ss_pred             EeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHH-HHHHHHHcC--CcEEEeccCceec-CCCCC
Q 023244          130 YTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA-ALEFAEEHG--LDLVTLIPSMVVG-PFICP  205 (285)
Q Consensus       130 ~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--i~~~i~Rp~~v~g-~~~~~  205 (285)
                      ++||..+..+                        ....|+.||.+.+.+ .+.++.+++  |+++++.||++.| +....
T Consensus       825 nISS~ag~~g------------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~  880 (1887)
T 2uv8_A          825 PMSPNHGTFG------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSA  880 (1887)
T ss_dssp             EECSCTTCSS------------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----
T ss_pred             EEcChHhccC------------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEeccccccccccc
Confidence            9999865422                        123599999999998 566555443  9999999999984 43221


Q ss_pred             CCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          206 KFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      .  .....   .....  +      ..+..++|+|.++++++...
T Consensus       881 ~--~~~~~---~~~~~--p------lr~~sPEEVA~avlfLaSd~  912 (1887)
T 2uv8_A          881 N--NIIAE---GIEKM--G------VRTFSQKEMAFNLLGLLTPE  912 (1887)
T ss_dssp             C--CTTHH---HHHTT--S------CCCEEHHHHHHHHHGGGSHH
T ss_pred             c--hhHHH---HHHhc--C------CCCCCHHHHHHHHHHHhCCC
Confidence            0  11111   11111  1      13568999999999999754

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.71  E-value=2.1e-17  Score=157.98  Aligned_cols=208  Identities=16%  Similarity=0.112  Sum_probs=139.0

Q ss_pred             CCCCCeEEEecCCch-hHHHHHHHHHHcCCeEEEEe-cCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHH
Q 023244            2 EEGKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         2 ~~~~k~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      +.++|++|||||+|+ ||++++++|+++|++|++++ |+..    ...+....+ .+....+.++.++.+|++|.+++++
T Consensus       473 sL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e----~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVea  548 (1688)
T 2pff_A          473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSK----QVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEA  548 (1688)
T ss_dssp             CCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCST----TTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHH
T ss_pred             ccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHH----HHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHH
Confidence            335688999999998 99999999999999999984 5441    011111122 1122224578899999999998888


Q ss_pred             Hhc-------------CCCEEEEecccCCCC----C----CChHHHHHHHHHHHHHHHHHHHHhc-----CCccEEEEec
Q 023244           79 AIA-------------GCTGVLHVATPVDFE----D----KEPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTS  132 (285)
Q Consensus        79 ~~~-------------~~d~vih~a~~~~~~----~----~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~S  132 (285)
                      +++             .+|+|||+||.....    .    .+..+..+++|+.++.+++++++..     ....+||++|
T Consensus       549 LVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnIS  628 (1688)
T 2pff_A          549 LIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMS  628 (1688)
T ss_dssp             HHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCC
T ss_pred             HHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEE
Confidence            764             479999999975332    1    1223588899999999999887322     1136899999


Q ss_pred             cceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHH-HHHHHHHcC--CcEEEeccCceec-CCCCCCCC
Q 023244          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERA-ALEFAEEHG--LDLVTLIPSMVVG-PFICPKFA  208 (285)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-~~~~~~~~~--i~~~i~Rp~~v~g-~~~~~~~~  208 (285)
                      |..+..+                        ....|+.||++.+.+ .+.++.+.+  ++++.+.||.+.| +.....  
T Consensus       629 SiAG~~G------------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~--  682 (1688)
T 2pff_A          629 PNHGTFG------------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN--  682 (1688)
T ss_dssp             SCTTTSS------------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT--
T ss_pred             ChHhccC------------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc--
Confidence            9765322                        124599999999998 444443332  8999999999985 322110  


Q ss_pred             ccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          209 GSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ...          ..... .....+..++|+|.++++++...
T Consensus       683 e~~----------~~~l~-~iplR~~sPEEVA~aIlFLaSd~  713 (1688)
T 2pff_A          683 NII----------AEGIE-KMGVRTFSQKEMAFNLLGLLTPE  713 (1688)
T ss_dssp             TTC----------STTTS-SSSCCCCCCCTTHHHHHHHTSTT
T ss_pred             hHH----------HHHHH-hCCCCCCCHHHHHHHHHHHhCCC
Confidence            000          00000 00113458899999999999765

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.71  E-value=2.5e-17  Score=154.09  Aligned_cols=208  Identities=16%  Similarity=0.163  Sum_probs=148.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHH-HcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLL-DHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++++++||||+|.||+.++++|+ ++|. +|++++|+..    ...+......++...+.++.++.+|++|.++++++++
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~----~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~  604 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGP----AASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLA  604 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGG----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCcc----chHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHH
Confidence            46899999999999999999999 7898 5888899841    0111222222322234579999999999999999886


Q ss_pred             C------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           82 G------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        82 ~------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                      .      +|.|||+|+.....     ..+.++..+++|+.|+.++.+++.. . . +||++||.+...+.          
T Consensus       605 ~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~-l-~iV~~SS~ag~~g~----------  671 (795)
T 3slk_A          605 SIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-D-V-ALVLFSSVSGVLGS----------  671 (795)
T ss_dssp             TSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-T-S-EEEEEEETHHHHTC----------
T ss_pred             HHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-C-C-EEEEEccHHhcCCC----------
Confidence            4      59999999986541     1223357888999999999998832 3 4 99999999876544          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                                  +....|+.+|.+.+.+.+++. ..|++++.|.||.+-+++....   ........+...        .
T Consensus       672 ------------~g~~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~~~~---~~~~~~~~~~~~--------g  727 (795)
T 3slk_A          672 ------------GGQGNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGMAST---LREAEQDRLARS--------G  727 (795)
T ss_dssp             ------------SSCHHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCHHHH---HHHHHHHHHHHT--------T
T ss_pred             ------------CCCHHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchhhcc---ccHHHHHHHHhc--------C
Confidence                        344679999999999888776 5699999999999876542110   000111111111        1


Q ss_pred             cceeeHHHHHHHHHHhhcCCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPDA  252 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~~  252 (285)
                      ...+..++....+..++..+..
T Consensus       728 ~~~l~~~e~~~~~~~~l~~~~~  749 (795)
T 3slk_A          728 LLPISTEEGLSQFDAACGGAHT  749 (795)
T ss_dssp             BCCCCHHHHHHHHHHHHTSSCS
T ss_pred             CCCCCHHHHHHHHHHHHhCCCc
Confidence            2467889999999988876543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.70  E-value=2.7e-16  Score=143.05  Aligned_cols=201  Identities=17%  Similarity=0.130  Sum_probs=129.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcc-ccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPE-HRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||++.||+.+++.|+++|++|++.+|+....- ..+.+.... ..++...+.++   ..|++|.++.+++++
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~~v~   83 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDKIVE   83 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHHHHH
Confidence            4689999999999999999999999999999887530000 000011111 11111111222   246666654444432


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||....     ...+.++..+++|+.++..+.+++.    +.+ -.+||++||.....+.     
T Consensus        84 ~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~~-----  157 (604)
T 2et6_A           84 TAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGN-----  157 (604)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-----
T ss_pred             HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCCC-----
Confidence                   58999999997543     1122335889999999888877753    444 4799999998765333     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||.....+.+.++.+   +||++++|.|+ +..+.....              ..
T Consensus       158 -----------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~--------------~~  205 (604)
T 2et6_A          158 -----------------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESI--------------MP  205 (604)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTT--------------SC
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcccccc--------------CC
Confidence                             23457999999999999888877   48999999997 322210000              00


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..     ......++|+|.++++++...
T Consensus       206 ~~-----~~~~~~pe~vA~~v~~L~s~~  228 (604)
T 2et6_A          206 PP-----MLEKLGPEKVAPLVLYLSSAE  228 (604)
T ss_dssp             HH-----HHTTCSHHHHHHHHHHHTSSS
T ss_pred             hh-----hhccCCHHHHHHHHHHHhCCc
Confidence            00     012468999999999999754

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.69  E-value=3e-16  Score=154.09  Aligned_cols=208  Identities=15%  Similarity=0.063  Sum_probs=140.6

Q ss_pred             CCCCCeEEEecCCch-hHHHHHHHHHHcCCeEEEEecCCCCccccC-ccchhhh-hcCCCCCCCEEEEecCCCChhhHHH
Q 023244            2 EEGKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTVRSELDPEHRN-SKDLSFL-KNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         2 ~~~~k~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      +..+|++|||||+|+ ||.+++++|+++|++|++++++..    .. .+....+ .++...+.++.++.+|++|.+++.+
T Consensus       649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~----~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~a  724 (1878)
T 2uv9_A          649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFS----RQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEA  724 (1878)
T ss_dssp             CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCC----HHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHH
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCh----HHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHH
Confidence            345689999999999 999999999999999999864431    00 0011111 2222224578899999999998888


Q ss_pred             Hhc-----------CCCEEEEecccCCCC----CC----ChHHHHHHHHHHHHHHHHHHHHhc-----CCccEEEEeccc
Q 023244           79 AIA-----------GCTGVLHVATPVDFE----DK----EPEEVITQRAINGTLGILKSCLKS-----GTVKRVVYTSSN  134 (285)
Q Consensus        79 ~~~-----------~~d~vih~a~~~~~~----~~----~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~~v~~SS~  134 (285)
                      +++           .+|+|||+||.....    ..    +.++..+++|+.++.++++.++..     ...++||++||.
T Consensus       725 lv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~  804 (1878)
T 2uv9_A          725 LVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPN  804 (1878)
T ss_dssp             HHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSC
T ss_pred             HHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcch
Confidence            764           479999999975431    11    233588999999999888774321     113689999998


Q ss_pred             eeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-c--CCcEEEeccCcee-cCCCCCCCCcc
Q 023244          135 AAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-H--GLDLVTLIPSMVV-GPFICPKFAGS  210 (285)
Q Consensus       135 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-~--~i~~~i~Rp~~v~-g~~~~~~~~~~  210 (285)
                      .+..+.                        ...|+.||.+.+.++..+..+ +  +++++++.||++. ++....     
T Consensus       805 ag~~gg------------------------~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~-----  855 (1878)
T 2uv9_A          805 HGTFGN------------------------DGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSA-----  855 (1878)
T ss_dssp             SSSSSC------------------------CSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSH-----
T ss_pred             hhccCC------------------------chHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCccccc-----
Confidence            754221                        135999999999987765443 2  3999999999998 553211     


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ...........  .      ..+..++|+|.++++++...
T Consensus       856 ~~~~~~~~~~~--p------lr~~sPeEVA~avlfLaSd~  887 (1878)
T 2uv9_A          856 NNLVAEGVEKL--G------VRTFSQQEMAFNLLGLMAPA  887 (1878)
T ss_dssp             HHHTHHHHHTT--T------CCCBCHHHHHHHHHHHHSHH
T ss_pred             chhhHHHHHhc--C------CCCCCHHHHHHHHHHHhCCc
Confidence            11101111111  1      13458999999999998654

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.67  E-value=1.1e-15  Score=132.17  Aligned_cols=220  Identities=10%  Similarity=-0.054  Sum_probs=135.4

Q ss_pred             CCCeEEEecCCchhHHH--HHHHHHHcCCeEEEEecCCCCccccCcc----chhhhhc-CCCCCCCEEEEecCCCChhhH
Q 023244            4 GKGRVCVTGGTGFIASW--LIMRLLDHGYSVTTTVRSELDPEHRNSK----DLSFLKN-LPGASERLRIFHADLSHPDGF   76 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~   76 (285)
                      .+|++|||||++.||.+  +++.|++.|++|++++|+..........    ....+.+ ....+.++..+.+|++|.+++
T Consensus        59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v  138 (418)
T 4eue_A           59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETK  138 (418)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHH
Confidence            46899999999999999  9999999999999999976211000000    0111111 111234788999999999888


Q ss_pred             HHHhc-------CCCEEEEecccC-------------CC--C------------------------CCChHHHHHHHHHH
Q 023244           77 DAAIA-------GCTGVLHVATPV-------------DF--E------------------------DKEPEEVITQRAIN  110 (285)
Q Consensus        77 ~~~~~-------~~d~vih~a~~~-------------~~--~------------------------~~~~~~~~~~~n~~  110 (285)
                      +++++       .+|++||+||..             ..  .                        ..+..+..+++|..
T Consensus       139 ~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~  218 (418)
T 4eue_A          139 DKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGG  218 (418)
T ss_dssp             HHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhH
Confidence            87765       379999999874             00  0                        11122355555555


Q ss_pred             HHH-HHHHHHHhcC---CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCC--chhHhhHHHHHHHHHHHHH
Q 023244          111 GTL-GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG--KSYAISKTLTERAALEFAE  184 (285)
Q Consensus       111 ~~~-~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~~~~~~~  184 (285)
                      +.. .+++++....   .-.++|++||.......                      +..  ..|+.||.+.+.+.+.++.
T Consensus       219 ~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~----------------------p~~~~~aY~ASKaAL~~ltrsLA~  276 (418)
T 4eue_A          219 EDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY----------------------KIYREGTIGIAKKDLEDKAKLINE  276 (418)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT----------------------TTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC----------------------CccccHHHHHHHHHHHHHHHHHHH
Confidence            444 4555554322   13589999997643222                      222  6799999988888777765


Q ss_pred             H----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce
Q 023244          185 E----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR  255 (285)
Q Consensus       185 ~----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~  255 (285)
                      +    .|++++++.||.|-++.... .+. ..........   ++.     ..-..+|+++.+.+++...-.+|.
T Consensus       277 ELa~~~GIrVN~V~PG~v~T~~s~~-ip~-~p~y~~~~~~---~mk-----~~G~~E~v~e~~~~L~sd~~~~g~  341 (418)
T 4eue_A          277 KLNRVIGGRAFVSVNKALVTKASAY-IPT-FPLYAAILYK---VMK-----EKNIHENCIMQIERMFSEKIYSNE  341 (418)
T ss_dssp             HHHHHHSCEEEEEECCCCCCHHHHT-STT-HHHHHHHHHH---HHH-----HTTCCCCHHHHHHHHHHHTTSSSS
T ss_pred             HhCCccCeEEEEEECCcCcChhhhc-CCC-CcHHHHHHHH---HHh-----hcCChHHHHHHHHHHhhccccCCC
Confidence            5    58999999999998763222 111 1111000000   011     223456888888888875433343

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.47  E-value=1.5e-13  Score=141.61  Aligned_cols=168  Identities=17%  Similarity=0.131  Sum_probs=121.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCe-EEEEecCCCCccccCcc-chhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYS-VTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++||||+|.||+.++++|+++|++ |++++|+..     ..+ ......++...+.++.++.+|++|.++++++++
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~-----~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~ 1957 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGI-----RTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLIT 1957 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCC-----CSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHH
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCc-----chHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHH
Confidence            4678999999999999999999999997 777788761     111 112222221123478889999999998888765


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|+|||+||....      +.+++ +..+++|+.|+.++.+++...- ..++||++||.....+.        
T Consensus      1958 ~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~-~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~-------- 2028 (2512)
T 2vz8_A         1958 EATQLGPVGGVFNLAMVLRDAVLENQTPEFF-QDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN-------- 2028 (2512)
T ss_dssp             HHHHHSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC--------
T ss_pred             HHHhcCCCcEEEECCCcCCCCchhhCCHHHH-HHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC--------
Confidence                  37999999997543      22333 5788999999999988876542 25799999998765333        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceec
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVG  200 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g  200 (285)
                                    +....|+.+|...+.+.+... ..|++...+..|.+-+
T Consensus      2029 --------------~g~~~Y~aaKaal~~l~~~rr-~~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A         2029 --------------AGQANYGFANSAMERICEKRR-HDGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHH-HTTSCCCEEEECCBCT
T ss_pred             --------------CCcHHHHHHHHHHHHHHHHHH-HCCCcEEEEEccCcCC
Confidence                          234579999999999998765 4599999988887644

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=99.46  E-value=1.7e-13  Score=115.67  Aligned_cols=177  Identities=15%  Similarity=0.017  Sum_probs=117.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecC----CCCccccCccchhhhhcCCCCCCCEEEEecC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRS----ELDPEHRNSKDLSFLKNLPGASERLRIFHAD   69 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   69 (285)
                      |++++|||+||||+||+|++++..|+.+|.       +|.+++++    ..    ........+....   ..+   ..|
T Consensus         1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~----~~~g~~~dl~~~~---~~~---~~~   70 (329)
T 1b8p_A            1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQK----ALQGVMMEIDDCA---FPL---LAG   70 (329)
T ss_dssp             --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHH----HHHHHHHHHHTTT---CTT---EEE
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccc----cchhhHHHHhhhc---ccc---cCc
Confidence            655567999999999999999999998875       78888876    20    0000011122210   011   235


Q ss_pred             CCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccc
Q 023244           70 LSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        70 l~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                      +....++.+.++++|+|||+|+.......+.. .++..|+..++++++++++.+ +..+||++|.....-..     ...
T Consensus        71 i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~-dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~-----~~~  144 (329)
T 1b8p_A           71 MTAHADPMTAFKDADVALLVGARPRGPGMERK-DLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAY-----IAM  144 (329)
T ss_dssp             EEEESSHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-----HHH
T ss_pred             EEEecCcHHHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHH-----HHH
Confidence            55556788889999999999998765544554 889999999999999999984 45589988853210000     000


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                      +..+       . -++...|+.++....++...+++..|++..-++...|+|.
T Consensus       145 ~~~~-------~-~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~  189 (329)
T 1b8p_A          145 KSAP-------S-LPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGN  189 (329)
T ss_dssp             HTCT-------T-SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBC
T ss_pred             HHcC-------C-CCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEec
Confidence            0000       0 0122358888888888888888888888777777777774

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.45  E-value=5.2e-12  Score=130.38  Aligned_cols=231  Identities=16%  Similarity=0.130  Sum_probs=144.0

Q ss_pred             CCCeEEEecCCch-hHHHHHHHHHHcCCeEEEEecCCCCccccCcc-chhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGF-IASWLIMRLLDHGYSVTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||++. ||..+++.|+++|.+|++++|+....   ..+ ......+....+.++..+.+|++|.++++++++
T Consensus      2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~---~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDD---RLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHH---HHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhh---hhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            4689999999999 99999999999999999999976100   000 111222233334568889999999998887753


Q ss_pred             -----------CCCEEEEeccc----CCC-------CCCCh---HHHHHHHHHHHHHHHHHHHHh----cCC--ccEEEE
Q 023244           82 -----------GCTGVLHVATP----VDF-------EDKEP---EEVITQRAINGTLGILKSCLK----SGT--VKRVVY  130 (285)
Q Consensus        82 -----------~~d~vih~a~~----~~~-------~~~~~---~~~~~~~n~~~~~~l~~~~~~----~~~--~~~~v~  130 (285)
                                 .+|++|||||.    ...       +.+++   .+..+++|+.++..+++.+.+    .+.  ...+|.
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~ 2291 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVL 2291 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEE
Confidence                       26999999997    111       11222   234588899888887777654    221  112222


Q ss_pred             -eccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH--c--CCcEEEeccCceecCCCCC
Q 023244          131 -TSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE--H--GLDLVTLIPSMVVGPFICP  205 (285)
Q Consensus       131 -~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~--~--~i~~~i~Rp~~v~g~~~~~  205 (285)
                       .|+....  .                      .....|+.||.+.+.+.+.++.+  +  +++++.+.||++-+.....
T Consensus      2292 ~~ss~~g~--~----------------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~ 2347 (3089)
T 3zen_D         2292 PGSPNRGM--F----------------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMG 2347 (3089)
T ss_dssp             EECSSTTS--C----------------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTT
T ss_pred             ECCccccc--C----------------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccc
Confidence             2221110  0                      11235999999999999999988  4  5899999999998543221


Q ss_pred             CCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCC---Cc--eEE-Eecc----ccCHHHHHHHHH
Q 023244          206 KFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDA---KG--RYI-CSSH----TLTIQEMAEFLS  273 (285)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~---~~--~~~-~~~~----~~s~~e~~~~i~  273 (285)
                      ... ...   ......  .     . .....+|+|.++++++.....   ++  ++. ++|+    ..++.++...+.
T Consensus      2348 ~~~-~~~---~~~~~~--~-----~-r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~ 2413 (3089)
T 3zen_D         2348 QND-AIV---SAVEEA--G-----V-TTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKAR 2413 (3089)
T ss_dssp             TTT-TTH---HHHGGG--S-----C-BCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHH
T ss_pred             cch-hHH---HHHHhc--C-----C-CCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHH
Confidence            111 111   111111  1     1 234899999999999864321   12  232 3342    357888777653

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=99.42  E-value=9.4e-13  Score=94.12  Aligned_cols=95  Identities=23%  Similarity=0.262  Sum_probs=76.3

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+|+|+|+ |++|+.+++.|.+.| ++|++++|++        ++...+..     .++.++.+|+++.+.+.++++
T Consensus         3 ~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~--------~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~   68 (118)
T 3ic5_A            3 AMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDL--------AALAVLNR-----MGVATKQVDAKDEAGLAKALG   68 (118)
T ss_dssp             TTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCH--------HHHHHHHT-----TTCEEEECCTTCHHHHHHHTT
T ss_pred             CCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCH--------HHHHHHHh-----CCCcEEEecCCCHHHHHHHHc
Confidence            35689999999 999999999999999 9999999987        44444442     267788999999999999999


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEE
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVV  129 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v  129 (285)
                      ++|+|||+++..                 ....+++++.+.+ +++|.
T Consensus        69 ~~d~vi~~~~~~-----------------~~~~~~~~~~~~g-~~~~~   98 (118)
T 3ic5_A           69 GFDAVISAAPFF-----------------LTPIIAKAAKAAG-AHYFD   98 (118)
T ss_dssp             TCSEEEECSCGG-----------------GHHHHHHHHHHTT-CEEEC
T ss_pred             CCCEEEECCCch-----------------hhHHHHHHHHHhC-CCEEE
Confidence            999999998521                 1247788888888 54444

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=99.31  E-value=1.2e-11  Score=104.20  Aligned_cols=119  Identities=13%  Similarity=0.020  Sum_probs=85.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|||+||||+|++|+.++..|+.+|  ++|+++++++     . ......+..... ...+..    +.+..++.+.++
T Consensus         7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~-----~-~~~~~dL~~~~~-~~~v~~----~~~t~d~~~al~   75 (326)
T 1smk_A            7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVN-----A-PGVTADISHMDT-GAVVRG----FLGQQQLEAALT   75 (326)
T ss_dssp             -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSS-----H-HHHHHHHHTSCS-SCEEEE----EESHHHHHHHHT
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCC-----c-HhHHHHhhcccc-cceEEE----EeCCCCHHHHcC
Confidence            45799999999999999999999988  7899988876     1 111111222110 112221    233456778889


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ++|+|||+|+......... ..++..|+.+++++++++.+.+ .+.+|+++|.-
T Consensus        76 gaDvVi~~ag~~~~~g~~r-~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNP  127 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPGMTR-DDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNP  127 (326)
T ss_dssp             TCSEEEECCCCCCCSSCCC-SHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSS
T ss_pred             CCCEEEEcCCcCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCc
Confidence            9999999999765433333 3778999999999999999998 67777777753

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=99.10  E-value=4.1e-11  Score=99.90  Aligned_cols=117  Identities=14%  Similarity=-0.012  Sum_probs=79.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEec--CCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVR--SELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      |||+||||+|++|+.++..|+.++.  ++.++++  +..    ........+.+......++++.. +  +    .+.++
T Consensus         1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~----~~~~~~~dl~~~~~~~~~~~v~~-~--~----~~a~~   69 (303)
T 1o6z_A            1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKED----DTVGQAADTNHGIAYDSNTRVRQ-G--G----YEDTA   69 (303)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHH----HHHHHHHHHHHHHTTTCCCEEEE-C--C----GGGGT
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChh----hHHHHHHHHHHHHhhCCCcEEEe-C--C----HHHhC
Confidence            4899999999999999999988875  6777777  430    00000111111100112333333 2  2    33467


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ++|+|||+|+......... ..++..|+.+++++++++++.+ .+.+|+++|.-
T Consensus        70 ~aDvVi~~ag~~~~~g~~r-~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNP  121 (303)
T 1o6z_A           70 GSDVVVITAGIPRQPGQTR-IDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNP  121 (303)
T ss_dssp             TCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSS
T ss_pred             CCCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCCh
Confidence            9999999999766544444 3789999999999999999998 67788777754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=99.09  E-value=5.1e-10  Score=93.70  Aligned_cols=166  Identities=12%  Similarity=0.077  Sum_probs=102.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEec--CCCCccccCccchh----hhhcC-CCCCCCEEEEecCCCChhhH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVR--SELDPEHRNSKDLS----FLKNL-PGASERLRIFHADLSHPDGF   76 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~Dl~d~~~~   76 (285)
                      |||+||||+|++|+.++..|+.+|.  ++.++++  +.        ++..    .+... +..+..+.+...+    +++
T Consensus         1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~--------~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l   68 (313)
T 1hye_A            1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSI--------NKLEGLREDIYDALAGTRSDANIYVES----DEN   68 (313)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGH--------HHHHHHHHHHHHHHTTSCCCCEEEEEE----TTC
T ss_pred             CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCch--------hhhHHHHHHHHHhHHhcCCCeEEEeCC----cch
Confidence            4899999999999999999998874  5777776  32        1111    11111 1111122222211    224


Q ss_pred             HHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                      .+.++++|+|||+|+......... ..++..|+.+++++++++++.+  +.+|+++|.-+..-.    .....       
T Consensus        69 ~~al~gaD~Vi~~Ag~~~~~g~~r-~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t----~~~~k-------  134 (313)
T 1hye_A           69 LRIIDESDVVIITSGVPRKEGMSR-MDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMT----YKALV-------  134 (313)
T ss_dssp             GGGGTTCSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHH----HHHHH-------
T ss_pred             HHHhCCCCEEEECCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHH----HHHHH-------
Confidence            556789999999999866544444 4789999999999999999998  566666664321000    00000       


Q ss_pred             hhhhcCCCCchhHh-hHHHHHHHHHHHHHHcCCcEEEeccCceec
Q 023244          157 YIRKLDSWGKSYAI-SKTLTERAALEFAEEHGLDLVTLIPSMVVG  200 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~-sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g  200 (285)
                      .  ..-++...+|. +.....++...+++..|++..-++. .+.|
T Consensus       135 ~--~~~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G  176 (313)
T 1hye_A          135 D--SKFERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIG  176 (313)
T ss_dssp             H--HCCCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEE
T ss_pred             h--hCcChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEee
Confidence            0  00123345777 6666777777777777776555554 4444

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.99  E-value=2.3e-09  Score=78.99  Aligned_cols=102  Identities=12%  Similarity=0.047  Sum_probs=73.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~   82 (285)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|+++++++        +....+...     ....+.+|.++.+.+.++ +++
T Consensus         5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~--------~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~   70 (144)
T 2hmt_A            5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE--------EKVNAYASY-----ATHAVIANATEENELLSLGIRN   70 (144)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH--------HHHHTTTTT-----CSEEEECCTTCHHHHHTTTGGG
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHh-----CCEEEEeCCCCHHHHHhcCCCC
Confidence            3568999998 9999999999999999999999876        333322221     345678999998888776 678


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      +|+||++++..           .+.|.    .+.+.+++.+ ++++|..++..
T Consensus        71 ~d~vi~~~~~~-----------~~~~~----~~~~~~~~~~-~~~ii~~~~~~  107 (144)
T 2hmt_A           71 FEYVIVAIGAN-----------IQAST----LTTLLLKELD-IPNIWVKAQNY  107 (144)
T ss_dssp             CSEEEECCCSC-----------HHHHH----HHHHHHHHTT-CSEEEEECCSH
T ss_pred             CCEEEECCCCc-----------hHHHH----HHHHHHHHcC-CCeEEEEeCCH
Confidence            99999987631           11222    3556677777 66777666544

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.98  E-value=2e-10  Score=95.19  Aligned_cols=81  Identities=15%  Similarity=0.097  Sum_probs=63.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+++||||+|++|+++++.|++.|++|++++|+.        ++...+. ++.. ..++.++.+|++|.+++.+++++
T Consensus       118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~--------~~~~~l~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~  188 (287)
T 1lu9_A          118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL--------DKAQAAADSVNK-RFKVNVTAAETADDASRAEAVKG  188 (287)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHH-HHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH--------HHHHHHHHHHHh-cCCcEEEEecCCCHHHHHHHHHh
Confidence            468999999999999999999999999999999976        2222211 1100 01345677999999999999999


Q ss_pred             CCEEEEecccC
Q 023244           83 CTGVLHVATPV   93 (285)
Q Consensus        83 ~d~vih~a~~~   93 (285)
                      +|+|||+++..
T Consensus       189 ~DvlVn~ag~g  199 (287)
T 1lu9_A          189 AHFVFTAGAIG  199 (287)
T ss_dssp             CSEEEECCCTT
T ss_pred             CCEEEECCCcc
Confidence            99999999854

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=98.95  E-value=1.6e-08  Score=85.45  Aligned_cols=173  Identities=10%  Similarity=-0.054  Sum_probs=106.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHH-HcCCeEEEEecCCCCccccCccch--------hhh-hcCCCCCCCEEEEecCCCCh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLL-DHGYSVTTTVRSELDPEHRNSKDL--------SFL-KNLPGASERLRIFHADLSHP   73 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~~~~~--------~~~-~~~~~~~~~~~~~~~Dl~d~   73 (285)
                      ..|++||||||+.+|.+.+..|+ ..|..|+++.+..+    ...++.        ... +.....+.....+.+|+++.
T Consensus        49 ~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~----~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~  124 (401)
T 4ggo_A           49 APKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKA----GSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSD  124 (401)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCC----CCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCc----ccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCH
Confidence            36899999999999999999998 67999999988652    111110        000 11111244788999999999


Q ss_pred             hhHHHHhc-------CCCEEEEecccCCCCC-------------------------------------CChHHHHHH-HH
Q 023244           74 DGFDAAIA-------GCTGVLHVATPVDFED-------------------------------------KEPEEVITQ-RA  108 (285)
Q Consensus        74 ~~~~~~~~-------~~d~vih~a~~~~~~~-------------------------------------~~~~~~~~~-~n  108 (285)
                      +.++++++       ++|+|||++|......                                     ... +++.. ..
T Consensus       125 e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~-eeie~T~~  203 (401)
T 4ggo_A          125 EIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPAND-EEAAATVK  203 (401)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcH-HHHHHHHH
Confidence            98888875       4799999999652100                                     001 11111 11


Q ss_pred             HHHHH---HHHHHHHhcC---CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHH
Q 023244          109 INGTL---GILKSCLKSG---TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF  182 (285)
Q Consensus       109 ~~~~~---~l~~~~~~~~---~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~  182 (285)
                      +++..   ....+....+   .-.++|-+|+.......            .        ......+|.+|...|...+.+
T Consensus       204 vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~------------P--------~Y~~G~mG~AKaaLEa~~r~L  263 (401)
T 4ggo_A          204 VMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQ------------A--------LYRKGTIGKAKEHLEATAHRL  263 (401)
T ss_dssp             HHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGH------------H--------HHTTSHHHHHHHHHHHHHHHH
T ss_pred             HHhhhHHHHHHHHHHhhhcccCCceEEEEeccCcceee------------c--------CCCccHHHHHHHHHHHHHHHH
Confidence            22211   1222222221   13578877764421110            0        011235899999999999999


Q ss_pred             HHHc-CCcEEEeccCceecC
Q 023244          183 AEEH-GLDLVTLIPSMVVGP  201 (285)
Q Consensus       183 ~~~~-~i~~~i~Rp~~v~g~  201 (285)
                      +.+. ++++.++-++.+-+.
T Consensus       264 a~eL~~~~a~v~v~~a~vT~  283 (401)
T 4ggo_A          264 NKENPSIRAFVSVNKGLVTR  283 (401)
T ss_dssp             HHHCTTEEEEEEECCCCCCT
T ss_pred             HHhcCCCcEEEEEcCccccc
Confidence            8876 577777777777664

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.92  E-value=9.5e-09  Score=90.19  Aligned_cols=105  Identities=16%  Similarity=0.166  Sum_probs=75.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|+|+| +|++|+++++.|++.|++|++.+|+.        ++...+...   ..++..+.+|++|.+++.++++++|
T Consensus         3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~--------~~a~~la~~---~~~~~~~~~Dv~d~~~l~~~l~~~D   70 (450)
T 1ff9_A            3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTL--------ESAKKLSAG---VQHSTPISLDVNDDAALDAEVAKHD   70 (450)
T ss_dssp             CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSH--------HHHHHTTTT---CTTEEEEECCTTCHHHHHHHHTTSS
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCH--------HHHHHHHHh---cCCceEEEeecCCHHHHHHHHcCCc
Confidence            57899998 79999999999999999999999976        333333221   1247788899999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHH--H-------HHHHHHHHHHHHhcC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQR--A-------INGTLGILKSCLKSG  123 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~--n-------~~~~~~l~~~~~~~~  123 (285)
                      +|||+++.....  ......++.  |       ...+.++++++++.|
T Consensus        71 vVIn~a~~~~~~--~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG  116 (450)
T 1ff9_A           71 LVISLIPYTFHA--TVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG  116 (450)
T ss_dssp             EEEECCC--CHH--HHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred             EEEECCccccch--HHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence            999999863321  001111221  1       135678999999888

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.88  E-value=4.2e-09  Score=77.57  Aligned_cols=98  Identities=18%  Similarity=0.214  Sum_probs=71.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~   82 (285)
                      ++++|+|+|+ |.+|+.+++.|.+.|++|+++++++        +....+.+.     .+.++.+|.++++.+.++ +++
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~--------~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~~~~   70 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSK--------EKIELLEDE-----GFDAVIADPTDESFYRSLDLEG   70 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHT-----TCEEEECCTTCHHHHHHSCCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH--------HHHHHHHHC-----CCcEEECCCCCHHHHHhCCccc
Confidence            3578999998 9999999999999999999999987        444444443     567889999999988876 457


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||.+.+       +.     +.|    ..++..+++.+ ..++|...
T Consensus        71 ~d~vi~~~~-------~~-----~~n----~~~~~~a~~~~-~~~iia~~  103 (141)
T 3llv_A           71 VSAVLITGS-------DD-----EFN----LKILKALRSVS-DVYAIVRV  103 (141)
T ss_dssp             CSEEEECCS-------CH-----HHH----HHHHHHHHHHC-CCCEEEEE
T ss_pred             CCEEEEecC-------CH-----HHH----HHHHHHHHHhC-CceEEEEE
Confidence            899997654       11     122    23455566666 56666443

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=98.86  E-value=9.3e-09  Score=88.08  Aligned_cols=97  Identities=20%  Similarity=0.170  Sum_probs=71.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|||+|.|| |++|+.+++.|.+ .++|.+.+++.        +....+.+      .+..+..|+.|.+++.+++
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~--------~~~~~~~~------~~~~~~~d~~d~~~l~~~~   75 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNN--------ENLEKVKE------FATPLKVDASNFDKLVEVM   75 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCH--------HHHHHHTT------TSEEEECCTTCHHHHHHHH
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCH--------HHHHHHhc------cCCcEEEecCCHHHHHHHH
Confidence            4456789999999 9999999999865 58999999876        33333322      4567889999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +++|+||+++++..                 ...++++|.+.|  +++|=+|
T Consensus        76 ~~~DvVi~~~p~~~-----------------~~~v~~~~~~~g--~~yvD~s  108 (365)
T 3abi_A           76 KEFELVIGALPGFL-----------------GFKSIKAAIKSK--VDMVDVS  108 (365)
T ss_dssp             TTCSEEEECCCGGG-----------------HHHHHHHHHHHT--CEEEECC
T ss_pred             hCCCEEEEecCCcc-----------------cchHHHHHHhcC--cceEeee
Confidence            99999999887421                 025677788777  5776554

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=98.81  E-value=3.9e-08  Score=82.22  Aligned_cols=115  Identities=14%  Similarity=0.128  Sum_probs=80.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |||.|+||+|++|+.++..|+..|  .+|.+++++.     . ......+.+... ..++..+.    ...++++.++++
T Consensus         1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-----~-~~~a~dL~~~~~-~~~l~~~~----~t~d~~~a~~~a   69 (314)
T 1mld_A            1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-----T-PGVAADLSHIET-RATVKGYL----GPEQLPDCLKGC   69 (314)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-----H-HHHHHHHTTSSS-SCEEEEEE----SGGGHHHHHTTC
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-----c-HHHHHHHhccCc-CceEEEec----CCCCHHHHhCCC
Confidence            489999999999999999999888  7899999875     0 111112222110 11122211    124577788999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |+||++++.......... ..+..|+...+.+++.+.+.++-.++|++|
T Consensus        70 DvVvi~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~s  117 (314)
T 1mld_A           70 DVVVIPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIIS  117 (314)
T ss_dssp             SEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CEEEECCCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEEC
Confidence            999999998765444443 778999999999999999987445777754

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=98.76  E-value=6.6e-09  Score=87.31  Aligned_cols=120  Identities=16%  Similarity=0.050  Sum_probs=78.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--e-----EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--S-----VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .+||+||||+|++|+.++..|+..+.  +     +.++++...  ..........+....  .+-..    ++.......
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~--~~~~~g~a~DL~~~~--~~~~~----~~~~~~~~~   74 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPM--MGVLDGVLMELQDCA--LPLLK----DVIATDKEE   74 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGG--HHHHHHHHHHHHHTC--CTTEE----EEEEESCHH
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCc--cccchhhHhhhHhhh--hcccC----CEEEcCCcH
Confidence            46899999999999999999988764  4     888887530  000001111122210  01111    222223456


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCcc-EEEEecc
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK-RVVYTSS  133 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~SS  133 (285)
                      +.++++|+|||+||.......+.. +.++.|+..++.+++++++.+... +++.+|-
T Consensus        75 ~~~~daDvVvitAg~prkpG~tR~-dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN  130 (333)
T 5mdh_A           75 IAFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (333)
T ss_dssp             HHTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             HHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence            678899999999997655444443 788999999999999999998323 5666653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.76  E-value=7.1e-08  Score=70.55  Aligned_cols=98  Identities=11%  Similarity=0.046  Sum_probs=69.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      +|+|+|+|+ |++|+.+++.|.+.|++|++++|++        +....+.+.    .++.++.+|.++.+.+.+. ++++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~--------~~~~~~~~~----~~~~~~~~d~~~~~~l~~~~~~~~   70 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK--------DICKKASAE----IDALVINGDCTKIKTLEDAGIEDA   70 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH----CSSEEEESCTTSHHHHHHTTTTTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHHh----cCcEEEEcCCCCHHHHHHcCcccC
Confidence            578999998 9999999999999999999999976        333333321    1456778999988877655 5679


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |+||++...       .     ..|    ..+.+.+++.+ .+++|..+
T Consensus        71 d~vi~~~~~-------~-----~~~----~~~~~~~~~~~-~~~ii~~~  102 (140)
T 1lss_A           71 DMYIAVTGK-------E-----EVN----LMSSLLAKSYG-INKTIARI  102 (140)
T ss_dssp             SEEEECCSC-------H-----HHH----HHHHHHHHHTT-CCCEEEEC
T ss_pred             CEEEEeeCC-------c-----hHH----HHHHHHHHHcC-CCEEEEEe
Confidence            999998541       1     122    24455666666 56777543

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.75  E-value=3.7e-08  Score=77.84  Aligned_cols=76  Identities=20%  Similarity=0.349  Sum_probs=54.4

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+||||||                ||.+|.++++.|+.+|++|+++.|..        ...      +.....+..+ 
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~--------~~~------~~~~~~~~~~-   66 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKR--------ALK------PEPHPNLSIR-   66 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTT--------SCC------CCCCTTEEEE-
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCc--------ccc------ccCCCCeEEE-
Confidence            4789999999                99999999999999999999999965        100      0001244443 


Q ss_pred             cCCCChhh----HHHHhcCCCEEEEecccCCC
Q 023244           68 ADLSHPDG----FDAAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        68 ~Dl~d~~~----~~~~~~~~d~vih~a~~~~~   95 (285)
                       |+...++    +.+.+.++|++||+||..++
T Consensus        67 -~v~s~~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           67 -EITNTKDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             -ECCSHHHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             -EHhHHHHHHHHHHHhcCCCCEEEEcCccccc
Confidence             4445443    33344568999999998766

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.75  E-value=1.2e-08  Score=88.44  Aligned_cols=100  Identities=19%  Similarity=0.245  Sum_probs=72.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC---CeEEEEecCCCCccccCccchhhhhc-CCC-CCCCEEEEecCCCChhhHHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLKN-LPG-ASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ||+|+|+|| |++|+.+++.|++.|   .+|++.+|+.        ++...+.+ +.. ...++..+.+|++|.+++.++
T Consensus         1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~--------~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~   71 (405)
T 4ina_A            1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTL--------SKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL   71 (405)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCH--------HHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCH--------HHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH
Confidence            368999999 999999999999988   3899999986        33332221 110 113578899999999999999


Q ss_pred             hcC--CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           80 IAG--CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        80 ~~~--~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +++  +|+|||++++...                 ..++++|.+.+  .+++-++
T Consensus        72 l~~~~~DvVin~ag~~~~-----------------~~v~~a~l~~g--~~vvD~a  107 (405)
T 4ina_A           72 INEVKPQIVLNIALPYQD-----------------LTIMEACLRTG--VPYLDTA  107 (405)
T ss_dssp             HHHHCCSEEEECSCGGGH-----------------HHHHHHHHHHT--CCEEESS
T ss_pred             HHhhCCCEEEECCCcccC-----------------hHHHHHHHHhC--CCEEEec
Confidence            987  8999999874210                 25667777777  4555443

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.68  E-value=3.7e-07  Score=68.18  Aligned_cols=75  Identities=13%  Similarity=0.092  Sum_probs=58.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~   82 (285)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|++++|++        +....+..    ..++..+.+|..+.+.+.+. +++
T Consensus        18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~--------~~~~~~~~----~~g~~~~~~d~~~~~~l~~~~~~~   84 (155)
T 2g1u_A           18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNE--------YAFHRLNS----EFSGFTVVGDAAEFETLKECGMEK   84 (155)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG--------GGGGGSCT----TCCSEEEESCTTSHHHHHTTTGGG
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHh----cCCCcEEEecCCCHHHHHHcCccc
Confidence            4578999997 9999999999999999999999987        33333321    11456778899888777765 678


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      +|+||.+.+
T Consensus        85 ad~Vi~~~~   93 (155)
T 2g1u_A           85 ADMVFAFTN   93 (155)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEEeC
Confidence            999998765

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=98.59  E-value=3.7e-07  Score=76.85  Aligned_cols=113  Identities=10%  Similarity=0.007  Sum_probs=75.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      +++||.|+|++|++|+.++..|+..|  .+|.+++.+.        ++..    .+........++.       -..++.
T Consensus         7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~--------~k~~g~a~DL~~~~~~~~~i~-------~t~d~~   71 (343)
T 3fi9_A            7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA--------VGLEGVAEEIRHCGFEGLNLT-------FTSDIK   71 (343)
T ss_dssp             CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH--------HHHHHHHHHHHHHCCTTCCCE-------EESCHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc--------hhHHHHHHhhhhCcCCCCceE-------EcCCHH
Confidence            46799999999999999999999888  5899999865        2211    1222111111222       123466


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccE-EEEec
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKR-VVYTS  132 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~v~~S  132 (285)
                      +.++++|+||.+||......... .+.++.|+...+.+.+.+.+.++-.. ++.+|
T Consensus        72 ~al~dADvVvitaG~p~kpG~~R-~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvs  126 (343)
T 3fi9_A           72 EALTDAKYIVSSGGAPRKEGMTR-EDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIF  126 (343)
T ss_dssp             HHHTTEEEEEECCC-------CH-HHHHHHHHHHHHHHHHHHHHHCTTCCEEEECS
T ss_pred             HHhCCCCEEEEccCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhccCcEEEEEec
Confidence            67889999999999765544444 37889999999999999999873342 55554

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=98.58  E-value=5.2e-07  Score=75.49  Aligned_cols=115  Identities=14%  Similarity=0.136  Sum_probs=79.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhh----hhcC-CCCCCCEEEEecCCCCh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSF----LKNL-PGASERLRIFHADLSHP   73 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~Dl~d~   73 (285)
                      |++..+||.|+|+ |++|+.++..|+..|.  +|++++++.        ++...    +... +.....+.....|   .
T Consensus         1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~--------~k~~g~a~DL~~~~~~~~~~v~i~~~~---~   68 (326)
T 3pqe_A            1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNK--------EKAMGDVMDLNHGKAFAPQPVKTSYGT---Y   68 (326)
T ss_dssp             -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHHHTGGGSSSCCEEEEEC---G
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecch--------HHHHHHHHHHHhccccccCCeEEEeCc---H
Confidence            6666789999997 9999999999998886  899999865        22211    2221 1111234444333   1


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                          +.++++|+||.+||......... .+.++.|+...+.+.+.+.+.++-..++.+|
T Consensus        69 ----~a~~~aDvVvi~ag~p~kpG~~R-~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvt  122 (326)
T 3pqe_A           69 ----EDCKDADIVCICAGANQKPGETR-LELVEKNLKIFKGIVSEVMASGFDGIFLVAT  122 (326)
T ss_dssp             ----GGGTTCSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             ----HHhCCCCEEEEecccCCCCCccH-HHHHHHHHHHHHHHHHHHHHhcCCeEEEEcC
Confidence                35678999999999765544444 3788999999999999999987444555554

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.57  E-value=8.9e-08  Score=84.22  Aligned_cols=77  Identities=19%  Similarity=0.232  Sum_probs=62.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++|+|+|+|| |++|+.+++.|++. |++|++.+|+.        ++...+.+.    .++..+.+|+.|.+++.+++++
T Consensus        22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~--------~ka~~la~~----~~~~~~~~D~~d~~~l~~~l~~   88 (467)
T 2axq_A           22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTL--------ANAQALAKP----SGSKAISLDVTDDSALDKVLAD   88 (467)
T ss_dssp             -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSH--------HHHHHHHGG----GTCEEEECCTTCHHHHHHHHHT
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCH--------HHHHHHHHh----cCCcEEEEecCCHHHHHHHHcC
Confidence            4678999998 99999999999988 78999999986        444433322    1456778999999999999999


Q ss_pred             CCEEEEecccC
Q 023244           83 CTGVLHVATPV   93 (285)
Q Consensus        83 ~d~vih~a~~~   93 (285)
                      +|+|||+++..
T Consensus        89 ~DvVIn~tp~~   99 (467)
T 2axq_A           89 NDVVISLIPYT   99 (467)
T ss_dssp             SSEEEECSCGG
T ss_pred             CCEEEECCchh
Confidence            99999998864

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.56  E-value=3.4e-07  Score=68.20  Aligned_cols=77  Identities=21%  Similarity=0.304  Sum_probs=59.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++++++++       +....+...  ...++.++.+|.++++.+.++ ++++
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~-------~~~~~~~~~--~~~~~~~i~gd~~~~~~l~~a~i~~a   72 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPE-------DDIKQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRC   72 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCH-------HHHHHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCCh-------HHHHHHHHh--hcCCCeEEEcCCCCHHHHHHcChhhC
Confidence            568999997 99999999999999999999999740       222222211  012578899999999999887 7889


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||-+.+
T Consensus        73 d~vi~~~~   80 (153)
T 1id1_A           73 RAILALSD   80 (153)
T ss_dssp             SEEEECSS
T ss_pred             CEEEEecC
Confidence            99997644

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=98.56  E-value=1.9e-07  Score=73.63  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=54.9

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+||||||                ||.+|.++++.|+++|++|+++.+..        ..     ..+   ..+.  .
T Consensus         7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~--------~l-----~~~---~g~~--~   68 (226)
T 1u7z_A            7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPV--------SL-----PTP---PFVK--R   68 (226)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSC--------CC-----CCC---TTEE--E
T ss_pred             CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCc--------cc-----ccC---CCCe--E
Confidence            4689999999                79999999999999999999988754        00     011   1233  4


Q ss_pred             cCCCChhhHHHH----hcCCCEEEEecccCCC
Q 023244           68 ADLSHPDGFDAA----IAGCTGVLHVATPVDF   95 (285)
Q Consensus        68 ~Dl~d~~~~~~~----~~~~d~vih~a~~~~~   95 (285)
                      .|+++.+++.+.    +..+|++||+||...+
T Consensus        69 ~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           69 VDVMTALEMEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             EECCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             EccCcHHHHHHHHHHhcCCCCEEEECCcccCC
Confidence            677776655443    3468999999998654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=98.48  E-value=4.6e-07  Score=66.42  Aligned_cols=74  Identities=14%  Similarity=0.117  Sum_probs=61.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~   82 (285)
                      .+++|+|+|+ |.+|+.+++.|.+.|++|+++++++        +....+.+.     ++.++.+|.++++.+.++ +++
T Consensus         6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~--------~~~~~~~~~-----g~~~i~gd~~~~~~l~~a~i~~   71 (140)
T 3fwz_A            6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSR--------TRVDELRER-----GVRAVLGNAANEEIMQLAHLEC   71 (140)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHT-----TCEEEESCTTSHHHHHHTTGGG
T ss_pred             CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHc-----CCCEEECCCCCHHHHHhcCccc
Confidence            3568999998 9999999999999999999999988        555555543     678899999999988775 567


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      +|+||-+.+
T Consensus        72 ad~vi~~~~   80 (140)
T 3fwz_A           72 AKWLILTIP   80 (140)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEECC
Confidence            899986643

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.47  E-value=7.3e-07  Score=68.48  Aligned_cols=73  Identities=16%  Similarity=0.114  Sum_probs=59.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH--hc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA--IA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~   81 (285)
                      +++|+|+|+ |.+|+.+++.|.+. |++|+++++++        ++...+.+.     ++..+.+|.++.+.+.++  ++
T Consensus        39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~--------~~~~~~~~~-----g~~~~~gd~~~~~~l~~~~~~~  104 (183)
T 3c85_A           39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIRE--------EAAQQHRSE-----GRNVISGDATDPDFWERILDTG  104 (183)
T ss_dssp             TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCH--------HHHHHHHHT-----TCCEEECCTTCHHHHHTBCSCC
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCH--------HHHHHHHHC-----CCCEEEcCCCCHHHHHhccCCC
Confidence            468999996 99999999999999 99999999987        444444443     566788999998888876  77


Q ss_pred             CCCEEEEecc
Q 023244           82 GCTGVLHVAT   91 (285)
Q Consensus        82 ~~d~vih~a~   91 (285)
                      ++|+||.+.+
T Consensus       105 ~ad~vi~~~~  114 (183)
T 3c85_A          105 HVKLVLLAMP  114 (183)
T ss_dssp             CCCEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            8999997654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=98.37  E-value=6.3e-07  Score=70.91  Aligned_cols=72  Identities=21%  Similarity=0.250  Sum_probs=58.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      |+|+|+|+ |.+|+.+++.|.+.|++|+++++++        +....+.+.    .++.++.+|.++.+.+.++ ++++|
T Consensus         1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~--------~~~~~l~~~----~~~~~i~gd~~~~~~l~~a~i~~ad   67 (218)
T 3l4b_C            1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDR--------ELCEEFAKK----LKATIIHGDGSHKEILRDAEVSKND   67 (218)
T ss_dssp             CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCH--------HHHHHHHHH----SSSEEEESCTTSHHHHHHHTCCTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH--------HHHHHHHHH----cCCeEEEcCCCCHHHHHhcCcccCC
Confidence            47999997 9999999999999999999999987        444443321    1567899999999998887 67899


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      +||-+.
T Consensus        68 ~vi~~~   73 (218)
T 3l4b_C           68 VVVILT   73 (218)
T ss_dssp             EEEECC
T ss_pred             EEEEec
Confidence            999653

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=98.35  E-value=6.3e-06  Score=68.91  Aligned_cols=118  Identities=7%  Similarity=0.082  Sum_probs=71.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+++++||.|+|+ |++|..++..|+..+.  +|.+++.+..    ........+.+.......+++..   .+.    +
T Consensus         3 m~~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~----~~~g~~~dl~~~~~~~~~~~i~~---~~~----~   70 (318)
T 1y6j_A            3 MVKSRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE----KAIGEAMDINHGLPFMGQMSLYA---GDY----S   70 (318)
T ss_dssp             ----CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC-------CCHHHHHHTTSCCCTTCEEEC-----CG----G
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChH----HHHHHHHHHHHhHHhcCCeEEEE---CCH----H
Confidence            4334578999998 9999999999999886  8999998761    00111222222111112333332   232    2


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      .++++|+||.+++......... .+....|+...+.+++.+.+.++-..+|.+
T Consensus        71 a~~~aDvVii~~g~p~k~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (318)
T 1y6j_A           71 DVKDCDVIVVTAGANRKPGETR-LDLAKKNVMIAKEVTQNIMKYYNHGVILVV  122 (318)
T ss_dssp             GGTTCSEEEECCCC------CH-HHHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             HhCCCCEEEEcCCCCCCCCcCH-HHHHHhhHHHHHHHHHHHHHhCCCcEEEEe
Confidence            4689999999998755433344 377889999999999999988734445543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=98.30  E-value=8e-06  Score=67.90  Aligned_cols=173  Identities=14%  Similarity=0.051  Sum_probs=99.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-C--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-G--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||.|+||+|++|+.++..|..+ +  .++.+++...     ......-.+...+   ....+... ..  ....+.+++
T Consensus         1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-----~~~G~a~Dl~~~~---~~~~v~~~-~~--~~~~~~~~~   69 (312)
T 3hhp_A            1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-----VTPGVAVDLSHIP---TAVKIKGF-SG--EDATPALEG   69 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-----THHHHHHHHHTSC---SSEEEEEE-CS--SCCHHHHTT
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-----CchhHHHHhhCCC---CCceEEEe-cC--CCcHHHhCC
Confidence            58999999999999999999875 4  4788888865     1111122222221   12222211 01  112345679


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCccc-ccCCCCchhhhhhc
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM-DETFWSDVDYIRKL  161 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~-~e~~~~~~~~~~~~  161 (285)
                      +|+||-.||.......+.. +.++.|....+.+.+.+.+.++-..++.+|-. +-.-     .++ .| .   .. ....
T Consensus        70 aDivii~ag~~rkpG~~R~-dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNP-vd~~-----t~~a~~-~---~k-~sg~  137 (312)
T 3hhp_A           70 ADVVLISAGVARKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIITNP-VNTT-----VAIAAE-V---LK-KAGV  137 (312)
T ss_dssp             CSEEEECCSCSCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEECSSC-HHHH-----HHHHHH-H---HH-HTTC
T ss_pred             CCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCcEEEEecCc-chhH-----HHHHHH-H---HH-HcCC
Confidence            9999999997665555554 88999999999999999988744456655421 1000     000 00 0   00 0000


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCC
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPF  202 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~  202 (285)
                      -++....|.+-...-++-..+++..|++..-++ +.|.|..
T Consensus       138 ~p~~rv~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H  177 (312)
T 3hhp_A          138 YDKNKLFGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH  177 (312)
T ss_dssp             CCTTSEEECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred             CCcceEEEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence            022234555533344555555666677766666 5677654

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=98.30  E-value=2.4e-06  Score=71.35  Aligned_cols=112  Identities=12%  Similarity=0.097  Sum_probs=66.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .++||.|+|+ |.+|+.++..|+..|.  ++.+++++.        ++..    .+.........+.....|   .    
T Consensus         8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~--------~k~~g~a~DL~~~~~~~~~~~i~~~~---~----   71 (326)
T 3vku_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK--------DKTKGDAIDLEDALPFTSPKKIYSAE---Y----   71 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHHTTGGGSCCCEEEECC---G----
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh--------HHHHHHHhhHhhhhhhcCCcEEEECc---H----
Confidence            4679999997 9999999999998886  899998865        2221    122111011234433332   2    


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +.++++|+||.+||......... .+.++.|+.-.+.+.+.+.+.++-..++.+|
T Consensus        72 ~a~~~aDiVvi~ag~~~kpG~tR-~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvt  125 (326)
T 3vku_A           72 SDAKDADLVVITAGAPQKPGETR-LDLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGTTCSEEEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECS
T ss_pred             HHhcCCCEEEECCCCCCCCCchH-HHHHHHHHHHHHHHHHHHHhcCCceEEEEcc
Confidence            34678999999999755433333 3778899999999999999887444555554

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=98.27  E-value=4.6e-06  Score=69.49  Aligned_cols=118  Identities=15%  Similarity=0.084  Sum_probs=78.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC-CCccccCcc-chhhhhcC-C--CCCCCEEEEecCCCChh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE-LDPEHRNSK-DLSFLKNL-P--GASERLRIFHADLSHPD   74 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-~~~~~~~~~-~~~~~~~~-~--~~~~~~~~~~~Dl~d~~   74 (285)
                      |.++.++|.|+|+ |.+|+.++..|+..|+ +|+++++++ +    ...+ ....+... +  ....++.. ..   |. 
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~----~~~~g~a~dl~~~~~~~~~~~~i~~-t~---d~-   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLE----NPTKGKALDMLEASPVQGFDANIIG-TS---DY-   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGH----HHHHHHHHHHHHHHHHHTCCCCEEE-ES---CG-
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchH----HHHHHhhhhHHHhhhhccCCCEEEE-cC---CH-
Confidence            5444679999997 9999999999999999 999999872 0    0000 00011110 0  00112221 11   22 


Q ss_pred             hHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                         +.++++|+||-++|.......... +.++.|+...+.+.+.+.+.++-..++.+|
T Consensus        74 ---~a~~~aDvVIiaag~p~kpg~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~vlvvs  127 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKPGMSRD-DLVATNSKIMKSITRDIAKHSPNAIIVVLT  127 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             ---HHhCCCCEEEEeCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhCCCeEEEECC
Confidence               356789999999997665555554 888999999999999999887444566555

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.26  E-value=1.3e-06  Score=67.88  Aligned_cols=98  Identities=17%  Similarity=0.064  Sum_probs=64.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH---h
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA---I   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~   80 (285)
                      .+++|+|+||+|.+|..+++.+...|.+|++++|+.        ++.....+..   ...   ..|.++.+..+.+   .
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--------~~~~~~~~~g---~~~---~~d~~~~~~~~~~~~~~  103 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD--------AKREMLSRLG---VEY---VGDSRSVDFADEILELT  103 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHTTC---CSE---EEETTCSTHHHHHHHHT
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcC---CCE---EeeCCcHHHHHHHHHHh
Confidence            467999999999999999999998999999999876        4444444331   111   2366655433333   3


Q ss_pred             c--CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           81 A--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        81 ~--~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      .  ++|+||++++.          ..       ....++.++..   .++|.+++..
T Consensus       104 ~~~~~D~vi~~~g~----------~~-------~~~~~~~l~~~---G~~v~~g~~~  140 (198)
T 1pqw_A          104 DGYGVDVVLNSLAG----------EA-------IQRGVQILAPG---GRFIELGKKD  140 (198)
T ss_dssp             TTCCEEEEEECCCT----------HH-------HHHHHHTEEEE---EEEEECSCGG
T ss_pred             CCCCCeEEEECCch----------HH-------HHHHHHHhccC---CEEEEEcCCC
Confidence            2  48999999862          11       12334444433   5899988754

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=98.21  E-value=1.7e-05  Score=66.70  Aligned_cols=122  Identities=14%  Similarity=0.071  Sum_probs=76.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|||.|+|| |.+|+.++..|+..|+ +|++++++.........+....+.... ...++..       ..++++.
T Consensus         5 ~~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~-~~~~i~~-------t~d~~ea   75 (331)
T 1pzg_A            5 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVD-TNVSVRA-------EYSYEAA   75 (331)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTT-CCCCEEE-------ECSHHHH
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccC-CCCEEEE-------eCCHHHH
Confidence            3344579999999 9999999999999998 999999876100000000001111110 1112221       1335556


Q ss_pred             hcCCCEEEEecccCCCCCC-----ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           80 IAGCTGVLHVATPVDFEDK-----EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      ++++|+||-.++.......     ... .....|+...+.+++.+.+.. ..-++.+.|
T Consensus        76 ~~~aDiVi~a~g~p~~~g~~~~~~~r~-dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~t  132 (331)
T 1pzg_A           76 LTGADCVIVTAGLTKVPGKPDSEWSRN-DLLPFNSKIIREIGQNIKKYC-PKTFIIVVT  132 (331)
T ss_dssp             HTTCSEEEECCSCSSCTTCCGGGCCGG-GGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred             hCCCCEEEEccCCCCCCCcccCCCCHH-HHHHHHHHHHHHHHHHHHHHC-CCcEEEEEc
Confidence            7899999999976544322     333 667888999999999998887 344443444

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=98.13  E-value=1.7e-05  Score=66.10  Aligned_cols=115  Identities=13%  Similarity=0.078  Sum_probs=70.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCC---CCCCCEEEEecCCCChhhHHHHh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLP---GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +|||.|+|| |++|+.++..|+..|+ +|.+++++...    .......+.+..   ....++... .|      + +.+
T Consensus         2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~----~~g~~~dl~~~~~~~~~~~~i~~t-~d------~-~a~   68 (309)
T 1ur5_A            2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGV----PQGKALDLYEASPIEGFDVRVTGT-NN------Y-ADT   68 (309)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSH----HHHHHHHHHTTHHHHTCCCCEEEE-SC------G-GGG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccH----HHHHHHhHHHhHhhcCCCeEEEEC-CC------H-HHH
Confidence            468999999 9999999999999986 88888887510    000011111110   001122211 22      2 346


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      +++|+||.+++......... ......|....+.+.+.+.+.+ ...+|.+.|.
T Consensus        69 ~~aD~Vi~a~g~p~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tN  120 (309)
T 1ur5_A           69 ANSDVIVVTSGAPRKPGMSR-EDLIKVNADITRACISQAAPLS-PNAVIIMVNN  120 (309)
T ss_dssp             TTCSEEEECCCC---------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCS
T ss_pred             CCCCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCC
Confidence            78999999998755433222 2667888899999999999887 5555555554

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=98.12  E-value=3.1e-05  Score=63.79  Aligned_cols=111  Identities=11%  Similarity=0.051  Sum_probs=76.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh----hhhcC-CCCCCCEEEEecCCCChhhHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNL-PGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |||.|+|| |.+|+.++..|+..|+  +|.++++++        ++..    .+... +.......+...  +|    .+
T Consensus         1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~--------~~~~g~~~dl~~~~~~~~~~~~i~~t--~d----~~   65 (294)
T 1oju_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAE--------DLAVGEAMDLAHAAAGIDKYPKIVGG--AD----YS   65 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSH--------HHHHHHHHHHHHHHHTTTCCCEEEEE--SC----GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCh--------HHHHHHHHHHHhhhhhcCCCCEEEEe--CC----HH
Confidence            58999999 9999999999998887  899999976        2221    11110 000112222211  12    33


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      .++++|+||..++......... .+.+..|....+.+.+.+.+.++-..++.+|
T Consensus        66 a~~~aDiVViaag~~~kpG~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs  118 (294)
T 1oju_A           66 LLKGSEIIVVTAGLARKPGMTR-LDLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             GGTTCSEEEECCCCCCCSSCCH-HHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             HhCCCCEEEECCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            5678999999999765544444 3788999999999999999987455666655

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=98.10  E-value=3.5e-06  Score=67.35  Aligned_cols=70  Identities=13%  Similarity=0.106  Sum_probs=57.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      .++|+|+|+ |.+|+.+++.|.+.|+ |+++++++        +....+. .     ++.++.+|.+|++.+.++ ++++
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~--------~~~~~~~-~-----~~~~i~gd~~~~~~l~~a~i~~a   72 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDEN--------VRKKVLR-S-----GANFVHGDPTRVSDLEKANVRGA   72 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGG--------GHHHHHH-T-----TCEEEESCTTCHHHHHHTTCTTC
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCH--------HHHHHHh-c-----CCeEEEcCCCCHHHHHhcCcchh
Confidence            468999998 9999999999999999 99999887        4444443 2     578899999999999887 7889


Q ss_pred             CEEEEec
Q 023244           84 TGVLHVA   90 (285)
Q Consensus        84 d~vih~a   90 (285)
                      |.||-+.
T Consensus        73 d~vi~~~   79 (234)
T 2aef_A           73 RAVIVDL   79 (234)
T ss_dssp             SEEEECC
T ss_pred             cEEEEcC
Confidence            9999764

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=98.05  E-value=5e-05  Score=63.59  Aligned_cols=113  Identities=16%  Similarity=0.099  Sum_probs=77.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      ..+||.|+|+ |.+|+.++..|+..|.  ++.+++++.        ++..    .+............+..  .|.+   
T Consensus        18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~--------~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---   83 (331)
T 4aj2_A           18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIE--------DKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---   83 (331)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCH--------HHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCCh--------HHHHHHHHhhhhhhhccCCCeEEEc--CCHH---
Confidence            4579999998 9999999999998886  899998865        2111    12221100111122222  1222   


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                       .++++|+||.+||.......... +.++.|+.-.+.+.+.+.+.++-..++.+|
T Consensus        84 -~~~~aDiVvi~aG~~~kpG~tR~-dL~~~N~~I~~~i~~~i~~~~p~a~vlvvt  136 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQEGESRL-NLVQRNVNIFKFIIPNVVKYSPQCKLLIVS  136 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             -HhCCCCEEEEccCCCCCCCccHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence             36789999999998665555554 889999999999999999987444666555

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.03  E-value=1e-05  Score=68.64  Aligned_cols=74  Identities=19%  Similarity=0.297  Sum_probs=53.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+++|||+||+|.+|..+++.+...|.+|++++|+.        ++...+.++.     .. ...|+++.+++.+.++  
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~--------~~~~~~~~~g-----~~-~~~d~~~~~~~~~~~~~~  234 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGE--------GKEELFRSIG-----GE-VFIDFTKEKDIVGAVLKA  234 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECST--------THHHHHHHTT-----CC-EEEETTTCSCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCH--------HHHHHHHHcC-----Cc-eEEecCccHhHHHHHHHH
Confidence            457899999999999999999998999999999887        4444444442     11 1237665444443332  


Q ss_pred             ---CCCEEEEecc
Q 023244           82 ---GCTGVLHVAT   91 (285)
Q Consensus        82 ---~~d~vih~a~   91 (285)
                         ++|+||++++
T Consensus       235 ~~~~~D~vi~~~g  247 (347)
T 2hcy_A          235 TDGGAHGVINVSV  247 (347)
T ss_dssp             HTSCEEEEEECSS
T ss_pred             hCCCCCEEEECCC
Confidence               5899999987

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=98.03  E-value=4.7e-05  Score=63.60  Aligned_cols=116  Identities=9%  Similarity=-0.036  Sum_probs=76.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCC-CCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++||.|+|+ |.+|+.++..|+..|. +|.++++++..    .......+..... ......+...  .|.    +.+++
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~----~~g~a~dL~~~~~~~~~~~~v~~t--~d~----~a~~~   73 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGM----PNGKALDLLQTCPIEGVDFKVRGT--NDY----KDLEN   73 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSH----HHHHHHHHHTTHHHHTCCCCEEEE--SCG----GGGTT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHH----HHHHHHHHHhhhhhcCCCcEEEEc--CCH----HHHCC
Confidence            578999996 9999999999999887 99999987710    0001111221100 0011222211  122    35678


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||..++......... .+.+..|+...+.+.+.+.+.++-..++.+|
T Consensus        74 aDvVIi~ag~p~k~G~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  122 (321)
T 3p7m_A           74 SDVVIVTAGVPRKPGMSR-DDLLGINIKVMQTVGEGIKHNCPNAFVICIT  122 (321)
T ss_dssp             CSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEcCCcCCCCCCCH-HHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            999999998765544444 3788899999999999999987444666554

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=98.00  E-value=6.1e-05  Score=62.92  Aligned_cols=110  Identities=15%  Similarity=0.050  Sum_probs=73.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchh----hhhcC---CCCCCCEEEEecCCCChhhH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS----FLKNL---PGASERLRIFHADLSHPDGF   76 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~Dl~d~~~~   76 (285)
                      ++||.|+|| |.+|+.++..|+..|+ +|+++++++        ++..    .+...   .....++.. ..|   .   
T Consensus         7 ~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~~v~~-t~d---~---   70 (324)
T 3gvi_A            7 RNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAE--------GTPQGKGLDIAESSPVDGFDAKFTG-AND---Y---   70 (324)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS--------SHHHHHHHHHHHHHHHHTCCCCEEE-ESS---G---
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCc--------hhHHHHHHHHhchhhhcCCCCEEEE-eCC---H---
Confidence            579999998 9999999999999988 999999977        2211    11111   000112221 122   2   


Q ss_pred             HHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                       +.++++|+||..++.......... +.+..|+...+.+.+.+.+.++-..++.+|
T Consensus        71 -~a~~~aDiVIiaag~p~k~G~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~iivvt  124 (324)
T 3gvi_A           71 -AAIEGADVVIVTAGVPRKPGMSRD-DLLGINLKVMEQVGAGIKKYAPEAFVICIT  124 (324)
T ss_dssp             -GGGTTCSEEEECCSCCCC-----C-HHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             -HHHCCCCEEEEccCcCCCCCCCHH-HHHHhhHHHHHHHHHHHHHHCCCeEEEecC
Confidence             456789999999987554333333 678889999999999999887444566555

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=97.99  E-value=3.3e-06  Score=66.35  Aligned_cols=72  Identities=24%  Similarity=0.247  Sum_probs=49.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEE-ecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF-HADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d   84 (285)
                      |+|+|+||+|++|+.+++.|++.|++|++++|++        +....+.+..    .. .+ ..|+. .+++.+.++++|
T Consensus         1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~--------~~~~~~~~~~----~~-~~~~~~~~-~~~~~~~~~~~D   66 (212)
T 1jay_A            1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE--------EKAEAKAAEY----RR-IAGDASIT-GMKNEDAAEACD   66 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH--------HHHHHHHHHH----HH-HHSSCCEE-EEEHHHHHHHCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHh----cc-ccccCCCC-hhhHHHHHhcCC
Confidence            4799999999999999999999999999999976        2222221100    00 00 02222 234666778899


Q ss_pred             EEEEecc
Q 023244           85 GVLHVAT   91 (285)
Q Consensus        85 ~vih~a~   91 (285)
                      +||++..
T Consensus        67 ~Vi~~~~   73 (212)
T 1jay_A           67 IAVLTIP   73 (212)
T ss_dssp             EEEECSC
T ss_pred             EEEEeCC
Confidence            9999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=97.99  E-value=8.9e-06  Score=68.53  Aligned_cols=74  Identities=16%  Similarity=0.201  Sum_probs=53.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+++|+||||+|.+|..+++.+...|.+|++++++.        ++...++++..   .   ...|.++.+++.+.+.  
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~--------~~~~~~~~~g~---~---~~~d~~~~~~~~~~~~~~  210 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD--------EKIAYLKQIGF---D---AAFNYKTVNSLEEALKKA  210 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S---EEEETTSCSCHHHHHHHH
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhcCC---c---EEEecCCHHHHHHHHHHH
Confidence            457899999999999999999999999999999876        44444444411   1   2246666333333332  


Q ss_pred             ---CCCEEEEecc
Q 023244           82 ---GCTGVLHVAT   91 (285)
Q Consensus        82 ---~~d~vih~a~   91 (285)
                         ++|+||+++|
T Consensus       211 ~~~~~d~vi~~~g  223 (333)
T 1v3u_A          211 SPDGYDCYFDNVG  223 (333)
T ss_dssp             CTTCEEEEEESSC
T ss_pred             hCCCCeEEEECCC
Confidence               4899999988

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.98  E-value=0.00014  Score=61.13  Aligned_cols=173  Identities=12%  Similarity=-0.010  Sum_probs=99.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-------eEEEEecCCCCccccCcc---chhhhhcCCCCCCCEEEEecCCCChh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-------SVTTTVRSELDPEHRNSK---DLSFLKNLPGASERLRIFHADLSHPD   74 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~   74 (285)
                      ..||.|+||+|.||+.|+..|+....       ++.+++..+     ....   ..-.+...... .....+..     .
T Consensus        24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~-----~~~~~~Gva~DL~~~~~~-~~~~~~~~-----~   92 (345)
T 4h7p_A           24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEP-----ALKALAGVEAELEDCAFP-LLDKVVVT-----A   92 (345)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG-----GHHHHHHHHHHHHHTTCT-TEEEEEEE-----S
T ss_pred             CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCC-----ccccchhhhhhhhhcCcc-CCCcEEEc-----C
Confidence            34899999999999999998876532       577777643     0000   01112222111 11222222     1


Q ss_pred             hHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      +..+.++++|+||-.||.......... +.++.|..-.+.+.+.+.+.. +-.+++.+|-. +-.-.    ...-+.   
T Consensus        93 ~~~~a~~~advVvi~aG~prkpGmtR~-DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP-vd~~~----~i~~~~---  163 (345)
T 4h7p_A           93 DPRVAFDGVAIAIMCGAFPRKAGMERK-DLLEMNARIFKEQGEAIAAVAASDCRVVVVGNP-ANTNA----LILLKS---  163 (345)
T ss_dssp             CHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS-HHHHH----HHHHHH---
T ss_pred             ChHHHhCCCCEEEECCCCCCCCCCCHH-HHHHHhHHHHHHHHHHHHhhccCceEEEEeCCC-cchHH----HHHHHH---
Confidence            245678899999999998777666664 899999999999999998864 22345555421 10000    000000   


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecC
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP  201 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~  201 (285)
                          .....++....+.+....-++-..++++.|++..-++-..|.|.
T Consensus       164 ----~~g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~  207 (345)
T 4h7p_A          164 ----AQGKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGN  207 (345)
T ss_dssp             ----TTTCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBC
T ss_pred             ----ccCCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecC
Confidence                00001223345555555566666666677777666665555554

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=97.98  E-value=9.1e-06  Score=69.48  Aligned_cols=75  Identities=16%  Similarity=0.181  Sum_probs=57.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+++|+|+|+ |.+|+.+++.|...|++|++++|++        ++...+.+ ..   ..   +..|..+.+.+.+.+++
T Consensus       165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~--------~~~~~~~~~~g---~~---~~~~~~~~~~l~~~~~~  229 (369)
T 2eez_A          165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNH--------KRLQYLDDVFG---GR---VITLTATEANIKKSVQH  229 (369)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTT---TS---EEEEECCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHhcC---ce---EEEecCCHHHHHHHHhC
Confidence            3589999999 9999999999999999999999987        34333332 21   12   34567778888888889


Q ss_pred             CCEEEEecccC
Q 023244           83 CTGVLHVATPV   93 (285)
Q Consensus        83 ~d~vih~a~~~   93 (285)
                      +|+||++++..
T Consensus       230 ~DvVi~~~g~~  240 (369)
T 2eez_A          230 ADLLIGAVLVP  240 (369)
T ss_dssp             CSEEEECCC--
T ss_pred             CCEEEECCCCC
Confidence            99999998854

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.98  E-value=6.4e-05  Score=62.95  Aligned_cols=112  Identities=12%  Similarity=0.079  Sum_probs=73.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccch----hhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDL----SFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      +++||.|+|| |.+|+.++..|+..+.  ++.+++++.        ++.    ..+.........+.+.. |  +    .
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~i~~-~--~----~   71 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFK--------DKTKGDAIDLSNALPFTSPKKIYS-A--E----Y   71 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCH--------HHHHHHHHHHHTTGGGSCCCEEEE-C--C----G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc--------hHhHHHHHHHHHHHHhcCCeEEEE-C--C----H
Confidence            4579999999 9999999999988775  899998865        222    11222110112333332 2  2    2


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +.++++|+||..++.......... ..+..|+...+.+.+.+.+.++-..++.+|
T Consensus        72 ~a~~~aDvVii~ag~~~k~g~~R~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  125 (326)
T 2zqz_A           72 SDAKDADLVVITAGAPQKPGETRL-DLVNKNLKILKSIVDPIVDSGFNGIFLVAA  125 (326)
T ss_dssp             GGGGGCSEEEECCCCC-----CHH-HHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             HHhCCCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            346799999999987655444443 778899999999999999887455666553

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=97.97  E-value=6.7e-06  Score=72.32  Aligned_cols=71  Identities=20%  Similarity=0.319  Sum_probs=60.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHH-hc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAA-IA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~-~~   81 (285)
                      ..|+|+|.|+ |-+|+.|++.|.++||+|+++++++        +....+.+ +     .+..+.||.++++.++++ ++
T Consensus         2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~--------~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~   67 (461)
T 4g65_A            2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDG--------DRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQ   67 (461)
T ss_dssp             CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCH--------HHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTT
T ss_pred             CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCC
Confidence            3579999999 9999999999999999999999987        55555443 3     678899999999999887 56


Q ss_pred             CCCEEEE
Q 023244           82 GCTGVLH   88 (285)
Q Consensus        82 ~~d~vih   88 (285)
                      ++|.+|-
T Consensus        68 ~ad~~ia   74 (461)
T 4g65_A           68 DADMLVA   74 (461)
T ss_dssp             TCSEEEE
T ss_pred             cCCEEEE
Confidence            7999884

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.93  E-value=5.2e-06  Score=69.07  Aligned_cols=111  Identities=7%  Similarity=0.019  Sum_probs=71.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh----hhhcCCC-CCCCEEEEecCCCChhhHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPG-ASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |||.|+|+ |.+|+.++..|+..|.  +|.++++++        ++..    .+..... ......+...|  +.    +
T Consensus         1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~--------~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~----~   65 (314)
T 3nep_X            1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKD--------GMPQGKALDMRESSPIHGFDTRVTGTN--DY----G   65 (314)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSST--------THHHHHHHHHHHHHHHHTCCCEEEEES--SS----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCch--------HHHHHHHHHHhccccccCCCcEEEECC--CH----H
Confidence            58999997 9999999999998886  899999877        2211    1111000 00122222111  22    3


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      .++++|+||-+||.......+. .+.++.|+...+.+.+.+.+.++-..++.+|
T Consensus        66 a~~~aDvVii~ag~~~kpG~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt  118 (314)
T 3nep_X           66 PTEDSDVCIITAGLPRSPGMSR-DDLLAKNTEIVGGVTEQFVEGSPDSTIIVVA  118 (314)
T ss_dssp             GGTTCSEEEECCCC-------C-HHHHHHHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred             HhCCCCEEEECCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHHhCCCcEEEecC
Confidence            5678999999999765544444 3888999999999999999887444555555

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.93  E-value=1.4e-05  Score=69.27  Aligned_cols=74  Identities=18%  Similarity=0.227  Sum_probs=61.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~   82 (285)
                      .+++|+|+|+ |-+|+.+++.|.+.|++|+++++++        +....+...     ++.++.+|.++++.+.++ +++
T Consensus         3 ~~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~--------~~v~~~~~~-----g~~vi~GDat~~~~L~~agi~~   68 (413)
T 3l9w_A            3 HGMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDP--------DHIETLRKF-----GMKVFYGDATRMDLLESAGAAK   68 (413)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCH--------HHHHHHHHT-----TCCCEESCTTCHHHHHHTTTTT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCH--------HHHHHHHhC-----CCeEEEcCCCCHHHHHhcCCCc
Confidence            3568999998 9999999999999999999999988        555555543     567889999999999887 678


Q ss_pred             CCEEEEecc
Q 023244           83 CTGVLHVAT   91 (285)
Q Consensus        83 ~d~vih~a~   91 (285)
                      +|+||-+..
T Consensus        69 A~~viv~~~   77 (413)
T 3l9w_A           69 AEVLINAID   77 (413)
T ss_dssp             CSEEEECCS
T ss_pred             cCEEEECCC
Confidence            899886543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.92  E-value=0.00012  Score=61.16  Aligned_cols=114  Identities=12%  Similarity=0.088  Sum_probs=74.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++||.|+|| |.+|+.++..|+..|  .+|.+++.+..    ........+.. .+..+..+.+.. |  +    .+.++
T Consensus         6 ~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~----~~~g~~~dl~~~~~~~~~~~~v~~-~--~----~~a~~   73 (317)
T 3d0o_A            6 GNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTE----KVRGDVMDLKHATPYSPTTVRVKA-G--E----YSDCH   73 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHH----HHHHHHHHHHHHGGGSSSCCEEEE-C--C----GGGGT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChh----HhhhhhhhHHhhhhhcCCCeEEEe-C--C----HHHhC
Confidence            469999999 999999999999887  48888887641    00000111111 111112333332 2  2    23467


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      ++|+||..++.......... ..+..|+...+.+.+.+.+.++-..+|.+
T Consensus        74 ~aDvVvi~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~  122 (317)
T 3d0o_A           74 DADLVVICAGAAQKPGETRL-DLVSKNLKIFKSIVGEVMASKFDGIFLVA  122 (317)
T ss_dssp             TCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred             CCCEEEECCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhCCCcEEEEe
Confidence            99999999987655444443 77889999999999999988744455553

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.90  E-value=4.1e-05  Score=63.91  Aligned_cols=111  Identities=13%  Similarity=0.128  Sum_probs=70.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      ++||.|+|| |.+|+.++..|+..+.  ++.+++++.        ++..    .+.........+++.. |  +    .+
T Consensus         5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~--------~~~~g~~~dl~~~~~~~~~~~v~~-~--~----~~   68 (318)
T 1ez4_A            5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVK--------DRTKGDALDLEDAQAFTAPKKIYS-G--E----YS   68 (318)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHGGGGGSCCCEEEE-C--C----GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCc--------hHHHHHHHHHHHHHHhcCCeEEEE-C--C----HH
Confidence            468999999 9999999999988775  899999865        2221    1111110112333332 2  2    23


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      .++++|+||..++......... .+.+..|+...+.+.+.+.+.++-..++.+|
T Consensus        69 a~~~aDvVii~ag~~~~~g~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  121 (318)
T 1ez4_A           69 DCKDADLVVITAGAPQKPGESR-LDLVNKNLNILSSIVKPVVDSGFDGIFLVAA  121 (318)
T ss_dssp             GGTTCSEEEECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred             HhCCCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            4679999999998755433333 3678899999999999999987455666553

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=97.89  E-value=7.5e-06  Score=66.82  Aligned_cols=38  Identities=24%  Similarity=0.395  Sum_probs=29.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRS   38 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~   38 (285)
                      |..++++|+|+|++|.+|+.+++.+.+ .+++++++.+.
T Consensus         1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~   39 (273)
T 1dih_A            1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALER   39 (273)
T ss_dssp             -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECC
T ss_pred             CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEec
Confidence            665568999999999999999999875 47888755443

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.88  E-value=1.2e-05  Score=66.94  Aligned_cols=83  Identities=10%  Similarity=0.047  Sum_probs=57.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++|+|+ |.+|+.++..|++.|. +|+++.|+.     ...++...+. ++... ........++.+.+++.+.+.
T Consensus       153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~-----~~~~~a~~la~~~~~~-~~~~~~~~~~~~~~~l~~~l~  225 (315)
T 3tnl_A          153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKD-----DFYANAEKTVEKINSK-TDCKAQLFDIEDHEQLRKEIA  225 (315)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS-----TTHHHHHHHHHHHHHH-SSCEEEEEETTCHHHHHHHHH
T ss_pred             cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCC-----chHHHHHHHHHHhhhh-cCCceEEeccchHHHHHhhhc
Confidence            4689999998 8999999999999998 899999983     1113332222 11000 022333456677777888888


Q ss_pred             CCCEEEEecccC
Q 023244           82 GCTGVLHVATPV   93 (285)
Q Consensus        82 ~~d~vih~a~~~   93 (285)
                      ++|+||++-...
T Consensus       226 ~aDiIINaTp~G  237 (315)
T 3tnl_A          226 ESVIFTNATGVG  237 (315)
T ss_dssp             TCSEEEECSSTT
T ss_pred             CCCEEEECccCC
Confidence            999999987653

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.87  E-value=1.3e-05  Score=67.40  Aligned_cols=74  Identities=8%  Similarity=-0.047  Sum_probs=52.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH---h
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA---I   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~   80 (285)
                      .+++|+|+||+|.+|..+++.+...|++|++++++.        ++...+.++..   ..   ..|.++.+..+++   .
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~--------~~~~~~~~~g~---~~---~~~~~~~~~~~~~~~~~  205 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA--------QKAQSALKAGA---WQ---VINYREEDLVERLKEIT  205 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHTC---SE---EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcCC---CE---EEECCCccHHHHHHHHh
Confidence            457999999999999999999999999999999876        44444443311   11   2355554433333   2


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  ++|+||+++|
T Consensus       206 ~~~~~D~vi~~~g  218 (327)
T 1qor_A          206 GGKKVRVVYDSVG  218 (327)
T ss_dssp             TTCCEEEEEECSC
T ss_pred             CCCCceEEEECCc
Confidence            2  4899999988

>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A

Probab=97.87  E-value=3.7e-05  Score=64.98  Aligned_cols=97  Identities=11%  Similarity=0.169  Sum_probs=58.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-----C-eEEEEecCCCCccccCccchhhhhcCCCCC--CCEEEEecCCCChhhH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-----Y-SVTTTVRSELDPEHRNSKDLSFLKNLPGAS--ERLRIFHADLSHPDGF   76 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~   76 (285)
                      |++|+|.||||++|+.|++.|.+++     + +++++.+..     ...+.....  .+...  ..+.+  .|+ +.+  
T Consensus         9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~-----~agk~~~~~--~~~l~~~~~~~~--~~~-~~~--   76 (352)
T 2nqt_A            9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAAT-----SAGSTLGEH--HPHLTPLAHRVV--EPT-EAA--   76 (352)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESS-----CTTSBGGGT--CTTCGGGTTCBC--EEC-CHH--
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCC-----cCCCchhhh--cccccccceeee--ccC-CHH--
Confidence            4699999999999999999999877     3 777776433     011111110  01000  01111  122 222  


Q ss_pred             HHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                        .++++|+||.+.+...                 +..+++.+ +.|  .++|-+|+..
T Consensus        77 --~~~~~DvVf~alg~~~-----------------s~~~~~~~-~~G--~~vIDlSa~~  113 (352)
T 2nqt_A           77 --VLGGHDAVFLALPHGH-----------------SAVLAQQL-SPE--TLIIDCGADF  113 (352)
T ss_dssp             --HHTTCSEEEECCTTSC-----------------CHHHHHHS-CTT--SEEEECSSTT
T ss_pred             --HhcCCCEEEECCCCcc-----------------hHHHHHHH-hCC--CEEEEECCCc
Confidence              2458999998876432                 13455666 667  5899999875

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=97.87  E-value=7.9e-05  Score=61.25  Aligned_cols=115  Identities=10%  Similarity=0.038  Sum_probs=74.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||.|+|| |.+|+.++..|+.++  .++.+++....    ......-.+... +...........  .|.+    .+++
T Consensus         1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~----~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~----~~~~   69 (294)
T 2x0j_A            1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAED----LAVGEAMDLAHAAAGIDKYPKIVGG--ADYS----LLKG   69 (294)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHH----HHHHHHHHHHHHHGGGTCCCEEEEE--SCGG----GGTT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCC----cchhhhhhhhcccccCCCCCeEecC--CCHH----HhCC
Confidence            58999996 999999999998876  37888887540    000011111110 001112222221  1222    3578


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||-.||.......... +.++.|..-.+.+.+.+.+.++-..++.+|
T Consensus        70 aDvVvitAG~prkpGmtR~-dLl~~Na~I~~~i~~~i~~~~p~aivlvvs  118 (294)
T 2x0j_A           70 SEIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENAPESKILVVT  118 (294)
T ss_dssp             CSEEEECCCCCCCSSSCHH-HHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred             CCEEEEecCCCCCCCCchH-HHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence            9999999998777666664 889999999999999999988334444444

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=97.86  E-value=1.9e-05  Score=67.09  Aligned_cols=74  Identities=11%  Similarity=0.052  Sum_probs=53.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh---HHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~   80 (285)
                      .+++|+|+||+|.+|..+++.+...|.+|+++++++        ++.....++..   .   ...|..+.+.   +.+..
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga---~---~~~d~~~~~~~~~~~~~~  235 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE--------EGQKIVLQNGA---H---EVFNHREVNYIDKIKKYV  235 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S---EEEETTSTTHHHHHHHHH
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh--------hHHHHHHHcCC---C---EEEeCCCchHHHHHHHHc
Confidence            457899999999999999999999999999999876        44444444421   1   1245555443   33333


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  ++|+||+++|
T Consensus       236 ~~~~~D~vi~~~G  248 (351)
T 1yb5_A          236 GEKGIDIIIEMLA  248 (351)
T ss_dssp             CTTCEEEEEESCH
T ss_pred             CCCCcEEEEECCC
Confidence            3  5899999988

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=97.85  E-value=1.6e-05  Score=67.00  Aligned_cols=75  Identities=16%  Similarity=0.119  Sum_probs=53.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|+|+||+|.+|..+++.+...|++|++++|+.        ++...+.++..   ..   ..|.++.+   .+.+..
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~--------~~~~~~~~~g~---~~---~~d~~~~~~~~~i~~~~  210 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTE--------EKAETARKLGC---HH---TINYSTQDFAEVVREIT  210 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHTC---SE---EEETTTSCHHHHHHHHH
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---CE---EEECCCHHHHHHHHHHh
Confidence            457899999999999999999999999999999976        44444443311   11   23555543   333333


Q ss_pred             c--CCCEEEEeccc
Q 023244           81 A--GCTGVLHVATP   92 (285)
Q Consensus        81 ~--~~d~vih~a~~   92 (285)
                      .  ++|+||+++|.
T Consensus       211 ~~~~~d~vi~~~g~  224 (333)
T 1wly_A          211 GGKGVDVVYDSIGK  224 (333)
T ss_dssp             TTCCEEEEEECSCT
T ss_pred             CCCCCeEEEECCcH
Confidence            2  58999999984

>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1

Probab=97.84  E-value=4.2e-05  Score=64.49  Aligned_cols=93  Identities=15%  Similarity=0.162  Sum_probs=55.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC---eEEEEe-cCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTV-RSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +++|+|.||||++|+.+++.|.++++   +++++. ++.      ..+...    ..  +..+.+.  |+ +++.    +
T Consensus         6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~------~g~~~~----~~--g~~i~~~--~~-~~~~----~   66 (340)
T 2hjs_A            6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAES------AGQRMG----FA--ESSLRVG--DV-DSFD----F   66 (340)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTT------TTCEEE----ET--TEEEECE--EG-GGCC----G
T ss_pred             CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCC------CCCccc----cC--CcceEEe--cC-CHHH----h
Confidence            46899999999999999999986654   455554 222      000000    10  0112221  22 1222    4


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      +++|+||-+.+..                 .+..+++.+.+.| + ++|.+|+.+
T Consensus        67 ~~~DvV~~a~g~~-----------------~s~~~a~~~~~aG-~-kvId~Sa~~  102 (340)
T 2hjs_A           67 SSVGLAFFAAAAE-----------------VSRAHAERARAAG-C-SVIDLSGAL  102 (340)
T ss_dssp             GGCSEEEECSCHH-----------------HHHHHHHHHHHTT-C-EEEETTCTT
T ss_pred             cCCCEEEEcCCcH-----------------HHHHHHHHHHHCC-C-EEEEeCCCC
Confidence            6799999876621                 1345666677778 4 688888764

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.83  E-value=0.00018  Score=60.07  Aligned_cols=115  Identities=16%  Similarity=0.041  Sum_probs=75.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcC-CCC-CCCEEEEecCCCChhhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNL-PGA-SERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ..+||.|+|+ |.+|+.++..|+..|.  +|.+++.+..    ........+... +.. ..++ ....|+.+       
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~----~~~g~a~DL~~~~~~~~~~~i-~~t~d~~~-------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMED----KLKGEMMDLEHGSLFLHTAKI-VSGKDYSV-------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHH----HHHHHHHHHHHHGGGSCCSEE-EEESSSCS-------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHH----HHHHHHHHhhhhhhcccCCeE-EEcCCHHH-------
Confidence            4579999999 9999999999998886  8999998651    000000111111 101 1122 12234322       


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++++|+||-+||.......... +.+..|+.-.+.+.+.+.+.++-..++.+|
T Consensus        87 ~~daDiVIitaG~p~kpG~tR~-dll~~N~~I~k~i~~~I~k~~P~a~ilvvt  138 (330)
T 3ldh_A           87 SAGSKLVVITAGARQQEGESRL-NLVQRNVNIFKFIIPNIVKHSPDCLKELHP  138 (330)
T ss_dssp             CSSCSEEEECCSCCCCSSCCTT-GGGHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             hCCCCEEEEeCCCCCCCCCCHH-HHHHhhHHHHHHHHHHHHhhCCCceEEeCC
Confidence            5789999999998665444443 778889999999999999887445566555

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.82  E-value=0.00016  Score=60.09  Aligned_cols=113  Identities=16%  Similarity=0.164  Sum_probs=66.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |||.|+|| |.+|+.++..|+..|+  +|++++++..    ........+...........+..   .+.    +.++++
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~----~~~~~~~~l~~~~~~~~~~~i~~---~~~----~a~~~a   68 (304)
T 2v6b_A            1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDED----RAQAEAEDIAHAAPVSHGTRVWH---GGH----SELADA   68 (304)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHH----HHHHHHHHHTTSCCTTSCCEEEE---ECG----GGGTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHH----HHHHHHHhhhhhhhhcCCeEEEE---CCH----HHhCCC
Confidence            48999999 9999999999999998  9999998761    00001111111110111222222   122    246789


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      |+||.+++......... .+.+..|+...+.+++.+.+.++-..+|.+
T Consensus        69 DvVIi~~~~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~  115 (304)
T 2v6b_A           69 QVVILTAGANQKPGESR-LDLLEKNADIFRELVPQITRAAPDAVLLVT  115 (304)
T ss_dssp             SEEEECC-------------CHHHHHHHHHHHHHHHHHHCSSSEEEEC
T ss_pred             CEEEEcCCCCCCCCCcH-HHHHHhHHHHHHHHHHHHHHhCCCeEEEEe
Confidence            99999997654433333 266788999999999999887633344443

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=97.82  E-value=0.0002  Score=60.74  Aligned_cols=120  Identities=10%  Similarity=-0.019  Sum_probs=74.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--e---EEEEecCCCCccccCccchhhhhcCCC-CCCCEEEEecCCCChhhHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--S---VTTTVRSELDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~---V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      .+||.|+||+|.+|+.++..|+..+.  +   +.+.+.+............-.+..... ...++..  .     ..-.+
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~i--~-----~~~y~  104 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI--G-----IDPYE  104 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE--E-----SCHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcEE--e-----cCCHH
Confidence            46899999999999999999988753  2   666554331000000001111222110 0112222  1     12345


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~S  132 (285)
                      .++++|+||-.||.......... +.++.|..-.+.+.+.+.+. ++-..++.+|
T Consensus       105 ~~~daDvVVitag~prkpG~tR~-DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvs  158 (375)
T 7mdh_A          105 VFEDVDWALLIGAKPRGPGMERA-ALLDINGQIFADQGKALNAVASKNVKVLVVG  158 (375)
T ss_dssp             HTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             HhCCCCEEEEcCCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            67899999999997665555554 88999999999999999886 5345566555

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=97.82  E-value=1.9e-05  Score=66.77  Aligned_cols=74  Identities=12%  Similarity=0.086  Sum_probs=51.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhh----HHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDG----FDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~----~~~   78 (285)
                      .+++|||+||+|.+|..+++.+...|.+|++++++.        ++...+. ++..   ..   ..|..+.++    +.+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~--------~~~~~~~~~~g~---~~---~~d~~~~~~~~~~~~~  220 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSK--------EKVDLLKTKFGF---DD---AFNYKEESDLTAALKR  220 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTSCC---SE---EEETTSCSCSHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHcCC---ce---EEecCCHHHHHHHHHH
Confidence            457999999999999999999988999999999876        4444444 3411   11   235554322    332


Q ss_pred             Hh-cCCCEEEEecc
Q 023244           79 AI-AGCTGVLHVAT   91 (285)
Q Consensus        79 ~~-~~~d~vih~a~   91 (285)
                      +. .++|+||++++
T Consensus       221 ~~~~~~d~vi~~~g  234 (345)
T 2j3h_A          221 CFPNGIDIYFENVG  234 (345)
T ss_dssp             HCTTCEEEEEESSC
T ss_pred             HhCCCCcEEEECCC
Confidence            22 25899999987

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=97.81  E-value=0.00015  Score=60.59  Aligned_cols=117  Identities=19%  Similarity=0.229  Sum_probs=74.4

Q ss_pred             CCC-CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCcc-chhhhhc-CCCCCCCEEEEecCCCChhh
Q 023244            1 MEE-GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSK-DLSFLKN-LPGASERLRIFHADLSHPDG   75 (285)
Q Consensus         1 M~~-~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~Dl~d~~~   75 (285)
                      |++ +++||.|+|+ |.+|+.++..|+..|.  +|++++++.     ...+ ....+.+ .+.....+.+.. |  +.  
T Consensus         1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~-----~~~~~~~~dl~~~~~~~~~~~~i~~-~--~~--   69 (316)
T 1ldn_A            1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANE-----SKAIGDAMDFNHGKVFAPKPVDIWH-G--DY--   69 (316)
T ss_dssp             CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH-----HHHHHHHHHHHHHTTSSSSCCEEEE-C--CG--
T ss_pred             CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCc-----chHHHHHhhHHHHhhhcCCCeEEEc-C--cH--
Confidence            654 3469999999 9999999999988774  899999875     1001 0111111 111111333332 1  22  


Q ss_pred             HHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           76 FDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                        +.++++|+||-+++......... ...+..|....+.+++.+.+..+-..++.+
T Consensus        70 --~al~~aDvViia~~~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~  122 (316)
T 1ldn_A           70 --DDCRDADLVVICAGANQKPGETR-LDLVDKNIAIFRSIVESVMASGFQGLFLVA  122 (316)
T ss_dssp             --GGTTTCSEEEECCSCCCCTTTCS-GGGHHHHHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred             --HHhCCCCEEEEcCCCCCCCCCCH-HHHHHcChHHHHHHHHHHHHHCCCCEEEEe
Confidence              34678999999998766543333 356778888888999999888633344443

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=97.80  E-value=1.9e-05  Score=66.07  Aligned_cols=112  Identities=12%  Similarity=0.060  Sum_probs=71.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchh----hhhcC---CCCCCCEEEEecCCCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLS----FLKNL---PGASERLRIFHADLSH   72 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~Dl~d   72 (285)
                      |. .++||.|+|| |.+|+.++..|+..|+ +|++++++.        ++..    .+...   .....++... .   |
T Consensus         1 m~-~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~--------~~l~~~~~~l~~~~~~~~~~~~i~~t-~---d   66 (322)
T 1t2d_A            1 MA-PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVK--------NMPHGKALDTSHTNVMAYSNCKVSGS-N---T   66 (322)
T ss_dssp             -C-CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSS--------SHHHHHHHHHHTHHHHHTCCCCEEEE-C---C
T ss_pred             CC-CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCH--------HHHHHHHHHHHhhhhhcCCCcEEEEC-C---C
Confidence            44 3568999998 9999999999999998 888888876        2111    11110   0001122211 2   2


Q ss_pred             hhhHHHHhcCCCEEEEecccCCCCCCC-----hHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           73 PDGFDAAIAGCTGVLHVATPVDFEDKE-----PEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                         + +.++++|+||-+++........     . ......|+...+.+.+.+.+..+-..+|.+
T Consensus        67 ---~-~al~~aD~Vi~a~g~p~k~g~~~qe~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~  125 (322)
T 1t2d_A           67 ---Y-DDLAGADVVIVTAGFTKAPGKSDKEWNR-DDLLPLNNKIMIEIGGHIKKNCPNAFIIVV  125 (322)
T ss_dssp             ---G-GGGTTCSEEEECCSCSSCTTCCSTTCCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred             ---H-HHhCCCCEEEEeCCCCCCCCCCcccccH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEe
Confidence               3 3567999999999865432222     2 256778888888999988887633345544

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=97.78  E-value=2.4e-05  Score=65.15  Aligned_cols=109  Identities=11%  Similarity=-0.018  Sum_probs=71.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCCCCccccCccchhhh----hcCC---CCCCCEEEEecCCCChhhH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSELDPEHRNSKDLSFL----KNLP---GASERLRIFHADLSHPDGF   76 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~Dl~d~~~~   76 (285)
                      |||.|+|+ |.+|+.++..|+..  |++|+++++++        ++....    ....   ....++.. .   +|.   
T Consensus         1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~--------~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~---   64 (310)
T 1guz_A            1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVE--------GIPQGKALDMYESGPVGLFDTKVTG-S---NDY---   64 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSS--------SHHHHHHHHHHTTHHHHTCCCEEEE-E---SCG---
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHHHHHHHhHHhhhhcccCCcEEEE-C---CCH---
Confidence            47999999 99999999999885  78999999987        222211    1100   00111211 1   222   


Q ss_pred             HHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           77 DAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        77 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++ ++++|+||-+++......... ...+..|+.....+.+.+.+..+-..+|.+|
T Consensus        65 ~~-l~~aDvViiav~~p~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t  118 (310)
T 1guz_A           65 AD-TANSDIVIITAGLPRKPGMTR-EDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS  118 (310)
T ss_dssp             GG-GTTCSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred             HH-HCCCCEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence            23 678999999998644333333 3778889999999999998886344555553

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=97.77  E-value=2.3e-05  Score=66.65  Aligned_cols=75  Identities=16%  Similarity=0.036  Sum_probs=53.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh---HHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~   80 (285)
                      .+++|+|+||+|.+|..+++.+...|.+|++++++.        ++...+.++..   .   ...|..+.+.   +.+..
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~~  227 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQ--------KKLQMAEKLGA---A---AGFNYKKEDFSEATLKFT  227 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTC---S---EEEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHcCC---c---EEEecCChHHHHHHHHHh
Confidence            357899999999999999999999999999999876        44444443311   1   1245555433   33333


Q ss_pred             c--CCCEEEEeccc
Q 023244           81 A--GCTGVLHVATP   92 (285)
Q Consensus        81 ~--~~d~vih~a~~   92 (285)
                      .  ++|+||+++|.
T Consensus       228 ~~~~~d~vi~~~G~  241 (354)
T 2j8z_A          228 KGAGVNLILDCIGG  241 (354)
T ss_dssp             TTSCEEEEEESSCG
T ss_pred             cCCCceEEEECCCc
Confidence            2  48999999983

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=97.76  E-value=3.2e-05  Score=65.80  Aligned_cols=72  Identities=13%  Similarity=0.029  Sum_probs=51.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhh---HHHHh
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDG---FDAAI   80 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~---~~~~~   80 (285)
                      ++|||+||+|.+|..+++.+...|. +|++++++.        ++...+.+ +..   .   ...|..+.+.   +.++.
T Consensus       162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~--------~~~~~~~~~~g~---~---~~~d~~~~~~~~~~~~~~  227 (357)
T 2zb4_A          162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTH--------EKCILLTSELGF---D---AAINYKKDNVAEQLRESC  227 (357)
T ss_dssp             CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHTSCC---S---EEEETTTSCHHHHHHHHC
T ss_pred             cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCH--------HHHHHHHHHcCC---c---eEEecCchHHHHHHHHhc
Confidence            7999999999999999999999999 999999876        44444443 311   1   1245555432   32222


Q ss_pred             c-CCCEEEEecc
Q 023244           81 A-GCTGVLHVAT   91 (285)
Q Consensus        81 ~-~~d~vih~a~   91 (285)
                      . ++|+||+++|
T Consensus       228 ~~~~d~vi~~~G  239 (357)
T 2zb4_A          228 PAGVDVYFDNVG  239 (357)
T ss_dssp             TTCEEEEEESCC
T ss_pred             CCCCCEEEECCC
Confidence            2 4899999988

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=97.76  E-value=0.00028  Score=58.68  Aligned_cols=110  Identities=12%  Similarity=0.089  Sum_probs=75.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |||.|+|| |.+|+.++..|+..+  .++.+++.+.        ++..    .+.........+.+.. +  +.+    .
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~--------~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~----a   64 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDR--------KLAQAHAEDILHATPFAHPVWVWA-G--SYG----D   64 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHHTTGGGSCCCEEEE-C--CGG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHHHHHHHHHHHhHhhcCCeEEEE-C--CHH----H
Confidence            58999998 999999999998876  5899999875        2221    1222110012333332 2  333    4


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++++|+||..++.......... .....|+...+.+.+.+.+.++-..++.+|
T Consensus        65 ~~~aD~Vii~ag~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (310)
T 2xxj_A           65 LEGARAVVLAAGVAQRPGETRL-QLLDRNAQVFAQVVPRVLEAAPEAVLLVAT  116 (310)
T ss_dssp             GTTEEEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             hCCCCEEEECCCCCCCCCcCHH-HHHHhhHHHHHHHHHHHHHHCCCcEEEEec
Confidence            6799999999987665444443 778899999999999999887455666553

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=97.75  E-value=3.2e-05  Score=63.66  Aligned_cols=70  Identities=14%  Similarity=0.179  Sum_probs=49.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|+|.|+|+||.+|+.+++.|.+.|++|++.+|++        +....+.+.     ++     +..+   ..+.+
T Consensus         7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~-----g~-----~~~~---~~~~~   65 (286)
T 3c24_A            7 NDVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP--------EGRDRLQGM-----GI-----PLTD---GDGWI   65 (286)
T ss_dssp             CSCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH--------HHHHHHHHT-----TC-----CCCC---SSGGG
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHhc-----CC-----CcCC---HHHHh
Confidence            344457999999999999999999999999999999876        444434332     11     1122   23356


Q ss_pred             cCCCEEEEecc
Q 023244           81 AGCTGVLHVAT   91 (285)
Q Consensus        81 ~~~d~vih~a~   91 (285)
                      +++|+||-+..
T Consensus        66 ~~aDvVi~av~   76 (286)
T 3c24_A           66 DEADVVVLALP   76 (286)
T ss_dssp             GTCSEEEECSC
T ss_pred             cCCCEEEEcCC
Confidence            78999997643

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=97.74  E-value=3.8e-05  Score=64.74  Aligned_cols=74  Identities=16%  Similarity=0.081  Sum_probs=52.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHh--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI--   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~--   80 (285)
                      .+++|||+||+|.+|..+++.+...|.+|+++++++        ++...+ +++..   .   ...|..+.+..+.+.  
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~~g~---~---~~~~~~~~~~~~~~~~~  214 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGA--------EKCRFLVEELGF---D---GAIDYKNEDLAAGLKRE  214 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTCC---S---EEEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHHcCC---C---EEEECCCHHHHHHHHHh
Confidence            467999999999999999999988999999999887        555555 44421   1   123555543333322  


Q ss_pred             --cCCCEEEEecc
Q 023244           81 --AGCTGVLHVAT   91 (285)
Q Consensus        81 --~~~d~vih~a~   91 (285)
                        .++|+||++++
T Consensus       215 ~~~~~d~vi~~~g  227 (336)
T 4b7c_A          215 CPKGIDVFFDNVG  227 (336)
T ss_dssp             CTTCEEEEEESSC
T ss_pred             cCCCceEEEECCC
Confidence              24899999987

>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}

Probab=97.74  E-value=7.2e-05  Score=63.14  Aligned_cols=97  Identities=11%  Similarity=0.095  Sum_probs=57.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +++|.|.||||++|+.+++.|.++.. +++++.+..        +....+.+. +... ..  ....+.+.+   + +++
T Consensus         4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~--------~~g~~~~~~~~~~~-g~--~~~~~~~~~---~-~~~   68 (345)
T 2ozp_A            4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRR--------FAGEPVHFVHPNLR-GR--TNLKFVPPE---K-LEP   68 (345)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCST--------TTTSBGGGTCGGGT-TT--CCCBCBCGG---G-CCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECch--------hhCchhHHhCchhc-Cc--ccccccchh---H-hcC
Confidence            57899999999999999999987754 777776643        111111111 0000 00  011122222   2 368


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      +|+||.+.+...                 ...+++.+.+.|  .++|-+|+..
T Consensus        69 vDvV~~a~g~~~-----------------s~~~a~~~~~aG--~~VId~Sa~~  102 (345)
T 2ozp_A           69 ADILVLALPHGV-----------------FAREFDRYSALA--PVLVDLSADF  102 (345)
T ss_dssp             CSEEEECCCTTH-----------------HHHTHHHHHTTC--SEEEECSSTT
T ss_pred             CCEEEEcCCcHH-----------------HHHHHHHHHHCC--CEEEEcCccc
Confidence            999998876311                 234455566677  5799888854

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=97.71  E-value=0.00054  Score=57.17  Aligned_cols=114  Identities=14%  Similarity=0.059  Sum_probs=73.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhh----hcC---CCCCCCEEEEecCCCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL----KNL---PGASERLRIFHADLSH   72 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~Dl~d   72 (285)
                      |.. +|+|.|+|+ |.+|+.++..|+..|+ +|+++++++        +.....    ...   .....++... .   |
T Consensus         1 M~~-~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~--------~~~~~~~~~l~~~~~~~~~~~~i~~t-~---d   66 (317)
T 2ewd_A            1 MIE-RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAE--------GIPQGKALDITHSMVMFGSTSKVIGT-D---D   66 (317)
T ss_dssp             CCC-CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSS--------SHHHHHHHHHHHHHHHHTCCCCEEEE-S---C
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCc--------hHHHHHHHHHHhhhhhcCCCcEEEEC-C---C
Confidence            553 578999998 9999999999999998 999999976        221110    000   0001122211 2   2


Q ss_pred             hhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                         + +.++++|+||-+++.......... +....|....+.+++.+.+..+-..+|.+|-
T Consensus        67 ---~-~a~~~aDiVi~avg~p~~~g~~r~-d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN  122 (317)
T 2ewd_A           67 ---Y-ADISGSDVVIITASIPGRPKDDRS-ELLFGNARILDSVAEGVKKYCPNAFVICITN  122 (317)
T ss_dssp             ---G-GGGTTCSEEEECCCCSSCCSSCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred             ---H-HHhCCCCEEEEeCCCCCCCCCcHH-HHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence               2 346789999999987555433333 4566677778888888887763334554443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=97.67  E-value=0.00024  Score=57.68  Aligned_cols=35  Identities=17%  Similarity=0.322  Sum_probs=28.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEE-ecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~   39 (285)
                      |+||.|+||+|.+|+.+++.+.+. +.++.++ +|+.
T Consensus         7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~   43 (272)
T 4f3y_A            7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG   43 (272)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred             ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence            579999999999999999999875 5677765 5543

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.65  E-value=5.1e-05  Score=64.14  Aligned_cols=74  Identities=22%  Similarity=0.172  Sum_probs=52.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+||+|.+|..+++.+...|.+|+++++++        ++...+.++..   . .  ..|.++.+   .+.++.
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~--------~~~~~~~~~ga---~-~--~~d~~~~~~~~~~~~~~  231 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSE--------DKLRRAKALGA---D-E--TVNYTHPDWPKEVRRLT  231 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHTC---S-E--EEETTSTTHHHHHHHHT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhcCC---C-E--EEcCCcccHHHHHHHHh
Confidence            457899999999999999999999999999999976        44444443311   1 1  23555543   343433


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  ++|+||++++
T Consensus       232 ~~~~~d~vi~~~g  244 (343)
T 2eih_A          232 GGKGADKVVDHTG  244 (343)
T ss_dssp             TTTCEEEEEESSC
T ss_pred             CCCCceEEEECCC
Confidence            2  5899999998

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=97.64  E-value=0.00017  Score=63.14  Aligned_cols=79  Identities=11%  Similarity=0.106  Sum_probs=50.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEE-EE-----ecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLR-IF-----HADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~-----~~Dl~d~~~~~   77 (285)
                      |+|.|+|+ |++|..++..|++.|++|++++|++        ++...+.+-..  ..+.+. .+     .+.+.-..++.
T Consensus         3 mkI~VIG~-G~vG~~lA~~La~~G~~V~~~D~~~--------~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~   73 (450)
T 3gg2_A            3 LDIAVVGI-GYVGLVSATCFAELGANVRCIDTDR--------NKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIE   73 (450)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCCEEEEEECCH--------HHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHH
Confidence            68999987 9999999999999999999999987        44444333100  000000 00     01111123466


Q ss_pred             HHhcCCCEEEEecccC
Q 023244           78 AAIAGCTGVLHVATPV   93 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~   93 (285)
                      ++++++|+||-+....
T Consensus        74 ea~~~aDvViiaVptp   89 (450)
T 3gg2_A           74 QAVPEADIIFIAVGTP   89 (450)
T ss_dssp             HHGGGCSEEEECCCCC
T ss_pred             HHHhcCCEEEEEcCCC
Confidence            6678899999887654

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=97.64  E-value=0.00054  Score=57.18  Aligned_cols=113  Identities=12%  Similarity=0.140  Sum_probs=71.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh--h--hhcCCCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS--F--LKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      ++|+|.|+|+ |.+|+.++..|+..|+  +|++++|+.        +...  .  +...........+...  ++.+   
T Consensus         6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~--------~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~---   71 (319)
T 1lld_A            6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK--------ERVEAEVLDMQHGSSFYPTVSIDGS--DDPE---   71 (319)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHHHTGGGSTTCEEEEE--SCGG---
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCh--------hHHHHHHHHHHhhhhhcCCeEEEeC--CCHH---
Confidence            4579999998 9999999999999998  999999975        2211  1  1111000011222211  1222   


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                       .++++|+||-+++......... ......|....+.+++.+++.+ ...+|...+
T Consensus        72 -~~~~aD~Vii~v~~~~~~g~~r-~~~~~~n~~~~~~~~~~i~~~~-~~~~vi~~~  124 (319)
T 1lld_A           72 -ICRDADMVVITAGPRQKPGQSR-LELVGATVNILKAIMPNLVKVA-PNAIYMLIT  124 (319)
T ss_dssp             -GGTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred             -HhCCCCEEEECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhC-CCceEEEec
Confidence             3568999999987654433344 3778888888888888888765 333443333

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.64  E-value=0.00013  Score=61.22  Aligned_cols=112  Identities=12%  Similarity=0.015  Sum_probs=70.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccc-hhhhhcCC---CCCCCEEEEecCCCChhhHHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKD-LSFLKNLP---GASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ++||.|+|| |.+|+.++..|+..|+ +|++++++..     ..+. ...+....   ....++... .|      + +.
T Consensus        14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~-----~l~~~~~~l~~~~~~~~~~~~i~~t-~d------~-~a   79 (328)
T 2hjr_A           14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEG-----VPQGKALDLNHCMALIGSPAKIFGE-NN------Y-EY   79 (328)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTT-----HHHHHHHHHHHHHHHHTCCCCEEEE-SC------G-GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHH-----HHHHHHHHHHhHhhccCCCCEEEEC-CC------H-HH
Confidence            468999998 9999999999999998 9999999761     1110 00111100   001123321 22      2 35


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      ++++|+||-.++.......... .....|....+.+++.+.+..+-..++.+
T Consensus        80 l~~aD~VI~avg~p~k~g~tr~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~  130 (328)
T 2hjr_A           80 LQNSDVVIITAGVPRKPNMTRS-DLLTVNAKIVGSVAENVGKYCPNAFVICI  130 (328)
T ss_dssp             GTTCSEEEECCSCCCCTTCCSG-GGHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HCCCCEEEEcCCCCCCCCCchh-hHHhhhHHHHHHHHHHHHHHCCCeEEEEe
Confidence            6789999999976543222222 55677888888899988887633344444

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=97.62  E-value=4.7e-05  Score=64.20  Aligned_cols=69  Identities=12%  Similarity=0.074  Sum_probs=58.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      ++++|+|+ |.+|+.++++|.++|+ |+++++++        +... +.+.     ++.++.+|.+|++.++++ ++++|
T Consensus       116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~--------~~~~-~~~~-----~~~~i~gd~~~~~~L~~a~i~~a~  179 (336)
T 1lnq_A          116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDEN--------VRKK-VLRS-----GANFVHGDPTRVSDLEKANVRGAR  179 (336)
T ss_dssp             CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGG--------GHHH-HHHT-----TCEEEESCTTSHHHHHHTCSTTEE
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCCh--------hhhh-HHhC-----CcEEEEeCCCCHHHHHhcChhhcc
Confidence            57999997 9999999999999999 99999887        4444 4432     688999999999999987 77899


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      .|+-+.
T Consensus       180 ~vi~~~  185 (336)
T 1lnq_A          180 AVIVDL  185 (336)
T ss_dssp             EEEECC
T ss_pred             EEEEcC
Confidence            988654

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.59  E-value=0.00013  Score=57.30  Aligned_cols=67  Identities=19%  Similarity=0.190  Sum_probs=48.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|.|+| +|.+|+.+++.|.+.|++|++.+|+.        +....+.+.     ++...        ++.+.++++
T Consensus        27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~--------~~~~~~~~~-----g~~~~--------~~~~~~~~~   84 (215)
T 2vns_A           27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNP--------KRTARLFPS-----AAQVT--------FQEEAVSSP   84 (215)
T ss_dssp             --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSH--------HHHHHHSBT-----TSEEE--------EHHHHTTSC
T ss_pred             CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCcee--------cHHHHHhCC
Confidence            347899999 69999999999999999999999976        333333222     22221        355677889


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+||.+...
T Consensus        85 DvVi~av~~   93 (215)
T 2vns_A           85 EVIFVAVFR   93 (215)
T ss_dssp             SEEEECSCG
T ss_pred             CEEEECCCh
Confidence            999987653

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=97.57  E-value=0.00079  Score=56.20  Aligned_cols=108  Identities=16%  Similarity=0.114  Sum_probs=71.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhh----hc-CCCCCCCEEEEecCCCChhhHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFL----KN-LPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+|.|+|+ |.+|+.++..|+..|+  +|+++++++        +....+    .. .+ ......+..   +|.+    
T Consensus         1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~--------~~~~~~~~~l~~~~~-~~~~~~i~~---~d~~----   63 (319)
T 1a5z_A            1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDK--------KRAEGDALDLIHGTP-FTRRANIYA---GDYA----   63 (319)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHGG-GSCCCEEEE---CCGG----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCCh--------HHHHHHHHHHHhhhh-hcCCcEEEe---CCHH----
Confidence            47999999 9999999999999998  999999976        222111    10 00 001122221   2332    


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      .++++|+||-+++.......... .....|+...+.+++.+.+..+-..+|.+
T Consensus        64 ~~~~aDvViiav~~~~~~g~~r~-dl~~~n~~i~~~i~~~i~~~~~~~~ii~~  115 (319)
T 1a5z_A           64 DLKGSDVVIVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYAPDSIVIVV  115 (319)
T ss_dssp             GGTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred             HhCCCCEEEEccCCCCCCCCCHH-HHHHHHHHHHHHHHHHHHhhCCCeEEEEe
Confidence            35789999999886554333343 67788899999999999887633345544

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.57  E-value=5.5e-05  Score=61.76  Aligned_cols=75  Identities=15%  Similarity=0.146  Sum_probs=50.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+++|+|+ |.+|+.++..|++.|.+|++.+|+.        ++...+. ..... ..+.  ..|+   +++.+  .+
T Consensus       118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~--------~~~~~la~~~~~~-~~~~--~~~~---~~~~~--~~  180 (271)
T 1nyt_A          118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV--------SRAEELAKLFAHT-GSIQ--ALSM---DELEG--HE  180 (271)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHHHTGGG-SSEE--ECCS---GGGTT--CC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHhhcc-CCee--EecH---HHhcc--CC
Confidence            4689999999 7899999999999999999999986        3333322 22110 1221  1232   22222  57


Q ss_pred             CCEEEEecccCCC
Q 023244           83 CTGVLHVATPVDF   95 (285)
Q Consensus        83 ~d~vih~a~~~~~   95 (285)
                      +|+||++++....
T Consensus       181 ~DivVn~t~~~~~  193 (271)
T 1nyt_A          181 FDLIINATSSGIS  193 (271)
T ss_dssp             CSEEEECCSCGGG
T ss_pred             CCEEEECCCCCCC
Confidence            9999999986543

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.57  E-value=7e-05  Score=63.58  Aligned_cols=75  Identities=21%  Similarity=0.169  Sum_probs=52.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+||+|.+|..+++.+...|.+|+++++++        ++...++++..   . ..  .|..+.+   .+.++.
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~lGa---~-~~--~~~~~~~~~~~~~~~~  232 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGST--------GKCEACERLGA---K-RG--INYRSEDFAAVIKAET  232 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHTC---S-EE--EETTTSCHHHHHHHHH
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhcCC---C-EE--EeCCchHHHHHHHHHh
Confidence            457999999999999999999999999999999887        55555554421   1 11  3444433   233322


Q ss_pred             -cCCCEEEEeccc
Q 023244           81 -AGCTGVLHVATP   92 (285)
Q Consensus        81 -~~~d~vih~a~~   92 (285)
                       .++|+||++++.
T Consensus       233 ~~g~Dvvid~~g~  245 (353)
T 4dup_A          233 GQGVDIILDMIGA  245 (353)
T ss_dssp             SSCEEEEEESCCG
T ss_pred             CCCceEEEECCCH
Confidence             258999999883

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.56  E-value=0.00035  Score=59.16  Aligned_cols=96  Identities=17%  Similarity=0.252  Sum_probs=63.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHhc-
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAIA-   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~~-   81 (285)
                      ++++|+||+|.+|...++.+...|.+|++++++.        ++...+.++..   . ..  .|..+.+   .+.++.. 
T Consensus       166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~--------~~~~~~~~~Ga---~-~~--~~~~~~~~~~~v~~~~~~  231 (349)
T 3pi7_A          166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRD--------EQIALLKDIGA---A-HV--LNEKAPDFEATLREVMKA  231 (349)
T ss_dssp             SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCG--------GGHHHHHHHTC---S-EE--EETTSTTHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---C-EE--EECCcHHHHHHHHHHhcC
Confidence            6899999999999999998888899999999877        45555554421   1 12  2443332   3333332 


Q ss_pred             -CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           82 -GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        82 -~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                       ++|+||++++.          ..       ....++.++..   .++|.+++..
T Consensus       232 ~g~D~vid~~g~----------~~-------~~~~~~~l~~~---G~iv~~G~~~  266 (349)
T 3pi7_A          232 EQPRIFLDAVTG----------PL-------ASAIFNAMPKR---ARWIIYGRLD  266 (349)
T ss_dssp             HCCCEEEESSCH----------HH-------HHHHHHHSCTT---CEEEECCCSC
T ss_pred             CCCcEEEECCCC----------hh-------HHHHHhhhcCC---CEEEEEeccC
Confidence             69999999872          11       12334444443   5899887643

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.56  E-value=9.4e-05  Score=61.31  Aligned_cols=74  Identities=16%  Similarity=0.098  Sum_probs=52.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|+|+||+|.+|..+++.+...|.+|+++++++        ++...+.++.     ... ..|..+.+++.+.+.++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~g-----a~~-~~~~~~~~~~~~~~~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP--------EKLALPLALG-----AEE-AATYAEVPERAKAWGGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG--------GGSHHHHHTT-----CSE-EEEGGGHHHHHHHTTSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHhcC-----CCE-EEECCcchhHHHHhcCc
Confidence            467899999999999999999988999999999977        4444444442     111 13444412333334779


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+||+ ++.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 773

>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A

Probab=97.55  E-value=0.00014  Score=61.56  Aligned_cols=26  Identities=27%  Similarity=0.312  Sum_probs=23.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY   30 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~   30 (285)
                      +++|.|.||||++|+.|++.|.++++
T Consensus         2 ~~kVaIvGATG~vG~eLlrlL~~~~~   27 (366)
T 3pwk_A            2 GYTVAVVGATGAVGAQMIKMLEESTL   27 (366)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHTCCC
T ss_pred             CcEEEEECCCChHHHHHHHHHhcCCC
Confidence            47999999999999999999988765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.52  E-value=5.9e-05  Score=64.22  Aligned_cols=76  Identities=21%  Similarity=0.294  Sum_probs=54.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      .++|+|+|+ |.+|+.+++.|...|.+|++++|++        ++...+.+...  ..+..   +..+.+.+.+.+.++|
T Consensus       167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~--------~r~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~D  232 (361)
T 1pjc_A          167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV--------ERLSYLETLFG--SRVEL---LYSNSAEIETAVAEAD  232 (361)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHG--GGSEE---EECCHHHHHHHHHTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHhhC--ceeEe---eeCCHHHHHHHHcCCC
Confidence            479999999 9999999999999999999999987        44444332210  01111   1224456777778999


Q ss_pred             EEEEecccCC
Q 023244           85 GVLHVATPVD   94 (285)
Q Consensus        85 ~vih~a~~~~   94 (285)
                      +||++.+...
T Consensus       233 vVI~~~~~~~  242 (361)
T 1pjc_A          233 LLIGAVLVPG  242 (361)
T ss_dssp             EEEECCCCTT
T ss_pred             EEEECCCcCC
Confidence            9999987543

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.51  E-value=0.00019  Score=60.41  Aligned_cols=75  Identities=13%  Similarity=0.081  Sum_probs=53.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+||+|.+|...++.+...|.+|++++++.        ++....+++..   ..   ..|..+.+   .+.++.
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga---~~---~~~~~~~~~~~~~~~~~  213 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD--------EKLKIAKEYGA---EY---LINASKEDILRQVLKFT  213 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---SE---EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---cE---EEeCCCchHHHHHHHHh
Confidence            467899999999999999999988999999999976        55555555421   11   13444433   333333


Q ss_pred             c--CCCEEEEeccc
Q 023244           81 A--GCTGVLHVATP   92 (285)
Q Consensus        81 ~--~~d~vih~a~~   92 (285)
                      .  ++|+||++++.
T Consensus       214 ~~~g~D~vid~~g~  227 (334)
T 3qwb_A          214 NGKGVDASFDSVGK  227 (334)
T ss_dssp             TTSCEEEEEECCGG
T ss_pred             CCCCceEEEECCCh
Confidence            2  48999999883

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.51  E-value=0.00039  Score=55.88  Aligned_cols=109  Identities=17%  Similarity=0.120  Sum_probs=66.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCc--ccc---------Cccchhh----hhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP--EHR---------NSKDLSF----LKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~~---------~~~~~~~----~~~~~~~~~~~~~~~~   68 (285)
                      +++|+|.|+ |.+|+++++.|+..|. ++++++++....  ...         ...+...    +... ...-++..+..
T Consensus        31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~~  108 (249)
T 1jw9_B           31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI-NPHIAITPVNA  108 (249)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECS
T ss_pred             CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH-CCCcEEEEEec
Confidence            468999998 8999999999999996 888888875110  000         0011111    2111 11224556666


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      ++++ +.+.++++++|+||.+..       +..         .-..+.+++++.+  ..+|+.+..
T Consensus       109 ~~~~-~~~~~~~~~~DvVi~~~d-------~~~---------~~~~l~~~~~~~~--~p~i~~~~~  155 (249)
T 1jw9_B          109 LLDD-AELAALIAEHDLVLDCTD-------NVA---------VRNQLNAGCFAAK--VPLVSGAAI  155 (249)
T ss_dssp             CCCH-HHHHHHHHTSSEEEECCS-------SHH---------HHHHHHHHHHHHT--CCEEEEEEE
T ss_pred             cCCH-hHHHHHHhCCCEEEEeCC-------CHH---------HHHHHHHHHHHcC--CCEEEeeec
Confidence            6653 556778889999998643       111         1134556677766  467765543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.50  E-value=3.1e-05  Score=56.79  Aligned_cols=70  Identities=14%  Similarity=0.202  Sum_probs=50.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +++|+|+|+ |.+|+.+++.|.+.|++|++.+|+.        ++...+. ..     +....     ..+++.+.++++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~--------~~~~~~a~~~-----~~~~~-----~~~~~~~~~~~~   81 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNI--------DHVRAFAEKY-----EYEYV-----LINDIDSLIKNN   81 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCH--------HHHHHHHHHH-----TCEEE-----ECSCHHHHHHTC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCH--------HHHHHHHHHh-----CCceE-----eecCHHHHhcCC
Confidence            579999997 9999999999999999988999986        3333322 22     11111     223466677899


Q ss_pred             CEEEEecccC
Q 023244           84 TGVLHVATPV   93 (285)
Q Consensus        84 d~vih~a~~~   93 (285)
                      |+||.+.+..
T Consensus        82 Divi~at~~~   91 (144)
T 3oj0_A           82 DVIITATSSK   91 (144)
T ss_dssp             SEEEECSCCS
T ss_pred             CEEEEeCCCC
Confidence            9999987754

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.48  E-value=0.00015  Score=61.28  Aligned_cols=75  Identities=13%  Similarity=0.126  Sum_probs=53.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh---HHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~   79 (285)
                      .+++|||+||+|.+|..+++.+... |.+|+++++++        ++...++++..   ..   ..|..+.+.   +.++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~--------~~~~~~~~~g~---~~---~~~~~~~~~~~~~~~~  235 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE--------EAVEAAKRAGA---DY---VINASMQDPLAEIRRI  235 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH--------HHHHHHHHHTC---SE---EEETTTSCHHHHHHHH
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCH--------HHHHHHHHhCC---CE---EecCCCccHHHHHHHH
Confidence            4578999999999999999999988 99999999876        44444444311   11   134444333   4554


Q ss_pred             hc--CCCEEEEeccc
Q 023244           80 IA--GCTGVLHVATP   92 (285)
Q Consensus        80 ~~--~~d~vih~a~~   92 (285)
                      ..  ++|+||++++.
T Consensus       236 ~~~~~~d~vi~~~g~  250 (347)
T 1jvb_A          236 TESKGVDAVIDLNNS  250 (347)
T ss_dssp             TTTSCEEEEEESCCC
T ss_pred             hcCCCceEEEECCCC
Confidence            43  58999999883

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.47  E-value=8.8e-05  Score=61.55  Aligned_cols=83  Identities=12%  Similarity=0.071  Sum_probs=53.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++|+|+ |.+|+.++..|.+.|. +|++..|+.     ...++...+.+ +.. .........++.+.+.+.+.+.
T Consensus       147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~-----~~~~~a~~la~~~~~-~~~~~v~~~~~~~l~~~~~~l~  219 (312)
T 3t4e_A          147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKD-----DFFEKAVAFAKRVNE-NTDCVVTVTDLADQHAFTEALA  219 (312)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS-----THHHHHHHHHHHHHH-HSSCEEEEEETTCHHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCC-----chHHHHHHHHHHhhh-ccCcceEEechHhhhhhHhhcc
Confidence            4689999998 8999999999999997 899999984     10122222221 100 0012223345555444566677


Q ss_pred             CCCEEEEecccC
Q 023244           82 GCTGVLHVATPV   93 (285)
Q Consensus        82 ~~d~vih~a~~~   93 (285)
                      ++|+|||+-...
T Consensus       220 ~~DiIINaTp~G  231 (312)
T 3t4e_A          220 SADILTNGTKVG  231 (312)
T ss_dssp             HCSEEEECSSTT
T ss_pred             CceEEEECCcCC
Confidence            899999987654

>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}

Probab=97.47  E-value=0.00049  Score=58.34  Aligned_cols=34  Identities=32%  Similarity=0.441  Sum_probs=28.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (285)
                      +++|.|.||||++|+.+++.|.+++ .+|+++.++
T Consensus         8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s   42 (354)
T 1ys4_A            8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS   42 (354)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred             cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence            3689999999999999999998764 588888754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=97.46  E-value=0.00047  Score=60.23  Aligned_cols=79  Identities=15%  Similarity=0.180  Sum_probs=49.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEE-EE-----ecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLR-IF-----HADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~-----~~Dl~d~~~~~   77 (285)
                      |+|.|.|+ |++|..++..|++.|++|++++|++        ++...+.+-..  ..+... .+     .+.+.-..++.
T Consensus         1 mkI~VIG~-G~vG~~~A~~la~~G~~V~~~d~~~--------~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~   71 (436)
T 1mv8_A            1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSS--------TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (436)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHH
Confidence            47999985 9999999999999999999999976        44443332100  000000 00     01111123355


Q ss_pred             HHhcCCCEEEEecccC
Q 023244           78 AAIAGCTGVLHVATPV   93 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~   93 (285)
                      +.++++|+||-+....
T Consensus        72 ~~~~~aDvviiaVptp   87 (436)
T 1mv8_A           72 KAVLDSDVSFICVGTP   87 (436)
T ss_dssp             HHHHTCSEEEECCCCC
T ss_pred             HHhccCCEEEEEcCCC
Confidence            5677899999887643

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=97.46  E-value=0.00038  Score=59.60  Aligned_cols=69  Identities=14%  Similarity=0.199  Sum_probs=53.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|+|+|+ |.+|+.+++.+.+.|++|++++.++.       .....   .     .-.++..|..|.+.+.++++.+
T Consensus        11 ~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~-------~p~~~---~-----ad~~~~~~~~d~~~l~~~~~~~   74 (377)
T 3orq_A           11 FGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSED-------CPCRY---V-----AHEFIQAKYDDEKALNQLGQKC   74 (377)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTT-------CTTGG---G-----SSEEEECCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCC-------Chhhh---h-----CCEEEECCCCCHHHHHHHHHhC
Confidence            4679999998 89999999999999999999987651       00111   1     1135678999999999999889


Q ss_pred             CEEEE
Q 023244           84 TGVLH   88 (285)
Q Consensus        84 d~vih   88 (285)
                      |+|..
T Consensus        75 dvi~~   79 (377)
T 3orq_A           75 DVITY   79 (377)
T ss_dssp             SEEEE
T ss_pred             Cccee
Confidence            98753

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.45  E-value=0.00018  Score=61.28  Aligned_cols=98  Identities=15%  Similarity=0.103  Sum_probs=63.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+||+|.+|..+++.+...|.+|++++++.        ++...++++..   . ..  .|..+.+   .+.++.
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~--------~~~~~~~~~Ga---~-~~--~~~~~~~~~~~~~~~~  228 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSD--------EKSAFLKSLGC---D-RP--INYKTEPVGTVLKQEY  228 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S-EE--EETTTSCHHHHHHHHC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHcCC---c-EE--EecCChhHHHHHHHhc
Confidence            457999999999999999999988999999999876        45555555421   1 12  2333322   222222


Q ss_pred             -cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           81 -AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        81 -~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                       .++|+||++++.          ..       ....++.++..   .++|.+++..
T Consensus       229 ~~g~D~vid~~g~----------~~-------~~~~~~~l~~~---G~iv~~g~~~  264 (362)
T 2c0c_A          229 PEGVDVVYESVGG----------AM-------FDLAVDALATK---GRLIVIGFIS  264 (362)
T ss_dssp             TTCEEEEEECSCT----------HH-------HHHHHHHEEEE---EEEEECCCGG
T ss_pred             CCCCCEEEECCCH----------HH-------HHHHHHHHhcC---CEEEEEeCCC
Confidence             258999999872          11       12344444443   4899888754

>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1

Probab=97.44  E-value=0.00039  Score=57.82  Aligned_cols=108  Identities=12%  Similarity=0.070  Sum_probs=67.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhh-cC----CCCCCCEEEEecCCCChhhHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLK-NL----PGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |+|.|+| +|.+|+.++..|++.|  ++|++++|+.        ++...+. ++    ......+.....   |.    +
T Consensus         2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~--------~~~~~~~~~l~~~~~~~~~~~~~~~~---d~----~   65 (309)
T 1hyh_A            2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANE--------AKVKADQIDFQDAMANLEAHGNIVIN---DW----A   65 (309)
T ss_dssp             CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSH--------HHHHHHHHHHHHHGGGSSSCCEEEES---CG----G
T ss_pred             CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCH--------HHHHHHHHHHHhhhhhcCCCeEEEeC---CH----H
Confidence            6899999 5999999999999988  7999999976        2221111 10    000112333222   22    3


Q ss_pred             HhcCCCEEEEecccCCC----CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEE
Q 023244           79 AIAGCTGVLHVATPVDF----EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVY  130 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~  130 (285)
                      .++++|+||-+++....    ..... ......|+.....+++.+.+..+-..+|.
T Consensus        66 ~~~~aDvViiav~~~~~~~~~~g~~r-~~l~~~n~~i~~~i~~~i~~~~~~~~ii~  120 (309)
T 1hyh_A           66 ALADADVVISTLGNIKLQQDNPTGDR-FAELKFTSSMVQSVGTNLKESGFHGVLVV  120 (309)
T ss_dssp             GGTTCSEEEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE
T ss_pred             HhCCCCEEEEecCCcccCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCcEEEE
Confidence            45789999998876442    22222 25567788888888998887663334444

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.44  E-value=0.00017  Score=60.50  Aligned_cols=75  Identities=19%  Similarity=0.116  Sum_probs=52.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+||+|.+|..+++.+...|.+|+++++++        ++...+.++..   . .  ..|..+.+   .+.++.
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~Ga---~-~--~~~~~~~~~~~~~~~~~  205 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSP--------EKAAHAKALGA---W-E--TIDYSHEDVAKRVLELT  205 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHTC---S-E--EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---C-E--EEeCCCccHHHHHHHHh
Confidence            467999999999999999999988899999999876        45555544421   1 1  13444433   333333


Q ss_pred             c--CCCEEEEeccc
Q 023244           81 A--GCTGVLHVATP   92 (285)
Q Consensus        81 ~--~~d~vih~a~~   92 (285)
                      .  ++|+||++++.
T Consensus       206 ~~~g~Dvvid~~g~  219 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQ  219 (325)
T ss_dssp             TTCCEEEEEESSCG
T ss_pred             CCCCceEEEECCCh
Confidence            3  58999999883

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.43  E-value=0.00027  Score=59.68  Aligned_cols=76  Identities=18%  Similarity=0.156  Sum_probs=52.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~-   81 (285)
                      .+++|||+||+|.+|..+++.+...|.+|++++++.        ++...++++..   . ..+..+ .+. +.+.++.. 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~~ga---~-~v~~~~-~~~~~~v~~~~~~  225 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRT--------AATEFVKSVGA---D-IVLPLE-EGWAKAVREATGG  225 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHTC---S-EEEESS-TTHHHHHHHHTTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhcCC---c-EEecCc-hhHHHHHHHHhCC
Confidence            467899999999999999999988999999999977        45555554421   1 222233 222 23444433 


Q ss_pred             -CCCEEEEeccc
Q 023244           82 -GCTGVLHVATP   92 (285)
Q Consensus        82 -~~d~vih~a~~   92 (285)
                       ++|+||++++.
T Consensus       226 ~g~Dvvid~~g~  237 (342)
T 4eye_A          226 AGVDMVVDPIGG  237 (342)
T ss_dssp             SCEEEEEESCC-
T ss_pred             CCceEEEECCch
Confidence             48999999883

>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A

Probab=97.42  E-value=0.0028  Score=52.35  Aligned_cols=111  Identities=13%  Similarity=0.065  Sum_probs=71.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++||.|+|| |.+|+.++..|+..|.  +|.+++.+..     .......+....  ..++... .   |   + +.++
T Consensus        13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-----~~g~a~dl~~~~--~~~i~~t-~---d---~-~~l~   76 (303)
T 2i6t_A           13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-----TKGATMDLEIFN--LPNVEIS-K---D---L-SASA   76 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC----------CHHHHHHHT--CTTEEEE-S---C---G-GGGT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-----hHHHHHHHhhhc--CCCeEEe-C---C---H-HHHC
Confidence            3578999997 9999999999999888  8999998761     111111111111  1244442 2   2   2 3467


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++|+||-.++.. ...... ......|....+.+++.+.+..+-..++.+|
T Consensus        77 ~aD~Vi~aag~~-~pG~tR-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~s  125 (303)
T 2i6t_A           77 HSKVVIFTVNSL-GSSQSY-LDVVQSNVDMFRALVPALGHYSQHSVLLVAS  125 (303)
T ss_dssp             TCSEEEECCCC-----CCH-HHHHHHHHHHHHHHHHHHHHHTTTCEEEECS
T ss_pred             CCCEEEEcCCCC-CCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEcC
Confidence            999999999874 333344 3778889999999999998876334444444

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.42  E-value=0.00027  Score=59.60  Aligned_cols=74  Identities=12%  Similarity=0.073  Sum_probs=52.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+||+|.+|..+++.+...|.+|++++++.        ++...+.++..   .. .  .|..+.+   .+.++.
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~lga---~~-~--~~~~~~~~~~~~~~~~  209 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNN--------KHTEELLRLGA---AY-V--IDTSTAPLYETVMELT  209 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSS--------TTHHHHHHHTC---SE-E--EETTTSCHHHHHHHHT
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhCCC---cE-E--EeCCcccHHHHHHHHh
Confidence            467999999999999999998888899999999987        45555554421   11 1  2444433   333333


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  ++|+||+++|
T Consensus       210 ~~~g~Dvvid~~g  222 (340)
T 3gms_A          210 NGIGADAAIDSIG  222 (340)
T ss_dssp             TTSCEEEEEESSC
T ss_pred             CCCCCcEEEECCC
Confidence            2  5899999987

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.41  E-value=0.00022  Score=58.90  Aligned_cols=76  Identities=13%  Similarity=0.055  Sum_probs=53.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++|+|+ |.+|+.++..|++.|. +|++.+|+.        ++...+. ...... .      +..+.+++.+.+.
T Consensus       140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~--------~ka~~la~~~~~~~-~------~~~~~~~~~~~~~  203 (297)
T 2egg_A          140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTV--------EKAERLVREGDERR-S------AYFSLAEAETRLA  203 (297)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSH--------HHHHHHHHHSCSSS-C------CEECHHHHHHTGG
T ss_pred             CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHhhhcc-C------ceeeHHHHHhhhc
Confidence            4689999998 7899999999999997 899999986        4443333 221100 0      1122345667778


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      ++|+||++.+....
T Consensus       204 ~aDivIn~t~~~~~  217 (297)
T 2egg_A          204 EYDIIINTTSVGMH  217 (297)
T ss_dssp             GCSEEEECSCTTCS
T ss_pred             cCCEEEECCCCCCC
Confidence            89999999886543

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.40  E-value=0.00067  Score=56.01  Aligned_cols=25  Identities=24%  Similarity=0.228  Sum_probs=23.2

Q ss_pred             chhHHHHHHHHHHcCCeEEEEecCC
Q 023244           15 GFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus        15 G~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |-.|.++++.++.+|++|+.+.+..
T Consensus        65 GkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           65 GRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             cHHHHHHHHHHHHCCCEEEEEecCC
Confidence            8899999999999999999998854

>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*

Probab=97.37  E-value=0.00029  Score=59.25  Aligned_cols=94  Identities=13%  Similarity=0.091  Sum_probs=56.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC---CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG---YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +++|.|.||||++|+.+++.|.+++   .+++++....     ...+...    .  .+..+.+...|   ++    .++
T Consensus         3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~-----~~G~~~~----~--~~~~i~~~~~~---~~----~~~   64 (336)
T 2r00_A            3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASER-----SEGKTYR----F--NGKTVRVQNVE---EF----DWS   64 (336)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTT-----TTTCEEE----E--TTEEEEEEEGG---GC----CGG
T ss_pred             ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCC-----CCCCcee----e--cCceeEEecCC---hH----Hhc
Confidence            5799999999999999999998873   4667665322     0001000    1  01123332222   22    235


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ++|+||-+.+..                 .+...++.+.+.|  .++|-.|+.+
T Consensus        65 ~vDvVf~a~g~~-----------------~s~~~a~~~~~~G--~~vId~s~~~   99 (336)
T 2r00_A           65 QVHIALFSAGGE-----------------LSAKWAPIAAEAG--VVVIDNTSHF   99 (336)
T ss_dssp             GCSEEEECSCHH-----------------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred             CCCEEEECCCch-----------------HHHHHHHHHHHcC--CEEEEcCCcc
Confidence            799999876521                 1234556666777  4788888763

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=97.37  E-value=0.00012  Score=60.84  Aligned_cols=34  Identities=24%  Similarity=0.271  Sum_probs=31.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ||+|.|.|+ |.+|+.++..|++.|++|++++|++
T Consensus         3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~   36 (316)
T 2ew2_A            3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWP   36 (316)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCH
Confidence            578999997 9999999999999999999999976

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=97.35  E-value=0.0002  Score=59.44  Aligned_cols=112  Identities=17%  Similarity=0.118  Sum_probs=73.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcC---CCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNL---PGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ||.|+|| |.+|+.++..|+..+. +|.+++++....    ......+...   .....++... .|   .    +.+++
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~----~g~~~dl~~~~~~~~~~~~i~~t-~d---~----~a~~~   67 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKP----QGEALDLAHAAAELGVDIRISGS-NS---Y----EDMRG   67 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHH----HHHHHHHHHHHHHHTCCCCEEEE-SC---G----GGGTT
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhH----HHHHHHHHHhhhhcCCCeEEEEC-CC---H----HHhCC
Confidence            5899999 9999999999988787 699999876100    0001111110   0001122211 22   2    25689


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||-.++.......... .....|+...+.+++.+.+..+-..+|.+|
T Consensus        68 aD~Vi~~ag~~~k~G~~r~-dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t  116 (308)
T 2d4a_B           68 SDIVLVTAGIGRKPGMTRE-QLLEANANTMADLAEKIKAYAKDAIVVITT  116 (308)
T ss_dssp             CSEEEECCSCCCCSSCCTH-HHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             CCEEEEeCCCCCCCCCcHH-HHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence            9999999987665444443 778889999999999998876344666553

>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A

Probab=97.34  E-value=0.00015  Score=61.48  Aligned_cols=98  Identities=16%  Similarity=0.231  Sum_probs=56.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ++|.|.||||++|+.+++.|.++. .+++++.+..     ....+...  ..+.....+   ..|+.-.+  ++.++++|
T Consensus        17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~-----~~g~~~~~--~~~~~~~~v---~~dl~~~~--~~~~~~vD   84 (359)
T 1xyg_A           17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADR-----KAGQSMES--VFPHLRAQK---LPTLVSVK--DADFSTVD   84 (359)
T ss_dssp             EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCST-----TTTSCHHH--HCGGGTTSC---CCCCBCGG--GCCGGGCS
T ss_pred             cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCch-----hcCCCHHH--hCchhcCcc---cccceecc--hhHhcCCC
Confidence            589999999999999999998875 4777776543     11111111  000000111   12332222  33456799


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      +||.+.+....                 ...+..+ +.|  .++|-.|+..
T Consensus        85 vVf~atp~~~s-----------------~~~a~~~-~aG--~~VId~sa~~  115 (359)
T 1xyg_A           85 AVFCCLPHGTT-----------------QEIIKEL-PTA--LKIVDLSADF  115 (359)
T ss_dssp             EEEECCCTTTH-----------------HHHHHTS-CTT--CEEEECSSTT
T ss_pred             EEEEcCCchhH-----------------HHHHHHH-hCC--CEEEECCccc
Confidence            99988753211                 2344555 566  4788888854

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.33  E-value=0.0002  Score=58.44  Aligned_cols=69  Identities=7%  Similarity=0.070  Sum_probs=49.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+|+++|+|+ |.+|+.++..|.+.|. +|++..|+.        ++...+..      .+...     ..+++.+.+++
T Consensus       116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~--------~~a~~la~------~~~~~-----~~~~~~~~~~~  175 (277)
T 3don_A          116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTM--------SRFNNWSL------NINKI-----NLSHAESHLDE  175 (277)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCG--------GGGTTCCS------CCEEE-----CHHHHHHTGGG
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHH------hcccc-----cHhhHHHHhcC
Confidence            3578999998 8999999999999998 899999987        33322221      12211     23456666788


Q ss_pred             CCEEEEeccc
Q 023244           83 CTGVLHVATP   92 (285)
Q Consensus        83 ~d~vih~a~~   92 (285)
                      +|+||++-..
T Consensus       176 aDiVInaTp~  185 (277)
T 3don_A          176 FDIIINTTPA  185 (277)
T ss_dssp             CSEEEECCC-
T ss_pred             CCEEEECccC
Confidence            9999998654

>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}

Probab=97.32  E-value=0.00075  Score=57.07  Aligned_cols=35  Identities=23%  Similarity=0.377  Sum_probs=28.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEe
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTV   36 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~   36 (285)
                      |+ ++++|.|.||||++|+.+++.|.++. .+++++.
T Consensus         1 m~-~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~   36 (350)
T 2ep5_A            1 MA-DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS   36 (350)
T ss_dssp             -C-CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred             CC-CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence            53 35789999999999999999998764 4777775

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=97.32  E-value=0.00054  Score=59.43  Aligned_cols=120  Identities=13%  Similarity=0.072  Sum_probs=68.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEE-----E-ecCCCChhh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRI-----F-HADLSHPDG   75 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~-~~Dl~d~~~   75 (285)
                      .|.+|.|.|. ||+|..++..|++.|++|++++.++        ++...+..-..  ..+...-     + .+.++=..+
T Consensus        20 ~m~~IaViGl-GYVGLp~A~~~A~~G~~V~g~Did~--------~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~   90 (444)
T 3vtf_A           20 HMASLSVLGL-GYVGVVHAVGFALLGHRVVGYDVNP--------SIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAES   90 (444)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCH--------HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSS
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCcEEEEECCH--------HHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcC
Confidence            4678999976 9999999999999999999999876        44444432100  0000000     0 011111123


Q ss_pred             HHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           76 FDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ..+.++.+|++|-+.+........+.-.+..   ..+..+.+.++..++-.-+|+-||..
T Consensus        91 ~~~ai~~ad~~~I~VpTP~~~d~~~Dl~~v~---~a~~~I~~~l~~~~~g~lVV~eSTVp  147 (444)
T 3vtf_A           91 AEEAVAATDATFIAVGTPPAPDGSADLRYVE---AAARAVGRGIRAKGRWHLVVVKSTVP  147 (444)
T ss_dssp             HHHHHHTSSEEEECCCCCBCTTSSBCCHHHH---HHHHHHHHHHHHHCSCCEEEECSCCC
T ss_pred             HHHHHhcCCceEEEecCCCCCCCCCCcHHHH---HHHHHHHHHHhhcCCCeEEEEeCCCC
Confidence            4455667899888776543322233212322   34455666666543234566667653

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=97.31  E-value=0.00078  Score=58.48  Aligned_cols=69  Identities=14%  Similarity=0.181  Sum_probs=53.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|+|.|+ |.+|+.+++.+.+.|++|++++.++.       .....+        .-..+..|..|.+.+.++++++
T Consensus        34 ~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~-------~p~~~~--------ad~~~~~~~~d~~~l~~~a~~~   97 (419)
T 4e4t_A           34 PGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPA-------SPAGAV--------ADRHLRAAYDDEAALAELAGLC   97 (419)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTT-------CHHHHH--------SSEEECCCTTCHHHHHHHHHHC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCc-------Cchhhh--------CCEEEECCcCCHHHHHHHHhcC
Confidence            5679999998 89999999999999999999976551       111111        1135568999999999999889


Q ss_pred             CEEEE
Q 023244           84 TGVLH   88 (285)
Q Consensus        84 d~vih   88 (285)
                      |+|+.
T Consensus        98 D~V~~  102 (419)
T 4e4t_A           98 EAVST  102 (419)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            99883

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.28  E-value=0.00052  Score=58.50  Aligned_cols=74  Identities=14%  Similarity=0.091  Sum_probs=54.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+.+|||+|+ |.+|..+++.+...|.+|+++++++        ++...+. ++..   . .  ..|..+.+.+.++..+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~--------~~~~~~~~~lGa---~-~--v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSP--------SKKEEALKNFGA---D-S--FLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCG--------GGHHHHHHTSCC---S-E--EEETTCHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHhcCC---c-e--EEeccCHHHHHHhhCC
Confidence            4578999996 9999999999988899999999876        4444433 4321   1 1  2356666667666667


Q ss_pred             CCEEEEeccc
Q 023244           83 CTGVLHVATP   92 (285)
Q Consensus        83 ~d~vih~a~~   92 (285)
                      +|+||++++.
T Consensus       252 ~D~vid~~g~  261 (366)
T 1yqd_A          252 LDGIIDTVSA  261 (366)
T ss_dssp             EEEEEECCSS
T ss_pred             CCEEEECCCc
Confidence            9999999874

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.28  E-value=0.0008  Score=58.95  Aligned_cols=45  Identities=20%  Similarity=0.202  Sum_probs=37.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~   56 (285)
                      .+++|||+||+|.+|...++.+...|.+|++++++.        ++...++++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~--------~~~~~~~~l  264 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSA--------QKEAAVRAL  264 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhc
Confidence            457899999999999999999988999999999876        555555554

>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}

Probab=97.27  E-value=0.00092  Score=58.19  Aligned_cols=88  Identities=13%  Similarity=0.232  Sum_probs=57.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CC---eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC--CChhh-HH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--SHPDG-FD   77 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~-~~   77 (285)
                      +++|+|.|+ |.||+.+++.|+++ ++   +|++.+...        ......+..     ++.+...++  .|.++ +.
T Consensus        13 ~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~--------~~~~~~~~~-----g~~~~~~~Vdadnv~~~l~   78 (480)
T 2ph5_A           13 KNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEG--------TKVDVAQQY-----GVSFKLQQITPQNYLEVIG   78 (480)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSC--------CSCCHHHHH-----TCEEEECCCCTTTHHHHTG
T ss_pred             CCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccch--------hhhhHHhhc-----CCceeEEeccchhHHHHHH
Confidence            468999995 99999999999886 44   688887655        111111111     334555555  44433 55


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (285)
                      .++++.|+|||++-..     .            ...++++|.+.|
T Consensus        79 aLl~~~DvVIN~s~~~-----~------------~l~Im~acleaG  107 (480)
T 2ph5_A           79 STLEENDFLIDVSIGI-----S------------SLALIILCNQKG  107 (480)
T ss_dssp             GGCCTTCEEEECCSSS-----C------------HHHHHHHHHHHT
T ss_pred             HHhcCCCEEEECCccc-----c------------CHHHHHHHHHcC
Confidence            6777779999854321     1            136788999888

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=97.26  E-value=0.00055  Score=50.87  Aligned_cols=75  Identities=13%  Similarity=0.199  Sum_probs=50.3

Q ss_pred             CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh--hhHHHHhc------CCCE
Q 023244           14 TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP--DGFDAAIA------GCTG   85 (285)
Q Consensus        14 tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~------~~d~   85 (285)
                      +|.++...++.|++.|.+|++..|+... .....+....+...   +.++..+.+|++++  +++.++++      +-|+
T Consensus        25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e-~~~~~~~~~~~~~~---G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~dV  100 (157)
T 3gxh_A           25 SGLPNEQQFSLLKQAGVDVVINLMPDSS-KDAHPDEGKLVTQA---GMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGKDV  100 (157)
T ss_dssp             EBCCCHHHHHHHHHTTCCEEEECSCTTS-TTSCTTHHHHHHHT---TCEEEECCCCTTSCCHHHHHHHHHHHHHTTTSCE
T ss_pred             cCCCCHHHHHHHHHcCCCEEEECCCccc-ccccccHHHHHHHc---CCeEEEecCCCCCCCHHHHHHHHHHHHhcCCCCE
Confidence            3678999999999999999988876510 00000012222222   23567778999999  87777664      2399


Q ss_pred             EEEeccc
Q 023244           86 VLHVATP   92 (285)
Q Consensus        86 vih~a~~   92 (285)
                      +|||||.
T Consensus       101 LVnnAgg  107 (157)
T 3gxh_A          101 LVHCLAN  107 (157)
T ss_dssp             EEECSBS
T ss_pred             EEECCCC
Confidence            9999985

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=97.26  E-value=0.00018  Score=56.71  Aligned_cols=35  Identities=20%  Similarity=0.206  Sum_probs=31.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEE-EecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTT-TVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~   39 (285)
                      +||+|.|+| +|.+|+.+++.|++.|++|++ .+|++
T Consensus        22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~   57 (220)
T 4huj_A           22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGP   57 (220)
T ss_dssp             GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred             cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence            357999999 599999999999999999998 77776

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.26  E-value=0.00056  Score=58.04  Aligned_cols=76  Identities=12%  Similarity=0.056  Sum_probs=55.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC-------------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL-------------   70 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-------------   70 (285)
                      .+++|+|+|+ |-+|...++.|...|.+|++++|++        .+...+.++     +.+++..|.             
T Consensus       183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~--------~~l~~~~~l-----Ga~~~~l~~~~~~~~gya~~~~  248 (381)
T 3p2y_A          183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRP--------EVAEQVRSV-----GAQWLDLGIDAAGEGGYARELS  248 (381)
T ss_dssp             CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSG--------GGHHHHHHT-----TCEECCCC-------------C
T ss_pred             CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCeEEeccccccccccchhhhh
Confidence            3578999999 9999999999999999999999987        555555544     233333221             


Q ss_pred             -----CChhhHHHHhcCCCEEEEecccC
Q 023244           71 -----SHPDGFDAAIAGCTGVLHVATPV   93 (285)
Q Consensus        71 -----~d~~~~~~~~~~~d~vih~a~~~   93 (285)
                           .+.+.+.+.++++|+||.++...
T Consensus       249 ~~~~~~~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          249 EAERAQQQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEECCCCT
T ss_pred             HHHHhhhHHHHHHHHhcCCEEEECCCCC
Confidence                 12346778888999999876443

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.26  E-value=0.00041  Score=58.44  Aligned_cols=73  Identities=15%  Similarity=0.148  Sum_probs=51.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+++|||+|| |.+|..+++.+...|.+|+++++++        ++...++++.     ... ..|..+.+   .+.++.
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~--------~~~~~~~~lG-----a~~-~~d~~~~~~~~~~~~~~  228 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD--------EKLELAKELG-----ADL-VVNPLKEDAAKFMKEKV  228 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTT-----CSE-EECTTTSCHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHCC-----CCE-EecCCCccHHHHHHHHh
Confidence            4578999999 7799999999988999999999876        5555555542     111 24555432   233333


Q ss_pred             cCCCEEEEecc
Q 023244           81 AGCTGVLHVAT   91 (285)
Q Consensus        81 ~~~d~vih~a~   91 (285)
                      .++|+||++++
T Consensus       229 ~~~d~vid~~g  239 (339)
T 1rjw_A          229 GGVHAAVVTAV  239 (339)
T ss_dssp             SSEEEEEESSC
T ss_pred             CCCCEEEECCC
Confidence            46899999887

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.25  E-value=0.00034  Score=59.82  Aligned_cols=75  Identities=20%  Similarity=0.146  Sum_probs=55.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+++|+|+|+ |.+|+.+++.+...|.+|++++|++        ++...+.+ ...   .+   ..+..+.+.+.+++++
T Consensus       167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~--------~~l~~~~~~~g~---~~---~~~~~~~~~l~~~l~~  231 (377)
T 2vhw_A          167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINI--------DKLRQLDAEFCG---RI---HTRYSSAYELEGAVKR  231 (377)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHTTT---SS---EEEECCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHhcCC---ee---EeccCCHHHHHHHHcC
Confidence            4689999999 9999999999999999999999987        44333333 211   11   1233455678888889


Q ss_pred             CCEEEEecccC
Q 023244           83 CTGVLHVATPV   93 (285)
Q Consensus        83 ~d~vih~a~~~   93 (285)
                      +|+||.+++..
T Consensus       232 aDvVi~~~~~p  242 (377)
T 2vhw_A          232 ADLVIGAVLVP  242 (377)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            99999987643

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.24  E-value=0.00016  Score=59.22  Aligned_cols=78  Identities=19%  Similarity=0.260  Sum_probs=51.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++|+|+ |.+|+.++..|++.|. +|++++|+.        ++...+.+ +......+.+...++   +++.+.+.
T Consensus       126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~--------~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~  193 (283)
T 3jyo_A          126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDT--------SRAQALADVINNAVGREAVVGVDA---RGIEDVIA  193 (283)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSH--------HHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCH--------HHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHh
Confidence            4689999998 8999999999999998 799999986        33332211 110001122222333   34666777


Q ss_pred             CCCEEEEecccC
Q 023244           82 GCTGVLHVATPV   93 (285)
Q Consensus        82 ~~d~vih~a~~~   93 (285)
                      ++|+||++-...
T Consensus       194 ~~DiVInaTp~G  205 (283)
T 3jyo_A          194 AADGVVNATPMG  205 (283)
T ss_dssp             HSSEEEECSSTT
T ss_pred             cCCEEEECCCCC
Confidence            899999987643

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=97.23  E-value=0.0017  Score=55.67  Aligned_cols=69  Identities=10%  Similarity=0.092  Sum_probs=52.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|+|+|+ |.+|+.+++.+.+.|++|++++.++.       ....   ..     .-..+..|..|.+.+.++++.+
T Consensus        13 ~~k~IlIlG~-G~~g~~la~aa~~~G~~vi~~d~~~~-------~~~~---~~-----ad~~~~~~~~d~~~l~~~~~~~   76 (389)
T 3q2o_A           13 PGKTIGIIGG-GQLGRMMALAAKEMGYKIAVLDPTKN-------SPCA---QV-----ADIEIVASYDDLKAIQHLAEIS   76 (389)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTT-------CTTT---TT-----CSEEEECCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCC-------CchH---Hh-----CCceEecCcCCHHHHHHHHHhC
Confidence            4679999988 88999999999999999999987651       0000   01     1134568899999999999999


Q ss_pred             CEEEE
Q 023244           84 TGVLH   88 (285)
Q Consensus        84 d~vih   88 (285)
                      |+|..
T Consensus        77 dvI~~   81 (389)
T 3q2o_A           77 DVVTY   81 (389)
T ss_dssp             SEEEE
T ss_pred             CEeee
Confidence            98743

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=97.23  E-value=0.00081  Score=55.58  Aligned_cols=35  Identities=20%  Similarity=0.422  Sum_probs=32.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +++|.|+||.|.+|+.++..|.+.|++|++++|++
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~   55 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   55 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence            46899999889999999999999999999999876

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=97.23  E-value=0.00017  Score=61.13  Aligned_cols=38  Identities=24%  Similarity=0.213  Sum_probs=33.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |++++|+|.|.|+ |.+|+.++..|++.|++|++.+|++
T Consensus        25 m~~~~mkI~VIGa-G~mG~alA~~La~~G~~V~l~~r~~   62 (356)
T 3k96_A           25 MEPFKHPIAILGA-GSWGTALALVLARKGQKVRLWSYES   62 (356)
T ss_dssp             --CCCSCEEEECC-SHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred             ccccCCeEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence            4445679999998 9999999999999999999999986

>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A

Probab=97.22  E-value=0.00044  Score=57.94  Aligned_cols=35  Identities=17%  Similarity=0.259  Sum_probs=28.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (285)
                      .|++|.|+||||++|+.|++.|.++ ++++..+..+
T Consensus         3 ~M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~   38 (337)
T 3dr3_A            3 AMLNTLIVGASGYAGAELVTYVNRHPHMNITALTVS   38 (337)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEE
T ss_pred             CceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEec
Confidence            3579999999999999999999885 4677777543

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=97.22  E-value=0.00074  Score=56.14  Aligned_cols=66  Identities=20%  Similarity=0.206  Sum_probs=46.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|.|.|+ |.+|+.++..|++.|++|++.+|++        ++...+.+.     ++..       ..+..++++++
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~--------~~~~~l~~~-----g~~~-------~~~~~~~~~~a   78 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTL--------SKCDELVEH-----GASV-------CESPAEVIKKC   78 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSG--------GGGHHHHHT-----TCEE-------CSSHHHHHHHC
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHC-----CCeE-------cCCHHHHHHhC
Confidence            4679999986 9999999999999999999999987        444444332     1111       12345555667


Q ss_pred             CEEEEec
Q 023244           84 TGVLHVA   90 (285)
Q Consensus        84 d~vih~a   90 (285)
                      |+||-+.
T Consensus        79 Dvvi~~v   85 (310)
T 3doj_A           79 KYTIAML   85 (310)
T ss_dssp             SEEEECC
T ss_pred             CEEEEEc
Confidence            7777554

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.21  E-value=0.0004  Score=58.66  Aligned_cols=73  Identities=23%  Similarity=0.253  Sum_probs=49.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~-   81 (285)
                      .+++|||+||+|.+|..+++.+...|.+|+++ ++.        ++...++++     ....+. +-.+. +.+.++.. 
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~--------~~~~~~~~l-----Ga~~i~-~~~~~~~~~~~~~~~  214 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARG--------SDLEYVRDL-----GATPID-ASREPEDYAAEHTAG  214 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECH--------HHHHHHHHH-----TSEEEE-TTSCHHHHHHHHHTT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCH--------HHHHHHHHc-----CCCEec-cCCCHHHHHHHHhcC
Confidence            45789999999999999999998899999998 655        445555554     223322 21221 23333333 


Q ss_pred             -CCCEEEEecc
Q 023244           82 -GCTGVLHVAT   91 (285)
Q Consensus        82 -~~d~vih~a~   91 (285)
                       ++|+||++++
T Consensus       215 ~g~D~vid~~g  225 (343)
T 3gaz_A          215 QGFDLVYDTLG  225 (343)
T ss_dssp             SCEEEEEESSC
T ss_pred             CCceEEEECCC
Confidence             5899999887

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=97.19  E-value=0.0035  Score=51.12  Aligned_cols=35  Identities=26%  Similarity=0.379  Sum_probs=27.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEE-ecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~   38 (285)
                      +++||.|.||+|-+|+.+++.+.+. +.++.++ +|+
T Consensus        20 ~~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~   56 (288)
T 3ijp_A           20 GSMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRK   56 (288)
T ss_dssp             -CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCT
T ss_pred             CCeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecC
Confidence            3468999999999999999998765 6777666 454

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.19  E-value=0.0013  Score=56.20  Aligned_cols=76  Identities=17%  Similarity=0.106  Sum_probs=55.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecC---------------
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD---------------   69 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D---------------   69 (285)
                      ..+|+|+|+ |-+|...++.+...|.+|++.++++        .+...+.+.     +.+++..+               
T Consensus       190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~--------~~l~~~~~~-----G~~~~~~~~~~~~d~~~~~~ya~  255 (405)
T 4dio_A          190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRP--------AAKEQVASL-----GAKFIAVEDEEFKAAETAGGYAK  255 (405)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSST--------THHHHHHHT-----TCEECCCCC--------------
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHc-----CCceeecccccccccccccchhh
Confidence            568999999 9999999999999999999999987        444444443     22232222               


Q ss_pred             -CCC------hhhHHHHhcCCCEEEEecccCC
Q 023244           70 -LSH------PDGFDAAIAGCTGVLHVATPVD   94 (285)
Q Consensus        70 -l~d------~~~~~~~~~~~d~vih~a~~~~   94 (285)
                       +++      .+.+.+.++++|+||.++....
T Consensus       256 e~s~~~~~~~~~~l~e~l~~aDVVI~tvlipg  287 (405)
T 4dio_A          256 EMSGEYQVKQAALVAEHIAKQDIVITTALIPG  287 (405)
T ss_dssp             ---CHHHHHHHHHHHHHHHTCSEEEECCCCSS
T ss_pred             hcchhhhhhhHhHHHHHhcCCCEEEECCcCCC
Confidence             222      2468888889999999876543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=97.19  E-value=0.00071  Score=55.87  Aligned_cols=65  Identities=12%  Similarity=0.046  Sum_probs=46.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|.|+|. |.+|+.++..|++.|++|++.+|++        ++...+.+.     ++..       ..++.++++ +|
T Consensus        15 ~~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~--------~~~~~~~~~-----g~~~-------~~~~~~~~~-aD   72 (296)
T 3qha_A           15 QLKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRI--------EAMTPLAEA-----GATL-------ADSVADVAA-AD   72 (296)
T ss_dssp             CCCEEEECC-STTHHHHHHHHTTSTTCEEEECSST--------TTSHHHHHT-----TCEE-------CSSHHHHTT-SS
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHC-----CCEE-------cCCHHHHHh-CC
Confidence            468999986 9999999999999999999999988        344433332     2211       234566667 88


Q ss_pred             EEEEecc
Q 023244           85 GVLHVAT   91 (285)
Q Consensus        85 ~vih~a~   91 (285)
                      +||-+..
T Consensus        73 vvi~~vp   79 (296)
T 3qha_A           73 LIHITVL   79 (296)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            8886543

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=97.15  E-value=0.00063  Score=56.37  Aligned_cols=35  Identities=17%  Similarity=0.007  Sum_probs=31.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++|+|.|+|+ |.+|+.++..|++.|++|++.+|++
T Consensus         6 ~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~   40 (303)
T 3g0o_A            6 TDFHVGIVGL-GSMGMGAARSCLRAGLSTWGADLNP   40 (303)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence            4578999986 9999999999999999999999987

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.14  E-value=0.002  Score=52.76  Aligned_cols=109  Identities=13%  Similarity=0.158  Sum_probs=66.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCc--cc----c----Cccch----hhhhcCCCCCCCEEEEecC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDP--EH----R----NSKDL----SFLKNLPGASERLRIFHAD   69 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~--~~----~----~~~~~----~~~~~~~~~~~~~~~~~~D   69 (285)
                      .++|+|.|+ |.+|+++++.|+..|. ++++++++....  ..    .    ...+.    ..+.++ +..-+++.+..+
T Consensus        36 ~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i-NP~v~v~~~~~~  113 (292)
T 3h8v_A           36 TFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI-NPDVLFEVHNYN  113 (292)
T ss_dssp             GCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-CTTSEEEEECCC
T ss_pred             CCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-CCCcEEEEeccc
Confidence            468999998 9999999999999985 788888654100  00    0    00111    111111 122356667778


Q ss_pred             CCChhhHHHHh-----------cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           70 LSHPDGFDAAI-----------AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        70 l~d~~~~~~~~-----------~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      +++.+.+.+++           +++|+||.+.-       +.         ..-..+.++|.+.+  +.+|+.+.
T Consensus       114 l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D-------n~---------~~R~~in~~c~~~~--~Pli~~gv  170 (292)
T 3h8v_A          114 ITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD-------NF---------EARMTINTACNELG--QTWMESGV  170 (292)
T ss_dssp             TTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS-------SH---------HHHHHHHHHHHHHT--CCEEEEEE
T ss_pred             CCcHHHHHHHhhhhcccccccCCCCCEEEECCc-------ch---------hhhhHHHHHHHHhC--CCEEEeee
Confidence            87766666655           57899996532       21         11234566777777  57776654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.13  E-value=0.0013  Score=56.28  Aligned_cols=73  Identities=14%  Similarity=0.120  Sum_probs=49.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh--c
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI--A   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~   81 (285)
                      .+++|+|+||+|.+|..+++.+...|.+|+++++ +        ++...++++..   . .  ..|..+.+..+++.  .
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~--------~~~~~~~~lGa---~-~--v~~~~~~~~~~~~~~~~  247 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-Q--------DASELVRKLGA---D-D--VIDYKSGSVEEQLKSLK  247 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-G--------GGHHHHHHTTC---S-E--EEETTSSCHHHHHHTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-h--------HHHHHHHHcCC---C-E--EEECCchHHHHHHhhcC
Confidence            4578999999999999999988888999998874 3        33444444421   1 1  12444433333333  3


Q ss_pred             CCCEEEEecc
Q 023244           82 GCTGVLHVAT   91 (285)
Q Consensus        82 ~~d~vih~a~   91 (285)
                      ++|+||++++
T Consensus       248 g~D~vid~~g  257 (375)
T 2vn8_A          248 PFDFILDNVG  257 (375)
T ss_dssp             CBSEEEESSC
T ss_pred             CCCEEEECCC
Confidence            5899999987

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.13  E-value=0.0054  Score=49.21  Aligned_cols=109  Identities=15%  Similarity=0.208  Sum_probs=64.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCcc-------cc----Cccchhh----hhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPE-------HR----NSKDLSF----LKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~-------~~----~~~~~~~----~~~~~~~~~~~~~~~~   68 (285)
                      .++|+|.|+ |.+|+++++.|+..|. ++++++++.....       +.    ...+...    +.+. ...-+++.+..
T Consensus        28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~-np~~~v~~~~~  105 (251)
T 1zud_1           28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQL-NPDIQLTALQQ  105 (251)
T ss_dssp             TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHH-CTTSEEEEECS
T ss_pred             cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHH-CCCCEEEEEec
Confidence            468999999 7799999999999996 7788876531100       00    0011111    1111 11224555555


Q ss_pred             CCCChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccc
Q 023244           69 DLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSN  134 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~  134 (285)
                      ++++ +.+.++++++|+||.+..       +..         .-..+.+++.+.+  ..+|+.+..
T Consensus       106 ~~~~-~~~~~~~~~~DvVi~~~d-------~~~---------~r~~l~~~~~~~~--~p~i~~~~~  152 (251)
T 1zud_1          106 RLTG-EALKDAVARADVVLDCTD-------NMA---------TRQEINAACVALN--TPLITASAV  152 (251)
T ss_dssp             CCCH-HHHHHHHHHCSEEEECCS-------SHH---------HHHHHHHHHHHTT--CCEEEEEEE
T ss_pred             cCCH-HHHHHHHhcCCEEEECCC-------CHH---------HHHHHHHHHHHhC--CCEEEEecc
Confidence            5543 567778889999998632       111         1124556666666  567776654

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.11  E-value=0.0016  Score=52.84  Aligned_cols=58  Identities=12%  Similarity=0.152  Sum_probs=48.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|+|+++.+|+.++..|++.|.+|++..+..                                  ..+.+.++++
T Consensus       159 ~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t----------------------------------~~L~~~~~~A  204 (285)
T 3p2o_A          159 EGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT----------------------------------KDLSLYTRQA  204 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SCHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc----------------------------------hhHHHHhhcC
Confidence            578999999999999999999999999999887644                                  1366778899


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||...+....
T Consensus       205 DIVI~Avg~p~~  216 (285)
T 3p2o_A          205 DLIIVAAGCVNL  216 (285)
T ss_dssp             SEEEECSSCTTC
T ss_pred             CEEEECCCCCCc
Confidence            999998885444

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.09  E-value=0.00017  Score=59.26  Aligned_cols=34  Identities=26%  Similarity=0.336  Sum_probs=31.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .++|.|.|+ |.+|+.++..|++.|++|++.+|++
T Consensus         4 ~~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~   37 (283)
T 4e12_A            4 ITNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINT   37 (283)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence            578999987 9999999999999999999999986

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.09  E-value=0.0007  Score=57.67  Aligned_cols=74  Identities=15%  Similarity=0.230  Sum_probs=49.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC--hhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~~~   82 (285)
                      +++|||+|| |.+|..+++.+...|.+|++++++.     .+.++...+.++     .+..+  | .+  .+.+.+.-.+
T Consensus       181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~-----~~~~~~~~~~~~-----ga~~v--~-~~~~~~~~~~~~~~  246 (366)
T 2cdc_A          181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRRE-----PTEVEQTVIEET-----KTNYY--N-SSNGYDKLKDSVGK  246 (366)
T ss_dssp             TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSC-----CCHHHHHHHHHH-----TCEEE--E-CTTCSHHHHHHHCC
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCc-----cchHHHHHHHHh-----CCcee--c-hHHHHHHHHHhCCC
Confidence            689999999 9999999999988899999999865     111223333333     23333  4 43  1233331246


Q ss_pred             CCEEEEeccc
Q 023244           83 CTGVLHVATP   92 (285)
Q Consensus        83 ~d~vih~a~~   92 (285)
                      +|+||++++.
T Consensus       247 ~d~vid~~g~  256 (366)
T 2cdc_A          247 FDVIIDATGA  256 (366)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            8999999873

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=97.07  E-value=0.00083  Score=55.46  Aligned_cols=68  Identities=15%  Similarity=0.124  Sum_probs=45.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+ ++|+|.|.|+ |.+|+.++..|++.|++|++.+|++        +....+.+.     ++..       ..+..+++
T Consensus         1 M~-~~~~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~--------~~~~~~~~~-----g~~~-------~~~~~~~~   58 (301)
T 3cky_A            1 ME-KSIKIGFIGL-GAMGKPMAINLLKEGVTVYAFDLME--------ANVAAVVAQ-----GAQA-------CENNQKVA   58 (301)
T ss_dssp             ----CCEEEEECC-CTTHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHTT-----TCEE-------CSSHHHHH
T ss_pred             CC-CCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHHC-----CCee-------cCCHHHHH
Confidence            55 3578999986 9999999999999999999998876        333333322     2221       12344555


Q ss_pred             cCCCEEEEec
Q 023244           81 AGCTGVLHVA   90 (285)
Q Consensus        81 ~~~d~vih~a   90 (285)
                      +++|+||-+.
T Consensus        59 ~~~D~vi~~v   68 (301)
T 3cky_A           59 AASDIIFTSL   68 (301)
T ss_dssp             HHCSEEEECC
T ss_pred             hCCCEEEEEC
Confidence            6788888764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=97.07  E-value=0.0002  Score=58.90  Aligned_cols=78  Identities=10%  Similarity=0.126  Sum_probs=49.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCC-CCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGAS-ERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+++|||++ .+|+.+++.|++.| +|++.+|+.        ++...+.+ ..... ... .+..|+.+.   .+.+.
T Consensus       127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~--------~~~~~l~~~~~~~~~~~~-~~~~d~~~~---~~~~~  192 (287)
T 1nvt_A          127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTV--------EKAEALAKEIAEKLNKKF-GEEVKFSGL---DVDLD  192 (287)
T ss_dssp             CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSH--------HHHHHHHHHHHHHHTCCH-HHHEEEECT---TCCCT
T ss_pred             CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCH--------HHHHHHHHHHhhhccccc-ceeEEEeeH---HHhhC
Confidence            46899999995 99999999999999 999999976        22222211 10000 000 011233331   23345


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      ++|+||++++....
T Consensus       193 ~~DilVn~ag~~~~  206 (287)
T 1nvt_A          193 GVDIIINATPIGMY  206 (287)
T ss_dssp             TCCEEEECSCTTCT
T ss_pred             CCCEEEECCCCCCC
Confidence            78999999987554

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=97.07  E-value=0.0032  Score=50.26  Aligned_cols=71  Identities=15%  Similarity=0.213  Sum_probs=46.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      |+|+|+|++|.+|+.+++.+.+. ++++.++....     .  +....+. .     ... +..|++.++...+.+.   
T Consensus         1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~-----~--dl~~~~~-~-----~~D-vvIDfT~p~a~~~~~~~a~   66 (245)
T 1p9l_A            1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAG-----D--PLSLLTD-G-----NTE-VVIDFTHPDVVMGNLEFLI   66 (245)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTT-----C--CTHHHHH-T-----TCC-EEEECSCTTTHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccC-----C--CHHHHhc-c-----CCc-EEEEccChHHHHHHHHHHH
Confidence            47999999999999999999865 89988766543     0  1111121 1     111 4678888876665543   


Q ss_pred             --CCCEEEEec
Q 023244           82 --GCTGVLHVA   90 (285)
Q Consensus        82 --~~d~vih~a   90 (285)
                        +.++|+-.-
T Consensus        67 ~~g~~~VigTT   77 (245)
T 1p9l_A           67 DNGIHAVVGTT   77 (245)
T ss_dssp             HTTCEEEECCC
T ss_pred             HcCCCEEEcCC
Confidence              467777443

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=97.07  E-value=0.0017  Score=55.69  Aligned_cols=74  Identities=16%  Similarity=0.072  Sum_probs=51.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC------------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS------------   71 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~------------   71 (285)
                      .+++|+|+|+ |-+|..+++.+...|.+|++.++++        .+.....++     +..++..|..            
T Consensus       171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~--------~~~~~~~~~-----Ga~~~~i~~~~~~~~~~~~~~~  236 (384)
T 1l7d_A          171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRA--------ATKEQVESL-----GGKFITVDDEAMKTAETAGGYA  236 (384)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCS--------TTHHHHHHT-----TCEECCC---------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHc-----CCeEEeecccccccccccccch
Confidence            4679999997 9999999999999999999999987        333333333     2222211111            


Q ss_pred             ----------ChhhHHHHhcCCCEEEEecc
Q 023244           72 ----------HPDGFDAAIAGCTGVLHVAT   91 (285)
Q Consensus        72 ----------d~~~~~~~~~~~d~vih~a~   91 (285)
                                +.+.+.+.++++|+||+++.
T Consensus       237 ~~~s~~~~~~~~~~l~~~~~~aDvVi~~~~  266 (384)
T 1l7d_A          237 KEMGEEFRKKQAEAVLKELVKTDIAITTAL  266 (384)
T ss_dssp             --------CCHHHHHHHHHTTCSEEEECCC
T ss_pred             hhcCHHHHhhhHHHHHHHhCCCCEEEECCc
Confidence                      12337777889999999873

>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8

Probab=97.07  E-value=0.0041  Score=45.00  Aligned_cols=35  Identities=14%  Similarity=0.294  Sum_probs=29.9

Q ss_pred             CCeEEEecCC---chhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .++|.|.|+|   |.+|..+++.|.+.|++|+.++++.
T Consensus        14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~   51 (138)
T 1y81_A           14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNY   51 (138)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCC
Confidence            5789999998   8999999999999999977666543

>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}

Probab=97.06  E-value=0.0019  Score=55.16  Aligned_cols=69  Identities=10%  Similarity=0.161  Sum_probs=52.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||+|+|+|+ |.+|+.+++.|.+.|++|++++.++.     ..  ..   ..     .-..+..|..|.+.+.++++++|
T Consensus         1 M~~Ililg~-g~~g~~~~~a~~~~G~~v~~~~~~~~-----~~--~~---~~-----~~~~~~~~~~d~~~l~~~~~~~d   64 (380)
T 3ax6_A            1 MKKIGIIGG-GQLGKMMTLEAKKMGFYVIVLDPTPR-----SP--AG---QV-----ADEQIVAGFFDSERIEDLVKGSD   64 (380)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSTT-----CT--TG---GG-----SSEEEECCTTCHHHHHHHHHTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC-----Cc--hh---hh-----CceEEECCCCCHHHHHHHHhcCC
Confidence            368999998 89999999999999999999987651     10  00   01     11345678999999998888899


Q ss_pred             EEEEe
Q 023244           85 GVLHV   89 (285)
Q Consensus        85 ~vih~   89 (285)
                      .|+..
T Consensus        65 ~v~~~   69 (380)
T 3ax6_A           65 VTTYD   69 (380)
T ss_dssp             EEEES
T ss_pred             EEEec
Confidence            98753

>3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A

Probab=97.06  E-value=0.0011  Score=55.62  Aligned_cols=32  Identities=16%  Similarity=0.204  Sum_probs=25.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC---eEEEEe
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTV   36 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~   36 (285)
                      +++|.|.||||++|+.|++.|.++.+   ++..+.
T Consensus         1 ~~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~   35 (344)
T 3tz6_A            1 GLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFA   35 (344)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCceEEEEEE
Confidence            36899999999999999999888754   455554

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=97.06  E-value=0.0017  Score=55.66  Aligned_cols=73  Identities=12%  Similarity=0.109  Sum_probs=53.9

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+.++|+|+|+|+ |.+|..+++.+.+.|++|++++..+.     .  ...   ..     .-..+..|..|.+.+.+++
T Consensus         7 m~~~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~-----~--~~~---~~-----~d~~~~~~~~d~~~l~~~~   70 (391)
T 1kjq_A            7 LRPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD-----A--PAM---HV-----AHRSHVINMLDGDALRRVV   70 (391)
T ss_dssp             TSTTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT-----C--GGG---GG-----SSEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCC-----C--chh---hh-----ccceEECCCCCHHHHHHHH
Confidence            5556789999988 78999999999999999999987651     1  000   01     1134567888888888887


Q ss_pred             c--CCCEEEEe
Q 023244           81 A--GCTGVLHV   89 (285)
Q Consensus        81 ~--~~d~vih~   89 (285)
                      +  ++|+|+..
T Consensus        71 ~~~~~d~v~~~   81 (391)
T 1kjq_A           71 ELEKPHYIVPE   81 (391)
T ss_dssp             HHHCCSEEEEC
T ss_pred             HHcCCCEEEEC
Confidence            5  68998863

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.06  E-value=0.0014  Score=54.14  Aligned_cols=70  Identities=19%  Similarity=0.221  Sum_probs=52.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|+|.|+ |.+|+.+++.|...|.+|++.+|+.        ++...+.+.     ++..+     +.+++.++++++
T Consensus       156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~--------~~~~~~~~~-----g~~~~-----~~~~l~~~l~~a  216 (300)
T 2rir_A          156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSS--------AHLARITEM-----GLVPF-----HTDELKEHVKDI  216 (300)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHT-----TCEEE-----EGGGHHHHSTTC
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHC-----CCeEE-----chhhHHHHhhCC
Confidence            4689999997 9999999999999999999999976        333333222     22222     234577888899


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+|+.+...
T Consensus       217 DvVi~~~p~  225 (300)
T 2rir_A          217 DICINTIPS  225 (300)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999998774

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=97.05  E-value=0.0014  Score=53.90  Aligned_cols=70  Identities=14%  Similarity=0.170  Sum_probs=51.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|+|.|+ |.+|+.+++.|...|.+|++.+|+.        +....+.+.     ++..+     +.+++.++++++
T Consensus       154 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~--------~~~~~~~~~-----g~~~~-----~~~~l~~~l~~a  214 (293)
T 3d4o_A          154 HGANVAVLGL-GRVGMSVARKFAALGAKVKVGARES--------DLLARIAEM-----GMEPF-----HISKAAQELRDV  214 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHT-----TSEEE-----EGGGHHHHTTTC
T ss_pred             CCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHC-----CCeec-----ChhhHHHHhcCC
Confidence            4689999996 9999999999999999999999976        333223222     22222     234677888899


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+|+.+...
T Consensus       215 DvVi~~~p~  223 (293)
T 3d4o_A          215 DVCINTIPA  223 (293)
T ss_dssp             SEEEECCSS
T ss_pred             CEEEECCCh
Confidence            999998753

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=97.05  E-value=0.00091  Score=54.92  Aligned_cols=64  Identities=20%  Similarity=0.193  Sum_probs=46.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|.|.|+ |.+|+.+++.|++.|++|++.+|++        ++...+.+.     ++..       ..++.++++++|+
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~--------~~~~~~~~~-----g~~~-------~~~~~~~~~~aDv   60 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSP--------EKAEELAAL-----GAER-------AATPCEVVESCPV   60 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSG--------GGGHHHHHT-----TCEE-------CSSHHHHHHHCSE
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCH--------HHHHHHHHC-----CCee-------cCCHHHHHhcCCE
Confidence            68999987 9999999999999999999999987        444444332     1211       2345556667888


Q ss_pred             EEEec
Q 023244           86 VLHVA   90 (285)
Q Consensus        86 vih~a   90 (285)
                      ||-+.
T Consensus        61 vi~~v   65 (287)
T 3pef_A           61 TFAML   65 (287)
T ss_dssp             EEECC
T ss_pred             EEEEc
Confidence            87654

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.04  E-value=0.00061  Score=57.61  Aligned_cols=72  Identities=17%  Similarity=0.086  Sum_probs=49.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      +.+|||+|| |.+|..+++.+...|. +|+++++++        ++...+.++.     ... ..|..+.+   .+.++.
T Consensus       168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~--------~~~~~~~~~G-----a~~-~~~~~~~~~~~~v~~~~  232 (348)
T 2d8a_A          168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSD--------FRRELAKKVG-----ADY-VINPFEEDVVKEVMDIT  232 (348)
T ss_dssp             TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCH--------HHHHHHHHHT-----CSE-EECTTTSCHHHHHHHHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCH--------HHHHHHHHhC-----CCE-EECCCCcCHHHHHHHHc
Confidence            568999999 9999999999888898 999999876        4444444431     111 13444432   233333


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  ++|+||++++
T Consensus       233 ~g~g~D~vid~~g  245 (348)
T 2d8a_A          233 DGNGVDVFLEFSG  245 (348)
T ss_dssp             TTSCEEEEEECSC
T ss_pred             CCCCCCEEEECCC
Confidence            2  5899999987

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=97.04  E-value=0.0011  Score=58.39  Aligned_cols=34  Identities=18%  Similarity=0.087  Sum_probs=31.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .|+|.|.|+ |++|..++..|++.|++|+++++++
T Consensus         8 ~~~I~VIG~-G~vG~~lA~~la~~G~~V~~~d~~~   41 (478)
T 2y0c_A            8 SMNLTIIGS-GSVGLVTGACLADIGHDVFCLDVDQ   41 (478)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CceEEEECc-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence            478999987 9999999999999999999999986

>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*

Probab=97.03  E-value=0.0054  Score=44.67  Aligned_cols=32  Identities=25%  Similarity=0.410  Sum_probs=27.6

Q ss_pred             CCeEEEecCC---chhHHHHHHHHHHcCCeEEEEe
Q 023244            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTV   36 (285)
Q Consensus         5 ~k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~   36 (285)
                      .++|.|.|+|   |.+|..+++.|.+.|++|+.+.
T Consensus        22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vn   56 (144)
T 2d59_A           22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVN   56 (144)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEEC
T ss_pred             CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEEC
Confidence            4689999999   8999999999999999865543

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=97.03  E-value=0.0014  Score=54.74  Aligned_cols=65  Identities=20%  Similarity=0.221  Sum_probs=48.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|.|+|+ |.+|+.+++.|++.|++|++.+|++        ++...+.+.     ++..       ..++.++++++|
T Consensus        31 ~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~--------~~~~~l~~~-----g~~~-------~~~~~e~~~~aD   89 (320)
T 4dll_A           31 ARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTP--------ARAASLAAL-----GATI-------HEQARAAARDAD   89 (320)
T ss_dssp             CSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHTT-----TCEE-------ESSHHHHHTTCS
T ss_pred             CCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCH--------HHHHHHHHC-----CCEe-------eCCHHHHHhcCC
Confidence            468999987 9999999999999999999999987        444444332     2211       234566777888


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      +||-+.
T Consensus        90 vVi~~v   95 (320)
T 4dll_A           90 IVVSML   95 (320)
T ss_dssp             EEEECC
T ss_pred             EEEEEC
Confidence            888654

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=97.03  E-value=0.0014  Score=54.52  Aligned_cols=34  Identities=26%  Similarity=0.377  Sum_probs=31.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|.|.|+ |.+|+.++..|.+.|++|++.+|++
T Consensus        30 ~~~I~iIG~-G~mG~~~a~~l~~~g~~V~~~~~~~   63 (316)
T 2uyy_A           30 DKKIGFLGL-GLMGSGIVSNLLKMGHTVTVWNRTA   63 (316)
T ss_dssp             SSCEEEECC-SHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred             CCeEEEEcc-cHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            478999996 9999999999999999999999987

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=97.03  E-value=0.0011  Score=56.06  Aligned_cols=34  Identities=21%  Similarity=-0.019  Sum_probs=31.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|.|.|+ |.+|+.++..|.+.|++|++++|++
T Consensus         4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~   37 (359)
T 1bg6_A            4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA   37 (359)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            478999997 9999999999999999999999976

>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*

Probab=97.02  E-value=0.0028  Score=53.64  Aligned_cols=35  Identities=14%  Similarity=0.173  Sum_probs=27.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (285)
                      ++++|.|.||||++|+.|++.|.++. .++..+..+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpl_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            34689999999999999999887764 367666543

>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*

Probab=97.02  E-value=0.0028  Score=53.64  Aligned_cols=35  Identities=14%  Similarity=0.173  Sum_probs=27.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (285)
                      ++++|.|.||||++|+.|++.|.++. .++..+..+
T Consensus         6 ~~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~   41 (359)
T 4dpk_A            6 RTLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGK   41 (359)
T ss_dssp             CCEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEES
T ss_pred             CCCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECc
Confidence            34689999999999999999887764 367666543

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=97.02  E-value=0.00067  Score=54.75  Aligned_cols=68  Identities=15%  Similarity=0.031  Sum_probs=46.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|.|.|+ |.+|+.+++.|.+.|++|.+.+|++        +....+.+..    +       +.-..++.++++++
T Consensus         2 ~~m~i~iiG~-G~mG~~~a~~l~~~g~~v~~~~~~~--------~~~~~~~~~~----g-------~~~~~~~~~~~~~~   61 (259)
T 2ahr_A            2 NAMKIGIIGV-GKMASAIIKGLKQTPHELIISGSSL--------ERSKEIAEQL----A-------LPYAMSHQDLIDQV   61 (259)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSH--------HHHHHHHHHH----T-------CCBCSSHHHHHHTC
T ss_pred             CccEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCH--------HHHHHHHHHc----C-------CEeeCCHHHHHhcC
Confidence            3578999995 9999999999999999999998876        3333332110    1       11112355566788


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||-+..
T Consensus        62 D~Vi~~v~   69 (259)
T 2ahr_A           62 DLVILGIK   69 (259)
T ss_dssp             SEEEECSC
T ss_pred             CEEEEEeC
Confidence            98887654

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=97.01  E-value=0.00061  Score=55.95  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=30.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|.|. |.+|+.++..|++.|++|++.+|++
T Consensus         2 ~~I~iiG~-G~mG~~~a~~l~~~G~~V~~~dr~~   34 (287)
T 3pdu_A            2 TTYGFLGL-GIMGGPMAANLVRAGFDVTVWNRNP   34 (287)
T ss_dssp             CCEEEECC-STTHHHHHHHHHHHTCCEEEECSSG
T ss_pred             CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence            58999985 9999999999999999999999987

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=97.01  E-value=0.00096  Score=55.04  Aligned_cols=66  Identities=17%  Similarity=0.234  Sum_probs=46.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|+|.|+|+ |.+|+.++..|.+.|++|++.+|++        +....+.+.     ++..       ..+..++++++|
T Consensus         5 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~--------~~~~~~~~~-----g~~~-------~~~~~~~~~~~D   63 (299)
T 1vpd_A            5 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNP--------EAIADVIAA-----GAET-------ASTAKAIAEQCD   63 (299)
T ss_dssp             -CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHT-----TCEE-------CSSHHHHHHHCS
T ss_pred             cceEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCH--------HHHHHHHHC-----CCee-------cCCHHHHHhCCC
Confidence            368999995 9999999999999999999999876        344333332     1211       123445566788


Q ss_pred             EEEEecc
Q 023244           85 GVLHVAT   91 (285)
Q Consensus        85 ~vih~a~   91 (285)
                      +||-+..
T Consensus        64 ~vi~~v~   70 (299)
T 1vpd_A           64 VIITMLP   70 (299)
T ss_dssp             EEEECCS
T ss_pred             EEEEECC
Confidence            8887654

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=96.97  E-value=0.0011  Score=53.20  Aligned_cols=35  Identities=26%  Similarity=0.284  Sum_probs=31.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|.|+|+ |.+|+.+++.|++.|++|++.+|++
T Consensus        18 ~~~kIgiIG~-G~mG~alA~~L~~~G~~V~~~~r~~   52 (245)
T 3dtt_A           18 QGMKIAVLGT-GTVGRTMAGALADLGHEVTIGTRDP   52 (245)
T ss_dssp             -CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCh
Confidence            4689999975 9999999999999999999999987

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=96.97  E-value=0.0003  Score=62.94  Aligned_cols=34  Identities=24%  Similarity=0.207  Sum_probs=29.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+++|||| |.+|+.++..|++.|.+|++++|+.
T Consensus       364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~  397 (523)
T 2o7s_A          364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTY  397 (523)
T ss_dssp             --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSH
T ss_pred             CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            568999999 7999999999999999999999976

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.96  E-value=0.004  Score=54.67  Aligned_cols=98  Identities=22%  Similarity=0.287  Sum_probs=70.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      -++|+|.|| |-+|..+++.| .++++|.++.++.        ++...+.+..   ++..++.+|.+|.+-+.+. ++++
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~--------~r~~~la~~l---~~~~Vi~GD~td~~~L~ee~i~~~  301 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNL--------QRAEKLSEEL---ENTIVFCGDAADQELLTEENIDQV  301 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCH--------HHHHHHHHHC---TTSEEEESCTTCHHHHHHTTGGGC
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCH--------HHHHHHHHHC---CCceEEeccccchhhHhhcCchhh
Confidence            478999998 99999999998 4568999998887        5555554321   3678899999999988775 5678


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |++|-+-+       +.     +.|+..+    -.|++.| ++++|-.-
T Consensus       302 D~~ia~T~-------~D-----e~Ni~~~----llAk~~g-v~kvIa~v  333 (461)
T 4g65_A          302 DVFIALTN-------ED-----ETNIMSA----MLAKRMG-AKKVMVLI  333 (461)
T ss_dssp             SEEEECCS-------CH-----HHHHHHH----HHHHHTT-CSEEEEEC
T ss_pred             cEEEEccc-------Cc-----HHHHHHH----HHHHHcC-Cccccccc
Confidence            99995422       11     3444443    3456778 88877443

>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*

Probab=96.96  E-value=0.0044  Score=52.55  Aligned_cols=70  Identities=16%  Similarity=0.190  Sum_probs=49.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC-CChhhHHHHhcCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL-SHPDGFDAAIAGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~~~~~~   83 (285)
                      ||+|+|+|| |..|..+++.+.+.|++|++++.++...       ..   ..     .=.++..|. .|.+.+....+++
T Consensus         1 MK~I~ilGg-g~~g~~~~~~Ak~~G~~vv~vd~~~~~~-------~~---~~-----aD~~~~~~~~~d~~~~~~~~~~~   64 (363)
T 4ffl_A            1 MKTICLVGG-KLQGFEAAYLSKKAGMKVVLVDKNPQAL-------IR---NY-----ADEFYCFDVIKEPEKLLELSKRV   64 (363)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCT-------TT---TT-----SSEEEECCTTTCHHHHHHHHTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCh-------hH---hh-----CCEEEECCCCcCHHHHHHHhcCC
Confidence            579999997 8999999999999999999998776100       00   01     113445554 4666777777789


Q ss_pred             CEEEEec
Q 023244           84 TGVLHVA   90 (285)
Q Consensus        84 d~vih~a   90 (285)
                      |+|+-..
T Consensus        65 D~v~~~~   71 (363)
T 4ffl_A           65 DAVLPVN   71 (363)
T ss_dssp             SEEEECC
T ss_pred             CEEEECC
Confidence            9887543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.94  E-value=0.0019  Score=55.64  Aligned_cols=74  Identities=15%  Similarity=0.093  Sum_probs=51.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC-------------
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-------------   71 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------   71 (285)
                      +++|+|+|+ |-+|..+++.+...|.+|+++++++        .....+.++     +..++..|..             
T Consensus       172 g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~--------~~~~~~~~l-----Ga~~~~~~~~~~~~~~~g~~~~~  237 (401)
T 1x13_A          172 PAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRP--------EVKEQVQSM-----GAEFLELDFKEEAGSGDGYAKVM  237 (401)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCG--------GGHHHHHHT-----TCEECCC--------CCHHHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHc-----CCEEEEecccccccccccchhhc
Confidence            579999997 9999999999999999999999987        444444444     2233322221             


Q ss_pred             Ch-------hhHHHHhcCCCEEEEeccc
Q 023244           72 HP-------DGFDAAIAGCTGVLHVATP   92 (285)
Q Consensus        72 d~-------~~~~~~~~~~d~vih~a~~   92 (285)
                      +.       +.+.+++.++|+||.++..
T Consensus       238 ~~~~~~~~~~~l~e~~~~aDvVI~~~~~  265 (401)
T 1x13_A          238 SDAFIKAEMELFAAQAKEVDIIVTTALI  265 (401)
T ss_dssp             SHHHHHHHHHHHHHHHHHCSEEEECCCC
T ss_pred             cHHHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            11       1366777789999998644

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=96.94  E-value=0.0028  Score=51.36  Aligned_cols=58  Identities=16%  Similarity=0.154  Sum_probs=48.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|.|+++.+|+.++..|++.|.+|++..+..                                  ..+.+.++++
T Consensus       160 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t----------------------------------~~L~~~~~~A  205 (285)
T 3l07_A          160 EGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFT----------------------------------TDLKSHTTKA  205 (285)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SSHHHHHTTC
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc----------------------------------hhHHHhcccC
Confidence            578999999999999999999999999998876543                                  1366778899


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||...+....
T Consensus       206 DIVI~Avg~p~~  217 (285)
T 3l07_A          206 DILIVAVGKPNF  217 (285)
T ss_dssp             SEEEECCCCTTC
T ss_pred             CEEEECCCCCCC
Confidence            999998875443

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.93  E-value=0.00086  Score=54.64  Aligned_cols=35  Identities=17%  Similarity=0.213  Sum_probs=32.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+++|+|+ |.+|+.++..|++.|.+|++.+|+.
T Consensus       118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~  152 (272)
T 1p77_A          118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF  152 (272)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence            4689999998 7899999999999999999999986

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=96.93  E-value=0.0028  Score=51.40  Aligned_cols=58  Identities=19%  Similarity=0.178  Sum_probs=48.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|.|+++.+|+.++..|++.|.+|+++.+..                                  ..+.+.++++
T Consensus       160 ~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T----------------------------------~~L~~~~~~A  205 (286)
T 4a5o_A          160 YGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT----------------------------------RDLADHVSRA  205 (286)
T ss_dssp             TTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SCHHHHHHTC
T ss_pred             CCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC----------------------------------cCHHHHhccC
Confidence            578999999999999999999999999999886643                                  1266778899


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||...+....
T Consensus       206 DIVI~Avg~p~~  217 (286)
T 4a5o_A          206 DLVVVAAGKPGL  217 (286)
T ss_dssp             SEEEECCCCTTC
T ss_pred             CEEEECCCCCCC
Confidence            999998875443

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.92  E-value=0.00076  Score=57.29  Aligned_cols=74  Identities=14%  Similarity=-0.001  Sum_probs=51.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~   82 (285)
                      .+.+|||+|+ |.+|..+++.+...|.+|+++++++        ++...++++..   . ..  .|..+. +..+++..+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~--------~~~~~~~~lGa---~-~v--~~~~~~~~~~~~~~~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS--------RKREDAMKMGA---D-HY--IATLEEGDWGEKYFDT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS--------TTHHHHHHHTC---S-EE--EEGGGTSCHHHHSCSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH--------HHHHHHHHcCC---C-EE--EcCcCchHHHHHhhcC
Confidence            3578999999 9999999998888899999999887        44454444311   1 11  233333 323333346


Q ss_pred             CCEEEEeccc
Q 023244           83 CTGVLHVATP   92 (285)
Q Consensus        83 ~d~vih~a~~   92 (285)
                      +|+||.+++.
T Consensus       244 ~D~vid~~g~  253 (360)
T 1piw_A          244 FDLIVVCASS  253 (360)
T ss_dssp             EEEEEECCSC
T ss_pred             CCEEEECCCC
Confidence            9999999885

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.92  E-value=0.0023  Score=51.57  Aligned_cols=58  Identities=16%  Similarity=0.203  Sum_probs=47.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|.|+++.+|+.++..|++.|.+|++..++.                                  ..+.+.++++
T Consensus       149 ~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t----------------------------------~~L~~~~~~A  194 (276)
T 3ngx_A          149 HENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT----------------------------------KDIGSMTRSS  194 (276)
T ss_dssp             CSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SCHHHHHHHS
T ss_pred             CCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc----------------------------------ccHHHhhccC
Confidence            468999999999999999999999999999886643                                  2366777889


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||...+....
T Consensus       195 DIVI~Avg~p~~  206 (276)
T 3ngx_A          195 KIVVVAVGRPGF  206 (276)
T ss_dssp             SEEEECSSCTTC
T ss_pred             CEEEECCCCCcc
Confidence            999998876443

>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2

Probab=96.91  E-value=0.00013  Score=63.96  Aligned_cols=112  Identities=14%  Similarity=0.135  Sum_probs=69.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-----CCeEEEEecCCCCccccCccchhh-------h-hcCCCCCCCEEEEecCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-----GYSVTTTVRSELDPEHRNSKDLSF-------L-KNLPGASERLRIFHADLS   71 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~Dl~   71 (285)
                      ++||.|.||.+..|..++..|+.+     +++|.+.+++.        ++...       + .... ...++..      
T Consensus        28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~--------e~~~~~~~~~~~~l~~~~-~~~~I~~------   92 (472)
T 1u8x_X           28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK--------ERQDRIAGACDVFIREKA-PDIEFAA------   92 (472)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCH--------HHHHHHHHHHHHHHHHHC-TTSEEEE------
T ss_pred             CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCH--------HHHHHHHHHHHHHhccCC-CCCEEEE------
Confidence            458999999776688888888887     67899999976        22111       1 1110 1112222      


Q ss_pred             ChhhHHHHhcCCCEEEEecccCCCCCCChH-------------------HHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           72 HPDGFDAAIAGCTGVLHVATPVDFEDKEPE-------------------EVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        72 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~-------------------~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                       ..++.+.++++|+||..++..........                   -.....|+...+.+++.+++.+ ..-++...
T Consensus        93 -t~D~~eal~~AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~-P~A~ii~~  170 (472)
T 1u8x_X           93 -TTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYS-PDAWMLNY  170 (472)
T ss_dssp             -ESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred             -ECCHHHHHcCCCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHC-CCeEEEEe
Confidence             12366677899999999976332110000                   1224567888889999999988 44444444


Q ss_pred             c
Q 023244          133 S  133 (285)
Q Consensus       133 S  133 (285)
                      |
T Consensus       171 T  171 (472)
T 1u8x_X          171 S  171 (472)
T ss_dssp             C
T ss_pred             C
Confidence            4

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=96.91  E-value=0.0032  Score=51.43  Aligned_cols=58  Identities=14%  Similarity=0.136  Sum_probs=48.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHH--HHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFD--AAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~--~~~~   81 (285)
                      .+|+++|.|+++.+|+.++..|++.|.+|+++.|..                      .            .+.  +.++
T Consensus       164 ~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T----------------------~------------~l~l~~~~~  209 (300)
T 4a26_A          164 AGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT----------------------S------------TEDMIDYLR  209 (300)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS----------------------C------------HHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC----------------------C------------Cchhhhhhc
Confidence            578999999999999999999999999999888754                      0            233  7788


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      ++|+||...+....
T Consensus       210 ~ADIVI~Avg~p~~  223 (300)
T 4a26_A          210 TADIVIAAMGQPGY  223 (300)
T ss_dssp             TCSEEEECSCCTTC
T ss_pred             cCCEEEECCCCCCC
Confidence            99999999886443

>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*

Probab=96.91  E-value=0.003  Score=54.50  Aligned_cols=69  Identities=13%  Similarity=0.130  Sum_probs=52.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +++|+|+|+ |.+|+.+++.+.+.|++|++++ .+.       .....+.+      ....+.+|..|.+.+.++++.+|
T Consensus        24 ~~~I~ilGg-G~lg~~l~~aa~~lG~~v~~~d-~~~-------~p~~~~ad------~~~~~~~~~~d~~~l~~~a~~~d   88 (403)
T 3k5i_A           24 SRKVGVLGG-GQLGRMLVESANRLNIQVNVLD-ADN-------SPAKQISA------HDGHVTGSFKEREAVRQLAKTCD   88 (403)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCEEEEEE-STT-------CTTGGGCC------SSCCEESCTTCHHHHHHHHTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE-CCC-------CcHHHhcc------ccceeecCCCCHHHHHHHHHhCC
Confidence            579999998 8999999999999999999999 541       11111111      11346789999999999999999


Q ss_pred             EEEE
Q 023244           85 GVLH   88 (285)
Q Consensus        85 ~vih   88 (285)
                      +|+-
T Consensus        89 ~i~~   92 (403)
T 3k5i_A           89 VVTA   92 (403)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8764

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=96.91  E-value=0.00063  Score=54.58  Aligned_cols=34  Identities=9%  Similarity=0.173  Sum_probs=31.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC----eEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY----SVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~   39 (285)
                      +|+|.|+|+ |.+|+.+++.|++.|+    +|++.+|++
T Consensus         2 ~~~i~iIG~-G~mG~~~a~~l~~~g~~~~~~V~~~~r~~   39 (247)
T 3gt0_A            2 DKQIGFIGC-GNMGMAMIGGMINKNIVSSNQIICSDLNT   39 (247)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred             CCeEEEECc-cHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence            468999986 9999999999999998    999999987

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=96.91  E-value=0.0018  Score=53.21  Aligned_cols=34  Identities=18%  Similarity=0.208  Sum_probs=29.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +||+|.|+|+ |.+|+.++..|.+.|++|++.+ ++
T Consensus         2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~-~~   35 (295)
T 1yb4_A            2 NAMKLGFIGL-GIMGSPMAINLARAGHQLHVTT-IG   35 (295)
T ss_dssp             --CEEEECCC-STTHHHHHHHHHHTTCEEEECC-SS
T ss_pred             CCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEEc-CH
Confidence            3578999986 9999999999999999999888 65

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=96.90  E-value=0.0019  Score=56.01  Aligned_cols=34  Identities=9%  Similarity=0.086  Sum_probs=30.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|.|.|+ |++|..++..|++ |++|+++++++
T Consensus        35 ~~mkIaVIGl-G~mG~~lA~~La~-G~~V~~~D~~~   68 (432)
T 3pid_A           35 EFMKITISGT-GYVGLSNGVLIAQ-NHEVVALDIVQ   68 (432)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHc-CCeEEEEecCH
Confidence            3579999987 9999999999987 99999999987

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=96.90  E-value=0.0015  Score=53.51  Aligned_cols=66  Identities=21%  Similarity=0.342  Sum_probs=48.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +|+|.|+|+ |.+|+.++..|++.|+   +|++.+|++        +....+.+..    ++..       ..+..+.++
T Consensus         3 ~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~--------~~~~~l~~~~----gi~~-------~~~~~~~~~   62 (280)
T 3tri_A            3 TSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSL--------DKLDFFKEKC----GVHT-------TQDNRQGAL   62 (280)
T ss_dssp             CSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSS--------HHHHHHHHTT----CCEE-------ESCHHHHHS
T ss_pred             CCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCH--------HHHHHHHHHc----CCEE-------eCChHHHHh
Confidence            578999998 9999999999999998   899999987        4444443321    2221       123556678


Q ss_pred             CCCEEEEec
Q 023244           82 GCTGVLHVA   90 (285)
Q Consensus        82 ~~d~vih~a   90 (285)
                      ++|+||-+.
T Consensus        63 ~aDvVilav   71 (280)
T 3tri_A           63 NADVVVLAV   71 (280)
T ss_dssp             SCSEEEECS
T ss_pred             cCCeEEEEe
Confidence            899999765

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.90  E-value=0.0011  Score=53.22  Aligned_cols=66  Identities=23%  Similarity=0.310  Sum_probs=48.5

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      +++|+|+ |..|+.++..|.+.|. +|++.+|+.        ++...+.+      .+...     ..+++.+.++++|+
T Consensus       110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~--------~ka~~la~------~~~~~-----~~~~~~~~~~~aDi  169 (253)
T 3u62_A          110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTI--------ERAKALDF------PVKIF-----SLDQLDEVVKKAKS  169 (253)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCH--------HHHHTCCS------SCEEE-----EGGGHHHHHHTCSE
T ss_pred             eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCH--------HHHHHHHH------HcccC-----CHHHHHhhhcCCCE
Confidence            8999998 9999999999999998 899999987        33333322      11111     22456677889999


Q ss_pred             EEEeccc
Q 023244           86 VLHVATP   92 (285)
Q Consensus        86 vih~a~~   92 (285)
                      ||++-..
T Consensus       170 VInatp~  176 (253)
T 3u62_A          170 LFNTTSV  176 (253)
T ss_dssp             EEECSST
T ss_pred             EEECCCC
Confidence            9997654

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.90  E-value=0.0011  Score=55.04  Aligned_cols=34  Identities=18%  Similarity=0.078  Sum_probs=30.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (285)
                      .+|+|.|+|. |.+|+.+++.|++.|+ +|++.+|+
T Consensus        23 ~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~   57 (312)
T 3qsg_A           23 NAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAA   57 (312)
T ss_dssp             --CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred             CCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCC
Confidence            4579999987 9999999999999999 99999996

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.88  E-value=0.0012  Score=56.22  Aligned_cols=74  Identities=19%  Similarity=0.115  Sum_probs=52.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++...++++..   . .  ..|..+.+.++++..++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~--------~~~~~a~~lGa---~-~--vi~~~~~~~~~~~~~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE--------AKREAAKALGA---D-E--VVNSRNADEMAAHLKSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHTC---S-E--EEETTCHHHHHTTTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHcCC---c-E--EeccccHHHHHHhhcCC
Confidence            3578999998 7899999988888899999999877        45555544421   1 1  13455554444444578


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+||.+++.
T Consensus       259 Dvvid~~g~  267 (369)
T 1uuf_A          259 DFILNTVAA  267 (369)
T ss_dssp             EEEEECCSS
T ss_pred             CEEEECCCC
Confidence            999999874

>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}

Probab=96.88  E-value=0.0012  Score=52.66  Aligned_cols=34  Identities=9%  Similarity=0.116  Sum_probs=28.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEE-EecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTT-TVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~   39 (285)
                      |+||.|+|+ |.+|+.+++.+.+.++++.+ ++|+.
T Consensus         3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~   37 (243)
T 3qy9_A            3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP   37 (243)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred             ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence            579999999 99999999999988667665 45544

>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A

Probab=96.86  E-value=0.0041  Score=45.07  Aligned_cols=33  Identities=21%  Similarity=0.268  Sum_probs=28.4

Q ss_pred             CCeEEEecCC---chhHHHHHHHHHHcCCeEEEEec
Q 023244            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVR   37 (285)
Q Consensus         5 ~k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r   37 (285)
                      .++|.|.|+|   |-+|..+++.|.+.|++|+.+..
T Consensus        13 p~~vaVvGas~~~g~~G~~~~~~l~~~G~~v~~vnp   48 (140)
T 1iuk_A           13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNP   48 (140)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECG
T ss_pred             CCEEEEECCCCCCCChHHHHHHHHHHCCCEEEEeCC
Confidence            4689999999   89999999999999998665544

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.86  E-value=0.0013  Score=56.72  Aligned_cols=71  Identities=18%  Similarity=0.199  Sum_probs=51.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++|+|+|+ |.+|+.+++.|...|. +|++++|+.        ++. ......     +...  .   +.+++.+++.
T Consensus       166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~--------~ra~~la~~~-----g~~~--~---~~~~l~~~l~  226 (404)
T 1gpj_A          166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY--------ERAVELARDL-----GGEA--V---RFDELVDHLA  226 (404)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH--------HHHHHHHHHH-----TCEE--C---CGGGHHHHHH
T ss_pred             cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCH--------HHHHHHHHHc-----CCce--e---cHHhHHHHhc
Confidence            4689999998 9999999999999998 899999976        333 222222     1121  1   2345677778


Q ss_pred             CCCEEEEecccC
Q 023244           82 GCTGVLHVATPV   93 (285)
Q Consensus        82 ~~d~vih~a~~~   93 (285)
                      ++|+||.+.+..
T Consensus       227 ~aDvVi~at~~~  238 (404)
T 1gpj_A          227 RSDVVVSATAAP  238 (404)
T ss_dssp             TCSEEEECCSSS
T ss_pred             CCCEEEEccCCC
Confidence            999999987643

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.86  E-value=0.0013  Score=54.57  Aligned_cols=67  Identities=21%  Similarity=0.159  Sum_probs=47.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|.|+|. |.+|+.+++.|++.|++|++.+|++        ++...+.+.     ++.       ...+..++++++
T Consensus         8 ~~~~IgiIG~-G~mG~~~A~~l~~~G~~V~~~dr~~--------~~~~~~~~~-----g~~-------~~~~~~e~~~~a   66 (306)
T 3l6d_A            8 FEFDVSVIGL-GAMGTIMAQVLLKQGKRVAIWNRSP--------GKAAALVAA-----GAH-------LCESVKAALSAS   66 (306)
T ss_dssp             CSCSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSH--------HHHHHHHHH-----TCE-------ECSSHHHHHHHS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCe-------ecCCHHHHHhcC
Confidence            3578999986 9999999999999999999999987        444433322     111       123455666678


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||-+..
T Consensus        67 DvVi~~vp   74 (306)
T 3l6d_A           67 PATIFVLL   74 (306)
T ss_dssp             SEEEECCS
T ss_pred             CEEEEEeC
Confidence            88886643

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.85  E-value=0.0012  Score=55.80  Aligned_cols=69  Identities=14%  Similarity=0.146  Sum_probs=50.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++...++++..   .. .+    .+.+.+.+   ++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~--------~~~~~~~~lGa---~~-v~----~~~~~~~~---~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNE--------HKKQDALSMGV---KH-FY----TDPKQCKE---EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSS--------TTHHHHHHTTC---SE-EE----SSGGGCCS---CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH--------HHHHHHHhcCC---Ce-ec----CCHHHHhc---CC
Confidence            4678999998 9999999988888899999999887        55666665521   11 12    33333322   79


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+||.+++.
T Consensus       236 D~vid~~g~  244 (348)
T 3two_A          236 DFIISTIPT  244 (348)
T ss_dssp             EEEEECCCS
T ss_pred             CEEEECCCc
Confidence            999998874

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.84  E-value=0.0016  Score=55.16  Aligned_cols=74  Identities=15%  Similarity=-0.025  Sum_probs=52.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .+.+|||+|+ |.+|...++.+...|.+|+++++++        ++...+. ++..  ..    ..|..+.+.+.++..+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~--------~~~~~~~~~lGa--~~----vi~~~~~~~~~~~~~g  244 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSN--------KKREEALQDLGA--DD----YVIGSDQAKMSELADS  244 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESST--------THHHHHHTTSCC--SC----EEETTCHHHHHHSTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCh--------HHHHHHHHHcCC--ce----eeccccHHHHHHhcCC
Confidence            4578999996 9999999988888899999999887        4444444 3321  11    1344455556665557


Q ss_pred             CCEEEEeccc
Q 023244           83 CTGVLHVATP   92 (285)
Q Consensus        83 ~d~vih~a~~   92 (285)
                      +|+||.+++.
T Consensus       245 ~D~vid~~g~  254 (357)
T 2cf5_A          245 LDYVIDTVPV  254 (357)
T ss_dssp             EEEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.83  E-value=0.0029  Score=51.23  Aligned_cols=67  Identities=19%  Similarity=0.220  Sum_probs=48.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +++++|+|+ |..|+.++..|.+.|.+|++..|+.        ++...+.+.     ++...  ++.+.       .++|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~--------~ka~~la~~-----~~~~~--~~~~l-------~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSS--------RGLDFFQRL-----GCDCF--MEPPK-------SAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC--------TTHHHHHHH-----TCEEE--SSCCS-------SCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCH--------HHHHHHHHC-----CCeEe--cHHHh-------ccCC
Confidence            578999998 9999999999999999999999988        444443322     12222  22221       1789


Q ss_pred             EEEEecccCC
Q 023244           85 GVLHVATPVD   94 (285)
Q Consensus        85 ~vih~a~~~~   94 (285)
                      +||++-....
T Consensus       175 iVInaTp~Gm  184 (269)
T 3phh_A          175 LIINATSASL  184 (269)
T ss_dssp             EEEECCTTCC
T ss_pred             EEEEcccCCC
Confidence            9999876543

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=96.83  E-value=0.0017  Score=55.02  Aligned_cols=34  Identities=15%  Similarity=0.111  Sum_probs=31.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|.|+|. |.+|+.++..|++.|++|++.+|++
T Consensus        22 ~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~   55 (358)
T 4e21_A           22 SMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNV   55 (358)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCH
Confidence            478999985 9999999999999999999999987

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	285
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	7e-35
d2b69a1	312	c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1	3e-33
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-28
d1r6da_	322	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	1e-27
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	9e-27
d2c5aa1	363	c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T	6e-22
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	1e-21
d1e6ua_	315	c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras	6e-21
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-20
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	5e-19
d1qyda_	312	c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {	5e-18
d1qyca_	307	c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta	3e-15
d1hdoa_	205	c.2.1.2 (A:) Biliverdin IX beta reductase {Human (	3e-15
d2q46a1	252	c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (	8e-15
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	9e-15
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	2e-14
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	5e-14
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-13
d1xgka_	350	c.2.1.2 (A:) Negative transcriptional regulator Nm	2e-13
d1gy8a_	383	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	2e-10
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	3e-10
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	3e-09
d1ek6a_	346	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	1e-08
d2bkaa1	232	c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H	3e-08
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	6e-08
d1vl0a_	281	c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD	1e-07
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	4e-06
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	1e-05
d2a35a1	212	c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse	0.001
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	3e-05
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-05
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	4e-05
d1n2sa_	298	c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct	5e-05
d1eq2a_	307	c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer	5e-05
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	6e-05
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-05
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	1e-04
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-04
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-04
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-04
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	5e-04
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	5e-04
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-04
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	0.001
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	0.002
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	0.002
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	0.002
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	0.003
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	0.003
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	0.004

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score =  126 bits (317), Expect = 7e-35
 Identities = 73/298 (24%), Positives = 112/298 (37%), Gaps = 23/298 (7%)

Query: 1   MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGAS 60
           + EG   V VTG  GF+AS ++ +LL+HGY V  T RS     +     L    +     
Sbjct: 8   LPEGS-LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLAN-----LQKRWDAKYPG 61

Query: 61  ERLRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
                   D+     +D  I G  GV H+A+ V F +K  E V       GTL  L++  
Sbjct: 62  RFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAI--GGTLNALRAAA 119

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVD---------MMDETFWSDVDYIRKLDSWGKSYAIS 171
            + +VKR V TSS  +      +V+          ++    +              YA S
Sbjct: 120 ATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS 179

Query: 172 KTLTERAALEFAEEHGL--DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE---YG 226
           KT  E AA +F +E+     L  ++P+  +G    P+      S   + L N E      
Sbjct: 180 KTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA 239

Query: 227 FLLNTSMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKYPEYPIPT 283
            +     V   D+   H+  L  P  + R    ++ T     +       YP    P 
Sbjct: 240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPA 297

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 3e-33
 Identities = 53/269 (19%), Positives = 99/269 (36%), Gaps = 27/269 (10%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + R+ +TGG GF+ S L  +L+  G+ V T V +      RN +     +N         
Sbjct: 1   RKRILITGGAGFVGSHLTDKLMMDGHEV-TVVDNFFTGRKRNVEHWIGHENF-------- 51

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKS 122
               +L + D  +        + H+A+P         P + + +    GTL +L    + 
Sbjct: 52  ----ELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTL-KTNTIGTLNMLGLAKRV 106

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G   R++  S++    Y D +V    E +W  V+ I         Y   K + E     +
Sbjct: 107 G--ARLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPR----ACYDEGKRVAETMCYAY 158

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE--YGFLLNT-SMVHVDDV 239
            ++ G+++         GP +       V + +   L       YG    T +  +V D+
Sbjct: 159 MKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL 218

Query: 240 ARAHIFLLEYPDAKGRYICSSHTLTIQEM 268
               + L+    +    + +    TI E 
Sbjct: 219 VNGLVALMNSNVSSPVNLGNPEEHTILEF 247

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score =  110 bits (275), Expect = 1e-28
 Identities = 50/274 (18%), Positives = 94/274 (34%), Gaps = 31/274 (11%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TGG GFI S ++  ++ +       +          + +L  L ++   S R    
Sbjct: 2   KILITGGAGFIGSAVVRHIIKNTQDTVVNIDK-----LTYAGNLESLSDISE-SNRYNFE 55

Query: 67  HADLSHPDGFDAAIAG--CTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           HAD+                 V+H+A  + VD     P   I +  I GT  +L+   K 
Sbjct: 56  HADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFI-ETNIVGTYALLEVARKY 114

Query: 123 G--------TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTL 174
                       R  + S+   V+ +    D ++ +    +       +    Y+ SK  
Sbjct: 115 WSALGEDKKNNFRFHHIST-DEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKAS 173

Query: 175 TERAALEFAEEHGLDLVTLIPSMVVGPF-----ICPKFAGSVRSSLALILGNREEYGFLL 229
           ++     +   +GL  +    S   GP+     + P    +      L +     YG   
Sbjct: 174 SDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPI-----YGKGD 228

Query: 230 NT-SMVHVDDVARAHIFLLEYPDAKGRYICSSHT 262
                ++V+D ARA   ++    A   Y    H 
Sbjct: 229 QIRDWLYVEDHARALHMVVTEGKAGETYNIGGHN 262

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

 Score =  106 bits (266), Expect = 1e-27
 Identities = 60/286 (20%), Positives = 95/286 (33%), Gaps = 25/286 (8%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           R+ VTGG GFI S  + +LL   Y         +      + + + L  +  A  RLR  
Sbjct: 2   RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD-ADPRLRFV 60

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRA-INGTLGILKSCLKSGTV 125
           H D+         + G   ++H A     +       +     + GT  +L+  + +G  
Sbjct: 61  HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV- 119

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            RVV+ S+N    Y   D     E+   + +           YA SK  ++  A  +   
Sbjct: 120 GRVVHVSTNQV--YGSIDSGSWTESSPLEPNSP---------YAASKAGSDLVARAYHRT 168

Query: 186 HGLDLVTLIPSMVVGP-----FICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDDV 239
           +GLD+         GP      + P F  ++     L L     YG   N    VH DD 
Sbjct: 169 YGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPL-----YGDGANVREWVHTDDH 223

Query: 240 ARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
            R    +L    A   Y               +          +V 
Sbjct: 224 CRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVR 269

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score =  104 bits (261), Expect = 9e-27
 Identities = 48/276 (17%), Positives = 86/276 (31%), Gaps = 27/276 (9%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              +TG TG   S+L   LL+ GY V    R            +   ++    + +  + 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHI--YQDPHTCNPKFHLH 60

Query: 67  HADLSHPDGFDAAIAGC----TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           + DLS        +          L   + V    + PE         GTL +L++    
Sbjct: 61  YGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTA-DVDAMGTLRLLEAIRFL 119

Query: 123 GT--VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS-YAISKTLTERAA 179
           G     R    S++    Y         ET               +S YA++K       
Sbjct: 120 GLEKKTRFYQASTSEL--YGLVQEIPQKETTPFY----------PRSPYAVAKLYAYWIT 167

Query: 180 LEFAEEHGLDLVTLIPSMVVGPFICPKFAGS-VRSSLALILGNREEYGFLLNT----SMV 234
           + + E +G+     I      P     F    +  ++A I    E   +L N        
Sbjct: 168 VNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWG 227

Query: 235 HVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAE 270
           H  D  +    +L+    +   I +    ++++  E
Sbjct: 228 HAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVE 263

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 91.9 bits (227), Expect = 6e-22
 Identities = 48/274 (17%), Positives = 89/274 (32%), Gaps = 26/274 (9%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TG  GFIAS +  RL   G+ V        D      K+    +++          
Sbjct: 17  KISITGAGGFIASHIARRLKHEGHYVIA-----SD----WKKNEHMTEDMFCD----EFH 63

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAIN--GTLGILKSCLKSGT 124
             DL   +       G   V ++A  +                N   +  ++++   +G 
Sbjct: 64  LVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING- 122

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           +KR  Y SS        +          SD       D    ++ + K  TE     + +
Sbjct: 123 IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQD----AFGLEKLATEELCKHYNK 178

Query: 185 EHGLDLVTLIPSMVVGP-----FICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDD 238
           + G++        + GP         K   +            E +G  L T S   +D+
Sbjct: 179 DFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDE 238

Query: 239 VARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFL 272
                + L +    +   I S   +++ EMAE +
Sbjct: 239 CVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMV 272

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 90.1 bits (222), Expect = 1e-21
 Identities = 41/270 (15%), Positives = 79/270 (29%), Gaps = 26/270 (9%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              VTG TG   ++L   LL+ GY V   V           ++L    +       ++  
Sbjct: 2   SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGD-------IQYE 54

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLG---ILKSCLKSG 123
             D++       A+                            +   LG   +L++  +  
Sbjct: 55  DGDMADACSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS 114

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
              R    S+  +  +     +  DE                  Y ++K       + + 
Sbjct: 115 PETRFYQAST--SEMFGLIQAERQDENTPFY---------PRSPYGVAKLYGHWITVNYR 163

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGS--VRSSLALILGNREE--YGFLLNT-SMVHVDD 238
           E  GL   + I      P    +F       +   + LG ++E   G +          D
Sbjct: 164 ESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGD 223

Query: 239 VARAHIFLLEYPDAKGRYICSSHTLTIQEM 268
              A   +L+   A    + +  T T+++M
Sbjct: 224 YVEAMWLMLQQDKADDYVVATGVTTTVRDM 253

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

 Score = 88.4 bits (218), Expect = 6e-21
 Identities = 32/207 (15%), Positives = 67/207 (32%), Gaps = 32/207 (15%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTV-RSELDPEHRNSKDLSFLKNLPGASERL 63
           K RV + G  G + S +  +L   G        R EL+    +S+ +             
Sbjct: 2   KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELN--LLDSRAV------------- 46

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
                D    +  D        V          +         + +     I+ +  ++ 
Sbjct: 47  ----HDFFASERIDQVYLAAAKVGG-----IVANNTYPADFIYQNMMIESNIIHAAHQND 97

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
            V ++++  S+    Y       M E+          L+   + YAI+K    +    + 
Sbjct: 98  -VNKLLFLGSSCI--YPKLAKQPMAESEL----LQGTLEPTNEPYAIAKIAGIKLCESYN 150

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGS 210
            ++G D  +++P+ + GP      + S
Sbjct: 151 RQYGRDYRSVMPTNLYGPHDNFHPSNS 177

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.0 bits (214), Expect = 3e-20
 Identities = 46/270 (17%), Positives = 74/270 (27%), Gaps = 24/270 (8%)

Query: 10  VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD 69
           +TG TG   S+L   LL+ GY V   VR          + L            +++ + D
Sbjct: 6   ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA-HIEGNMKLHYGD 64

Query: 70  LSHPDGFDAAIAGCTGVLH----VATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG-- 123
           L+        I              + V       E         GTL +L +    G  
Sbjct: 65  LTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTA-DVDGVGTLRLLDAVKTCGLI 123

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
              +    S++    Y         ET                 Y  +K       + F 
Sbjct: 124 NSVKFYQASTSEL--YGKVQEIPQKETTPFYPRSP---------YGAAKLYAYWIVVNFR 172

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-----SMVHVDD 238
           E + L  V  I      P     F     S     +   +   F L          H  D
Sbjct: 173 EAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKD 232

Query: 239 VARAHIFLLEYPDAKGRYICSSHTLTIQEM 268
              A   +L+  + +   I +    +++E 
Sbjct: 233 YVEAMWLMLQNDEPEDFVIATGEVHSVREF 262

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 83.5 bits (205), Expect = 5e-19
 Identities = 45/255 (17%), Positives = 87/255 (34%), Gaps = 11/255 (4%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            + VTGG GFI S  +  + ++   V  TV  +L      + + + L+ + G  +R+ + 
Sbjct: 4   NIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLT----YAGNKANLEAILG--DRVELV 57

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATP--VDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
             D++  +  D   A    ++H A     D    +P   I      GT  +L++  K   
Sbjct: 58  VGDIADAELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHT-NFIGTYTLLEAARKYDI 116

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
               V T          +D+    E            +     Y+ +K  ++     +  
Sbjct: 117 RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSS-PYSSTKAASDLIVKAWVR 175

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT-SMVHVDDVARAH 243
             G+       S   GP+   +     + +  L     + YG   N    +H +D +   
Sbjct: 176 SFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGV 235

Query: 244 IFLLEYPDAKGRYIC 258
             +L        Y+ 
Sbjct: 236 WAILTKGRMGETYLI 250

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

 Score = 80.2 bits (196), Expect = 5e-18
 Identities = 40/290 (13%), Positives = 80/290 (27%), Gaps = 45/290 (15%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           + K RV + GGTG+I   ++   +  G+      R E+       + L + K L      
Sbjct: 1   DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL-----G 55

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
            ++  A L        A+     V+             E++    A            ++
Sbjct: 56  AKLIEASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEA----------IKEA 105

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
           G +KR + +         +  +     TF       R +++    Y              
Sbjct: 106 GNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVS---------- 155

Query: 183 AEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARA 242
                        +M  G F     A      +             +    V  DDV   
Sbjct: 156 ------------SNMFAGYFA-GSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTY 202

Query: 243 HIFLLEYPDAKGR---YICSSHTLTIQEMAEFLSA----KYPEYPIPTVE 285
            I  ++ P    +        + L+ +E+ +           +  I + +
Sbjct: 203 TIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 252

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

 Score = 72.5 bits (176), Expect = 3e-15
 Identities = 35/274 (12%), Positives = 68/274 (24%), Gaps = 46/274 (16%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           + R+ + G TG+I   +    LD G+     VR      +     L       GA     
Sbjct: 3   RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGA----N 58

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           I H  +        A+     V+     +  E +       +                  
Sbjct: 59  IVHGSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVG--------------- 103

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
             +  + S       N   V+     F       R +++ G  Y                
Sbjct: 104 TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVS------------ 151

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
                      +   G F+  +       +                   V  +D+    I
Sbjct: 152 ----------SNCFAGYFL--RSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTI 199

Query: 245 FLLEYPDAKGR---YICSSHTLTIQEMAEFLSAK 275
             ++ P    +       ++TL++ E+      K
Sbjct: 200 KAVDDPRTLNKTLYLRLPANTLSLNELVALWEKK 233

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.8 bits (172), Expect = 3e-15
 Identities = 32/255 (12%), Positives = 66/255 (25%), Gaps = 56/255 (21%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ + G TG      + + +  GY VT  VR          +                + 
Sbjct: 5   KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR-------------PAHVV 51

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D+      D  +AG   V+ +    +            R I        + +K+  V 
Sbjct: 52  VGDVLQAADVDKTVAGQDAVIVLLGTRNDLSPTTVMSEGARNI-------VAAMKAHGVD 104

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           +VV  +S   ++   K    +                                 +   E 
Sbjct: 105 KVVACTSAFLLWDPTKVPPRLQAVTDDH----------------------IRMHKVLRES 142

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFL 246
           GL  V ++P  +              +    +  +         + ++   D+    +  
Sbjct: 143 GLKYVAVMPPHIGDQP---------LTGAYTVTLDGR-----GPSRVISKHDLGHFMLRC 188

Query: 247 LEYPDAKGRYICSSH 261
           L   +  G     SH
Sbjct: 189 LTTDEYDGHSTYPSH 203

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 70.2 bits (170), Expect = 8e-15
 Identities = 31/272 (11%), Positives = 69/272 (25%), Gaps = 35/272 (12%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
            V VTG +G     +  +L +                    +     + + G ++     
Sbjct: 5   TVLVTGASGRTGQIVYKKLKEGSDKFVAKG---------LVRSAQGKEKIGGEADVFIGD 55

Query: 67  HADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVK 126
             D    +     I     +L  A P      +P +      I       +     G   
Sbjct: 56  ITDADSINPAFQGIDALV-ILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKN 114

Query: 127 RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH 186
           +              K   +        +          K    +  + +R A ++  + 
Sbjct: 115 Q----------IDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADS 164

Query: 187 GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFL 246
           G     +    ++               +  +L  +++     +T  V   DVA   I  
Sbjct: 165 GTPYTIIRAGGLLDK----------EGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQA 214

Query: 247 LEYPDAKGRYI-----CSSHTLTIQEMAEFLS 273
           L + +AK +           +   ++     S
Sbjct: 215 LLFEEAKNKAFDLGSKPEGTSTPTKDFKALFS 246

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 71.3 bits (173), Expect = 9e-15
 Identities = 44/290 (15%), Positives = 79/290 (27%), Gaps = 19/290 (6%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           +    +TG TG   S+L   LL  GY V   +R   +   +    +    +       ++
Sbjct: 1   RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVN-KALMK 59

Query: 65  IFHADLSHPDGFDAAIAGCTGVLH----VATPVDFEDKEPEEVITQRAINGTLGILKSCL 120
           + +ADL+        I              + V    + P+      A      +     
Sbjct: 60  LHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRS 119

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
            +    R V      +            ET                 YA SK       +
Sbjct: 120 HTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSP---------YAASKCAAHWYTV 170

Query: 181 EFAEEHGLDLVTLIPSMVVGPFICPKFAGS--VRSSLALILGNREE--YGFLLNT-SMVH 235
            + E +GL     I      P     F      R+   + +G + +   G L  +     
Sbjct: 171 NYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGF 230

Query: 236 VDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
             D   A   +L+        + +    T++E  +             VE
Sbjct: 231 AGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVE 280

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 70.1 bits (170), Expect = 2e-14
 Identities = 52/299 (17%), Positives = 101/299 (33%), Gaps = 32/299 (10%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           ++ +TGG GF+ S L    L  G  +             N   LS L N           
Sbjct: 2   KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGN-------FEFV 54

Query: 67  HADLSHPDGFDAAIAGC--TGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           H D+ + +     I         H+A    +      P     +  + GTL +L++  + 
Sbjct: 55  HGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDF-EINVGGTLNLLEAVRQY 113

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK-----SYAISKTLTER 177
            +   ++Y+S+N      ++      ET ++ VD     D   +      Y  SK   ++
Sbjct: 114 NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQ 173

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-----SVRSSLALILGNREEYGFLLNTS 232
             L++A   GL+ V    S + G      +         + ++ +  G  + +    N  
Sbjct: 174 YMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK 233

Query: 233 MV----HVDDVARAHIFLLEYPDAKG-----RYICSSHTLTIQEMAEFLSAKYPEYPIP 282
            V    H +D+   +   L                  ++L++ E+ + L   Y    + 
Sbjct: 234 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLL-EDYCNIDMR 291

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 68.8 bits (167), Expect = 5e-14
 Identities = 47/286 (16%), Positives = 90/286 (31%), Gaps = 25/286 (8%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
              +TG  GFI S L+  LL     V   + +      RN  ++  L +    S   +  
Sbjct: 18  VWLITGVAGFIGSNLLETLLKLDQKV-VGLDNFATGHQRNLDEVRSLVSEKQWS-NFKFI 75

Query: 67  HADLSHPDGFDAAIAGCTGV--LHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
             D+ + D  + A AG   V        V     +P        I+G L +L +   +  
Sbjct: 76  QGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSN-ATNIDGFLNMLIAARDAKV 134

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
                  SS+    Y D       E                  YA++K + E  A  F+ 
Sbjct: 135 QSFTYAASSS---TYGDHPGLPKVEDTI---------GKPLSPYAVTKYVNELYADVFSR 182

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGS--VRSSLALILGNRE--EYGFLLNT-SMVHVDDV 239
            +G   + L    V G    P  A +  +    + ++   +    G    +    ++++ 
Sbjct: 183 CYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 242

Query: 240 ARAHIFLLEYPDAKGRYI---CSSHTLTIQEMAEFLSAKYPEYPIP 282
            +A++            +         ++ ++   L     E  + 
Sbjct: 243 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVS 288

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 67.7 bits (164), Expect = 1e-13
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 45/294 (15%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
           RV VTGG+G+I S   ++LL +G+ V   + +  + +      +  L       +     
Sbjct: 2   RVLVTGGSGYIGSHTCVQLLQNGHDV-IILDNLCNSKRSVLPVIERLGG-----KHPTFV 55

Query: 67  HADLSHPDGFDAAIA--GCTGVLHVA--TPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
             D+ +       +       V+H A    V    ++P E      +NGTL ++ +   +
Sbjct: 56  EGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYY-DNNVNGTLRLISAMRAA 114

Query: 123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEF 182
             VK  +++SS     Y D+      E+F +              Y  SK + E+   + 
Sbjct: 115 N-VKNFIFSSSATV--YGDQPKIPYVESFPTGTPQS--------PYGKSKLMVEQILTDL 163

Query: 183 AEEHGLDLVTLI-PSMVVGPFICPKFAGSVRSSLALI--------LGNREE---YGFLLN 230
            +      + L+     VG           +     +        +G R+    +G    
Sbjct: 164 QKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP 223

Query: 231 T-------SMVHVDDVARAHIFLLEYPDAKGRY----ICSSHTLTIQEMAEFLS 273
           T         +HV D+A  H+  +E    K       + +    ++ ++    S
Sbjct: 224 TEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFS 277

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

 Score = 67.4 bits (163), Expect = 2e-13
 Identities = 36/273 (13%), Positives = 75/273 (27%), Gaps = 46/273 (16%)

Query: 5   KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           K  + V G TG   + LI      G+ V   V      +   +++L  + N       + 
Sbjct: 3   KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVH---SLKGLIAEELQAIPN-------VT 52

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
           +F   L +       +     +  + T     D+          I     +  +  ++GT
Sbjct: 53  LFQGPLLNNVPLMDTLFEGAHLAFINTTSQAGDE----------IAIGKDLADAAKRAGT 102

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
           ++  +Y+S      Y       M    ++  +Y+R             +    A +    
Sbjct: 103 IQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVR--------QLGLPSTFVYAGIYNNN 154

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
              L        ++                L  +                   DV  A +
Sbjct: 155 FTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWL---------------DAEHDVGPALL 199

Query: 245 FLLEYPDAKG---RYICSSHTLTIQEMAEFLSA 274
            + +    K    R   +  TL+  ++    S 
Sbjct: 200 QIFKDGPQKWNGHRIALTFETLSPVQVCAAFSR 232

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

 Score = 58.3 bits (139), Expect = 2e-10
 Identities = 62/334 (18%), Positives = 102/334 (30%), Gaps = 59/334 (17%)

Query: 7   RVCVTGGTGFIASWLIMRLL-DHGYSVT-----TTVRSELDPEHRNSKDLSFLKNLPG-- 58
           RV V GG G+I S  +  LL D  +SV           + D           L+   G  
Sbjct: 4   RVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPK 63

Query: 59  ---ASERLRIFHADLSHPDGFDAAIAGCTGV--LHVATPVDFEDKEPEEVITQRAINGTL 113
              A     +   D+ + D  +        +  +          +   + +     N   
Sbjct: 64  PPWADRYAALEVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVG 123

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKT 173
            +             +  SS+AA+F N     +       D++  +  +S    Y  SK 
Sbjct: 124 ILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPESP---YGESKL 180

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVG------------------PFICPKFAGSVRSSL 215
           + ER   + AE +G+  + L      G                  P I  +    +    
Sbjct: 181 IAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQ 240

Query: 216 AL-------------ILGNREEYGFLLNT-SMVHVDDVARAHIFLLEYPDAKGRY----- 256
            L             I G              VHV D+A AHI  L+Y +  G       
Sbjct: 241 RLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKY 300

Query: 257 -----ICSSHTLTIQEMAEFLSAKYPEYPIPTVE 285
                + +S   +++E+ E    K   +PIP  E
Sbjct: 301 FSVFNLGTSRGYSVREVIEVA-RKTTGHPIPVRE 333

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 57.8 bits (138), Expect = 3e-10
 Identities = 37/254 (14%), Positives = 75/254 (29%), Gaps = 29/254 (11%)

Query: 8   VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH 67
           V VTGG G+I S  ++ L+++GY       +  +  + +   L  L         +  + 
Sbjct: 4   VLVTGGAGYIGSHTVVELIENGYDC-VVADNLSNSTYDSVARLEVLTK-----HHIPFYE 57

Query: 68  ADLSHPDGFDAAIA--GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV 125
            DL    G +          V+H A      +     +           +L   ++   V
Sbjct: 58  VDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNV 117

Query: 126 KRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE 185
            + V++SS        +  +M+       +            Y  +K   E    +    
Sbjct: 118 SKFVFSSSATVYGDATRFPNMIPIPEECPLGPT-------NPYGHTKYAIENILNDLYNS 170

Query: 186 HGLDLVTLI----------PSMVVGPFICPKFAGSVRSSLALILGNREE---YGFLLNT- 231
                   I          PS ++G          +     + +G RE+   +G   ++ 
Sbjct: 171 DKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSR 230

Query: 232 SMVHVDDVARAHIF 245
               + D       
Sbjct: 231 DGTPIRDYIHVVDL 244

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 54.6 bits (129), Expect = 3e-09
 Identities = 35/218 (16%), Positives = 62/218 (28%), Gaps = 23/218 (10%)

Query: 4   GKGRVCVTGGTGFIASWLIMRLLDHGYSVT------------TTVRSELDPEHRNSKDLS 51
           G  RV V GG G+      + L    Y V                   L P       +S
Sbjct: 1   GS-RVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRIS 59

Query: 52  FLKNLPGASERLRIFHADLSHPDGFDAAIA------GCTGVLHVATPVDFEDKEPEEVIT 105
             K L G  + + ++  D+   +    +                + P    D+       
Sbjct: 60  RWKALTG--KSIELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQ 117

Query: 106 QRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDV--DYIRKLDS 163
              + GTL +L +  + G    +V   +       + D++    T   +   D +     
Sbjct: 118 HNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQ 177

Query: 164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGP 201
               Y +SK           +  G+    L   +V G 
Sbjct: 178 ASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGV 215

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.8 bits (125), Expect = 1e-08
 Identities = 43/305 (14%), Positives = 86/305 (28%), Gaps = 44/305 (14%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGYSVTT--TVRSELDPEHRNSKDLSFLKNLPGASERLR 64
           +V VTGG G+I S  ++ LL+ GY         +         + L  ++ L G    + 
Sbjct: 4   KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTG--RSVE 61

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATP----VDFEDKEPEEVITQRAINGTLGILKSCL 120
               D+             + +  +       V    ++P +              +  L
Sbjct: 62  FEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYY------------RVNL 109

Query: 121 KSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAAL 180
                   +  +             +     +  +D           Y  SK   E    
Sbjct: 110 TGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIR 169

Query: 181 EFAE-EHGLDLVTLIPSMVVGPFICPKFAGS--------VRSSLALILGNREE---YGFL 228
           +  + +   + V L      G                  +     + +G RE    +G  
Sbjct: 170 DLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND 229

Query: 229 LNT-------SMVHVDDVARAHIFLLEYPDAKGRY----ICSSHTLTIQEMAEFLSAKYP 277
            +T         +HV D+A+ HI  L     +       + +    ++ +M + +  K  
Sbjct: 230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAM-EKAS 288

Query: 278 EYPIP 282
              IP
Sbjct: 289 GKKIP 293

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.9 bits (120), Expect = 3e-08
 Identities = 33/266 (12%), Positives = 67/266 (25%), Gaps = 52/266 (19%)

Query: 7   RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLR 64
            V + G +G     L+  +L+ G    VT   R +L  +    K+++             
Sbjct: 16  SVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVV------DFE 69

Query: 65  IFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT 124
                 S   G D            A    F   + + V+    +    G     L S  
Sbjct: 70  KLDDYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK 129

Query: 125 VKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE 184
                 +S+   +    +    ++E  +      R                         
Sbjct: 130 GAD--KSSNFLYLQVKGEVEAKVEELKFDRYSVFR------------------------- 162

Query: 185 EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI 244
                     P +++      +    +       L          +   V V  V RA +
Sbjct: 163 ----------PGVLLCDRQESRPGEWLVRKFFGSLP-----DSWASGHSVPVVTVVRAML 207

Query: 245 FLLEYPDAKGRYICSSHTLTIQEMAE 270
             +  P  K   +  +    I ++ +
Sbjct: 208 NNVVRPRDKQMELLENK--AIHDLGK 231

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 50.6 bits (119), Expect = 6e-08
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 9/71 (12%)

Query: 4  GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
          GK RV VTG TGF   WL + L   G +V                  S  +     ++ +
Sbjct: 8  GK-RVFVTGHTGFKGGWLSLWLQTMGATVKGYSL-------TAPTVPSLFETA-RVADGM 58

Query: 64 RIFHADLSHPD 74
          +    D+   +
Sbjct: 59 QSEIGDIRDQN 69

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

 Score = 49.4 bits (116), Expect = 1e-07
 Identities = 10/51 (19%), Positives = 21/51 (41%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP 57
          ++ +TG  G +   +  +L      V  T   +LD  +  + +  F +  P
Sbjct: 3  KILITGANGQLGREIQKQLKGKNVEVIPTDVQDLDITNVLAVNKFFNEKKP 53

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 44.9 bits (104), Expect = 4e-06
 Identities = 16/74 (21%), Positives = 23/74 (31%), Gaps = 11/74 (14%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIF 66
          RV + G  GFI + L  RLL   +     +          S  +S   N P         
Sbjct: 2  RVLILGVNGFIGNHLTERLLREDHYEVYGLD-------IGSDAISRFLNHP----HFHFV 50

Query: 67 HADLSHPDGFDAAI 80
            D+S    +    
Sbjct: 51 EGDISIHSEWIEYH 64

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 43.2 bits (100), Expect = 1e-05
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS 38
          RV + G TG     L+ R+L           +
Sbjct: 4  RVLLAGATGLTGEHLLDRILSEPTLAKVIAPA 35

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 8/65 (12%)

Query: 195 PSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG 254
           PS++ GP    + A  + + +A IL  +           +   D+ARA   L        
Sbjct: 146 PSLLFGPREEFRLAEILAAPIARILPGK--------YHGIEACDLARALWRLALEEGKGV 197

Query: 255 RYICS 259
           R++ S
Sbjct: 198 RFVES 202

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 39/264 (14%), Positives = 80/264 (30%), Gaps = 30/264 (11%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G+   +TG +  I     +     G  VT T R+E   E    +    +      +E++
Sbjct: 3   SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLE----ETKQQILKAGVPAEKI 58

Query: 64  RIFHADLSHPDGFDAAIA------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILK 117
               AD++   G D  I       G   +L      +  D              T  +  
Sbjct: 59  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKL-- 116

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK----T 173
                   + V+  +            ++++ +         +  S    YA +K     
Sbjct: 117 ------NFQAVIEMTQKTKEHLIKTKGEIVNVSSIV---AGPQAHSGYPYYACAKAALDQ 167

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM 233
            T   A++   +HG+ + ++ P  V   F+         S          +    +    
Sbjct: 168 YTRCTAIDLI-QHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG-HC 225

Query: 234 VHVDDVARAHIFLLEYPDAKGRYI 257
              +++A   +FL +   +   YI
Sbjct: 226 GKPEEIANIIVFLADRNLS--SYI 247

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (98), Expect = 3e-05
 Identities = 42/270 (15%), Positives = 80/270 (29%), Gaps = 58/270 (21%)

Query: 1   MEEGKGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGA 59
           ME  + R+  VTG +G I + +   L+  G  V    R+  + E     +L+      G 
Sbjct: 5   MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIE-----ELAAECKSAGY 59

Query: 60  SERLRIFHADLSHPDGFDAAIA-------------GCTGVLHVATPVDFEDKEPEEVITQ 106
              L  +  DLS+ +   +  +                G+    T +       +++   
Sbjct: 60  PGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNV 119

Query: 107 R---AINGTLGILKSCLKSGTVK-RVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD 162
                   T    +S  +       ++  +S +                           
Sbjct: 120 NVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPL-------------------- 159

Query: 163 SWGKSYAISK----TLTERAALEFAE-EHGLDLVTLIPSMVVGPFICPKFAGSVRSSLAL 217
           S    Y+ +K     LTE    E  E +  +    + P +V   F           + A 
Sbjct: 160 SVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT 219

Query: 218 ILGNREEYGFLLNTSMVHVDDVARAHIFLL 247
               +           +  +DVA A I++L
Sbjct: 220 YEQMK----------CLKPEDVAEAVIYVL 239

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 39/280 (13%), Positives = 78/280 (27%), Gaps = 60/280 (21%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
             +V  +TG +  I     +     G  VT T R     E    +    +     + + +
Sbjct: 4   AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLE----ETRQQILAAGVSEQNV 59

Query: 64  RIFHADLSHPDGFDAAIAG-------------CTGVLHVATPVDFEDKEPEEVITQRAIN 110
               AD++   G D  ++                G     +       +  E      +N
Sbjct: 60  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESY-DATLN 118

Query: 111 GTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAI 170
             L            + V+  +       +            S    +     +   Y+I
Sbjct: 119 LNL------------RSVIALT--KKAVPHLSSTKGEIVNISSIASGLHATPDFP-YYSI 163

Query: 171 SK----TLTERAALEFAEEHGLDLVTLIPSMVVGPFIC---------PKFAGSVRSSLAL 217
           +K      T   A++   +HG+ + ++ P +V   F            KF  ++ +    
Sbjct: 164 AKAAIDQYTRNTAIDLI-QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKEC 222

Query: 218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYI 257
           +              M    D+A    FL +   +   YI
Sbjct: 223 VPAGV----------MGQPQDIAEVIAFLADRKTS--SYI 250

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

 Score = 41.9 bits (96), Expect = 5e-05
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 7  RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS 38
           + + G TG +   L   L   G  +   V S
Sbjct: 2  NILLFGKTGQVGWELQRSLAPVGNLIALDVHS 33

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

 Score = 41.9 bits (96), Expect = 5e-05
 Identities = 12/29 (41%), Positives = 16/29 (55%)

Query: 8  VCVTGGTGFIASWLIMRLLDHGYSVTTTV 36
          + VTGG GFI S ++  L D G +    V
Sbjct: 2  IIVTGGAGFIGSNIVKALNDKGITDILVV 30

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 6e-05
 Identities = 40/254 (15%), Positives = 76/254 (29%), Gaps = 34/254 (13%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           +G+V  VTGG   I   ++  LL+ G +V    R     +    +  + L     A  R+
Sbjct: 11  QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQA--RV 68

Query: 64  RIFHADLSHPDGFDAAIA------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILK 117
                ++ + +  +  +       G    L       F    P E I+ +  +  L    
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLS--PAEHISSKGWHAVLET-- 124

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTER 177
                  +    Y        +  +    +                 G + A    LT+ 
Sbjct: 125 ------NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKS 178

Query: 178 AALEFAEEHGLDLVTLIPSMVVGPFICPKFAGS----VRSSLALILGNREEYGFLLNTSM 233
            ALE+A   G+ +  + P ++        +          S   I   R          +
Sbjct: 179 LALEWA-CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKR----------I 227

Query: 234 VHVDDVARAHIFLL 247
              ++V+    FLL
Sbjct: 228 GVPEEVSSVVCFLL 241

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 41.1 bits (96), Expect = 7e-05
 Identities = 36/266 (13%), Positives = 77/266 (28%), Gaps = 60/266 (22%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           +G    VTGG+  I   ++  L   G SV T  R++ +           L        ++
Sbjct: 7   EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELN-------DCLTQWRSKGFKV 59

Query: 64  RIFHADLSHPDGFDAAIAG--------------CTGVLHVATPVDFEDKEPEEVIT---Q 106
                DLS        +                  G++      D+  ++   +++   +
Sbjct: 60  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFE 119

Query: 107 RAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK 166
            A + ++        S     V  +S + A+    + V                      
Sbjct: 120 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGA------------------- 160

Query: 167 SYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFI-----CPKFAGSVRSSLALILGN 221
           +      LT   A E+A +  + +  + P ++    +      P+   ++   +      
Sbjct: 161 TKGAMDQLTRCLAFEWA-KDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR 219

Query: 222 REEYGFLLNTSMVHVDDVARAHIFLL 247
           R          M    ++A    FL 
Sbjct: 220 R----------MGEPKELAAMVAFLC 235

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 39.9 bits (93), Expect = 1e-04
 Identities = 34/255 (13%), Positives = 67/255 (26%), Gaps = 44/255 (17%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           K ++  +TGG   I   +  R    G  +               ++L           R+
Sbjct: 4   KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL---------GRRV 54

Query: 64  RIFHADLSHPDGFDAAIAGCT---GVLHV-------ATPVDFEDKEPEEVITQRAINGTL 113
                D+S P   +A         G   +          + F++   E+      IN   
Sbjct: 55  LTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEIN--- 111

Query: 114 GILKSCLKSGTVKRVVYTSSNAAVFYNDKDV-DMMDETFWSDVDYIRKLDSWGKSYAISK 172
                      V      +              +++ T  +    I     +  + A + 
Sbjct: 112 -----------VDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANI 160

Query: 173 TLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTS 232
             T   A +   + G+ +  + PS+V           ++   L  +L             
Sbjct: 161 GFTRALASDLG-KDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQ------ 213

Query: 233 MVHVDDVARAHIFLL 247
                D+  A  FL 
Sbjct: 214 --VPLDLTGAAAFLA 226

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 45/256 (17%), Positives = 72/256 (28%), Gaps = 51/256 (19%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            GR   VTG    I    +  L   G  V    R++ D           L +L      +
Sbjct: 6   AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQAD-----------LDSLVRECPGI 54

Query: 64  RIFHADLSHPDGFDAAIAGCTGV------LHVATPVDFEDKEPEEVITQRAINGTLGILK 117
                DL   +  + A+     V        VA    F +   E       +N       
Sbjct: 55  EPVCVDLGDWEATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVN------- 107

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK----T 173
                    R V   S                   S     R + +    Y  +K     
Sbjct: 108 --------LRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNH-SVYCSTKGALDM 158

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG--SVRSSLALILGNREEYGFLLNT 231
           LT+  ALE    H + +  + P++V+       ++     ++ L  I   +         
Sbjct: 159 LTKVMALELG-PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGK--------- 208

Query: 232 SMVHVDDVARAHIFLL 247
               V+ V  A +FLL
Sbjct: 209 -FAEVEHVVNAILFLL 223

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 29/257 (11%), Positives = 64/257 (24%), Gaps = 48/257 (18%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G+   +TG    I   + +     G SV  +  +     H        +  +     + 
Sbjct: 10  DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANH-------VVDEIQQLGGQA 62

Query: 64  RIFHADLSHPDGFDAAIAGCT---GVLHV---------ATPVDFEDKEPEEVITQRAING 111
                D++      A         G + +           P D    +          + 
Sbjct: 63  FACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSF 122

Query: 112 TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAIS 171
                              +   A     +    ++  T  +  +    + S+  S A +
Sbjct: 123 FH----------------LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAA 166

Query: 172 KTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSS-LALILGNREEYGFLLN 230
             L    A +   E  + +  + P  ++   +       +    L      R        
Sbjct: 167 SHLVRNMAFDLG-EKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRR-------- 217

Query: 231 TSMVHVDDVARAHIFLL 247
             +    D+A A +FL 
Sbjct: 218 --LGQPQDIANAALFLC 232

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 29/247 (11%), Positives = 67/247 (27%), Gaps = 15/247 (6%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           +G+V  VTG    I   + M L   G  V     +  +           +  +       
Sbjct: 17  EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEE------VVAAIKKNGSDA 70

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
               A++   +            + +   +D        V      + T         + 
Sbjct: 71  ACVKANVGVVEDIVRMFE---EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVF-TI 126

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFA 183
             +   + +  A          ++  +       + K   +  S    +T     A++ A
Sbjct: 127 NTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMA 186

Query: 184 EEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSM---VHVDDVA 240
            +  + +  + P  +            + +   L     +EY  +  + +       D+A
Sbjct: 187 -DKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIA 245

Query: 241 RAHIFLL 247
           R   FL 
Sbjct: 246 RVVCFLA 252

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 33/257 (12%), Positives = 70/257 (27%), Gaps = 46/257 (17%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           K +   VTGGT  I   ++      G  + T  R+E +           L        ++
Sbjct: 7   KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELN-------ECLSKWQKKGFQV 59

Query: 64  RIFHADLSHPDGFDAAIAGCT----GVLHV-------ATPVDFEDKEPEEVITQRAINGT 112
                D S     +  +   +    G L +              D   E+     + N  
Sbjct: 60  TGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTN-- 117

Query: 113 LGILKSCLKSGTVKRVVYTSSNAAVFY-NDKDVDMMDETFWSDVDYIRKLDSWGKSYAIS 171
                       ++   + S  A          +++  +  + V        +  +    
Sbjct: 118 ------------LESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGAL 165

Query: 172 KTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL-ALILGNREEYGFLLN 230
             L    A E+A   G+    + P+++  P     +    +  + +     R        
Sbjct: 166 NQLARNLACEWA-SDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGR-------- 216

Query: 231 TSMVHVDDVARAHIFLL 247
                 ++V+    FL 
Sbjct: 217 --FGEPEEVSSLVAFLC 231

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 38.5 bits (89), Expect = 5e-04
 Identities = 41/273 (15%), Positives = 85/273 (31%), Gaps = 52/273 (19%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           KG    +TGG   +   L+ R +  G  V            ++++ L+ L+   G  + +
Sbjct: 4   KGEAVLITGGASGLGRALVDRFVAEGAKVAVL--------DKSAERLAELETDHG--DNV 53

Query: 64  RIFHADLSHPDGFDAAIA-------------GCTGVLHVATPVDFEDKEPEEVITQRAIN 110
                D+   +    A +                G+   +T +    +E  +       +
Sbjct: 54  LGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFH 113

Query: 111 ----GTLGILKSCLKSGTVKR--VVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW 164
               G +  +K+CL +    R  V++T SNA               F+ +        + 
Sbjct: 114 INVKGYIHAVKACLPALVASRGNVIFTISNAG--------------FYPNGGGPLYTAAK 159

Query: 165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE 224
                + + L    A E A    + +  +    +      P   G    +++ +      
Sbjct: 160 HAIVGLVREL----AFELA--PYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADML 213

Query: 225 YGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYI 257
              L    M  V++   A++F     DA     
Sbjct: 214 KSVLPIGRMPEVEEYTGAYVFFATRGDA--APA 244

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (88), Expect = 6e-04
 Identities = 45/259 (17%), Positives = 78/259 (30%), Gaps = 57/259 (22%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G    VTG    I    +  L   G  V    R+  D           L +L      +
Sbjct: 4   SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD-----------LVSLAKECPGI 52

Query: 64  RIFHADLSHPDGFDAAIAGCTGV------LHVATPVDFEDKEPEEVITQRAINGTLGILK 117
                DL   D  + A+ G   V        +     F +   E      ++N     L+
Sbjct: 53  EPVCVDLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVN-----LR 107

Query: 118 SCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISK----T 173
           S          V+  S                   S +       +   +Y+ +K     
Sbjct: 108 S----------VFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLI-TYSSTKGAMTM 156

Query: 174 LTERAALEFAEEHGLDLVTLIPSMVVGPFIC-----PKFAGSVRSSLALILGNREEYGFL 228
           LT+  A+E    H + + ++ P++V+          P+FA  ++    L    +      
Sbjct: 157 LTKAMAMELG-PHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPL---RK------ 206

Query: 229 LNTSMVHVDDVARAHIFLL 247
                  V+DV  + +FLL
Sbjct: 207 ----FAEVEDVVNSILFLL 221

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 40/249 (16%), Positives = 71/249 (28%), Gaps = 38/249 (15%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G+   VTG    I    +      G S+            R  + L+       A    
Sbjct: 4   SGKTILVTGAASGIGRAALDLFAREGASLVAV--------DREERLLAEAVAALEA--EA 53

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
               AD+S P   +A  A              E+      +   A      +  +     
Sbjct: 54  IAVVADVSDPKAVEAVFAEAL-----------EEFGRLHGVAHFAGVAHSALSWNLPLEA 102

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWG-KSYAISK----TLTERA 178
             K +    + + +        + +         +  L ++G   YA  K     L    
Sbjct: 103 WEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGAFGLAHYAAGKLGVVGLARTL 162

Query: 179 ALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDD 238
           ALE A   G+ +  L+P ++  P        +    +      R              ++
Sbjct: 163 ALELA-RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGR----------AGRPEE 211

Query: 239 VARAHIFLL 247
           VA+A +FLL
Sbjct: 212 VAQAALFLL 220

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 38/256 (14%), Positives = 70/256 (27%), Gaps = 39/256 (15%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           + +V  +TGG G I        + +G  V                    + N  G+ + +
Sbjct: 5   QDKVAIITGGAGGIGETTAKLFVRYGAKVVIA--------DIADDHGQKVCNNIGSPDVI 56

Query: 64  RIFHADLSHPDGFDAAIAGCT---GVLHV---------ATPVDFEDKEPEEVITQRAING 111
              H D++  +     +       G L +          TP    +   E+      IN 
Sbjct: 57  SFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDIN- 115

Query: 112 TLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAIS 171
               +            V   +          +            Y     +  K   + 
Sbjct: 116 ----VYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVY-----TATKHAVLG 166

Query: 172 KTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT 231
             LT     E   E+G+ +  + P +V  P +   F         L        G     
Sbjct: 167 --LTTSLCTELG-EYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKG----- 218

Query: 232 SMVHVDDVARAHIFLL 247
           +++  +DVA A  +L 
Sbjct: 219 TLLRAEDVADAVAYLA 234

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.3 bits (83), Expect = 0.002
 Identities = 21/136 (15%), Positives = 41/136 (30%), Gaps = 2/136 (1%)

Query: 3   EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASER 62
           E + RV V GG G + S  +       + V +    E + E   S  +    +    +++
Sbjct: 1   EAR-RVLVYGGRGALGSRCVQAFRARNWWVASIDVVE-NEEASASVIVKMTDSFTEQADQ 58

Query: 63  LRIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKS 122
           +      L      DA +    G            K  + +  Q     T+    +    
Sbjct: 59  VTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHL 118

Query: 123 GTVKRVVYTSSNAAVF 138
                +    + AA+ 
Sbjct: 119 KEGGLLTLAGAKAALD 134

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 43/278 (15%), Positives = 81/278 (29%), Gaps = 41/278 (14%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
             +   +TG +  I     +     G +VT T RS    E    +    +     + +++
Sbjct: 4   SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLE----ETRQIILKSGVSEKQV 59

Query: 64  RIFHADLSHPDGFDAAIAGCT---GVLH--VATPVDFEDKEPEEVITQRAINGTLGILKS 118
               AD++  DG D  I       G +   V               T + I+     LK 
Sbjct: 60  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 119

Query: 119 CLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAIS--KTLTE 176
            L++      V   +     +       +            + D    + A +     T 
Sbjct: 120 NLQA------VIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTR 173

Query: 177 RAALEFAEEHGLDLVTLIPSMVVGPFICP---------KFAGSVRSSLALILGNREEYGF 227
             A++ A + G+ + ++ P MV   F            KF   + S    I         
Sbjct: 174 STAIDLA-KFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGA----- 227

Query: 228 LLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTI 265
                    + +A   +FL +       YI    ++  
Sbjct: 228 -----AGKPEHIANIILFLAD--RNLSFYI-LGQSIVA 257

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 37/264 (14%), Positives = 69/264 (26%), Gaps = 62/264 (23%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
           + +V  VTG    I   +   L      V    R++   +       S +  +       
Sbjct: 9   ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCD-------SVVDEIKSFGYES 61

Query: 64  RIFHADLSHPDGFDAAIA----------------GCTGVLHVATPVDFEDKEPEEVITQR 107
             +  D+S  +     I                 G T         + E ++        
Sbjct: 62  SGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNS 121

Query: 108 AINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS 167
               T  I K  + +    R++  SS   +  N                          +
Sbjct: 122 LFYITQPISKRMINNRY-GRIINISSIVGLTGNVGQA----------------------N 158

Query: 168 YAISK----TLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE 223
           Y+ SK      T+  A E A    + +  + P  +             ++ ++ I   R 
Sbjct: 159 YSSSKAGVIGFTKSLAKELA-SRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGR- 216

Query: 224 EYGFLLNTSMVHVDDVARAHIFLL 247
                    M   ++VA    FL 
Sbjct: 217 ---------MGTPEEVANLACFLS 231

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 34/263 (12%), Positives = 64/263 (24%), Gaps = 47/263 (17%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G+V   TG    I   + + L   G SV     S              +  L     + 
Sbjct: 5   AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEE------VVAELKKLGAQG 58

Query: 64  RIFHADLSHPDGFDAAIA-------------GCTGVLHVATPVDFEDKEPEEVITQR--- 107
               AD+S P    A                  +G+      ++   +  ++V       
Sbjct: 59  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRG 118

Query: 108 AINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKS 167
                   LK C + G +      ++      N                    L +  K+
Sbjct: 119 QFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPN------------------HALYAGSKA 160

Query: 168 YAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF 227
                      A++     G+ +  + P  V                   +   + + G 
Sbjct: 161 AVEG--FCRAFAVDCG-AKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGL 217

Query: 228 LLNTSM---VHVDDVARAHIFLL 247
                +    +  D+ RA   L 
Sbjct: 218 ANMNPLKRIGYPADIGRAVSALC 240

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (82), Expect = 0.004
 Identities = 36/258 (13%), Positives = 82/258 (31%), Gaps = 48/258 (18%)

Query: 5   KGRVC-VTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERL 63
            G+V  VTGG   I + ++   ++ G  V    + E       S   +  + LPGA    
Sbjct: 5   AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE-------SGGRALEQELPGA---- 53

Query: 64  RIFHADLSHPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG 123
                D++  D     ++                    + +   A +           + 
Sbjct: 54  VFILCDVTQEDDVKTLVSETI-----------RRFGRLDCVVNNAGHHPPPQRPEETSAQ 102

Query: 124 TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGK----SYAISKT----LT 175
             ++++  +           +  + ++  + ++    + + G+     Y  +K     +T
Sbjct: 103 GFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMT 162

Query: 176 ERAALEFAEEHGLDLVTLIPSMVVGPFIC------PKFAGSVRSSLALILGNREEYGFLL 229
           +  AL+ +  +G+ +  + P  +  P         P    S+R  +      R       
Sbjct: 163 KALALDES-PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGR------- 214

Query: 230 NTSMVHVDDVARAHIFLL 247
              M    +V  A +FL 
Sbjct: 215 ---MGQPAEVGAAAVFLA 229

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	285
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	100.0
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	100.0
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	100.0
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	100.0
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	100.0
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	100.0
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	100.0
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	100.0
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	100.0
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	100.0
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	100.0
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	100.0
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	100.0
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	100.0
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	100.0
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.98
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.97
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.97
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.97
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.96
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.95
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.95
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.95
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.95
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.94
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	99.93
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	99.93
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	99.93
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	99.93
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	99.93
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	99.93
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	99.93
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	99.93
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	99.93
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	99.93
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	99.93
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	99.92
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	99.92
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	99.92
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	99.92
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	99.92
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	99.92
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	99.92
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.92
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	99.92
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	99.92
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	99.92
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	99.92
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	99.92
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	99.92
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	99.92
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	99.92
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.91
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	99.91
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	99.91
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	99.91
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	99.91
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	99.9
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	99.9
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	99.9
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	99.9
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	99.9
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	99.9
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	99.9
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	99.9
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	99.9
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	99.9
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	99.9
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	99.9
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.9
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	99.9
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.88
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	99.88
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.87
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.87
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.87
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	99.87
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.86
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	99.86
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.85
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.85
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.83
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.83
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.83
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.82
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.81
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.78
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.76
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.75
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.73
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.71
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.7
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.34
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.76
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	98.68
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	98.67
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.64
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	98.6
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	98.54
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	98.52
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	98.51
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	98.49
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.45
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	98.45
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	98.31
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	98.26
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	98.25
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	98.24
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	98.23
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	98.18
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	98.18
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	98.14
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	98.13
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	98.06
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	98.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.02
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.97
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	97.96
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.88
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.88
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.8
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.8
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.77
d1mb4a1	147	Aspartate beta-semialdehyde dehydrogenase {Vibrio	97.77
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	97.76
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.75
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.73
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.73
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.72
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	97.72
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	97.65
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.64
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.62
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.62
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.6
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.59
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.54
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.42
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.42
d2gz1a1	154	Aspartate beta-semialdehyde dehydrogenase {Strepto	97.39
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	97.33
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	97.33
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	97.32
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	97.31
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.3
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	97.28
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.27
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.27
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	97.26
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	97.25
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.24
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	97.22
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.19
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	97.17
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	97.16
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	97.15
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	97.15
d2g17a1	179	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	97.12
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.1
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	97.07
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	97.07
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.06
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	97.03
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	96.98
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	96.97
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	96.96
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	96.89
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	96.88
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.86
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	96.85
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.85
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.82
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	96.82
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	96.82
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	96.79
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.77
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	96.74
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.73
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	96.67
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	96.67
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	96.66
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	96.63
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	96.63
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	96.62
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	96.62
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.58
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.57
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.56
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.51
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	96.48
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.38
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	96.36
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.35
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.33
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	96.31
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.17
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	96.17
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.16
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	96.15
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	96.12
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.11
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	96.1
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.09
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	96.08
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.08
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.06
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	96.06
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.05
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	95.97
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	95.9
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.89
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	95.81
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	95.74
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	95.71
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.69
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	95.67
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	95.66
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	95.65
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.54
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	95.52
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	95.51
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.5
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	95.48
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	95.38
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	95.37
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	95.37
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	95.36
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.32
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	95.3
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.28
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.27
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	95.23
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	95.23
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.22
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	95.22
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	95.2
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	95.15
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	95.13
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	95.11
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	95.07
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.03
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	95.02
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.01
d2dt5a2	126	Transcriptional repressor Rex, C-terminal domain {	94.95
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	94.85
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	94.84
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	94.82
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	94.69
d1nhpa1	198	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.68
d1d7ya1	183	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.61
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	94.58
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.5
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	94.34
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	94.33
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	94.31
d1kifa1	246	D-aminoacid oxidase, N-terminal domain {Pig (Sus s	94.3
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	94.25
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	94.23
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.2
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.07
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	93.99
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	93.96
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.91
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.86
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	93.8
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.8
d1xhca1	167	NADH oxidase /nitrite reductase {Pyrococcus furios	93.74
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	93.49
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	93.16
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	93.13
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	92.64
d2blna2	203	Polymyxin resistance protein ArnA, N-terminal doma	92.48
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	92.07
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	91.74
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	91.15
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	91.11
d2vapa1	209	Cell-division protein FtsZ {Archaeon Methanococcus	91.06
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.98
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	90.63
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	90.57
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	90.49
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	90.42
d2bw0a2	203	10-formyltetrahydrofolate dehydrogenase domain 1 {	90.34
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.31
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.19
d1fmta2	206	Methionyl-tRNAfmet formyltransferase {Escherichia	90.08
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	89.93
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	89.92
d2bisa1	437	Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI	89.72
d1vjta1	193	Putative alpha-glucosidase TM0752 {Thermotoga mari	89.69
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	89.63
d1n4wa1	367	Cholesterol oxidase of GMC family {Streptomyces sp	89.46
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	89.22
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	89.12
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	89.03
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	88.91
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	88.82
d1w5fa1	194	Cell-division protein FtsZ {Thermotoga maritima [T	88.8
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	88.57
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	88.49
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	87.79
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	87.7
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	87.63
d3coxa1	370	Cholesterol oxidase of GMC family {Brevibacterium	87.36
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	87.25
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	87.09
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	86.81
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	86.36
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	86.19
d1m6ia1	213	Apoptosis-inducing factor (AIF) {Human (Homo sapie	86.18
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	85.58
d1ps9a2	162	2,4-dienoyl-CoA reductase, C-terminal domain {Esch	85.36
d1vkza2	90	Glycinamide ribonucleotide synthetase (GAR-syn), N	85.2
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	84.72
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	84.44
d2gmha1	380	Electron transfer flavoprotein-ubiquinone oxidored	84.25
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.58
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	83.23
d1h9aa1	195	Glucose 6-phosphate dehydrogenase, N-terminal doma	83.07
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	82.76
d1kdga1	360	Flavoprotein domain of flavocytochrome cellobiose	82.59
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	82.42
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	82.35
d1neka2	330	Succinate dehydogenase {Escherichia coli [TaxId: 5	82.32
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	82.07
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	81.84
d1vmea1	148	ROO-like flavoprotein TM0755, C-terminal domain {T	81.68
d1rzua_	477	Glycogen synthase 1, GlgA {Agrobacterium tumefacie	81.64
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	81.44
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	80.33
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.09
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	80.07

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-41  Score=290.63  Aligned_cols=256  Identities=17%  Similarity=0.151  Sum_probs=193.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      |+|||||||||||++|+++|++.|++|++++|....   .+..+...+.. ......+++++.+|++|.+.+.+++++  
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~   78 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS---FNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQ   78 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC------------------------CCEEECCCCSSCHHHHHHHHHHHC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcc---cchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccC
Confidence            789999999999999999999999999999996410   11122222221 122346899999999999999999985  


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCcccccCCCCchhhh
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYI  158 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~  158 (285)
                      +|+|||+|+..+.  ...++. .++++|+.+|.+|+++|++.+  +.++|||+||.++|+.  ....+++|+++.     
T Consensus        79 ~d~v~h~aa~~~~~~~~~~~~-~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~--~~~~~~~E~~~~-----  150 (357)
T d1db3a_          79 PDEVYNLGAMSHVAVSFESPE-YTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGL--VQEIPQKETTPF-----  150 (357)
T ss_dssp             CSEEEECCCCCTTTTTTSCHH-HHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTT--CCSSSBCTTSCC-----
T ss_pred             CCEEEEeecccccchhhhCHH-HHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCC--CCCCCcCCCCCC-----
Confidence            6999999998765  345664 889999999999999999875  2457999999988743  345578898864     


Q ss_pred             hhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-C-ccHHHHHHHHhcCccccc---cccCcce
Q 023244          159 RKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-A-GSVRSSLALILGNREEYG---FLLNTSM  233 (285)
Q Consensus       159 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~-~~~~~~~~~~~~~~~~~~---~~~~~~~  233 (285)
                          .|.++|+.||.++|.+++.+++.++++++++||+++|||...... . .....+.....+....+.   ....++|
T Consensus       151 ----~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~  226 (357)
T d1db3a_         151 ----YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDW  226 (357)
T ss_dssp             ----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECC
T ss_pred             ----CCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecc
Confidence                356889999999999999999889999999999999999754332 1 122233333444443222   3668899


Q ss_pred             eeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHhhCC
Q 023244          234 VHVDDVARAHIFLLEYPDAKGRYIC-SSHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       234 i~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~  277 (285)
                      +|++|+|+++..++++. .++.||+ +++.+|+.|+++.+.+.+|
T Consensus       227 ~~v~D~~~a~~~~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g  270 (357)
T d1db3a_         227 GHAKDYVKMQWMMLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLG  270 (357)
T ss_dssp             EEHHHHHHHHHHTTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTT
T ss_pred             eeechHHHHHHHHHhCC-CCCeEEECCCCceehHHHHHHHHHHhC
Confidence            99999999999999875 4567876 4578999999999999886

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-39  Score=270.66  Aligned_cols=251  Identities=18%  Similarity=0.223  Sum_probs=190.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +|||||||||||||++|+++|+++|++|++++|...       .....+... .....+.+...|+.+.     ++.++|
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~-------~~~~~~~~~-~~~~~~d~~~~~~~~~-----~~~~~d   67 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT-------GRKRNVEHW-IGHENFELINHDVVEP-----LYIEVD   67 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS-------CCGGGTGGG-TTCTTEEEEECCTTSC-----CCCCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCc-------CCHHHHHHh-cCCCceEEEehHHHHH-----HHcCCC
Confidence            479999999999999999999999999999987441       111111111 1123566666666443     456799


Q ss_pred             EEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           85 GVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        85 ~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|||+|+..+.  ...++. ..+++|+.++.+|++++++.+ + ++||+||.++|+..  ...+++|+.+...++    .
T Consensus        68 ~VihlAa~~~~~~~~~~~~-~~~~~Nv~g~~~ll~~~~~~~-~-k~I~~SS~~vy~~~--~~~~~~e~~~~~~~~----~  138 (312)
T d2b69a1          68 QIYHLASPASPPNYMYNPI-KTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYGDP--EVHPQSEDYWGHVNP----I  138 (312)
T ss_dssp             EEEECCSCCSHHHHTTCHH-HHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGBSC--SSSSBCTTCCCBCCS----S
T ss_pred             EEEECcccCCchhHHhCHH-HHHHHHHHHHHHHHHHHHHcC-C-cEEEEEChheecCC--CCCCCCccccCCCCC----C
Confidence            99999998664  234554 889999999999999999988 4 89999999987543  344566655432221    1


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHH-HHHHhcCcccccc--ccCcceeeHHHH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSS-LALILGNREEYGF--LLNTSMVHVDDV  239 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~i~~~D~  239 (285)
                      .|.++|+.||.++|.+++.+++.+|++++++||++||||+........+..+ .....+....+..  ...++|+|++|+
T Consensus       139 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~  218 (312)
T d2b69a1         139 GPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL  218 (312)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHH
Confidence            3568899999999999999999999999999999999998766555555444 3445566554433  567899999999


Q ss_pred             HHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          240 ARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       240 a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++++.+++.. ..+.||++ +...++.++++.+++.++.
T Consensus       219 ~~~~~~~~~~~-~~~~~n~~~~~~~~~~~~~~~i~~~~~~  257 (312)
T d2b69a1         219 VNGLVALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGS  257 (312)
T ss_dssp             HHHHHHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhhc-cCCceEecCCcccchhhHHHHHHHHhCC
Confidence            99999998765 45678765 5789999999999998874

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=100.00  E-value=1.7e-39  Score=273.76  Aligned_cols=251  Identities=24%  Similarity=0.268  Sum_probs=197.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEE------EecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTT------TVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~------~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |||||||||||||++|++.|+++|++|.+      +++..      .......+... ....++.++.+|+.+.......
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~------~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~   73 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLT------YAGNRANLAPV-DADPRLRFVHGDIRDAGLLARE   73 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCC------TTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCC------ccccHhHhhhh-hcCCCeEEEEeccccchhhhcc
Confidence            58999999999999999999999986543      33322      00111111211 2245899999999999999988


Q ss_pred             hcCCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           80 IAGCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                      ...+|.|+|+|+....  ...++ ...+++|+.++.+++++|++.+ +++|||+||.++|+..  ...+++|+++.    
T Consensus        74 ~~~~d~vi~~a~~~~~~~~~~~~-~~~~~~N~~gt~~ll~~~~~~~-~~~~I~~Ss~~~yg~~--~~~~~~E~~~~----  145 (322)
T d1r6da_          74 LRGVDAIVHFAAESHVDRSIAGA-SVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGSI--DSGSWTESSPL----  145 (322)
T ss_dssp             TTTCCEEEECCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCCC--SSSCBCTTSCC----
T ss_pred             ccccceEEeecccccccccccch-HHHhhhhHHHHHHHHHHHHHcC-CceEEEeecceeecCC--CCCCCCCCCCC----
Confidence            8899999999987554  22233 4788999999999999999998 8999999999987654  34577888864    


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHH-HHhcCccccc--cccCccee
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLA-LILGNREEYG--FLLNTSMV  234 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~i  234 (285)
                           .|.++|+.+|.++|.+++.++++++++++++||++||||++...  ..+..+.. ...+.+..+.  +...++|+
T Consensus       146 -----~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i  218 (322)
T d1r6da_         146 -----EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (322)
T ss_dssp             -----CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             -----CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC--cHHHHHHHHHHcCCCcEEecCCCeEEccE
Confidence                 45678999999999999999999999999999999999976442  34444443 4445544433  26688999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|+|+++..+++++..+++||++ ++.+++.|+++.+.+.++.
T Consensus       219 ~v~D~a~ai~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~  263 (322)
T d1r6da_         219 HTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGA  263 (322)
T ss_dssp             EHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTC
T ss_pred             EHHHHHHHHHHHHhCCCCCCeeEEeecccchhHHHHHHHHHHhCC
Confidence            9999999999999998887899865 5689999999999998874

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=2.8e-39  Score=276.33  Aligned_cols=252  Identities=17%  Similarity=0.169  Sum_probs=191.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      |||||||||||||++|+++|++.|++|++. ++..      .......+..+ ....+++++.+|++|++.+..+++  +
T Consensus         1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~------~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~~   73 (361)
T d1kewa_           1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLT------YAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQYQ   73 (361)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCC------TTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCC------ccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhCC
Confidence            589999999999999999999999986554 4432      11112222222 224589999999999999999987  4


Q ss_pred             CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcC--------CccEEEEeccceeeeccCCCC--------
Q 023244           83 CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--------TVKRVVYTSSNAAVFYNDKDV--------  144 (285)
Q Consensus        83 ~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--------~~~~~v~~SS~~~~~~~~~~~--------  144 (285)
                      +|+|||+||..+.  ...++. .++++|+.++.+++++|++.+        .+++|||+||..+|+......        
T Consensus        74 ~d~VihlAa~~~~~~~~~~p~-~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~  152 (361)
T d1kewa_          74 PDAVMHLAAESHVDRSITGPA-AFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTL  152 (361)
T ss_dssp             CSEEEECCSCCCHHHHHHCTH-HHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCC
T ss_pred             CCEEEECccccchhhHHhCHH-HHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCC
Confidence            8999999997654  223554 889999999999999998764        145999999999886553211        


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHH-HHHhcCcc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL-ALILGNRE  223 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~  223 (285)
                      ....|+++         ..|.+.|+.||.++|.+++.+++.++++++++||++||||+...  ...+..+. ....+.+.
T Consensus       153 ~~~~e~~~---------~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~g~~~  221 (361)
T d1kewa_         153 PLFTETTA---------YAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFP--EKLIPLVILNALEGKPL  221 (361)
T ss_dssp             CCBCTTSC---------CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCT--TSHHHHHHHHHHHTCCE
T ss_pred             CCcccCCC---------CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCc--CcHHHHHHHHHHcCCCc
Confidence            11122222         24678899999999999999998899999999999999997543  23444443 34455544


Q ss_pred             ccc--cccCcceeeHHHHHHHHHHhhcCCCCCceEEEec-cccCHHHHHHHHHhhC
Q 023244          224 EYG--FLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSS-HTLTIQEMAEFLSAKY  276 (285)
Q Consensus       224 ~~~--~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~-~~~s~~e~~~~i~~~~  276 (285)
                      .+.  +++.|+|+|++|+|+++..++++...+++||+++ +.+++.|+++.+.+.+
T Consensus       222 ~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~  277 (361)
T d1kewa_         222 PIYGKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLL  277 (361)
T ss_dssp             EEETTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHH
T ss_pred             EEeCCCCeEEeCEEHHHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhc
Confidence            333  2678999999999999999999887778998755 6899999999998754

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=100.00  E-value=1.9e-38  Score=269.84  Aligned_cols=257  Identities=16%  Similarity=0.155  Sum_probs=196.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +||+|||||||||||++|+++|+++|++|.+++++..+.    ......+...  ...+++++.+|++|.+.+..+++..
T Consensus         1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~----~~~~~~~~~~--~~~~i~~~~~Di~d~~~~~~~~~~~   74 (346)
T d1oc2a_           1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTY----AGNKANLEAI--LGDRVELVVGDIADAELVDKLAAKA   74 (346)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCT----TCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHTTC
T ss_pred             CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCc----cccHHHHHHh--hcCCeEEEEccCCCHHHHHHHHhhh
Confidence            478999999999999999999999999877777654211    1111111111  2358999999999999999999999


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC----------CCcccccCC
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK----------DVDMMDETF  151 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~----------~~~~~~e~~  151 (285)
                      +.|+|+|+....  ...++ ..++++|+.++.++++++++.+  .++|++||..+|+..+.          ....++|.+
T Consensus        75 ~~v~~~a~~~~~~~~~~~~-~~~~~~N~~g~~nll~~~~~~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~  151 (346)
T d1oc2a_          75 DAIVHYAAESHNDNSLNDP-SPFIHTNFIGTYTLLEAARKYD--IRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAET  151 (346)
T ss_dssp             SEEEECCSCCCHHHHHHCC-HHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTS
T ss_pred             hhhhhhhhcccccchhhCc-ccceeeehHhHHhhhhhhcccc--ccccccccceEecccCccccccccccCcccccccCC
Confidence            999999987664  22345 3888999999999999999998  68999999988754311          112233333


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--ccc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLL  229 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  229 (285)
                      +         ..|.+.|+.+|.++|.+++.++++++++++++||++||||..... ......+.....+....+.  ...
T Consensus       152 ~---------~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-~~~~~~i~~~~~~~~~~i~~~g~~  221 (346)
T d1oc2a_         152 N---------YNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKN  221 (346)
T ss_dssp             C---------CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCC
T ss_pred             C---------CCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-chhHHHHHHHHcCCceeEeCCCCc
Confidence            2         245688999999999999999988999999999999999864332 1223333344455544333  367


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHhhCCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDAKGRYI-CSSHTLTIQEMAEFLSAKYPEY  279 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~~  279 (285)
                      .++|+|++|+|++++.+++++..++.|+ ++++..++.++++.+.+.++..
T Consensus       222 ~r~~i~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~  272 (346)
T d1oc2a_         222 VRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQP  272 (346)
T ss_dssp             EEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred             cccccchhhHHHHHHHHHhhcccCccccccccccccchHHHHHHHHHhCCC
Confidence            8999999999999999999888888876 5567899999999999988763

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=2.3e-37  Score=264.84  Aligned_cols=257  Identities=17%  Similarity=0.129  Sum_probs=192.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |+ ++|||||||||||||++|+++|+++||+|+++++...      .....       ......+..+|+++.+.+.+++
T Consensus        12 ~~-~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~------~~~~~-------~~~~~~~~~~D~~~~~~~~~~~   77 (363)
T d2c5aa1          12 PS-ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKN------EHMTE-------DMFCDEFHLVDLRVMENCLKVT   77 (363)
T ss_dssp             TT-SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC------SSSCG-------GGTCSEEEECCTTSHHHHHHHH
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCc------cchhh-------hcccCcEEEeechhHHHHHHHh
Confidence            55 5788999999999999999999999999999987651      01111       1125578889999999999999


Q ss_pred             cCCCEEEEecccCCC---CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhh
Q 023244           81 AGCTGVLHVATPVDF---EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDY  157 (285)
Q Consensus        81 ~~~d~vih~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~  157 (285)
                      +++|+|||+|+....   ....+ ......|+.++.++++++++.+ +++||++||..+++....  .+.+|......+ 
T Consensus        78 ~~~d~Vih~a~~~~~~~~~~~~~-~~~~~~n~~gt~~ll~~~~~~~-vk~~i~~SS~~~~~~~~~--~~~~~~~~~~~e-  152 (363)
T d2c5aa1          78 EGVDHVFNLAADMGGMGFIQSNH-SVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQ--LETTNVSLKESD-  152 (363)
T ss_dssp             TTCSEEEECCCCCCCHHHHTTCH-HHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGS--SSSSSCEECGGG-
T ss_pred             hcCCeEeeccccccccccccccc-ccccccccchhhHHHHhHHhhC-cccccccccccccccccc--cccccccccccc-
Confidence            999999999987665   13344 4889999999999999999999 999999999987765532  122222111000 


Q ss_pred             hhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCc-c-HHH-HHHHHh-cCccccc--cccCc
Q 023244          158 IRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAG-S-VRS-SLALIL-GNREEYG--FLLNT  231 (285)
Q Consensus       158 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~-~-~~~-~~~~~~-~~~~~~~--~~~~~  231 (285)
                       ..+..|.++|+.+|.++|.+++.+.+.+|++++++||+++|||........ . ... ...... .......  +...+
T Consensus       153 -~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r  231 (363)
T d2c5aa1         153 -AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  231 (363)
T ss_dssp             -GSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             -CCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEE
Confidence             001245688999999999999999988999999999999999976544222 1 211 222222 2222221  24578


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYIC-SSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|++.++..+++.. .++.||+ ++..+|+.|+++.+.+..+.
T Consensus       232 d~i~v~D~~~~~~~~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~  278 (363)
T d2c5aa1         232 SFTFIDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK  278 (363)
T ss_dssp             CCEEHHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC
T ss_pred             EEeehhHHHHHHHHHHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCC
Confidence            9999999999999999865 5678886 55799999999999998875

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.3e-37  Score=264.26  Aligned_cols=258  Identities=19%  Similarity=0.153  Sum_probs=201.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|||||||||||++|+++|++.|++|++++|...    ..............  ...+++++.+|+.|...+.....
T Consensus        15 ~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~   90 (341)
T d1sb8a_          15 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFAT----GHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA   90 (341)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCC----cchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc
Confidence            4689999999999999999999999999999997441    11111111111111  13478999999999999998888


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      .++.|+|+++....  ...++ ...+++|+.|+.+|+++|++.+ +++|||+||.++|+..  ...+++|+++.      
T Consensus        91 ~~~~v~~~~a~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~~~~~~-~~~~i~~SS~~vyg~~--~~~~~~E~~~~------  160 (341)
T d1sb8a_          91 GVDYVLHQAALGSVPRSINDP-ITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYGDH--PGLPKVEDTIG------  160 (341)
T ss_dssp             TCSEEEECCSCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGTTC--CCSSBCTTCCC------
T ss_pred             cccccccccccccccccccCc-cchhheeehhHHHHHHHHHhcC-CceEEEcccceeeCCC--CCCCccCCCCC------
Confidence            99999999987654  23344 4789999999999999999998 8999999999987543  45578888875      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC--CccHHHH-HHHHhcCcccccc--ccCccee
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF--AGSVRSS-LALILGNREEYGF--LLNTSMV  234 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~-~~~~~~~~~~~~~--~~~~~~i  234 (285)
                         .|.+.|+.+|.++|.+++.+++.++++++++||++||||+..+..  ...+..+ ...+.+.+..+..  ...++|+
T Consensus       161 ---~p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         161 ---KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             ---CCCCcchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence               456889999999999999999889999999999999999765442  3344433 3445565544432  5689999


Q ss_pred             eHHHHHHHHHHhhcCCC--CCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYPD--AKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~--~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|+|.++..++....  .++.||+++ +..|+.|+++.+.+.++.
T Consensus       238 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~  284 (341)
T d1sb8a_         238 YIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAE  284 (341)
T ss_dssp             EHHHHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHH
T ss_pred             EEeccchhhhhhhhccccccceeeeecccccchHHHHHHHHHHHhcc
Confidence            99999999999887653  245787655 689999999999987764

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=4.1e-37  Score=258.90  Aligned_cols=253  Identities=18%  Similarity=0.164  Sum_probs=195.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   83 (285)
                      |+|||||||||||++|+++|+++||+|++++|...      ......+..+. ..++++++.+|++|.+.+...+..  .
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~------~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~   73 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRS------SDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKAQP   73 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS------SCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC------cccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccccc
Confidence            68999999999999999999999999999999761      11223333321 234799999999999999988764  6


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++++|+|+....  ...++ ..+++.|+.++.++++++++.+..++|++.||..++ +. ......+|+++.        
T Consensus        74 ~~~~~~a~~~~~~~~~~~~-~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~-~~-~~~~~~~E~~~~--------  142 (321)
T d1rpna_          74 QEVYNLAAQSFVGASWNQP-VTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMF-GL-IQAERQDENTPF--------  142 (321)
T ss_dssp             SEEEECCSCCCHHHHTTSH-HHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGG-CS-CSSSSBCTTSCC--------
T ss_pred             cccccccccccccccccch-HHHHhhhhhchHHHHHHHHHhCCCcccccccchhhc-Cc-ccCCCCCCCCCc--------
Confidence            788888877664  23445 488999999999999999999856678888887654 32 344566787764        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-C-ccHHHHHHHHhcCcccc--c-cccCcceeeH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-A-GSVRSSLALILGNREEY--G-FLLNTSMVHV  236 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~-~~~~~~~~~~~~~~~~~--~-~~~~~~~i~~  236 (285)
                       .|.+.|+.+|.++|.++..+++.++++++++||+++|||...... . .....+.+...+....+  . ++..++|+|+
T Consensus       143 -~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v  221 (321)
T d1rpna_         143 -YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFA  221 (321)
T ss_dssp             -CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEH
T ss_pred             -cccChhHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEe
Confidence             466889999999999999999889999999999999999654332 1 12233344444554332  2 3667899999


Q ss_pred             HHHHHHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHhhCCC
Q 023244          237 DDVARAHIFLLEYPDAKGRYI-CSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       237 ~D~a~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|+++..+++++.. +.|| .+++..|+.++++.+.+..+.
T Consensus       222 ~D~~~~~~~~~~~~~~-~~~ni~~~~~~s~~~~~~~~~~~~~~  263 (321)
T d1rpna_         222 GDYVEAMWLMLQQDKA-DDYVVATGVTTTVRDMCQIAFEHVGL  263 (321)
T ss_dssp             HHHHHHHHHHHHSSSC-CCEEECCSCEEEHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHhcCCc-CCceecccccceehhhhHHHHHHhCC
Confidence            9999999999988754 5566 456799999999999998875

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-37  Score=260.43  Aligned_cols=258  Identities=19%  Similarity=0.134  Sum_probs=192.0

Q ss_pred             CeE-EEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC--CCCCCEEEEecCCCChhhHHHHhc-
Q 023244            6 GRV-CVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP--GASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         6 k~i-lVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ||| ||||||||||++|+++|+++||+|++++|....   .+......+....  ....+++++.+|++|.+.+.++++ 
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   77 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSS---FNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE   77 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS---CCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcc---cchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh
Confidence            577 999999999999999999999999999996511   1111122211111  123578999999999999999986 


Q ss_pred             -CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcC--CccEEEEeccceeeeccCCCCcccccCCCCchh
Q 023244           82 -GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSG--TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVD  156 (285)
Q Consensus        82 -~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~  156 (285)
                       ++++++|+++....  ...++ ..++++|+.+|.++++++++.+  +.++|||+||.++|+.  ....+++|+++.   
T Consensus        78 ~~~~~v~~~~a~~~~~~~~~~~-~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~--~~~~~~~E~~~~---  151 (347)
T d1t2aa_          78 VKPTEIYNLGAQSHVKISFDLA-EYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGK--VQEIPQKETTPF---  151 (347)
T ss_dssp             HCCSEEEECCSCCCHHHHHHSH-HHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCS--CSSSSBCTTSCC---
T ss_pred             cccceeeeeeeccccchhhccc-hhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecC--CCCCCCCCCCCC---
Confidence             47899999987654  22344 4778999999999999999876  2458999999998753  344578888874   


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC--ccHHHHHHHHhcCc-cccc--cccCc
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSVRSSLALILGNR-EEYG--FLLNT  231 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~~~~~~-~~~~--~~~~~  231 (285)
                            .|.++|+.||.++|.+++.+++.++++++++||+++|||.......  .....+.....+.. ....  +...+
T Consensus       152 ------~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r  225 (347)
T d1t2aa_         152 ------YPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  225 (347)
T ss_dssp             ------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCccee
Confidence                  4678899999999999999998899999999999999996544321  12222333333333 2222  25678


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      +|+|++|+++++..++++......+...+...++.+....+...+++
T Consensus       226 ~~i~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (347)
T d1t2aa_         226 DWGHAKDYVEAMWLMLQNDEPEDFVIATGEVHSVREFVEKSFLHIGK  272 (347)
T ss_dssp             CCEEHHHHHHHHHHHHHSSSCCCEEECCSCCEEHHHHHHHHHHHTTC
T ss_pred             eeeEecHHHHHHHHHhhcCCCccceeccccccccchhhhhhhhhhcc
Confidence            99999999999999999875543334556788999999988887765

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.1e-37  Score=259.70  Aligned_cols=255  Identities=18%  Similarity=0.202  Sum_probs=188.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |||||||||||||++|+++|+++|++|++++|...    ............  ...++.++++|++|.+.+.++++  ++
T Consensus         1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~----~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~~~   74 (338)
T d1udca_           1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCN----SKRSVLPVIERL--GGKHPTFVEGDIRNEALMTEILHDHAI   74 (338)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTTHHHHHHHH--HTSCCEEEECCTTCHHHHHHHHHHTTC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCC----cchhhHHHHHhh--cCCCCEEEEeecCCHHHHHHHHhccCC
Confidence            57999999999999999999999999999987431    001111111111  12378999999999999999997  69


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+||..+.  ...++. ..+++|+.++++++++|++.+ +++||++||.++|+...  ..+..|+++.        
T Consensus        75 d~ViHlAa~~~~~~~~~~~~-~~~~~Nv~gt~nlL~~~~~~~-v~~~i~~Ss~~vy~~~~--~~~~~e~~~~--------  142 (338)
T d1udca_          75 DTVIHFAGLKAVGESVQKPL-EYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYGDQP--KIPYVESFPT--------  142 (338)
T ss_dssp             SEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCSCC--SSSBCTTSCC--------
T ss_pred             CEEEECCCccchhhHHhCHH-HHHHhHHHHHHHHHHHHHHhC-CCEEEecCcceEEcccc--cccccccccc--------
Confidence            999999997654  223554 889999999999999999998 99999999998775442  2233333321        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcCccccc------
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREEYG------  226 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~------  226 (285)
                      ..|.++|+.+|.++|.++.++..+. +++++++||+++|||.....        ....+..+.....+...++.      
T Consensus       143 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~  222 (338)
T d1udca_         143 GTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred             CCCcchHHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence            2467889999999999998777664 89999999999999865432        12344445454444332211      


Q ss_pred             ----cccCcceeeHHHHHHHHHHhhcC---CCCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          227 ----FLLNTSMVHVDDVARAHIFLLEY---PDAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       227 ----~~~~~~~i~~~D~a~~~~~~~~~---~~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                          ....++|+|++|++.+...+...   .....+||+++ +.+|+.|+++.+.+.+|.
T Consensus       223 ~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~  282 (338)
T d1udca_         223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK  282 (338)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTS
T ss_pred             ccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCC
Confidence                24468999999999877776653   22334688765 679999999999998874

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=100.00  E-value=5.3e-37  Score=260.49  Aligned_cols=269  Identities=27%  Similarity=0.369  Sum_probs=197.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh---cCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK---NLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|+|||||||||||++|+++|+++|++|++++|+.        ++...+.   ...........+.+|+.|.+.+.+++
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~--------~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA--------SKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCc--------hhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            468999999999999999999999999999999976        2222221   11122234556789999999999999


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC-C-CcccccCCCCchhh-
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK-D-VDMMDETFWSDVDY-  157 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~-~-~~~~~e~~~~~~~~-  157 (285)
                      .++|+|+|+++..... .++ ..++..|+.+|.+++++|++.+.+++|||+||..++++..+ . ....+|+.+..... 
T Consensus        82 ~~~~~v~~~a~~~~~~-~~~-~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~  159 (342)
T d1y1pa1          82 KGAAGVAHIASVVSFS-NKY-DEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESID  159 (342)
T ss_dssp             TTCSEEEECCCCCSCC-SCH-HHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHH
T ss_pred             ccchhhhhhccccccc-ccc-cccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccccccc
Confidence            9999999999987764 333 47889999999999999998755999999999876544332 2 22334443322111 


Q ss_pred             ------hhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCC-ccHHHHHHH-HhcCccc-cc
Q 023244          158 ------IRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFA-GSVRSSLAL-ILGNREE-YG  226 (285)
Q Consensus       158 ------~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~-~~~~~~~~~-~~~~~~~-~~  226 (285)
                            ...+..|.++|+.+|..+|.+++.+++.+  +++++++||+.+|||...+... .....+... ..+.... ..
T Consensus       160 ~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~  239 (342)
T d1y1pa1         160 KAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALA  239 (342)
T ss_dssp             HHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHH
T ss_pred             ccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccC
Confidence                  01112345689999999999999998776  4778899999999996544332 233333333 3333322 22


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCCCCceE-EEeccccCHHHHHHHHHhhCCCCCCC
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPDAKGRY-ICSSHTLTIQEMAEFLSAKYPEYPIP  282 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~-~~~~~~~s~~e~~~~i~~~~~~~~~~  282 (285)
                      ....++|+|++|+|.+++.+++++...+.| +++++.+|+.|+++.|.+.+|...+|
T Consensus       240 ~~~~~~~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~  296 (342)
T d1y1pa1         240 LMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFP  296 (342)
T ss_dssp             TCCSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCC
T ss_pred             CccceeeeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCC
Confidence            366789999999999999999988777765 46678999999999999998765554

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-36  Score=263.12  Aligned_cols=271  Identities=13%  Similarity=0.122  Sum_probs=186.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC---------CCccccCccchhhhhcCCC-CCCCEEEEecCCCChh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE---------LDPEHRNSKDLSFLKNLPG-ASERLRIFHADLSHPD   74 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~   74 (285)
                      +|||||||||||||++|+++|+++||+|++++.-.         .............+..... ...+++++.+|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            47999999999999999999999999999997210         0000000011111110000 1247899999999999


Q ss_pred             hHHHHhcC--CCEEEEecccCCC--CCC--ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC----C
Q 023244           75 GFDAAIAG--CTGVLHVATPVDF--EDK--EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD----V  144 (285)
Q Consensus        75 ~~~~~~~~--~d~vih~a~~~~~--~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~----~  144 (285)
                      .+.+++++  +|+|||+||....  +..  .....+++.|+.++.+++++|++.+..+++++.||..+++.....    .
T Consensus        81 ~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~  160 (393)
T d1i24a_          81 FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGY  160 (393)
T ss_dssp             HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSE
T ss_pred             HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccccccccccccccc
Confidence            99999974  7999999997653  111  222367899999999999999998845577888877655433210    1


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC---------------CCc
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK---------------FAG  209 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~---------------~~~  209 (285)
                      ...+++....  ....+..|.++|+.||.++|.++..++++++++++++||+++|||+....               ...
T Consensus       161 ~~~~~~~~~~--~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~  238 (393)
T d1i24a_         161 ITITHNGRTD--TLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGT  238 (393)
T ss_dssp             EEEEETTEEE--EEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCC
T ss_pred             cccccccccc--ccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccccccccccccc
Confidence            1111111100  00011345678999999999999999999999999999999999864321               112


Q ss_pred             cHHHH-HHHHhcCcccccc--ccCcceeeHHHHHHHHHHhhcCCCCCceE---EEeccccCHHHHHHHHHhhCC
Q 023244          210 SVRSS-LALILGNREEYGF--LLNTSMVHVDDVARAHIFLLEYPDAKGRY---ICSSHTLTIQEMAEFLSAKYP  277 (285)
Q Consensus       210 ~~~~~-~~~~~~~~~~~~~--~~~~~~i~~~D~a~~~~~~~~~~~~~~~~---~~~~~~~s~~e~~~~i~~~~~  277 (285)
                      .+..+ .....+.+..+..  ...|+|+|++|+|+++..++++....+.+   +.+++.+|+.|+++.+.+..+
T Consensus       239 ~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~  312 (393)
T d1i24a_         239 ALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGS  312 (393)
T ss_dssp             HHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred             chhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHH
Confidence            23333 3445555544432  55789999999999999999987776653   345578999999999888643

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8.8e-36  Score=252.93  Aligned_cols=254  Identities=20%  Similarity=0.266  Sum_probs=188.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH-HhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA-AIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~   83 (285)
                      |||||||||||||++|+++|+++| ++|+++++..        .....+.+    .++++++.+|+++.+.+.+ +.+++
T Consensus         1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~--------~~~~~~~~----~~~~~~i~~Di~~~~~~~~~~~~~~   68 (342)
T d2blla1           1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGS--------DAISRFLN----HPHFHFVEGDISIHSEWIEYHVKKC   68 (342)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCC--------GGGGGGTT----CTTEEEEECCTTTCSHHHHHHHHHC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCC--------cchhhhcc----CCCeEEEECccCChHHHHHHHHhCC
Confidence            589999999999999999999998 4899998865        22222222    2489999999998876655 66779


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ...++ ...++.|+.++.++++++.+.+  .+++++||..+|+.....  ..+|..+..  ...+.
T Consensus        69 d~Vih~a~~~~~~~~~~~~-~~~~~~nv~gt~~ll~~~~~~~--~~~~~~ss~~~~~~~~~~--~~~~~~~~~--~~~~~  141 (342)
T d2blla1          69 DVVLPLVAIATPIEYTRNP-LRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYGMCSDK--YFDEDHSNL--IVGPV  141 (342)
T ss_dssp             SEEEECBCCCCHHHHHHSH-HHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGBTCCCS--SBCTTTCCC--BCCCT
T ss_pred             CccccccccccccccccCC-cccccccccccccccccccccc--cccccccccccccccccc--ccccccccc--ccccc
Confidence            999999998665  22334 3789999999999999999988  577788988877655332  222222111  01122


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC------CccHH-HHHHHHhcCcccccc--ccCcc
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF------AGSVR-SSLALILGNREEYGF--LLNTS  232 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~------~~~~~-~~~~~~~~~~~~~~~--~~~~~  232 (285)
                      ..|.+.|+.||.++|.++..+++.+|++++++||+.+|||......      ..... .+...+.+.+..+..  ...++
T Consensus       142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~  221 (342)
T d2blla1         142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC  221 (342)
T ss_dssp             TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred             CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeee
Confidence            3466789999999999999999989999999999999998644321      11222 334455666654443  66889


Q ss_pred             eeeHHHHHHHHHHhhcCCC---CCceEEEe-cc-ccCHHHHHHHHHhhCCC
Q 023244          233 MVHVDDVARAHIFLLEYPD---AKGRYICS-SH-TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       233 ~i~~~D~a~~~~~~~~~~~---~~~~~~~~-~~-~~s~~e~~~~i~~~~~~  278 (285)
                      |+|++|+|+++..+++++.   .+.+||++ ++ .+|+.|+++.+.+.++.
T Consensus       222 ~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~  272 (342)
T d2blla1         222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEK  272 (342)
T ss_dssp             CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHT
T ss_pred             ecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCC
Confidence            9999999999999998753   23479875 44 58999999999987654

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-35  Score=251.62  Aligned_cols=258  Identities=17%  Similarity=0.150  Sum_probs=191.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|++||||||||||++|+++|+++||+|++++|....   .+..+...+.....  ....+.++.+|+++.+.+...++ 
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~   77 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN---FNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV   77 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS---CCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcc---cchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh
Confidence            4799999999999999999999999999999996510   01112222221111  13468899999999999998886 


Q ss_pred             -CCCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcC----CccEEEEeccceeeeccCCCCcccccCCCCc
Q 023244           82 -GCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSG----TVKRVVYTSSNAAVFYNDKDVDMMDETFWSD  154 (285)
Q Consensus        82 -~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~  154 (285)
                       ++|+|||+|+.....  ..++ ...+..|+.++.++++++++..    ...++++.||..++.   .....++|+++. 
T Consensus        78 ~~~D~Vih~Aa~~~~~~~~~~p-~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~---~~~~~~~E~~~~-  152 (339)
T d1n7ha_          78 IKPDEVYNLAAQSHVAVSFEIP-DYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFG---STPPPQSETTPF-  152 (339)
T ss_dssp             HCCSEEEECCSCCCHHHHHHSH-HHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGT---TSCSSBCTTSCC-
T ss_pred             hccchhhhccccccccccccCc-cccccccccccchhhhhhhhcccccccceeeeecccceecc---cCCCCCCCCCCC-
Confidence             579999999986652  2345 3888999999999999987642    134677777765432   234567888864 


Q ss_pred             hhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccH-HHHHHHHhcCc-cccc--ccc
Q 023244          155 VDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSV-RSSLALILGNR-EEYG--FLL  229 (285)
Q Consensus       155 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~-~~~~~~~~~~~-~~~~--~~~  229 (285)
                              .|.+.|+.+|.++|.++..+++.++++++++||++||||...... ...+ ........+.. ..+.  ...
T Consensus       153 --------~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~  224 (339)
T d1n7ha_         153 --------HPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQA  224 (339)
T ss_dssp             --------CCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTC
T ss_pred             --------CCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCc
Confidence                    467889999999999999999989999999999999999754332 1111 22223333333 2222  256


Q ss_pred             CcceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHhhCCC
Q 023244          230 NTSMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       230 ~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      .++|+|++|+|+++..+++++...+.++..+...++.++++.+.+.++.
T Consensus       225 ~rd~~~v~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~  273 (339)
T d1n7ha_         225 SRDWGFAGDYVEAMWLMLQQEKPDDYVVATEEGHTVEEFLDVSFGYLGL  273 (339)
T ss_dssp             EEECEEHHHHHHHHHHHHTSSSCCEEEECCSCEEEHHHHHHHHHHHTTC
T ss_pred             cccceeeehHHHHHHHHHhcCCCCccccccccccccchhhhhhhhhhhc
Confidence            8899999999999999999887666677788899999999999998875

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-35  Score=250.47  Aligned_cols=259  Identities=18%  Similarity=0.174  Sum_probs=188.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc--cCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      |||||||||||||++|+++|++.|++|++++|.......  ...+....+...  ...++.++.+|++|.+.+.+++.+ 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~l~~~~~~~   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--TGRSVEFEEMDILDQGALQRLFKKY   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--HTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh--cCCCcEEEEeecccccccccccccc
Confidence            699999999999999999999999999999863210000  011111211211  134789999999999999998864 


Q ss_pred             -CCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           83 -CTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        83 -~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                       +++++|+||..+.  ...++. ..++.|+.++.++++++++.+ +++||++||..+++....... ..+...       
T Consensus        81 ~~~~i~h~Aa~~~~~~~~~~p~-~~~~~Nv~gt~~l~~~~~~~~-v~~~i~~ss~~~~~~~~~~~~-~~~~~~-------  150 (346)
T d1ek6a_          81 SFMAVIHFAGLKAVGESVQKPL-DYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYGNPQYLPL-DEAHPT-------  150 (346)
T ss_dssp             CEEEEEECCSCCCHHHHHHCHH-HHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGCSCSSSSB-CTTSCC-------
T ss_pred             ccccccccccccCcHhhHhCHH-HHHHhhhcccccccchhhhcC-cccccccccceeeeccccccc-cccccc-------
Confidence             6789999998664  233554 789999999999999999999 999999999998766533222 221111       


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHH-cCCcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcCcccc-----
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEE-HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREEY-----  225 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~-~~i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~-----  225 (285)
                        ..+.++|+.+|..+|..+.++++. .+++.+++||+++|||.....        ....+..+.....+....+     
T Consensus       151 --~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~  228 (346)
T d1ek6a_         151 --GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN  228 (346)
T ss_dssp             --CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             --cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCC
Confidence              245678999999999999998766 489999999999999864321        1223444444444333221     


Q ss_pred             ----c-cccCcceeeHHHHHHHHHHhhcCC---CCCceEEEec-cccCHHHHHHHHHhhCCC
Q 023244          226 ----G-FLLNTSMVHVDDVARAHIFLLEYP---DAKGRYICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       226 ----~-~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                          . ....|+|+|++|+|.++..++...   ....+||+++ ..+++.|+++.+.+.++.
T Consensus       229 ~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~  290 (346)
T d1ek6a_         229 DYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK  290 (346)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS
T ss_pred             cccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCC
Confidence                1 244689999999999988876432   2334788655 689999999999998875

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=7.7e-35  Score=247.58  Aligned_cols=256  Identities=18%  Similarity=0.209  Sum_probs=191.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |.|||||||||||++|+++|+++|++|+++++...    ............  ...+++++.+|++|.+.++.+++  ++
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~----~~~~~~~~~~~~--~~~~v~~~~~Dl~d~~~l~~~~~~~~~   75 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSN----STYDSVARLEVL--TKHHIPFYEVDLCDRKGLEKVFKEYKI   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS----CCTHHHHHHHHH--HTSCCCEEECCTTCHHHHHHHHHHSCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCC----cchhHHHhHHhh--cccCCeEEEeecCCHHHHHHHHhccCC
Confidence            57999999999999999999999999999986431    000111111111  12378899999999999999887  68


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCC--CCcccccCCCCchhhhh
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDK--DVDMMDETFWSDVDYIR  159 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~--~~~~~~e~~~~~~~~~~  159 (285)
                      |+|||+||....  ...++ ..+..+|+.++.+|+++|++.+ +++||++||..+|+....  ...+++|+.+.      
T Consensus        76 d~VihlAa~~~~~~~~~~~-~~~~~~N~~~t~~ll~~~~~~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~------  147 (347)
T d1z45a2          76 DSVIHFAGLKAVGESTQIP-LRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEECPL------  147 (347)
T ss_dssp             CEEEECCSCCCHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCC------
T ss_pred             CEEEEccccccccccccCc-ccccccchhhhHHHHHHHHhcc-cceEEeecceeeecCcccCCCCCccccccCC------
Confidence            999999998764  23344 4888999999999999999998 999999999998865432  33456666653      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHH--cCCcEEEeccCceecCCCCCC--------CCccHHHHHHHHhcCcccccc--
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEE--HGLDLVTLIPSMVVGPFICPK--------FAGSVRSSLALILGNREEYGF--  227 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~--~~i~~~i~Rp~~v~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~--  227 (285)
                         .|.++|+.||.++|.+++++.+.  .+++++++||+++||+.....        ....+..+.....+...++..  
T Consensus       148 ---~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g  224 (347)
T d1z45a2         148 ---GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFG  224 (347)
T ss_dssp             ---CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-
T ss_pred             ---CCCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeC
Confidence               45688999999999999998764  479999999999999754322        123455555555444432211  


Q ss_pred             --------ccCcceeeHHHHHHHHHHhhcCC-------CCCceEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          228 --------LLNTSMVHVDDVARAHIFLLEYP-------DAKGRYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 --------~~~~~~i~~~D~a~~~~~~~~~~-------~~~~~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                              ...+|++++.|.+.+++.+++..       .....||++ ++++|+.|+++.+.+.++.
T Consensus       225 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~  291 (347)
T d1z45a2         225 DDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI  291 (347)
T ss_dssp             -----CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             CCccccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCC
Confidence                    23578999999999888887531       123468875 5789999999999998875

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.8e-35  Score=245.57  Aligned_cols=240  Identities=17%  Similarity=0.137  Sum_probs=181.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      +|||||||||||||++|+++|+++|+.|+++++..                           ..|+.|.+.+.++++  .
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~---------------------------~~~~~~~~~~~~~~~~~~   54 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------ELNLLDSRAVHDFFASER   54 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------TCCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch---------------------------hccccCHHHHHHHHhhcC
Confidence            67999999999999999999999999988776544                           268999999988886  4


Q ss_pred             CCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           83 CTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        83 ~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      +|.|+|+|+.....  .......+++.|+.+|.+|+++|++.+ +++|||+||.++|+..  ...+++|+.+....+   
T Consensus        55 ~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~-v~~~i~~SS~~vyg~~--~~~~~~E~~~~~~~~---  128 (315)
T d1e6ua_          55 IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYPKL--AKQPMAESELLQGTL---  128 (315)
T ss_dssp             CSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSCTT--CCSSBCGGGTTSSCC---
T ss_pred             CCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCceEcCCC--CCCCccCCccccCCC---
Confidence            89999999876541  112224778899999999999999998 9999999999987654  344667766543221   


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC--ccHHHH-----HH-HHhcCcccccc--ccC
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA--GSVRSS-----LA-LILGNREEYGF--LLN  230 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~-----~~-~~~~~~~~~~~--~~~  230 (285)
                       .++.++|+.||.++|.+++.+++++|++++++||++||||+......  ......     .. ...+.......  ...
T Consensus       129 -~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~  207 (315)
T d1e6ua_         129 -EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPM  207 (315)
T ss_dssp             -CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCE
T ss_pred             -CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceE
Confidence             23456799999999999999998899999999999999997654322  111111     11 22222222222  446


Q ss_pred             cceeeHHHHHHHHHHhhcCCC---------CCceEEE-eccccCHHHHHHHHHhhCCC
Q 023244          231 TSMVHVDDVARAHIFLLEYPD---------AKGRYIC-SSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~---------~~~~~~~-~~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++|+|++|++.++..++.+..         ..+.++. .+...++.++++.+.+.++.
T Consensus       208 ~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~  265 (315)
T d1e6ua_         208 REFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGY  265 (315)
T ss_dssp             ECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTC
T ss_pred             EEEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCC
Confidence            899999999999999986642         1234664 55789999999999988764

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=100.00  E-value=6.9e-34  Score=244.79  Aligned_cols=263  Identities=21%  Similarity=0.211  Sum_probs=186.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCC-----CccccCccchhhhhcC-----CCCCCCEEEEecCCCCh
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSEL-----DPEHRNSKDLSFLKNL-----PGASERLRIFHADLSHP   73 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~-----~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~Dl~d~   73 (285)
                      .|||||||||||||++|+++|++ .|++|+++++-..     ............+...     ......+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            46999999999999999999986 6899999985110     0000001111111111     11245688999999999


Q ss_pred             hhHHHHhc---CCCEEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCC-----
Q 023244           74 DGFDAAIA---GCTGVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKD-----  143 (285)
Q Consensus        74 ~~~~~~~~---~~d~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~-----  143 (285)
                      +.++++++   .+|+|||+|+.....  ...+ ...++.|+.++.++++++++.+ +++++++||..++......     
T Consensus        82 ~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~-~~~~~~N~~~t~~~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~  159 (383)
T d1gy8a_          82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDP-LKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTN  159 (383)
T ss_dssp             HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----C
T ss_pred             HHhhhhhhccceeehhhccccccccccccccc-ccccccccccccccchhhhccC-Cccccccccccccccccccccccc
Confidence            99999886   469999999986651  2233 4788999999999999999998 8999999999876544322     


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCC-------ccHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFA-------GSVRSSLA  216 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~-------~~~~~~~~  216 (285)
                      ..++.|+++         ..|.++|+.+|.++|.+++.+.+.+|++++++||+++|||.......       ..++.+..
T Consensus       160 ~~~~~e~~~---------~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~  230 (383)
T d1gy8a_         160 AEPIDINAK---------KSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILG  230 (383)
T ss_dssp             CCCBCTTSC---------CBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHH
T ss_pred             ccccccccC---------CCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHH
Confidence            223444443         24678899999999999999998899999999999999998765422       12222211


Q ss_pred             HHh-----------------cCcccc-------c-cccCcceeeHHHHHHHHHHhhcCC---------CCCceEEEe-cc
Q 023244          217 LIL-----------------GNREEY-------G-FLLNTSMVHVDDVARAHIFLLEYP---------DAKGRYICS-SH  261 (285)
Q Consensus       217 ~~~-----------------~~~~~~-------~-~~~~~~~i~~~D~a~~~~~~~~~~---------~~~~~~~~~-~~  261 (285)
                      ...                 +.+...       . +.+.|+|+|++|+|+++..+++..         ...++||++ ++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~  310 (383)
T d1gy8a_         231 RVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSR  310 (383)
T ss_dssp             HHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSC
T ss_pred             HHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCC
Confidence            111                 111110       0 133579999999999999988631         123468875 57


Q ss_pred             ccCHHHHHHHHHhhCCC
Q 023244          262 TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       262 ~~s~~e~~~~i~~~~~~  278 (285)
                      .+|+.|+++.+.+.++.
T Consensus       311 ~~s~~el~~~i~~~~~~  327 (383)
T d1gy8a_         311 GYSVREVIEVARKTTGH  327 (383)
T ss_dssp             CEEHHHHHHHHHHHHCC
T ss_pred             ceeHHHHHHHHHHHhCC
Confidence            89999999999998774

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=100.00  E-value=1.7e-32  Score=233.69  Aligned_cols=255  Identities=18%  Similarity=0.158  Sum_probs=189.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|||||||||||||++|+++|+++|++|++++|+..     ....  .+.. ....++++++.+|++|++.+.++++  
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~-----~~~~--~~~~-~~~~~~i~~~~~Dl~d~~~l~~~~~~~   78 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAP-----TVPS--LFET-ARVADGMQSEIGDIRDQNKLLESIREF   78 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCS-----SSSC--HHHH-TTTTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC-----ccHH--HHhh-hhcccCCeEEEeeccChHhhhhhhhhc
Confidence            4689999999999999999999999999999999772     1111  1111 1223479999999999999999887  


Q ss_pred             CCCEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhh
Q 023244           82 GCTGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIR  159 (285)
Q Consensus        82 ~~d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~  159 (285)
                      .+|+|+|+|+....  ....+ ...+.+|+.++.++++++++.+....+++.||. .++.......+.+|+.+.      
T Consensus        79 ~~~~v~~~aa~~~~~~~~~~~-~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~-~~~~~~~~~~~~~~~~~~------  150 (356)
T d1rkxa_          79 QPEIVFHMAAQPLVRLSYSEP-VETYSTNVMGTVYLLEAIRHVGGVKAVVNITSD-KCYDNKEWIWGYRENEAM------  150 (356)
T ss_dssp             CCSEEEECCSCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCG-GGBCCCCSSSCBCTTSCB------
T ss_pred             hhhhhhhhhccccccccccCC-ccccccccccchhhhhhhhcccccccccccccc-cccccccccccccccccc------
Confidence            47999999997654  22344 488999999999999999998735555555554 455555566667776653      


Q ss_pred             hcCCCCchhHhhHHHHHHHHHHHHHH---------cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cc
Q 023244          160 KLDSWGKSYAISKTLTERAALEFAEE---------HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FL  228 (285)
Q Consensus       160 ~~~~~~~~Y~~sK~~~E~~~~~~~~~---------~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  228 (285)
                         .|.++|+.+|...|..+..++.+         .++.++++||+++|||++... ..++..+.....+....+.  ..
T Consensus       151 ---~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~~~i~~~~~~~~~~~~~~~~~~~  226 (356)
T d1rkxa_         151 ---GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPH  226 (356)
T ss_dssp             ---CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTT
T ss_pred             ---CCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchh-hHHHHHHHHHHhCCCceEEeecc
Confidence               45688999999999988876653         468899999999999976442 3445555555555544333  26


Q ss_pred             cCcceeeHHHHHHHHHHhhcCCCCC-----ceEEE---eccccCHHHHHHHHHhhCCC
Q 023244          229 LNTSMVHVDDVARAHIFLLEYPDAK-----GRYIC---SSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       229 ~~~~~i~~~D~a~~~~~~~~~~~~~-----~~~~~---~~~~~s~~e~~~~i~~~~~~  278 (285)
                      ..++|+|++|+|.++..++.+....     ...+.   .+..+++.++++.+.+.++.
T Consensus       227 ~~~~~~~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~  284 (356)
T d1rkxa_         227 AIRPWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE  284 (356)
T ss_dssp             CEECCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT
T ss_pred             ccccccccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCC
Confidence            6889999999999999988764322     12222   23478999999999998864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.98  E-value=6.3e-32  Score=228.24  Aligned_cols=263  Identities=17%  Similarity=0.187  Sum_probs=185.2

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--CC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--CT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d   84 (285)
                      ||||||||||||++|+++|+++|++|+++++-...   ...+....+..    ..+++++.+|++|.+.+.+++++  +|
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~---~~~~~~~~~~~----~~~~~~i~~Di~~~~~l~~~~~~~~~d   74 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRK---GATDNLHWLSS----LGNFEFVHGDIRNKNDVTRLITKYMPD   74 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCST---THHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcc---cchhHHHHhhc----cCCcEEEEcccCCHHHHHHHHHhcCCc
Confidence            79999999999999999999999999998753200   00111122222    24789999999999999999875  69


Q ss_pred             EEEEecccCCCC--CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCc------hh
Q 023244           85 GVLHVATPVDFE--DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSD------VD  156 (285)
Q Consensus        85 ~vih~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~------~~  156 (285)
                      +|||+|+.....  ..++ ...+++|+.||.+|++++.+.+ ++++|+.||..+++...........+....      ..
T Consensus        75 ~Vih~aa~~~~~~~~~~~-~~~~~~Nv~gt~nll~~~~~~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  152 (338)
T d1orra_          75 SCFHLAGQVAMTTSIDNP-CMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGY  152 (338)
T ss_dssp             EEEECCCCCCHHHHHHCH-HHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCB
T ss_pred             eEEeecccccccccccCh-HHHHHHHHHHHHHHHHhhhccc-ccccccccccccccccccccccccccccccccccccCc
Confidence            999999987652  2344 4889999999999999999998 777777777666655533221111111000      00


Q ss_pred             hhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCC-CccHHHHHH----HHhcCc--cccc--c
Q 023244          157 YIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKF-AGSVRSSLA----LILGNR--EEYG--F  227 (285)
Q Consensus       157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~-~~~~~~~~~----~~~~~~--~~~~--~  227 (285)
                      .......+.+.|+.+|...|.++....+.+++...++|+.++|++...... ......+..    ...+..  ..+.  +
T Consensus       153 ~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  232 (338)
T d1orra_         153 DESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNG  232 (338)
T ss_dssp             CTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSS
T ss_pred             ccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCC
Confidence            000112356789999999999999999889999999999999987654432 223333222    222222  2222  2


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCC--CCceEEEe---ccccCHHHHHHHHHhhCCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPD--AKGRYICS---SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~~~~---~~~~s~~e~~~~i~~~~~~  278 (285)
                      ...++|+|++|++++++.++++..  .+.+|++.   +..+++.|+++.+.+.++.
T Consensus       233 ~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~  288 (338)
T d1orra_         233 KQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNI  288 (338)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTC
T ss_pred             ceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCC
Confidence            457899999999999999997643  34567753   3478999999999998764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.97  E-value=2.6e-31  Score=218.95  Aligned_cols=221  Identities=11%  Similarity=0.025  Sum_probs=175.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--CC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--GC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~   83 (285)
                      |||||||||||||++|+++|.++||+|++++|+.                            +|++|.+.++++++  ++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------~D~~d~~~~~~~l~~~~~   53 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------LDITNVLAVNKFFNEKKP   53 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------CCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------ccCCCHHHHHHHHHHcCC
Confidence            6799999999999999999999999999999876                            68999999999987  57


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+|+....  ....+ ......|+....++.+.+....  ..++++||..+++..  ...+.+|.++.        
T Consensus        54 d~vih~a~~~~~~~~~~~~-~~~~~~n~~~~~~~~~~~~~~~--~~~~~~ss~~v~~~~--~~~~~~e~~~~--------  120 (281)
T d1vl0a_          54 NVVINCAAHTAVDKCEEQY-DLAYKINAIGPKNLAAAAYSVG--AEIVQISTDYVFDGE--AKEPITEFDEV--------  120 (281)
T ss_dssp             SEEEECCCCCCHHHHHHCH-HHHHHHHTHHHHHHHHHHHHHT--CEEEEEEEGGGSCSC--CSSCBCTTSCC--------
T ss_pred             CEEEeeccccccccccccc-hhhccccccccccccccccccc--ccccccccceeeecc--ccccccccccc--------
Confidence            999999997664  22233 4778889999999999888876  688888888765443  44566776653        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHH-HHHhcCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSL-ALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       .+...|+.+|..+|.+++    +.+.+++++||+++|||+..     +...+. ....+.......+..++|+|++|++
T Consensus       121 -~~~~~~~~~k~~~e~~~~----~~~~~~~i~R~~~vyG~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~  190 (281)
T d1vl0a_         121 -NPQSAYGKTKLEGENFVK----ALNPKYYIVRTAWLYGDGNN-----FVKTMINLGKTHDELKVVHDQVGTPTSTVDLA  190 (281)
T ss_dssp             -CCCSHHHHHHHHHHHHHH----HHCSSEEEEEECSEESSSSC-----HHHHHHHHHHHCSEEEEESSCEECCEEHHHHH
T ss_pred             -cchhhhhhhhhHHHHHHH----HhCCCccccceeEEeCCCcc-----cccchhhhhccCCceeecCCceeccchhhhhh
Confidence             456789999999998875    45789999999999999632     233333 3333444444447889999999999


Q ss_pred             HHHHHhhcCCCCCceEE-EeccccCHHHHHHHHHhhCCC
Q 023244          241 RAHIFLLEYPDAKGRYI-CSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~-~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      .++..++++... |.|| .+++.+|+.|+++.+++.+|.
T Consensus       191 ~~~~~~~~~~~~-g~~~~~~~~~~s~~e~~~~i~~~~g~  228 (281)
T d1vl0a_         191 RVVLKVIDEKNY-GTFHCTCKGICSWYDFAVEIFRLTGI  228 (281)
T ss_dssp             HHHHHHHHHTCC-EEEECCCBSCEEHHHHHHHHHHHHCC
T ss_pred             hhhhhhhhhccc-CceeEeCCCccchHHHHHHHHHHhCC
Confidence            999999988754 6777 556789999999999998875

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.7e-31  Score=212.88  Aligned_cols=209  Identities=18%  Similarity=0.106  Sum_probs=157.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|+|||||||||||++|+++|+++|.  +|++++|++.     ... ..       ....+....+|+.+.+.+...++
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~-----~~~-~~-------~~~~i~~~~~D~~~~~~~~~~~~   79 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKL-----TFD-EE-------AYKNVNQEVVDFEKLDDYASAFQ   79 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCC-----CCC-SG-------GGGGCEEEECCGGGGGGGGGGGS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChh-----hhc-cc-------ccceeeeeeeccccccccccccc
Confidence            467899999999999999999999984  8999999872     100 01       11367778899999999999999


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      ++|+|||+++.....  .....+.++|+.++.+++++|++.+ +++|||+||..++.                       
T Consensus        80 ~~d~vi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~a~~~~-v~~fi~~Ss~~~~~-----------------------  133 (232)
T d2bkaa1          80 GHDVGFCCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK-----------------------  133 (232)
T ss_dssp             SCSEEEECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT-----------------------
T ss_pred             ccccccccccccccc--cchhhhhhhcccccceeeecccccC-ccccccCCcccccc-----------------------
Confidence            999999999865431  2235788999999999999999999 99999999987531                       


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCc-EEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLD-LVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~-~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       .+.+.|+.+|..+|..+.+    .+++ ++|+|||.+||+.....   ....+.........  ........|+++|+|
T Consensus       134 -~~~~~Y~~~K~~~E~~l~~----~~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~I~~~dvA  203 (232)
T d2bkaa1         134 -SSNFLYLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLP--DSWASGHSVPVVTVV  203 (232)
T ss_dssp             -TCSSHHHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCC--TTGGGGTEEEHHHHH
T ss_pred             -CccchhHHHHHHhhhcccc----ccccceEEecCceeecCCCcCc---HHHHHHHHHhhccC--CcccCCCeEEHHHHH
Confidence             1235699999999988754    4664 89999999999865432   22222222222110  112234679999999


Q ss_pred             HHHHHhhcCCCCCceEEEecc
Q 023244          241 RAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~~  261 (285)
                      ++++.++.++..++.++++++
T Consensus       204 ~a~i~~~~~~~~~~~~i~~~~  224 (232)
T d2bkaa1         204 RAMLNNVVRPRDKQMELLENK  224 (232)
T ss_dssp             HHHHHHHTSCCCSSEEEEEHH
T ss_pred             HHHHHHHhcCccCCeEEEcHH
Confidence            999999988877777777653

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-30  Score=203.24  Aligned_cols=199  Identities=17%  Similarity=0.198  Sum_probs=150.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||||+||||||+||++++++|+++||+|++++|++        ++....     ...+++++.+|++|.+++.++++++|
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~--------~~~~~~-----~~~~~~~~~gD~~d~~~l~~al~~~d   69 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS--------SRLPSE-----GPRPAHVVVGDVLQAADVDKTVAGQD   69 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG--------GGSCSS-----SCCCSEEEESCTTSHHHHHHHHTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcCh--------hhcccc-----cccccccccccccchhhHHHHhcCCC
Confidence            68999999999999999999999999999999987        222211     12478999999999999999999999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCC
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSW  164 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~  164 (285)
                      +|||++|.....  ++    .+.+..+++++++++++.+ ++|||++||..+++....        .          .+.
T Consensus        70 ~vi~~~g~~~~~--~~----~~~~~~~~~~l~~aa~~~~-v~r~i~~ss~~~~~~~~~--------~----------~~~  124 (205)
T d1hdoa_          70 AVIVLLGTRNDL--SP----TTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDPTK--------V----------PPR  124 (205)
T ss_dssp             EEEECCCCTTCC--SC----CCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCTTC--------S----------CGG
T ss_pred             EEEEEeccCCch--hh----hhhhHHHHHHHHHHHHhcC-CCeEEEEeeeeccCCCcc--------c----------ccc
Confidence            999999875432  11    2345778999999999999 999999999876533211        0          012


Q ss_pred             CchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHH
Q 023244          165 GKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHI  244 (285)
Q Consensus       165 ~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~  244 (285)
                      ...|...|..+|++++    +.+++++++||+.+++........              ..........+|+.+|+|++++
T Consensus       125 ~~~~~~~~~~~e~~l~----~~~~~~tiirp~~~~~~~~~~~~~--------------~~~~~~~~~~~i~~~DvA~~~~  186 (205)
T d1hdoa_         125 LQAVTDDHIRMHKVLR----ESGLKYVAVMPPHIGDQPLTGAYT--------------VTLDGRGPSRVISKHDLGHFML  186 (205)
T ss_dssp             GHHHHHHHHHHHHHHH----HTCSEEEEECCSEEECCCCCSCCE--------------EESSSCSSCSEEEHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHH----hcCCceEEEecceecCCCCcccEE--------------EeeCCCCCCCcCCHHHHHHHHH
Confidence            2458889999998774    468999999999998753222110              1111234557999999999999


Q ss_pred             HhhcCCCCCce-EEEe
Q 023244          245 FLLEYPDAKGR-YICS  259 (285)
Q Consensus       245 ~~~~~~~~~~~-~~~~  259 (285)
                      .++++++..|. +..+
T Consensus       187 ~~l~~~~~~g~~~~~s  202 (205)
T d1hdoa_         187 RCLTTDEYDGHSTYPS  202 (205)
T ss_dssp             HTTSCSTTTTCEEEEE
T ss_pred             HHhCCCCCCCEEEecC
Confidence            99998875554 4443

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.96  E-value=5e-29  Score=207.35  Aligned_cols=241  Identities=20%  Similarity=0.227  Sum_probs=161.8

Q ss_pred             EEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhH-HHHh-----
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGF-DAAI-----   80 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~-~~~~-----   80 (285)
                      |||||||||||++|+++|+++|+ +|+++++-.      ...+...+.+..         ..|..+.+.+ ....     
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~------~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~   66 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLK------DGTKFVNLVDLN---------IADYMDKEDFLIQIMAGEEF   66 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCS------SGGGGHHHHTSC---------CSEEEEHHHHHHHHHTTCCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCC------Ccchhhcccccc---------hhhhccchHHHHHHhhhhcc
Confidence            89999999999999999999995 788886433      112222222221         1222333322 2222     


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhh
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRK  160 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~  160 (285)
                      ..+++|+|+|+......... ..+...|+.++.+++++++..+ + ++|+.||..++++...  ...+++.+        
T Consensus        67 ~~~~~i~~~aa~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~-i-~~v~~ss~~~~~~~~~--~~~~~~~~--------  133 (307)
T d1eq2a_          67 GDVEAIFHEGACSSTTEWDG-KYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYGGRTS--DFIESREY--------  133 (307)
T ss_dssp             SSCCEEEECCSCCCTTCCCH-HHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGTTCCS--CBCSSGGG--------
T ss_pred             cchhhhhhhccccccccccc-cccccccccccccccccccccc-c-cccccccccccccccc--cccccccc--------
Confidence            24789999998766654444 4788899999999999999988 5 5677777766644422  22233222        


Q ss_pred             cCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCC--CCccHHHHHHHHhcCc-ccc-c--cccCccee
Q 023244          161 LDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGNR-EEY-G--FLLNTSMV  234 (285)
Q Consensus       161 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~~~~~-~~~-~--~~~~~~~i  234 (285)
                       ..+.+.|+.+|.++|.++..+++.++++++++||+++|||.....  .......+...+.... ... .  ....++|+
T Consensus       134 -~~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~  212 (307)
T d1eq2a_         134 -EKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFV  212 (307)
T ss_dssp             -CCCSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEE
T ss_pred             -cccccccccccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeee
Confidence             246678999999999999999988899999999999999976433  2233344444443333 222 1  25578999


Q ss_pred             eHHHHHHHHHHhhcCCCCCceEEE-eccccCHHHHHHHHHhhCCC
Q 023244          235 HVDDVARAHIFLLEYPDAKGRYIC-SSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       235 ~~~D~a~~~~~~~~~~~~~~~~~~-~~~~~s~~e~~~~i~~~~~~  278 (285)
                      |++|++.++..++.+.. .+.||+ +++..|+.|+++.+.+..++
T Consensus       213 ~v~d~~~~~~~~~~~~~-~~~~~~~~~~~~si~~i~~~i~~~~~~  256 (307)
T d1eq2a_         213 YVGDVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKK  256 (307)
T ss_dssp             EHHHHHHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC------
T ss_pred             ecccHHHHHHHHhhhcc-ccccccccccchhHHHHHHHHHHhcCC
Confidence            99999999999998764 457765 56799999999999886654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.95  E-value=2.6e-29  Score=209.58  Aligned_cols=235  Identities=16%  Similarity=0.128  Sum_probs=160.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      +++||||||||||||++|+++|+++||+|++++|+.....   ......+...  ...+++++.+|++|.+.+.+.++++
T Consensus         2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~---~~~~~~~~~~--~~~~v~~v~~d~~d~~~~~~~~~~~   76 (312)
T d1qyda_           2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSN---IDKVQMLLYF--KQLGAKLIEASLDDHQRLVDALKQV   76 (312)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSC---HHHHHHHHHH--HTTTCEEECCCSSCHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccc---hhHHHHHhhh--ccCCcEEEEeecccchhhhhhccCc
Confidence            4678999999999999999999999999999999762111   1111111111  1237899999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      ++++|+++.....          .|..++.++++++++.+ ..++++.||.++....        +..+         ..
T Consensus        77 ~~~~~~~~~~~~~----------~~~~~~~~~l~~a~~~~-~~~~v~~Ss~g~~~~~--------~~~~---------~~  128 (312)
T d1qyda_          77 DVVISALAGGVLS----------HHILEQLKLVEAIKEAG-NIKRFLPSEFGMDPDI--------MEHA---------LQ  128 (312)
T ss_dssp             SEEEECCCCSSSS----------TTTTTHHHHHHHHHHSC-CCSEEECSCCSSCTTS--------CCCC---------CS
T ss_pred             chhhhhhhhcccc----------cchhhhhHHHHHHHHhc-CCcEEEEeeccccCCC--------cccc---------cc
Confidence            9999998764432          12344567888888887 6788888876532111        1111         12


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cccCcceeeHHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLLNTSMVHVDDVAR  241 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~  241 (285)
                      +...|..+|..++.    +....+++++++||+.+||+............   ........+.  .+..++|+|++|+|+
T Consensus       129 ~~~~~~~~~~~~~~----~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~~~~i~v~Dva~  201 (312)
T d1qyda_         129 PGSITFIDKRKVRR----AIEAASIPYTYVSSNMFAGYFAGSLAQLDGHM---MPPRDKVLIYGDGNVKGIWVDEDDVGT  201 (312)
T ss_dssp             STTHHHHHHHHHHH----HHHHTTCCBCEEECCEEHHHHTTTSSCTTCCS---SCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred             hhhhhhHHHHHHHH----hhcccccceEEeccceeecCCccchhhHHHHh---hhcccccccccccccccceeeHHHHHH
Confidence            33456666555554    44567899999999999997533221111000   0012222222  266789999999999


Q ss_pred             HHHHhhcCCCCCc-e-EEEec-cccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDAKG-R-YICSS-HTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~~~-~-~~~~~-~~~s~~e~~~~i~~~~~~  278 (285)
                      +++.++.++...+ . |++++ +.+|++|+++.+++.+|+
T Consensus       202 a~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~  241 (312)
T d1qyda_         202 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ  241 (312)
T ss_dssp             HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred             HHHHHhcCccccCceEEEeCCCcCCCHHHHHHHHHHHHCC
Confidence            9999998876543 4 55554 679999999999998775

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.95  E-value=7.1e-28  Score=193.91  Aligned_cols=227  Identities=17%  Similarity=0.175  Sum_probs=159.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCe--EEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYS--VTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |++|||||||||||+++++.|+++|++  |+.+.|++        +....+      ..+++++.+|+++.+.+.+++++
T Consensus         3 ~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~--------~~~~~~------~~~~~~~~~d~~~~~~~~~~~~~   68 (252)
T d2q46a1           3 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSA--------QGKEKI------GGEADVFIGDITDADSINPAFQG   68 (252)
T ss_dssp             CCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCH--------HHHHHT------TCCTTEEECCTTSHHHHHHHHTT
T ss_pred             CCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCH--------HHHHhc------cCCcEEEEeeecccccccccccc
Confidence            679999999999999999999999976  55566665        222221      13678899999999999999999


Q ss_pred             CCEEEEecccCCC---------------CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCccc
Q 023244           83 CTGVLHVATPVDF---------------EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        83 ~d~vih~a~~~~~---------------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      +|+|||+|+....               ..... .....+|+.+++++++.+.... .+++.+.|+...+....    +.
T Consensus        69 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~----~~  142 (252)
T d2q46a1          69 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDG-QYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTNPDH----PL  142 (252)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSCCCCCEECCTT-CSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTCTTC----GG
T ss_pred             ceeeEEEEeeccccccccchhhhhhcccccccc-hhhhccccccceeecccccccc-ccccccccccccCCCCc----cc
Confidence            9999999986432               01222 3667889999999999998888 88899888765432110    00


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGF  227 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
                      .             ..+...|...+.+.+    .+..+.+++++++||+++|||...... ..        .+.... ..
T Consensus       143 ~-------------~~~~~~~~~~~~~~~----~~~~~~~~~~~ilRp~~v~g~~~~~~~-~~--------~~~~~~-~~  195 (252)
T d2q46a1         143 N-------------KLGNGNILVWKRKAE----QYLADSGTPYTIIRAGGLLDKEGGVRE-LL--------VGKDDE-LL  195 (252)
T ss_dssp             G-------------GGGGCCHHHHHHHHH----HHHHHSSSCEEEEEECEEECSCTTSSC-EE--------EESTTG-GG
T ss_pred             c-------------cccccchhhhhhhhh----hhhhcccccceeecceEEECCCcchhh-hh--------hccCcc-cc
Confidence            0             011223444444433    444567999999999999998643321 00        111111 11


Q ss_pred             ccCcceeeHHHHHHHHHHhhcCCCCCc-eEEEecc----ccCHHHHHHHHHhhCCC
Q 023244          228 LLNTSMVHVDDVARAHIFLLEYPDAKG-RYICSSH----TLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       228 ~~~~~~i~~~D~a~~~~~~~~~~~~~~-~~~~~~~----~~s~~e~~~~i~~~~~~  278 (285)
                      ....+|||++|+|++++.+++++...| +||++++    ..++.++.+++++..++
T Consensus       196 ~~~~~~i~~~Dva~a~~~~l~~~~~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r  251 (252)
T d2q46a1         196 QTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR  251 (252)
T ss_dssp             GSSCCEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHTTCCCC
T ss_pred             cCCCCeEEHHHHHHHHHHHhCCccccCcEEEEeeCCCCCChhHHHHHHHHHHHHhc
Confidence            445689999999999999999887665 6876542    45688888888777665

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.95  E-value=6.8e-28  Score=199.68  Aligned_cols=224  Identities=17%  Similarity=0.079  Sum_probs=164.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--C
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--C   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~   83 (285)
                      |||||||||||||++|+++|.++|+ +++++++..                        .+.+|++|.+.+++++++  +
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~-~v~~~~~~~------------------------~~~~Dl~~~~~~~~~i~~~~~   55 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGN-LIALDVHSK------------------------EFCGDFSNPKGVAETVRKLRP   55 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSE-EEEECTTCS------------------------SSCCCTTCHHHHHHHHHHHCC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCC-EEEEECCCc------------------------cccCcCCCHHHHHHHHHHcCC
Confidence            5799999999999999999998886 455555440                        024899999999999874  7


Q ss_pred             CEEEEecccCCC--CCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           84 TGVLHVATPVDF--EDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        84 d~vih~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      |+|||+||....  ...++ ...++.|+.++.+|++++++.+  .+++++||..+++..  ...+.+|+++.        
T Consensus        56 D~Vih~Aa~~~~~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~--~~~~~~ss~~~~~~~--~~~~~~E~~~~--------  122 (298)
T d1n2sa_          56 DVIVNAAAHTAVDKAESEP-ELAQLLNATSVEAIAKAANETG--AWVVHYSTDYVFPGT--GDIPWQETDAT--------  122 (298)
T ss_dssp             SEEEECCCCCCHHHHTTCH-HHHHHHHTHHHHHHHHHHTTTT--CEEEEEEEGGGSCCC--TTCCBCTTSCC--------
T ss_pred             CEEEEecccccccccccCc-cccccccccccccchhhhhccc--cccccccccccccCC--CCCCCcccccc--------
Confidence            999999997664  34455 4889999999999999999887  689999998866543  45577787764        


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHh-cCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL-GNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~D~a  240 (285)
                       .|.+.|+.+|..+|..+...    .....++|++..+++....    ....+..... ...........++++|++|++
T Consensus       123 -~p~~~y~~~k~~~e~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  193 (298)
T d1n2sa_         123 -SPLNVYGKTKLAGEKALQDN----CPKHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSVINDQYGAPTGAELLA  193 (298)
T ss_dssp             -CCSSHHHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHH
T ss_pred             -CCCchHhhhhhhhhhhHHhh----hcccccccccceeeccCCc----cchhhhhhhcccceeecccceeecccccchHH
Confidence             45688999999999887653    3456677777666542111    2222222222 222333336677899999999


Q ss_pred             HHHHHhhc----CCCCCceEEEec-cccCHHHHHHHHHhhC
Q 023244          241 RAHIFLLE----YPDAKGRYICSS-HTLTIQEMAEFLSAKY  276 (285)
Q Consensus       241 ~~~~~~~~----~~~~~~~~~~~~-~~~s~~e~~~~i~~~~  276 (285)
                      +++..++.    .+...++||+++ +.+++.++++.+.+..
T Consensus       194 ~~~~~~i~~~~~~~~~~~~~n~~~~~~~~~~~~~~~i~~~~  234 (298)
T d1n2sa_         194 DCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEA  234 (298)
T ss_dssp             HHHHHHHHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhccccccccccccCCCceecHHHHHHHHhhh
Confidence            99888775    344567898665 6899999999887743

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.95  E-value=1e-27  Score=189.37  Aligned_cols=194  Identities=20%  Similarity=0.153  Sum_probs=135.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh-c
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-A   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~   81 (285)
                      .|+|||||||||||++|+++|+++|+  +|+++.|++.                 ...+++.   .+..|..++...+ .
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~-----------------~~~~~~~---~~~~d~~~~~~~~~~   61 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKAL-----------------AEHPRLD---NPVGPLAELLPQLDG   61 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCC-----------------CCCTTEE---CCBSCHHHHGGGCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCch-----------------hhccccc---ccccchhhhhhcccc
Confidence            48999999999999999999999997  5666677651                 0112333   3333433333333 3


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhc
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKL  161 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~  161 (285)
                      .+|+|||++|......... ..+.+.|+.++.+++++|++.+ +++++++||..++..                      
T Consensus        62 ~~d~vi~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~-v~~~i~~Ss~~~~~~----------------------  117 (212)
T d2a35a1          62 SIDTAFCCLGTTIKEAGSE-EAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADAK----------------------  117 (212)
T ss_dssp             CCSEEEECCCCCHHHHSSH-HHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCTT----------------------
T ss_pred             chheeeeeeeeeccccccc-cccccchhhhhhhccccccccc-ccccccccccccccc----------------------
Confidence            4899999998654422233 4889999999999999999988 999999999876422                      


Q ss_pred             CCCCchhHhhHHHHHHHHHHHHHHcCC-cEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHH
Q 023244          162 DSWGKSYAISKTLTERAALEFAEEHGL-DLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVA  240 (285)
Q Consensus       162 ~~~~~~Y~~sK~~~E~~~~~~~~~~~i-~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a  240 (285)
                        +.+.|+.+|..+|..++    +.++ +++|+||+.||||.........+        .........+.+.+||++|+|
T Consensus       118 --~~~~y~~~K~~~E~~l~----~~~~~~~~I~Rp~~v~G~~~~~~~~~~~--------~~~~~~~~~~~~~~i~v~DvA  183 (212)
T d2a35a1         118 --SSIFYNRVKGELEQALQ----EQGWPQLTIARPSLLFGPREEFRLAEIL--------AAPIARILPGKYHGIEACDLA  183 (212)
T ss_dssp             --CSSHHHHHHHHHHHHHT----TSCCSEEEEEECCSEESTTSCEEGGGGT--------TCCCC----CHHHHHHHHHHH
T ss_pred             --cccchhHHHHHHhhhcc----ccccccceeeCCcceeCCcccccHHHHH--------HHHHhhccCCCCcEEEHHHHH
Confidence              23569999999998875    3466 59999999999987543211111        010000002234679999999


Q ss_pred             HHHHHhhcCCCCCceEE
Q 023244          241 RAHIFLLEYPDAKGRYI  257 (285)
Q Consensus       241 ~~~~~~~~~~~~~~~~~  257 (285)
                      ++++.+++++.. |.++
T Consensus       184 ~ai~~~~~~~~~-g~~~  199 (212)
T d2a35a1         184 RALWRLALEEGK-GVRF  199 (212)
T ss_dssp             HHHHHHHTCCCS-EEEE
T ss_pred             HHHHHHHcCCCC-CCEE
Confidence            999999987654 4433

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.94  E-value=1.1e-27  Score=198.79  Aligned_cols=230  Identities=17%  Similarity=0.225  Sum_probs=158.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|||||||||||||++++++|++.|++|++++|++....  .......+...  ....++++.+|+.+...+.+.++++
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~--~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~   77 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASS--NSEKAQLLESF--KASGANIVHGSIDDHASLVEAVKNV   77 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTT--THHHHHHHHHH--HTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCcccc--chhHHHHHHhh--ccCCcEEEEeecccchhhhhhhhhc
Confidence            3689999999999999999999999999999999762110  11111112211  1236889999999999999999999


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCC
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDS  163 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~  163 (285)
                      +.|+|+++....              .++.+++++++..+ .+++++.||.... ..        +...         ..
T Consensus        78 ~~vi~~~~~~~~--------------~~~~~~~~a~~~~~-~~~~~~~s~~~~~-~~--------~~~~---------~~  124 (307)
T d1qyca_          78 DVVISTVGSLQI--------------ESQVNIIKAIKEVG-TVKRFFPSEFGND-VD--------NVHA---------VE  124 (307)
T ss_dssp             SEEEECCCGGGS--------------GGGHHHHHHHHHHC-CCSEEECSCCSSC-TT--------SCCC---------CT
T ss_pred             eeeeeccccccc--------------chhhHHHHHHHHhc-cccceeeeccccc-cc--------cccc---------cc
Confidence            999999875433              23346778888888 7888888885422 11        1110         11


Q ss_pred             CCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc--cccCcceeeHHHHHH
Q 023244          164 WGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG--FLLNTSMVHVDDVAR  241 (285)
Q Consensus       164 ~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~D~a~  241 (285)
                      +...+...+...+..+    .+.+++++++||+++||+.........    .....+....+.  .+..++|+|++|+|+
T Consensus       125 ~~~~~~~~~~~~~~~~----~~~~~~~~i~r~~~v~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  196 (307)
T d1qyca_         125 PAKSVFEVKAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDIGT  196 (307)
T ss_dssp             THHHHHHHHHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHHHH
T ss_pred             cccccccccccccchh----hccCCCceecccceecCCCccchhhhh----hhhhhcccceeeecccccccCCcHHHHHH
Confidence            1233555555555444    456899999999999997543211110    011112222222  367889999999999


Q ss_pred             HHHHhhcCCCCCc--eEEEe-ccccCHHHHHHHHHhhCCC
Q 023244          242 AHIFLLEYPDAKG--RYICS-SHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       242 ~~~~~~~~~~~~~--~~~~~-~~~~s~~e~~~~i~~~~~~  278 (285)
                      +++.+++++...+  +|+++ ++.+|+.|+++.+.+.+|.
T Consensus       197 ~~~~~l~~~~~~~~~~~~~~~~~~~s~~ei~~~~~~~~G~  236 (307)
T d1qyca_         197 FTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK  236 (307)
T ss_dssp             HHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred             HHHHHhcChhhcCceeEEeCCCCccCHHHHHHHHHHHHCC
Confidence            9999999876544  35654 5789999999999999986

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=6.2e-25  Score=176.02  Aligned_cols=216  Identities=19%  Similarity=0.158  Sum_probs=155.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|+++||||++.||+.+++.|+++|++|++++|+.        +......+.    -+.+++.+|++|++++++++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~l~~~~~~----~~~~~~~~Dv~~~~~v~~~~   68 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEE--------GPLREAAEA----VGAHPVVMDVADPASVERGF   68 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHT----TTCEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHH----cCCeEEEEecCCHHHHHHHH
Confidence            777789999999999999999999999999999999986        333333322    15778999999999888877


Q ss_pred             c-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCc
Q 023244           81 A-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                      +       .+|++||+||....     ...+.++..+++|+.++..+.+++.+.   +....++++||.. ..+.     
T Consensus        69 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-~~~~-----  142 (242)
T d1ulsa_          69 AEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGN-----  142 (242)
T ss_dssp             HHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCC-----
T ss_pred             HHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-ccCC-----
Confidence            5       47999999997554     122334689999999999888876543   2245677777753 2121     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||.+.+.+.+.++.++   ||+++.|.||.+.++..... +   ......... .
T Consensus       143 -----------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~-~---~~~~~~~~~-~  200 (242)
T d1ulsa_         143 -----------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV-P---EKVREKAIA-A  200 (242)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS-C---HHHHHHHHH-T
T ss_pred             -----------------CCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC-C---HHHHHHHHh-c
Confidence                             234679999999999999888774   79999999999988754332 1   111111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .++.     .+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       201 ~pl~-----R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  237 (242)
T d1ulsa_         201 TPLG-----RAGKPLEVAYAALFLLSDESSFITGQVLFVDGG  237 (242)
T ss_dssp             CTTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCC-----CCCCHHHHHHHHHHHhchhhCCCCCcEEEECCC
Confidence            2222     68899999999999996433  3455 445443

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=3.7e-25  Score=176.69  Aligned_cols=209  Identities=18%  Similarity=0.100  Sum_probs=151.4

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +.++|++|||||++.||+++++.|+++|++|++++|+..                  ...++..+++|++|+++++++++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~------------------~~~~~~~~~~Dv~~~~~v~~~~~   65 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG------------------APKGLFGVEVDVTDSDAVDRAFT   65 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC------------------CCTTSEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc------------------hhcCceEEEEecCCHHHHHHHHH
Confidence            346899999999999999999999999999999999871                  11256778999999998888775


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||....     ...+.++..+++|+.++..+.+++    ++.+ -+++|++||..+..+.     
T Consensus        66 ~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~-----  139 (237)
T d1uzma1          66 AVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI-----  139 (237)
T ss_dssp             HHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC---------
T ss_pred             HHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCC-----
Confidence                   47999999997543     122334688999999988776654    4445 6799999998865433     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||.+.+.+.+.++.++   ||++++|.||.+.++.....    ........ ...
T Consensus       140 -----------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~----~~~~~~~~-~~~  197 (237)
T d1uzma1         140 -----------------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL----DERIQQGA-LQF  197 (237)
T ss_dssp             ------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS----CHHHHHHH-GGG
T ss_pred             -----------------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc----CHHHHHHH-Hhc
Confidence                             234679999999999999888774   89999999999987632111    11111111 122


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .++.     .+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       198 ~pl~-----R~~~pedvA~~v~fL~S~~s~~itG~~i~vdGG  234 (237)
T d1uzma1         198 IPAK-----RVGTPAEVAGVVSFLASEDASYISGAVIPVDGG  234 (237)
T ss_dssp             CTTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCC-----CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            2222     68999999999999996443  3454 445543

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=1.2e-25  Score=181.61  Aligned_cols=222  Identities=14%  Similarity=0.083  Sum_probs=159.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|+++||||++.||++++++|+++|++|++.+|+.        +.... .+++...+.++.++.+|++|+++++++
T Consensus         7 m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~   78 (255)
T d1fmca_           7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINA--------DAANHVVDEIQQLGGQAFACRCDITSEQELSAL   78 (255)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHH
Confidence            334679999999999999999999999999999999976        22222 222222345789999999999988887


Q ss_pred             hc-------CCCEEEEecccCCCC----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      ++       .+|++||+||.....    ..+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+.    
T Consensus        79 ~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~----  153 (255)
T d1fmca_          79 ADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKN----  153 (255)
T ss_dssp             HHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCC----
T ss_pred             HHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccc----
Confidence            65       479999999975541    122335889999999888877654    344 4689999998764333    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        +....|+.||...+.+.+.++.++   ||++++|.||.|.++........   ........ 
T Consensus       154 ------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~---e~~~~~~~-  211 (255)
T d1fmca_         154 ------------------INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITP---EIEQKMLQ-  211 (255)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCH---HHHHHHHH-
T ss_pred             ------------------cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCH---HHHHHHHh-
Confidence                              344679999999999998888774   89999999999987643222111   11111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEeccc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSHT  262 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~~  262 (285)
                      ..++.     .+..++|+|+++.+++....  ..|. +.+.|+.
T Consensus       212 ~~pl~-----R~g~pedvA~~v~fL~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         212 HTPIR-----RLGQPQDIANAALFLCSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             TCSSC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred             cCCCC-----CCcCHHHHHHHHHHHhCchhcCCcCCEEEECcCc
Confidence            12232     68899999999999996443  3454 5566654

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=99.93  E-value=1.3e-24  Score=177.02  Aligned_cols=222  Identities=14%  Similarity=0.190  Sum_probs=158.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||++.||+.+++.|+++|++|++++|+.        +..+.. +++. ....+.++.+|++|+++++++++ 
T Consensus         5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~l~-~~~~~~~~~~Dv~~~~~v~~~~~~   75 (268)
T d2bgka1           5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIAD--------DHGQKVCNNIG-SPDVISFVHCDVTKDEDVRNLVDT   75 (268)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHC-CTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhc-CCCceEEEEccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999976        333222 2222 23468889999999998888875 


Q ss_pred             ------CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           82 ------GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                            .+|++||+||.....       ..+.++..+++|+.++..+.+++.    +.+ -.++|++||........   
T Consensus        76 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~---  151 (268)
T d2bgka1          76 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE---  151 (268)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT---
T ss_pred             HHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCcccccccccccccc---
Confidence                  479999999974431       112345888999999888877754    344 57999999987653331   


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                        .....|+.||.+.+.+.+.++.++   ||++++|.||.+.+|....................
T Consensus       152 ------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  213 (268)
T d2bgka1         152 ------------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQA  213 (268)
T ss_dssp             ------------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHT
T ss_pred             ------------------ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhc
Confidence                              123469999999999999888774   89999999999998865443222222222211111


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ..+..     .+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       214 ~~~~g-----r~~~pedvA~~v~fL~S~~s~~itGq~i~VDGG  251 (268)
T d2bgka1         214 ANLKG-----TLLRAEDVADAVAYLAGDESKYVSGLNLVIDGG  251 (268)
T ss_dssp             CSSCS-----CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cccCC-----CCcCHHHHHHHHHHHhChhhCCccCceEEECcC
Confidence            11222     57899999999999996433  3454 456554

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.93  E-value=2.3e-25  Score=179.63  Aligned_cols=217  Identities=16%  Similarity=0.137  Sum_probs=156.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||++.||++++++|+++|++|++++|+.        +.... ..++...+.++..+.+|++|+++++++++ 
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~--------~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~   80 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQ--------KSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK   80 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSH--------HHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            468999999999999999999999999999999976        32222 22222334578999999999998888875 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+|+.....     ..+.++..+++|+.++..+.+++    ++++ -.++|++||..+..+.      
T Consensus        81 ~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~------  153 (251)
T d2c07a1          81 ILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGN------  153 (251)
T ss_dssp             HHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC------
T ss_pred             HHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCC------
Confidence                  479999999975541     12334688999999988877765    3444 5799999998765333      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.||.+.+.+.+.++.++   ||++++|.||.+.++.....    ........... .
T Consensus       154 ----------------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~----~~~~~~~~~~~-~  212 (251)
T d2c07a1         154 ----------------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI----SEQIKKNIISN-I  212 (251)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C----CHHHHHHHHTT-C
T ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc----CHHHHHHHHhc-C
Confidence                            334679999999999999998774   79999999999988753322    11222222222 2


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ++.     .+..++|+|.++.+++....  ..|. +.+.|+
T Consensus       213 pl~-----R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  248 (251)
T d2c07a1         213 PAG-----RMGTPEEVANLACFLSSDKSGYINGRVFVIDGG  248 (251)
T ss_dssp             TTS-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            333     68899999999999996543  2454 445544

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=99.93  E-value=1.9e-24  Score=173.79  Aligned_cols=218  Identities=15%  Similarity=0.146  Sum_probs=151.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||++.||+.+++.|+++|++|++.+|++.      ......+++.   +.++.++.+|++|+++++++++  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~------~~~~~~~~~~---g~~~~~~~~Dvs~~~~v~~~~~~~   74 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA------PEAEAAIRNL---GRRVLTVKCDVSQPGDVEAFGKQV   74 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC------HHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch------HHHHHHHHHc---CCcEEEEEeeCCCHHHHHHHHHHH
Confidence            4789999999999999999999999999999999761      1122223333   3578999999999998888765  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||.....     ..+.++..+++|+.++..+.+++.    +++ -.++|++||.....+.       
T Consensus        75 ~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~-------  146 (247)
T d2ew8a1          75 ISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKI-------  146 (247)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCC-------
T ss_pred             HHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccC-------
Confidence                 479999999985541     223346899999999888877653    444 5799999998764332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.||...+.+.+.++.++   ||++++|.||.+.+|.........   ..........+
T Consensus       147 ---------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~---~~~~~~~~~~~  208 (247)
T d2ew8a1         147 ---------------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSA---MFDVLPNMLQA  208 (247)
T ss_dssp             ---------------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC---------------------CTTSS
T ss_pred             ---------------cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccch---hHHHHHHHhcc
Confidence                           334679999999999998888774   799999999999887533211110   01111111112


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      +     ..+..++|+|+++++++....  ..|. +.++|+
T Consensus       209 l-----~r~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  243 (247)
T d2ew8a1         209 I-----PRLQVPLDLTGAAAFLASDDASFITGQTLAVDGG  243 (247)
T ss_dssp             S-----CSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESSS
T ss_pred             C-----CCCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            2     267889999999999996443  2454 456554

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=7.8e-25  Score=175.74  Aligned_cols=217  Identities=18%  Similarity=0.185  Sum_probs=158.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ..+|++|||||++.||+++++.|+++|++|++++|+.        +....+ ++.    .++..+.+|++|.++++++++
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~--------~~l~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~   72 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ--------ADLDSLVREC----PGIEPVCVDLGDWEATERALG   72 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH
Confidence            3689999999999999999999999999999999987        333332 233    267889999999999999987


Q ss_pred             C---CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 G---CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ~---~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                      .   +|++||+|+....     ...+.++..+++|+.++..+.+++.+    .+...++|++||.......         
T Consensus        73 ~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---------  143 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---------  143 (244)
T ss_dssp             TCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC---------
T ss_pred             HhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc---------
Confidence            4   7999999998554     12233458899999998887776543    2225799999998764332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.||.+.+.+.+.++.++   ||+++.|.||.|.+|......... . ....... ..++.
T Consensus       144 -------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~-~-~~~~~~~-~~pl~  207 (244)
T d1pr9a_         144 -------------TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDP-H-KAKTMLN-RIPLG  207 (244)
T ss_dssp             -------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSH-H-HHHHHHT-TCTTC
T ss_pred             -------------cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccCh-H-HHHHHHh-cCCCC
Confidence                         334679999999999999988774   799999999999887432221111 1 1111111 12232


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                           .+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       208 -----R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  240 (244)
T d1pr9a_         208 -----KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEGG  240 (244)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCcCHHHHHHHHHHHhCchhCCcCCcEEEECcc
Confidence                 68999999999999996543  3454 455554

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=99.93  E-value=3.5e-25  Score=179.32  Aligned_cols=223  Identities=17%  Similarity=0.155  Sum_probs=157.9

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +.++|++|||||++.||+++++.|+++|++|++.+|+.        +... ...++...+.++.++.+|++|++++++++
T Consensus         5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~   76 (259)
T d2ae2a_           5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQ--------KELNDCLTQWRSKGFKVEASVCDLSSRSERQELM   76 (259)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHH
Confidence            34689999999999999999999999999999999976        2222 22222223457888999999998877765


Q ss_pred             c--------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           81 A--------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~--------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +        .+|++||+||.....     ..+.++..+++|+.++..+.+++.    +.+ -.++|++||.......   
T Consensus        77 ~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---  152 (259)
T d2ae2a_          77 NTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAV---  152 (259)
T ss_dssp             HHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCC---
T ss_pred             HHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-cccccccccccccccc---
Confidence            3        279999999975541     122335899999999888877654    334 5799999998764332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc-HHHHHHHHh
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS-VRSSLALIL  219 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~-~~~~~~~~~  219 (285)
                                         +....|+.+|...+.+.+.++.++   ||++++|.||.|.+|......... .........
T Consensus       153 -------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  213 (259)
T d2ae2a_         153 -------------------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLI  213 (259)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHH
T ss_pred             -------------------ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHH
Confidence                               334679999999999999998874   799999999999876422111111 111111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      . ..++.     .+..++|+|+++++++....  ..|. +.+.|+
T Consensus       214 ~-~~pl~-----R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  252 (259)
T d2ae2a_         214 D-RCALR-----RMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG  252 (259)
T ss_dssp             H-TSTTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             h-cCCCC-----CCcCHHHHHHHHHHHhCchhCCCcCcEEEECCC
Confidence            1 12222     68899999999999996443  2454 445554

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=2.2e-24  Score=172.75  Aligned_cols=209  Identities=14%  Similarity=0.164  Sum_probs=155.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||++.||+++++.|+++|++|++.+|+.        ++.+.+ +++   ..++.++.+|++|+++++++++ 
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   73 (244)
T d1nffa_           5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILD--------EEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDT   73 (244)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHH
Confidence            579999999999999999999999999999999987        333332 233   2478899999999998888775 


Q ss_pred             ------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||.....     ..+.++..+++|+.++..+.+++    ++.+ -.++|++||.....+.      
T Consensus        74 ~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~------  146 (244)
T d1nffa_          74 AVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGT------  146 (244)
T ss_dssp             HHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------
T ss_pred             HHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEecccccccccc------
Confidence                  479999999985541     12334588999999988887765    3344 5799999998864332      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.+|+..+.+.+.++.++   ||+++.|.||.+.+|..... +..         ....
T Consensus       147 ----------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~-~~~---------~~~~  200 (244)
T d1nffa_         147 ----------------VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWV-PED---------IFQT  200 (244)
T ss_dssp             ----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTS-CTT---------CSCC
T ss_pred             ----------------ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhh-hHH---------HHhc
Confidence                            234679999999999999888774   79999999999988753221 100         0111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      +     ...+..++|+|+++.+++....  ..|. +.+.++
T Consensus       201 p-----l~R~~~p~diA~~v~fL~s~~s~~itG~~i~vDGG  236 (244)
T d1nffa_         201 A-----LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG  236 (244)
T ss_dssp             S-----SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             c-----ccCCCCHHHHHHHHHHHhChhhCCCcCCEEEECCC
Confidence            2     2368999999999999996432  3454 556554

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=7.5e-25  Score=176.07  Aligned_cols=216  Identities=13%  Similarity=0.072  Sum_probs=154.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||++.||+.+++.|+++|++|++.+|+.        +..+..++.     +..++++|++|.++++++++  
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~--------~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~   70 (248)
T d2d1ya1           4 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRP--------EGKEVAEAI-----GGAFFQVDLEDERERVRFVEEA   70 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST--------THHHHHHHH-----TCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHc-----CCeEEEEeCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999999987        333333333     45678999999998888775  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||....     ...+.++..+++|+.++.++.+++.+    ++ -.++|++||..+..+.       
T Consensus        71 ~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~-------  142 (248)
T d2d1ya1          71 AYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAE-------  142 (248)
T ss_dssp             HHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBC-------
T ss_pred             HHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccc-------
Confidence                 47999999997554     12223358899999999888877643    34 5799999998865433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC--ccHHHHHHHHhcCc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA--GSVRSSLALILGNR  222 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~--~~~~~~~~~~~~~~  222 (285)
                                     +....|+.+|+..+.+.+.++.++   ||++++|.||.+-+|.......  ........... ..
T Consensus       143 ---------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~  206 (248)
T d2d1ya1         143 ---------------QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWE-DL  206 (248)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHH-TT
T ss_pred             ---------------cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHH-hc
Confidence                           334679999999999998888774   8999999999997763110000  00000001111 11


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .+     ...+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       207 ~p-----l~R~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  243 (248)
T d2d1ya1         207 HA-----LRRLGKPEEVAEAVLFLASEKASFITGAILPVDGG  243 (248)
T ss_dssp             ST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCcCHHHHHHHHHHHhCchhcCCCCcEEEcCcC
Confidence            12     2368899999999999996433  3454 456554

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=99.93  E-value=2.3e-25  Score=178.70  Aligned_cols=215  Identities=16%  Similarity=0.152  Sum_probs=157.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||++.||+++++.|+++|++|++.+|+.        +..+.+.+.  .+.+...+.+|++|+++++++++  
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~--------~~l~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~   72 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE--------NGAQAISDY--LGANGKGLMLNVTDPASIESVLEKI   72 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHH--HGGGEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHH--hCCCCcEEEEEecCHHHhhhhhhhh
Confidence            579999999999999999999999999999999986        333332221  12367889999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+|+.....     ..+.++..+++|+.++..+.+++    ++++ -.++|++||.....+.       
T Consensus        73 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~-------  144 (243)
T d1q7ba_          73 RAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGN-------  144 (243)
T ss_dssp             HHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC-------
T ss_pred             hcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCC-------
Confidence                 479999999875541     22334688999999988887776    3444 5799999998765433       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.||.+.+.+.+.++.++   ||+++.|.||.+-++......    ......... ..+
T Consensus       145 ---------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~----~~~~~~~~~-~~p  204 (243)
T d1q7ba_         145 ---------------GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALS----DDQRAGILA-QVP  204 (243)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC----HHHHHHHHT-TCT
T ss_pred             ---------------CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhh----hhHHHHHHh-cCC
Confidence                           234679999999999999988774   899999999999776422211    111112211 223


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      +.     .+..++|+|+++.+++....  ..|. +.++|+
T Consensus       205 l~-----R~~~pedvA~~v~fL~S~~s~~itGq~i~vdGG  239 (243)
T d1q7ba_         205 AG-----RLGGAQEIANAVAFLASDEAAYITGETLHVNGG  239 (243)
T ss_dssp             TS-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            32     68899999999999996443  2454 456554

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.92  E-value=7.8e-25  Score=175.45  Aligned_cols=219  Identities=19%  Similarity=0.160  Sum_probs=158.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|++|||||++.||+.++++|+++|++|++++|+.        ++...+ ++.    .++..+.+|++|.++++++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~   68 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN--------SDLVSLAKEC----PGIEPVCVDLGDWDATEKA   68 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHS----TTCEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHhc----CCCeEEEEeCCCHHHHHHH
Confidence            777889999999999999999999999999999999986        333332 233    3678899999999999999


Q ss_pred             hcC---CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           80 IAG---CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        80 ~~~---~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      +++   +|++||+||....     ...+.++..+++|+.++..+.+++.+    .+...++|++||.......       
T Consensus        69 ~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~-------  141 (242)
T d1cyda_          69 LGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF-------  141 (242)
T ss_dssp             HTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC-------
T ss_pred             HHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC-------
Confidence            874   7999999997554     12233458899999999888876532    2325699999998754332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREE  224 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~  224 (285)
                                     +....|+.+|.+.+.+.+.++.++   ||++++|.||.+.+|........  ......... ..+
T Consensus       142 ---------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~--~~~~~~~~~-~~p  203 (242)
T d1cyda_         142 ---------------PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSAD--PEFARKLKE-RHP  203 (242)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCC--HHHHHHHHH-HST
T ss_pred             ---------------CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCC--HHHHHHHHh-cCC
Confidence                           234679999999999999988774   79999999999987632111100  011111111 122


Q ss_pred             cccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          225 YGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       225 ~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      +     ..+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       204 l-----~R~~~peeva~~v~fL~S~~s~~itG~~i~vDGG  238 (242)
T d1cyda_         204 L-----RKFAEVEDVVNSILFLLSDRSASTSGGGILVDAG  238 (242)
T ss_dssp             T-----SSCBCHHHHHHHHHHHHSGGGTTCCSSEEEESTT
T ss_pred             C-----CCCcCHHHHHHHHHHHhCchhcCcCCceEEeCcc
Confidence            2     268999999999999996533  2454 456554

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=99.92  E-value=2e-24  Score=174.65  Aligned_cols=219  Identities=14%  Similarity=0.133  Sum_probs=158.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |..++|+++||||++.||+++++.|+++|++|++.+|+.        +.... .+++   +.++..+.+|++|+++++++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~   69 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINL--------EAARATAAEI---GPAACAIALDVTDQASIDRC   69 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCH--------HHHHHHHHHH---CTTEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---CCceEEEEeeCCCHHHHHHH
Confidence            677789999999999999999999999999999999976        33332 2232   34788999999999988888


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|++||+||.....     ..+.++..+++|+.++..+.+++.    +.++..++|++||..+..+.   
T Consensus        70 ~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~---  146 (256)
T d1k2wa_          70 VAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE---  146 (256)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC---
T ss_pred             HHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc---
Confidence            75       479999999976541     223345889999999988887643    22335799999998765333   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH---
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL---  217 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~---  217 (285)
                                         +....|+.||...+.+.+.++.++   ||++++|.||.+-+|....    ........   
T Consensus       147 -------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~----~~~~~~~~~~~  203 (256)
T d1k2wa_         147 -------------------ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDG----VDAKFADYENL  203 (256)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHH----HHHHHHHHHTC
T ss_pred             -------------------ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhh----hhhhhhhhccC
Confidence                               334679999999999998888774   8999999999998874211    11100000   


Q ss_pred             -------HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          218 -------ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       218 -------~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                             ......+     ...+..++|+|+++++++....  ..|. +.+.|+
T Consensus       204 ~~~~~~~~~~~~~P-----lgR~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG  252 (256)
T d1k2wa_         204 PRGEKKRQVGAAVP-----FGRMGRAEDLTGMAIFLATPEADYIVAQTYNVDGG  252 (256)
T ss_dssp             CTTHHHHHHHHHST-----TSSCBCHHHHHHHHHHTTSGGGTTCCSCEEEESTT
T ss_pred             ChHHHHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCchhCCccCceEEECcc
Confidence                   0001112     2368899999999999986433  2454 556554

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=99.92  E-value=1.4e-24  Score=175.05  Aligned_cols=219  Identities=15%  Similarity=0.156  Sum_probs=155.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||++.||+++++.|+++|++|++.+|+.        +......+......++.++.+|++|+++++++++  
T Consensus         5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   76 (251)
T d1zk4a1           5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHS--------DVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT   76 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999999976        3333322211224579999999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+|+.....     ..+.++..+++|+.++..+.+++.    +.+...++|++||..+..+.       
T Consensus        77 ~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~-------  149 (251)
T d1zk4a1          77 EKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD-------  149 (251)
T ss_dssp             HHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC-------
T ss_pred             HHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC-------
Confidence                 479999999885541     122235889999999888888764    33423589999998764332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                     +....|+.||...+.+.+.++.+     +||+++.|.||.+.+|.......   ... .......
T Consensus       150 ---------------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~---~~~-~~~~~~~  210 (251)
T d1zk4a1         150 ---------------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG---AEE-AMSQRTK  210 (251)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT---HHH-HHTSTTT
T ss_pred             ---------------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC---HHH-HHHHHhC
Confidence                           23467999999999988887754     37999999999998764222110   000 0111111


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .++     ..+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       211 ~pl-----~R~~~pedvA~~v~fL~S~~s~~itG~~i~vDGG  247 (251)
T d1zk4a1         211 TPM-----GHIGEPNDIAYICVYLASNESKFATGSEFVVDGG  247 (251)
T ss_dssp             CTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCC-----CCCcCHHHHHHHHHHHhCchhCCCcCcEEEECcc
Confidence            222     268899999999999996443  2454 445544

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=99.92  E-value=1.3e-24  Score=175.90  Aligned_cols=222  Identities=14%  Similarity=0.100  Sum_probs=156.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|+++||||++.||++++++|+++|++|++.+|+.+       +..+. .+++...+.++..+.+|++|+++++++++
T Consensus         5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~-------~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~   77 (261)
T d1geea_           5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKE-------DEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ   77 (261)
T ss_dssp             GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcH-------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence            46799999999999999999999999999999999861       12211 12222224478899999999998888775


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||.....     ..+.++..+++|+.++..+.+++    ++.+.-..+|++||.....+.     
T Consensus        78 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~-----  152 (261)
T d1geea_          78 SAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPW-----  152 (261)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC-----
T ss_pred             HHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccC-----
Confidence                   479999999986541     22333588999999888877665    344434569999998754322     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.||.+.+.+.+.++.++   ||++++|.||.|.+|........  ....... ...
T Consensus       153 -----------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~--~~~~~~~-~~~  212 (261)
T d1geea_         153 -----------------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFAD--PEQRADV-ESM  212 (261)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHS--HHHHHHH-HTT
T ss_pred             -----------------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCC--HHHHHHH-Hhc
Confidence                             234679999999999998888774   89999999999987742111000  0111111 122


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .++.     .+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       213 ~pl~-----R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  249 (261)
T d1geea_         213 IPMG-----YIGEPEEIAAVAAWLASSEASYVTGITLFADGG  249 (261)
T ss_dssp             CTTS-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CCCC-----CCCCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            2332     68899999999999996443  3454 455554

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.92  E-value=1.3e-24  Score=175.80  Aligned_cols=217  Identities=18%  Similarity=0.191  Sum_probs=141.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||++.||+.+++.|+++|++|++++|+.        +... ...++.....++..+.+|++++++++++++ 
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~--------~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   78 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNE--------YELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT   78 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999986        2222 222222234578999999999988777653 


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||....     ...+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+.     
T Consensus        79 ~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~-----  152 (259)
T d1xq1a_          79 VSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSA-----  152 (259)
T ss_dssp             HHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC-------------
T ss_pred             HHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccc-----
Confidence                   37999999997554     1223346889999999888877654    444 5799999998765333     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|.+.+.+.+.++.++   ||++++|.||.+.+|..........   ... ....
T Consensus       153 -----------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~---~~~-~~~~  211 (259)
T d1xq1a_         153 -----------------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---KKV-VISR  211 (259)
T ss_dssp             -------------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------
T ss_pred             -----------------cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHH---HHH-HHhC
Confidence                             234679999999999999888774   8999999999998875332211110   011 1111


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSS  260 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  260 (285)
                      .++.     .+..++|+|.++.+++....  ..|. +.+.|
T Consensus       212 ~pl~-----R~~~pedvA~~v~fL~S~~s~~iTG~~i~vDG  247 (259)
T d1xq1a_         212 KPLG-----RFGEPEEVSSLVAFLCMPAASYITGQTICVDG  247 (259)
T ss_dssp             -----------CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred             CCCC-----CCcCHHHHHHHHHHHhCchhcCCcCcEEEeCC
Confidence            2222     57899999999999996432  2454 34444

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=99.92  E-value=2.6e-24  Score=174.54  Aligned_cols=223  Identities=14%  Similarity=0.139  Sum_probs=152.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||++.||++++++|+++|++|++.+|+..       +..+.+. ++. ..+.++.++.+|++|+++++++++
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~-------~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~   75 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDA-------AEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVD   75 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCH-------HHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHH
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcH-------HHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            4789999999999999999999999999999999751       1111111 110 113478899999999998888875


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+||....     ...+.++..+++|+.++..+.+++    ++++ -.++|++||..+..+.     
T Consensus        76 ~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~-----  149 (260)
T d1x1ta1          76 NAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVAS-----  149 (260)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-----
T ss_pred             HHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceecc-----
Confidence                   47999999997554     122334588999999887776664    4445 5799999998865433     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHH-------H
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSS-------L  215 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~-------~  215 (285)
                                       +....|+.||...+.+.+.++.++   ||+++.|.||.+-+|.............       .
T Consensus       150 -----------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  212 (260)
T d1x1ta1         150 -----------------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAA  212 (260)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------
T ss_pred             -----------------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHH
Confidence                             334679999999999999988774   7999999999998875332211110000       0


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ........+     ...+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       213 ~~~~~~~~P-----l~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG  256 (260)
T d1x1ta1         213 RELLSEKQP-----SLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG  256 (260)
T ss_dssp             --CHHHHCT-----TCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHHHhcCC-----CCCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence            000000111     2368899999999999996433  3454 445544

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.4e-24  Score=171.13  Aligned_cols=217  Identities=16%  Similarity=0.152  Sum_probs=155.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      .+|++|||||++.||+++++.|+++|++|++.+|+.        +..+.+.+.   .+++.++.+|++|.++++++++  
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~---~~~~~~~~~Dvs~~~~v~~~~~~~   73 (250)
T d1ydea1           5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE--------SGGRALEQE---LPGAVFILCDVTQEDDVKTLVSET   73 (250)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHh---cCCCeEEEccCCCHHHHHHHHHHH
Confidence            579999999999999999999999999999999986        444433322   1368899999999998888875  


Q ss_pred             -----CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||....      ...+.++..+++|+.++.++.+++.+.   + -.++|++||..+..+.       
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~isS~~~~~~~-------  145 (250)
T d1ydea1          74 IRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAIGQ-------  145 (250)
T ss_dssp             HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHHCC-------
T ss_pred             HHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccccccccccc-------
Confidence                 47999999996432      112324588999999988887776432   2 2699999998765333       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCC---CCCccHHHHHHHHhcC
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP---KFAGSVRSSLALILGN  221 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~---~~~~~~~~~~~~~~~~  221 (285)
                                     +....|+.+|...+.+.+.++.++   ||+++.|.||.|.+|....   ..+.....+.......
T Consensus       146 ---------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~  210 (250)
T d1ydea1         146 ---------------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQ  210 (250)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTS
T ss_pred             ---------------cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcC
Confidence                           334679999999999998888774   8999999999997763111   1111112222222221


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC-CCce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD-AKGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~-~~~~-~~~~~~  261 (285)
                        ++     ..+..++|+|+++.+++.... ..|. +.+.|+
T Consensus       211 --pl-----~R~g~p~eva~~v~fL~Sda~~itG~~i~vDGG  245 (250)
T d1ydea1         211 --PL-----GRMGQPAEVGAAAVFLASEANFCTGIELLVTGG  245 (250)
T ss_dssp             --TT-----SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             --CC-----CCCCCHHHHHHHHHHHhCccCCCcCCeEEECCC
Confidence              22     268999999999999985321 2454 445543

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.92  E-value=1.2e-23  Score=169.76  Aligned_cols=220  Identities=12%  Similarity=0.073  Sum_probs=155.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC-ChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~   79 (285)
                      |..++|+||||||++.||..++++|+++|.+|+++.|+.+     ..+....+... ....++.++.+|++ +.++++++
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~   74 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVE-----NPTALAELKAI-NPKVNITFHTYDVTVPVAESKKL   74 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC-----CHHHHHHHHHH-CTTSEEEEEECCTTSCHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcc-----cHHHHHHHHhh-CCCCCEEEEEeecCCCHHHHHHH
Confidence            7778999999999999999999999999999999998872     21122222211 22457889999998 54556655


Q ss_pred             hc-------CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHh----c--CCccEEEEeccceeeeccCCCCcc
Q 023244           80 IA-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLK----S--GTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~--~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                      ++       .+|++||+||....  +.+ +..+++|+.++.++.+++.+    .  ++..++|++||..++.+.      
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~--~~~-~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~------  145 (254)
T d1sbya1          75 LKKIFDQLKTVDILINGAGILDD--HQI-ERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI------  145 (254)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCT--TCH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC------
T ss_pred             HHHHHHHcCCCCEEEeCCCCCCH--HHH-HHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCC------
Confidence            53       47999999997644  344 59999999998888777643    2  234789999998865333      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC--CCccHHHHHHHHhcC
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK--FAGSVRSSLALILGN  221 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~--~~~~~~~~~~~~~~~  221 (285)
                                      +....|+.||.....+.+.++.++   |++++.|.||.|.+|.....  .......+.....  
T Consensus       146 ----------------~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~--  207 (254)
T d1sbya1         146 ----------------HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL--  207 (254)
T ss_dssp             ----------------TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT--
T ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccc--
Confidence                            334679999999998888887764   89999999999998731110  0001011111111  


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~  261 (285)
                              .+....++++|++++.+++....+.++.+.++
T Consensus       208 --------~~~~~~~e~va~~~~~~~~~~~tG~vi~vdgG  239 (254)
T d1sbya1         208 --------SHPTQTSEQCGQNFVKAIEANKNGAIWKLDLG  239 (254)
T ss_dssp             --------TSCCEEHHHHHHHHHHHHHHCCTTCEEEEETT
T ss_pred             --------cCCCCCHHHHHHHHHHhhhCCCCCCEEEECCC
Confidence                    22467899999999999987654445666654

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=99.92  E-value=1e-23  Score=170.52  Aligned_cols=221  Identities=16%  Similarity=0.124  Sum_probs=153.7

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||++.||++++++|+++|++|++++|+.        +..+ ..+.+...+..+.++.+|+++.++++++++
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~--------~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~   75 (258)
T d1ae1a_           4 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNE--------KELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQ   75 (258)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHH
Confidence            3589999999999999999999999999999999986        2222 122222234578889999999998877764


Q ss_pred             --------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCC
Q 023244           82 --------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 --------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                              .+|++||+|+....     ...+.+...+++|+.++..+.+++.    +.+ ..++|++||..+..+.    
T Consensus        76 ~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~----  150 (258)
T d1ae1a_          76 TVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSAL----  150 (258)
T ss_dssp             HHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCC----
T ss_pred             HHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccc-cccccccccccccccc----
Confidence                    26999999997554     1223346889999999988877654    334 6799999998864332    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc--cHHHHHHHHh
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG--SVRSSLALIL  219 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~--~~~~~~~~~~  219 (285)
                                        +....|+.+|...+.+.+.+++++   ||++++|.||.+.+|........  ........+.
T Consensus       151 ------------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~  212 (258)
T d1ae1a_         151 ------------------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI  212 (258)
T ss_dssp             ------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH
T ss_pred             ------------------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHH
Confidence                              234679999999999999998874   79999999999998753322111  0111111111


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSS  260 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  260 (285)
                      . ..++     ..+..++|+|+++.+++....  ..|. +.+.+
T Consensus       213 ~-~~pl-----gR~~~pediA~~v~fL~S~~s~~itG~~i~vDG  250 (258)
T d1ae1a_         213 V-KTPM-----GRAGKPQEVSALIAFLCFPAASYITGQIIWADG  250 (258)
T ss_dssp             H-HSTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             h-cCCC-----CCCcCHHHHHHHHHHHhChhhCCCcCcEEEeCC
Confidence            1 1122     268999999999999995432  3565 34544

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=99.92  E-value=1.1e-24  Score=175.58  Aligned_cols=213  Identities=17%  Similarity=0.147  Sum_probs=153.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||++.||++++++|+++|++|++.+|+.        ++... .+++   +.++.++.+|++|+++++++++ 
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~   72 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD--------EEGAATAREL---GDAARYQHLDVTIEEDWQRVVAY   72 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHH
Confidence            579999999999999999999999999999999987        33332 3333   3478999999999998888875 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCcc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDM  146 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~  146 (285)
                            .+|++||+||....     ...+.++..+++|+.++..+.+++.    +.+ -.++|++||.....+.      
T Consensus        73 ~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~------  145 (254)
T d1hdca_          73 AREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGL------  145 (254)
T ss_dssp             HHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC------
T ss_pred             HHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccc------
Confidence                  47999999998554     1223345889999999888887764    344 5799999998765333      


Q ss_pred             cccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          147 MDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       147 ~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                      +....|+.||.+.+.+.+.++.++   ||++++|.||.+.+|....           .......
T Consensus       146 ----------------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~-----------~~~~~~~  198 (254)
T d1hdca_         146 ----------------ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-----------TGIRQGE  198 (254)
T ss_dssp             ----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----------HTCCCST
T ss_pred             ----------------cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchh-----------cCHHHHH
Confidence                            334679999999999999988774   7999999999997752110           0000000


Q ss_pred             cccc-ccCcce-eeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGF-LLNTSM-VHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~-~~~~~~-i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .... .....+ ..++|+|.++++++....  ..|. +.+.|+
T Consensus       199 ~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~i~vDGG  241 (254)
T d1hdca_         199 GNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDGG  241 (254)
T ss_dssp             TSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCceEEeCCC
Confidence            0000 011134 368999999999996443  3454 556554

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.92  E-value=2.2e-24  Score=174.62  Aligned_cols=220  Identities=20%  Similarity=0.171  Sum_probs=157.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|.+|||||++.||+++++.|+++|++|++.+|+.        +.... .+++...+.++.++.+|++|+++++++++  
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~   73 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGE--------EGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAV   73 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            57899999999999999999999999999999986        22222 22222234578999999999998888875  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh------cCCccEEEEeccceeeeccCCCCc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK------SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                           .+|++||+||....     ...+.++..+++|+.++.++.+++.+      .+ ..++|++||.....+.     
T Consensus        74 ~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~-----  147 (257)
T d2rhca1          74 VERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGV-----  147 (257)
T ss_dssp             HHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCC-----
T ss_pred             HHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-Cccccccccccccccc-----
Confidence                 47999999997554     12233468999999999999998754      33 5689999998765333     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC-------CCccHHHHH
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK-------FAGSVRSSL  215 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~-------~~~~~~~~~  215 (285)
                                       +....|+.||...+.+.+.++.++   ||++++|.||.|-+|.....       .........
T Consensus       148 -----------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~  210 (257)
T d2rhca1         148 -----------------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAF  210 (257)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHH
T ss_pred             -----------------ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHH
Confidence                             334679999999999999999885   69999999999977631110       000011111


Q ss_pred             HHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          216 ALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ..+.. ..++     ..+..++|+|+++++++....  ..|. +.+.|+
T Consensus       211 ~~~~~-~~Pl-----gR~~~pedia~~v~fL~S~~s~~itG~~i~vDGG  253 (257)
T d2rhca1         211 DRITA-RVPI-----GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG  253 (257)
T ss_dssp             HHHHT-TSTT-----SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHHHh-cCCC-----CCCcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            11111 1222     268999999999999996433  3454 445554

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=99.92  E-value=3.3e-24  Score=173.41  Aligned_cols=221  Identities=17%  Similarity=0.130  Sum_probs=155.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cC--CCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL--PGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      ++|+++||||++.||+.+++.|+++|++|++.+|+.        +...... ++  ...+.++..+.+|++|++++++++
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~   74 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSS--------EGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV   74 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHH
Confidence            578999999999999999999999999999999986        3222211 11  112347889999999999888877


Q ss_pred             c-------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|++||+||....      ...+.++..+++|+.++..+.+++.    +.+ -.++|++||..+..+.   
T Consensus        75 ~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~---  150 (258)
T d1iy8a_          75 TATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGI---  150 (258)
T ss_dssp             HHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBC---
T ss_pred             HHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCC---
Confidence            5       47999999996432      1223346899999999998887763    334 5799999998765332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----CCccHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----FAGSVRSSLA  216 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----~~~~~~~~~~  216 (285)
                                         +....|+.||...+.+.+.++.++   ||+++.|.||.+.+|.....    ..........
T Consensus       151 -------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~  211 (258)
T d1iy8a_         151 -------------------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAE  211 (258)
T ss_dssp             -------------------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHH
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHH
Confidence                               234679999999999998888774   79999999999987631110    0001111111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ... ...++     ..+..++|+|+++.+++....  ..|. +.+.|+
T Consensus       212 ~~~-~~~pl-----~R~~~p~dvA~~v~fL~S~~s~~itG~~i~VDGG  253 (258)
T d1iy8a_         212 EFI-QVNPS-----KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG  253 (258)
T ss_dssp             HHH-TTCTT-----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             HHH-hcCCC-----CCCcCHHHHHHHHHHHhCchhcCCcCceEEcCcc
Confidence            111 11222     268899999999999996433  3454 445544

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.92  E-value=5.5e-24  Score=172.01  Aligned_cols=218  Identities=18%  Similarity=0.189  Sum_probs=153.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +|.+|||||++.||+.++++|+++|++|++.+|+.        +....+ +++...+.++.++.+|++|+++++++++  
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~   72 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYND--------ATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQA   72 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHH
Confidence            35679999999999999999999999999999986        332221 2222234578899999999998888775  


Q ss_pred             -----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc
Q 023244           82 -----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                           .+|++||+||....     ...+.++..+++|+.++.++.+++.    +.+...++|++||.....+.       
T Consensus        73 ~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-------  145 (255)
T d1gega_          73 RKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-------  145 (255)
T ss_dssp             HHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC-------
T ss_pred             HHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC-------
Confidence                 47999999997543     1223345899999999988887753    34435789999998754332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHH------
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALI------  218 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~------  218 (285)
                                     +....|+.||...+.+.+.++.++   ||+++.|.||.+-+|....    .........      
T Consensus       146 ---------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~----~~~~~~~~~~~~~~~  206 (255)
T d1gega_         146 ---------------PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAE----IDRQVSEAAGKPLGY  206 (255)
T ss_dssp             ---------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHH----HHHHHHHHHTCCTTH
T ss_pred             ---------------cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhh----hhhhhHhhhcccchh
Confidence                           334679999999999998888774   8999999999997763110    000000000      


Q ss_pred             ----hcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          219 ----LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       219 ----~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                          .....+     ...+..++|+|+++++++....  ..|. +.+.|+
T Consensus       207 ~~~~~~~~~p-----l~R~~~peevA~~v~fL~S~~a~~itG~~i~vDGG  251 (255)
T d1gega_         207 GTAEFAKRIT-----LGRLSEPEDVAACVSYLASPDSDYMTGQSLLIDGG  251 (255)
T ss_dssp             HHHHHHTTCT-----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             HHHHHHhcCC-----CCCCcCHHHHHHHHHHHhCchhCCccCcEEEecCC
Confidence                011112     2368899999999999996433  2454 455554

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.92  E-value=1.4e-24  Score=174.17  Aligned_cols=215  Identities=17%  Similarity=0.149  Sum_probs=152.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      +.||||||++.||++++++|+++|++|++.+++.+       +..+.+. ++...+.++.++.+|++|+++++++++   
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~   74 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSA-------KAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAI   74 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCH-------HHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHH
Confidence            58999999999999999999999999998766541       2222221 111123478899999999998888775   


Q ss_pred             ----CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ----GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ----~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                          .+|++||+|+....     ...+.++..+++|+.++..+.+++    ++++ -.++|++||..+..+.        
T Consensus        75 ~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~--------  145 (244)
T d1edoa_          75 DAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGN--------  145 (244)
T ss_dssp             HHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCC--------
T ss_pred             HHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCC--------
Confidence                47999999997654     122334589999999988887765    3444 5799999998865433        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcccc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEY  225 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  225 (285)
                                    +....|+.||.+.+.+.+.++.++   ||++++|.||.+-+|.....    .......... ..++
T Consensus       146 --------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~----~~~~~~~~~~-~~pl  206 (244)
T d1edoa_         146 --------------IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILG-TIPL  206 (244)
T ss_dssp             --------------TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----CHHHHHHHHT-SCTT
T ss_pred             --------------CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHh----hHHHHHHHHh-cCCC
Confidence                          234679999999999998888774   89999999999987632221    1112222222 2233


Q ss_pred             ccccCcceeeHHHHHHHHHHhhcCCC---CCceE-EEec
Q 023244          226 GFLLNTSMVHVDDVARAHIFLLEYPD---AKGRY-ICSS  260 (285)
Q Consensus       226 ~~~~~~~~i~~~D~a~~~~~~~~~~~---~~~~~-~~~~  260 (285)
                      .     .+..++|+|+++.+++..+.   ..|.. .+.|
T Consensus       207 ~-----R~~~p~dvA~~v~fLa~S~~a~~itG~~i~vdG  240 (244)
T d1edoa_         207 G-----RTGQPENVAGLVEFLALSPAASYITGQAFTIDG  240 (244)
T ss_dssp             C-----SCBCHHHHHHHHHHHHHCSGGGGCCSCEEEEST
T ss_pred             C-----CCcCHHHHHHHHHHHHCCchhcCCcCCeEEeCC
Confidence            3     68899999999999974443   24544 4444

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.92  E-value=3.1e-24  Score=172.81  Aligned_cols=221  Identities=17%  Similarity=0.145  Sum_probs=155.3

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCC-CCCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP-GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .++|++|||||++.||+.+++.|+++|++|++++|+.        ++... .+++. ..+.++..+.+|++|++++++++
T Consensus         3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~   74 (251)
T d1vl8a_           3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL--------EEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   74 (251)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHH
Confidence            3579999999999999999999999999999999986        22211 11111 11347888999999999888877


Q ss_pred             c-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|++||+||.....     ..+.++..+++|+.++..+.+++.+    .+ -.++|++||.......    
T Consensus        75 ~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~----  149 (251)
T d1vl8a_          75 EAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVT----  149 (251)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCC----
T ss_pred             HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhcccc----
Confidence            5       479999999975441     2233358899999998888877643    34 5799999986542221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                       .+....|+.||.+.+.+.+.++.++   ||++++|.||.+-++........ ... ...... 
T Consensus       150 -----------------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~-~~~-~~~~~~-  209 (251)
T d1vl8a_         150 -----------------MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD-PEK-LDYMLK-  209 (251)
T ss_dssp             -----------------SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC-HHH-HHHHHH-
T ss_pred             -----------------CccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCC-HHH-HHHHHh-
Confidence                             1234579999999999999888774   79999999999988753221111 111 111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ..++.     .+..++|+|+++++++....  ..|. +.+.|+
T Consensus       210 ~~pl~-----R~~~pedvA~~v~fL~S~~a~~itG~~i~vDGG  247 (251)
T d1vl8a_         210 RIPLG-----RTGVPEDLKGVAVFLASEEAKYVTGQIIFVDGG  247 (251)
T ss_dssp             TCTTS-----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             cCCCC-----CCCCHHHHHHHHHHHhCchhCCCcCcEEEeCcC
Confidence            12222     67899999999999996443  2454 445544

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=99.92  E-value=3.4e-24  Score=173.67  Aligned_cols=220  Identities=15%  Similarity=0.145  Sum_probs=155.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|++|||||++.||+++++.|+++|++|++++|+.        +.... .+++...+.++..+.+|++|+++++++++ 
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~--------~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   75 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNR--------EALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS   75 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999976        22222 22222334578999999999998888775 


Q ss_pred             ------CCCEEEEecccCCC------CCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 ------GCTGVLHVATPVDF------EDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 ------~~d~vih~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                            .+|++||+||....      ...+.++..+++|+.++..+.+++.    +++ -.++|++||..+..+.     
T Consensus        76 ~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~-----  149 (260)
T d1zema1          76 VVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGP-----  149 (260)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCC-----
T ss_pred             HHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCC-----
Confidence                  47999999996432      1223345889999999888877763    334 5799999998765433     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC------------CCcc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK------------FAGS  210 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~------------~~~~  210 (285)
                                       +....|+.||...+.+.+.++.++   ||+++.|.||.|.++.....            ....
T Consensus       150 -----------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  212 (260)
T d1zema1         150 -----------------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTD  212 (260)
T ss_dssp             -----------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSS
T ss_pred             -----------------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccC
Confidence                             234679999999999999888774   79999999999987631100            0001


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEec
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSS  260 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~  260 (285)
                      .......+... .++     ..+..++|+|.++.+++....  ..|. +.+.|
T Consensus       213 ~~~~~~~~~~~-~Pl-----~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDG  259 (260)
T d1zema1         213 PKVVAQQMIGS-VPM-----RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAG  259 (260)
T ss_dssp             HHHHHHHHHHT-STT-----SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred             HHHHHHHHHhc-CCC-----CCCcCHHHHHHHHHHHhCchhcCccCCeEEeCC
Confidence            11111111111 122     268899999999999996433  2344 44544

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.91  E-value=2.1e-24  Score=182.87  Aligned_cols=227  Identities=15%  Similarity=0.076  Sum_probs=157.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh-HHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG-FDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~   82 (285)
                      ++|+|+|||||||||++|+++|+++||+|+++.|++     .+ .....+...    .+++++.+|+.|..+ +..++++
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~-----~~-~~~~~~~~~----~~v~~~~gD~~d~~~~~~~a~~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSL-----KG-LIAEELQAI----PNVTLFQGPLLNNVPLMDTLFEG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCS-----CS-HHHHHHHTS----TTEEEEESCCTTCHHHHHHHHTT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCc-----ch-hhhhhhccc----CCCEEEEeeCCCcHHHHHHHhcC
Confidence            478999999999999999999999999999999987     11 122222222    379999999998654 6778888


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcC
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLD  162 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~  162 (285)
                      +|++++.......           .++..+.++++++++.+ ++++++.||........                    .
T Consensus        72 ~~~~~~~~~~~~~-----------~~~~~~~~~~~aa~~ag-v~~~v~~Ss~~~~~~~~--------------------~  119 (350)
T d1xgka_          72 AHLAFINTTSQAG-----------DEIAIGKDLADAAKRAG-TIQHYIYSSMPDHSLYG--------------------P  119 (350)
T ss_dssp             CSEEEECCCSTTS-----------CHHHHHHHHHHHHHHHS-CCSEEEEEECCCGGGTS--------------------S
T ss_pred             CceEEeecccccc-----------hhhhhhhHHHHHHHHhC-CCceEEEeeccccccCC--------------------c
Confidence            8988876442111           23556788999999999 88888888865321110                    1


Q ss_pred             CCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc---cccccccCcceeeH-HH
Q 023244          163 SWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR---EEYGFLLNTSMVHV-DD  238 (285)
Q Consensus       163 ~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~i~~-~D  238 (285)
                      .+..+|..+|...|.++.    +.+++++++||+.++++............  ....+..   .+...+..+.++++ +|
T Consensus       120 ~~~~~~~~~k~~~~~~~~----~~~~~~~~vr~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~D  193 (350)
T d1xgka_         120 WPAVPMWAPKFTVENYVR----QLGLPSTFVYAGIYNNNFTSLPYPLFQME--LMPDGTFEWHAPFDPDIPLPWLDAEHD  193 (350)
T ss_dssp             CCCCTTTHHHHHHHHHHH----TSSSCEEEEEECEEGGGCBSSSCSSCBEE--ECTTSCEEEEESSCTTSCEEEECHHHH
T ss_pred             ccchhhhhhHHHHHHHHH----hhccCceeeeeceeecccccccccccccc--ccccccceeeecccCCCcceEEEeHHH
Confidence            123458888888877654    45799999999998875432221111000  0001111   11223556778876 79


Q ss_pred             HHHHHHHhhcCCC--CCc-eEEEeccccCHHHHHHHHHhhCCC
Q 023244          239 VARAHIFLLEYPD--AKG-RYICSSHTLTIQEMAEFLSAKYPE  278 (285)
Q Consensus       239 ~a~~~~~~~~~~~--~~~-~~~~~~~~~s~~e~~~~i~~~~~~  278 (285)
                      ++.++..++..+.  ..| .|+++++.+|+.|+++.+.+.+|+
T Consensus       194 va~~v~~~l~~~~~~~~G~~~~~~g~~~T~~eia~~l~~~~G~  236 (350)
T d1xgka_         194 VGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR  236 (350)
T ss_dssp             HHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhCChhhcCCeEEEEeCCcCCHHHHHHHHHHHHCC
Confidence            9999999987542  234 678888889999999999999886

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.91  E-value=1.2e-23  Score=168.17  Aligned_cols=196  Identities=14%  Similarity=0.103  Sum_probs=147.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCe-------EEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYS-------VTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      +.||||||++.||++++++|+++|++       |++.+|+.        +.... ..++...+.++.++.+|++|.++++
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~--------~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~   73 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTA--------ADLEKISLECRAEGALTDTITADISDMADVR   73 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCH--------HHHHHHHHHHHTTTCEEEEEECCTTSHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCH--------HHHHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            45899999999999999999999987       78888876        33222 2222233457889999999999888


Q ss_pred             HHhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccC
Q 023244           78 AAIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        78 ~~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                      ++++       .+|++||+||.....     ..+.++..+++|+.++..+.+++    ++++ -+++|++||..+..+. 
T Consensus        74 ~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~-  151 (240)
T d2bd0a1          74 RLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAF-  151 (240)
T ss_dssp             HHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-
T ss_pred             HHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCC-
Confidence            8775       379999999986541     22334689999999988877665    4444 5799999998765333 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH---cCCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE---HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                           +....|+.||++.+.+.+.++.+   +|++++.+.||.+.+|........         
T Consensus       152 ---------------------~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~---------  201 (240)
T d2bd0a1         152 ---------------------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE---------  201 (240)
T ss_dssp             ---------------------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST---------
T ss_pred             ---------------------CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh---------
Confidence                                 33467999999999999888877   489999999999988753221000         


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                                ....+..++|+|+++++++..+.
T Consensus       202 ----------~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         202 ----------MQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             ----------TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             ----------hHhcCCCHHHHHHHHHHHHcCCc
Confidence                      01145778999999999998764

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.91  E-value=4e-24  Score=172.37  Aligned_cols=220  Identities=15%  Similarity=0.096  Sum_probs=152.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++|+++||||++.||+++++.|+++|++|++.+|+.        +....+ +++   +.+..++.+|++|.++++++++ 
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~--------~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~   73 (253)
T d1hxha_           5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINE--------AAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAA   73 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHH
Confidence            478999999999999999999999999999999976        333222 222   3478889999999988888775 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                            .+|++||+||....     ...+.++..+++|+.++..+.+++.+.  .+-.++|++||..+..+.        
T Consensus        74 ~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~--------  145 (253)
T d1hxha_          74 VQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI--------  145 (253)
T ss_dssp             HHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC--------
T ss_pred             HHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc--------
Confidence                  47999999997553     112334688999999888877776432  113799999998764332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                    +....|+.||...+.+.+.++.++     +|+++.|.||.+.+|......+....  .........
T Consensus       146 --------------~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~--~~~~~~~~~  209 (253)
T d1hxha_         146 --------------EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVS--KEMVLHDPK  209 (253)
T ss_dssp             --------------TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCC--HHHHBCBTT
T ss_pred             --------------cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhh--HHHHHhCcc
Confidence                          234679999999888888777553     59999999999987632111110000  011111111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .   ...-.+..++|+|+++++++....  ..|. +.+.|+
T Consensus       210 ~---~~~gr~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  247 (253)
T d1hxha_         210 L---NRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS  247 (253)
T ss_dssp             T---BTTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred             c---cccCCCCCHHHHHHHHHHHhChhhCCCcCcEEEECcc
Confidence            0   112268899999999999996433  2454 456554

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=99.91  E-value=9e-24  Score=169.17  Aligned_cols=214  Identities=21%  Similarity=0.198  Sum_probs=153.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||++.||+.++++|+++|++|++.+|+.        ++... ..++   +.++.++++|++++++++++++ 
T Consensus         4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~--------~~~~~~~~~~---~~~~~~~~~Dls~~~~i~~~~~~   72 (241)
T d2a4ka1           4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREE--------RLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAE   72 (241)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHc---CCceEEEEecCCCHHHHHHHHHH
Confidence            579999999999999999999999999999999987        33332 3333   3578899999999998888775 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKSG-TVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|++||+|+....     ...+.++..+++|+.+...+.+++.+.- .-+.++.+||.+.. ..         
T Consensus        73 i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~-~~---------  142 (241)
T d2a4ka1          73 ALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GA---------  142 (241)
T ss_dssp             HHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CH---------
T ss_pred             HHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeeccccccc-cc---------
Confidence                  47999999987543     1223345889999999999999877653 23345555544321 11         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYG  226 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
                                   +....|+.+|++.|.+.+.+++++   |+++++|.||.+-++.....    ........... .+..
T Consensus       143 -------------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~----~~~~~~~~~~~-~p~~  204 (241)
T d2a4ka1         143 -------------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL----PPWAWEQEVGA-SPLG  204 (241)
T ss_dssp             -------------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS----CHHHHHHHHHT-STTC
T ss_pred             -------------cCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh----hHhHHHHHHhC-CCCC
Confidence                         123569999999999999999885   69999999999977643321    11111211111 2222


Q ss_pred             cccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          227 FLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       227 ~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                           .+..++|+|+++.+++....  ..|. +.++|+
T Consensus       205 -----r~~~p~dva~~v~fL~S~~s~~itG~~i~vDGG  237 (241)
T d2a4ka1         205 -----RAGRPEEVAQAALFLLSEESAYITGQALYVDGG  237 (241)
T ss_dssp             -----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -----CCcCHHHHHHHHHHHhcchhCCCcCceEEeCCC
Confidence                 68899999999999996433  3454 345443

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.9e-23  Score=167.58  Aligned_cols=214  Identities=15%  Similarity=0.057  Sum_probs=151.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC--CCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG--ASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .+|++|||||++.||+++++.|+++|++|++++|+.        +.... ..++..  ...++.++.+|++|.+++++++
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~   73 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL--------EAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF   73 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHH
Confidence            378999999999999999999999999999999986        22222 122211  2357889999999999888877


Q ss_pred             c-------CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHH----hc--CCccEEEEeccceeeeccCCCCccc
Q 023244           81 A-------GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL----KS--GTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~--~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      +       .+|++||+|+....  .++ +..+++|+.++.++.+++.    ++  +...++|++||..+..+.       
T Consensus        74 ~~~~~~~G~iDilVnnAg~~~~--~~~-~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~-------  143 (254)
T d2gdza1          74 RKVVDHFGRLDILVNNAGVNNE--KNW-EKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV-------  143 (254)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCS--SSH-HHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-------
T ss_pred             HHHHHHcCCcCeeccccccccc--ccc-hheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC-------
Confidence            5       47999999998665  244 5889999988777666653    33  223679999998764332       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHH--HHH---HcCCcEEEeccCceecCCCCCCCC--------ccHHHH
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALE--FAE---EHGLDLVTLIPSMVVGPFICPKFA--------GSVRSS  214 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~--~~~---~~~i~~~i~Rp~~v~g~~~~~~~~--------~~~~~~  214 (285)
                                     +....|+.||...+.+.+.  ++.   ..||++++|.||.|-+|.......        .....+
T Consensus       144 ---------------~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  208 (254)
T d2gdza1         144 ---------------AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHI  208 (254)
T ss_dssp             ---------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHH
T ss_pred             ---------------CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHH
Confidence                           2346799999999888764  333   358999999999997763211100        001111


Q ss_pred             HHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEec
Q 023244          215 LALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSS  260 (285)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~  260 (285)
                      ...     .+     ...+..++|+|+++++++.+....|. ..+.+
T Consensus       209 ~~~-----~p-----~~r~~~pedvA~~v~fL~s~~~itG~~i~VdG  245 (254)
T d2gdza1         209 KDM-----IK-----YYGILDPPLIANGLITLIEDDALNGAIMKITT  245 (254)
T ss_dssp             HHH-----HH-----HHCCBCHHHHHHHHHHHHHCTTCSSCEEEEET
T ss_pred             Hhc-----CC-----CCCCcCHHHHHHHHHHHHcCCCCCCCEEEECC
Confidence            111     11     12578899999999999987665665 44554

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.90  E-value=8.3e-23  Score=162.90  Aligned_cols=210  Identities=14%  Similarity=0.068  Sum_probs=148.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~   82 (285)
                      ++|++|||||++.||+.+++.|+++|++|++++|+.        +.   +++.     ..+++.+|+++. +.+.+-+..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~--------~~---l~~~-----~~~~~~~Dv~~~~~~~~~~~g~   66 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE--------EL---LKRS-----GHRYVVCDLRKDLDLLFEKVKE   66 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH--------HH---HHHT-----CSEEEECCTTTCHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HH---HHhc-----CCcEEEcchHHHHHHHHHHhCC
Confidence            579999999999999999999999999999999976        22   2222     346778999864 344444557


Q ss_pred             CCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccccCCCC
Q 023244           83 CTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDETFWS  153 (285)
Q Consensus        83 ~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~  153 (285)
                      +|++||+||....     ...+.++..+++|+.++..+.+++    ++.+ ..++|++||.......             
T Consensus        67 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~-------------  132 (234)
T d1o5ia_          67 VDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPI-------------  132 (234)
T ss_dssp             CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-------------
T ss_pred             CcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccc-------------
Confidence            9999999987543     122233588899999887777665    4444 5799999998654322             


Q ss_pred             chhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccC
Q 023244          154 DVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLN  230 (285)
Q Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
                               +....|+.+|.+.+.+.+.++.++   ||++++|.||.+.++........   ...... ....++.    
T Consensus       133 ---------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~---~~~~~~-~~~~pl~----  195 (234)
T d1o5ia_         133 ---------ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSE---EKKKQV-ESQIPMR----  195 (234)
T ss_dssp             ---------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCH---HHHHHH-HTTSTTS----
T ss_pred             ---------cccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCH---HHHHHH-HhcCCCC----
Confidence                     334679999999999988888774   79999999999987753221111   111111 1222333    


Q ss_pred             cceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          231 TSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       231 ~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       .+..++|+|.++.+++....  ..|. +.++|+
T Consensus       196 -R~~~pediA~~v~fL~S~~s~~itG~~i~vDGG  228 (234)
T d1o5ia_         196 -RMAKPEEIASVVAFLCSEKASYLTGQTIVVDGG  228 (234)
T ss_dssp             -SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -CCcCHHHHHHHHHHHhChhhcCCcCcEEEECcc
Confidence             68999999999999996433  2454 445554

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=1.8e-23  Score=169.38  Aligned_cols=221  Identities=14%  Similarity=0.076  Sum_probs=150.0

Q ss_pred             CCCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            3 EGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         3 ~~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .++|++|||||+|  .||++++++|+++|++|++.+|+.        +......+......+..++.+|++|++++++++
T Consensus         6 L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   77 (256)
T d1ulua_           6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE--------RLRPEAEKLAEALGGALLFRADVTQDEELDALF   77 (256)
T ss_dssp             CTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcH--------HHHHHHHHhhhccCcccccccccCCHHHHHHHH
Confidence            3679999999998  799999999999999999888875        222222221112236678999999999888877


Q ss_pred             c-------CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCC
Q 023244           81 A-------GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      +       .+|++||+|+....         .....+...+++|+.+...+.+++... .+-+++|++||..+....   
T Consensus        78 ~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~---  154 (256)
T d1ulua_          78 AGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVV---  154 (256)
T ss_dssp             HHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBC---
T ss_pred             HHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCC---
Confidence            5       47999999986431         111223478899999999999887643 113689999998764332   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         +....|+.||.+.+.+.+.++.++   ||+++++.||.+..+....... .......... 
T Consensus       155 -------------------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~-~~~~~~~~~~-  213 (256)
T d1ulua_         155 -------------------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG-FTKMYDRVAQ-  213 (256)
T ss_dssp             -------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------CHHHHHHHHH-
T ss_pred             -------------------CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhh-hHHHHHHHHh-
Confidence                               345679999999999999988874   7999999999998765332211 1111111111 


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       ..++.     .+..++|+|+++.+++....  ..|. +.+.++
T Consensus       214 -~~pl~-----R~~~pedvA~~v~fL~S~~s~~itG~~i~VDGG  251 (256)
T d1ulua_         214 -TAPLR-----RNITQEEVGNLGLFLLSPLASGITGEVVYVDAG  251 (256)
T ss_dssp             -HSTTS-----SCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -cCCCC-----CCcCHHHHHHHHHHHhCchhCCccCCeEEECcC
Confidence             12222     68899999999999996543  3454 445443

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.90  E-value=3.5e-23  Score=168.17  Aligned_cols=226  Identities=17%  Similarity=0.145  Sum_probs=148.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|.+|||||++.||++++++|+++|++|++++|+..    ...+....+........++.++.+|++|.++++++++  
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~----~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~   79 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAE----RLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT   79 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHH
Confidence            5789999999999999999999999999999999861    0111222232322233479999999999998888775  


Q ss_pred             -----CCCEEEEecccCCC-------C--CCChHHHHHHHHHHHHHHHHHHHHhc--CCccEEEEecccee-eeccCCCC
Q 023244           82 -----GCTGVLHVATPVDF-------E--DKEPEEVITQRAINGTLGILKSCLKS--GTVKRVVYTSSNAA-VFYNDKDV  144 (285)
Q Consensus        82 -----~~d~vih~a~~~~~-------~--~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~SS~~~-~~~~~~~~  144 (285)
                           .+|++||+||....       .  ..+.++..+++|+.++..+.+++.+.  .....+|.++|... ..+.    
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~----  155 (264)
T d1spxa_          80 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHAT----  155 (264)
T ss_dssp             HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCC----
T ss_pred             HHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccC----
Confidence                 47999999987432       0  11223588999999988887776432  00246666666543 2221    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC-C-cc---HHHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF-A-GS---VRSSLA  216 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~-~-~~---~~~~~~  216 (285)
                                        +....|+.||.+.+.+.+.++.++   ||+++.|.||.|-++...... + ..   ......
T Consensus       156 ------------------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~  217 (264)
T d1spxa_         156 ------------------PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMA  217 (264)
T ss_dssp             ------------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHH
T ss_pred             ------------------CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHH
Confidence                              234579999999999998888774   899999999999877432210 0 00   011111


Q ss_pred             HHhcCccccccccCcceeeHHHHHHHHHHhhcCC---CCCce-EEEecc
Q 023244          217 LILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP---DAKGR-YICSSH  261 (285)
Q Consensus       217 ~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~-~~~~~~  261 (285)
                      .. ....+..     .+..++|+|+++.+++.++   -..|. +.+.|+
T Consensus       218 ~~-~~~~Pl~-----R~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG  260 (264)
T d1spxa_         218 TM-KECVPAG-----VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGG  260 (264)
T ss_dssp             HH-HHHCTTS-----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HH-HhcCCCC-----CCcCHHHHHHHHHHHhCCcccCCccCceEEeCCC
Confidence            11 1112222     6889999999999999633   13454 455543

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=99.90  E-value=3.6e-23  Score=168.99  Aligned_cols=221  Identities=19%  Similarity=0.209  Sum_probs=155.2

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      |..++|++|||||++.||++++++|+++|++|++++|+.        ++...+.+.  .+.++..+.+|+++.+++++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~--------~~l~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~   70 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSA--------ERLAELETD--HGDNVLGIVGDVRSLEDQKQAA   70 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH--HGGGEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHH--cCCCeeEEecccccHHHHHHHH
Confidence            777789999999999999999999999999999999986        333322211  1347889999999999888876


Q ss_pred             c-------CCCEEEEecccCCCC-------CCC---hHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeec
Q 023244           81 A-------GCTGVLHVATPVDFE-------DKE---PEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFY  139 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~-------~~~---~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~  139 (285)
                      +       .+|++||+||.....       .+.   .++..+++|+.++..+.+++.    +.+  .++|++||..+..+
T Consensus        71 ~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~  148 (276)
T d1bdba_          71 SRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYP  148 (276)
T ss_dssp             HHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTST
T ss_pred             HHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccC
Confidence            5       479999999975431       111   135889999999888777653    444  68999998765432


Q ss_pred             cCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc--CCcEEEeccCceecCCCCCCCCccHH-----
Q 023244          140 NDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH--GLDLVTLIPSMVVGPFICPKFAGSVR-----  212 (285)
Q Consensus       140 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~i~~~i~Rp~~v~g~~~~~~~~~~~~-----  212 (285)
                      .                      +....|+.||...+.+.+.++.++  +|+++.|.||.|-++...........     
T Consensus       149 ~----------------------~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~  206 (276)
T d1bdba_         149 N----------------------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAIST  206 (276)
T ss_dssp             T----------------------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC--------
T ss_pred             C----------------------CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCc
Confidence            2                      234579999999999998888775  59999999999987643222111100     


Q ss_pred             -HHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC---CCCce-EEEecc
Q 023244          213 -SSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP---DAKGR-YICSSH  261 (285)
Q Consensus       213 -~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~-~~~~~~  261 (285)
                       ..... .....++.     .+..++|+|+++++++..+   -..|. +++.|+
T Consensus       207 ~~~~~~-~~~~~Plg-----R~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG  254 (276)
T d1bdba_         207 VPLADM-LKSVLPIG-----RMPEVEEYTGAYVFFATRGDAAPATGALLNYDGG  254 (276)
T ss_dssp             -CHHHH-HTTTCTTS-----SCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSS
T ss_pred             HHHHHH-HHhcCCCC-----CCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcC
Confidence             01111 12222333     6889999999999988522   23454 455543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.90  E-value=1.5e-22  Score=165.21  Aligned_cols=226  Identities=14%  Similarity=0.027  Sum_probs=155.6

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .++|++|||||++.||++++++|+++|++|++++|+..       +.... ...+...+.++.++.+|++|++++.++++
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANST-------ESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCch-------HHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence            46799999999999999999999999999999998751       22221 11122224578999999999998888775


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                             .+|++||+++....     ...+.+...+++|+.++..+++++.+. ..-+++++++|.......        
T Consensus        89 ~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~--------  160 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA--------  160 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS--------
T ss_pred             HHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc--------
Confidence                   47999999987654     122334588999999999999988754 223578888776532221        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCC-------C-CCccHHHHHHH
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP-------K-FAGSVRSSLAL  217 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~-------~-~~~~~~~~~~~  217 (285)
                                   .+....|+.+|.+.+.+.+.++.++   ||+++.|.||.+-++....       . ...........
T Consensus       161 -------------~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  227 (272)
T d1g0oa_         161 -------------VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEY  227 (272)
T ss_dssp             -------------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHH
T ss_pred             -------------ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHH
Confidence                         1334679999999999999888774   8999999999997652100       0 00011111111


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      ......++.     .+..++|+|.++.+++....  ..|. ..++|+
T Consensus       228 ~~~~~~Plg-----R~~~peevA~~v~fL~s~~s~~itG~~i~vDGG  269 (272)
T d1g0oa_         228 AAVQWSPLR-----RVGLPIDIARVVCFLASNDGGWVTGKVIGIDGG  269 (272)
T ss_dssp             HHHHSCTTC-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             HHHccCCCC-----CCcCHHHHHHHHHHHhCchhcCccCceEeECCC
Confidence            111122222     68999999999999996543  2455 345554

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9e-23  Score=164.84  Aligned_cols=212  Identities=17%  Similarity=0.145  Sum_probs=148.8

Q ss_pred             CC-CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh----hhcCCCCCCCEEEEecCCCChhh
Q 023244            1 ME-EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF----LKNLPGASERLRIFHADLSHPDG   75 (285)
Q Consensus         1 M~-~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~   75 (285)
                      |. .++|++|||||++.||.++++.|+++|++|++.+|+.        ++...    +... ....++.++.+|++++++
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~--------~~l~~~~~~l~~~-~~~~~~~~~~~Dls~~~~   75 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTV--------GNIEELAAECKSA-GYPGTLIPYRCDLSNEED   75 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHT-TCSSEEEEEECCTTCHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhc-CCCceEEEEEccCCCHHH
Confidence            44 3578999999999999999999999999999999986        33222    2221 123478899999999998


Q ss_pred             HHHHhc-------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHH----hcC-CccEEEEeccceeee
Q 023244           76 FDAAIA-------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCL----KSG-TVKRVVYTSSNAAVF  138 (285)
Q Consensus        76 ~~~~~~-------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~~v~~SS~~~~~  138 (285)
                      ++++++       .+|++||+|+....     ...+.++..+++|+.+...+.+++.    +.+ .-.++|++||.+...
T Consensus        76 v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~  155 (257)
T d1xg5a_          76 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR  155 (257)
T ss_dssp             HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred             HHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC
Confidence            888765       47999999997553     1223346889999998888766653    332 247999999987542


Q ss_pred             ccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHH
Q 023244          139 YNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRS  213 (285)
Q Consensus       139 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~  213 (285)
                      ..+                    ......|+.+|...+.+.+.++.+     .+++++++.||.+-++............
T Consensus       156 ~~p--------------------~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~  215 (257)
T d1xg5a_         156 VLP--------------------LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEK  215 (257)
T ss_dssp             CCS--------------------CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHH
T ss_pred             CCC--------------------CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHH
Confidence            221                    012346999999999999888764     4799999999988665311111111111


Q ss_pred             HHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          214 SLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .....     +     ...++.++|+|+++++++..+.
T Consensus       216 ~~~~~-----~-----~~r~~~pedvA~~v~fL~s~~a  243 (257)
T d1xg5a_         216 AAATY-----E-----QMKCLKPEDVAEAVIYVLSTPA  243 (257)
T ss_dssp             HHHHH-----C--------CBCHHHHHHHHHHHHHSCT
T ss_pred             HHhcC-----C-----CCCCcCHHHHHHHHHHHhCChh
Confidence            11111     1     2258899999999999998764

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=99.90  E-value=8e-23  Score=165.62  Aligned_cols=225  Identities=19%  Similarity=0.098  Sum_probs=154.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .+|++|||||++.||.+++++|+++|++|++..++..       +..+. .+++...+.++..+.+|++|.++++++++ 
T Consensus         5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   77 (259)
T d1ja9a_           5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSS-------KAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDK   77 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCCh-------HHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHH
Confidence            5799999999999999999999999999998877651       22111 11222234578999999999998888775 


Q ss_pred             ------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCccccc
Q 023244           82 ------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                            .+|++||+||....     ...+.++..+++|+.+...+++++.+. .+-++++.++|.......         
T Consensus        78 ~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~---------  148 (259)
T d1ja9a_          78 AVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTG---------  148 (259)
T ss_dssp             HHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCS---------
T ss_pred             HHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccC---------
Confidence                  47999999998654     122334688999999999988887653 113466666665432211         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCC---------CCCCCccHHHHHHH
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFI---------CPKFAGSVRSSLAL  217 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~---------~~~~~~~~~~~~~~  217 (285)
                                  .+....|+.+|...+.+.+.++.++   ||++++|.||.+.++..         ..........+...
T Consensus       149 ------------~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (259)
T d1ja9a_         149 ------------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEG  216 (259)
T ss_dssp             ------------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHH
T ss_pred             ------------CCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHH
Confidence                        1234579999999999999988774   89999999999976521         01111112222222


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEeccc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSHT  262 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~~  262 (285)
                      .... .++     ..+..++|+|+++.+++.+..  -.|. +.+.++.
T Consensus       217 ~~~~-~pl-----~R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         217 LANM-NPL-----KRIGYPADIGRAVSALCQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHT-STT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred             HHhC-CCC-----CCCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence            2221 222     268999999999999997654  2454 4566543

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.5e-23  Score=167.86  Aligned_cols=198  Identities=15%  Similarity=0.086  Sum_probs=148.1

Q ss_pred             CCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            2 EEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         2 ~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +..+|.++||||++.||++++++|+++|++|++.+|+.        ++...+ +++...+.++..+.+|++|.+++++++
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~--------~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~   75 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK--------HGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSA   75 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHH
Confidence            34689999999999999999999999999999999987        332222 122223458999999999999888877


Q ss_pred             c-------CCCEEEEecccCCCCC-----CChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCC
Q 023244           81 A-------GCTGVLHVATPVDFED-----KEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        81 ~-------~~d~vih~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~  144 (285)
                      +       .+|++||+||......     .+.++.++++|+.++.++.+++    ++.+ -+++|++||..+..+.    
T Consensus        76 ~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~----  150 (244)
T d1yb1a_          76 KKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSV----  150 (244)
T ss_dssp             HHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCH----
T ss_pred             HHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCC----
Confidence            5       4799999999866521     1223588999999988877765    3444 6799999999865333    


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH------cCCcEEEeccCceecCCCCCCCCccHHHHHHHH
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE------HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALI  218 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~------~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~  218 (285)
                                        +....|+.||++.+.+.+.++.+      .|++++++.||.|-++.....    .       
T Consensus       151 ------------------~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~----~-------  201 (244)
T d1yb1a_         151 ------------------PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----S-------  201 (244)
T ss_dssp             ------------------HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----H-------
T ss_pred             ------------------CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc----C-------
Confidence                              23457999999999888888765      379999999999977642211    0       


Q ss_pred             hcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          219 LGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       219 ~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                          ...     ..++.++|+|+.++..+..+
T Consensus       202 ----~~~-----~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         202 ----TSL-----GPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             ----HHH-----CCCCCHHHHHHHHHHHHHTT
T ss_pred             ----ccc-----cCCCCHHHHHHHHHHHHhcC
Confidence                011     14567899999999888764

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=9.3e-23  Score=163.61  Aligned_cols=221  Identities=15%  Similarity=0.143  Sum_probs=156.4

Q ss_pred             CC-CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            1 ME-EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~-~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |. ..+|++|||||++.||+++++.|+++|++|++.+|++        ++.+.+.+.    .+++....|+.+.+.++..
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~--------~~l~~~~~~----~~~~~~~~d~~~~~~~~~~   68 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINE--------SKLQELEKY----PGIQTRVLDVTKKKQIDQF   68 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHGGGGGS----TTEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHhc----cCCceeeeecccccccccc
Confidence            54 4679999999999999999999999999999999986        344443332    3678888999888776666


Q ss_pred             hc---CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCccc
Q 023244           80 IA---GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVDMM  147 (285)
Q Consensus        80 ~~---~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~~~  147 (285)
                      .+   .+|++||+||.....     ..+.++..+++|+.++..+.+++.+    .+ ..++|++||.......       
T Consensus        69 ~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~-------  140 (245)
T d2ag5a1          69 ANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKG-------  140 (245)
T ss_dssp             HHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBC-------
T ss_pred             ccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCC-------
Confidence            54   589999999986541     2233468899999999998887653    33 5799999987532111       


Q ss_pred             ccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCC--CccHHHHHHHHhcCc
Q 023244          148 DETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKF--AGSVRSSLALILGNR  222 (285)
Q Consensus       148 ~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~--~~~~~~~~~~~~~~~  222 (285)
                                    .+....|+.+|...+.+++.++.++   ||++++|.||.+.+|......  ............. .
T Consensus       141 --------------~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~-~  205 (245)
T d2ag5a1         141 --------------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLK-R  205 (245)
T ss_dssp             --------------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHH-T
T ss_pred             --------------ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHh-c
Confidence                          1234679999999999999998874   799999999999886422110  0011111111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .++     ..+..++|+|+++.+++....  ..|. +.++++
T Consensus       206 ~pl-----~R~~~pedva~~v~fL~s~~s~~iTG~~i~VDGG  242 (245)
T d2ag5a1         206 QKT-----GRFATAEEIAMLCVYLASDESAYVTGNPVIIDGG  242 (245)
T ss_dssp             CTT-----SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             CCC-----CCCcCHHHHHHHHHHHhChhhCCCcCceEEeCCC
Confidence            222     268999999999999997543  3455 445443

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=99.90  E-value=3e-23  Score=168.17  Aligned_cols=229  Identities=16%  Similarity=0.153  Sum_probs=155.4

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhHHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |+.++|++|||||++.||+.++++|+++|++|++++|+..       +..+..+++. ..+.++..+.+|++|+++++++
T Consensus         5 m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~-------~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~   77 (260)
T d1h5qa_           5 ISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAA-------DAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKT   77 (260)
T ss_dssp             ECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCT-------THHHHHHHHHHHHTCCEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH-------HHHHHHHHHHHHhCCceEEEEccCCCHHHHHHH
Confidence            4567899999999999999999999999999999999871       1111111111 1134788999999999988888


Q ss_pred             hc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCC
Q 023244           80 IA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~  143 (285)
                      ++       .+|++||+|+.....     ..+.++..+++|+.++..+.+++.    +.+....++.+||..........
T Consensus        78 ~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~  157 (260)
T d1h5qa_          78 IQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSS  157 (260)
T ss_dssp             HHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEE
T ss_pred             HHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccc
Confidence            75       479999999875431     222345889999999888776653    33325567777776532111000


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                         +.            ..+....|+.+|.+.+.+.+.++.++   ||++++|.||.+-++......    .........
T Consensus       158 ---~~------------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~----~~~~~~~~~  218 (260)
T d1h5qa_         158 ---LN------------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMD----KKIRDHQAS  218 (260)
T ss_dssp             ---TT------------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSC----HHHHHHHHH
T ss_pred             ---cc------------cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccC----HHHHHHHHh
Confidence               00            01234679999999999998888764   799999999999876533221    111121111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       ..++.     .+..++|+|+++++++....  ..|. +.+.|+
T Consensus       219 -~~pl~-----R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG  256 (260)
T d1h5qa_         219 -NIPLN-----RFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG  256 (260)
T ss_dssp             -TCTTS-----SCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred             -cCCCC-----CCcCHHHHHHHHHHHhcchhCCCcCceEEECCC
Confidence             12222     68899999999999996443  3454 456554

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=1.2e-22  Score=165.68  Aligned_cols=226  Identities=16%  Similarity=0.104  Sum_probs=154.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|+++||||++.||+++++.|+++|++|++.+|+..    ..++....+........++..+.+|++|+++++++++  
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~----~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   78 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNED----RLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT   78 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHH
Confidence            5799999999999999999999999999999999761    0111122233322223478999999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC-------CCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 -----GCTGVLHVATPVDFE-------DKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                           .+|++||+||.....       ..+.++..+++|+.++..+.+++.+    .+ -..++++||.....+.     
T Consensus        79 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~-----  152 (274)
T d1xhla_          79 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAH-----  152 (274)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCC-----
T ss_pred             HHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccC-----
Confidence                 479999999864321       1122458899999998888777643    33 5678888876643222     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCC-ccH-HHHHHHHh-
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFA-GSV-RSSLALIL-  219 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~-~~~-~~~~~~~~-  219 (285)
                                       +....|+.+|...+.+.+.++.++   ||+++.|.||.|.+|....... ... ........ 
T Consensus       153 -----------------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~  215 (274)
T d1xhla_         153 -----------------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS  215 (274)
T ss_dssp             -----------------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred             -----------------CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHH
Confidence                             234579999999999998888774   8999999999998774222111 111 11111111 


Q ss_pred             -cCccccccccCcceeeHHHHHHHHHHhhcCC---CCCce-EEEecc
Q 023244          220 -GNREEYGFLLNTSMVHVDDVARAHIFLLEYP---DAKGR-YICSSH  261 (285)
Q Consensus       220 -~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~-~~~~~~  261 (285)
                       ....++.     .+..++|+|+++++++..+   -..|. +.+.|+
T Consensus       216 ~~~~iPlg-----R~g~pediA~~v~fL~S~d~s~~itG~~i~vDGG  257 (274)
T d1xhla_         216 RKECIPVG-----HCGKPEEIANIIVFLADRNLSSYIIGQSIVADGG  257 (274)
T ss_dssp             CTTTCTTS-----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHcCCCCC-----CCcCHHHHHHHHHHHcCCccccCccCcEEEeCcC
Confidence             1222333     6889999999999999522   23454 455554

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.3e-22  Score=167.10  Aligned_cols=224  Identities=13%  Similarity=0.105  Sum_probs=153.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-CC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-LP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||++.||++++++|+++|++|++.+|+..    ...+....+.. .. ..+.++..+.+|++|+++++++++
T Consensus        11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~----~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   86 (297)
T d1yxma1          11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLE----RLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVK   86 (297)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHH
Confidence            5799999999999999999999999999999999861    00111122221 11 124578999999999998888775


Q ss_pred             -------CCCEEEEecccCCC-----CCCChHHHHHHHHHHHHHHHHHHHHh----cCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDF-----EDKEPEEVITQRAINGTLGILKSCLK----SGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+|+....     ...+.++..+++|+.++..+.+++.+    .+ -..+|++||.... ..     
T Consensus        87 ~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss~~~~-~~-----  159 (297)
T d1yxma1          87 STLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPTKA-GF-----  159 (297)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCCTT-CC-----
T ss_pred             HHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccccccc-cc-----
Confidence                   47999999987543     12233458899999999888887643    33 4678888764321 11     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|.+.+.+.+.++.++   ||++++|.||.|.++................. ...
T Consensus       160 -----------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~-~~~  221 (297)
T d1yxma1         160 -----------------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGS-FQK  221 (297)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTG-GGG
T ss_pred             -----------------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHH-Hhc
Confidence                             234679999999999999998775   79999999999988743222111110000000 001


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .+     ...+..++|+|+++++++....  ..|. +.+.|+
T Consensus       222 ~p-----lgR~g~pedvA~~v~fL~Sd~s~~iTG~~i~VDGG  258 (297)
T d1yxma1         222 IP-----AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG  258 (297)
T ss_dssp             ST-----TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCCcCHHHHHHHHHHHhCchhcCcCCcEEEeCcC
Confidence            12     2368899999999999996433  2454 445443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-22  Score=166.57  Aligned_cols=226  Identities=16%  Similarity=0.149  Sum_probs=151.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC--
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG--   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--   82 (285)
                      +|.|||||||+.||+++++.|+++|.+|+.+.+...+. ....+...........+.++..+.+|++|.+++.++++.  
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~   80 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDL-KTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCG-GGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCCh-hhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhcc
Confidence            56789999999999999999999998876665432000 001111222333434456899999999999999988753  


Q ss_pred             ---CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCcccccC
Q 023244           83 ---CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDET  150 (285)
Q Consensus        83 ---~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~  150 (285)
                         +|+++|+|+.....     ..+.++..+++|+.++.++.+++    ++++ -+++|++||..+..+.          
T Consensus        81 ~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~----------  149 (285)
T d1jtva_          81 EGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGL----------  149 (285)
T ss_dssp             TSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCC----------
T ss_pred             ccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCC----------
Confidence               69999999875541     22334588999999888877764    4455 5799999998765333          


Q ss_pred             CCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccH-----------HHHHH
Q 023244          151 FWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSV-----------RSSLA  216 (285)
Q Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~-----------~~~~~  216 (285)
                                  +....|+.||++.+.+.+.++.+.   |++++++.||.|-++.........-           ..+..
T Consensus       150 ------------~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (285)
T d1jtva_         150 ------------PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQ  217 (285)
T ss_dssp             ------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHH
T ss_pred             ------------CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHH
Confidence                        344679999999999998888774   8999999999998775332211110           00111


Q ss_pred             HHhc-CccccccccCcceeeHHHHHHHHHHhhcCCCCCceEEEe
Q 023244          217 LILG-NREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGRYICS  259 (285)
Q Consensus       217 ~~~~-~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~~~~~  259 (285)
                      .... ....     ...+..++|+|++++++++.+.+.-.|..+
T Consensus       218 ~~~~~~~~~-----~~~~~~PeeVA~~v~~~~~~~~p~~ry~~g  256 (285)
T d1jtva_         218 YLAHSKQVF-----REAAQNPEEVAEVFLTALRAPKPTLRYFTT  256 (285)
T ss_dssp             HHHHHHHHH-----HHHCBCHHHHHHHHHHHHHCSSCCSEEESC
T ss_pred             HHHHHhhhh-----cccCCCHHHHHHHHHHHHhCCCCCeEEecH
Confidence            1000 0000     114678999999999999887665555544

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=7.6e-23  Score=166.80  Aligned_cols=226  Identities=17%  Similarity=0.131  Sum_probs=151.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++|++|||||++.||+++++.|+++|++|++.+|+.+    ..++....+.+......++..+.+|++|+++++++++  
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~----~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   79 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSE----RLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST   79 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHH----HHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHH
Confidence            5799999999999999999999999999999999861    0111122233322233578999999999998888775  


Q ss_pred             -----CCCEEEEecccCCCC------CCC---hHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEecc-ceeeeccCCC
Q 023244           82 -----GCTGVLHVATPVDFE------DKE---PEEVITQRAINGTLGILKSCLKS---GTVKRVVYTSS-NAAVFYNDKD  143 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~------~~~---~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~SS-~~~~~~~~~~  143 (285)
                           .+|++||+||.....      .+.   .++..+++|+.++..+.+++.+.   + -..+|+++| .+...+.   
T Consensus        80 ~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~-~g~iI~~~Ss~a~~~~~---  155 (272)
T d1xkqa_          80 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVAS-KGEIVNVSSIVAGPQAQ---  155 (272)
T ss_dssp             HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSSSCC---
T ss_pred             HHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhccccccc-CCccccccchhccccCC---
Confidence                 479999999975431      111   23578899999988888776432   2 245555555 4332222   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCc--cHHHHHHHH
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAG--SVRSSLALI  218 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~--~~~~~~~~~  218 (285)
                                         +....|+.||.+.+.+.+.++.++   ||+++.|.||.|-++........  .........
T Consensus       156 -------------------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~  216 (272)
T d1xkqa_         156 -------------------PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFM  216 (272)
T ss_dssp             -------------------CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHH
T ss_pred             -------------------CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHH
Confidence                               234679999999999998888774   89999999999987742211111  111111111


Q ss_pred             --hcCccccccccCcceeeHHHHHHHHHHhhcCC---CCCce-EEEecc
Q 023244          219 --LGNREEYGFLLNTSMVHVDDVARAHIFLLEYP---DAKGR-YICSSH  261 (285)
Q Consensus       219 --~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~---~~~~~-~~~~~~  261 (285)
                        .....++.     .+..++|+|+++.+++...   -..|. +.+.|+
T Consensus       217 ~~~~~~~Plg-----R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG  260 (272)
T d1xkqa_         217 ASHKECIPIG-----AAGKPEHIANIILFLADRNLSFYILGQSIVADGG  260 (272)
T ss_dssp             HHCTTTCTTS-----SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred             HHHhcCCCCC-----CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcC
Confidence              12222333     6889999999999999532   23454 445543

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.88  E-value=8.4e-22  Score=158.59  Aligned_cols=171  Identities=19%  Similarity=0.185  Sum_probs=125.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHH---HcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLL---DHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~---~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ||+|||||||+.||.+++++|+   ++|++|++.+|+.        ++...+.++.....++.++.+|++|.++++++++
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~   73 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNR--------EQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVA   73 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCT--------TSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHh
Confidence            5789999999999999999997   4689999999987        3333333222223589999999999988777654


Q ss_pred             ---------CCCEEEEecccCCCC------CCChHHHHHHHHHHHHHHHHHHHHh----c----------CCccEEEEec
Q 023244           82 ---------GCTGVLHVATPVDFE------DKEPEEVITQRAINGTLGILKSCLK----S----------GTVKRVVYTS  132 (285)
Q Consensus        82 ---------~~d~vih~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~----~----------~~~~~~v~~S  132 (285)
                               .+|++||+||.....      ..+..+..+++|+.++..+.+++..    .          ....++|++|
T Consensus        74 ~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~  153 (248)
T d1snya_          74 DIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  153 (248)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             hhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccccccccc
Confidence                     379999999975431      1122357899999998888776532    1          0146899999


Q ss_pred             cceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCC
Q 023244          133 SNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPF  202 (285)
Q Consensus       133 S~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~  202 (285)
                      |.........                   .+....|+.||.+...+.+.++.++   |++++.+.||.|-++.
T Consensus       154 S~~g~~~~~~-------------------~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m  207 (248)
T d1snya_         154 SILGSIQGNT-------------------DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDM  207 (248)
T ss_dssp             CGGGCSTTCC-------------------SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTT
T ss_pred             ccccccCCCC-------------------CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCc
Confidence            9764322110                   1234579999999998888887664   7999999999998874

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.88  E-value=1.7e-22  Score=162.87  Aligned_cols=213  Identities=10%  Similarity=0.009  Sum_probs=147.7

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-----
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-----   81 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   81 (285)
                      ++|||||++.||+.+++.|+++|++|++.+|+.        +....++..     ...+..+|++|.++++++++     
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~--------~~~~~~~~~-----~~~~~~~dv~~~~~~~~~~~~~~~~   68 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESF--------KQKDELEAF-----AETYPQLKPMSEQEPAELIEAVTSA   68 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGG--------GSHHHHHHH-----HHHCTTSEECCCCSHHHHHHHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHhh-----hCcEEEeccCCHHHHHHHHHHHHHH
Confidence            689999999999999999999999999999976        333333322     11234578888877776664     


Q ss_pred             --CCCEEEEecccCCC-C-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCCCCccccc
Q 023244           82 --GCTGVLHVATPVDF-E-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDKDVDMMDE  149 (285)
Q Consensus        82 --~~d~vih~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e  149 (285)
                        .+|++||+||.... .     ..+.++..+++|+.++..+.+++    ++++ -.++|++||.....+.         
T Consensus        69 ~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~---------  138 (252)
T d1zmta1          69 YGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPW---------  138 (252)
T ss_dssp             HSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCC---------
T ss_pred             cCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeeccccccccccc---------
Confidence              47999999986432 1     11223578899999888877765    4444 5799999998764332         


Q ss_pred             CCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc----HHHHHHHHhcCc
Q 023244          150 TFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS----VRSSLALILGNR  222 (285)
Q Consensus       150 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~----~~~~~~~~~~~~  222 (285)
                                   +....|+.||...+.+.+.++.++   ||++++|.||.+.++.........    ......... ..
T Consensus       139 -------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~-~~  204 (252)
T d1zmta1         139 -------------KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVK-KV  204 (252)
T ss_dssp             -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHH-HH
T ss_pred             -------------ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHH-hc
Confidence                         234579999999999998888774   799999999999887543322110    011111111 11


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCCC--Cce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPDA--KGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~--~~~-~~~~~~  261 (285)
                      .++.     .+..++|+|+++.+++.....  .|. +.+.|+
T Consensus       205 ~pl~-----R~g~pedvA~~v~fL~S~~s~~iTG~~i~vdGG  241 (252)
T d1zmta1         205 TALQ-----RLGTQKELGELVAFLASGSCDYLTGQVFWLAGG  241 (252)
T ss_dssp             SSSS-----SCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred             CCCC-----CCcCHHHHHHHHHHHhCchhcCCcCCeEEECCC
Confidence            2222     688999999999999976542  454 455554

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=3.9e-21  Score=154.71  Aligned_cols=211  Identities=17%  Similarity=0.149  Sum_probs=147.2

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      .++|++|||||++.||..++++|+++|++|++++|+..       +.....+++   ..+......|+.+.+..++... 
T Consensus         3 lkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~-------~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~   72 (248)
T d2o23a1           3 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNS-------GGEAQAKKL---GNNCVFAPADVTSEKDVQTALAL   72 (248)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS-------SHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH-------HHHHHHHHh---CCCcccccccccccccccccccc
Confidence            46899999999999999999999999999999999871       222223333   2377888999998876665543 


Q ss_pred             ------CCCEEEEecccCCC-----------CCCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEeccce
Q 023244           82 ------GCTGVLHVATPVDF-----------EDKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNA  135 (285)
Q Consensus        82 ------~~d~vih~a~~~~~-----------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~  135 (285)
                            ..|.++++++....           ...+.+...+++|+.++.++.+++.+.         ..-.++|++||..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~  152 (248)
T d2o23a1          73 AKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA  152 (248)
T ss_dssp             HHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH
T ss_pred             cccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchh
Confidence                  36888888765332           111234588999999999998887542         1135899999988


Q ss_pred             eeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHH
Q 023244          136 AVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVR  212 (285)
Q Consensus       136 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~  212 (285)
                      +..+.                      +....|+.||...+.+.+.++.++   ||++++|.||.+.++.......... 
T Consensus       153 ~~~~~----------------------~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~-  209 (248)
T d2o23a1         153 AFEGQ----------------------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVC-  209 (248)
T ss_dssp             HHHCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------
T ss_pred             hccCC----------------------CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHH-
Confidence            65333                      345679999999999999998874   7999999999998875332211111 


Q ss_pred             HHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCc
Q 023244          213 SSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKG  254 (285)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~  254 (285)
                         ...... .++    ...+..++|+|+++.++++++-..|
T Consensus       210 ---~~~~~~-~pl----~~R~g~peevA~~v~fL~s~~~itG  243 (248)
T d2o23a1         210 ---NFLASQ-VPF----PSRLGDPAEYAHLVQAIIENPFLNG  243 (248)
T ss_dssp             ---CHHHHT-CSS----SCSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred             ---HHHHhc-CCC----CCCCcCHHHHHHHHHHHHhCCCCCc
Confidence               111111 111    1257899999999999997543344

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.87  E-value=1.5e-21  Score=158.23  Aligned_cols=225  Identities=18%  Similarity=0.146  Sum_probs=156.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      +.++||||||+|.||.+++++|+++|+ +|+++.|+.+    ..+.......++...+.++.++.+|++|.+++.++++.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~----~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~   83 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGP----DADGAGELVAELEALGARTTVAACDVTDRESVRELLGG   83 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGG----GSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCcc----CHHHHHHHHHHHHhccccccccccccchHHHHHHhhcc
Confidence            457999999999999999999999998 5777888641    11112222222222345899999999999999988763


Q ss_pred             ------CCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccCCCCcccccCC
Q 023244           83 ------CTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYNDKDVDMMDETF  151 (285)
Q Consensus        83 ------~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~  151 (285)
                            +|.|+|+++.....     ..+.....++.|+.++.++.+++...+ .+++|++||..+..+.           
T Consensus        84 i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~-~~~iv~~SS~a~~~g~-----------  151 (259)
T d2fr1a1          84 IGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAFGA-----------  151 (259)
T ss_dssp             SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHTCC-----------
T ss_pred             ccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccC-CceEeeecchhhccCC-----------
Confidence                  58999999986651     122235778899999999999888776 7899999999876444           


Q ss_pred             CCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHcCCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCc
Q 023244          152 WSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEHGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNT  231 (285)
Q Consensus       152 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
                                 +....|+.+|...+.+.+++. ..|++++.|.||.+.+++....   ..   ...+..        ...
T Consensus       152 -----------~~~~~YaAaka~l~~la~~~~-~~Gi~v~~I~pg~~~~~g~~~~---~~---~~~~~~--------~G~  205 (259)
T d2fr1a1         152 -----------PGLGGYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAEG---PV---ADRFRR--------HGV  205 (259)
T ss_dssp             -----------TTCTTTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC------------------CTT--------TTE
T ss_pred             -----------cccHHHHHHHHhHHHHHHHHH-hCCCCEEECCCCcccCCccccc---hH---HHHHHh--------cCC
Confidence                       234569999999999988876 4699999999999987654221   00   011111        112


Q ss_pred             ceeeHHHHHHHHHHhhcCCCCCceEEEeccccCHHHHHHHHHh
Q 023244          232 SMVHVDDVARAHIFLLEYPDAKGRYICSSHTLTIQEMAEFLSA  274 (285)
Q Consensus       232 ~~i~~~D~a~~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~  274 (285)
                      ..+..+++++++..++..+.......    .+.|..+......
T Consensus       206 ~~~~~~~~~~~l~~~l~~~~~~~~v~----~~d~~~~~~~~~~  244 (259)
T d2fr1a1         206 IEMPPETACRALQNALDRAEVCPIVI----DVRWDRFLLAYTA  244 (259)
T ss_dssp             ECBCHHHHHHHHHHHHHTTCSSCEEC----EECHHHHHHHHTS
T ss_pred             CCCCHHHHHHHHHHHHhCCCceEEEE----eCcHHHHHHhhhc
Confidence            46789999999999998765544321    2345555444433

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=9.3e-22  Score=162.18  Aligned_cols=203  Identities=14%  Similarity=0.089  Sum_probs=142.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCcccc-Cccchhh-hhcCCCCCCCEEEEecCCCChhhHHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR-NSKDLSF-LKNLPGASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      |..++|++|||||++.||+.++++|+++|++|++.+|+....... ..+.... ..+..   .....+..|++|.++.++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR---RRGGKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH---HTTCEEEEECCCGGGHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh---hcccccccccchHHHHHH
Confidence            555689999999999999999999999999999998865211111 1111111 11111   123455678888877666


Q ss_pred             Hhc-------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHH----HhcCCccEEEEeccceeeeccCC
Q 023244           79 AIA-------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSC----LKSGTVKRVVYTSSNAAVFYNDK  142 (285)
Q Consensus        79 ~~~-------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~SS~~~~~~~~~  142 (285)
                      +++       .+|++||+||.....     ..+.++..+++|+.++..+.+++    ++++ -++||++||..+..+.  
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~--  156 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGN--  156 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCC--
T ss_pred             HHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCC--
Confidence            654       479999999986541     22233588999999988887775    4445 5799999998865443  


Q ss_pred             CCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHh
Q 023244          143 DVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALIL  219 (285)
Q Consensus       143 ~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~  219 (285)
                                          +....|+.||...+.+.+.++.+.   ||++++|.||.+-.+.... .+.          
T Consensus       157 --------------------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~-~~~----------  205 (302)
T d1gz6a_         157 --------------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETV-MPE----------  205 (302)
T ss_dssp             --------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGG-SCH----------
T ss_pred             --------------------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhc-CcH----------
Confidence                                334679999999999999988774   8999999999874332111 110          


Q ss_pred             cCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          220 GNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       220 ~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                          .     ...++.++|+|.++++++..
T Consensus       206 ----~-----~~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         206 ----D-----LVEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             ----H-----HHHHSCGGGTHHHHHHHTST
T ss_pred             ----h-----hHhcCCHHHHHHHHHHHcCC
Confidence                0     11356689999999999853

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=99.87  E-value=6.7e-21  Score=157.19  Aligned_cols=221  Identities=15%  Similarity=0.118  Sum_probs=147.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||||.||++++++|+++|++|++++|+.        ++... ..++. ..+.++..+.+|+++.++++.+++
T Consensus        24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~--------~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~   95 (294)
T d1w6ua_          24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM--------DVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS   95 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH--------HHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhh
Confidence            569999999999999999999999999999999986        22211 11111 123478899999999998877664


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             .+|++||+|+.....     ........+.+|......+...+.    ..+....++.+||.......     
T Consensus        96 ~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~-----  170 (294)
T d1w6ua_          96 ELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGS-----  170 (294)
T ss_dssp             HHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCC-----
T ss_pred             hhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcc-----
Confidence                   479999999975542     112234667778777666655432    22324567777776543222     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNR  222 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~  222 (285)
                                       +....|+.+|.+.+.+.+.++.++   ||++++|.||.|.++.........-.. ...... .
T Consensus       171 -----------------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~-~~~~~~-~  231 (294)
T d1w6ua_         171 -----------------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF-EKEMIG-R  231 (294)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHH-HHHHHT-T
T ss_pred             -----------------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHH-HHHHhh-c
Confidence                             234579999999999999988774   799999999999887543322111111 111111 1


Q ss_pred             cccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          223 EEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       223 ~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      .+..     .+..++|+|+++.+++....  -.|. ..+.|+
T Consensus       232 ~pl~-----R~~~pediA~~v~fL~sd~s~~itG~~i~vDGG  268 (294)
T d1w6ua_         232 IPCG-----RLGTVEELANLAAFLCSDYASWINGAVIKFDGG  268 (294)
T ss_dssp             CTTS-----SCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CCCC-----CCCCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence            2222     68899999999999996543  3454 445544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.86  E-value=2.3e-20  Score=150.24  Aligned_cols=209  Identities=15%  Similarity=0.169  Sum_probs=138.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      +|+|||||||+.||.+++++|+++|+  .|++..|+.        ++...+.+.  ...++.++.+|++|.++++++++ 
T Consensus         3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~--------~~~~~l~~~--~~~~~~~~~~Dvs~~~~v~~~~~~   72 (250)
T d1yo6a1           3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDV--------EKATELKSI--KDSRVHVLPLTVTCDKSLDTFVSK   72 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSG--------GGCHHHHTC--CCTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCH--------HHHHHHHHh--hCCceEEEEEecCCHHHHHHHHHH
Confidence            58999999999999999999999995  688888877        444444443  23579999999999988777653 


Q ss_pred             --------CCCEEEEecccCCC----CC--CChHHHHHHHHHHHHHHHHHHHH----hcC----------CccEEEEecc
Q 023244           82 --------GCTGVLHVATPVDF----ED--KEPEEVITQRAINGTLGILKSCL----KSG----------TVKRVVYTSS  133 (285)
Q Consensus        82 --------~~d~vih~a~~~~~----~~--~~~~~~~~~~n~~~~~~l~~~~~----~~~----------~~~~~v~~SS  133 (285)
                              .+|++||+||....    ..  .+..+..+++|+.++..+.+++.    +.+          ...+++.+|+
T Consensus        73 i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~  152 (250)
T d1yo6a1          73 VGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISS  152 (250)
T ss_dssp             HHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECC
T ss_pred             HHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccc
Confidence                    27999999997432    11  12235789999999988877753    211          1246777776


Q ss_pred             ceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCcc
Q 023244          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGS  210 (285)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~  210 (285)
                      ...........     ..          ..+...|+.||++...+.+.++.++   |++++++.||.|-++....     
T Consensus       153 ~~~~~~~~~~~-----~~----------~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~-----  212 (250)
T d1yo6a1         153 GLGSITDNTSG-----SA----------QFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----  212 (250)
T ss_dssp             GGGCSTTCCST-----TS----------SSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------
T ss_pred             ccccccCCccc-----cc----------chhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCC-----
Confidence            65332221100     00          1233569999999999999888774   7999999999997653110     


Q ss_pred             HHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecccc
Q 023244          211 VRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSHTL  263 (285)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~~~  263 (285)
                                 .         ..+.+++.+..++..+....  ..|.| +..+.++
T Consensus       213 -----------~---------~~~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~  248 (250)
T d1yo6a1         213 -----------N---------AALTVEQSTAELISSFNKLDNSHNGRFFMRNLKPY  248 (250)
T ss_dssp             --------------------------HHHHHHHHHHHTTCCGGGTTCEEETTEEEC
T ss_pred             -----------C---------CCCCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeC
Confidence                       0         23567888998888887543  34554 4333443

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=4.9e-22  Score=161.00  Aligned_cols=207  Identities=17%  Similarity=0.101  Sum_probs=147.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH---cCCeEEEEecCCCCccccCccchhhhh-cC--CCCCCCEEEEecCCCChhhHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSELDPEHRNSKDLSFLK-NL--PGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      .+|.++|||||+.||..++++|++   +|++|++++|+.        +....+. ++  ...+.++.++.+|++|+++++
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~--------~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~   76 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSE--------SMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ   76 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCH--------HHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCH--------HHHHHHHHHHHhhcCCceEEEEEccCCCHHHHH
Confidence            468999999999999999999985   699999999986        3332221 11  112347889999999999888


Q ss_pred             HHhc-----------CCCEEEEecccCCC------CC--CChHHHHHHHHHHHHHHHHHHHHhc----C-CccEEEEecc
Q 023244           78 AAIA-----------GCTGVLHVATPVDF------ED--KEPEEVITQRAINGTLGILKSCLKS----G-TVKRVVYTSS  133 (285)
Q Consensus        78 ~~~~-----------~~d~vih~a~~~~~------~~--~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~SS  133 (285)
                      ++++           ..|++||+||....      ..  .+.++..+++|+.++..+.+++.+.    + ...++|++||
T Consensus        77 ~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS  156 (259)
T d1oaaa_          77 RLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS  156 (259)
T ss_dssp             HHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC
T ss_pred             HHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc
Confidence            8763           24799999986432      11  1223578999999999999887653    1 2358999999


Q ss_pred             ceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-CCcEEEeccCceecCCCCCC-----C
Q 023244          134 NAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-GLDLVTLIPSMVVGPFICPK-----F  207 (285)
Q Consensus       134 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-~i~~~i~Rp~~v~g~~~~~~-----~  207 (285)
                      ..+..+.                      +....|+.||...+.+.+.++.+. |++++.|.||.|.++.....     .
T Consensus       157 ~~~~~~~----------------------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~  214 (259)
T d1oaaa_         157 LCALQPY----------------------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKD  214 (259)
T ss_dssp             GGGTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSC
T ss_pred             ccccCCC----------------------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCC
Confidence            8764332                      335679999999999999998774 89999999999987631100     0


Q ss_pred             CccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          208 AGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      +.....+....     +     ...+..++|+|+++++++.+.
T Consensus       215 ~~~~~~~~~~~-----~-----~~r~~~p~evA~~i~~ll~~~  247 (259)
T d1oaaa_         215 PELRSKLQKLK-----S-----DGALVDCGTSAQKLLGLLQKD  247 (259)
T ss_dssp             HHHHHHHHHHH-----H-----TTCSBCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhcC-----C-----CCCCCCHHHHHHHHHHHhhhc
Confidence            00111111111     1     125688999999999998643

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=1.4e-20  Score=150.20  Aligned_cols=190  Identities=14%  Similarity=0.113  Sum_probs=136.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh----
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI----   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----   80 (285)
                      +|+||||||+|.||+++++.|+++|++|++++++..        .         .......+..|..+.++.+.+.    
T Consensus         2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (236)
T d1dhra_           2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN--------E---------EASASVIVKMTDSFTEQADQVTAEVG   64 (236)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC--------T---------TSSEEEECCCCSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcc--------c---------cccccceeecccCcHHHHHHHHHHHH
Confidence            689999999999999999999999999999998761        0         0113334456665554443332    


Q ss_pred             ---c--CCCEEEEecccCCC---CCC---ChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc
Q 023244           81 ---A--GCTGVLHVATPVDF---EDK---EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        81 ---~--~~d~vih~a~~~~~---~~~---~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                         .  .+|++||+||....   ..+   +..+..+++|+.++.++.+++.+. ++-.++|++||..+..+.        
T Consensus        65 ~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~--------  136 (236)
T d1dhra_          65 KLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT--------  136 (236)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------
T ss_pred             HHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc--------
Confidence               2  37999999985332   111   223467899999999988887653 224789999998764332        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                    +....|+.||.+.+.+.+.++.+.     |++++.+.||.+.+|...           .. . ...
T Consensus       137 --------------~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~-----------~~-~-~~~  189 (236)
T d1dhra_         137 --------------PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNR-----------KS-M-PEA  189 (236)
T ss_dssp             --------------TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHH-----------HH-S-TTS
T ss_pred             --------------cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcch-----------hh-C-ccc
Confidence                          234679999999999999998663     699999999999876311           11 1 111


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .+.     .|+.++|+|+.+.+++....
T Consensus       190 ~~~-----~~~~pe~va~~~~~l~s~~~  212 (236)
T d1dhra_         190 DFS-----SWTPLEFLVETFHDWITGNK  212 (236)
T ss_dssp             CGG-----GSEEHHHHHHHHHHHHTTTT
T ss_pred             hhh-----cCCCHHHHHHHHHHHhCCCc
Confidence            122     58899999999999997543

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.5e-20  Score=152.28  Aligned_cols=220  Identities=15%  Similarity=0.092  Sum_probs=150.3

Q ss_pred             CCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+|  .||+++++.|+++|++|++.+|+.        +......+......+...+..|+.+..+....++
T Consensus         4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (258)
T d1qsga_           4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND--------KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA   75 (258)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST--------TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCH--------HHHHHHHHHHhhcCCcceeecccchHHHHHHHHH
Confidence            479999999999  799999999999999999999986        2222222222223356778889999877666654


Q ss_pred             -------CCCEEEEecccCCCC----------CCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCC
Q 023244           82 -------GCTGVLHVATPVDFE----------DKEPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKD  143 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~  143 (285)
                             ..|++||+|+.....          ..+.....+..|+.+...+.+++... .+-+.+|++||.....+.   
T Consensus        76 ~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~---  152 (258)
T d1qsga_          76 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAI---  152 (258)
T ss_dssp             HHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBC---
T ss_pred             HhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCC---
Confidence                   369999999874431          11223456677788888888877654 123568888887653222   


Q ss_pred             CcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          144 VDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       144 ~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                         +....|+.||.+.+.+.+.+++++   ||++++|+||.|.++....... . .........
T Consensus       153 -------------------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~-~~~~~~~~~  211 (258)
T d1qsga_         153 -------------------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD-F-RKMLAHCEA  211 (258)
T ss_dssp             -------------------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT-H-HHHHHHHHH
T ss_pred             -------------------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccch-h-hhHHHHHHh
Confidence                               234679999999999999998885   6999999999999875433211 1 111111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSH  261 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  261 (285)
                       ..++.     .+..++|+|.++.+++.+..  -.|.. .++++
T Consensus       212 -~~pl~-----R~~~peeia~~v~fL~s~~s~~itG~~i~vDGG  249 (258)
T d1qsga_         212 -VTPIR-----RTVTIEDVGNSAAFLCSDLSAGISGEVVHVDGG  249 (258)
T ss_dssp             -HSTTS-----SCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             -CCCCC-----CCcCHHHHHHHHHHHhCchhcCccCceEEECcC
Confidence             12222     68899999999999996533  34554 45544

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.83  E-value=5.5e-20  Score=146.64  Aligned_cols=189  Identities=15%  Similarity=0.162  Sum_probs=132.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-----
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-----   79 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-----   79 (285)
                      .+|||||||+|.||++++++|+++|++|++++|+..        .      .   ......+.+|..+.+.....     
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~--------~------~---~~~~~~~~~~~~~~~~~~~~~~~~~   64 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN--------D------Q---ADSNILVDGNKNWTEQEQSILEQTA   64 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCC--------T------T---SSEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCch--------h------c---ccccceeccccCchhHHHHHHHHHH
Confidence            357999999999999999999999999999999871        0      0   11333445666655432222     


Q ss_pred             --hc--CCCEEEEecccCCC---CCC---ChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCcccc
Q 023244           80 --IA--GCTGVLHVATPVDF---EDK---EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVDMMD  148 (285)
Q Consensus        80 --~~--~~d~vih~a~~~~~---~~~---~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~~~~  148 (285)
                        ++  .+|++||+||....   ...   +.++..+++|+.++..+.+++.+. .+-.++|++||.....+.        
T Consensus        65 ~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~--------  136 (235)
T d1ooea_          65 SSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT--------  136 (235)
T ss_dssp             HHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC--------
T ss_pred             HHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc--------
Confidence              21  37999999996432   111   223467899999998888887654 113689999998765433        


Q ss_pred             cCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc-----CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          149 ETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH-----GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       149 e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~-----~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                                    +....|+.||++.+.+.+.++.++     +++++.+.||.+..+..           ... ... .
T Consensus       137 --------------~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~-----------~~~-~~~-~  189 (235)
T d1ooea_         137 --------------PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMN-----------RKW-MPN-A  189 (235)
T ss_dssp             --------------TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHH-----------HHH-STT-C
T ss_pred             --------------ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcch-----------hhh-CcC-C
Confidence                          334679999999999999998663     67889999999866521           111 111 1


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCC
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYP  250 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~  250 (285)
                      ..     ..|+.++|+++.++.++..+
T Consensus       190 ~~-----~~~~~~~~va~~~~~~l~~~  211 (235)
T d1ooea_         190 DH-----SSWTPLSFISEHLLKWTTET  211 (235)
T ss_dssp             CG-----GGCBCHHHHHHHHHHHHHCG
T ss_pred             cc-----ccCCCHHHHHHHHHHHhcCc
Confidence            11     25789999999988766543

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.9e-20  Score=151.77  Aligned_cols=211  Identities=18%  Similarity=0.086  Sum_probs=139.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCCCCccccCccchh-hhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSELDPEHRNSKDLS-FLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      +.+|||||++.||.+++++|+++ |++|++.+|+.        ++.+ ..+++...+.++.++.+|++|.++++++++  
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~--------~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~   75 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--------TRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFL   75 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSH--------HHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCH--------HHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHH
Confidence            44599999999999999999986 89999999987        2222 222222234578899999999998887765  


Q ss_pred             -----CCCEEEEecccCCCC--CC---ChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeccceeeeccCCCCc-----
Q 023244           82 -----GCTGVLHVATPVDFE--DK---EPEEVITQRAINGTLGILKSCLKS-GTVKRVVYTSSNAAVFYNDKDVD-----  145 (285)
Q Consensus        82 -----~~d~vih~a~~~~~~--~~---~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~SS~~~~~~~~~~~~-----  145 (285)
                           .+|++||+||.....  .+   +..+..+++|+.++..+.+++... .+-.++|++||............     
T Consensus        76 ~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k  155 (275)
T d1wmaa1          76 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQK  155 (275)
T ss_dssp             HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHH
T ss_pred             HHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhh
Confidence                 479999999986541  11   123468999999999999988653 11358999999865433211100     


Q ss_pred             ----ccccCCCCch----------hhhhhcCCCCchhHhhHHHHHHHHHHHHHH-------cCCcEEEeccCceecCCCC
Q 023244          146 ----MMDETFWSDV----------DYIRKLDSWGKSYAISKTLTERAALEFAEE-------HGLDLVTLIPSMVVGPFIC  204 (285)
Q Consensus       146 ----~~~e~~~~~~----------~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-------~~i~~~i~Rp~~v~g~~~~  204 (285)
                          ...+......          ........+...|+.||.....+.+.++++       .|++++.+.||.|.++...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~  235 (275)
T d1wmaa1         156 FRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG  235 (275)
T ss_dssp             HHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTC
T ss_pred             hcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCccc
Confidence                0000000000          000001123457999999887776655544       2899999999999876421


Q ss_pred             CCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcC
Q 023244          205 PKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEY  249 (285)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~  249 (285)
                      ..                         ....++|.|+.+++++..
T Consensus       236 ~~-------------------------~~~~pee~A~~~~~~a~~  255 (275)
T d1wmaa1         236 PK-------------------------ATKSPEEGAETPVYLALL  255 (275)
T ss_dssp             TT-------------------------CSBCHHHHTHHHHHHHSC
T ss_pred             Cc-------------------------ccCCHHHHHHHHHHHHcC
Confidence            11                         234678999999888743

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=2.1e-19  Score=143.85  Aligned_cols=207  Identities=21%  Similarity=0.168  Sum_probs=143.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc---
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA---   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---   81 (285)
                      .|++||||||+.||++++++|+++|++|++++|+.+                   ..+.....+|+++......+..   
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------------------~~~~~~~~~d~~~~~~~~~~~~~~~   61 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-------------------GEDLIYVEGDVTREEDVRRAVARAQ   61 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-------------------SSSSEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcc-------------------cccceEeeccccchhhhHHHHHhhh
Confidence            379999999999999999999999999999999871                   1245677899998876666543   


Q ss_pred             ---CCCEEEEecccCCC---------CCCChHHHHHHHHHHHHHHHHHHHHhc---------CCccEEEEeccceeeecc
Q 023244           82 ---GCTGVLHVATPVDF---------EDKEPEEVITQRAINGTLGILKSCLKS---------GTVKRVVYTSSNAAVFYN  140 (285)
Q Consensus        82 ---~~d~vih~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~SS~~~~~~~  140 (285)
                         ..+.+++.++....         ...+..+..++.|+.+...+.+.+...         +.-.++|++||..+..+.
T Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  141 (241)
T d1uaya_          62 EEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQ  141 (241)
T ss_dssp             HHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCC
T ss_pred             ccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCC
Confidence               23555555543221         112233577889988888777765322         114689999998765433


Q ss_pred             CCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHH
Q 023244          141 DKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLAL  217 (285)
Q Consensus       141 ~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~  217 (285)
                                            +....|+.+|.+.+.+.+.++.++   ||++++|.||.+.++......    ......
T Consensus       142 ----------------------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~----~~~~~~  195 (241)
T d1uaya_         142 ----------------------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----EKAKAS  195 (241)
T ss_dssp             ----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----HHHHHH
T ss_pred             ----------------------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh----hhHHHH
Confidence                                  345679999999999999998774   799999999999876432211    111112


Q ss_pred             HhcCccccccccCcceeeHHHHHHHHHHhhcCCCCCce-EEEecc
Q 023244          218 ILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPDAKGR-YICSSH  261 (285)
Q Consensus       218 ~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~~~~~-~~~~~~  261 (285)
                      .....+...     .+..++|+|+++.+++...-..|. +.+.|+
T Consensus       196 ~~~~~~~~~-----R~g~pedvA~~v~fL~s~~~iTG~~i~VDGG  235 (241)
T d1uaya_         196 LAAQVPFPP-----RLGRPEEYAALVLHILENPMLNGEVVRLDGA  235 (241)
T ss_dssp             HHTTCCSSC-----SCCCHHHHHHHHHHHHHCTTCCSCEEEESTT
T ss_pred             HHhcCCCCC-----CCcCHHHHHHHHHHHHhCCCCCCCEEEECCc
Confidence            222221112     578999999999999986544565 445544

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=2.8e-19  Score=145.26  Aligned_cols=198  Identities=14%  Similarity=0.055  Sum_probs=141.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhh-cC-CCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLK-NL-PGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++||||||+.||.+++++|+++|++|++++|+.        +....+. +. ......+..+..|+++.+.....++
T Consensus        13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~--------~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~   84 (269)
T d1xu9a_          13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSK--------ETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA   84 (269)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHH
Confidence            579999999999999999999999999999999987        3332221 11 1123467888899998876666543


Q ss_pred             -------CCCEEEEecccCCCC-----CCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCc
Q 023244           82 -------GCTGVLHVATPVDFE-----DKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVD  145 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~  145 (285)
                             ..|+++|+|+.....     ..+.....+++|+.++..+.+.+.    +.+  +++|++||.++..+.     
T Consensus        85 ~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~--G~ii~isS~~~~~~~-----  157 (269)
T d1xu9a_          85 QAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSN--GSIVVVSSLAGKVAY-----  157 (269)
T ss_dssp             HHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEEEGGGTSCC-----
T ss_pred             HHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcC--CcceEeccchhcCCC-----
Confidence                   479999999875541     122235778999988877766654    333  699999998764333     


Q ss_pred             ccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH-----cCCcEEEeccCceecCCCCCCCCccHHHHHHHHhc
Q 023244          146 MMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE-----HGLDLVTLIPSMVVGPFICPKFAGSVRSSLALILG  220 (285)
Q Consensus       146 ~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-----~~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~  220 (285)
                                       +....|+.||++.+.+.+.++.+     .+++++.+.||.|-++.           ......+
T Consensus       158 -----------------p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~-----------~~~~~~~  209 (269)
T d1xu9a_         158 -----------------PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTET-----------AMKAVSG  209 (269)
T ss_dssp             -----------------TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHH-----------HHHHSCG
T ss_pred             -----------------CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcH-----------HHHhccC
Confidence                             33568999999999888888765     35899999999997652           0111111


Q ss_pred             CccccccccCcceeeHHHHHHHHHHhhcCCC
Q 023244          221 NREEYGFLLNTSMVHVDDVARAHIFLLEYPD  251 (285)
Q Consensus       221 ~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~  251 (285)
                      .  .     ....+..+++|+.++..+....
T Consensus       210 ~--~-----~~~~~~~e~~a~~i~~~~~~~~  233 (269)
T d1xu9a_         210 I--V-----HMQAAPKEECALEIIKGGALRQ  233 (269)
T ss_dssp             G--G-----GGGCBCHHHHHHHHHHHHHTTC
T ss_pred             C--c-----cccCCCHHHHHHHHHHHhhcCC
Confidence            1  1     1145778999999988776543

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.81  E-value=4.8e-19  Score=144.51  Aligned_cols=220  Identities=12%  Similarity=0.055  Sum_probs=139.2

Q ss_pred             CCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      ++|++|||||+|  .||.++++.|+++|++|++++|+.     ...+....+..   ......++..|+++.++..++++
T Consensus         4 ~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~-----~~~~~~~~l~~---~~~~~~~~~~d~~~~~~~~~~~~   75 (274)
T d2pd4a1           4 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE-----SLEKRVRPIAQ---ELNSPYVYELDVSKEEHFKSLYN   75 (274)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST-----TTHHHHHHHHH---HTTCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCH-----HHHHHHHHHHh---hCCceeEeeecccchhhHHHHHH
Confidence            579999999887  799999999999999999999986     22222222222   23356678999999988777764


Q ss_pred             -------CCCEEEEecccCCCC------CCChHHHHHHH---HHHHHHHHHHHHHhcCCccE-EEEeccceeeeccCCCC
Q 023244           82 -------GCTGVLHVATPVDFE------DKEPEEVITQR---AINGTLGILKSCLKSGTVKR-VVYTSSNAAVFYNDKDV  144 (285)
Q Consensus        82 -------~~d~vih~a~~~~~~------~~~~~~~~~~~---n~~~~~~l~~~~~~~~~~~~-~v~~SS~~~~~~~~~~~  144 (285)
                             .+|++||+++.....      ...........   +......+...+.+..+... ++.+|+......     
T Consensus        76 ~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-----  150 (274)
T d2pd4a1          76 SVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKY-----  150 (274)
T ss_dssp             HHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSB-----
T ss_pred             HHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccc-----
Confidence                   479999999975431      11111122222   22244444444444322334 444444432211     


Q ss_pred             cccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcC
Q 023244          145 DMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGN  221 (285)
Q Consensus       145 ~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~  221 (285)
                                       .+....|+.+|...+.+.+.++.++   |++++++.||.+..+........ -......... 
T Consensus       151 -----------------~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~-~~~~~~~~~~-  211 (274)
T d2pd4a1         151 -----------------MAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADF-RMILKWNEIN-  211 (274)
T ss_dssp             -----------------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTH-HHHHHHHHHH-
T ss_pred             -----------------cccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCch-HHHHHHHhhh-
Confidence                             1334679999999999998888774   79999999999988754332111 1111111111 


Q ss_pred             ccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          222 REEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       222 ~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       .+.     ..+..++|+|.++.+++....  .+|. +.+.++
T Consensus       212 -~p~-----~r~~~pedIA~~v~fL~S~~s~~itG~~i~vDGG  248 (274)
T d2pd4a1         212 -APL-----RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDAG  248 (274)
T ss_dssp             -STT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             -hhc-----cCCcCHHHHHHHHHHHhChhhCCCcCceEEECCC
Confidence             122     268999999999999997543  3454 455544

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=8.4e-18  Score=137.70  Aligned_cols=217  Identities=14%  Similarity=0.032  Sum_probs=138.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchh----hhhcC-CC--------------CCCCEEE
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLS----FLKNL-PG--------------ASERLRI   65 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~-~~--------------~~~~~~~   65 (285)
                      ++.+|||||++.||++++++|+++|++|++.+++..       +...    .+... +.              ....+..
T Consensus         2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~   74 (284)
T d1e7wa_           2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA-------AEANALSATLNARRPNSAITVQADLSNVATAPVSGAD   74 (284)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC---
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH-------HHHHHHHHHHHhhcCCceEEEEeeccccccccccccc
Confidence            468999999999999999999999999999888651       1111    11111 00              0112334


Q ss_pred             EecCCCChhhHHHHhc-------CCCEEEEecccCCCC------CCCh-------------HHHHHHHHHHHHHHHHHHH
Q 023244           66 FHADLSHPDGFDAAIA-------GCTGVLHVATPVDFE------DKEP-------------EEVITQRAINGTLGILKSC  119 (285)
Q Consensus        66 ~~~Dl~d~~~~~~~~~-------~~d~vih~a~~~~~~------~~~~-------------~~~~~~~n~~~~~~l~~~~  119 (285)
                      +.+|+++.++++++++       .+|++||+||.....      .+.+             ....+.+|+.+...+.+++
T Consensus        75 ~~~dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~  154 (284)
T d1e7wa_          75 GSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAF  154 (284)
T ss_dssp             -CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccCCCHHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccc
Confidence            4567888888887764       479999999975431      1111             1235788888988888875


Q ss_pred             Hh---------cCCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---C
Q 023244          120 LK---------SGTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---G  187 (285)
Q Consensus       120 ~~---------~~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~  187 (285)
                      .+         .+....+|+++|.....+.                      +....|+.+|...+.+.+.++.++   |
T Consensus       155 ~~~~~~~~~~~~~~~~~ii~~~s~~~~~~~----------------------~~~~~Y~asKaal~~lt~~lA~el~~~g  212 (284)
T d1e7wa_         155 AHRVAGTPAKHRGTNYSIINMVDAMTNQPL----------------------LGYTIYTMAKGALEGLTRSAALELAPLQ  212 (284)
T ss_dssp             HHHHHTSCGGGSCSCEEEEEECCTTTTSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             cchhhhhHHHhcCCCCcccccccccccCCc----------------------cceeeeccccccchhhhHHHHHHhCCcc
Confidence            43         1224578888877643222                      234679999999999999988774   8


Q ss_pred             CcEEEeccCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          188 LDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       188 i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      |++++|.||.+-...  .    .............+...     .+..++|+|+++++++....  ..|. +.+.|+
T Consensus       213 IrvN~I~PG~t~~~~--~----~~~~~~~~~~~~~pl~~-----R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG  278 (284)
T d1e7wa_         213 IRVNGVGPGLSVLVD--D----MPPAVWEGHRSKVPLYQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG  278 (284)
T ss_dssp             EEEEEEEESSBCCGG--G----SCHHHHHHHHTTCTTTT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ccccccccccccccc--c----CCHHHHHHHHhcCCCCC-----CCCCHHHHHHHHHHHhCchhcCccCCeEEECcC
Confidence            999999999742211  1    11122222222222212     57899999999999996543  3455 445543

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.76  E-value=1.1e-17  Score=135.82  Aligned_cols=222  Identities=12%  Similarity=0.002  Sum_probs=140.1

Q ss_pred             CCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|++|||||+|  .||.+++++|+++|++|++.+|+.+       +....+.+.  .+.+...+++|+++.++...+++
T Consensus         5 ~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~-------~~~~~~~~~--~~~~~~~~~~dv~~~~~~~~~~~   75 (268)
T d2h7ma1           5 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRL-------RLIQRITDR--LPAKAPLLELDVQNEEHLASLAG   75 (268)
T ss_dssp             TTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCH-------HHHHHHHTT--SSSCCCEEECCTTCHHHHHHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChH-------HHHHHHHHH--cCCceeeEeeecccccccccccc
Confidence            478999999654  6999999999999999999999771       222333332  23467788999999876655543


Q ss_pred             ----------CCCEEEEecccCCCC--------C--CChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceeeeccC
Q 023244           82 ----------GCTGVLHVATPVDFE--------D--KEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAVFYND  141 (285)
Q Consensus        82 ----------~~d~vih~a~~~~~~--------~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~~~~~  141 (285)
                                ..|+++|+++.....        .  .......+..|+.........+.........+.++|....... 
T Consensus        76 ~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~-  154 (268)
T d2h7ma1          76 RVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAM-  154 (268)
T ss_dssp             HHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCC-
T ss_pred             hhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccC-
Confidence                      259999999864320        0  1112245566666666666666554323344555444322221 


Q ss_pred             CCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCC----CCccH---
Q 023244          142 KDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPK----FAGSV---  211 (285)
Q Consensus       142 ~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~----~~~~~---  211 (285)
                                           +....|+.+|...+.+.+.++.++   ||+++.|.||.+-++.....    .....   
T Consensus       155 ---------------------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~  213 (268)
T d2h7ma1         155 ---------------------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQ  213 (268)
T ss_dssp             ---------------------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHH
T ss_pred             ---------------------cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccc
Confidence                                 334679999999999999888774   79999999999976531100    00000   


Q ss_pred             -HHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          212 -RSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       212 -~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                       ..+....... .++    .+.+..++|+|+++.+++....  ..|. +.+.++
T Consensus       214 ~~~~~~~~~~~-~pl----~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG  262 (268)
T d2h7ma1         214 IQLLEEGWDQR-API----GWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG  262 (268)
T ss_dssp             HHHHHHHHHHH-CTT----CCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred             hHHHHHHHHhc-CCC----CCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcC
Confidence             1111111111 111    2357889999999999996433  2455 456554

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.75  E-value=3.1e-17  Score=135.13  Aligned_cols=232  Identities=12%  Similarity=0.019  Sum_probs=135.8

Q ss_pred             CCCCCCeEEEecCCc--hhHHHHHHHHHHcCCeEEEEecCCCCccc-----cCccchhhhhcCCCCCC--CEEEEecCC-
Q 023244            1 MEEGKGRVCVTGGTG--FIASWLIMRLLDHGYSVTTTVRSELDPEH-----RNSKDLSFLKNLPGASE--RLRIFHADL-   70 (285)
Q Consensus         1 M~~~~k~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~Dl-   70 (285)
                      |..++|++|||||+|  .||..+++.|+++|++|++.+|++.....     ................+  ++..+..++ 
T Consensus         4 ~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (297)
T d1d7oa_           4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD   83 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence            445789999999987  89999999999999999999885300000     00000000000000001  122222222 


Q ss_pred             -----------------CChhhHHHHh-------cCCCEEEEecccCCC-------CCCChHHHHHHHHHHHHHHHHHHH
Q 023244           71 -----------------SHPDGFDAAI-------AGCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSC  119 (285)
Q Consensus        71 -----------------~d~~~~~~~~-------~~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~  119 (285)
                                       .+....++++       ..+|++||+||....       ...+.+...+++|+.+...+.+++
T Consensus        84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~  163 (297)
T d1d7oa_          84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF  163 (297)
T ss_dssp             SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence                             2222223332       257999999987432       112223588999999999999988


Q ss_pred             HhcC-CccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHH----HcCCcEEEec
Q 023244          120 LKSG-TVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAE----EHGLDLVTLI  194 (285)
Q Consensus       120 ~~~~-~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~~~i~~~i~R  194 (285)
                      .... .-+..+.+++.+.....                     .+....|..+|...+.+.+.++.    ++|++++.|.
T Consensus       164 ~~~~~~~g~~~~~~~~~~~~~~---------------------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~  222 (297)
T d1d7oa_         164 LPIMNPGGASISLTYIASERII---------------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS  222 (297)
T ss_dssp             GGGEEEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             HHHhhcCCcceeeeehhhcccc---------------------cccccceecccccccccccccchhccccceEEecccc
Confidence            7542 12345555655432222                     12335699999887777665544    3589999999


Q ss_pred             cCceecCCCCCCCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCceE-EEecc
Q 023244          195 PSMVVGPFICPKFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGRY-ICSSH  261 (285)
Q Consensus       195 p~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~~-~~~~~  261 (285)
                      ||.+.++.....  ........... ...++.     .+..++|+|.++.+++....  ..|.. .+.|+
T Consensus       223 PG~i~T~~~~~~--~~~~~~~~~~~-~~~Plg-----R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG  284 (297)
T d1d7oa_         223 AGPLGSRAAKAI--GFIDTMIEYSY-NNAPIQ-----KTLTADEVGNAAAFLVSPLASAITGATIYVDNG  284 (297)
T ss_dssp             ECCCBCCCSSCC--SHHHHHHHHHH-HHSSSC-----CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             cccccchhhhhc--cCCHHHHHHHH-hCCCCC-----CCCCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence            999988764332  11111111111 112232     68899999999999996433  34554 45544

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.73  E-value=2.5e-16  Score=127.56  Aligned_cols=216  Identities=16%  Similarity=0.138  Sum_probs=133.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhh-hhcCCC-CCCCEEEEecCCCCh----hhHHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSF-LKNLPG-ASERLRIFHADLSHP----DGFDAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~Dl~d~----~~~~~~   79 (285)
                      +.+|||||++.||..++++|+++|++|++++|+.+       +..+. .+++.. ..........|+.+.    +.+.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSE-------GAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDI   74 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH-------HHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCch-------HHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHH
Confidence            47899999999999999999999999999999861       11111 111111 133666777666543    333333


Q ss_pred             hc-------CCCEEEEecccCCCCCC----------------ChHHHHHHHHHHHHHHHHHHHHhc--------CCccEE
Q 023244           80 IA-------GCTGVLHVATPVDFEDK----------------EPEEVITQRAINGTLGILKSCLKS--------GTVKRV  128 (285)
Q Consensus        80 ~~-------~~d~vih~a~~~~~~~~----------------~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~  128 (285)
                      ++       .+|++||+||.......                ......+..|..+...........        .....+
T Consensus        75 ~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (266)
T d1mxha_          75 IDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSV  154 (266)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEE
T ss_pred             HHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccc
Confidence            32       48999999997543110                001234455555555544444332        112356


Q ss_pred             EEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCC
Q 023244          129 VYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICP  205 (285)
Q Consensus       129 v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~  205 (285)
                      +.+|+.......                      +....|+.||...+.+.+.++.++   ||+++.|.||.+..+....
T Consensus       155 ~~~~~~~~~~~~----------------------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~  212 (266)
T d1mxha_         155 VNLCDAMTDLPL----------------------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP  212 (266)
T ss_dssp             EEECCGGGGSCC----------------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC
T ss_pred             hhhhhccccccC----------------------cchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC
Confidence            666665532221                      345689999999999998888774   7999999999987663211


Q ss_pred             CCCccHHHHHHHHhcCccccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          206 KFAGSVRSSLALILGNREEYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                            .......... .++.    +.+..++|+|+++++++.+..  ..|. +.+.|+
T Consensus       213 ------~~~~~~~~~~-~pl~----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG  260 (266)
T d1mxha_         213 ------QETQEEYRRK-VPLG----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG  260 (266)
T ss_dssp             ------HHHHHHHHTT-CTTT----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred             ------HHHHHHHHhc-CCCC----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECcc
Confidence                  1111222222 1221    245789999999999997543  3564 455554

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.71  E-value=3e-17  Score=132.34  Aligned_cols=223  Identities=17%  Similarity=0.110  Sum_probs=127.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh----
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI----   80 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----   80 (285)
                      ||.||||||++.||++++++|+++|++|++++|+..                     .   ...|+.+.+......    
T Consensus         1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~---------------------~---~~~d~~~~~~~~~~~~~~~   56 (257)
T d1fjha_           1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---------------------E---VIADLSTAEGRKQAIADVL   56 (257)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS---------------------S---EECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH---------------------H---HHHHhcCHHHHHHHHHHHH
Confidence            578999999999999999999999999999998761                     1   135777665544432    


Q ss_pred             ----cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHH----hcCCccEEEEeccceeeeccCCCCccc-ccCC
Q 023244           81 ----AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCL----KSGTVKRVVYTSSNAAVFYNDKDVDMM-DETF  151 (285)
Q Consensus        81 ----~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~SS~~~~~~~~~~~~~~-~e~~  151 (285)
                          ...|+++|+|+.....  .........|..+...+.+...    +.. ......+++.............. ....
T Consensus        57 ~~~~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  133 (257)
T d1fjha_          57 AKCSKGMDGLVLCAGLGPQT--KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEA  133 (257)
T ss_dssp             TTCTTCCSEEEECCCCCTTC--SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred             HHhCCCCcEEEEcCCCCCcH--HHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccC
Confidence                1379999999875542  2234667788777766665543    333 44555555543221110000000 0000


Q ss_pred             C--Cch-hhhhhc--CCCCchhHhhHHHHHHHHHHHHHHc---CCcEEEeccCceecCCCCCCCCccHHHHHHHHhcCcc
Q 023244          152 W--SDV-DYIRKL--DSWGKSYAISKTLTERAALEFAEEH---GLDLVTLIPSMVVGPFICPKFAGSVRSSLALILGNRE  223 (285)
Q Consensus       152 ~--~~~-~~~~~~--~~~~~~Y~~sK~~~E~~~~~~~~~~---~i~~~i~Rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~  223 (285)
                      .  ... ......  .++...|+.||.+.+.+.+.++.++   ||+++.|.||.+-+|.........  ...........
T Consensus       134 g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~--~~~~~~~~~~~  211 (257)
T d1fjha_         134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDP--RYGESIAKFVP  211 (257)
T ss_dssp             TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCC
T ss_pred             CcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCH--HHHHHHHhcCC
Confidence            0  000 000000  0112369999999999998888664   799999999999887532211100  00111111112


Q ss_pred             ccccccCcceeeHHHHHHHHHHhhcCCC--CCce-EEEecc
Q 023244          224 EYGFLLNTSMVHVDDVARAHIFLLEYPD--AKGR-YICSSH  261 (285)
Q Consensus       224 ~~~~~~~~~~i~~~D~a~~~~~~~~~~~--~~~~-~~~~~~  261 (285)
                      +.     ..+..++|+|+++.+++....  ..|. +.++|+
T Consensus       212 Pl-----gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG  247 (257)
T d1fjha_         212 PM-----GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG  247 (257)
T ss_dssp             ST-----TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred             CC-----CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence            22     268899999999999996443  3465 445544

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.70  E-value=5.1e-16  Score=129.38  Aligned_cols=175  Identities=8%  Similarity=0.009  Sum_probs=111.9

Q ss_pred             CCeEEEec--CCchhHHHHHHHHHHcCCeEEEEecCCCCcccc----Cccchhhhh-cCCCCCCCEEEEe----------
Q 023244            5 KGRVCVTG--GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHR----NSKDLSFLK-NLPGASERLRIFH----------   67 (285)
Q Consensus         5 ~k~ilVtG--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~----------   67 (285)
                      +|.+||||  ++..||+.+++.|+++|.+|++.++........    ..+...... .............          
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND   81 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGG
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcc
Confidence            57899999  557999999999999999999988754100000    000000000 0000001112222          


Q ss_pred             ----------cCCCChhhHHHHhc-------CCCEEEEecccCCC-------CCCChHHHHHHHHHHHHHHHHHHHHhc-
Q 023244           68 ----------ADLSHPDGFDAAIA-------GCTGVLHVATPVDF-------EDKEPEEVITQRAINGTLGILKSCLKS-  122 (285)
Q Consensus        68 ----------~Dl~d~~~~~~~~~-------~~d~vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~~-  122 (285)
                                .|+.+.+.++.+++       ++|++||+||....       ...+.+...+++|+.+...+.+++.+. 
T Consensus        82 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m  161 (329)
T d1uh5a_          82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM  161 (329)
T ss_dssp             CCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred             cchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhc
Confidence                      25555555555443       57999999986432       112234578899999998888888764 


Q ss_pred             CCccEEEEeccceeeeccCCCCcccccCCCCchhhhhhcCCCCchhHhhHHHHHHHHHHHHHH----cCCcEEEeccCce
Q 023244          123 GTVKRVVYTSSNAAVFYNDKDVDMMDETFWSDVDYIRKLDSWGKSYAISKTLTERAALEFAEE----HGLDLVTLIPSMV  198 (285)
Q Consensus       123 ~~~~~~v~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~----~~i~~~i~Rp~~v  198 (285)
                      ..-+++|.+||.......                     +.+...|+.+|...+.+.+.++.+    +||+++.|.||.|
T Consensus       162 ~~~GsIv~iss~~~~~~~---------------------p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i  220 (329)
T d1uh5a_         162 KPQSSIISLTYHASQKVV---------------------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPL  220 (329)
T ss_dssp             EEEEEEEEEECGGGTSCC---------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC
T ss_pred             ccccccccceeehhcccc---------------------cccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcc
Confidence            223689999987653222                     012346999999988888777754    4899999999998


Q ss_pred             ec
Q 023244          199 VG  200 (285)
Q Consensus       199 ~g  200 (285)
                      -+
T Consensus       221 ~T  222 (329)
T d1uh5a_         221 KS  222 (329)
T ss_dssp             CC
T ss_pred             cc
Confidence            65

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.34  E-value=2.1e-13  Score=104.37  Aligned_cols=83  Identities=14%  Similarity=0.077  Sum_probs=66.1

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      .++|+|+||||+|.||+.+++.|+++|++|++++|+.        ++...+.+......++....+|++|.+++++.+.+
T Consensus        21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~   92 (191)
T d1luaa1          21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL--------DKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG   92 (191)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccch--------HHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcC
Confidence            3679999999999999999999999999999999987        33222221101112455678999999999999999


Q ss_pred             CCEEEEecccC
Q 023244           83 CTGVLHVATPV   93 (285)
Q Consensus        83 ~d~vih~a~~~   93 (285)
                      +|+|||+|+..
T Consensus        93 iDilin~Ag~g  103 (191)
T d1luaa1          93 AHFVFTAGAIG  103 (191)
T ss_dssp             CSEEEECCCTT
T ss_pred             cCeeeecCccc
Confidence            99999999864

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.76  E-value=5.1e-08  Score=69.85  Aligned_cols=114  Identities=15%  Similarity=0.125  Sum_probs=77.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||.|+||+|.+|+.++..|..+|.  ++.+++.++        .+... .++.+..... .... .....+..+.++++|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~--------~~~~a-~Dl~~~~~~~-~~~~-~~~~~~~~~~~~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--------TPGVA-ADLSHIETRA-TVKG-YLGPEQLPDCLKGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--------HHHHH-HHHTTSSSSC-EEEE-EESGGGHHHHHTTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccc--------cchhh-HHHhhhhhhc-CCCe-EEcCCChHHHhCCCC
Confidence            799999999999999999988874  788888754        22211 1222211111 1111 112455667778999


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +||..||......++.. +.++.|....+.+++.++++++-..++.+|
T Consensus        71 ivVitag~~~~~g~sR~-~ll~~N~~i~~~i~~~i~~~~p~~iiivvt  117 (144)
T d1mlda1          71 VVVIPAGVPRKPGMTRD-DLFNTNATIVATLTAACAQHCPDAMICIIS  117 (144)
T ss_dssp             EEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             EEEECCCcCCCCCCCcc-hHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence            99999997666555554 889999999999999999998333444444

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.68  E-value=9.7e-08  Score=68.40  Aligned_cols=115  Identities=11%  Similarity=0.018  Sum_probs=77.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccc---hhhhhcC-CCCCCCEEEEecCCCChhhHHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKD---LSFLKNL-PGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      |||.|+||+|.+|+.++..|+.++  .++.++++++     ...+.   ...+... .....+++....--.|.+    .
T Consensus         1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~-----~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~----~   71 (145)
T d1hyea1           1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREH-----SINKLEGLREDIYDALAGTRSDANIYVESDENLR----I   71 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGG-----GHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG----G
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCcccccccccchh-----hhHhhhcccccchhcccccccCCccccCCcchHH----H
Confidence            589999999999999999999887  4888888865     11111   1112211 111223333222111222    4


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      ++++|+||-+||......++.. +.++.|..-.+.+.+.+++.+ .+.++.+
T Consensus        72 l~~aDvVVitAG~~~~~g~sR~-dl~~~Na~iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          72 IDESDVVIITSGVPRKEGMSRM-DLAKTNAKIVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             GTTCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-CCEEEEC
T ss_pred             hccceEEEEecccccCCCCChh-hhhhhhHHHHHHHHHHHhccC-CCeEEEE
Confidence            5689999999998766555554 889999999999999999988 4555544

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=1.9e-07  Score=66.88  Aligned_cols=115  Identities=15%  Similarity=0.092  Sum_probs=75.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc---CCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH---GYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||.|+|++|.+|+.++..|..+   ..++.+++..+     ......-.+..... ......+ .+-.+   ++ .+++
T Consensus         1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-----~~~g~a~Dl~h~~~-~~~~~~~-~~~~~---~~-~~~~   69 (145)
T d2cmda1           1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-----VTPGVAVDLSHIPT-AVKIKGF-SGEDA---TP-ALEG   69 (145)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-----THHHHHHHHHTSCS-SCEEEEE-CSSCC---HH-HHTT
T ss_pred             CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-----cchhHHHHHHCCcc-ccCCcEE-EcCCC---cc-ccCC
Confidence            58999999999999999888643   36888888754     11111112222211 1122221 11222   32 4678


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +|+||.+||.......+.. +.++.|....+.+.+.+.+.++-..+|.+|
T Consensus        70 aDvvvitaG~~~k~g~~R~-dl~~~N~~i~~~v~~~i~~~~p~aivivvt  118 (145)
T d2cmda1          70 ADVVLISAGVRRKPGMDRS-DLFNVNAGIVKNLVQQVAKTCPKACIGIIT  118 (145)
T ss_dssp             CSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred             CCEEEECCCccCCCCcchh-hHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence            9999999998766555554 889999999999999999998444455555

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.64  E-value=2.8e-08  Score=70.52  Aligned_cols=71  Identities=13%  Similarity=0.072  Sum_probs=59.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      |+|+|+|+ |.+|+.+++.|.+.|++|+++++++        +....+.+.    .++.++.+|.+|++.++++ ++++|
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~--------~~~~~~~~~----~~~~vi~Gd~~~~~~l~~~~i~~a~   67 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDK--------DICKKASAE----IDALVINGDCTKIKTLEDAGIEDAD   67 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHH----CSSEEEESCTTSHHHHHHTTTTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCCh--------hhhhhhhhh----hhhhhccCcccchhhhhhcChhhhh
Confidence            68999998 9999999999999999999999987        555544331    1567899999999999888 46789


Q ss_pred             EEEEe
Q 023244           85 GVLHV   89 (285)
Q Consensus        85 ~vih~   89 (285)
                      +++-+
T Consensus        68 ~vv~~   72 (132)
T d1lssa_          68 MYIAV   72 (132)
T ss_dssp             EEEEC
T ss_pred             hhccc
Confidence            88864

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=98.60  E-value=7.5e-08  Score=69.14  Aligned_cols=117  Identities=15%  Similarity=0.185  Sum_probs=72.7

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCcc-chhhhhcCCCCCCCEEEEecCCCChhhHH
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSK-DLSFLKNLPGASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |.. +|||.|+|+ |++|+.++..|+.+|  .++.+++++..     ..+ ....+..............+|.   +   
T Consensus         2 m~~-~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~-----~~~g~a~Dl~~a~~~~~~~~~~~~d~---~---   68 (146)
T d1ez4a1           2 MPN-HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKD-----RTKGDALDLEDAQAFTAPKKIYSGEY---S---   68 (146)
T ss_dssp             BTT-BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH-----HHHHHHHHHHGGGGGSCCCEEEECCG---G---
T ss_pred             CCC-CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccc-----hhHHHHHHHhccccccCCceEeeccH---H---
Confidence            443 679999996 999999999999887  58999998751     000 0111111101112334445554   2   


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                       .++++|+||.+|+.......+.. ..++.|+...+.+.+.+++.+ .+-++.+-|
T Consensus        69 -~~~~adivvitag~~~~~g~~r~-~l~~~N~~i~~~~~~~i~~~~-p~aivivvt  121 (146)
T d1ez4a1          69 -DCKDADLVVITAGAPQKPGESRL-DLVNKNLNILSSIVKPVVDSG-FDGIFLVAA  121 (146)
T ss_dssp             -GGTTCSEEEECCCC-----------CHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred             -HhccccEEEEecccccCCCCCHH-HHHHHHHHHHHHHHHHHhhcC-CCcEEEEeC
Confidence             24689999999987665444443 778899999999999999998 444554443

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.54  E-value=6.7e-07  Score=64.29  Aligned_cols=116  Identities=20%  Similarity=0.241  Sum_probs=77.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .++||.|+|| |++|+.++..|+.++.  ++.++++++.    ........+... ......+.....|.   +    .+
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~----~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~----~l   72 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANES----KAIGDAMDFNHGKVFAPKPVDIWHGDY---D----DC   72 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH----HHHHHHHHHHHHTTSSSSCCEEEECCG---G----GT
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccc----cccchhccHhhCccccCCCeEEEECCH---H----Hh
Confidence            4578999997 9999999999998874  7988888651    000011112111 11122344444443   2    35


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +++|+||.+++.......... +.+..|..-.+.+.+.+++.++-..++.+|
T Consensus        73 ~daDvvvitag~~~~~~~~R~-dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt  123 (148)
T d1ldna1          73 RDADLVVICAGANQKPGETRL-DLVDKNIAIFRSIVESVMASGFQGLFLVAT  123 (148)
T ss_dssp             TTCSEEEECCSCCCCTTTCSG-GGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred             ccceeEEEecccccccCcchh-HHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence            689999999998766544544 778899999999999999988444455443

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=98.52  E-value=4e-07  Score=64.80  Aligned_cols=115  Identities=11%  Similarity=-0.018  Sum_probs=75.3

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      ||.|+||+|.+|+.++..|+.++.  ++.+++......  ........+........+.+....|.   ++    ++++|
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~--~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~----~~~aD   72 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKED--DTVGQAADTNHGIAYDSNTRVRQGGY---ED----TAGSD   72 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHH--HHHHHHHHHHHHHTTTCCCEEEECCG---GG----GTTCS
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCccc--ccceeecchhhcccccCCceEeeCCH---HH----hhhcC
Confidence            799999999999999999998874  788877532000  00001111211001123444444543   22    46899


Q ss_pred             EEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           85 GVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        85 ~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      +||-.||......++.. +.++.|..-.+.+.+.+++.++-..++.+
T Consensus        73 iVvitaG~~~~~g~~R~-dl~~~N~~I~~~i~~~i~~~~p~~i~ivv  118 (142)
T d1o6za1          73 VVVITAGIPRQPGQTRI-DLAGDNAPIMEDIQSSLDEHNDDYISLTT  118 (142)
T ss_dssp             EEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHTTCSCCEEEEC
T ss_pred             EEEEecccccccCCchh-hHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence            99999997666555554 88999999999999999999833344444

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=98.51  E-value=1.2e-06  Score=62.40  Aligned_cols=114  Identities=7%  Similarity=0.084  Sum_probs=71.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++||.|+|+ |.+|+.++..|+.++.  ++.+++++..    ........+........+.....+|   .+    .+++
T Consensus         1 r~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~----~~~g~a~Dl~~~~~~~~~~~~~~~~---~~----~~~~   68 (142)
T d1y6ja1           1 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKE----KAIGEAMDINHGLPFMGQMSLYAGD---YS----DVKD   68 (142)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC-------CCHHHHHHTTSCCCTTCEEEC--C---GG----GGTT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCC----ccceeeeeeccCcccCCCeeEeeCc---HH----HhCC
Confidence            358999997 9999999999998874  8999998761    0011111122211122344433332   22    3568


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      +|+|+-.|+......+... ..++.|..-.+.+++.+.++++-..++.+
T Consensus        69 adivvitag~~~~~~~~r~-~l~~~N~~i~~~i~~~i~~~~p~ai~ivv  116 (142)
T d1y6ja1          69 CDVIVVTAGANRKPGETRL-DLAKKNVMIAKEVTQNIMKYYNHGVILVV  116 (142)
T ss_dssp             CSEEEECCCC------CHH-HHHHHHHHHHHHHHHHHHHHCCSCEEEEC
T ss_pred             CceEEEecccccCcCcchh-HHhhHHHHHHHHHHHHhhccCCCceEEEe
Confidence            9999999997766555554 88899999999999999998833344443

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=98.49  E-value=1.5e-07  Score=66.78  Aligned_cols=70  Identities=14%  Similarity=0.124  Sum_probs=57.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      |+++|.|+ |-+|+.+++.|.+.|++|++++.++        +....+.+.     ....+.+|.++++.+.++ ++++|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~--------~~~~~~~~~-----~~~~~~gd~~~~~~l~~a~i~~a~   66 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINE--------EKVNAYASY-----ATHAVIANATEENELLSLGIRNFE   66 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCH--------HHHHHTTTT-----CSEEEECCTTCTTHHHHHTGGGCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcH--------HHHHHHHHh-----CCcceeeecccchhhhccCCcccc
Confidence            57899988 9999999999999999999999987        555555433     456778999999999887 67899


Q ss_pred             EEEEe
Q 023244           85 GVLHV   89 (285)
Q Consensus        85 ~vih~   89 (285)
                      .||-.
T Consensus        67 ~vi~~   71 (134)
T d2hmva1          67 YVIVA   71 (134)
T ss_dssp             EEEEC
T ss_pred             EEEEE
Confidence            88754

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.45  E-value=4.8e-07  Score=67.28  Aligned_cols=74  Identities=22%  Similarity=0.247  Sum_probs=58.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      .|+|+|.|| |.+|+.+++.|.++|++|++++|+.        ++...+.+.   .........+..+.......+...|
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~--------~~a~~l~~~---~~~~~~~~~~~~~~~~~~~~i~~~~   69 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTL--------ESAKKLSAG---VQHSTPISLDVNDDAALDAEVAKHD   69 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCH--------HHHHHHHTT---CTTEEEEECCTTCHHHHHHHHTTSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCh--------HHHHHHHhc---ccccccccccccchhhhHhhhhccc
Confidence            489999998 9999999999999999999999988        555555442   1245556677777788888888889


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      .++.+.
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            888654

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=98.45  E-value=2e-07  Score=67.52  Aligned_cols=118  Identities=13%  Similarity=0.058  Sum_probs=76.3

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCC----CCCCEEEEecCCCChhh
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG----ASERLRIFHADLSHPDG   75 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~   75 (285)
                      |.++++||.|+|+ |.+|+.++..|+..+. ++.+++.++.       .......++.+    .......     .....
T Consensus         3 ~~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~-------~~~g~a~Dl~~~~~~~~~~~~~-----~~~~~   69 (154)
T d1pzga1           3 LVQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKG-------MPEGKALDLSHVTSVVDTNVSV-----RAEYS   69 (154)
T ss_dssp             CCSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSS-------HHHHHHHHHHHHHHHTTCCCCE-----EEECS
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccc-------cchhHHHHHhhhccccCCeeEE-----eccCc
Confidence            4556789999998 9999999998887774 8888887651       11111111100    0001000     11123


Q ss_pred             HHHHhcCCCEEEEecccCCCCCC-----ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           76 FDAAIAGCTGVLHVATPVDFEDK-----EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        76 ~~~~~~~~d~vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      .++.++++|+|+-.++......+     .. ...+..|....+.+++.+.+.+ .+-++.+-|
T Consensus        70 ~~~~~~~adiVvitag~~~~~g~~~~~~tR-~~l~~~n~~iv~~i~~~i~~~~-p~aiviivs  130 (154)
T d1pzga1          70 YEAALTGADCVIVTAGLTKVPGKPDSEWSR-NDLLPFNSKIIREIGQNIKKYC-PKTFIIVVT  130 (154)
T ss_dssp             HHHHHTTCSEEEECCSCSSCTTCCGGGCCG-GGGHHHHHHHHHHHHHHHHHHC-TTCEEEECC
T ss_pred             hhhhhcCCCeEEEecccccCCCCCCcccch-hhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeC
Confidence            45667899999999987655322     33 3778899999999999999998 445554443

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.31  E-value=4.3e-07  Score=65.88  Aligned_cols=120  Identities=20%  Similarity=0.097  Sum_probs=73.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCC----e-E--EEEecCCCCccccCccchhhhh-cCCC-CCCCEEEEecCCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGY----S-V--TTTVRSELDPEHRNSKDLSFLK-NLPG-ASERLRIFHADLS   71 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~----~-V--~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~   71 (285)
                      |+ ..+||.|+||+|++|+.++..|+..+.    . +  .++.-..      ..+...... +... .......+...  
T Consensus         1 m~-~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~--   71 (154)
T d1y7ta1           1 MK-APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ------AMKALEGVVMELEDCAFPLLAGLEAT--   71 (154)
T ss_dssp             CC-CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHTTTCTTEEEEEEE--
T ss_pred             CC-CCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhcccc------chhhHcCchhhhhccccccccccccC--
Confidence            55 356999999999999999999987642    1 1  1111111      111111111 1111 11223322222  


Q ss_pred             ChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCc-cEEEEec
Q 023244           72 HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTV-KRVVYTS  132 (285)
Q Consensus        72 d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~S  132 (285)
                        ....+.++++|+||-+||.......+.. +.++.|+.-.+.+.+.+.+..+. ..++.+|
T Consensus        72 --~~~~~~~~~advViitaG~~~~pg~~r~-dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          72 --DDPKVAFKDADYALLVGAAPRKAGMERR-DLLQVNGKIFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             --SCHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             --CchhhhcccccEEEeecCcCCCCCCcHH-HHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence              2344667899999999998777666664 88899999999999999987522 3444444

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=98.26  E-value=1.2e-05  Score=59.02  Aligned_cols=114  Identities=12%  Similarity=0.018  Sum_probs=72.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-----Ce--EEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChh
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-----YS--VTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPD   74 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-----~~--V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~   74 (285)
                      .||.||||+|.||+.++..|++.+     ..  +.+++...      ..+...    .+.+...  ....-+..    ..
T Consensus        25 ~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~------~~~~l~g~~mdl~d~a~--~~~~~~~~----~~   92 (175)
T d7mdha1          25 VNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSER------SFQALEGVAMELEDSLY--PLLREVSI----GI   92 (175)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHTTTC--TTEEEEEE----ES
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCcc------ccchhcchhhhhccccc--ccccCccc----cc
Confidence            379999999999999999998742     22  33333322      111111    1122211  12221111    12


Q ss_pred             hHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEec
Q 023244           75 GFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGT-VKRVVYTS  132 (285)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~v~~S  132 (285)
                      ...+.++++|+||-.||.......... +.++.|....+.+.+++.+..+ -.+++.+|
T Consensus        93 ~~~~~~~~aDvVvi~ag~~rkpg~tR~-Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          93 DPYEVFEDVDWALLIGAKPRGPGMERA-ALLDINGQIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             CHHHHTTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             cchhhccCCceEEEeeccCCCCCCcHH-HHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence            345667899999999998777666664 8999999999999999999752 23454444

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=98.25  E-value=5.7e-06  Score=59.80  Aligned_cols=116  Identities=16%  Similarity=0.058  Sum_probs=76.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      +++||.|+|+ |.+|+.++..|+.+|.  ++.+++++..    ........+.... ...........|..+       +
T Consensus        19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~----~a~g~alDl~h~~~~~~~~~~~~~~d~~~-------~   86 (160)
T d1i0za1          19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLED----KLKGEMMDLQHGSLFLQTPKIVADKDYSV-------T   86 (160)
T ss_dssp             CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHH----HHHHHHHHHHHTGGGCCCSEEEECSSGGG-------G
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccc----hhHHHHHHHhccccccCCCeEEeccchhh-------c
Confidence            4579999997 9999999999999885  7888887651    0000111121111 111222222333322       4


Q ss_pred             cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           81 AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        81 ~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +++|+||..||......++.. ..++.|....+.+++.+++.+.-.-+|.+|
T Consensus        87 ~~adiVVitAg~~~~~g~tR~-~l~~~N~~i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          87 ANSKIVVVTAGVRQQEGESRL-NLVQRNVNVFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             TTCSEEEECCSCCCCTTCCGG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred             ccccEEEEecCCccccCcchH-HHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence            689999999998766555554 888999999999999999988333455444

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.24  E-value=3e-06  Score=60.16  Aligned_cols=113  Identities=16%  Similarity=0.158  Sum_probs=74.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      |||.|+|+ |.+|+.++..|+.++  .++.+++.+...  .. ....+.....+ ...+......|   .+    .++++
T Consensus         1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~--~~-g~~~Dl~~~~~-~~~~~~~~~~~---~~----~~~~a   68 (140)
T d1a5za1           1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKR--AE-GDALDLIHGTP-FTRRANIYAGD---YA----DLKGS   68 (140)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH--HH-HHHHHHHHHGG-GSCCCEEEECC---GG----GGTTC
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeccccc--cc-chhcccccccc-ccccccccCCc---HH----HhcCC
Confidence            58999997 999999999998876  488888876510  00 00111111111 11233444433   22    25689


Q ss_pred             CEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           84 TGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        84 d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      |+||-+|+.......... +.+..|..-.+.+++.+++.+ .+-++.+-
T Consensus        69 divvitag~~~~~g~~r~-dl~~~N~~I~~~i~~~i~~~~-p~aivivv  115 (140)
T d1a5za1          69 DVVIVAAGVPQKPGETRL-QLLGRNARVMKEIARNVSKYA-PDSIVIVV  115 (140)
T ss_dssp             SEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred             CEEEEecccccCCCcchh-hhhccccchHHHHHHHHHhcC-CCcEEEEe
Confidence            999999998776555554 788889999999999999998 44444443

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=98.23  E-value=7.6e-07  Score=63.58  Aligned_cols=112  Identities=10%  Similarity=-0.010  Sum_probs=73.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccch-hhhhcCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDL-SFLKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      |||.|+|| |.+|+.++..|+..+  .++.+++.++.     ..+.. ..+.... ....+.++...  .|.+    .++
T Consensus         1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~-----~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~----~~~   68 (142)
T d1guza1           1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEG-----IPQGKALDMYESGPVGLFDTKVTGS--NDYA----DTA   68 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSS-----HHHHHHHHHHTTHHHHTCCCEEEEE--SCGG----GGT
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccc-----cchhhhhhhhcccchhcccceEEec--CCHH----Hhc
Confidence            58999997 999999999999887  58999998761     10100 0111110 01122333221  2222    356


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEe
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYT  131 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~  131 (285)
                      ++|+|+-+||.......+.. ..++.|..-.+.+++.+++.+ .+-++.+
T Consensus        69 dadvvvitag~~~~~g~~r~-~l~~~N~~i~~~i~~~i~~~~-p~aiviv  116 (142)
T d1guza1          69 NSDIVIITAGLPRKPGMTRE-DLLMKNAGIVKEVTDNIMKHS-KNPIIIV  116 (142)
T ss_dssp             TCSEEEECCSCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHC-SSCEEEE
T ss_pred             CCeEEEEEEecCCCCCCchH-HHHHHHHHHHHHHHHHhhccC-CCeEEEE
Confidence            89999999998666555554 888999999999999999988 4444443

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=98.18  E-value=1.7e-05  Score=56.23  Aligned_cols=111  Identities=13%  Similarity=0.127  Sum_probs=74.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchh----hhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLS----FLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      .||.|+|+ |.+|+.++..|+.++.  ++.++++++        ++.+    .+...........+...  .+.+    .
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~--------~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~----~   66 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAK--------ERVEAEVLDMQHGSSFYPTVSIDGS--DDPE----I   66 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSH--------HHHHHHHHHHHHTGGGSTTCEEEEE--SCGG----G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEecc--------ccchhHHHHHHhccccCCCceeecC--CCHH----H
Confidence            47999997 9999999999998874  888888765        2111    12221111122233222  1222    2


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++++|+||-.||.......... +.++.|..-.+.+++.+++.++-.-++.+|
T Consensus        67 ~~daDvVVitaG~~~~~g~~R~-dl~~~N~~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          67 CRDADMVVITAGPRQKPGQSRL-ELVGATVNILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             GTTCSEEEECCCCCCCTTCCHH-HHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred             hhCCcEEEEecccccCCCCchh-hhhhhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            4679999999998776656664 888999999999999999998333444433

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=98.18  E-value=2.4e-06  Score=60.91  Aligned_cols=35  Identities=20%  Similarity=0.296  Sum_probs=27.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-C---eEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-Y---SVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~---~V~~~~r~~   39 (285)
                      ||||.|.||||++|+.+++.|+++. +   +++++.++.
T Consensus         1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~   39 (146)
T d1t4ba1           1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ   39 (146)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS
T ss_pred             CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccc
Confidence            4689999999999999999888763 2   566555543

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.14  E-value=3.7e-06  Score=59.91  Aligned_cols=35  Identities=20%  Similarity=0.238  Sum_probs=27.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~   38 (285)
                      +.|+|.|.||||++|+.|++.|.+++|   ++..+..+
T Consensus         1 q~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~   38 (144)
T d2hjsa1           1 QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASA   38 (144)
T ss_dssp             CCCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeec
Confidence            357999999999999999999976554   66665543

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=98.13  E-value=7.3e-06  Score=58.44  Aligned_cols=114  Identities=13%  Similarity=0.114  Sum_probs=70.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccchhhhhc-CCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDLSFLKN-LPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||.|+|+ |++|+.++..|+.+|  .++.+++++..    ........+.. .............|.   +    .+++
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~----~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~----~l~~   69 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEA----KVKADQIDFQDAMANLEAHGNIVINDW---A----ALAD   69 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHH----HHHHHHHHHHHHGGGSSSCCEEEESCG---G----GGTT
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccc----hhhhHHHhhhccccccCCccceeccCH---H----Hhcc
Confidence            68999996 999999999999877  47888887651    00000011111 111122333334432   2    2468


Q ss_pred             CCEEEEecccCCCCC----CChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           83 CTGVLHVATPVDFED----KEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        83 ~d~vih~a~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      +|+||-.||......    .+. ...++.|....+.+.+.+++.+ .+-++.+-|
T Consensus        70 adiVVitaG~~~~~~~~~g~~R-~~l~~~N~~i~~~i~~~i~~~~-p~aivivvt  122 (146)
T d1hyha1          70 ADVVISTLGNIKLQQDNPTGDR-FAELKFTSSMVQSVGTNLKESG-FHGVLVVIS  122 (146)
T ss_dssp             CSEEEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECS
T ss_pred             ccEEEEeccccccccccCCccH-HHHHHHHHHHHHHHHHHHhhcC-CCeEEEEec
Confidence            999999999755311    122 2567889999999999999988 444444433

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.06  E-value=4.3e-05  Score=54.03  Aligned_cols=110  Identities=13%  Similarity=0.064  Sum_probs=73.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCCCCccccCccch-hh---hhcC-CCCCCCEEEE-ecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSELDPEHRNSKDL-SF---LKNL-PGASERLRIF-HADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~-~~---~~~~-~~~~~~~~~~-~~Dl~d~~~~~   77 (285)
                      |||.|+|+ |.+|+.++..|+.+|  .++.+++.++        ++. ..   +... .......... ..|.   +   
T Consensus         1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~--------~~~~g~alDl~~~~~~~~~~~~i~~~~d~---~---   65 (142)
T d1ojua1           1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAE--------DLAVGEAMDLAHAAAGIDKYPKIVGGADY---S---   65 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSH--------HHHHHHHHHHHHHHHTTTCCCEEEEESCG---G---
T ss_pred             CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEeccc--------chhhHHHHHHhhhccccCCCCccccCCCH---H---
Confidence            58999997 999999999998877  4788888765        221 11   1110 0011122222 2232   2   


Q ss_pred             HHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           78 AAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                       .++++|+||-.|+.......+.. +.+..|..-.+.+.+.+++.+ .+-++.+-|
T Consensus        66 -~~~~adiVvitag~~~~~g~~r~-~l~~~n~~i~~~i~~~i~~~~-p~aivivvt  118 (142)
T d1ojua1          66 -LLKGSEIIVVTAGLARKPGMTRL-DLAHKNAGIIKDIAKKIVENA-PESKILVVT  118 (142)
T ss_dssp             -GGTTCSEEEECCCCCCCSSCCHH-HHHHHHHHHHHHHHHHHHTTS-TTCEEEECS
T ss_pred             -HhccccEEEEeccccCCCCCchH-HHHHHhhHHHHHHHHHHHhhC-CCcEEEEec
Confidence             45689999999997776555664 888899999999999999988 444444443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.04  E-value=1.8e-05  Score=56.95  Aligned_cols=107  Identities=16%  Similarity=-0.003  Sum_probs=67.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-----C--eEEEEecCCCCccccCccchhhh----hcCCCCCCCEEEEecCCCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-----Y--SVTTTVRSELDPEHRNSKDLSFL----KNLPGASERLRIFHADLSH   72 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-----~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~Dl~d   72 (285)
                      ..+||.|+||+|.+|+.++..|++.+     .  ++..++.+.      ...+...+    ....  ......+..    
T Consensus         2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~------~~~~~~~l~~~~~~~~--~~~~~~~~~----   69 (154)
T d5mdha1           2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP------MMGVLDGVLMELQDCA--LPLLKDVIA----   69 (154)
T ss_dssp             CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG------GHHHHHHHHHHHHHTC--CTTEEEEEE----
T ss_pred             CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc------chhhhhhhhhhhcccc--ccccccccc----
Confidence            35799999999999999999998643     1  233333322      11111111    1111  112222221    


Q ss_pred             hhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 023244           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (285)
                      .....+.++++|+||-++|.......+.. +.++.|..-.+.+.+.+.+..
T Consensus        70 ~~~~~~~~~~~dvVVitag~~~~~g~sr~-dll~~N~~i~k~~~~~i~k~a  119 (154)
T d5mdha1          70 TDKEEIAFKDLDVAILVGSMPRRDGMERK-DLLKANVKIFKCQGAALDKYA  119 (154)
T ss_dssp             ESCHHHHTTTCSEEEECCSCCCCTTCCTT-TTHHHHHHHHHHHHHHHHHHS
T ss_pred             CcccccccCCceEEEEecccCCCCCCchh-HHHHHhHHHHHHHHHHHHhhC
Confidence            12244567899999999998776555554 778999999999999998764

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.02  E-value=1.7e-06  Score=65.14  Aligned_cols=34  Identities=35%  Similarity=0.486  Sum_probs=32.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||.|+||+|.+|+.|++.|++.||+|++.+|++
T Consensus         1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~   34 (212)
T d1jaya_           1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRRE   34 (212)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred             CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence            5799999999999999999999999999999987

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.98  E-value=2.6e-05  Score=55.29  Aligned_cols=111  Identities=11%  Similarity=0.052  Sum_probs=66.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCC----CCCCEEEE-ecCCCChhhHHH
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPG----ASERLRIF-HADLSHPDGFDA   78 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~Dl~d~~~~~~   78 (285)
                      ++||.|+|+ |.+|+.++..|+.++. ++.+++.+..       .......++.+    ......+. ..|.   +    
T Consensus         1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~-------~~~~~~~Dl~~~~~~~~~~~~i~~~~d~---~----   65 (142)
T d1uxja1           1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEG-------VPQGKALDLYEASPIEGFDVRVTGTNNY---A----   65 (142)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSS-------HHHHHHHHHHTTHHHHTCCCCEEEESCG---G----
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccc-------cchhHHHHhhccccccCCCCEEEecCcH---H----
Confidence            368999997 9999999999988774 8888887651       11111111110    01111111 1222   2    


Q ss_pred             HhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      .++++|+||-+||.......+. .+.++.|....+.+++.+.+.+ .+-++.+-
T Consensus        66 ~~~~advvvitag~~~~~~~~r-~dl~~~N~~i~~~i~~~i~k~~-p~aivivv  117 (142)
T d1uxja1          66 DTANSDVIVVTSGAPRKPGMSR-EDLIKVNADITRACISQAAPLS-PNAVIIMV  117 (142)
T ss_dssp             GGTTCSEEEECCSCC----------CHHHHHHHHHHHHHHHGGGC-TTCEEEEC
T ss_pred             HhcCCCEEEEeeeccCCcCcch-hHHHhHHHHHHHHHHHHHhccC-CCceEEEe
Confidence            2357999999999766544444 3778899999999999999988 44444443

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.97  E-value=1.2e-05  Score=58.12  Aligned_cols=115  Identities=13%  Similarity=0.093  Sum_probs=73.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCCCCccccCccchhhhhcCC-CCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSELDPEHRNSKDLSFLKNLP-GASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      +.||.|+|+ |.+|+.++..|+.+|.  ++.+++++..    ........+.... ...........|.   +    .++
T Consensus        19 ~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~----~a~g~alDl~~~~~~~~~~~~~~~~d~---~----~~~   86 (159)
T d2ldxa1          19 RCKITVVGV-GDVGMACAISILLKGLADELALVDADTD----KLRGEALDLQHGSLFLSTPKIVFGKDY---N----VSA   86 (159)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHH----HHHHHHHHHHHTTTTCSCCEEEEESSG---G----GGT
T ss_pred             CCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCch----hhhccHHHHhCcchhcCCCeEEeccch---h----hhc
Confidence            458999997 9999999999998874  7888887650    0000111122211 1122222333333   2    236


Q ss_pred             CCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           82 GCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        82 ~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ++|+||-.||.......+.. ..++.|....+.+.+.+++.++-..++.+|
T Consensus        87 ~adivvitag~~~~~~~~R~-dll~~N~~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          87 NSKLVIITAGARMVSGQTRL-DLLQRNVAIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             TEEEEEECCSCCCCTTTCSS-CTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred             cccEEEEecccccCCCCCHH-HHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence            89999999998666544443 668889999999999999887334455444

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.96  E-value=4.3e-06  Score=63.37  Aligned_cols=81  Identities=15%  Similarity=0.164  Sum_probs=51.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEE-EE-----ecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLR-IF-----HADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~-----~~Dl~d~~~~~   77 (285)
                      |||.|.|. ||+|..++..|++.|++|++++.+.        ++...+..-..  ..+... .+     ...+.-..++.
T Consensus         1 MkI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~--------~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~   71 (202)
T d1mv8a2           1 MRISIFGL-GYVGAVCAGCLSARGHEVIGVDVSS--------TKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK   71 (202)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred             CEEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCH--------HHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHH
Confidence            57999977 9999999999999999999999876        34333332110  000000 00     01111223466


Q ss_pred             HHhcCCCEEEEecccCCC
Q 023244           78 AAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~~~   95 (285)
                      +.++++|+++-+.+....
T Consensus        72 ~~i~~~d~i~i~VpTP~~   89 (202)
T d1mv8a2          72 KAVLDSDVSFICVGTPSK   89 (202)
T ss_dssp             HHHHTCSEEEECCCCCBC
T ss_pred             HHHhhCCEEEEecCcccc
Confidence            677789999998876543

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.88  E-value=1.6e-05  Score=56.84  Aligned_cols=113  Identities=12%  Similarity=0.039  Sum_probs=70.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCC----CCCCEEEEecCCCChhhHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPG----ASERLRIFHADLSHPDGFDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~   78 (285)
                      +++||.|+|+ |.+|+.++..|..++ .++.+++++..       .......++.+    ...+......  .+.    +
T Consensus         2 p~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~-------~~~g~a~Dl~~~~~~~~~~~~v~~~--~~~----~   67 (150)
T d1t2da1           2 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKN-------MPHGKALDTSHTNVMAYSNCKVSGS--NTY----D   67 (150)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSS-------HHHHHHHHHHTHHHHHTCCCCEEEE--CCG----G
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCC-------cceeeecchhhhccccCCCcEEEec--ccc----c
Confidence            3578999996 999999998777766 37888887651       11111111111    0112222221  122    2


Q ss_pred             HhcCCCEEEEecccCCCCCC-----ChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           79 AIAGCTGVLHVATPVDFEDK-----EPEEVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        79 ~~~~~d~vih~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      .++++|+||-+++......+     +. ...++.|....+.+++.+++.+ .+-++.+-
T Consensus        68 ~~~~advvvitag~~~~~g~~~~~~~R-~~l~~~N~~iv~~i~~~i~~~~-p~aivivv  124 (150)
T d1t2da1          68 DLAGADVVIVTAGFTKAPGKSDKEWNR-DDLLPLNNKIMIEIGGHIKKNC-PNAFIIVV  124 (150)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCG-GGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred             ccCCCcEEEEecccccCCCCCccccch-hHHHHHHHHHHHHHHHHHHhcC-CCeEEEEe
Confidence            34689999999997554221     23 3778999999999999999998 44444443

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.88  E-value=6.9e-06  Score=59.15  Aligned_cols=39  Identities=18%  Similarity=0.411  Sum_probs=35.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+..+|+|.|+||.|.+|+.+++.|.+.||+|.+.+|+.
T Consensus         5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~   43 (152)
T d2pv7a2           5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDRED   43 (152)
T ss_dssp             SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred             cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccc
Confidence            455678999999999999999999999999999999976

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.80  E-value=1.9e-05  Score=58.01  Aligned_cols=74  Identities=18%  Similarity=0.114  Sum_probs=51.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++++|+|+||+|.+|...++.+...|.+|+++++++        ++.+.++++..     ..+ .|..+.......-+++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~--------~~~~~~~~lGa-----~~~-i~~~~~~~~~~~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRP--------EKLALPLALGA-----EEA-ATYAEVPERAKAWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSG--------GGSHHHHHTTC-----SEE-EEGGGHHHHHHHTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccc--------ccccccccccc-----cee-eehhhhhhhhhccccc
Confidence            467899999999999999998888899999999877        55566665521     111 2333322222223468


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+||.+.|
T Consensus        93 D~v~d~~G  100 (171)
T d1iz0a2          93 DLVLEVRG  100 (171)
T ss_dssp             EEEEECSC
T ss_pred             cccccccc
Confidence            99999766

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.80  E-value=3.4e-05  Score=57.17  Aligned_cols=77  Identities=14%  Similarity=0.115  Sum_probs=54.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--   81 (285)
                      ++.+|||+||+|.+|...++.....|.+|+++++++        ++.+.++....   ...+..-|-...+.+.+...  
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~--------~~~~~~~~~Ga---~~vi~~~~~~~~~~~~~~~~~~   97 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSD--------EKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPD   97 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTT
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCH--------HHHHHHHhhhh---hhhcccccccHHHHHHHHhhcC
Confidence            467999999999999999998888899999999987        56666666521   22222233333344444433  


Q ss_pred             CCCEEEEecc
Q 023244           82 GCTGVLHVAT   91 (285)
Q Consensus        82 ~~d~vih~a~   91 (285)
                      ++|+|+++.|
T Consensus        98 Gvd~v~D~vG  107 (182)
T d1v3va2          98 GYDCYFDNVG  107 (182)
T ss_dssp             CEEEEEESSC
T ss_pred             CCceeEEecC
Confidence            4899999876

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.77  E-value=8e-06  Score=60.64  Aligned_cols=76  Identities=14%  Similarity=-0.007  Sum_probs=50.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC---CCCCEEEEecCCCChhhHHHHhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG---ASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      |||.|+|| |.+|..++..|++.|++|++++|++        +....+.....   ..+.............+..+.+++
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~   72 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDA--------QRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKD   72 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTT
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCH--------HHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcC
Confidence            79999999 9999999999999999999999986        33333222110   011111111112122346778889


Q ss_pred             CCEEEEec
Q 023244           83 CTGVLHVA   90 (285)
Q Consensus        83 ~d~vih~a   90 (285)
                      +|+||-+.
T Consensus        73 aD~iii~v   80 (184)
T d1bg6a2          73 ADVILIVV   80 (184)
T ss_dssp             CSEEEECS
T ss_pred             CCEEEEEE
Confidence            99999764

>d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Vibrio cholerae [TaxId: 666]

Probab=97.77  E-value=5.7e-05  Score=53.49  Aligned_cols=32  Identities=22%  Similarity=0.345  Sum_probs=24.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-C---eEEEEec
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-Y---SVTTTVR   37 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~---~V~~~~r   37 (285)
                      |||.|.|||||+|+.|++.|+++. |   ++..+..
T Consensus         1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss   36 (147)
T d1mb4a1           1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFST   36 (147)
T ss_dssp             CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEES
T ss_pred             CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecc
Confidence            579999999999999999888653 3   4544443

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=97.76  E-value=6.1e-05  Score=50.73  Aligned_cols=67  Identities=13%  Similarity=0.110  Sum_probs=52.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc--C
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA--G   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~   82 (285)
                      ..||.|.|| |.+|+-++....+.|+++++++.++.       ......        .-.++.+|..|.+.+.++..  +
T Consensus        11 ~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~-------~PA~~v--------a~~~i~~~~~d~~~l~~~~~~~~   74 (111)
T d1kjqa2          11 ATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD-------APAMHV--------AHRSHVINMLDGDALRRVVELEK   74 (111)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT-------CGGGGG--------SSEEEECCTTCHHHHHHHHHHHC
T ss_pred             CCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC-------Cchhhc--------CCeEEECCCCCHHHHHHHHHhhC
Confidence            468999997 99999999999999999999998761       111111        23577899999999999875  5


Q ss_pred             CCEEE
Q 023244           83 CTGVL   87 (285)
Q Consensus        83 ~d~vi   87 (285)
                      +|+|-
T Consensus        75 ~DviT   79 (111)
T d1kjqa2          75 PHYIV   79 (111)
T ss_dssp             CSEEE
T ss_pred             CceEE
Confidence            78886

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=2.5e-05  Score=57.46  Aligned_cols=74  Identities=12%  Similarity=0.113  Sum_probs=52.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHH---Hh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDA---AI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~   80 (285)
                      ++.+|||+||+|.+|...++.+...|.+|+++++++        ++...++++..   . .+  .|.++.+..++   ..
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~--------~~~~~~~~~Ga---~-~v--i~~~~~~~~~~i~~~t   93 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTE--------EGQKIVLQNGA---H-EV--FNHREVNYIDKIKKYV   93 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH--------HHHHHHHHTTC---S-EE--EETTSTTHHHHHHHHH
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccc--------cccccccccCc---c-cc--cccccccHHHHhhhhh
Confidence            457899999999999999998888899999999876        55566665521   1 12  35555543333   33


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  .+|+|+.+.+
T Consensus        94 ~~~g~d~v~d~~g  106 (174)
T d1yb5a2          94 GEKGIDIIIEMLA  106 (174)
T ss_dssp             CTTCEEEEEESCH
T ss_pred             ccCCceEEeeccc
Confidence            2  3899998766

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.73  E-value=1.3e-05  Score=50.13  Aligned_cols=36  Identities=31%  Similarity=0.441  Sum_probs=32.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++++|||+||+|.+|+..++.+...|.+|+++++++
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~   66 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE   66 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCH
Confidence            356899999999999999998888899999999987

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.73  E-value=1.1e-05  Score=59.00  Aligned_cols=33  Identities=24%  Similarity=0.269  Sum_probs=30.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||.|.|+ |.+|+.+++.|.+.|++|++.+|++
T Consensus         1 MkI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~   33 (165)
T d2f1ka2           1 MKIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQ   33 (165)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCEEEEEECCc
Confidence            57999987 9999999999999999999999986

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=7.9e-05  Score=56.89  Aligned_cols=76  Identities=12%  Similarity=0.088  Sum_probs=53.7

Q ss_pred             CCCeEEEecC----------------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEe
Q 023244            4 GKGRVCVTGG----------------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFH   67 (285)
Q Consensus         4 ~~k~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (285)
                      .+|+||||+|                ||..|.+|++++..+|++|+++.....                ......+..+.
T Consensus         5 ~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~----------------~~~p~~~~~~~   68 (223)
T d1u7za_           5 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS----------------LPTPPFVKRVD   68 (223)
T ss_dssp             TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC----------------CCCCTTEEEEE
T ss_pred             CCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccc----------------cCcccccccce
Confidence            5789999986                799999999999999999999876540                01112455444


Q ss_pred             cCCC-Ch-hhHHHHhcCCCEEEEecccCCC
Q 023244           68 ADLS-HP-DGFDAAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        68 ~Dl~-d~-~~~~~~~~~~d~vih~a~~~~~   95 (285)
                      ..-. +. +.+.+.++++|++|++||..++
T Consensus        69 ~~t~~~m~~~~~~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          69 VMTALEMEAAVNASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             CCSHHHHHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             ehhhHHHHHHHHhhhccceeEeeeechhhh
Confidence            3211 11 2344455679999999998776

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=97.72  E-value=2.9e-05  Score=56.48  Aligned_cols=33  Identities=21%  Similarity=0.296  Sum_probs=31.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||+|+|+ |.+|+.++..|++.|++|++++|+.
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~   33 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVP   33 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCH
Confidence            68999999 9999999999999999999999987

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.65  E-value=5.4e-05  Score=55.95  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=49.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC-CCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL-PGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |+|.|.|| |..|..++..|++.|++|++..|...      .+....+... ....-.......++.-.+++.++++++|
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~------~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad   73 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD------TEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAE   73 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG------HHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc------HHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccc
Confidence            68999999 99999999999999999999998541      1112222211 0000011111122333567888899999


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      +||.+.
T Consensus        74 ~Ii~av   79 (180)
T d1txga2          74 VVLLGV   79 (180)
T ss_dssp             EEEECS
T ss_pred             hhhccc
Confidence            998754

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.64  E-value=0.00013  Score=52.29  Aligned_cols=74  Identities=20%  Similarity=0.287  Sum_probs=56.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccch-hhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDL-SFLKNLPGASERLRIFHADLSHPDGFDAA-IAGC   83 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~   83 (285)
                      -.|+|+|. |-+|..+++.|.+.|++|+++..++        +.. ....+.  ...++.++.+|.+|++.++++ ++++
T Consensus         4 nHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~--------~~~~~~~~~~--~~~~~~vi~Gd~~d~~~L~~a~i~~a   72 (153)
T d1id1a_           4 DHFIVCGH-SILAINTILQLNQRGQNVTVISNLP--------EDDIKQLEQR--LGDNADVIPGDSNDSSVLKKAGIDRC   72 (153)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC--------HHHHHHHHHH--HCTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred             CEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccc--------hhHHHHHHHh--hcCCcEEEEccCcchHHHHHhccccC
Confidence            46999999 9999999999999999999999876        221 122211  123789999999999988776 4668


Q ss_pred             CEEEEec
Q 023244           84 TGVLHVA   90 (285)
Q Consensus        84 d~vih~a   90 (285)
                      +.||-+.
T Consensus        73 ~~vi~~~   79 (153)
T d1id1a_          73 RAILALS   79 (153)
T ss_dssp             SEEEECS
T ss_pred             CEEEEcc
Confidence            9998653

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.62  E-value=4e-05  Score=56.74  Aligned_cols=74  Identities=20%  Similarity=0.121  Sum_probs=53.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      ++.+|||+||+|.+|...++.+...|.+|+++++++        ++.+.+++...   . ..  .|..+.+   .+.+..
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~--------~~~~~l~~~Ga---~-~v--i~~~~~~~~~~v~~~t   90 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD--------AKREMLSRLGV---E-YV--GDSRSVDFADEILELT   90 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHTTCC---S-EE--EETTCSTHHHHHHHHT
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccc--------ccccccccccc---c-cc--ccCCccCHHHHHHHHh
Confidence            457899999999999999998888899999999876        56666665521   2 11  3444443   333333


Q ss_pred             --cCCCEEEEecc
Q 023244           81 --AGCTGVLHVAT   91 (285)
Q Consensus        81 --~~~d~vih~a~   91 (285)
                        +++|+++.+.+
T Consensus        91 ~~~g~d~v~d~~g  103 (183)
T d1pqwa_          91 DGYGVDVVLNSLA  103 (183)
T ss_dssp             TTCCEEEEEECCC
T ss_pred             CCCCEEEEEeccc
Confidence              24899999877

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.62  E-value=4.2e-05  Score=55.27  Aligned_cols=73  Identities=19%  Similarity=0.149  Sum_probs=53.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhh-cCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLK-NLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+++|||+|+ |-+|+.+++.|.+.|. ++++..|+.        ++...+. +.     +.+     ..+.+++.+.+.
T Consensus        23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~--------~ka~~l~~~~-----~~~-----~~~~~~~~~~l~   83 (159)
T d1gpja2          23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTY--------ERAVELARDL-----GGE-----AVRFDELVDHLA   83 (159)
T ss_dssp             TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSH--------HHHHHHHHHH-----TCE-----ECCGGGHHHHHH
T ss_pred             ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcH--------HHHHHHHHhh-----hcc-----cccchhHHHHhc
Confidence            4689999998 9999999999999997 688888876        3333332 22     112     224467888888


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      ++|+||.+.+...+
T Consensus        84 ~~Divi~atss~~~   97 (159)
T d1gpja2          84 RSDVVVSATAAPHP   97 (159)
T ss_dssp             TCSEEEECCSSSSC
T ss_pred             cCCEEEEecCCCCc
Confidence            99999998775443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.60  E-value=3.6e-05  Score=56.80  Aligned_cols=74  Identities=8%  Similarity=-0.033  Sum_probs=53.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH---h
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA---I   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~   80 (285)
                      ++.+|+|+||+|.+|..+++.+...|.+|+++++++        ++.+.++++..   . +  ..|.++.+-.+++   -
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~--------~k~~~~~~lGa---~-~--vi~~~~~d~~~~v~~~t   93 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTA--------QKAQSALKAGA---W-Q--VINYREEDLVERLKEIT   93 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSH--------HHHHHHHHHTC---S-E--EEETTTSCHHHHHHHHT
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccch--------HHHHHHHhcCC---e-E--EEECCCCCHHHHHHHHh
Confidence            457999999999999999998888899999999988        66666666521   1 1  2355554433333   2


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  .+|+|+.+.+
T Consensus        94 ~g~g~d~v~d~~g  106 (179)
T d1qora2          94 GGKKVRVVYDSVG  106 (179)
T ss_dssp             TTCCEEEEEECSC
T ss_pred             CCCCeEEEEeCcc
Confidence            2  3799999876

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=4.3e-05  Score=56.59  Aligned_cols=83  Identities=11%  Similarity=0.059  Sum_probs=58.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      .+|+|+|.|+ |..|+.++..|.+.|. ++++..|++     ...++...+ +... ..........|+.+.+.+.+.+.
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~-----~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   89 (182)
T d1vi2a1          17 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRD-----EFFDKALAFAQRVN-ENTDCVVTVTDLADQQAFAEALA   89 (182)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSS-----TTHHHHHHHHHHHH-HHSSCEEEEEETTCHHHHHHHHH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccch-----HHHHHHHHHHHHHH-hhcCcceEeeecccccchhhhhc
Confidence            4689999999 8889999999999886 788888876     221211111 1110 01133455688899888988888


Q ss_pred             CCCEEEEecccC
Q 023244           82 GCTGVLHVATPV   93 (285)
Q Consensus        82 ~~d~vih~a~~~   93 (285)
                      .+|+|||+....
T Consensus        90 ~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 SADILTNGTKVG  101 (182)
T ss_dssp             TCSEEEECSSTT
T ss_pred             ccceeccccCCc
Confidence            999999997653

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=97.54  E-value=2.9e-05  Score=56.91  Aligned_cols=34  Identities=24%  Similarity=0.245  Sum_probs=27.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRS   38 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~   38 (285)
                      |+||.|.||||++|+.|++.|.++. .++..+..+
T Consensus         1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~   35 (176)
T d1vkna1           1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSR   35 (176)
T ss_dssp             CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECS
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeecc
Confidence            4699999999999999999998864 466666443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.42  E-value=9.8e-05  Score=53.80  Aligned_cols=76  Identities=13%  Similarity=0.010  Sum_probs=52.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCC-ChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLS-HPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~   82 (285)
                      ++.+|+|+|+ |.+|...++.+...|.+|+++++++        ++.+..+++..   . +++  |.. +.+..+...+.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~--------~k~~~a~~lGa---~-~~i--~~~~~~~~~~~~~~~   91 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSS--------RKREDAMKMGA---D-HYI--ATLEEGDWGEKYFDT   91 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSS--------TTHHHHHHHTC---S-EEE--EGGGTSCHHHHSCSC
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccch--------hHHHHhhccCC---c-EEe--eccchHHHHHhhhcc
Confidence            4678999997 9999998888777899999999987        55565555521   1 122  222 23334444556


Q ss_pred             CCEEEEecccCC
Q 023244           83 CTGVLHVATPVD   94 (285)
Q Consensus        83 ~d~vih~a~~~~   94 (285)
                      +|+++.+.+...
T Consensus        92 ~d~vi~~~~~~~  103 (168)
T d1piwa2          92 FDLIVVCASSLT  103 (168)
T ss_dssp             EEEEEECCSCST
T ss_pred             cceEEEEecCCc
Confidence            899999876543

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.42  E-value=0.00012  Score=53.73  Aligned_cols=75  Identities=19%  Similarity=0.291  Sum_probs=48.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh-cCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI-AGC   83 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~   83 (285)
                      +.+|||+||+|.+|+..++.....|.+|+++.+++        ++.....++..   .. .+..+-.+.+....+- +++
T Consensus        32 g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~--------~k~~~~~~lGa---~~-vi~~~~~~~~~~~~~~~~gv   99 (176)
T d1xa0a2          32 RGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKA--------AEHDYLRVLGA---KE-VLAREDVMAERIRPLDKQRW   99 (176)
T ss_dssp             GCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCT--------TCHHHHHHTTC---SE-EEECC---------CCSCCE
T ss_pred             CCEEEEEeccchHHHHHHHHHHHcCCceEEecCch--------HHHHHHHhccc---ce-eeecchhHHHHHHHhhccCc
Confidence            46799999999999999998888899999999987        56666666521   21 1211111112222111 248


Q ss_pred             CEEEEecc
Q 023244           84 TGVLHVAT   91 (285)
Q Consensus        84 d~vih~a~   91 (285)
                      |+|+.+.+
T Consensus       100 D~vid~vg  107 (176)
T d1xa0a2         100 AAAVDPVG  107 (176)
T ss_dssp             EEEEECST
T ss_pred             CEEEEcCC
Confidence            99999877

>d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=97.39  E-value=0.00014  Score=52.14  Aligned_cols=24  Identities=29%  Similarity=0.408  Sum_probs=21.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY   30 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~   30 (285)
                      ||.|.|||||+|++|++.|.++.+
T Consensus         3 kVaIvGATGyvG~eLirlL~~H~f   26 (154)
T d2gz1a1           3 TVAVVGATGAVGAQMIKMLEESTL   26 (154)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred             EEEEECCCcHHHHHHHHHHHcCCC
Confidence            799999999999999999988764

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=97.33  E-value=3.7e-05  Score=57.29  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=49.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC---CCCCCCEEEEecCCCChhhHHHHhc
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL---PGASERLRIFHADLSHPDGFDAAIA   81 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~d~~~~~~~~~   81 (285)
                      |+||.|.|| |..|++++..|++.|++|++.+|++        +....+...   +...+++.+ .-++.-..+++++++
T Consensus         7 m~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~--------~~~~~i~~~~~n~~yl~~~~l-~~~i~~t~~l~~a~~   76 (189)
T d1n1ea2           7 LNKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNE--------EEVRLVNEKRENVLFLKGVQL-ASNITFTSDVEKAYN   76 (189)
T ss_dssp             EEEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCH--------HHHHHHHHHTBCTTTSTTCBC-CTTEEEESCHHHHHT
T ss_pred             eceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecH--------HHHHHHhhccccccccccccc-ccccccchhhhhccC
Confidence            467999999 9999999999999999999999976        333332211   000011111 112222245788889


Q ss_pred             CCCEEEEec
Q 023244           82 GCTGVLHVA   90 (285)
Q Consensus        82 ~~d~vih~a   90 (285)
                      ++|+||-+.
T Consensus        77 ~ad~iiiav   85 (189)
T d1n1ea2          77 GAEIILFVI   85 (189)
T ss_dssp             TCSCEEECS
T ss_pred             CCCEEEEcC
Confidence            999998653

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=97.33  E-value=0.00017  Score=50.04  Aligned_cols=68  Identities=16%  Similarity=0.131  Sum_probs=52.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH-hcCCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA-IAGCT   84 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d   84 (285)
                      |-|+|+|. |-+|+.+++.|.  +++|.++..++        +....+...     ++.++.+|.++++.++++ +++++
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~--------~~~~~~~~~-----~~~~i~Gd~~~~~~L~~a~i~~A~   64 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDE--------NVRKKVLRS-----GANFVHGDPTRVSDLEKANVRGAR   64 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCT--------THHHHHHHT-----TCEEEESCTTSHHHHHHTTCTTCS
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcch--------HHHHHHHhc-----CccccccccCCHHHHHHhhhhcCc
Confidence            46899987 889999999984  56788888877        444444443     788999999999988876 35688


Q ss_pred             EEEEe
Q 023244           85 GVLHV   89 (285)
Q Consensus        85 ~vih~   89 (285)
                      .+|-+
T Consensus        65 ~vi~~   69 (129)
T d2fy8a1          65 AVIVN   69 (129)
T ss_dssp             EEEEC
T ss_pred             EEEEe
Confidence            88854

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.32  E-value=0.00016  Score=52.18  Aligned_cols=65  Identities=17%  Similarity=0.237  Sum_probs=48.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |||-|.|- |.+|+.+++.|++.|++|++.+|++        ++...+.+.     ....       .+...++++++|+
T Consensus         1 MkIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~--------~~~~~~~~~-----~~~~-------~~~~~e~~~~~d~   59 (161)
T d1vpda2           1 MKVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNP--------EAIADVIAA-----GAET-------ASTAKAIAEQCDV   59 (161)
T ss_dssp             CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHT-----TCEE-------CSSHHHHHHHCSE
T ss_pred             CEEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCc--------chhHHHHHh-----hhhh-------cccHHHHHhCCCe
Confidence            57999977 9999999999999999999999987        555554443     1111       1235667778999


Q ss_pred             EEEecc
Q 023244           86 VLHVAT   91 (285)
Q Consensus        86 vih~a~   91 (285)
                      ||-+..
T Consensus        60 ii~~v~   65 (161)
T d1vpda2          60 IITMLP   65 (161)
T ss_dssp             EEECCS
T ss_pred             EEEEcC
Confidence            987643

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.31  E-value=0.00011  Score=52.62  Aligned_cols=65  Identities=15%  Similarity=0.025  Sum_probs=46.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |||.+.|+ |.+|+.+++.|.+.|+++++..|+.        ++...+.+..    ++.       -..+.+++++++|+
T Consensus         1 MkIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~--------~~~~~l~~~~----g~~-------~~~~~~~~~~~~dv   60 (152)
T d2ahra2           1 MKIGIIGV-GKMASAIIKGLKQTPHELIISGSSL--------ERSKEIAEQL----ALP-------YAMSHQDLIDQVDL   60 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHTTSSCEEEEECSSH--------HHHHHHHHHH----TCC-------BCSSHHHHHHTCSE
T ss_pred             CEEEEEec-cHHHHHHHHHHHhCCCeEEEEcChH--------HhHHhhcccc----cee-------eechhhhhhhccce
Confidence            57999987 9999999999999999999999876        3444332210    111       11245667789998


Q ss_pred             EEEec
Q 023244           86 VLHVA   90 (285)
Q Consensus        86 vih~a   90 (285)
                      ||-+.
T Consensus        61 Iilav   65 (152)
T d2ahra2          61 VILGI   65 (152)
T ss_dssp             EEECS
T ss_pred             eeeec
Confidence            88653

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.30  E-value=4.3e-05  Score=55.71  Aligned_cols=43  Identities=33%  Similarity=0.514  Sum_probs=37.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~   56 (285)
                      ..|||+||+|.+|...++.....|.+|++++++.        ++.+.++++
T Consensus        25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~--------~k~~~~~~l   67 (167)
T d1tt7a2          25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNR--------EAADYLKQL   67 (167)
T ss_dssp             CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSS--------STHHHHHHH
T ss_pred             CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCH--------HHHHHHHhh
Confidence            4799999999999999988878899999999988        666666665

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.28  E-value=0.00021  Score=51.68  Aligned_cols=66  Identities=17%  Similarity=0.187  Sum_probs=48.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      |++|.+.|- |.+|+.+++.|++.||+|++.+|++        ++...+....            ........+.++.+|
T Consensus         1 M~kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~--------~~~~~~~~~~------------~~~~~~~~e~~~~~d   59 (162)
T d3cuma2           1 MKQIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQ--------SAVDGLVAAG------------ASAARSARDAVQGAD   59 (162)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHHTT------------CEECSSHHHHHTSCS
T ss_pred             CCEEEEEEE-HHHHHHHHHHHHHCCCeEEEEECch--------hhhhhhhhhh------------ccccchhhhhccccC
Confidence            458999976 9999999999999999999999987        4444444331            111133566778899


Q ss_pred             EEEEecc
Q 023244           85 GVLHVAT   91 (285)
Q Consensus        85 ~vih~a~   91 (285)
                      +++-+..
T Consensus        60 iii~~v~   66 (162)
T d3cuma2          60 VVISMLP   66 (162)
T ss_dssp             EEEECCS
T ss_pred             eeeeccc
Confidence            8887643

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.0002  Score=52.08  Aligned_cols=74  Identities=19%  Similarity=0.094  Sum_probs=53.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++.+|+|.|+ |.+|...++.+...|.+++++++++        ++.+..+++.     ... ..|..+.+......+++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~--------~~~~~a~~lG-----ad~-~i~~~~~~~~~~~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSE--------AKREAAKALG-----ADE-VVNSRNADEMAAHLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSG--------GGHHHHHHHT-----CSE-EEETTCHHHHHTTTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccch--------hHHHHHhccC-----CcE-EEECchhhHHHHhcCCC
Confidence            4678999997 8899999988888899999988877        4555555542     111 24566666565556679


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |++|.+.+.
T Consensus        95 D~vid~~g~  103 (168)
T d1uufa2          95 DFILNTVAA  103 (168)
T ss_dssp             EEEEECCSS
T ss_pred             ceeeeeeec
Confidence            999999873

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.27  E-value=0.002  Score=41.54  Aligned_cols=71  Identities=14%  Similarity=0.097  Sum_probs=47.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|+|.|. |-.|..+++.|.++|++|++.+.+..      ......+.      ..+.+..+...     ...++++
T Consensus         4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~------~~~~~~~~------~~~~~~~~~~~-----~~~~~~~   65 (93)
T d2jfga1           4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT------PPGLDKLP------EAVERHTGSLN-----DEWLMAA   65 (93)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS------CTTGGGSC------TTSCEEESBCC-----HHHHHHC
T ss_pred             CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC------chhHHHHh------hccceeecccc-----hhhhccC
Confidence            5789999999 88999999999999999999998651      11111111      12333333321     2234578


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |.||-.-|.
T Consensus        66 d~vi~SPGi   74 (93)
T d2jfga1          66 DLIVASPGI   74 (93)
T ss_dssp             SEEEECTTS
T ss_pred             CEEEECCCC
Confidence            999987664

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.26  E-value=0.0013  Score=45.22  Aligned_cols=31  Identities=13%  Similarity=0.162  Sum_probs=27.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEe
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTV   36 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~   36 (285)
                      |||.|.|++|-.|+.+.+.+.++++++.+..
T Consensus         1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~i   31 (128)
T d1vm6a3           1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKV   31 (128)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhcCCCeEEEEE
Confidence            5799999999999999998888899877543

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=97.25  E-value=0.0011  Score=45.60  Aligned_cols=89  Identities=15%  Similarity=0.097  Sum_probs=57.6

Q ss_pred             CCCeEEEecCC---chhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHH
Q 023244            4 GKGRVCVTGGT---GFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~   79 (285)
                      ..++|.|+|||   +..|..+.+.|.+.| ++|+.+..+.        +      +..    +.+ ..-++.|      +
T Consensus         7 ~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~--------~------~i~----G~~-~y~sl~d------l   61 (129)
T d2csua1           7 NPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKE--------E------EVQ----GVK-AYKSVKD------I   61 (129)
T ss_dssp             SCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSC--------S------EET----TEE-CBSSTTS------C
T ss_pred             CCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCc--------c------ccC----CeE-eecchhh------c
Confidence            35799999999   999999999987665 5888776554        0      000    111 1123333      2


Q ss_pred             hcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           80 IAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        80 ~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      -..+|.++-+..        +         ..+..+++.+.+.| ++.++.+|+..
T Consensus        62 p~~vDlvvi~vp--------~---------~~~~~~~~~~~~~g-~~~~vi~s~Gf   99 (129)
T d2csua1          62 PDEIDLAIIVVP--------K---------RFVKDTLIQCGEKG-VKGVVIITAGF   99 (129)
T ss_dssp             SSCCSEEEECSC--------H---------HHHHHHHHHHHHHT-CCEEEECCCSS
T ss_pred             CCCCceEEEecC--------h---------HHhHHHHHHHHHcC-CCEEEEecccc
Confidence            246888885432        1         12346678888899 88999888754

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=6.5e-05  Score=55.27  Aligned_cols=43  Identities=33%  Similarity=0.494  Sum_probs=37.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~   56 (285)
                      .+|||+||+|.+|...++.....|.+|+++++++        ++...++++
T Consensus        33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~--------~k~~~~~~l   75 (177)
T d1o89a2          33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRE--------STHEYLKSL   75 (177)
T ss_dssp             CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCG--------GGHHHHHHH
T ss_pred             CcEEEEEccccchHHHHHHHHHcCCCeEEEecch--------hHHHHHHhh
Confidence            4799999999999999988888899999999988        566666655

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=97.22  E-value=6.8e-05  Score=55.51  Aligned_cols=34  Identities=18%  Similarity=0.421  Sum_probs=27.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEec
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVR   37 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (285)
                      ++.||.|.|||||+|+.|++.|.++. .++..+..
T Consensus         4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S   38 (183)
T d2cvoa1           4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTA   38 (183)
T ss_dssp             SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred             CccEEEEECcccHHHHHHHHHHHhCCCceEEEEec
Confidence            45689999999999999999998874 46665543

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.19  E-value=0.00022  Score=52.03  Aligned_cols=75  Identities=16%  Similarity=0.135  Sum_probs=49.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      ++|+|+|.|| |..++.++..|.+.|.+|+++.|+.        ++...+.+.-.....+..+..|  +.+     ...+
T Consensus        17 ~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~--------~ka~~l~~~~~~~~~~~~~~~~--~~~-----~~~~   80 (170)
T d1nyta1          17 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTV--------SRAEELAKLFAHTGSIQALSMD--ELE-----GHEF   80 (170)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSH--------HHHHHHHHHTGGGSSEEECCSG--GGT-----TCCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHhcccceEEEeccchH--------HHHHHHHHHHhhcccccccccc--ccc-----cccc
Confidence            4689999998 8889999999999999999999987        4443333221111233333222  211     2468


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+|||+.....
T Consensus        81 dliIN~Tp~G~   91 (170)
T d1nyta1          81 DLIINATSSGI   91 (170)
T ss_dssp             SEEEECCSCGG
T ss_pred             ceeecccccCc
Confidence            99999875543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=97.17  E-value=0.00046  Score=50.13  Aligned_cols=34  Identities=18%  Similarity=0.255  Sum_probs=29.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~   39 (285)
                      ||+|+|+|+ |.+|+.+++.|.+.|+  +|++.++++
T Consensus         1 Mk~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~   36 (171)
T d2g5ca2           1 MQNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINP   36 (171)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred             CCEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECCh
Confidence            468999987 9999999999999886  688888876

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.16  E-value=0.00033  Score=47.99  Aligned_cols=36  Identities=25%  Similarity=0.194  Sum_probs=32.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ...++++|.|| |+||.+++..|.+.|.+|+++.+.+
T Consensus        21 ~~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          21 EIPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence            34589999999 9999999999999999999999876

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=97.15  E-value=0.00027  Score=54.74  Aligned_cols=38  Identities=34%  Similarity=0.417  Sum_probs=34.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |....|+|+|+|| |..|...+..|+++|++|+++.|+.
T Consensus         2 ~~~~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           2 MMHSQKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             CCCCSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCCCCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4445689999999 9999999999999999999999865

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.15  E-value=0.00038  Score=47.21  Aligned_cols=35  Identities=26%  Similarity=0.269  Sum_probs=32.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        21 ~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   55 (117)
T d1ebda2          21 VPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG   55 (117)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence            4579999999 9999999999999999999999877

>d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.12  E-value=0.0002  Score=52.74  Aligned_cols=32  Identities=16%  Similarity=0.273  Sum_probs=27.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEe
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTV   36 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~   36 (285)
                      |+||.|.|||||+|+.|++.|.++ ..++..+.
T Consensus         1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~   33 (179)
T d2g17a1           1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT   33 (179)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred             CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence            569999999999999999999987 45776554

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.10  E-value=0.0007  Score=49.07  Aligned_cols=75  Identities=20%  Similarity=0.120  Sum_probs=51.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC--CChhhHHHHh-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--SHPDGFDAAI-   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~-   80 (285)
                      .+.+|+|+| +|.+|...++.+...|.+|+++++++        ++.+..+++..   ... +..|-  .+.....+.+ 
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~--------~r~~~a~~~ga---~~~-~~~~~~~~~~~~~~~~~~   92 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSP--------RRLEVAKNCGA---DVT-LVVDPAKEEESSIIERIR   92 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHTTC---SEE-EECCTTTSCHHHHHHHHH
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHH--------HHHHHHHHcCC---cEE-Eeccccccccchhhhhhh
Confidence            456899998 58999999998888899999999987        66666665521   222 22232  2333333333 


Q ss_pred             ----cCCCEEEEecc
Q 023244           81 ----AGCTGVLHVAT   91 (285)
Q Consensus        81 ----~~~d~vih~a~   91 (285)
                          .++|+||.+++
T Consensus        93 ~~~g~g~D~vid~~g  107 (170)
T d1e3ja2          93 SAIGDLPNVTIDCSG  107 (170)
T ss_dssp             HHSSSCCSEEEECSC
T ss_pred             cccccCCceeeecCC
Confidence                24899999987

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.07  E-value=0.00043  Score=47.36  Aligned_cols=35  Identities=31%  Similarity=0.306  Sum_probs=31.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |+||.+++..|.+.|.+|+++.|+.
T Consensus        19 ~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~~   53 (122)
T d1h6va2          19 CPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRSI   53 (122)
T ss_dssp             CCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEech
Confidence            4578999999 9999999999999999999998764

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=97.07  E-value=0.00051  Score=46.72  Aligned_cols=36  Identities=25%  Similarity=0.195  Sum_probs=32.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ...++++|.|| |+||-.++..|.+.|.+|+++.+..
T Consensus        20 ~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          20 NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            34589999999 9999999999999999999999876

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.06  E-value=0.0014  Score=43.98  Aligned_cols=95  Identities=12%  Similarity=0.120  Sum_probs=61.6

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ..+|+|+|+|+ |-+|..-++.|++.|.+|++++...      . +....+..    ..++++...+..+.+     +++
T Consensus        10 l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~------~-~~~~~~~~----~~~i~~~~~~~~~~d-----l~~   72 (113)
T d1pjqa1          10 LRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTF------I-PQFTVWAN----EGMLTLVEGPFDETL-----LDS   72 (113)
T ss_dssp             CBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSC------C-HHHHHHHT----TTSCEEEESSCCGGG-----GTT
T ss_pred             eCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccC------C-hHHHHHHh----cCCceeeccCCCHHH-----hCC
Confidence            35789999999 9999999999999999999988755      1 22222222    136777776665432     456


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecc
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSS  133 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS  133 (285)
                      ++.|+.+..       +..     .    ...+.+.|++.+   .+|++..
T Consensus        73 ~~lv~~at~-------d~~-----~----n~~i~~~a~~~~---ilVNv~D  104 (113)
T d1pjqa1          73 CWLAIAATD-------DDT-----V----NQRVSDAAESRR---IFCNVVD  104 (113)
T ss_dssp             CSEEEECCS-------CHH-----H----HHHHHHHHHHTT---CEEEETT
T ss_pred             CcEEeecCC-------CHH-----H----HHHHHHHHHHcC---CEEEeCC
Confidence            788775422       221     1    125667777766   5666553

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=97.03  E-value=0.00047  Score=47.06  Aligned_cols=34  Identities=24%  Similarity=0.321  Sum_probs=32.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .++++|.|| |++|-+++..|.+.|.+|+++.+.+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~   63 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQP   63 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecc
Confidence            578999998 9999999999999999999999876

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=96.98  E-value=0.00084  Score=49.28  Aligned_cols=76  Identities=12%  Similarity=0.140  Sum_probs=49.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh----HHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG----FDA   78 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~----~~~   78 (285)
                      .+.+|+|+|| |.+|...++.+...|. +|+++++++        ++.+..+++..   . ..+...=.+..+    +.+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~--------~~~~~a~~lGa---~-~vi~~~~~~~~~~~~~i~~   94 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSP--------NRLKLAEEIGA---D-LTLNRRETSVEERRKAIMD   94 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCH--------HHHHHHHHTTC---S-EEEETTTSCHHHHHHHHHH
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccc--------ccccccccccc---e-EEEeccccchHHHHHHHHH
Confidence            3578999997 8999999999888897 799999987        56666666521   1 122211122222    222


Q ss_pred             Hhc--CCCEEEEeccc
Q 023244           79 AIA--GCTGVLHVATP   92 (285)
Q Consensus        79 ~~~--~~d~vih~a~~   92 (285)
                      +..  ++|+||.+.|.
T Consensus        95 ~~~~~g~Dvvid~vG~  110 (182)
T d1vj0a2          95 ITHGRGADFILEATGD  110 (182)
T ss_dssp             HTTTSCEEEEEECSSC
T ss_pred             hhCCCCceEEeecCCc
Confidence            222  48999998773

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=96.97  E-value=0.00047  Score=50.08  Aligned_cols=74  Identities=12%  Similarity=0.109  Sum_probs=50.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++.+|+|+|++|.+|...++.+...|. +|+++++++        ++...++++..   . ..+  |.++.+..++..+ 
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~--------~~~~~~~~~Ga---~-~~i--~~~~~~~~~~~~~~   92 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVRE--------EAVEAAKRAGA---D-YVI--NASMQDPLAEIRRI   92 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSH--------HHHHHHHHHTC---S-EEE--ETTTSCHHHHHHHH
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccch--------hhHHHHHHcCC---c-eee--ccCCcCHHHHHHHH
Confidence            456899999999999999998888884 888888876        56666655421   1 222  3333333333332 


Q ss_pred             ----CCCEEEEecc
Q 023244           82 ----GCTGVLHVAT   91 (285)
Q Consensus        82 ----~~d~vih~a~   91 (285)
                          .+|++|.+++
T Consensus        93 ~~~~~~d~vid~~g  106 (170)
T d1jvba2          93 TESKGVDAVIDLNN  106 (170)
T ss_dssp             TTTSCEEEEEESCC
T ss_pred             hhcccchhhhcccc
Confidence                3899999877

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=96.96  E-value=0.00068  Score=45.85  Aligned_cols=35  Identities=23%  Similarity=0.128  Sum_probs=32.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        20 ~p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~   54 (116)
T d1gesa2          20 LPERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD   54 (116)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence            3578999999 9999999999999999999999976

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.89  E-value=0.00073  Score=46.20  Aligned_cols=35  Identities=23%  Similarity=0.217  Sum_probs=31.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..|+|+|.|| |++|..++..|.+.|.+|+++.+.+
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence            3578999988 9999999999999999999998875

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=96.88  E-value=0.0024  Score=45.70  Aligned_cols=32  Identities=25%  Similarity=0.361  Sum_probs=26.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEe
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTV   36 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~   36 (285)
                      .+||+|.|++|-+|+.+++.+.+. +.++.+..
T Consensus         4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~   36 (162)
T d1diha1           4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAAL   36 (162)
T ss_dssp             BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence            578999999999999999998875 56765443

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.86  E-value=0.00037  Score=49.98  Aligned_cols=77  Identities=21%  Similarity=0.259  Sum_probs=58.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      .-+|+|.|| |-.|..-++.....|.+|++++.+.        +..+.++....  ..+.   .-..+.+.+.+.++++|
T Consensus        32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~--------~~l~~l~~~~~--~~~~---~~~~~~~~l~~~~~~aD   97 (168)
T d1pjca1          32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINV--------ERLSYLETLFG--SRVE---LLYSNSAEIETAVAEAD   97 (168)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHHHG--GGSE---EEECCHHHHHHHHHTCS
T ss_pred             CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcH--------HHHHHHHHhhc--ccce---eehhhhhhHHHhhccCc
Confidence            458999999 9999999999999999999999987        45554443311  1222   33456778899999999


Q ss_pred             EEEEecccCCC
Q 023244           85 GVLHVATPVDF   95 (285)
Q Consensus        85 ~vih~a~~~~~   95 (285)
                      +||.++-+...
T Consensus        98 ivI~aalipG~  108 (168)
T d1pjca1          98 LLIGAVLVPGR  108 (168)
T ss_dssp             EEEECCCCTTS
T ss_pred             EEEEeeecCCc
Confidence            99999876554

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0027  Score=45.93  Aligned_cols=75  Identities=17%  Similarity=0.137  Sum_probs=52.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++.+|+|+|+ |.+|...++.+...|. +|+++++++        ++....+++..   . ..+..+-.+.....+.++ 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~--------~rl~~a~~~Ga---~-~~~~~~~~~~~~~~~~~~~   92 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSA--------TRLSKAKEIGA---D-LVLQISKESPQEIARKVEG   92 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHTTC---S-EEEECSSCCHHHHHHHHHH
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCH--------HHHHHHHHhCC---c-ccccccccccccccccccc
Confidence            3568999987 9999999999988898 799999887        66666666521   1 223333344444444332 


Q ss_pred             ----CCCEEEEecc
Q 023244           82 ----GCTGVLHVAT   91 (285)
Q Consensus        82 ----~~d~vih~a~   91 (285)
                          ++|+||.+.+
T Consensus        93 ~~g~g~Dvvid~~G  106 (171)
T d1pl8a2          93 QLGCKPEVTIECTG  106 (171)
T ss_dssp             HHTSCCSEEEECSC
T ss_pred             cCCCCceEEEeccC
Confidence                4899999877

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.85  E-value=0.0021  Score=47.06  Aligned_cols=63  Identities=16%  Similarity=0.124  Sum_probs=48.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|.|.|. |-||+.+++.|..-|.+|++.+|++.              +            .+..-.++++++++++
T Consensus        41 ~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~--------------~------------~~~~~~~~l~ell~~s   93 (181)
T d1qp8a1          41 QGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK--------------E------------GPWRFTNSLEEALREA   93 (181)
T ss_dssp             TTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC--------------C------------SSSCCBSCSHHHHTTC
T ss_pred             cCceEEEecc-ccccccceeeeecccccccccccccc--------------c------------cceeeeechhhhhhcc
Confidence            4689999988 99999999999999999999998761              0            1111123578899999


Q ss_pred             CEEEEecccC
Q 023244           84 TGVLHVATPV   93 (285)
Q Consensus        84 d~vih~a~~~   93 (285)
                      |+|+.+....
T Consensus        94 Div~~~~pl~  103 (181)
T d1qp8a1          94 RAAVCALPLN  103 (181)
T ss_dssp             SEEEECCCCS
T ss_pred             chhhcccccc
Confidence            9998766543

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.82  E-value=0.0024  Score=46.50  Aligned_cols=73  Identities=11%  Similarity=0.199  Sum_probs=52.2

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCT   84 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d   84 (285)
                      +.+|-|+|- |.+|+.+++.|++.||+|++.+|++        ++...+.+........    ......+.+.+.+..+|
T Consensus         2 ~~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~--------~~~~~l~~~~~~~~~~----~~a~~~~~~~~~~~~~~   68 (176)
T d2pgda2           2 QADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTV--------SKVDDFLANEAKGTKV----LGAHSLEEMVSKLKKPR   68 (176)
T ss_dssp             CBSEEEECC-SHHHHHHHHHHHHTTCCEEEECSST--------HHHHHHHHTTTTTSSC----EECSSHHHHHHHBCSSC
T ss_pred             CCcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCH--------HHHHHHHHhccccccc----cchhhhhhhhhhhcccc
Confidence            468999988 9999999999999999999999988        5555544332111111    11345566777777888


Q ss_pred             EEEEec
Q 023244           85 GVLHVA   90 (285)
Q Consensus        85 ~vih~a   90 (285)
                      .++-+.
T Consensus        69 ~ii~~~   74 (176)
T d2pgda2          69 RIILLV   74 (176)
T ss_dssp             EEEECS
T ss_pred             eEEEec
Confidence            888654

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=96.82  E-value=0.00072  Score=45.80  Aligned_cols=34  Identities=24%  Similarity=0.343  Sum_probs=31.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .++|+|.|| |++|-+++..|.+.|.+|+++.|..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            578999999 9999999999999999999999876

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00098  Score=45.68  Aligned_cols=35  Identities=26%  Similarity=0.371  Sum_probs=32.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..|+++|.|| |++|-.++..|.+.|.+|+++.|+.
T Consensus        21 ~pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          21 LPGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence            3578999999 9999999999999999999999976

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.79  E-value=0.00094  Score=45.01  Aligned_cols=35  Identities=26%  Similarity=0.297  Sum_probs=32.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |++|-.++..|.+.|.+|+++.+.+
T Consensus        20 ~p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          20 LPQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence            3578999998 9999999999999999999999876

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.77  E-value=0.0007  Score=49.22  Aligned_cols=75  Identities=12%  Similarity=0.068  Sum_probs=49.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|+ |..++.++..|.+.+.+|+++.|+.        ++...+.+.-....++..+..|-.+       ...+
T Consensus        17 ~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~--------~~a~~l~~~~~~~~~~~~~~~~~~~-------~~~~   80 (171)
T d1p77a1          17 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTF--------SKTKELAERFQPYGNIQAVSMDSIP-------LQTY   80 (171)
T ss_dssp             TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSH--------HHHHHHHHHHGGGSCEEEEEGGGCC-------CSCC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccCceeeeccchH--------HHHHHHHHHHhhccccchhhhcccc-------cccc
Confidence            4689999988 7789999999998788999999987        3433332211111244444444221       3468


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+|||+.....
T Consensus        81 diiIN~tp~g~   91 (171)
T d1p77a1          81 DLVINATSAGL   91 (171)
T ss_dssp             SEEEECCCC--
T ss_pred             ceeeecccccc
Confidence            99999976543

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.74  E-value=0.00081  Score=45.89  Aligned_cols=33  Identities=36%  Similarity=0.576  Sum_probs=30.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++++|.|| |++|-.++..|.+.|.+|+++.|.+
T Consensus        33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence            68999998 9999999999999999999999876

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.73  E-value=0.0024  Score=45.65  Aligned_cols=58  Identities=17%  Similarity=0.170  Sum_probs=47.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|.|..+|+.|+..|.++|..|+......                                  ..+.+..+++
T Consensus        36 ~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t----------------------------------~~l~~~~~~A   81 (166)
T d1b0aa1          36 FGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT----------------------------------KNLRHHVENA   81 (166)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC----------------------------------SCHHHHHHHC
T ss_pred             ccceEEEEeccccccHHHHHHHHHhhcccccccccc----------------------------------chhHHHHhhh
Confidence            579999999999999999999999999998775544                                  1245556789


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+||..+|....
T Consensus        82 DivI~a~G~p~~   93 (166)
T d1b0aa1          82 DLLIVAVGKPGF   93 (166)
T ss_dssp             SEEEECSCCTTC
T ss_pred             hHhhhhccCccc
Confidence            999999987665

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=96.67  E-value=0.0011  Score=45.27  Aligned_cols=35  Identities=20%  Similarity=0.119  Sum_probs=32.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |++|-.++..|.+.|.+|+++.|++
T Consensus        24 ~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~   58 (123)
T d1dxla2          24 IPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFAS   58 (123)
T ss_dssp             CCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcc
Confidence            4579999999 9999999999999999999999977

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=96.67  E-value=0.018  Score=37.04  Aligned_cols=71  Identities=17%  Similarity=0.177  Sum_probs=48.8

Q ss_pred             CCCeEEEecCCchhH-HHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGGTGFIA-SWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ..|+|.+.|- |.+| +.||+.|.++|++|.+-++..       ......+.+.     ++.+..++-.+      .+++
T Consensus         7 ~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~-------~~~~~~L~~~-----Gi~v~~g~~~~------~i~~   67 (96)
T d1p3da1           7 RVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIAD-------GVVTQRLAQA-----GAKIYIGHAEE------HIEG   67 (96)
T ss_dssp             TCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCC-------SHHHHHHHHT-----TCEEEESCCGG------GGTT
T ss_pred             hCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCC-------ChhhhHHHHC-----CCeEEECCccc------cCCC
Confidence            4678999987 4455 778999999999999999864       1344444444     55555543321      2357


Q ss_pred             CCEEEEecccC
Q 023244           83 CTGVLHVATPV   93 (285)
Q Consensus        83 ~d~vih~a~~~   93 (285)
                      +|.||...|+.
T Consensus        68 ~d~vV~S~AI~   78 (96)
T d1p3da1          68 ASVVVVSSAIK   78 (96)
T ss_dssp             CSEEEECTTSC
T ss_pred             CCEEEECCCcC
Confidence            89999887753

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.66  E-value=0.00083  Score=47.76  Aligned_cols=33  Identities=33%  Similarity=0.335  Sum_probs=29.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||.|.|. |.+|+.+++.|+++|++|++.++++
T Consensus         1 MkIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~   33 (152)
T d1i36a2           1 LRVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGR   33 (152)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCEEEECCTTC
T ss_pred             CEEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCch
Confidence            57999976 9999999999999999999888766

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=96.63  E-value=0.0027  Score=46.07  Aligned_cols=76  Identities=17%  Similarity=0.100  Sum_probs=55.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecC----------------
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD----------------   69 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D----------------   69 (285)
                      -+|+|.|| |-.|..-++-....|..|++++.+.        ...+.++++..     .++..+                
T Consensus        30 a~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~--------~~~~~l~~l~~-----~~i~~~~~~~~~~~~~~gyA~~   95 (183)
T d1l7da1          30 ARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRA--------ATKEQVESLGG-----KFITVDDEAMKTAETAGGYAKE   95 (183)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCS--------TTHHHHHHTTC-----EECCC-----------------
T ss_pred             cEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccH--------HHHHHHHHhhc-----ceEEEeccccccccccccchhh
Confidence            48999999 9999999999999999999999988        55666655521     121111                


Q ss_pred             ------CCChhhHHHHhcCCCEEEEecccCCC
Q 023244           70 ------LSHPDGFDAAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        70 ------l~d~~~~~~~~~~~d~vih~a~~~~~   95 (285)
                            ..+.+.+.+.++++|+||-.+-....
T Consensus        96 ~s~~~~~~~~~~l~~~l~~aDlVI~talipG~  127 (183)
T d1l7da1          96 MGEEFRKKQAEAVLKELVKTDIAITTALIPGK  127 (183)
T ss_dssp             ------CCHHHHHHHHHTTCSEEEECCCCTTS
T ss_pred             cCHHHHHHHHHHHHHHHHhhhhheeeeecCCc
Confidence                  12235567777889999998876554

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=96.63  E-value=0.0014  Score=44.84  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=32.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |+||-+++..|.+.|.+|+++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            4579999999 9999999999999999999999876

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=96.62  E-value=0.0092  Score=39.95  Aligned_cols=33  Identities=15%  Similarity=0.372  Sum_probs=28.7

Q ss_pred             CeEEEecCC---chhHHHHHHHHHHcCCeEEEEecC
Q 023244            6 GRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      |+|.|.|+|   +-.|..+++.|++.||+|+.+..+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~   37 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPN   37 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTT
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccc
Confidence            689999998   779999999999999998877543

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=96.62  E-value=0.0013  Score=45.49  Aligned_cols=35  Identities=23%  Similarity=0.348  Sum_probs=32.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..++|+|.|| |++|-+++..|.+.|.+|+++.+.+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~   68 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA   68 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence            3578999998 9999999999999999999999876

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.0045  Score=44.47  Aligned_cols=58  Identities=14%  Similarity=0.104  Sum_probs=46.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|+|.|.|..+|+.|+..|+++|..|+.+....                                  ..+.+..+++
T Consensus        38 ~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t----------------------------------~~l~~~~~~a   83 (170)
T d1a4ia1          38 AGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT----------------------------------AHLDEEVNKG   83 (170)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC----------------------------------SSHHHHHTTC
T ss_pred             ccceEEEEecCCccchHHHHHHHhccCceEEEeccc----------------------------------ccHHHHHhhc
Confidence            579999999999999999999999999999877655                                  1134455678


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |++|..+|....
T Consensus        84 Divi~a~G~~~~   95 (170)
T d1a4ia1          84 DILVVATGQPEM   95 (170)
T ss_dssp             SEEEECCCCTTC
T ss_pred             cchhhccccccc
Confidence            888888876555

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.57  E-value=0.0015  Score=47.26  Aligned_cols=35  Identities=20%  Similarity=0.369  Sum_probs=31.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      ++|+|+|.|+ |..|+.++..|.+.|. +|.++.|+.
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~   51 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNV   51 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccH
Confidence            4678999998 9999999999999996 788888987

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.0014  Score=48.54  Aligned_cols=34  Identities=24%  Similarity=0.326  Sum_probs=32.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      -|+|.|.|| |.+|+.++..++..|++|+++++++
T Consensus         4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (192)
T d1f0ya2           4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTE   37 (192)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence            479999999 9999999999999999999999986

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.51  E-value=0.0042  Score=44.53  Aligned_cols=44  Identities=16%  Similarity=0.170  Sum_probs=36.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNL   56 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~   56 (285)
                      ++.+|+|.|+ |.+|...++.+...|.+|+++++++        ++.+..+++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~--------~~~~~a~~~   70 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDD--------AKLELARKL   70 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCH--------HHHHHHHHT
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchh--------hHHHhhhcc
Confidence            4578999987 9999998888888899999999887        566666655

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=96.48  E-value=0.013  Score=37.16  Aligned_cols=70  Identities=17%  Similarity=0.200  Sum_probs=47.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCCCE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGCTG   85 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~   85 (285)
                      |+|-++|-.|-==+.||+.|.++|++|.+-++..       .+....|+..     +++++.+  .+++.    ++++|.
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~-------~~~t~~L~~~-----Gi~i~~g--h~~~~----i~~~d~   63 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEE-------TERTAYLRKL-----GIPIFVP--HSADN----WYDPDL   63 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSC-------CHHHHHHHHT-----TCCEESS--CCTTS----CCCCSE
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCC-------ChhHHHHHHC-----CCeEEee--ecccc----cCCCCE
Confidence            6788988744333478999999999999999875       2444456555     5555443  12221    257899


Q ss_pred             EEEecccC
Q 023244           86 VLHVATPV   93 (285)
Q Consensus        86 vih~a~~~   93 (285)
                      ||...|+.
T Consensus        64 vV~SsAI~   71 (89)
T d1j6ua1          64 VIKTPAVR   71 (89)
T ss_dssp             EEECTTCC
T ss_pred             EEEecCcC
Confidence            99888864

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.38  E-value=0.0023  Score=46.50  Aligned_cols=74  Identities=15%  Similarity=0.017  Sum_probs=49.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~   79 (285)
                      ++.+|+|.|+ |.+|...++.+...|. +|+++++++        ++....+++..    .+.  .|..+.   +.+.++
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~--------~r~~~a~~lGa----~~~--i~~~~~~~~~~v~~~   91 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRP--------ICVEAAKFYGA----TDI--LNYKNGHIEDQVMKL   91 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCH--------HHHHHHHHHTC----SEE--ECGGGSCHHHHHHHH
T ss_pred             CCCEEEEEcC-Ccchhhhhhhhhcccccccccccchh--------hhHHHHHhhCc----ccc--ccccchhHHHHHHHH
Confidence            4568999987 9999999988888886 688888876        55555555421    122  233332   334444


Q ss_pred             hc--CCCEEEEeccc
Q 023244           80 IA--GCTGVLHVATP   92 (285)
Q Consensus        80 ~~--~~d~vih~a~~   92 (285)
                      ..  ++|+||.+++.
T Consensus        92 t~g~G~D~vid~~g~  106 (174)
T d1jqba2          92 TNGKGVDRVIMAGGG  106 (174)
T ss_dssp             TTTSCEEEEEECSSC
T ss_pred             hhccCcceEEEccCC
Confidence            43  38999999873

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=96.36  E-value=0.0026  Score=43.07  Aligned_cols=35  Identities=26%  Similarity=0.162  Sum_probs=32.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +.++++|.|| |++|..++..|.+.|.+|+++.|.+
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~   55 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE   55 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence            3578999998 9999999999999999999999876

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.35  E-value=0.005  Score=44.59  Aligned_cols=77  Identities=14%  Similarity=0.100  Sum_probs=49.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh-hhHHHHh-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP-DGFDAAI-   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~-   80 (285)
                      ++.+|+|.|+ |.+|...+..+...| .+|+++++++        ++.....+...   ...+...|-.+. ....+.. 
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~--------~k~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~   95 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINK--------DKFAKAKEVGA---TECVNPQDYKKPIQEVLTEMS   95 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHT
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcH--------HHHHHHHHhCC---eeEEecCCchhHHHHHHHHHh
Confidence            4568999999 568999999998887 5888888887        66666666521   111112232222 2222222 


Q ss_pred             -cCCCEEEEeccc
Q 023244           81 -AGCTGVLHVATP   92 (285)
Q Consensus        81 -~~~d~vih~a~~   92 (285)
                       .++|++|.+.+.
T Consensus        96 ~~G~D~vid~~G~  108 (176)
T d2jhfa2          96 NGGVDFSFEVIGR  108 (176)
T ss_dssp             TSCBSEEEECSCC
T ss_pred             cCCCCEEEecCCc
Confidence             258999998773

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.33  E-value=0.0025  Score=46.82  Aligned_cols=98  Identities=12%  Similarity=0.073  Sum_probs=53.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEE-ecCCCCccccCccchhhh-hcCCCCCCCEEEEecCCCChh---hHHHHh
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTT-VRSELDPEHRNSKDLSFL-KNLPGASERLRIFHADLSHPD---GFDAAI   80 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~---~~~~~~   80 (285)
                      .+|||+||+|.+|+..++.....|.++++. +++.        ++...+ .++..   .   ...|.++.+   .+.++.
T Consensus        32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~--------e~~~~l~~~~ga---d---~vi~~~~~~~~~~~~~~~   97 (187)
T d1vj1a2          32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQ--------EKCLFLTSELGF---D---AAVNYKTGNVAEQLREAC   97 (187)
T ss_dssp             CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSH--------HHHHHHHHHSCC---S---EEEETTSSCHHHHHHHHC
T ss_pred             CEEEEECCCchhhHHHHHHHHHcCCcceecccchH--------HHHhhhhhcccc---e---EEeeccchhHHHHHHHHh
Confidence            579999999999999998887788765554 4443        333333 23321   1   123444433   233332


Q ss_pred             -cCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccceee
Q 023244           81 -AGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNAAV  137 (285)
Q Consensus        81 -~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~~~  137 (285)
                       +++|+|+.+.|-          ..++       ..++.++.   -.+++.+++.+.+
T Consensus        98 ~~GvDvv~D~vGg----------~~~~-------~~~~~l~~---~G~iv~~G~~s~~  135 (187)
T d1vj1a2          98 PGGVDVYFDNVGG----------DISN-------TVISQMNE---NSHIILCGQISQY  135 (187)
T ss_dssp             TTCEEEEEESSCH----------HHHH-------HHHTTEEE---EEEEEEC------
T ss_pred             ccCceEEEecCCc----------hhHH-------HHhhhccc---cccEEEecccccc
Confidence             248999988761          2111       22333333   3589998876654

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.31  E-value=0.0013  Score=47.96  Aligned_cols=33  Identities=24%  Similarity=0.370  Sum_probs=30.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||-|+|- |.+|..+++.|++.||+|++.+|++
T Consensus         2 MkIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~   34 (178)
T d1pgja2           2 MDVGVVGL-GVMGANLALNIAEKGFKVAVFNRTY   34 (178)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CEEEEEee-hHHHHHHHHHHHHCCCeEEEEECCH
Confidence            57999977 9999999999999999999999987

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.17  E-value=0.0022  Score=47.16  Aligned_cols=34  Identities=15%  Similarity=0.219  Sum_probs=31.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      -++|.|.|| |.+|+.++..++..|++|+++++++
T Consensus         4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~   37 (186)
T d1wdka3           4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINE   37 (186)
T ss_dssp             CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence            368999999 9999999999999999999999986

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=96.17  E-value=0.0026  Score=46.02  Aligned_cols=113  Identities=16%  Similarity=0.113  Sum_probs=63.4

Q ss_pred             CCeEEEecCCchhHHH--HHHHHHHc----CCeEEEEecCCCCccccCccchhh----hhcC-CCCCCCEEEEecCCCCh
Q 023244            5 KGRVCVTGGTGFIASW--LIMRLLDH----GYSVTTTVRSELDPEHRNSKDLSF----LKNL-PGASERLRIFHADLSHP   73 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~Dl~d~   73 (285)
                      .|||.|.|| |.+|..  ++..|+..    +.++.+++.++        ++.+.    +... .......+     +...
T Consensus         2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~--------~~~~~~~~~~~~~~~~~~~~~~-----i~~~   67 (171)
T d1obba1           2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDE--------ERLDAILTIAKKYVEEVGADLK-----FEKT   67 (171)
T ss_dssp             CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCH--------HHHHHHHHHHHHHHHHTTCCCE-----EEEE
T ss_pred             CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCc--------hHHHHHHHHHHHHHHhcCCCeE-----EEEe
Confidence            579999998 888865  34444432    35899999976        22211    1110 00011222     2222


Q ss_pred             hhHHHHhcCCCEEEEecccCCCCCCChHH-------------------------HHHHHHHHHHHHHHHHHHhcCCccEE
Q 023244           74 DGFDAAIAGCTGVLHVATPVDFEDKEPEE-------------------------VITQRAINGTLGILKSCLKSGTVKRV  128 (285)
Q Consensus        74 ~~~~~~~~~~d~vih~a~~~~~~~~~~~~-------------------------~~~~~n~~~~~~l~~~~~~~~~~~~~  128 (285)
                      .+..+.++++|+|+..++...........                         .....|+.-.+.+++.+++..+-.-+
T Consensus        68 td~~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~~  147 (171)
T d1obba1          68 MNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY  147 (171)
T ss_dssp             SCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred             CChhhcccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeEE
Confidence            34667788999999998764431000000                         01234788888899999988733344


Q ss_pred             EEe
Q 023244          129 VYT  131 (285)
Q Consensus       129 v~~  131 (285)
                      |.+
T Consensus       148 i~~  150 (171)
T d1obba1         148 LQA  150 (171)
T ss_dssp             EEC
T ss_pred             EEE
Confidence            433

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.16  E-value=0.0019  Score=45.81  Aligned_cols=33  Identities=27%  Similarity=0.404  Sum_probs=30.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~   39 (285)
                      |||.+.|+ |.+|+++++.|++.| ++|++.+|++
T Consensus         1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~   34 (152)
T d1yqga2           1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGA   34 (152)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred             CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCCh
Confidence            58999988 999999999998877 8999999987

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.15  E-value=0.003  Score=38.93  Aligned_cols=34  Identities=24%  Similarity=0.211  Sum_probs=31.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|.|.|+ |.+|+-++..-...|+++.+++-++
T Consensus         1 ~k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~   34 (78)
T d3etja2           1 MKQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDA   34 (78)
T ss_dssp             CEEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTS
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCC
Confidence            478999998 9999999999999999999999766

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=96.12  E-value=0.0014  Score=48.32  Aligned_cols=35  Identities=11%  Similarity=0.150  Sum_probs=29.4

Q ss_pred             CCeEEE-ecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCV-TGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilV-tGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +.+++| +||+|.+|...++-....|.+|++++|+.
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~   64 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDR   64 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecc
Confidence            345666 69999999999888877899999999876

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.11  E-value=0.0097  Score=42.69  Aligned_cols=81  Identities=12%  Similarity=0.085  Sum_probs=52.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCC--CChhhHHHHhc
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADL--SHPDGFDAAIA   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~   81 (285)
                      .+|+++|.|-|.-+|+.|+..|+++|..|+....+..       ..........    -......|+  ...+.+.+...
T Consensus        28 ~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~lk~~~~   96 (171)
T d1edza1          28 YGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNI-------QKFTRGESLK----LNKHHVEDLGEYSEDLLKKCSL   96 (171)
T ss_dssp             TTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEE-------EEEESCCCSS----CCCCEEEEEEECCHHHHHHHHH
T ss_pred             CCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccc-------ccccccccee----eeeeccccccccchhHHhhccc
Confidence            5799999999999999999999999999987765431       0000000000    000011222  23455777778


Q ss_pred             CCCEEEEecccCCC
Q 023244           82 GCTGVLHVATPVDF   95 (285)
Q Consensus        82 ~~d~vih~a~~~~~   95 (285)
                      .+|+||..+|..++
T Consensus        97 ~aDIvIsavG~p~~  110 (171)
T d1edza1          97 DSDVVITGVPSENY  110 (171)
T ss_dssp             HCSEEEECCCCTTC
T ss_pred             cCCEEEEccCCCcc
Confidence            89999998887654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=96.10  E-value=0.0041  Score=45.27  Aligned_cols=35  Identities=20%  Similarity=0.158  Sum_probs=32.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|+|+|| |..|-..+..|+++||+|+++.+.+
T Consensus        42 ~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          42 QKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            5689999999 9999999999999999999999876

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.09  E-value=0.0069  Score=43.36  Aligned_cols=73  Identities=14%  Similarity=0.138  Sum_probs=48.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~   80 (285)
                      ++.+|+|.|+ |.+|...++.+...|.+|+++++++        ++....+++.     +..+ .|..+.   +.+.+.-
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~--------~r~~~~k~~G-----a~~~-~~~~~~~~~~~~~~~~   91 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGD--------EKLELAKELG-----ADLV-VNPLKEDAAKFMKEKV   91 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCH--------HHHHHHHHTT-----CSEE-ECTTTSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCH--------HHhhhhhhcC-----ccee-cccccchhhhhccccc
Confidence            4578999976 9999998888888899999999877        6666666652     2222 222222   3344445


Q ss_pred             cCCCEEEEecc
Q 023244           81 AGCTGVLHVAT   91 (285)
Q Consensus        81 ~~~d~vih~a~   91 (285)
                      ++.+.+|-+++
T Consensus        92 ~~~~~~v~~~~  102 (168)
T d1rjwa2          92 GGVHAAVVTAV  102 (168)
T ss_dssp             SSEEEEEESSC
T ss_pred             CCCceEEeecC
Confidence            56666665543

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.08  E-value=0.0032  Score=50.36  Aligned_cols=34  Identities=18%  Similarity=0.355  Sum_probs=31.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|+|+|+|| |.-|...|..|+++|++|+++-++.
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~   35 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD   35 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence            689999999 9999999999999999999998766

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.08  E-value=0.0087  Score=43.29  Aligned_cols=75  Identities=13%  Similarity=0.052  Sum_probs=48.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC--hhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~   80 (285)
                      ++.+|+|+|+ |.+|...++.+...|. .|++.++++        ++....+++..    -..+...-.|  ........
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~--------~r~~~a~~~Ga----~~~i~~~~~~~~~~~~~~~~   94 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDING--------EKFPKAKALGA----TDCLNPRELDKPVQDVITEL   94 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC----SEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccch--------HHHHHHHHhCC----CcccCCccchhhhhhhHhhh
Confidence            4578999986 9999999999988897 577777776        56666666521    1222221111  12222222


Q ss_pred             --cCCCEEEEecc
Q 023244           81 --AGCTGVLHVAT   91 (285)
Q Consensus        81 --~~~d~vih~a~   91 (285)
                        .++|+||.+.|
T Consensus        95 ~~~G~d~vie~~G  107 (174)
T d1e3ia2          95 TAGGVDYSLDCAG  107 (174)
T ss_dssp             HTSCBSEEEESSC
T ss_pred             hcCCCcEEEEecc
Confidence              35899999987

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.06  E-value=0.0046  Score=44.77  Aligned_cols=73  Identities=15%  Similarity=0.130  Sum_probs=46.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEE-EecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhh---HHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTT-TVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDG---FDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~   79 (285)
                      ++.+|+|.|+ |.+|...++.+...|.++++ .++++        ++.+..+++.    -.+++  |..+.+.   +.++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~--------~k~~~a~~~G----a~~~i--~~~~~~~~~~i~~~   92 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE--------SRLELAKQLG----ATHVI--NSKTQDPVAAIKEI   92 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH--------HHHHHHHHHT----CSEEE--ETTTSCHHHHHHHH
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHH--------HHHHHHHHcC----CeEEE--eCCCcCHHHHHHHH
Confidence            4568999998 99999999888888876554 45554        5555555552    11233  3444332   3333


Q ss_pred             hc-CCCEEEEecc
Q 023244           80 IA-GCTGVLHVAT   91 (285)
Q Consensus        80 ~~-~~d~vih~a~   91 (285)
                      -. ++|+||.+.+
T Consensus        93 t~gg~D~vid~~G  105 (174)
T d1f8fa2          93 TDGGVNFALESTG  105 (174)
T ss_dssp             TTSCEEEEEECSC
T ss_pred             cCCCCcEEEEcCC
Confidence            22 3899999877

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.06  E-value=0.0027  Score=46.68  Aligned_cols=35  Identities=20%  Similarity=0.235  Sum_probs=31.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      .+|||+|+|| |..|-..+..|.++|+ +|+++.|+.
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            4689999999 9999999999999998 599998876

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.05  E-value=0.0058  Score=44.17  Aligned_cols=75  Identities=12%  Similarity=0.055  Sum_probs=45.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEec-CC-CChhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-DL-SHPDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl-~d~~~~~~~~   80 (285)
                      ++.+|+|.|+ |.+|...++.+...|. .|+++++++        ++.+..+++..    -..+.. +- .+.....+..
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~--------~k~~~ak~lGa----~~~i~~~~~~~~~~~~~~~~   94 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINK--------DKFARAKEFGA----TECINPQDFSKPIQEVLIEM   94 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG--------GGHHHHHHHTC----SEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccH--------HHHHHHHHhCC----cEEEeCCchhhHHHHHHHHH
Confidence            4568999998 5689999888888886 566666655        55555555521    112211 11 1112222222


Q ss_pred             --cCCCEEEEecc
Q 023244           81 --AGCTGVLHVAT   91 (285)
Q Consensus        81 --~~~d~vih~a~   91 (285)
                        .++|+||.+.|
T Consensus        95 ~~~g~D~vid~~G  107 (176)
T d2fzwa2          95 TDGGVDYSFECIG  107 (176)
T ss_dssp             TTSCBSEEEECSC
T ss_pred             cCCCCcEeeecCC
Confidence              24899999877

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=95.97  E-value=0.0033  Score=48.92  Aligned_cols=31  Identities=23%  Similarity=0.270  Sum_probs=29.5

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|| |..|..++.+|+++|++|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            999999 9999999999999999999999865

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=95.90  E-value=0.014  Score=41.94  Aligned_cols=34  Identities=12%  Similarity=0.132  Sum_probs=26.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~   39 (285)
                      +.||.|.|. |++|+..++.|.+. +.+++++....
T Consensus         3 kirvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~   37 (170)
T d1f06a1           3 NIRVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRR   37 (170)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESS
T ss_pred             cceEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecc
Confidence            468999986 99999999999875 56777665433

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.89  E-value=0.0084  Score=44.27  Aligned_cols=65  Identities=15%  Similarity=-0.007  Sum_probs=47.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|.|.|- |.||+.+++.|..-|.+|++.++..        +.....               +....+.+.++++++
T Consensus        42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~--------~~~~~~---------------~~~~~~~l~~~l~~s   97 (197)
T d1j4aa1          42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFR--------NPELEK---------------KGYYVDSLDDLYKQA   97 (197)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC--------CHHHHH---------------TTCBCSCHHHHHHHC
T ss_pred             cCCeEEEecc-cccchhHHHhHhhhcccccccCccc--------cccccc---------------ceeeecccccccccc
Confidence            4689999988 9999999999998899999988765        111110               111234578888889


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+|+.+...
T Consensus        98 Dii~~~~pl  106 (197)
T d1j4aa1          98 DVISLHVPD  106 (197)
T ss_dssp             SEEEECSCC
T ss_pred             ccccccCCc
Confidence            988876654

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=95.81  E-value=0.003  Score=46.67  Aligned_cols=69  Identities=12%  Similarity=0.018  Sum_probs=48.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|++.|.|. |-||+.+++.|..-|.+|++.++...        .... ..            .++...++++++++.+
T Consensus        48 ~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~--------~~~~-~~------------~~~~~~~~l~~ll~~s  105 (193)
T d1mx3a1          48 RGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLS--------DGVE-RA------------LGLQRVSTLQDLLFHS  105 (193)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSC--------TTHH-HH------------HTCEECSSHHHHHHHC
T ss_pred             eCceEEEecc-ccccccceeeeeccccceeeccCccc--------ccch-hh------------hccccccchhhccccC
Confidence            4689999988 99999999999988999999988651        1100 00            1122234577888889


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+|+.+.....
T Consensus       106 D~i~~~~plt~  116 (193)
T d1mx3a1         106 DCVTLHCGLNE  116 (193)
T ss_dssp             SEEEECCCCCT
T ss_pred             CEEEEeecccc
Confidence            98776665433

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=95.74  E-value=0.011  Score=42.74  Aligned_cols=76  Identities=12%  Similarity=0.004  Sum_probs=50.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC-hhhHHHHh-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH-PDGFDAAI-   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~-   80 (285)
                      ++.+|+|+|+ |.+|...++.+...|. +|+++++++        ++.+..+++..   ...+-.-|-.+ .+.+.+.. 
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~--------~kl~~Ak~~GA---~~~in~~~~~~~~~~~~~~~~   96 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNK--------DKFEKAMAVGA---TECISPKDSTKPISEVLSEMT   96 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcH--------HHHHHHHhcCC---cEEECccccchHHHHHHHHhc
Confidence            3568999987 9999999999998884 799999987        66666655521   11111122222 22333333 


Q ss_pred             -cCCCEEEEecc
Q 023244           81 -AGCTGVLHVAT   91 (285)
Q Consensus        81 -~~~d~vih~a~   91 (285)
                       .++|++|.+.+
T Consensus        97 g~G~d~vi~~~g  108 (176)
T d1d1ta2          97 GNNVGYTFEVIG  108 (176)
T ss_dssp             TSCCCEEEECSC
T ss_pred             cccceEEEEeCC
Confidence             35899998876

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=95.71  E-value=0.012  Score=43.13  Aligned_cols=67  Identities=10%  Similarity=-0.074  Sum_probs=48.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+++|.|.|. |.||+.+++.|..-|.+|++.++...              ..  . ...       ...+.++++++.+
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~--------------~~--~-~~~-------~~~~~l~ell~~s   97 (188)
T d1sc6a1          43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENK--------------LP--L-GNA-------TQVQHLSDLLNMS   97 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC--------------CC--C-TTC-------EECSCHHHHHHHC
T ss_pred             cceEEEEeec-ccchhhhhhhcccccceEeecccccc--------------ch--h-hhh-------hhhhhHHHHHhhc
Confidence            4678999977 99999999999988999999988651              00  0 011       1113578888899


Q ss_pred             CEEEEecccCCC
Q 023244           84 TGVLHVATPVDF   95 (285)
Q Consensus        84 d~vih~a~~~~~   95 (285)
                      |+|+-++.....
T Consensus        98 Dii~i~~plt~~  109 (188)
T d1sc6a1          98 DVVSLHVPENPS  109 (188)
T ss_dssp             SEEEECCCSSTT
T ss_pred             cceeecccCCcc
Confidence            998877665443

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.69  E-value=0.024  Score=39.14  Aligned_cols=35  Identities=23%  Similarity=0.342  Sum_probs=30.4

Q ss_pred             CCeEEEecCC---chhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .|+|.|.|||   +-.|..+++.|.+.||+|+.+..+.
T Consensus        19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~   56 (139)
T d2d59a1          19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY   56 (139)
T ss_dssp             CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcc
Confidence            4789999998   7899999999999999988776543

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.67  E-value=0.0084  Score=42.39  Aligned_cols=35  Identities=29%  Similarity=0.278  Sum_probs=29.2

Q ss_pred             CCeEEEe-cCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVT-GGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVt-GatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++.++|. .+.||+|..+++.|++.|.+|+++.+.+
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~   74 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH   74 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCC
Confidence            4566665 2449999999999999999999999876

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=95.66  E-value=0.0057  Score=44.05  Aligned_cols=34  Identities=21%  Similarity=0.086  Sum_probs=29.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~   39 (285)
                      +|||+|.|| |++|-.++..|.+.+.  +|+++.+++
T Consensus         2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            689999999 9999999999998875  788887654

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=95.65  E-value=0.00097  Score=48.13  Aligned_cols=115  Identities=16%  Similarity=0.128  Sum_probs=61.6

Q ss_pred             CCCeEEEecCCchhHHH-HHHHHHHc-----CCeEEEEecCCCCccccCccchhh----hhcCCC-CCCCEEEEecCCCC
Q 023244            4 GKGRVCVTGGTGFIASW-LIMRLLDH-----GYSVTTTVRSELDPEHRNSKDLSF----LKNLPG-ASERLRIFHADLSH   72 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~-l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~Dl~d   72 (285)
                      +..||.|.|| |.+|.. ++..|+..     +.++++++.++        ++...    +..... .........     
T Consensus         2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~--------~~~~~~~~~~~~~~~~~~~~~~~~~-----   67 (167)
T d1u8xx1           2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDK--------ERQDRIAGACDVFIREKAPDIEFAA-----   67 (167)
T ss_dssp             CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCH--------HHHHHHHHHHHHHHHHHCTTSEEEE-----
T ss_pred             CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCCh--------hHHHHHHHHHHHHHHHhCCCcceEe-----
Confidence            3468999999 445544 44555542     13788888876        22221    111000 011112111     


Q ss_pred             hhhHHHHhcCCCEEEEecccCCCCCCChHHH-------------------HHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           73 PDGFDAAIAGCTGVLHVATPVDFEDKEPEEV-------------------ITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~-------------------~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      ..+..+.++++|+||..++..........+.                   ....|+.-.+.+++.+++.++-.-++.+|
T Consensus        68 ~~d~~eal~~AD~Vvitag~~~~~g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~T  146 (167)
T d1u8xx1          68 TTDPEEAFTDVDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYS  146 (167)
T ss_dssp             ESCHHHHHSSCSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred             cCChhhccCCCCEEEECCCcCCCCceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeC
Confidence            1246677889999999998755421111111                   11235666777888888887334444433

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.54  E-value=0.016  Score=41.65  Aligned_cols=75  Identities=13%  Similarity=0.054  Sum_probs=47.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhc-
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIA-   81 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   81 (285)
                      ++.+|+|.|+ |.+|...++.+...|. .|++.++++        ++....++..    ..+++..+=.+.+...+... 
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~--------~k~~~~~~~g----a~~~i~~~~~~~~~~~~~~~~   98 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKE--------EKLKLAERLG----ADHVVDARRDPVKQVMELTRG   98 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSH--------HHHHHHHHTT----CSEEEETTSCHHHHHHHHTTT
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchh--------HHHHHHhhcc----cceeecCcccHHHHHHHhhCC
Confidence            4568999987 9999999988877775 566667766        5666665552    12333322122233333332 


Q ss_pred             -CCCEEEEecc
Q 023244           82 -GCTGVLHVAT   91 (285)
Q Consensus        82 -~~d~vih~a~   91 (285)
                       ++|+||.+++
T Consensus        99 ~g~d~vid~~g  109 (172)
T d1h2ba2          99 RGVNVAMDFVG  109 (172)
T ss_dssp             CCEEEEEESSC
T ss_pred             CCceEEEEecC
Confidence             4899999887

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=95.52  E-value=0.0078  Score=46.23  Aligned_cols=34  Identities=29%  Similarity=0.358  Sum_probs=31.6

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+||+|+|| |..|..++..|.++|++|+++.|++
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            478999999 9999999999999999999999865

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.51  E-value=0.044  Score=36.46  Aligned_cols=73  Identities=11%  Similarity=0.115  Sum_probs=48.6

Q ss_pred             CCCCeEEEecCCc----------hhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC
Q 023244            3 EGKGRVCVTGGTG----------FIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH   72 (285)
Q Consensus         3 ~~~k~ilVtGatG----------~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d   72 (285)
                      +..|+|||.|+..          |-+.+.++.|.+.|++++.+..++++.+....              -..-+...-..
T Consensus         2 t~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d--------------~aD~lYfeplt   67 (121)
T d1a9xa4           2 TDREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYD--------------TSDRLYFEPVT   67 (121)
T ss_dssp             SSSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTT--------------SSSEEECCCCS
T ss_pred             CCCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChh--------------hcCceEEccCC
Confidence            3468999999943          78999999999999999999998832222211              11112233345


Q ss_pred             hhhHHHHhc--CCCEEEEe
Q 023244           73 PDGFDAAIA--GCTGVLHV   89 (285)
Q Consensus        73 ~~~~~~~~~--~~d~vih~   89 (285)
                      .+.+.++++  ++|.|+-.
T Consensus        68 ~e~v~~Ii~~E~p~~ii~~   86 (121)
T d1a9xa4          68 LEDVLEIVRIEKPKGVIVQ   86 (121)
T ss_dssp             HHHHHHHHHHHCCSEEECS
T ss_pred             HHHHHHHHHHhCCCEEEee
Confidence            566777664  68888743

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.50  E-value=0.018  Score=41.46  Aligned_cols=75  Identities=11%  Similarity=-0.022  Sum_probs=48.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCC--hhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSH--PDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d--~~~~~~~~   80 (285)
                      ++.+|+|.|+ |.+|...++.+...|. +|++++++.        ++.+..+++..    -..+...-.|  .+...+..
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~--------~kl~~a~~lGa----~~~i~~~~~d~~~~~~~~~~   93 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHK--------DKFPKAIELGA----TECLNPKDYDKPIYEVICEK   93 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCG--------GGHHHHHHTTC----SEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChH--------HHHHHHHHcCC----cEEEcCCCchhHHHHHHHHh
Confidence            4568999997 9999999999988886 688888877        66666666521    1222211112  12232222


Q ss_pred             c--CCCEEEEecc
Q 023244           81 A--GCTGVLHVAT   91 (285)
Q Consensus        81 ~--~~d~vih~a~   91 (285)
                      .  ++|++|.+.+
T Consensus        94 ~~~G~d~vid~~g  106 (174)
T d1p0fa2          94 TNGGVDYAVECAG  106 (174)
T ss_dssp             TTSCBSEEEECSC
T ss_pred             cCCCCcEEEEcCC
Confidence            2  4899998876

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.48  E-value=0.0066  Score=42.71  Aligned_cols=34  Identities=21%  Similarity=0.358  Sum_probs=31.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      .+|+|||+|| |.+|..-++.|++.|.+|+++...
T Consensus        12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1          12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            5789999999 999999999999999999999653

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=95.38  E-value=0.0075  Score=47.28  Aligned_cols=34  Identities=29%  Similarity=0.290  Sum_probs=31.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .|||+|+|| |.-|-..+.+|++.|++|+++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            378999999 9999999999999999999998764

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=95.37  E-value=0.0054  Score=45.30  Aligned_cols=32  Identities=22%  Similarity=0.226  Sum_probs=27.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |||.|.| .||+|..++..| ++|++|++++-++
T Consensus         1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~   32 (196)
T d1dlja2           1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILP   32 (196)
T ss_dssp             CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCH
T ss_pred             CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCH
Confidence            5899997 599999999766 4699999999876

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=95.37  E-value=0.011  Score=44.76  Aligned_cols=35  Identities=31%  Similarity=0.386  Sum_probs=32.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..|+|+|+|| |..|-..+..|+++|++|+++.++.
T Consensus        48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            4689999999 9999999999999999999998866

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=95.36  E-value=0.1  Score=39.59  Aligned_cols=33  Identities=21%  Similarity=0.135  Sum_probs=28.5

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (285)
                      .++|+|.|+ |.+|++++..|+..|. ++++++.+
T Consensus        30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            368999998 8899999999999997 77787754

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.32  E-value=0.03  Score=41.14  Aligned_cols=74  Identities=14%  Similarity=0.010  Sum_probs=49.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh---hhHHHH
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP---DGFDAA   79 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~   79 (285)
                      .+.+|+|.|+ |.+|...+..+...|. .|+++++++        ++....++.     ....+ .|-.+.   +.+.++
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~--------~rl~~a~~~-----Ga~~~-~~~~~~~~~~~i~~~   89 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNP--------ARLAHAKAQ-----GFEIA-DLSLDTPLHEQIAAL   89 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCH--------HHHHHHHHT-----TCEEE-ETTSSSCHHHHHHHH
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccc--------hhhHhhhhc-----cccEE-EeCCCcCHHHHHHHH
Confidence            4678999987 9999888887767776 788888876        666666665     33332 233332   334444


Q ss_pred             hc--CCCEEEEeccc
Q 023244           80 IA--GCTGVLHVATP   92 (285)
Q Consensus        80 ~~--~~d~vih~a~~   92 (285)
                      ..  ++|++|.+.|.
T Consensus        90 t~g~g~D~vid~vG~  104 (195)
T d1kola2          90 LGEPEVDCAVDAVGF  104 (195)
T ss_dssp             HSSSCEEEEEECCCT
T ss_pred             hCCCCcEEEEECccc
Confidence            43  48999999884

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.30  E-value=0.0052  Score=44.96  Aligned_cols=68  Identities=15%  Similarity=-0.006  Sum_probs=47.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|++.|.|. |.||+.+++.|..-|.+|++.++..        ........      .+        ....++++++++
T Consensus        43 ~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~--------~~~~~~~~------~~--------~~~~l~ell~~s   99 (184)
T d1ygya1          43 FGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYV--------SPARAAQL------GI--------ELLSLDDLLARA   99 (184)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTS--------CHHHHHHH------TC--------EECCHHHHHHHC
T ss_pred             cceeeeeccc-cchhHHHHHHhhhccceEEeecCCC--------ChhHHhhc------Cc--------eeccHHHHHhhC
Confidence            4678999987 9999999999988899999988765        11111110      11        123477888889


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |+|+-+.....
T Consensus       100 Div~~~~Plt~  110 (184)
T d1ygya1         100 DFISVHLPKTP  110 (184)
T ss_dssp             SEEEECCCCST
T ss_pred             CEEEEcCCCCc
Confidence            98876665433

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.28  E-value=0.024  Score=41.35  Aligned_cols=68  Identities=18%  Similarity=0.069  Sum_probs=47.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .++++.|.|. |.||+.+++.|..-|.+|...++..        ........            ..+....++.++++++
T Consensus        43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~--------~~~~~~~~------------~~~~~~~~l~~~l~~s  101 (188)
T d2naca1          43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHR--------LPESVEKE------------LNLTWHATREDMYPVC  101 (188)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSC--------CCHHHHHH------------HTCEECSSHHHHGGGC
T ss_pred             cccceeeccc-cccchhhhhhhhccCceEEEEeecc--------cccccccc------------ccccccCCHHHHHHhc
Confidence            4678999987 9999999999998899999999865        11111111            1122234577788888


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+|+-+...
T Consensus       102 D~v~~~~pl  110 (188)
T d2naca1         102 DVVTLNCPL  110 (188)
T ss_dssp             SEEEECSCC
T ss_pred             cchhhcccc
Confidence            887665544

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.27  E-value=0.0086  Score=42.01  Aligned_cols=36  Identities=22%  Similarity=0.220  Sum_probs=29.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (285)
                      ++|+|.|.|+||-||...++-+.+.  .++|.+++-..
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~   38 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR   38 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence            3689999999999999999888764  47888886544

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=95.23  E-value=0.017  Score=38.56  Aligned_cols=35  Identities=23%  Similarity=0.314  Sum_probs=29.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH---cCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD---HGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~   39 (285)
                      ..++++|.|| |++|-+++..|.+   .|.+|+++.|.+
T Consensus        17 ~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          17 APKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            4579999999 9999999987654   378999999876

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=95.23  E-value=0.02  Score=42.25  Aligned_cols=36  Identities=17%  Similarity=0.060  Sum_probs=31.9

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..+|+|+|-|- |.+|+++++.|.+.|.+|++.+.+.
T Consensus        25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~   60 (201)
T d1c1da1          25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDT   60 (201)
T ss_dssp             STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchH
Confidence            35789999986 9999999999999999999888765

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.22  E-value=0.028  Score=46.61  Aligned_cols=81  Identities=15%  Similarity=0.151  Sum_probs=50.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCC--c-----ccc----Cccchh----hhhcCCCCCCCEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELD--P-----EHR----NSKDLS----FLKNLPGASERLRIFHA   68 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~--~-----~~~----~~~~~~----~~~~~~~~~~~~~~~~~   68 (285)
                      ..||||.|+ |.+|+++++.|+..|. ++++++.+...  +     .+.    ...+..    .+..+ ...-++..+..
T Consensus        37 ~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~-np~v~i~~~~~  114 (426)
T d1yovb1          37 TCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDR-VPNCNVVPHFN  114 (426)
T ss_dssp             HCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-STTCCCEEECS
T ss_pred             cCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhh-CCCCceEeeec
Confidence            358999999 7799999999999997 78888864310  0     001    001111    11111 12335666666


Q ss_pred             CCCChhhHHHHhcCCCEEEEe
Q 023244           69 DLSHPDGFDAAIAGCTGVLHV   89 (285)
Q Consensus        69 Dl~d~~~~~~~~~~~d~vih~   89 (285)
                      ++.+..  ...++++|+||.+
T Consensus       115 ~i~~~~--~~~~~~~DlVi~~  133 (426)
T d1yovb1         115 KIQDFN--DTFYRQFHIIVCG  133 (426)
T ss_dssp             CGGGBC--HHHHTTCSEEEEC
T ss_pred             cccchH--HHHHHhcchheec
Confidence            776543  3577899999975

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=95.22  E-value=0.041  Score=37.05  Aligned_cols=73  Identities=12%  Similarity=0.051  Sum_probs=50.2

Q ss_pred             CCCeEEEecC----------CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCCh
Q 023244            4 GKGRVCVTGG----------TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHP   73 (285)
Q Consensus         4 ~~k~ilVtGa----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   73 (285)
                      ..|+|||.|+          --|-+.+.++.|.+.|++++.+..++++.+....              -..-+...-...
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d--------------~aD~lYfePlt~   71 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE--------------MADATYIEPIHW   71 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG--------------GSSEEECSCCCH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh--------------hcceeeeecCCH
Confidence            4589999999          3478999999999999999999988832222211              111223444556


Q ss_pred             hhHHHHhc--CCCEEEEec
Q 023244           74 DGFDAAIA--GCTGVLHVA   90 (285)
Q Consensus        74 ~~~~~~~~--~~d~vih~a   90 (285)
                      +.+.++++  ++|.|+-..
T Consensus        72 e~v~~Ii~~E~pd~il~~~   90 (127)
T d1a9xa3          72 EVVRKIIEKERPDAVLPTM   90 (127)
T ss_dssp             HHHHHHHHHHCCSEEECSS
T ss_pred             HHHHHHHHHhCcCCeEEEe
Confidence            77877775  699988543

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=95.20  E-value=0.014  Score=39.08  Aligned_cols=35  Identities=31%  Similarity=0.285  Sum_probs=28.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc---CCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH---GYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~   39 (285)
                      ..++++|.|| |++|-.++..|.+.   |.+|+++.|.+
T Consensus        19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            4579999999 99999999766554   56899998866

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=95.15  E-value=0.011  Score=46.98  Aligned_cols=35  Identities=26%  Similarity=0.247  Sum_probs=31.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ..|+|+|+|| |..|-..+..|+++|++|+++.+++
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578999999 9999999999999999999998765

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=95.13  E-value=0.011  Score=41.48  Aligned_cols=35  Identities=17%  Similarity=0.240  Sum_probs=29.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (285)
                      ||+|.|.|+||.||...+.-+.+.  .++|.+++-..
T Consensus         1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~   37 (151)
T d1q0qa2           1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK   37 (151)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred             CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence            578999999999999999888765  47888887543

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.11  E-value=0.0019  Score=46.69  Aligned_cols=116  Identities=13%  Similarity=0.062  Sum_probs=61.3

Q ss_pred             CCeEEEecC-CchhHHHHHHHHHHcC----CeEEEEecCCCCccccCccchhhhhcCC-----CCCCCEEEEecCCCChh
Q 023244            5 KGRVCVTGG-TGFIASWLIMRLLDHG----YSVTTTVRSELDPEHRNSKDLSFLKNLP-----GASERLRIFHADLSHPD   74 (285)
Q Consensus         5 ~k~ilVtGa-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~Dl~d~~   74 (285)
                      ++||.|.|| +.+.+..++..+....    -++.+++.+.     . ..+.+.+....     ....++..     ....
T Consensus         1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e-----~-~~~~~~~d~~~~~~~~~~~~~~~~-----~~~t   69 (169)
T d1s6ya1           1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPE-----G-KEKLEIVGALAKRMVEKAGVPIEI-----HLTL   69 (169)
T ss_dssp             CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGG-----G-HHHHHHHHHHHHHHHHHTTCCCEE-----EEES
T ss_pred             CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCc-----c-HHHHHHHHHHHHHHHHhcCCCcee-----eecC
Confidence            468999998 3344455555554432    3788888765     0 01111111100     00011111     1123


Q ss_pred             hHHHHhcCCCEEEEecccCCCCCCChH-------------------HHHHHHHHHHHHHHHHHHHhcCCccEEEEec
Q 023244           75 GFDAAIAGCTGVLHVATPVDFEDKEPE-------------------EVITQRAINGTLGILKSCLKSGTVKRVVYTS  132 (285)
Q Consensus        75 ~~~~~~~~~d~vih~a~~~~~~~~~~~-------------------~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S  132 (285)
                      +..+.++++|+||..|+..........                   -.....|+...+.+++.+++.. ..-++.+-
T Consensus        70 d~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~-pda~~i~v  145 (169)
T d1s6ya1          70 DRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELC-PDAWLINF  145 (169)
T ss_dssp             CHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEC
T ss_pred             CchhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcC-CCeEEEEe
Confidence            345667899999999986543100000                   1223467888888999999888 44444443

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=95.07  E-value=0.0094  Score=46.53  Aligned_cols=33  Identities=24%  Similarity=0.243  Sum_probs=30.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|+|| |.-|...+..|.++|++|+++-+++
T Consensus         1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            57999999 9999999999999999999998764

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.03  E-value=0.022  Score=42.07  Aligned_cols=64  Identities=14%  Similarity=0.064  Sum_probs=46.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+|.|.|. |-||+.+++.|..-|.+|++.++...        ..        ....+        +..+++++++.+
T Consensus        44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~--------~~--------~~~~~--------~~~~l~~l~~~~   98 (199)
T d1dxya1          44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM--------KG--------DHPDF--------DYVSLEDLFKQS   98 (199)
T ss_dssp             GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC--------SS--------CCTTC--------EECCHHHHHHHC
T ss_pred             cceeeeeeec-ccccccccccccccceeeeccCCccc--------hh--------hhcch--------hHHHHHHHHHhc
Confidence            3578999988 99999999999999999999988651        00        00011        123577888889


Q ss_pred             CEEEEeccc
Q 023244           84 TGVLHVATP   92 (285)
Q Consensus        84 d~vih~a~~   92 (285)
                      |+|+.+...
T Consensus        99 D~v~~~~pl  107 (199)
T d1dxya1          99 DVIDLHVPG  107 (199)
T ss_dssp             SEEEECCCC
T ss_pred             ccceeeecc
Confidence            988776543

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.02  E-value=0.0094  Score=46.62  Aligned_cols=33  Identities=21%  Similarity=0.163  Sum_probs=30.8

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|.|| |..|..++..|.+.|++|+++.+++
T Consensus         3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~   35 (292)
T d1k0ia1           3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQT   35 (292)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            37999999 9999999999999999999999876

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.01  E-value=0.051  Score=37.16  Aligned_cols=29  Identities=17%  Similarity=0.328  Sum_probs=23.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHc-CCeEEEE
Q 023244            7 RVCVTGGTGFIASWLIMRLLDH-GYSVTTT   35 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~   35 (285)
                      ||.|+|++|-+|+.+++.+.+. ++++.+.
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~   30 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAE   30 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEE
Confidence            6999999999999999988765 5676544

>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Transcriptional repressor Rex, C-terminal domain
domain: Transcriptional repressor Rex, C-terminal domain
species: Thermus aquaticus [TaxId: 271]

Probab=94.95  E-value=0.04  Score=37.29  Aligned_cols=94  Identities=14%  Similarity=0.098  Sum_probs=57.3

Q ss_pred             CCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC-
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG-   82 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-   82 (285)
                      +.+|+|.|| |.+|+.|++.+.. .+++++++.-+.+       ++...      .-.++.++.     .+.+.++.++ 
T Consensus         3 ~~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~-------~k~G~------~I~Gi~V~~-----~~~l~~~~~~~   63 (126)
T d2dt5a2           3 KWGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDP-------EKVGR------PVRGGVIEH-----VDLLPQRVPGR   63 (126)
T ss_dssp             CEEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCT-------TTTTC------EETTEEEEE-----GGGHHHHSTTT
T ss_pred             CceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCch-------HhcCC------EECCEEEec-----HHHHHHHHhhc
Confidence            458999999 9999999998753 4788888765441       11110      012455542     3446665543 


Q ss_pred             CCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccce
Q 023244           83 CTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSGTVKRVVYTSSNA  135 (285)
Q Consensus        83 ~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~SS~~  135 (285)
                      ++.++-+...                 ...+.+++.+.+.| ++.+..++...
T Consensus        64 i~iai~~i~~-----------------~~~~~I~d~l~~~g-Ik~I~~f~~~~   98 (126)
T d2dt5a2          64 IEIALLTVPR-----------------EAAQKAADLLVAAG-IKGILNFAPVV   98 (126)
T ss_dssp             CCEEEECSCH-----------------HHHHHHHHHHHHHT-CCEEEECSSSC
T ss_pred             ccEEEEeCCH-----------------HHHHHHHHHHHHcC-CCEEeecCcee
Confidence            5555533220                 11235677788888 98888877654

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=94.85  E-value=0.031  Score=40.86  Aligned_cols=69  Identities=13%  Similarity=0.014  Sum_probs=47.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .++++.|.|. |.||+.+++.|..-|.+|.+.++..        ........            ......++++++++.+
T Consensus        46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~--------~~~~~~~~------------~~~~~~~~l~~ll~~s  104 (191)
T d1gdha1          46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHR--------ASSSDEAS------------YQATFHDSLDSLLSVS  104 (191)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSC--------CCHHHHHH------------HTCEECSSHHHHHHHC
T ss_pred             cccceEEeec-ccchHHHHHHHHhhccccccccccc--------cccchhhc------------ccccccCCHHHHHhhC
Confidence            4689999988 9999999999988899999988765        11111000            0111224578888889


Q ss_pred             CEEEEecccC
Q 023244           84 TGVLHVATPV   93 (285)
Q Consensus        84 d~vih~a~~~   93 (285)
                      |+|+-+....
T Consensus       105 D~v~l~~plt  114 (191)
T d1gdha1         105 QFFSLNAPST  114 (191)
T ss_dssp             SEEEECCCCC
T ss_pred             CeEEecCCCC
Confidence            9887665543

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=94.84  E-value=0.012  Score=46.55  Aligned_cols=34  Identities=12%  Similarity=0.087  Sum_probs=30.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |..|+|+|| |.-|..+|+.|++.|++|.++.+++
T Consensus         1 M~dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           1 MYDYIIVGS-GLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             CccEEEECC-cHHHHHHHHHHHhCCCcEEEEECCC
Confidence            357999999 9999999999999999999998765

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=94.82  E-value=0.015  Score=46.51  Aligned_cols=37  Identities=19%  Similarity=0.140  Sum_probs=31.8

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcC--CeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHG--YSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~   39 (285)
                      |+ .+|+|+|+|| |.-|-..+..|+++|  ++|+++-|+.
T Consensus         1 m~-~~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~   39 (335)
T d2gv8a1           1 LP-TIRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRG   39 (335)
T ss_dssp             CC-SCCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSS
T ss_pred             CC-CCCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCC
Confidence            66 3689999999 999999999998776  6999998875

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=94.69  E-value=0.017  Score=41.67  Aligned_cols=34  Identities=15%  Similarity=0.289  Sum_probs=29.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +++|+|.|| |++|-.++..|.+.|.+|.++.+..
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~~~~   36 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRLVGD   36 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEEecC
Confidence            578999998 9999999999999998877776544

>d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.68  E-value=0.017  Score=42.35  Aligned_cols=33  Identities=15%  Similarity=0.093  Sum_probs=28.3

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (285)
                      |||+|.|| |++|-.++..|.+.  +.+|+++.|..
T Consensus         1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~   35 (198)
T d1nhpa1           1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD   35 (198)
T ss_dssp             CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred             CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            58999999 99999999999876  45788888765

>d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.61  E-value=0.01  Score=43.09  Aligned_cols=33  Identities=30%  Similarity=0.361  Sum_probs=27.4

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEec
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR   37 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (285)
                      |+.+|+|.|| |++|-.++..|.+.|.++.++.+
T Consensus         2 m~a~VvIIGg-G~~G~e~A~~l~~~g~~v~i~~~   34 (183)
T d1d7ya1           2 LKAPVVVLGA-GLASVSFVAELRQAGYQGLITVV   34 (183)
T ss_dssp             CCSSEEEECC-SHHHHHHHHHHHHHTCCSCEEEE
T ss_pred             CCCCEEEECc-cHHHHHHHHHHHhcCCceEEEEE
Confidence            3467999998 99999999999998987665554

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.58  E-value=0.066  Score=41.80  Aligned_cols=27  Identities=22%  Similarity=0.235  Sum_probs=24.2

Q ss_pred             CCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244           13 GTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus        13 atG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +||-.|..|++.|..+|++|+.+.+..
T Consensus        44 SSGk~G~alA~~~~~~Ga~V~li~g~~   70 (290)
T d1p9oa_          44 SSGRRGATSAEAFLAAGYGVLFLYRAR   70 (290)
T ss_dssp             CCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             CchHHHHHHHHHHHHcCCEEEEEecCC
Confidence            379999999999999999999998754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.039  Score=38.96  Aligned_cols=69  Identities=16%  Similarity=0.044  Sum_probs=49.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|.|= |.+|+.+++.|...|.+|++...++        -.  .++..           .|-.....+++++...
T Consensus        23 ~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp--------~~--al~A~-----------~dG~~v~~~~~a~~~a   80 (163)
T d1li4a1          23 AGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDP--------IN--ALQAA-----------MEGYEVTTMDEACQEG   80 (163)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH--------HH--HHHHH-----------HTTCEECCHHHHTTTC
T ss_pred             cCCEEEEecc-ccccHHHHHHHHhCCCeeEeeeccc--------ch--hHHhh-----------cCceEeeehhhhhhhc
Confidence            4789999965 9999999999999999999999977        11  11111           2222233467777788


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |++|-+.+..+
T Consensus        81 divvtaTGn~~   91 (163)
T d1li4a1          81 NIFVTTTGCID   91 (163)
T ss_dssp             SEEEECSSCSC
T ss_pred             cEEEecCCCcc
Confidence            88887766433

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.34  E-value=0.025  Score=44.89  Aligned_cols=36  Identities=22%  Similarity=0.296  Sum_probs=31.5

Q ss_pred             CCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            3 EGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         3 ~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+.+||+|+|| |.-|-..+.+|.+.|++|+++-.+.
T Consensus         3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            34578999999 9999999999999999999996644

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=94.33  E-value=0.01  Score=42.05  Aligned_cols=37  Identities=22%  Similarity=0.318  Sum_probs=25.0

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHH-c-CCeEEEE-ecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLD-H-GYSVTTT-VRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~-~-g~~V~~~-~r~~   39 (285)
                      |+. +.||.|.| +|.+|+.+...+++ . ..++.++ +|+.
T Consensus         1 M~k-kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~   40 (157)
T d1nvmb1           1 MNQ-KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDA   40 (157)
T ss_dssp             CCS-CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCT
T ss_pred             CCC-CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecch
Confidence            663 57899999 79999976544444 3 3477776 4554

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=94.31  E-value=0.02  Score=44.39  Aligned_cols=31  Identities=19%  Similarity=0.154  Sum_probs=29.1

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|| |..|..++.+|+++|++|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899998 9999999999999999999999865

>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.30  E-value=0.0037  Score=47.50  Aligned_cols=27  Identities=30%  Similarity=0.262  Sum_probs=24.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEE
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVT   33 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~   33 (285)
                      |||+|+|| |.+|...+.+|+++|++|+
T Consensus         1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~   27 (246)
T d1kifa1           1 MRVVVIGA-GVIGLSTALCIHERYHSVL   27 (246)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred             CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence            58999999 9999999999999998643

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.026  Score=38.84  Aligned_cols=34  Identities=26%  Similarity=0.356  Sum_probs=29.0

Q ss_pred             CCeEEEecCCchhHHHHHHHHHH----cCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLD----HGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~----~g~~V~~~~r~~   39 (285)
                      .++++|.|| |++|-+++..|..    .|.+|+++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            468999998 9999999998853    588999998865

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=94.23  E-value=0.022  Score=44.77  Aligned_cols=32  Identities=22%  Similarity=0.500  Sum_probs=29.3

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      +|+|+|| |.+|..++.+|+++|. +|+++.|+.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            6999999 9999999999999996 699999875

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.20  E-value=0.039  Score=39.76  Aligned_cols=32  Identities=16%  Similarity=0.279  Sum_probs=26.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEEecC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (285)
                      -||.|-| .|.||+.+++.|.++ +.+|+++...
T Consensus         2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~   34 (178)
T d1b7go1           2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT   34 (178)
T ss_dssp             EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred             eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence            4899998 599999999999976 4688877543

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.07  E-value=0.018  Score=41.66  Aligned_cols=34  Identities=15%  Similarity=0.216  Sum_probs=29.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++|+|+|.|+ |..++.++..|.+.| +|+++.|+.
T Consensus        17 ~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~   50 (177)
T d1nvta1          17 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTV   50 (177)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred             CCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhh
Confidence            5789999998 788999999997766 899999987

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=93.99  E-value=0.15  Score=39.47  Aligned_cols=34  Identities=21%  Similarity=0.182  Sum_probs=30.2

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      .+|+|+|-|- |.+|+++++.|.+.|.+|++++-+
T Consensus        35 ~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          35 GDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            4689999988 999999999999999999988753

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=93.96  E-value=0.085  Score=37.58  Aligned_cols=75  Identities=13%  Similarity=0.070  Sum_probs=47.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEec-CCCC-hhhHHHHh
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-DLSH-PDGFDAAI   80 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~d-~~~~~~~~   80 (285)
                      ++.+|+|.|+ |.+|...+..+...|. +|+++++++        ++.+..+++..    -+.+.. +-.+ .+...+..
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~--------~rl~~a~~~GA----d~~in~~~~~~~~~~~~~~~   94 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNP--------DKFEKAKVFGA----TDFVNPNDHSEPISQVLSKM   94 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCG--------GGHHHHHHTTC----CEEECGGGCSSCHHHHHHHH
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchH--------HHHHHHHHcCC----cEEEcCCCcchhHHHHHHhh
Confidence            4568999998 5577777777777764 788888877        66676666621    122222 1111 13333333


Q ss_pred             --cCCCEEEEecc
Q 023244           81 --AGCTGVLHVAT   91 (285)
Q Consensus        81 --~~~d~vih~a~   91 (285)
                        .++|++|.+.|
T Consensus        95 ~~~G~d~vid~~G  107 (175)
T d1cdoa2          95 TNGGVDFSLECVG  107 (175)
T ss_dssp             HTSCBSEEEECSC
T ss_pred             ccCCcceeeeecC
Confidence              25899999887

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.91  E-value=0.24  Score=35.23  Aligned_cols=76  Identities=12%  Similarity=0.177  Sum_probs=45.9

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecC-----------CCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHAD-----------LSH   72 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----------l~d   72 (285)
                      ++||.|-|- |-||+.+++.|.++. .+++++....      .......+...     .+..+..+           +..
T Consensus         2 ~irIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~------~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~   69 (172)
T d2czca2           2 KVKVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTK------PDFEAYRAKEL-----GIPVYAASEEFIPRFEKEGFEV   69 (172)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESS------CSHHHHHHHHT-----TCCEEESSGGGHHHHHHHTCCC
T ss_pred             cEEEEEECC-CHHHHHHHHHHHhCCCceEEEEecCC------ChHHHHHhhhc-----CceeecccccceeeecccCccc
Confidence            479999997 999999999998764 5777665322      11222222222     11122211           222


Q ss_pred             hhhHHHHhcCCCEEEEeccc
Q 023244           73 PDGFDAAIAGCTGVLHVATP   92 (285)
Q Consensus        73 ~~~~~~~~~~~d~vih~a~~   92 (285)
                      ...+..+.+++|+||-|.|.
T Consensus        70 ~~~~~~~~~~vDvViEcTG~   89 (172)
T d2czca2          70 AGTLNDLLEKVDIIVDATPG   89 (172)
T ss_dssp             SCBHHHHHTTCSEEEECCST
T ss_pred             cchhhhhhccCCEEEECCCC
Confidence            23566666789999999874

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.86  E-value=0.075  Score=37.34  Aligned_cols=69  Identities=13%  Similarity=0.055  Sum_probs=50.1

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAGC   83 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   83 (285)
                      .+|+++|.|= |.+|+-+++.|...|.+|+++..+|.          ..++..           .|=..-..++++++..
T Consensus        22 aGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi----------~alqA~-----------mdGf~v~~~~~a~~~a   79 (163)
T d1v8ba1          22 SGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI----------CAIQAV-----------MEGFNVVTLDEIVDKG   79 (163)
T ss_dssp             TTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH----------HHHHHH-----------TTTCEECCHHHHTTTC
T ss_pred             cCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch----------hhHHHH-----------hcCCccCchhHccccC
Confidence            4789999988 99999999999999999999998871          111111           1222233467777888


Q ss_pred             CEEEEecccCC
Q 023244           84 TGVLHVATPVD   94 (285)
Q Consensus        84 d~vih~a~~~~   94 (285)
                      |++|-.-|-.+
T Consensus        80 Di~vTaTGn~~   90 (163)
T d1v8ba1          80 DFFITCTGNVD   90 (163)
T ss_dssp             SEEEECCSSSS
T ss_pred             cEEEEcCCCCc
Confidence            88887776544

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.80  E-value=0.029  Score=42.22  Aligned_cols=31  Identities=26%  Similarity=0.213  Sum_probs=29.0

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|| |.-|...|..|++.|++|.++.++.
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            799997 9999999999999999999999875

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.80  E-value=0.44  Score=32.30  Aligned_cols=35  Identities=20%  Similarity=0.214  Sum_probs=29.5

Q ss_pred             CCeEEEecCC---chhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGT---GFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .|+|.|.|||   +-.|..+++.|.+.|++++.+.-++
T Consensus        13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~   50 (136)
T d1iuka_          13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRF   50 (136)
T ss_dssp             CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGG
T ss_pred             CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEecc
Confidence            4789999998   6689999999999999988776543

>d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=93.74  E-value=0.029  Score=39.73  Aligned_cols=31  Identities=26%  Similarity=0.281  Sum_probs=27.2

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ||+|.|| |++|-.++..|. ++.+|+++.+.+
T Consensus         2 rVvIIGg-G~~G~e~A~~l~-~~~~Vtvv~~~~   32 (167)
T d1xhca1           2 KVVIVGN-GPGGFELAKQLS-QTYEVTVIDKEP   32 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred             eEEEECC-cHHHHHHHHHHH-cCCCEEEEeccc
Confidence            7999999 999999999995 478999998764

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=93.49  E-value=0.028  Score=42.34  Aligned_cols=35  Identities=26%  Similarity=0.186  Sum_probs=31.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|+|-|- |.+|+++++.|.+.|.+|++.+.+.
T Consensus        38 ~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~   72 (230)
T d1leha1          38 EGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNK   72 (230)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccH
Confidence            5789999988 9999999999999999999887655

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.16  E-value=0.055  Score=41.43  Aligned_cols=33  Identities=21%  Similarity=0.179  Sum_probs=29.9

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      ++|+|+|| |..|..++..|.+.|. +|+++-+++
T Consensus         2 ~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~   35 (288)
T d3c96a1           2 IDILIAGA-GIGGLSCALALHQAGIGKVTLLESSS   35 (288)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence            58999999 9999999999999994 898998876

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=93.13  E-value=0.045  Score=41.50  Aligned_cols=33  Identities=24%  Similarity=0.299  Sum_probs=29.5

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      ++|+|+|| |.-|...+..|.++|+ +|+++-+++
T Consensus         1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            36999999 9999999999999995 799998865

>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=92.48  E-value=0.19  Score=36.85  Aligned_cols=80  Identities=11%  Similarity=0.110  Sum_probs=46.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccc--cCccchhhhhcCCCCCCCEEEEe-cCCCChhhHHHHhc-
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEH--RNSKDLSFLKNLPGASERLRIFH-ADLSHPDGFDAAIA-   81 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~Dl~d~~~~~~~~~-   81 (285)
                      |||+|.|. +-.|..+++.|.+.|++|.++.-.+.....  ..........+.     ++.++. .++.+.+.++.+.+ 
T Consensus         1 Mkiv~~~~-~~~g~~~l~~L~~~g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~-----~i~~~~~~~~~~~~~~~~i~~~   74 (203)
T d2blna2           1 MKTVVFAY-HDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGSVARLAAER-----GIPVYAPDNVNHPLWVERIAQL   74 (203)
T ss_dssp             CEEEEEEC-HHHHHHHHHHHHHTTCEEEEEECCCC------CCCCHHHHHHHH-----TCCEECCSCCCSHHHHHHHHHT
T ss_pred             CeEEEEec-CHHHHHHHHHHHHCCCCEEEEEcCCCCCCcccccCHHHHHHHHc-----CCcceecccccchhhhhhhhhh
Confidence            57888866 557999999999999999876643310000  000111111111     455554 46666655544433 


Q ss_pred             CCCEEEEecc
Q 023244           82 GCTGVLHVAT   91 (285)
Q Consensus        82 ~~d~vih~a~   91 (285)
                      ++|+++....
T Consensus        75 ~~Dlii~~g~   84 (203)
T d2blna2          75 SPDVIFSFYY   84 (203)
T ss_dssp             CCSEEEEESC
T ss_pred             cccceeeeec
Confidence            5898887764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=91.74  E-value=1  Score=31.70  Aligned_cols=32  Identities=13%  Similarity=0.189  Sum_probs=25.8

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-CeEEEEec
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-YSVTTTVR   37 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r   37 (285)
                      |++|.|-|- |-||+.+++.|..++ .+|+++..
T Consensus         1 M~~VgINGf-GRIGR~v~R~l~~~~di~vvaInd   33 (171)
T d1cf2o1           1 MKAVAINGY-GTVGKRVADAIAQQDDMKVIGVSK   33 (171)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred             CeEEEEEcC-cHHHHHHHHHHHhCCCceEEEEec
Confidence            468999985 999999999998775 57776654

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=91.15  E-value=0.06  Score=39.09  Aligned_cols=38  Identities=16%  Similarity=0.117  Sum_probs=33.1

Q ss_pred             CCCCCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+...++|+|+|| |..|...+..|++.|.+|+++.+..
T Consensus         1 m~~~~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~   38 (192)
T d1vdca1           1 LETHNTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM   38 (192)
T ss_dssp             CEEEEEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred             CCcccceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence            5656789999999 9999999999999999999998654

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.11  E-value=0.11  Score=41.07  Aligned_cols=31  Identities=29%  Similarity=0.344  Sum_probs=28.8

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|| |.-|-..+..|++.|++|+++-++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            789998 9999999999999999999998755

>d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=91.06  E-value=1.2  Score=32.44  Aligned_cols=94  Identities=18%  Similarity=0.131  Sum_probs=60.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEec-CCC--------
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-DLS--------   71 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~--------   71 (285)
                      .+.||.|.|. |.-|..++..|.+.+.   +.++++.+.           ..+....   ...++..+ .++        
T Consensus        14 ~~~ki~ViGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----------~~L~~~~---~~~ki~ig~~~t~g~Gag~~   78 (209)
T d2vapa1          14 TKAKITVVGC-GGAGNNTITRLKMEGIEGAKTVAINTDA-----------QQLIRTK---ADKKILIGKKLTRGLGAGGN   78 (209)
T ss_dssp             TCCCEEEEEE-HHHHHHHHHHHHHHTCTTEEEEEEESBH-----------HHHHTSC---CSEEEECCTTTTTTBCCTTC
T ss_pred             cCCcEEEEEe-CChHHHHHHHHHHcCCCceEEEEEeCCH-----------HHHhcCC---cchhcccccccccccccccc
Confidence            4568999998 9999999999998764   455555544           1222221   12222222 111        


Q ss_pred             ----------ChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 023244           72 ----------HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (285)
Q Consensus        72 ----------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (285)
                                +.+.+.+.++++|.||-+||...-..           ..++-.+.+.+++.+
T Consensus        79 p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGGTG-----------sgaapvia~~ake~g  129 (209)
T d2vapa1          79 PKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGTG-----------TGSAPVVAEISKKIG  129 (209)
T ss_dssp             HHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSHH-----------HHHHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCcc-----------ccHHHHHHHHHHHcC
Confidence                      22477778889999999999866621           233446788888887

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.98  E-value=0.11  Score=39.10  Aligned_cols=32  Identities=22%  Similarity=0.236  Sum_probs=29.7

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      -|+|+|| |..|...+..|++.|++|+++.+++
T Consensus         4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~   35 (251)
T d2i0za1           4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGN   35 (251)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            4899999 9999999999999999999999875

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=90.63  E-value=0.25  Score=36.99  Aligned_cols=76  Identities=12%  Similarity=0.099  Sum_probs=51.7

Q ss_pred             CCCeEEEecC-CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGG-TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++++||=.|| ||+.-++|+.. ... -.|++++.++        ...+.+.......+++.++.+|..++.........
T Consensus        74 pG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~--------~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~  143 (230)
T d1g8sa_          74 RDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAP--------RIMRELLDACAERENIIPILGDANKPQEYANIVEK  143 (230)
T ss_dssp             TTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCH--------HHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             CCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcH--------HHHHHHHHHHhhhcccceEEEeeccCcccccccce
Confidence            4678999995 67777777764 233 4899999987        44444444434456888899999998877554444


Q ss_pred             CCEEEEe
Q 023244           83 CTGVLHV   89 (285)
Q Consensus        83 ~d~vih~   89 (285)
                      +|++++.
T Consensus       144 v~~i~~~  150 (230)
T d1g8sa_         144 VDVIYED  150 (230)
T ss_dssp             EEEEEEC
T ss_pred             eEEeecc
Confidence            5666553

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=90.57  E-value=0.18  Score=35.10  Aligned_cols=34  Identities=29%  Similarity=0.221  Sum_probs=29.1

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCC-eEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~   39 (285)
                      +++|+|+|| |..|.-.+..+.+.|. .|+++.|..
T Consensus        45 ~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          45 RGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             CCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            578999998 9999999999999986 577887765

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=90.49  E-value=0.16  Score=37.93  Aligned_cols=77  Identities=14%  Similarity=0.059  Sum_probs=53.7

Q ss_pred             CCCeEEEec-CCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTG-GTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++++||=.| |+|+.-++|++..-.. -.|++++.++        ...+.+........++..+..|..+++.+......
T Consensus        73 pG~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s~--------~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~  143 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSP--------RVLRELVPIVEERRNIVPILGDATKPEEYRALVPK  143 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCH--------HHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCC
T ss_pred             CCCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCcH--------HHHHHHHHHHHhcCCceEEEEECCCcccccccccc
Confidence            467888888 4677777777755333 4899999987        44444333323345788899999998887666667


Q ss_pred             CCEEEEe
Q 023244           83 CTGVLHV   89 (285)
Q Consensus        83 ~d~vih~   89 (285)
                      +|+|++.
T Consensus       144 vD~i~~d  150 (227)
T d1g8aa_         144 VDVIFED  150 (227)
T ss_dssp             EEEEEEC
T ss_pred             eEEEEEE
Confidence            8888864

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=90.42  E-value=0.14  Score=40.09  Aligned_cols=32  Identities=31%  Similarity=0.447  Sum_probs=30.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .|+|+|| |+-|-.++.+|.+.|.+|+++.+.+
T Consensus         9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~   40 (298)
T d1w4xa1           9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAG   40 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCC
Confidence            6999999 9999999999999999999999876

>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: 10-formyltetrahydrofolate dehydrogenase domain 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.34  E-value=0.3  Score=35.73  Aligned_cols=32  Identities=16%  Similarity=0.213  Sum_probs=27.0

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      |||++.|. +..|..+++.|.+.|++|.++...
T Consensus         1 MkI~~~G~-~~~~~~~l~~L~~~~~~i~~V~t~   32 (203)
T d2bw0a2           1 MKIAVIGQ-SLFGQEVYCHLRKEGHEVVGVFTV   32 (203)
T ss_dssp             CEEEEECC-HHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred             CEEEEEcC-CHHHHHHHHHHHHCCCcEEEEEcC
Confidence            57999976 678999999999999999877643

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.31  E-value=0.1  Score=39.60  Aligned_cols=33  Identities=21%  Similarity=0.223  Sum_probs=30.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .-|+|+|| |.-|...+.+|++.|.+|.++.+.+
T Consensus         5 ~DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~   37 (253)
T d2gqfa1           5 SENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGK   37 (253)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            35999999 9999999999999999999999876

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.19  E-value=0.15  Score=33.11  Aligned_cols=35  Identities=20%  Similarity=0.011  Sum_probs=29.8

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|+|.|+ |.-|.-++..|+..+-+++...|+.
T Consensus        31 ~gK~VlVVG~-g~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          31 VGESVLVVGG-ASSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             TTCCEEEECS-SHHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             CCCeEEEECC-CCCHHHHHHHHHHhcCEEEEEEecC
Confidence            4689999998 8999999999998877777777665

>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Methionyl-tRNAfmet formyltransferase
species: Escherichia coli [TaxId: 562]

Probab=90.08  E-value=0.2  Score=36.70  Aligned_cols=34  Identities=21%  Similarity=0.180  Sum_probs=27.4

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .|||++.|. +..+..+++.|.+.|++|.++...+
T Consensus         3 ~mKI~f~G~-~~~~~~~L~~L~~~~~~i~~Vit~~   36 (206)
T d1fmta2           3 SLRIIFAGT-PDFAARHLDALLSSGHNVVGVFTQP   36 (206)
T ss_dssp             CCEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CcEEEEECC-CHHHHHHHHHHHhCCCCEEEEEeCC
Confidence            578999976 6788889999999999988776443

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=89.92  E-value=0.19  Score=37.91  Aligned_cols=34  Identities=21%  Similarity=0.289  Sum_probs=30.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      .+++|+|-|. |.+|+++++.|.+.|.+|++++-.
T Consensus        30 ~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          30 EGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence            5689999986 999999999999999999988754

>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Pyrococcus abyssi [TaxId: 29292]

Probab=89.72  E-value=0.18  Score=41.08  Aligned_cols=32  Identities=22%  Similarity=0.116  Sum_probs=24.9

Q ss_pred             CeEEEecC------CchhH---HHHHHHHHHcCCeEEEEec
Q 023244            6 GRVCVTGG------TGFIA---SWLIMRLLDHGYSVTTTVR   37 (285)
Q Consensus         6 k~ilVtGa------tG~iG---~~l~~~L~~~g~~V~~~~r   37 (285)
                      ||||+++.      +|++|   ..|+++|.++||+|+++..
T Consensus         1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp   41 (437)
T d2bisa1           1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP   41 (437)
T ss_dssp             CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence            57888664      46666   5678999999999999874

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.63  E-value=0.41  Score=40.51  Aligned_cols=32  Identities=19%  Similarity=0.247  Sum_probs=27.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC-eEEEEecC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY-SVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~   38 (285)
                      .+|+|.|+ |.+|+++++.|+..|. ++++++.+
T Consensus        26 s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d   58 (529)
T d1yova1          26 AHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN   58 (529)
T ss_dssp             CEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred             CCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence            58999998 7799999999999885 78888754

>d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Streptomyces sp. [TaxId: 1931]

Probab=89.46  E-value=0.16  Score=40.62  Aligned_cols=30  Identities=23%  Similarity=0.245  Sum_probs=27.9

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      |+|+|+ |+-|..+|.+|++.|++|.++-+.
T Consensus         5 VIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   34 (367)
T d1n4wa1           5 AVVIGT-GYGAAVSALRLGEAGVQTLMLEMG   34 (367)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEeCc-CHHHHHHHHHHHHCcCeEEEEecC
Confidence            789987 999999999999999999999874

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.22  E-value=0.19  Score=37.24  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=29.1

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc--CCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH--GYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~   39 (285)
                      ++|+|+|| |.-|...++.|.+.  |++|+++.+.+
T Consensus         2 ~kv~iIGa-GpaGl~aA~~L~~~~~~~~V~v~e~~~   36 (230)
T d1cjca2           2 PQICVVGS-GPAGFYTAQHLLKHHSRAHVDIYEKQL   36 (230)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHCSSCEEEEECSSS
T ss_pred             CeEEEECc-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence            58999998 99999999999765  78999998865

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=89.12  E-value=0.24  Score=37.61  Aligned_cols=33  Identities=21%  Similarity=0.107  Sum_probs=29.7

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEec
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVR   37 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r   37 (285)
                      .+++|+|-|. |.+|+++++.|.+.|.+|+++.-
T Consensus        35 ~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          35 VGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             TTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            5689999986 99999999999999999998864

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=89.03  E-value=1.3  Score=32.86  Aligned_cols=34  Identities=24%  Similarity=0.296  Sum_probs=28.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHH-cCCeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLD-HGYSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~   38 (285)
                      ++++|+|-|. |.+|+++++.|.+ .|..|++++-+
T Consensus        30 ~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          30 KKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecC
Confidence            5689999975 9999999999975 59999888643

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.91  E-value=0.39  Score=34.23  Aligned_cols=33  Identities=21%  Similarity=0.078  Sum_probs=25.7

Q ss_pred             CeEEEecCCchhHHHHHHHHHHc-CCeEEEE-ecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDH-GYSVTTT-VRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~   39 (285)
                      .||.|+|+ |.+|+..++.|... +.+|+++ +++.
T Consensus         2 iki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~   36 (184)
T d1ydwa1           2 IRIGVMGC-ADIARKVSRAIHLAPNATISGVASRSL   36 (184)
T ss_dssp             EEEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSH
T ss_pred             eEEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCc
Confidence            58999996 89999999988765 5688766 4443

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=88.82  E-value=0.2  Score=39.00  Aligned_cols=31  Identities=23%  Similarity=0.185  Sum_probs=29.1

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|| |..|...+.+|+++|.+|+++.+.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899998 9999999999999999999998865

>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Tubulin nucleotide-binding domain-like
superfamily: Tubulin nucleotide-binding domain-like
family: Tubulin, GTPase domain
domain: Cell-division protein FtsZ
species: Thermotoga maritima [TaxId: 2336]

Probab=88.80  E-value=2.6  Score=30.17  Aligned_cols=92  Identities=14%  Similarity=0.103  Sum_probs=59.6

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC---eEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEec-CCC----------
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY---SVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHA-DLS----------   71 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-Dl~----------   71 (285)
                      +||.|.|- |.-|..++..|.+.+.   +.++++.+.           ..+...+.   ..++..+ +++          
T Consensus         1 ~kI~viGv-GGaG~n~v~~l~~~~~~~v~~iainTD~-----------~~L~~~~a---~~ki~iG~~~t~G~G~g~~p~   65 (194)
T d1w5fa1           1 LKIKVIGV-GGAGNNAINRMIEIGIHGVEFVAVNTDL-----------QVLEASNA---DVKIQIGENITRGLGAGGRPE   65 (194)
T ss_dssp             CCEEEEEE-HHHHHHHHHHHHHHCCTTEEEEEEESCH-----------HHHHTCCC---SEEEECCTTTTTTSCCTTCHH
T ss_pred             CeEEEEEe-CchHHHHHHHHHHcCCCceEEEEEcCCH-----------HHHhcCCc---ceEEecccccCCCcccccCch
Confidence            47899988 9999999999988763   455555543           22222211   2233322 221          


Q ss_pred             --------ChhhHHHHhcCCCEEEEecccCCCCCCChHHHHHHHHHHHHHHHHHHHHhcC
Q 023244           72 --------HPDGFDAAIAGCTGVLHVATPVDFEDKEPEEVITQRAINGTLGILKSCLKSG  123 (285)
Q Consensus        72 --------d~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~  123 (285)
                              +.+.+.+.++++|.||-+||...-.           -.-++-.+.+.+++.+
T Consensus        66 ~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT-----------GtgaapviA~~ake~g  114 (194)
T d1w5fa1          66 IGEQAALESEEKIREVLQDTHMVFITAGFGGGT-----------GTGASPVIAKIAKEMG  114 (194)
T ss_dssp             HHHHHHHHTHHHHHHHTTTCSEEEEEEETTSSH-----------HHHHHHHHHHHHHHTT
T ss_pred             hhHhHHHHHHHHHHHHhcCCCeEEEEEecCCCc-----------ccchHHHHHHHHHHcC
Confidence                    2356777788899999999987662           1234456888888887

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=88.57  E-value=0.41  Score=33.41  Aligned_cols=34  Identities=24%  Similarity=0.193  Sum_probs=23.5

Q ss_pred             CCeEEEecCCchhHHH-HHHHHHHc-CCeEEEEe-cCC
Q 023244            5 KGRVCVTGGTGFIASW-LIMRLLDH-GYSVTTTV-RSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~-l~~~L~~~-g~~V~~~~-r~~   39 (285)
                      +++|.|.|+ |.+|+. .+..|... +.+++++. ++.
T Consensus         1 Kiri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~   37 (164)
T d1tlta1           1 KLRIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTR   37 (164)
T ss_dssp             CEEEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSC
T ss_pred             CCEEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechh
Confidence            368999996 899975 46666543 66777665 444

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=88.49  E-value=0.13  Score=37.91  Aligned_cols=76  Identities=21%  Similarity=0.213  Sum_probs=50.1

Q ss_pred             CCCeEEEecC-CchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHhcC
Q 023244            4 GKGRVCVTGG-TGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAIAG   82 (285)
Q Consensus         4 ~~k~ilVtGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   82 (285)
                      ++++||=.|+ ||+.-.+|++.. ..| +|++++.++        .....+.......+++.++.+|..++......+..
T Consensus        56 pg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~--------~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~  125 (209)
T d1nt2a_          56 GDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSA--------KPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEK  125 (209)
T ss_dssp             SSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCH--------HHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCC
T ss_pred             CCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCH--------HHHHHHHHHhhccCCceEEEeeccCccccccccce
Confidence            4578998886 455555555433 445 899999987        33333222211234899999999998877766667


Q ss_pred             CCEEEEe
Q 023244           83 CTGVLHV   89 (285)
Q Consensus        83 ~d~vih~   89 (285)
                      +|+++|.
T Consensus       126 vd~v~~~  132 (209)
T d1nt2a_         126 VDLIYQD  132 (209)
T ss_dssp             EEEEEEC
T ss_pred             EEEEEec
Confidence            7888774

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=87.79  E-value=0.34  Score=34.55  Aligned_cols=76  Identities=21%  Similarity=0.178  Sum_probs=46.5

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCC--------------CCCCEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPG--------------ASERLRIFHAD   69 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D   69 (285)
                      ++++||..|+.  .|+ .+..|+++|++|++++.++        ......++...              ......++.+|
T Consensus        20 ~~~rvLd~GCG--~G~-~a~~la~~G~~V~gvD~S~--------~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d   88 (201)
T d1pjza_          20 PGARVLVPLCG--KSQ-DMSWLSGQGYHVVGAELSE--------AAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGD   88 (201)
T ss_dssp             TTCEEEETTTC--CSH-HHHHHHHHCCEEEEEEECH--------HHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEEC
T ss_pred             CCCEEEEecCc--CCH-HHHHHHHcCCceEeecccH--------HHHHHHHHHhccccchhhhhhhhhccccccceeccc
Confidence            46799999983  344 5667788899999999876        22222211100              13456788888


Q ss_pred             CCChhhHHHHhcCCCEEEEeccc
Q 023244           70 LSHPDGFDAAIAGCTGVLHVATP   92 (285)
Q Consensus        70 l~d~~~~~~~~~~~d~vih~a~~   92 (285)
                      ..+......  ...|.|+-....
T Consensus        89 ~~~l~~~~~--~~~D~i~~~~~l  109 (201)
T d1pjza_          89 FFALTARDI--GHCAAFYDRAAM  109 (201)
T ss_dssp             CSSSTHHHH--HSEEEEEEESCG
T ss_pred             ccccccccc--cceeEEEEEeee
Confidence            877554322  246777655443

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=87.70  E-value=0.22  Score=39.34  Aligned_cols=31  Identities=16%  Similarity=0.124  Sum_probs=27.8

Q ss_pred             EEEecCCchhHHHHHHHHHH-----cCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLD-----HGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~-----~g~~V~~~~r~~   39 (285)
                      |+|+|| |-.|..++..|++     .|++|+++.|++
T Consensus        10 V~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~   45 (360)
T d1pn0a1          10 VLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRS   45 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCC
Confidence            899999 9999999999963     699999999875

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=87.63  E-value=0.3  Score=35.75  Aligned_cols=31  Identities=23%  Similarity=0.073  Sum_probs=28.4

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++|+|| |+.|...+..+++.|.+|.++.++.
T Consensus         5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~~   35 (217)
T d1gesa1           5 YIAIGG-GSGGIASINRAAMYGQKCALIEAKE   35 (217)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            789999 9999999999999999999998754

>d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Cholesterol oxidase of GMC family
species: Brevibacterium sterolicum [TaxId: 1702]

Probab=87.36  E-value=0.25  Score=39.53  Aligned_cols=30  Identities=20%  Similarity=0.284  Sum_probs=27.6

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      ++|+|+ |+-|..++.+|++.|++|.++-+.
T Consensus        10 vIVVGs-G~aG~v~A~rLaeaG~~VlvLEaG   39 (370)
T d3coxa1          10 ALVIGS-GYGGAVAALRLTQAGIPTQIVEMG   39 (370)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCeEEEEeCC
Confidence            789987 999999999999999999999864

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=87.25  E-value=0.17  Score=36.32  Aligned_cols=35  Identities=9%  Similarity=0.014  Sum_probs=31.0

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +.+.|+|+|| |..|..-+..|++.|.+|+++.+..
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~   38 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME   38 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence            4568999999 9999999999999999999998755

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=87.09  E-value=0.3  Score=37.40  Aligned_cols=32  Identities=19%  Similarity=0.153  Sum_probs=29.0

Q ss_pred             eEEEecCCchhHHHHHHHHHHc-CCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~   39 (285)
                      -|+|+|| |.-|...+..|+++ |++|.++.+.+
T Consensus        35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCC
Confidence            3999999 99999999999874 99999999875

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=86.81  E-value=0.29  Score=38.90  Aligned_cols=30  Identities=27%  Similarity=0.348  Sum_probs=27.7

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      |+|+|+ |.-|.-++.+|++.|++|.++-+.
T Consensus         7 viIVGs-G~aG~v~A~~La~~G~kVlvLEaG   36 (379)
T d2f5va1           7 VVIVGS-GPIGCTYARELVGAGYKVAMFDIG   36 (379)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCEEEEECSS
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEecC
Confidence            889988 999999999999999999999764

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=86.36  E-value=0.37  Score=37.78  Aligned_cols=33  Identities=24%  Similarity=0.367  Sum_probs=22.2

Q ss_pred             CeEEEecC-Cc-hh--HHHHHHHHHHcCCeEEEEecC
Q 023244            6 GRVCVTGG-TG-FI--ASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGa-tG-~i--G~~l~~~L~~~g~~V~~~~r~   38 (285)
                      |||+|++| || -+  ...|+++|.++||+|..++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            57777764 32 21  223778998899999887754

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.19  E-value=0.068  Score=37.83  Aligned_cols=74  Identities=23%  Similarity=0.293  Sum_probs=41.0

Q ss_pred             CeEEEecCCchhHHHHHHH-HHHc-----CCeEEEEecCCCCccccCccchhhhhcCCC--CCCCEEEEecCCCChhhHH
Q 023244            6 GRVCVTGGTGFIASWLIMR-LLDH-----GYSVTTTVRSELDPEHRNSKDLSFLKNLPG--ASERLRIFHADLSHPDGFD   77 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~-L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~   77 (285)
                      |||.|.|| |.+|..++-. |+..     ..++.+++.++        ++.....+...  .........   +  .+..
T Consensus         1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~--------~k~~~~~d~~~~~~~~~~~~~~---t--~~~~   66 (162)
T d1up7a1           1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDE--------EKQKIVVDFVKRLVKDRFKVLI---S--DTFE   66 (162)
T ss_dssp             CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCH--------HHHHHHHHHHHHHHTTSSEEEE---C--SSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCc--------HHHHHHHHHHHhhhccCceEEE---e--cCcc
Confidence            58999999 5567666533 3321     35899999876        22222111100  001122211   1  2245


Q ss_pred             HHhcCCCEEEEecccC
Q 023244           78 AAIAGCTGVLHVATPV   93 (285)
Q Consensus        78 ~~~~~~d~vih~a~~~   93 (285)
                      +.++++|+||..|+..
T Consensus        67 ~~l~~aDvVVita~~~   82 (162)
T d1up7a1          67 GAVVDAKYVIFQFRPG   82 (162)
T ss_dssp             HHHTTCSEEEECCCTT
T ss_pred             cccCCCCEEEEecccC
Confidence            6678999999999864

>d1m6ia1 c.3.1.5 (A:128-263,A:401-477) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.18  E-value=0.37  Score=35.37  Aligned_cols=33  Identities=15%  Similarity=0.034  Sum_probs=27.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCC--eEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGY--SVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~   39 (285)
                      ..++|.|| |++|-.++..|.+.|+  +|+++++.+
T Consensus         5 ~~~vIvG~-G~aG~~~A~~Lr~~~~~~~I~li~~e~   39 (213)
T d1m6ia1           5 VPFLLIGG-GTAAFAAARSIRARDPGARVLIVSEDP   39 (213)
T ss_dssp             EEEEEESC-SHHHHHHHHHHHHHSTTCEEEEEESSS
T ss_pred             CCEEEECC-cHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence            46789988 9999999999988775  588887754

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=85.58  E-value=0.36  Score=37.75  Aligned_cols=31  Identities=19%  Similarity=0.146  Sum_probs=29.0

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|+ |..|...+..|+++|.+|+++.+.+
T Consensus        26 VvVIG~-G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGS-GGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECS-SHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899988 9999999999999999999998865

>d1ps9a2 c.3.1.1 (A:466-627) 2,4-dienoyl-CoA reductase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.36  E-value=0.2  Score=34.97  Aligned_cols=29  Identities=28%  Similarity=0.201  Sum_probs=25.3

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEE
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVT   33 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~   33 (285)
                      .+|+|+|.|| |++|..++..|++.|.++.
T Consensus        28 ~gkrVvVIGg-G~~g~d~a~~~~r~G~~~~   56 (162)
T d1ps9a2          28 VGNKVAIIGC-GGIGFDTAMYLSQPGESTS   56 (162)
T ss_dssp             CCSEEEEECC-HHHHHHHHHHHTCCSSCGG
T ss_pred             cCCceEEEcC-chhHHHHHHHHHHcCCccc
Confidence            4689999998 9999999999999987543

>d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain
species: Thermotoga maritima [TaxId: 2336]

Probab=85.20  E-value=0.66  Score=28.81  Aligned_cols=32  Identities=22%  Similarity=0.194  Sum_probs=26.2

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRS   38 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~   38 (285)
                      |||||.|+ |.=-.+|+..|.+..+++++.--+
T Consensus         1 MkVLviGs-GgREHAia~~l~~s~~~v~~~pGN   32 (90)
T d1vkza2           1 VRVHILGS-GGREHAIGWAFAKQGYEVHFYPGN   32 (90)
T ss_dssp             CEEEEEEC-SHHHHHHHHHHHHTTCEEEEEECC
T ss_pred             CEEEEECC-CHHHHHHHHHHhcCCCeEEEecCC
Confidence            68999988 777888999999888888876443

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=84.72  E-value=0.34  Score=35.81  Aligned_cols=34  Identities=18%  Similarity=0.130  Sum_probs=29.7

Q ss_pred             CCeEEEecCCchhHHHHHHHHHHcC-------CeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIASWLIMRLLDHG-------YSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~   39 (285)
                      ..+|+|+|| |.-|-..+.+|+++|       ++|+++.+.+
T Consensus         2 p~~VaVIGa-GpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~   42 (239)
T d1lqta2           2 PYYIAIVGS-GPSAFFAAASLLKAADTTEDLDMAVDMLEMLP   42 (239)
T ss_dssp             CEEEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEEEEESSS
T ss_pred             CcEEEEECc-CHHHHHHHHHHHHcCCccccCCCceEEEecCC
Confidence            358999998 999999999999987       4799998865

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=84.44  E-value=0.49  Score=34.46  Aligned_cols=31  Identities=19%  Similarity=0.283  Sum_probs=28.7

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++|+|| |..|...+..+++.|.+|+++.+..
T Consensus         6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence            789999 9999999999999999999998765

>d2gmha1 c.3.1.2 (A:4-236,A:336-482) Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Electron transfer flavoprotein-ubiquinone oxidoreductase, EFT-QO
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.25  E-value=0.33  Score=39.21  Aligned_cols=32  Identities=19%  Similarity=0.203  Sum_probs=29.1

Q ss_pred             eEEEecCCchhHHHHHHHHHH------cCCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLD------HGYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~------~g~~V~~~~r~~   39 (285)
                      =|+|+|| |--|...+..|++      .|++|.++.+..
T Consensus        34 DViIVGg-GPAGlsaA~~LA~l~~~~~~Gl~VlllEK~~   71 (380)
T d2gmha1          34 DVVIVGA-GPAGLSAATRLKQLAAQHEKDLRVCLVEKAA   71 (380)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred             CEEEECC-CHHHHHHHHHHHhhhhhhcCCCEEEEEcCCC
Confidence            3899999 9999999999987      799999999876

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.58  E-value=0.88  Score=34.00  Aligned_cols=34  Identities=18%  Similarity=0.255  Sum_probs=28.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHc-CCeEEEEecC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDH-GYSVTTTVRS   38 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~   38 (285)
                      .+|+|+|-|- |.+|+++++.|.++ |..|+++.-.
T Consensus        31 ~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          31 KGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            5689999988 99999999999864 8888877653

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.23  E-value=0.61  Score=34.34  Aligned_cols=35  Identities=20%  Similarity=0.156  Sum_probs=29.0

Q ss_pred             CCeEEEecCCchhHH-----HHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   39 (285)
                      +|.|.|+|+-|.+|.     +|+..|++.|++|.+++-+.
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D~   41 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL   41 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999999999886     56677888899999999664

>d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Leuconostoc mesenteroides [TaxId: 1245]

Probab=83.07  E-value=1.6  Score=31.38  Aligned_cols=92  Identities=17%  Similarity=0.251  Sum_probs=50.6

Q ss_pred             CCCCCCeEEEecCCchhHHHHHH----HHHHcC-----CeEEEEecCCCCccccCccchhhhhcCCC-------CCCCEE
Q 023244            1 MEEGKGRVCVTGGTGFIASWLIM----RLLDHG-----YSVTTTVRSELDPEHRNSKDLSFLKNLPG-------ASERLR   64 (285)
Q Consensus         1 M~~~~k~ilVtGatG~iG~~l~~----~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-------~~~~~~   64 (285)
                      |++..-.++|.||||=+.+.-.-    +|...|     ..|+++.|+..+...-.......+.+...       ...++.
T Consensus         1 ~~e~~t~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~~l~~~~~~~~~~~~~~~~~~   80 (195)
T d1h9aa1           1 VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFS   80 (195)
T ss_dssp             CCCCCEEEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHHHHGGGCSCHHHHHHHHTTEE
T ss_pred             CCCCceEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHHHHhhccchHhhHHHHhhccc
Confidence            56544445688999998875432    222333     47899999762111000000111111110       135788


Q ss_pred             EEecCCCChhhHHHHhc-----------CCCEEEEeccc
Q 023244           65 IFHADLSHPDGFDAAIA-----------GCTGVLHVATP   92 (285)
Q Consensus        65 ~~~~Dl~d~~~~~~~~~-----------~~d~vih~a~~   92 (285)
                      ++.+|+++++.+..+.+           ....++.+|-+
T Consensus        81 y~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~rifYLAvp  119 (195)
T d1h9aa1          81 YRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVA  119 (195)
T ss_dssp             EEECCTTCTTTHHHHHHHHHHHHHHHTCCSCEEEEECSC
T ss_pred             eeeEeeccHhhHHHHHHHHHHHHhhcCCCcceEEEEecC
Confidence            99999998875554322           23578888764

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.76  E-value=0.53  Score=36.70  Aligned_cols=31  Identities=19%  Similarity=0.134  Sum_probs=28.9

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|+ |..|...+.++++.|.+|+++.+.+
T Consensus        22 VvVIGa-G~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          22 VLVVGA-GSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            899988 9999999999999999999998865

>d1kdga1 c.3.1.2 (A:215-512,A:694-755) Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain {Fungus (Phanerochaete chrysosporium) [TaxId: 5306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Flavoprotein domain of flavocytochrome cellobiose dehydrogenase (CDH), FAD-binding domain
species: Fungus (Phanerochaete chrysosporium) [TaxId: 5306]

Probab=82.59  E-value=0.57  Score=37.35  Aligned_cols=31  Identities=23%  Similarity=0.144  Sum_probs=27.5

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++|+|+ |.-|.-++.+|++.|.+|.++-+..
T Consensus         5 ~IIVGs-G~aG~v~A~rLae~g~~VlvLEaG~   35 (360)
T d1kdga1           5 YIIVGA-GPGGIIAADRLSEAGKKVLLLERGG   35 (360)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHhhCCCeEEEEEccC
Confidence            688887 9999999999999999999997754

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.42  E-value=0.9  Score=33.48  Aligned_cols=79  Identities=15%  Similarity=0.059  Sum_probs=47.9

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhc-C------------------CCCCCCEE
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKN-L------------------PGASERLR   64 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~------------------~~~~~~~~   64 (285)
                      .+++||..|+..  | ..+..|+++|++|++++-++        ........ .                  .....++.
T Consensus        45 ~~~rvLd~GCG~--G-~~a~~LA~~G~~V~gvD~S~--------~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  113 (229)
T d2bzga1          45 SGLRVFFPLCGK--A-VEMKWFADRGHSVVGVEISE--------LGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNIS  113 (229)
T ss_dssp             CSCEEEETTCTT--C-THHHHHHHTTCEEEEECSCH--------HHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEE
T ss_pred             CCCEEEEeCCCC--c-HHHHHHHhCCCcEEEEeCCH--------HHHHHHHHHhhccccccchhcccccceeeecCCcEE
Confidence            356899999843  4 44777888999999999876        22111110 0                  01235788


Q ss_pred             EEecCCCChhhHHHHhcCCCEEEEecccCCC
Q 023244           65 IFHADLSHPDGFDAAIAGCTGVLHVATPVDF   95 (285)
Q Consensus        65 ~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~   95 (285)
                      ++.+|+.+.....  ....|+|+-.+.....
T Consensus       114 ~~~~d~~~l~~~~--~~~fd~i~~~~~l~~~  142 (229)
T d2bzga1         114 LYCCSIFDLPRTN--IGKFDMIWDRGALVAI  142 (229)
T ss_dssp             EEESCGGGGGGSC--CCCEEEEEESSSTTTS
T ss_pred             EEEcchhhccccc--cCceeEEEEEEEEEec
Confidence            8888886643211  1235777766655544

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=82.35  E-value=0.7  Score=31.87  Aligned_cols=31  Identities=16%  Similarity=0.029  Sum_probs=25.9

Q ss_pred             eEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            7 RVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ||-+.|- |.+|+.+++.|++.|+.+ +..|+.
T Consensus         2 kIg~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~   32 (156)
T d2cvza2           2 KVAFIGL-GAMGYPMAGHLARRFPTL-VWNRTF   32 (156)
T ss_dssp             CEEEECC-STTHHHHHHHHHTTSCEE-EECSST
T ss_pred             eEEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCH
Confidence            6889987 999999999999988765 566665

>d1neka2 c.3.1.4 (A:1-235,A:356-450) Succinate dehydogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Succinate dehydogenase
species: Escherichia coli [TaxId: 562]

Probab=82.32  E-value=0.48  Score=37.25  Aligned_cols=31  Identities=13%  Similarity=0.142  Sum_probs=28.7

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|.|+ |.-|...+.+++++|.+|+++.+.+
T Consensus        10 VlVVG~-G~AGl~AAl~aa~~G~~V~lleK~~   40 (330)
T d1neka2          10 AVVIGA-GGAGMRAALQISQSGQTCALLSKVF   40 (330)
T ss_dssp             CEEECC-SHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEeCCC
Confidence            899988 9999999999999999999998765

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=82.07  E-value=0.71  Score=32.44  Aligned_cols=31  Identities=13%  Similarity=0.039  Sum_probs=27.9

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      |+|+|| |..|-..+..+.+.|.+|.++.++.
T Consensus         4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~~~   34 (184)
T d1fl2a1           4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGERF   34 (184)
T ss_dssp             EEEECC-SHHHHHHHHHHHTTTCCEEEECSST
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCeEEEEEEec
Confidence            789998 9999999999999999999998643

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=81.84  E-value=0.67  Score=33.83  Aligned_cols=33  Identities=15%  Similarity=0.102  Sum_probs=29.4

Q ss_pred             CeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            6 GRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         6 k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      -.++|+|| |..|...+..+++.|.+|.++.+..
T Consensus         6 ~DlvVIG~-GpaGl~aA~~aa~~G~~V~liE~~~   38 (220)
T d1lvla1           6 TTLLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQA   38 (220)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred             cCEEEECC-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            45999997 9999999999999999999998754

>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Flavoproteins
family: Flavodoxin-related
domain: ROO-like flavoprotein TM0755, C-terminal domain
species: Thermotoga maritima [TaxId: 2336]

Probab=81.68  E-value=5.5  Score=26.59  Aligned_cols=62  Identities=15%  Similarity=0.137  Sum_probs=42.3

Q ss_pred             CeEEE-----ecCCchhHHHHHHHHHHcCCeEEEEecCCCCccccCccchhhhhcCCCCCCCEEEEecCCCChhhHHHHh
Q 023244            6 GRVCV-----TGGTGFIASWLIMRLLDHGYSVTTTVRSELDPEHRNSKDLSFLKNLPGASERLRIFHADLSHPDGFDAAI   80 (285)
Q Consensus         6 k~ilV-----tGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   80 (285)
                      .||+|     ||-|-.+...|++.|.+.|++|.+..-..                            .|..+...+..-+
T Consensus         4 ~kv~IiY~S~tGnTe~~A~~i~~~l~~~g~~v~~~~~~~----------------------------~~~~~~~~~~~~l   55 (148)
T d1vmea1           4 GKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSD----------------------------EERPAISEILKDI   55 (148)
T ss_dssp             TEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECS----------------------------SCCCCHHHHHHHS
T ss_pred             CEEEEEEECCCcHHHHHHHHHHHHHHhCCCeEEEEeccc----------------------------ccccchhHhhhhH
Confidence            45555     57788888899999988899887765543                            3334444444456


Q ss_pred             cCCCEEEEecccCCC
Q 023244           81 AGCTGVLHVATPVDF   95 (285)
Q Consensus        81 ~~~d~vih~a~~~~~   95 (285)
                      .+.|.++-.+.....
T Consensus        56 ~~~d~iiigspt~~~   70 (148)
T d1vmea1          56 PDSEALIFGVSTYEA   70 (148)
T ss_dssp             TTCSEEEEEECEETT
T ss_pred             HHCCEeEEEecccCC
Confidence            678988877765443

>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Glycosyl transferases group 1
domain: Glycogen synthase 1, GlgA
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=81.64  E-value=0.74  Score=38.06  Aligned_cols=23  Identities=35%  Similarity=0.371  Sum_probs=19.0

Q ss_pred             CchhH---HHHHHHHHHcCCeEEEEe
Q 023244           14 TGFIA---SWLIMRLLDHGYSVTTTV   36 (285)
Q Consensus        14 tG~iG---~~l~~~L~~~g~~V~~~~   36 (285)
                      +|.+|   +.|+++|+++||+|.++.
T Consensus        16 ~GGl~~vv~~La~~L~~~Gh~V~Vi~   41 (477)
T d1rzua_          16 TGGLADVVGALPIALEAHGVRTRTLI   41 (477)
T ss_dssp             SSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred             cCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence            47766   567899999999999985

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=81.44  E-value=0.64  Score=34.14  Aligned_cols=35  Identities=23%  Similarity=0.149  Sum_probs=29.5

Q ss_pred             CCeEEEecCCchhHH-----HHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ||.|.|+++-|.+|.     +|+..|+++|++|.+++-+.
T Consensus         1 ~kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           1 VRTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             CEEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             CEEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            478999999888885     56778888899999999876

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=80.33  E-value=0.93  Score=33.13  Aligned_cols=35  Identities=17%  Similarity=0.128  Sum_probs=31.6

Q ss_pred             CCCeEEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            4 GKGRVCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         4 ~~k~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      .+|+|+|.|+ |.-|.-+|.+|++.+.+++.+.|++
T Consensus        31 ~gK~V~VvG~-G~Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          31 SGQRVGVIGT-GSSGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHhhhcccccccccc
Confidence            4789999988 8899999999999999999888876

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.09  E-value=0.66  Score=35.11  Aligned_cols=34  Identities=21%  Similarity=0.176  Sum_probs=28.2

Q ss_pred             CCeEEEecCCchhHH-----HHHHHHHHcCCeEEEEecCC
Q 023244            5 KGRVCVTGGTGFIAS-----WLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         5 ~k~ilVtGatG~iG~-----~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ||+|.|+| =|.+|.     +|+..|++.|++|.+++-++
T Consensus         1 mr~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~   39 (269)
T d1cp2a_           1 MRQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDP   39 (269)
T ss_dssp             CEEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECT
T ss_pred             CCEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCC
Confidence            57899998 677775     56668888999999999987

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.07  E-value=1.1  Score=32.55  Aligned_cols=31  Identities=19%  Similarity=0.108  Sum_probs=28.0

Q ss_pred             EEEecCCchhHHHHHHHHHHcCCeEEEEecCC
Q 023244            8 VCVTGGTGFIASWLIMRLLDHGYSVTTTVRSE   39 (285)
Q Consensus         8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~   39 (285)
                      ++|+|| |..|...+..+++.|.+|.++.+..
T Consensus         6 viIIG~-GpaG~~aA~~aar~G~kV~vIEk~~   36 (221)
T d3grsa1           6 YLVIGG-GSGGLASARRAAELGARAAVVESHK   36 (221)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred             EEEECC-CHHHHHHHHHHHHCCCEEEEEeccC
Confidence            688888 9999999999999999999998754